BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004033
(778 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255540327|ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223550343|gb|EEF51830.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 759
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/782 (70%), Positives = 624/782 (79%), Gaps = 27/782 (3%)
Query: 1 MAPTVPIDFIGQKQSKKC-LTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSG 59
MAPTVPI+FIGQK+SKKC L+SQ MGKSRKYSKG SSGFVPDYRHAVET+ ESEGFGSSG
Sbjct: 1 MAPTVPIEFIGQKESKKCWLSSQPMGKSRKYSKGLSSGFVPDYRHAVETVGESEGFGSSG 60
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVDTEMTASEDS APKRKC+SL+ DG+D F VP+QVL+LSKMS+ ER++L+L+ K +LEQ
Sbjct: 61 RVDTEMTASEDSYAPKRKCMSLSFDGHDTFTVPMQVLSLSKMSRFERKNLKLRFKRELEQ 120
Query: 120 VRVLQKKVASLSSNVV-LSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNG 178
VR L KKVASL SN LSPSSDIRSC+DG KRP LE++ V AP+ KKR P GRNG
Sbjct: 121 VRFLYKKVASLGSNAAALSPSSDIRSCSDGLKRPPLETLHKSYAVSAPQSKKRGPPGRNG 180
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
+TKK + R EP+K A +SNAMLMKQCE LL+RLM HQ+ WVFN PVDV KLNIPD
Sbjct: 181 ARTKKSSHKRSEPEKLAAPVITSNAMLMKQCETLLSRLMLHQYAWVFNNPVDVEKLNIPD 240
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
YFTVIKHPMDLGT+K KIT+G YS PLAFAADVRLTFSNAM YNPP NDVH MA+TL KY
Sbjct: 241 YFTVIKHPMDLGTVKSKITTGAYSSPLAFAADVRLTFSNAMKYNPPGNDVHFMAETLSKY 300
Query: 299 FEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRV 358
FEVRWKAIEKKLPVT+ V RA +ETET++ P KKKK++ ++ +K EP R+V
Sbjct: 301 FEVRWKAIEKKLPVTIGAEPVAPRAGIHVETETKIDPTPAKKKKIAQIDSMVKLEPFRQV 360
Query: 359 MTNEEKRILSTELEALLEELPESIIDFLKEHSAG--ETGEDELEIDIDALSDDTLFALRK 416
M+NEEK LSTELEALL ELPE+IIDFLKEHS + GE E+EIDID LSDDTLF LRK
Sbjct: 361 MSNEEKLKLSTELEALLSELPETIIDFLKEHSHNDDQNGEVEIEIDIDTLSDDTLFELRK 420
Query: 417 LLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDI 476
LLDDYLLEK++ QA P EME+LNESG SNSS Q CKGN+ VDED+DI+G NDPPV+
Sbjct: 421 LLDDYLLEKRKNQAKAEPSEMELLNESGFSNSSWQPCKGNEPVDEDIDILGENDPPVSSY 480
Query: 477 PPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLV 536
PPV IEKDAA++NSKCSSSSSSSSES SSSD +SG E DAAKASVP + L
Sbjct: 481 PPVEIEKDAAHKNSKCSSSSSSSSES-GSSSDDSDSDNSGGESDAAKASVPYTVTKVYLD 539
Query: 537 SGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKL 596
+ L+ S N L ++E NSQG+P+ + DGH EGE+AP +RQVSPDKL
Sbjct: 540 NAIVLE-------------SANGLAKIESNSQGEPLNVETDGHQEGENAPPDRQVSPDKL 586
Query: 597 YRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEE 656
YRAA+LRNRFADTILKAREKALEKGEKRDPEKLR EREELER+ +EEKARLQAEAKAAEE
Sbjct: 587 YRAAILRNRFADTILKAREKALEKGEKRDPEKLRKEREELERQQKEEKARLQAEAKAAEE 646
Query: 657 ARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPS 716
A+RKA AEAAAEAKR+RELEREAARQALQ MEKTV+INENS+FMEDLEMLR A DE+LPS
Sbjct: 647 AQRKAAAEAAAEAKRQRELEREAARQALQQMEKTVEINENSQFMEDLEMLRTAHDEELPS 706
Query: 717 FTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGE 776
F E SP+ F QGS NPLEQLGLYMK DD++EE+VEPP + E IKDVEEGE
Sbjct: 707 FMEETSPE--------FVLQGS-NPLEQLGLYMKKDDEEEEDVEPPQSVSESIKDVEEGE 757
Query: 777 ID 778
ID
Sbjct: 758 ID 759
>gi|224136059|ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
gi|222869225|gb|EEF06356.1| global transcription factor group [Populus trichocarpa]
Length = 709
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/721 (70%), Positives = 569/721 (78%), Gaps = 43/721 (5%)
Query: 42 YRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKM 101
YRHAV TMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLN+D YD FGVP QVL+LSKM
Sbjct: 1 YRHAVHTMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNMDCYDTFGVPSQVLSLSKM 60
Query: 102 SQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDIRSCNDGQKRPLLESVGGP 160
S+ ER+ LE++LK +LEQVR+LQ+KVASLSSN V+LSPSSDIRSC+DGQKRP LE +
Sbjct: 61 SRPERKDLEMRLKKELEQVRILQRKVASLSSNTVLLSPSSDIRSCSDGQKRPPLEGLHSS 120
Query: 161 SVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ 220
V AP+ KKRAP RN TKKG S R EP KPA S AMLMKQCE LL RLM+HQ
Sbjct: 121 FEVSAPQSKKRAPPDRNRGHTKKGTSARSEPVKPAAPLGISTAMLMKQCEALLNRLMAHQ 180
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
FGW+F TPVDV+KLNIPDYFT+IKHPMDLGT+K KI SG+YS PL FAADVRLTFSNAM
Sbjct: 181 FGWIFKTPVDVVKLNIPDYFTIIKHPMDLGTVKSKIVSGEYSSPLGFAADVRLTFSNAMK 240
Query: 281 YNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGM----- 335
YNPP NDVH MA+TLRKYFEVRWK IEKKLPVT + ++PSR D IE ET + +
Sbjct: 241 YNPPGNDVHSMAETLRKYFEVRWKVIEKKLPVTTGVESMPSRIDVHIERETTVHIERETT 300
Query: 336 ---PPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHS-- 390
PP+KKKK++P + K+K EPVRRVM+N EK+ LS ELEALL ELPESII+FLKEHS
Sbjct: 301 TSAPPLKKKKITPSDNKVKPEPVRRVMSNAEKQKLSMELEALLGELPESIIEFLKEHSGN 360
Query: 391 AGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSM 450
AG+TGEDE+EIDIDAL DDTLF LRKLLD+Y+LEKQ+ Q+ PCEME+ N+
Sbjct: 361 AGQTGEDEIEIDIDALGDDTLFNLRKLLDNYILEKQKNQSKAEPCEMEL-------NTHS 413
Query: 451 QLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSD 510
GND V+ED+D+VGGNDPP++ PP+ IEKD AN+NSK SS S S+SESGSSSS +
Sbjct: 414 SCFLGNDTVEEDIDVVGGNDPPISSYPPIKIEKDEANKNSKRSSPSCSNSESGSSSSGYE 473
Query: 511 SGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSE-GVPDIGNSSVNSLDQVELNSQG 569
EP G N D+K+S+ D+GN SV+ LDQVEL+++G
Sbjct: 474 M------EP------------------GENADQKRSDPDDSDVGNQSVDGLDQVELDTEG 509
Query: 570 KPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKL 629
KPVA DGH EGESAPS+RQVSP+KLYRAALLRNRFADTILKAREKALEKGEK DPEKL
Sbjct: 510 KPVAAEVDGHQEGESAPSKRQVSPEKLYRAALLRNRFADTILKAREKALEKGEKCDPEKL 569
Query: 630 RIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEK 689
R E+EE ERR +EEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQAL MEK
Sbjct: 570 RKEKEEFERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALLEMEK 629
Query: 690 TVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYM 749
TVDINENS FMEDLEMLR DEQLPSF E SPD Q+ LGSFK QGS+NPLEQLGLYM
Sbjct: 630 TVDINENSHFMEDLEMLRTVHDEQLPSFIEETSPDLSQNCLGSFKLQGSSNPLEQLGLYM 689
Query: 750 K 750
K
Sbjct: 690 K 690
>gi|359491054|ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
[Vitis vinifera]
Length = 770
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/786 (68%), Positives = 619/786 (78%), Gaps = 24/786 (3%)
Query: 1 MAPTVPIDFIGQKQSKKCLT---SQMMGKSRKYSKGHSS-GFVPDYRHAVETMAESEGFG 56
MAPTVPI F GQ++SKK +QMM K+RK SKGHSS GFVPDYRHAVETM ESEGFG
Sbjct: 1 MAPTVPIGFTGQRESKKLSQKGLAQMMAKTRKVSKGHSSSGFVPDYRHAVETMGESEGFG 60
Query: 57 SSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTD 116
SSGRVDTEMTASEDSC PKRKCISLN+DGYD+F VP+QVL+LSKMS+ ERR LE +LK +
Sbjct: 61 SSGRVDTEMTASEDSCVPKRKCISLNVDGYDSFCVPVQVLSLSKMSRAERRDLERRLKME 120
Query: 117 LEQVRVLQKKVASLSSNVV-LSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPN- 174
L+QVR QKK+ASL SN+V LSP+SDIRSC++GQKRP + + S + KKR P
Sbjct: 121 LQQVRAFQKKIASLCSNLVPLSPTSDIRSCSNGQKRPPKDKIQKSSEASTHQRKKRPPPP 180
Query: 175 GRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKL 234
GRN P+ K+G SGR E K A +SN+MLMKQCE LL+RLM+HQFGW+FN PVDV++L
Sbjct: 181 GRNVPKMKRGLSGRFESVKQAAPPGTSNSMLMKQCETLLSRLMTHQFGWIFNNPVDVVEL 240
Query: 235 NIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADT 294
IPDYFTVIKHPMDLGTIK K+ SG+Y P FAADVRLTFSNAMTYNP NDVH MA+T
Sbjct: 241 KIPDYFTVIKHPMDLGTIKSKMASGEYLSPFDFAADVRLTFSNAMTYNPRGNDVHFMAET 300
Query: 295 LRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEP 354
L K+FE+RWK IEKKLPVT+D+ ++PSR+D +E ET MPP KKKKV+P + KIK EP
Sbjct: 301 LNKFFEMRWKPIEKKLPVTIDVESLPSRSDAHLEIETADRMPPSKKKKVAPTDHKIKMEP 360
Query: 355 VRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGET--GEDELEIDIDALSDDTLF 412
+R+MT EE+ L TELE LL ELP+ I+DFLKE S E EDE+EIDIDALSDDTLF
Sbjct: 361 NKRIMTKEERHNLGTELETLLGELPDDIVDFLKEQSFNENQASEDEIEIDIDALSDDTLF 420
Query: 413 ALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
LRKLLD YLLEKQ+ PCEME+ NESG SNSSMQ CKGND +DEDVDI GGNDPP
Sbjct: 421 TLRKLLDGYLLEKQKNLTKTEPCEMELRNESGFSNSSMQPCKGNDHLDEDVDI-GGNDPP 479
Query: 473 VTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVE 532
+ PP+ IEKDAA+RNS+CSSSS+SSS+SGSSSSDSDSGSSSG E D AKASVP + +
Sbjct: 480 TSSYPPIEIEKDAAHRNSRCSSSSTSSSDSGSSSSDSDSGSSSGGESDGAKASVPVTSTK 539
Query: 533 ENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVS 592
L + A L ++ +P V+ N + KP++ ADGH EGESAPSERQVS
Sbjct: 540 IYL-NPAILWITEALNIP----------CNVDPNLESKPISAEADGHQEGESAPSERQVS 588
Query: 593 PDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAK 652
P+KLYRAALLR+RFADTILKAREK LEKGEK DPEKLR+EREELERR +EEKARLQAEAK
Sbjct: 589 PEKLYRAALLRSRFADTILKAREKTLEKGEKGDPEKLRLEREELERRQKEEKARLQAEAK 648
Query: 653 AAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDE 712
AAEEAR+KAEAEAAAEAKRKREL+REAARQALQ M+KTVDINEN F++DLEMLR A E
Sbjct: 649 AAEEARKKAEAEAAAEAKRKRELDREAARQALQQMQKTVDINENCLFLKDLEMLRAAP-E 707
Query: 713 QLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDV 772
LPS E SPD + LGSFK QGS NPLEQLGLYMKMDD++EEEVEP P DV
Sbjct: 708 PLPSLD-ERSPDQSPNCLGSFKLQGS-NPLEQLGLYMKMDDEEEEEVEPQCIPG-PGNDV 764
Query: 773 EEGEID 778
EEGEID
Sbjct: 765 EEGEID 770
>gi|356516581|ref|XP_003526972.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 786
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/790 (65%), Positives = 608/790 (76%), Gaps = 16/790 (2%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGR 60
MAPT+PI+F GQK+S+K SQ MGKSRKYSKG+++GFVPD+RHAVET+ ESEG GS GR
Sbjct: 1 MAPTLPIEFAGQKESRKYSHSQNMGKSRKYSKGYATGFVPDFRHAVETIDESEGLGSLGR 60
Query: 61 VDTEMTASEDSCAPKRKCISLNIDGYD---NFGVPLQVLTLSKMSQTERRSLELKLKTDL 117
VD E+TA DSCAPKRK LN G D +F VP + +LS MS ER+ L+++L +L
Sbjct: 61 VDMELTALADSCAPKRKRPGLNTCGGDYAGSFNVPFRHFSLSAMSGFERKDLKVRLTWEL 120
Query: 118 EQVRVLQKKVASLSSNVV--LSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNG 175
EQVR QKK+ ++S+VV LS SDIR C+ GQKRP LES V P GKKR G
Sbjct: 121 EQVREFQKKIDGMNSSVVGGLSLFSDIRGCSAGQKRPKLESQHSTMEVSVPPGKKRPVPG 180
Query: 176 RNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLN 235
NGP++KK S RLE KPA A +S AMLMK CEN+L RLMSHQF WVFN PVDV+KLN
Sbjct: 181 HNGPKSKKSMSERLEHAKPA-APVTSYAMLMKSCENVLNRLMSHQFAWVFNDPVDVVKLN 239
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
IPDYFTVIKHPMDLGT+K +ITSG+YS+P+ FAADVRLTF NAM YNP NDVHIMA+TL
Sbjct: 240 IPDYFTVIKHPMDLGTVKKRITSGEYSNPMDFAADVRLTFDNAMFYNPAGNDVHIMAETL 299
Query: 296 RKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPV 355
K+FE RWKAIEKK+PV + + PSR +ETE +PP KKKK++P ++ +K EPV
Sbjct: 300 SKFFETRWKAIEKKIPVIDCVASEPSRPT-RVETEISDRVPPTKKKKITPNDSSVKPEPV 358
Query: 356 RRVMTNEEKRILSTELEALLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFA 413
+R++T EEK+ LS ELE ++ ELP+SI+DFL+E S G+T +DE+EIDID LSDDTLF
Sbjct: 359 KRIVTVEEKQKLSLELETMIGELPDSIVDFLREQSYNEGQTNDDEIEIDIDTLSDDTLFK 418
Query: 414 LRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPV 473
LRKLLDDY+LEKQ+ QA G CEME+LNESG SNSSMQ CKGN+ V+EDVDIVGGNDPP+
Sbjct: 419 LRKLLDDYMLEKQKSQAKAGQCEMELLNESGFSNSSMQPCKGNEQVEEDVDIVGGNDPPI 478
Query: 474 TDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEE 533
++ P + IE D RNSKCSSSSSSSSESGSSSSDSDS SSSGSE D AK S P +A +E
Sbjct: 479 SNYPSLEIENDVTKRNSKCSSSSSSSSESGSSSSDSDSVSSSGSELDMAKTSEPLSATKE 538
Query: 534 NLVSGANLDEKKSE-GVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVS 592
N+ G D+ K + G + G S N QVE +SQ +PVA + H EGESA S+RQVS
Sbjct: 539 NIGFGLTSDQNKGDPGNSETGKDSTNVGGQVEESSQSRPVATEPESHQEGESAASKRQVS 598
Query: 593 PDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAK 652
P+KLYRAALLR+RFADTILKA+EKALEK EKRDPEKLRIERE+LERR +EEKARLQAEAK
Sbjct: 599 PEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREDLERRQKEEKARLQAEAK 658
Query: 653 AAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDE 712
AAEEA+RKAEAEAAAEAKRKRELEREAARQALQ MEKTVDINENS+F+EDLEML DE
Sbjct: 659 AAEEAQRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINENSQFLEDLEMLSAVHDE 718
Query: 713 QLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVE----PPLTAKEP 768
LPSF E S D QD LG K QG NPLEQLGLYMK +D++E+E E PP A P
Sbjct: 719 HLPSFKEETSTDQPQDGLGGIKLQG--NPLEQLGLYMKDEDEEEDEEEEDELPPSGAVGP 776
Query: 769 IKDVEEGEID 778
DVEEGEID
Sbjct: 777 SNDVEEGEID 786
>gi|356508786|ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 781
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/787 (66%), Positives = 606/787 (77%), Gaps = 15/787 (1%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGR 60
MAPTVPI+F GQK+S+K SQ MGKSRKYSKG+++GFVPD+RHAVETM ESEG GS GR
Sbjct: 1 MAPTVPIEFAGQKESRKYSHSQNMGKSRKYSKGYATGFVPDFRHAVETMGESEGLGSLGR 60
Query: 61 VDTEMTASEDSCAPKRKCISLNID--GYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLE 118
VDTE+TA DSCAPK K LN GY +F VP Q +LS MS ER+ L+++L +LE
Sbjct: 61 VDTELTALADSCAPKGKRPGLNAGDGGYGSFDVPFQHFSLSAMSGFERKDLKVRLTWELE 120
Query: 119 QVRVLQKKVASLSSNVV-LSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRN 177
QVR +KK+ ++SNVV LS SSDI SC+ GQKRP LES V P GKKR G
Sbjct: 121 QVREFRKKIDGMNSNVVGLSLSSDIMSCSAGQKRPKLESQHRTMEVSVPHGKKRPLPGHT 180
Query: 178 GPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
GP+ KK SG LE KPA A +S A LMK CEN+L RLMSHQFGWVFNTPVDV+KLNIP
Sbjct: 181 GPKLKKSMSGHLEYAKPA-APVTSYATLMKLCENVLNRLMSHQFGWVFNTPVDVVKLNIP 239
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYFTVIKHPMDLGT+K +ITSG+YS+P+ FAADVRLTF NAM YNP NDVHIMA+TL K
Sbjct: 240 DYFTVIKHPMDLGTVKKRITSGEYSNPMDFAADVRLTFENAMFYNPAGNDVHIMAETLSK 299
Query: 298 YFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRR 357
+FE RWKAIEKK+P + + PSR +ETE +PP KKKK++P +T +K EPV+R
Sbjct: 300 FFETRWKAIEKKIPAIDSVASEPSRPTH-VETEISDRVPPTKKKKITPNDTNVKPEPVKR 358
Query: 358 VMTNEEKRILSTELEALLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALR 415
+MT EEK+ LS ELE ++ ELP+SI DFL+E S G+ +DE+EIDIDALSDDTLF LR
Sbjct: 359 IMTVEEKQKLSLELETMIGELPDSISDFLREQSYNEGQINDDEIEIDIDALSDDTLFKLR 418
Query: 416 KLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTD 475
KLLDDY+LEKQ+ A G CEME+LNESG SNSSMQ KG + V+EDVDI+GGNDPP+++
Sbjct: 419 KLLDDYMLEKQKSLAKAGQCEMELLNESGFSNSSMQPHKGEEQVEEDVDIIGGNDPPISN 478
Query: 476 IPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENL 535
PP+ IEKD NRNSKCSS SSSSSESGSSSSDSDSGSSSGSE D AK S P +A +EN+
Sbjct: 479 YPPLEIEKDVTNRNSKCSSLSSSSSESGSSSSDSDSGSSSGSELDMAKTSEPLSATKENV 538
Query: 536 VSGANLDEKKSEGVP---DIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVS 592
G +L +++G P + G S N QVE +SQ VA + H +GESA S+RQVS
Sbjct: 539 --GFDLTSDQNKGDPGNSETGKDSTNVGGQVEQSSQSGHVATEPESHQDGESAASKRQVS 596
Query: 593 PDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAK 652
P+KLYRAALLR+RFADTILKA+EKALEK EKRDPEKLRIERE+LERR +EEKARLQAEAK
Sbjct: 597 PEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREDLERRQKEEKARLQAEAK 656
Query: 653 AAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDE 712
AAEEA+RKAEAEAAAEAKRKRELEREAARQALQ MEKTVDINENS F+EDLEML DE
Sbjct: 657 AAEEAQRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINENSHFLEDLEMLSAVHDE 716
Query: 713 QLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLT-AKEPIKD 771
LPSF E S D QD LG K QG NPLEQLGLYMK ++++EEE EPP + A P D
Sbjct: 717 HLPSFKEETSADQPQDGLGGIKLQG--NPLEQLGLYMKEEEEEEEEEEPPPSGAAGPSND 774
Query: 772 VEEGEID 778
VEEGEID
Sbjct: 775 VEEGEID 781
>gi|356513665|ref|XP_003525531.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 739
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/761 (61%), Positives = 575/761 (75%), Gaps = 28/761 (3%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNI 83
MGKSRKYSKGH++GFVPD+RHAVETM ESEG G+ GRVD E+T SE SCAPKRK +
Sbjct: 1 MGKSRKYSKGHATGFVPDFRHAVETMGESEGLGNLGRVDNELTMSEISCAPKRKRVD--- 57
Query: 84 DGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVV-LSPSSDI 142
++F VP Q+L+L+KM+++ R+ L L+LK++LE+VR LQKK+A +SS LSP SDI
Sbjct: 58 ---ESFDVPFQLLSLTKMARSGRKDLTLRLKSELEEVRKLQKKIAGMSSITTELSPYSDI 114
Query: 143 RSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSN 202
RSC+ G+KRP LES LA GKKR NGP+TK+ SGR K A + S
Sbjct: 115 RSCSVGEKRPPLES-------LALHGKKRPLLKHNGPKTKRSISGRFISAKSAAPVTPSY 167
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A+LMKQCE LL R+MSHQFG VF+ PVD++K NIPDYFT+IKHPMDLGT+K K+ S +Y+
Sbjct: 168 AVLMKQCETLLKRVMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMDLGTVKSKLISCEYT 227
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
+ FAADVRLTFSNAM+YNPP NDVH+MA+TL KYFE RWK IEK L + D+ + PS+
Sbjct: 228 SLMDFAADVRLTFSNAMSYNPPGNDVHVMAETLSKYFETRWKPIEKILAID-DVPSEPSK 286
Query: 323 ADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESI 382
IE ++ + PP+KKKK++P T +K EP++R+MT EEK+ LS EL+A + ELPE+I
Sbjct: 287 PTTCIE-KSEIVDPPVKKKKITPNGTNVKPEPIKRIMTGEEKQKLSMELDASVVELPENI 345
Query: 383 IDFLKEHS--AGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVL 440
IDFLKE S A + +DE+EIDIDALSDDTLF LRKLLDD++LEKQ+ A PGPCE++
Sbjct: 346 IDFLKEQSYNASQINDDEIEIDIDALSDDTLFKLRKLLDDFMLEKQKTLAKPGPCEIQPA 405
Query: 441 NESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSS 500
NESG SNS +Q C+GN+ ++E+VDIVGG+DPP+ PP IE N K S SSSSS
Sbjct: 406 NESGFSNS-LQQCEGNEPIEEEVDIVGGDDPPLPSYPPAEIENGGTN---KTSEHSSSSS 461
Query: 501 ESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSL 560
S S SS SDS S S SEP AKAS N ++E + SG ++D+K EG D + ++S+
Sbjct: 462 SSESGSSSSDSDSESDSEPGIAKASDHFNPMKEKVGSGLSIDQK--EGNLDNSETEIDSM 519
Query: 561 D---QVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKA 617
+ VE +SQ V+ + H EGE+APS++QVSPDKLYRAALLR+RFADTILKA+EK
Sbjct: 520 NAAGHVEQSSQTDSVSDEPENHQEGENAPSKKQVSPDKLYRAALLRSRFADTILKAQEKT 579
Query: 618 LEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELER 677
LEKG+K DPEKLR+ER+ELERR +EEKARLQAEAKAAEE RRKAEAEAA EAKRKRELER
Sbjct: 580 LEKGDKWDPEKLRMERKELERRQKEEKARLQAEAKAAEEVRRKAEAEAATEAKRKRELER 639
Query: 678 EAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQG 737
EAARQALQ MEKT+ I+E+S+F+EDLEML DE LP+FT E SPDHL++ LGSFK QG
Sbjct: 640 EAARQALQKMEKTIGISESSQFLEDLEMLSGLLDEHLPNFTEERSPDHLENGLGSFKLQG 699
Query: 738 STNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
S NPLEQLGLYMK D+++EEE P T +E DVEEGEI+
Sbjct: 700 SCNPLEQLGLYMKADEEEEEEEMPQSTTRE-TNDVEEGEIN 739
>gi|449440580|ref|XP_004138062.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
gi|449501388|ref|XP_004161353.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
Length = 781
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/784 (65%), Positives = 609/784 (77%), Gaps = 9/784 (1%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGR 60
MAPTVPI+F GQK+S+K SQ MGKSRKYSKG S GFVPDYRHAVET+ ESEGFGSSGR
Sbjct: 1 MAPTVPIEFAGQKESRKYSLSQAMGKSRKYSKGLSFGFVPDYRHAVETVGESEGFGSSGR 60
Query: 61 VDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQV 120
+DT ++ +DS A KRK IS+N DGYD FG PLQV +LS +S++ER+ LEL+LK +LEQV
Sbjct: 61 MDTGISTLDDSRAIKRKRISMNADGYDCFGAPLQVFSLSTLSRSERKDLELRLKLELEQV 120
Query: 121 RVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKR-APNGRNGP 179
R+LQK+ +++SSN +S SS+I+S +D + E++ + P KK+ P+GRNGP
Sbjct: 121 RLLQKRASNVSSNFAVSSSSNIQSSSDQHRGAPPETLNRLNEASVPPAKKQLVPSGRNGP 180
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDY 239
K+ +SGR E KPA ++SS A L KQCE LL RLMSH FGWVFNTPVDV+KLNIPDY
Sbjct: 181 SAKRSSSGRFESAKPAAVSASSTASL-KQCEQLLQRLMSHTFGWVFNTPVDVVKLNIPDY 239
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FTVIKHPMDLGT+K K+T+G+Y+ PL FAADVRLTFSNAMTYNPP NDVH MA TL K+F
Sbjct: 240 FTVIKHPMDLGTVKSKLTAGEYTHPLDFAADVRLTFSNAMTYNPPANDVHTMAKTLSKFF 299
Query: 300 EVRWKAIEKKLPVTV-DMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRV 358
EVRWK IEKK P T + VPS E E+ + +PP KK K + ++ V +V
Sbjct: 300 EVRWKTIEKKFPTTTEEQRQVPSATTVPKEAESALPVPPPKKTKFPTNDPDVQPTSVVKV 359
Query: 359 MTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKL 417
MT++EK LS ELEALL ELPESII+FLKEHS+ + GEDE+EIDIDALSDDTLFALRKL
Sbjct: 360 MTDQEKHKLSVELEALLGELPESIINFLKEHSSNSQAGEDEIEIDIDALSDDTLFALRKL 419
Query: 418 LDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIP 477
LDDY++EK QK PC +E+ NESG SNSSM KGND +DEDVDI+GGNDPPV+ P
Sbjct: 420 LDDYMMEK-QKCTKAEPCVVELHNESGFSNSSMPPSKGNDPIDEDVDILGGNDPPVSSYP 478
Query: 478 PVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVS 537
P+ IEKDA R+SKCS+SSSSSSESGSSSSDS + S SGSE +AAKA A +E L
Sbjct: 479 PIEIEKDAVRRDSKCSNSSSSSSESGSSSSDSGTESLSGSESNAAKALESNVAPKEILCF 538
Query: 538 GANLDEKKSE-GVPDIGNSSVNSLDQVELNSQGKPVAIVADGHH-EGESAPSERQVSPDK 595
N+D+K+ E G +IGN N + V+ ++ I D + EGESAPS+RQVSPD+
Sbjct: 539 ETNVDQKQCELGDLEIGNYEENEIGLVDQTAEANTNTIEPDSYQEEGESAPSKRQVSPDR 598
Query: 596 LYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAE 655
LYRAALLRNRFADTILKAREKALEKG+KRDPEK+R+EREELER+ REEKARLQAEAKAAE
Sbjct: 599 LYRAALLRNRFADTILKAREKALEKGDKRDPEKVRMEREELERQQREEKARLQAEAKAAE 658
Query: 656 EARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLP 715
+ARRKAEAEAAAEAK+KREL+REAARQAL MEKTVDINENS+FMEDLEMLR + DE LP
Sbjct: 659 DARRKAEAEAAAEAKKKRELDREAARQALLKMEKTVDINENSQFMEDLEMLRASNDELLP 718
Query: 716 SFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKM-DDDDEEEVEPPLTAKEPIKDVEE 774
+FT E+SP+H Q+ GSFK QGS NPLEQLGLYMK+ ++D+EEE EPP + + DVEE
Sbjct: 719 NFTEESSPEHSQNGFGSFKLQGS-NPLEQLGLYMKVDEEDEEEESEPPQSVNKAANDVEE 777
Query: 775 GEID 778
GEID
Sbjct: 778 GEID 781
>gi|297734375|emb|CBI15622.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/758 (66%), Positives = 572/758 (75%), Gaps = 61/758 (8%)
Query: 24 MGKSRKYSKGHSS-GFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLN 82
M K+RK SKGHSS GFVPDYRHAVETM ESEGFGSSGRVDTEMTASEDSC PKRKCISLN
Sbjct: 1 MAKTRKVSKGHSSSGFVPDYRHAVETMGESEGFGSSGRVDTEMTASEDSCVPKRKCISLN 60
Query: 83 IDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDI 142
+DGYD+F VP+QVL+LSKMS+ ERR LE +LK +L+QVR QKK+ASL + SS+
Sbjct: 61 VDGYDSFCVPVQVLSLSKMSRAERRDLERRLKMELQQVRAFQKKIASLYK---IQKSSEA 117
Query: 143 RSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSN 202
S + +KRP P GRN P+ K+G SGR E K A +SN
Sbjct: 118 -STHQRKKRP-------------------PPPGRNVPKMKRGLSGRFESVKQAAPPGTSN 157
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+MLMKQCE LL+RLM+HQFGW+FN PVDV++L IPDYFTVIKHPMDLGTIK K+ SG+Y
Sbjct: 158 SMLMKQCETLLSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGEYL 217
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
P FAADVRLTFSNAMTYNP NDVH MA+TL K+FE+RWK IEKKLP
Sbjct: 218 SPFDFAADVRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLP----------- 266
Query: 323 ADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESI 382
KV+P + KIK EP +R+MT EE+ L TELE LL ELP+ I
Sbjct: 267 -------------------KVAPTDHKIKMEPNKRIMTKEERHNLGTELETLLGELPDDI 307
Query: 383 IDFLKEHSAGET--GEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVL 440
+DFLKE S E EDE+EIDIDALSDDTLF LRKLLD YLLEKQ+ PCEME+
Sbjct: 308 VDFLKEQSFNENQASEDEIEIDIDALSDDTLFTLRKLLDGYLLEKQKNLTKTEPCEMELR 367
Query: 441 NESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSS 500
NESG SNSSMQ CKGND +DEDVDI GGNDPP + PP+ IEKDAA+RNS+CSSSS+SSS
Sbjct: 368 NESGFSNSSMQPCKGNDHLDEDVDI-GGNDPPTSSYPPIEIEKDAAHRNSRCSSSSTSSS 426
Query: 501 ESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSL 560
+SGSSSSDSDSGSSSG E D AKASVP + +E + SGA+LD KKS+ DIGN ++N
Sbjct: 427 DSGSSSSDSDSGSSSGGESDGAKASVPVTSTKETVASGADLDPKKSDLGEDIGNEALNIP 486
Query: 561 DQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEK 620
V+ N + KP++ ADGH EGESAPSERQVSP+KLYRAALLR+RFADTILKAREK LEK
Sbjct: 487 CNVDPNLESKPISAEADGHQEGESAPSERQVSPEKLYRAALLRSRFADTILKAREKTLEK 546
Query: 621 GEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAA 680
GEK DPEKLR+EREELERR +EEKARLQAEAKAAEEAR+KAEAEAAAEAKRKREL+REAA
Sbjct: 547 GEKGDPEKLRLEREELERRQKEEKARLQAEAKAAEEARKKAEAEAAAEAKRKRELDREAA 606
Query: 681 RQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTN 740
RQALQ M+KTVDINEN F++DLEMLR A E LPS E SPD + LGSFK QGS N
Sbjct: 607 RQALQQMQKTVDINENCLFLKDLEMLRAAP-EPLPSLD-ERSPDQSPNCLGSFKLQGS-N 663
Query: 741 PLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
PLEQLGLYMKMDD++EEEVEP P DVEEGEID
Sbjct: 664 PLEQLGLYMKMDDEEEEEVEPQCIPG-PGNDVEEGEID 700
>gi|296090258|emb|CBI40077.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/747 (59%), Positives = 529/747 (70%), Gaps = 45/747 (6%)
Query: 38 FVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLT 97
F Y A E ESEG GSSGRVD E+ ASEDSC P RKCI+LN + D+F VP+QVL
Sbjct: 7 FPGGYYRAFENQGESEGSGSSGRVDMEIAASEDSCVPMRKCINLNSNNCDSFSVPIQVLP 66
Query: 98 LSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDIRSCNDGQKRPLLES 156
LS +S +ER+ L L+L+ +LEQ+R+LQKKV +N V LS SSDI R LE
Sbjct: 67 LSNISPSERKDLVLRLRMELEQIRLLQKKVDLQRTNGVALSSSSDIL-------RKKLEP 119
Query: 157 VGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRL 216
+G K RA N +G SGR E A A S+++ +LMKQCE LL +L
Sbjct: 120 LGN---------KNRAWN--------RGTSGRFESATQASAPSTASVLLMKQCETLLKQL 162
Query: 217 MSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFS 276
MSHQ GWVFN PVD++KLNIPDYFT+IKHPMDLGTIK KI SG YS PL FAADVRLTFS
Sbjct: 163 MSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSPLDFAADVRLTFS 222
Query: 277 NAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMP 336
NA T+NPP NDVH MADTL K+FEVRWK IEKKLPVT ++P + E +T MP
Sbjct: 223 NAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVT-KTQSLPGKYGTHGEMKTAKPMP 281
Query: 337 PMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG--ET 394
P KK+KV+ ++ EPV++VMT +EKR L +LE LL E+P IIDFL+ HS+ ET
Sbjct: 282 PSKKRKVTSTHHEVIQEPVQKVMTADEKRNLGRDLEDLLGEIPVQIIDFLRVHSSNGRET 341
Query: 395 GED-ELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLC 453
GED E+E+DI+ALSDDTLF LRKLLDDYL EKQ+ PCE+E+L++SG SNSS+Q C
Sbjct: 342 GEDDEIEVDIEALSDDTLFTLRKLLDDYLQEKQKSHGKAEPCEIELLHDSGPSNSSIQPC 401
Query: 454 KGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGS 513
KGND V+ED+DIVG N+ PV+ PPV IEKD +R+SKC S S S SSS
Sbjct: 402 KGNDPVEEDIDIVG-NEAPVSSYPPVEIEKDTEHRSSKCVLSRSFSEPDNSSSE------ 454
Query: 514 SSGSEPDAAKASVPANAVE--ENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKP 571
SE D AK S P N E E+L SGA LDEK S G P N SV+ +DQ+E SQ KP
Sbjct: 455 ---SELDGAKTSKPVNISEGQESLDSGALLDEKTSAGNPCEENQSVSGVDQLEQTSQQKP 511
Query: 572 VAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRI 631
+ +D +GES ++RQVSP+KLYRAA+L+NRFADTI KAREK L +GEK DPEKLR
Sbjct: 512 NYVESDSQQDGESL-TDRQVSPEKLYRAAVLKNRFADTIFKAREKTLNQGEKGDPEKLRR 570
Query: 632 EREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTV 691
EREELE + R+EKARLQAEAKAAE+ARR+AEAEAAAEAK+KRELER AARQALQ MEKTV
Sbjct: 571 EREELEMQRRKEKARLQAEAKAAEDARRRAEAEAAAEAKKKRELERAAARQALQKMEKTV 630
Query: 692 DINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKM 751
+INENSRF+EDLE+LR A E LPS E SPDH QD L F+F GS NPLEQLGLYMK+
Sbjct: 631 EINENSRFLEDLELLRAAPAEHLPSSVDETSPDHSQDGLSGFRFVGS-NPLEQLGLYMKV 689
Query: 752 DDDDEEEVEPPLTAKEPIKDVEEGEID 778
DDEEE P + + + DVEEGEID
Sbjct: 690 --DDEEEDGEPHSPPDVVNDVEEGEID 714
>gi|359488601|ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
Length = 739
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/747 (60%), Positives = 539/747 (72%), Gaps = 20/747 (2%)
Query: 38 FVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLT 97
F Y A E ESEG GSSGRVD E+ ASEDSC P RKCI+LN + D+F VP+QVL
Sbjct: 7 FPGGYYRAFENQGESEGSGSSGRVDMEIAASEDSCVPMRKCINLNSNNCDSFSVPIQVLP 66
Query: 98 LSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDIRSCNDGQKRPLLES 156
LS +S +ER+ L L+L+ +LEQ+R+LQKKV +N V LS SSDI SC++GQ R +++
Sbjct: 67 LSNISPSERKDLVLRLRMELEQIRLLQKKVDLQRTNGVALSSSSDILSCSNGQ-RGHVDN 125
Query: 157 VGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRL 216
S + + GKK P G +G SGR E A A S+++ +LMKQCE LL +L
Sbjct: 126 GRKSSALTSGPGKKLEPLGNKNRAWNRGTSGRFESATQASAPSTASVLLMKQCETLLKQL 185
Query: 217 MSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFS 276
MSHQ GWVFN PVD++KLNIPDYFT+IKHPMDLGTIK KI SG YS PL FAADVRLTFS
Sbjct: 186 MSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSPLDFAADVRLTFS 245
Query: 277 NAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMP 336
NA T+NPP NDVH MADTL K+FEVRWK IEKKLPVT ++P + E +T MP
Sbjct: 246 NAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVT-KTQSLPGKYGTHGEMKTAKPMP 304
Query: 337 PMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG--ET 394
P KK+KV+ ++ EPV++VMT +EKR L +LE LL E+P IIDFL+ HS+ ET
Sbjct: 305 PSKKRKVTSTHHEVIQEPVQKVMTADEKRNLGRDLEDLLGEIPVQIIDFLRVHSSNGRET 364
Query: 395 GED-ELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLC 453
GED E+E+DI+ALSDDTLF LRKLLDDYL EKQ+ PCE+E+L++SG SNSS+Q C
Sbjct: 365 GEDDEIEVDIEALSDDTLFTLRKLLDDYLQEKQKSHGKAEPCEIELLHDSGPSNSSIQPC 424
Query: 454 KGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGS 513
KGND V+ED+DIVG N+ PV+ PPV IEKD +R+SKC S S S S +SS
Sbjct: 425 KGNDPVEEDIDIVG-NEAPVSSYPPVEIEKDTEHRSSKCVLSRSFSGNSSYNSSSE---- 479
Query: 514 SSGSEPDAAKASVPANAVE--ENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKP 571
SE D AK S P N E E+L SGA LDEK S G P N SV+ +DQ+E SQ KP
Sbjct: 480 ---SELDGAKTSKPVNISEGQESLDSGALLDEKTSAGNPCEENQSVSGVDQLEQTSQQKP 536
Query: 572 VAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRI 631
+ +D +GES ++RQVSP+KLYRAA+L+NRFADTI KAREK L +GEK DPEKLR
Sbjct: 537 NYVESDSQQDGESL-TDRQVSPEKLYRAAVLKNRFADTIFKAREKTLNQGEKGDPEKLRR 595
Query: 632 EREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTV 691
EREELE + R+EKARLQAEAKAAE+ARR+AEAEAAAEAK+KRELER AARQALQ MEKTV
Sbjct: 596 EREELEMQRRKEKARLQAEAKAAEDARRRAEAEAAAEAKKKRELERAAARQALQKMEKTV 655
Query: 692 DINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKM 751
+INENSRF+EDLE+LR A E LPS E SPDH QD L F+F GS NPLEQLGLYMK+
Sbjct: 656 EINENSRFLEDLELLRAAPAEHLPSSVDETSPDHSQDGLSGFRFVGS-NPLEQLGLYMKV 714
Query: 752 DDDDEEEVEPPLTAKEPIKDVEEGEID 778
DDEEE P + + + DVEEGEID
Sbjct: 715 --DDEEEDGEPHSPPDVVNDVEEGEID 739
>gi|224121914|ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
gi|222859377|gb|EEE96924.1| global transcription factor group [Populus trichocarpa]
Length = 613
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/704 (59%), Positives = 489/704 (69%), Gaps = 103/704 (14%)
Query: 87 DNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCN 146
D FGVP Q+L+LSKMS+ ER+ LE++LK DLEQVR+L +KVASLS + RS
Sbjct: 1 DTFGVPSQILSLSKMSRPERKDLEIRLKNDLEQVRILHRKVASLSVH---------RSFE 51
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
V APK KKRAP GRNG ++KKG SGR EP K A +NAMLM
Sbjct: 52 ----------------VSAPKSKKRAPPGRNGARSKKGTSGRFEPVKSAAPLGITNAMLM 95
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
KQCE LL RLM+HQFGW+FNTPVDV+K+NIPDYFT+IKHPMDLGT+K +I SG+YS PL
Sbjct: 96 KQCETLLNRLMTHQFGWIFNTPVDVVKMNIPDYFTIIKHPMDLGTVKSRIISGEYSSPLG 155
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRAD-- 324
FAADVRLTF+NAM YNPP ND H MA+TL K+FEVRWK IEKK+PVT D+ VPSRAD
Sbjct: 156 FAADVRLTFANAMKYNPPGNDFHFMAETLSKFFEVRWKVIEKKIPVTADVEPVPSRADVR 215
Query: 325 ------DMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEEL 378
IE ET PP+KKKK++P + K+K P+R+VMTNEE++ LS ELEALL EL
Sbjct: 216 MEMETTAHIEKETTTDTPPLKKKKITPSDNKVKPGPIRKVMTNEERQKLSMELEALLAEL 275
Query: 379 PESIIDFLKEHS--AGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCE 436
PE+II+FLKEHS AG+TGEDE+EIDIDAL DD LF LRKLLD+YLLEKQ+ Q+ PCE
Sbjct: 276 PENIIEFLKEHSGNAGQTGEDEIEIDIDALGDDILFNLRKLLDNYLLEKQKNQSKVEPCE 335
Query: 437 MEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSS 496
ME++ N S+S
Sbjct: 336 MEII------------------------------------------------NESGISNS 347
Query: 497 SSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSS 556
S G+ +++ D G++P + S P +E+ N S
Sbjct: 348 SLQPCKGNDTAEEDIDIVGGNDPPIS--SYPPVKIEKEAAHK---------------NKS 390
Query: 557 VNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREK 616
V+ L QVEL+++GKPVA ADGH EGESAP ERQVSP+KLYRAALLRNRFADTILKAREK
Sbjct: 391 VDGLAQVELDTEGKPVAAEADGHQEGESAPPERQVSPEKLYRAALLRNRFADTILKAREK 450
Query: 617 ALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELE 676
ALEKGEKRDPEKLR E+EE ERR +EEKARLQAEAKAAEEARRKAEAEAAAEAKR+RELE
Sbjct: 451 ALEKGEKRDPEKLRKEKEEFERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRQRELE 510
Query: 677 REAARQALQMMEKTVDINENSRFMEDLEMLRIA-QDEQLPSFTAEASPDHLQDRLGSFKF 735
REAARQAL MEKTVDINEN +FMEDLEMLRIA DEQLPSF E SPDH Q+ LGSFK
Sbjct: 511 REAARQALIQMEKTVDINENCQFMEDLEMLRIAHHDEQLPSFIEETSPDHSQNGLGSFKL 570
Query: 736 QGSTNPLEQLGLYMK-MDDDDEEEVEPPLTAKEPIKDVEEGEID 778
QGS NPLEQLGLYMK D+D+EE VEPP + + KDVEEGEID
Sbjct: 571 QGS-NPLEQLGLYMKEDDEDEEEVVEPPSSVPDLTKDVEEGEID 613
>gi|356560519|ref|XP_003548539.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 744
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/752 (56%), Positives = 537/752 (71%), Gaps = 24/752 (3%)
Query: 35 SSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQ 94
S G+ + +A++T ESEG GSSGR+DTE+T SEDS P RKCISLN +D FG P+Q
Sbjct: 9 SGGY---FGNALDTAGESEGSGSSGRIDTEITVSEDSSIPTRKCISLNSSRHDAFGAPVQ 65
Query: 95 VLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDIRSCNDGQKRPL 153
V+ LS M ++R+ L +L+++LEQ+R+LQKK+ +N V LS SSDI SC++G
Sbjct: 66 VVPLSNMPLSQRKDLVQRLRSELEQIRLLQKKIEQQRTNGVALSSSSDILSCSNGNNGHR 125
Query: 154 LESVGGPSVVLAPKGKKRAPNGRNGPQTK---KGNSGRLEPKKPAGAASSSNAMLMKQCE 210
+E PS+ + G K P+G +++ +G+SG+ E + + S++NAMLMK CE
Sbjct: 126 VERDKKPSMSSSAPGNKVKPSGNKNQKSRGWNRGSSGKFESAVQSASPSTANAMLMKDCE 185
Query: 211 NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAAD 270
LL RLMSHQ+ WVF TPVDV+KLN+PDYFT+IK PMDLGT+K K+ +G+Y+ PL FA D
Sbjct: 186 LLLKRLMSHQYAWVFKTPVDVVKLNLPDYFTIIKRPMDLGTVKSKLAAGEYAGPLEFADD 245
Query: 271 VRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETE 330
V+LTFSNAM YNP NDVH+MADTL KYFE+RWKAIEKKLP + D+ +P++ D+ +
Sbjct: 246 VKLTFSNAMNYNPSGNDVHLMADTLNKYFELRWKAIEKKLPKS-DVLPIPAKPDNSEGVK 304
Query: 331 TRMGMPPMKKKKVS--PKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
T+ PP KK+K++ P + K+ P ++VM+++EK L ELE+LL E+P IIDFLKE
Sbjct: 305 TKRQAPPSKKRKIASLPPQPKV-MPPTKKVMSDQEKHDLGRELESLLGEMPMHIIDFLKE 363
Query: 389 HSAG--ETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLS 446
HS+ E G+DE+EIDID LSDDTLF LRKLLDD+L EKQ+ +A CE+EVLN+SG S
Sbjct: 364 HSSNGRECGDDEIEIDIDDLSDDTLFTLRKLLDDFLQEKQKNKAKVEACEVEVLNDSGPS 423
Query: 447 NSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSS 506
NSS+Q KGND DE+VDI GGN+PPV+ V IEKD R +K S SS+ SS
Sbjct: 424 NSSLQPFKGNDPADEEVDI-GGNEPPVSSYSHVEIEKDTTYRVNKSLSPGSSNDTDSDSS 482
Query: 507 SDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELN 566
SDS++ S + AKA ENL S A LDE N SV+ LDQ+E N
Sbjct: 483 SDSEADDVKASPANVAKAP-------ENLGSEAQLDEMTMAAATLERNQSVSGLDQLEDN 535
Query: 567 SQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDP 626
SQ KP + +D +G+SAP+ERQVSPDKLYRAA+L+ RF DTILKAREK L +GEK DP
Sbjct: 536 SQHKPSSFDSDCQQDGDSAPTERQVSPDKLYRAAVLKKRFLDTILKAREKTLTQGEKGDP 595
Query: 627 EKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQM 686
EKLR ERE+LE ++EKARLQAEAKAAE+AR++AE EAAAEA+RKRELEREAARQAL
Sbjct: 596 EKLRQEREKLEMEQKKEKARLQAEAKAAEDARKRAEEEAAAEARRKRELEREAARQALLQ 655
Query: 687 MEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLG 746
MEKTV+INENSR +EDLEMLR EQLPS E SP H QD LGSFKF GS+NPLEQLG
Sbjct: 656 MEKTVEINENSRILEDLEMLRAVPAEQLPSSVDETSPAHSQDGLGSFKF-GSSNPLEQLG 714
Query: 747 LYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
LY+K DD++EE P + P+ DVEEGEID
Sbjct: 715 LYIKADDEEEEGEPPCIP--NPVNDVEEGEID 744
>gi|356560521|ref|XP_003548540.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 740
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/770 (53%), Positives = 512/770 (66%), Gaps = 45/770 (5%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMA-ESEGFGSSGRVDTEMTASEDSCAPKRKCISLN 82
M KSR S G+ Y +AVET +SEG G+SGR+D T EDS +RKCISLN
Sbjct: 1 MAKSR-----LSGGY---YENAVETGGGDSEGSGTSGRIDAGNTILEDSSVRRRKCISLN 52
Query: 83 IDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSD 141
G D FGVP+QV+ +S ++ +R+ L +L ++LEQ+RV +K++ N V+LS +D
Sbjct: 53 SSGNDAFGVPMQVVPMSNLAPLQRKELVDRLTSELEQIRVFRKRIELQRMNDVMLSSKND 112
Query: 142 IRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP--------QTKKGNSGRLEPKK 193
I S GP V P P + P + +G+SG+ E
Sbjct: 113 IISSRRNDH-------NGPQVERKPSMSSSVPGNESKPLGQSQKPREWNRGSSGKFESAT 165
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
S++NA+LMK CE LL RLMSHQ+GWVF TPVDV+KL +PDYF++IKHPMDLGT+K
Sbjct: 166 RTSLLSAANALLMKDCELLLKRLMSHQYGWVFKTPVDVVKLKLPDYFSIIKHPMDLGTVK 225
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVT 313
KI +G+Y+ P+ FA DVRLTFSNAM YNP NDVH+MADTL KYFE+RWKAIEKKLP
Sbjct: 226 SKIAAGEYAGPIEFADDVRLTFSNAMIYNPRGNDVHVMADTLSKYFELRWKAIEKKLPRR 285
Query: 314 VDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETK-IKAEPVRRVMTNEEKRILSTELE 372
D+ PS+ D + TR MPP KK+K+S + + P ++VM+++EK L ELE
Sbjct: 286 DDV-PFPSKPDTYVIKTTR-PMPPSKKRKISTLPCQPVVMPPAKKVMSDQEKHNLGIELE 343
Query: 373 ALLEELPESIIDFLKEHSAG--ETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQA 430
+LL E+P IIDFLKE+ + E GEDELEIDID L DDTLFALRKLLDD+LLEKQ +
Sbjct: 344 SLLGEMPMHIIDFLKENCSNGEECGEDELEIDIDDLKDDTLFALRKLLDDFLLEKQMNET 403
Query: 431 NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNS 490
E+EVLN+SG SNSS+ KGND DE+VDI GGN+PPV+ PPV IEKD R +
Sbjct: 404 KVEVREIEVLNDSGPSNSSLLPFKGNDSDDEEVDI-GGNEPPVSSYPPVEIEKDTTCRIN 462
Query: 491 KCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEE--NLVSGANLDEKKSEG 548
C S SS ++S SS S PAN +E N+ SGA + E
Sbjct: 463 TCLSPGSSDTDSSDSSDSESDDVKSN----------PANVAKEPENMESGAQMVENSRAD 512
Query: 549 VPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFAD 608
N SV LD++E NSQ KP + +D H +GE P+ER+VSPDKLYRAALL+NRFAD
Sbjct: 513 DTSERNQSVGGLDKLEDNSQQKPSSFSSDCHQDGECGPTERKVSPDKLYRAALLKNRFAD 572
Query: 609 TILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAE 668
TILKAREK L KGEK DPEKLR +RE+LE ++E+ARLQAEAKAAE+AR++A+AEAAAE
Sbjct: 573 TILKAREKTLTKGEKGDPEKLRQQREKLEIERQKERARLQAEAKAAEDARKRADAEAAAE 632
Query: 669 AKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQD 728
A+RKRELEREAARQ L MEK+V+INENS+F+ED E+L EQLPS E SPD QD
Sbjct: 633 ARRKRELEREAARQVLLQMEKSVEINENSQFLEDFELLSAVPAEQLPSSVDETSPDISQD 692
Query: 729 RLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
+GSFKF G NPLEQLGLY+K DD+EEE +P P+ D+EEGEID
Sbjct: 693 GMGSFKF-GGGNPLEQLGLYIKD-DDEEEEGDPLCVPNPPVNDIEEGEID 740
>gi|356574042|ref|XP_003555161.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 741
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/768 (55%), Positives = 533/768 (69%), Gaps = 40/768 (5%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNI 83
M KSR S G+ + +A++T ESEG GSSGR+DTE+T SEDS P RKCISLN
Sbjct: 1 MAKSR-----LSGGY---FGNALDTAGESEGSGSSGRIDTEITVSEDSSIPARKCISLNS 52
Query: 84 DGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKV-ASLSSNVVLSPSSDI 142
+D FG P+QV+ LS M + R+ L +L+++LEQ+R+LQKK+ ++ VVLS SSDI
Sbjct: 53 SRHDVFGAPVQVVPLSNMPLSHRKDLGQRLRSELEQIRLLQKKIEQQRTTAVVLSSSSDI 112
Query: 143 RSCNDGQ--------KRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKP 194
SC++G K+P + S P P K + P G N +G+SG+ E
Sbjct: 113 LSCSNGNNGHRVERDKKPAMSS-SAPRNKAKPGNKNQKPRGWN-----RGSSGKFESAVQ 166
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
+ + S++NAMLMK CE LL RLM+HQ+ WVFNTPVDV+KLN+PDYFT+IK PMDLGT+K
Sbjct: 167 SASPSTANAMLMKDCELLLKRLMNHQYAWVFNTPVDVVKLNLPDYFTIIKRPMDLGTVKN 226
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTV 314
K+ SG+Y+ PL FA DV+LTFSNAM YNP NDVH+MADTL KYFE+RWKAIEKKL +
Sbjct: 227 KLASGEYAGPLEFADDVKLTFSNAMDYNPSGNDVHLMADTLNKYFELRWKAIEKKLQKS- 285
Query: 315 DMTAVPSRADDMIETETRMGMPPMKKKKVS--PKETKIKAEPVRRVMTNEEKRILSTELE 372
D +P+ D+ +T+ P KK+K++ P + ++ P ++VM+++EK L ELE
Sbjct: 286 DFLPLPANPDNSEGVKTKRQAPLSKKRKIASLPPQPEV-MPPTKKVMSDQEKHDLGRELE 344
Query: 373 ALLEELPESIIDFLKEHSAG--ETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQA 430
+ L E+P IIDFLKEHS+ E G+DE+EIDID LSDDTLF LRKLLDD+L +KQ+ +A
Sbjct: 345 SQLGEMPMHIIDFLKEHSSNGRECGDDEIEIDIDDLSDDTLFTLRKLLDDFLQKKQKNKA 404
Query: 431 NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNS 490
CE+EVLN+SG SNSS+Q KGND DE+VDI GGN+PPV+ P V IEKD +
Sbjct: 405 KVEACEVEVLNDSGPSNSSLQPFKGNDPADEEVDI-GGNEPPVSSYPHVEIEKDTTYGMN 463
Query: 491 KCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVP 550
K S SS+ SSSDS++ +AAKA ENL S A LDE
Sbjct: 464 KSLSPGSSNDTDSDSSSDSEADDVKARPANAAKAP-------ENLGSEAQLDEMTMAAAS 516
Query: 551 DIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTI 610
N SV+ LDQ++ NSQ KP + +D +G+SA +ERQ SPDKLYRAA+L+ RF DTI
Sbjct: 517 LERNQSVSGLDQLDDNSQHKPSSFDSDCQQDGDSAATERQFSPDKLYRAAVLKKRFLDTI 576
Query: 611 LKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAK 670
LKAREK L +GEK DPEKLR ERE+LE ++EKARLQAEAKAAE+AR++AE EAAAEA+
Sbjct: 577 LKAREKTLTQGEKGDPEKLRQEREKLEMEQKKEKARLQAEAKAAEDARKQAEEEAAAEAR 636
Query: 671 RKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRL 730
RKRELEREAARQAL MEKTV+INENSR +EDLE+LR EQLPS E SP H QD L
Sbjct: 637 RKRELEREAARQALLQMEKTVEINENSRILEDLELLRAVPTEQLPSSVDETSPAHSQDGL 696
Query: 731 GSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
GSFKF GS+NPLEQLGLY+K DD++EE P + P+ DVEEGEID
Sbjct: 697 GSFKF-GSSNPLEQLGLYIKADDEEEEGEPPCIP--NPVNDVEEGEID 741
>gi|449455878|ref|XP_004145677.1| PREDICTED: transcription factor GTE8-like [Cucumis sativus]
Length = 750
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 390/739 (52%), Positives = 505/739 (68%), Gaps = 43/739 (5%)
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
R+D E+ ASE S P R+C+S + D + VP QVL L+ + Q+ER+ L +L+ +L+Q
Sbjct: 35 RIDPEIAASEVSSTPMRRCVSFSSDNREGLRVPTQVLPLTSLLQSERKDLIYRLRKELQQ 94
Query: 120 VRVLQKKVASLSSNVVL----SPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNG 175
++ L+KKV L ++ S + +G +++ P+ G+++ PN
Sbjct: 95 IQTLRKKVELLRTHSFTVSSSSDILSCSNVRNGPSAECIKNTANPT-----SGQRKKPNV 149
Query: 176 RNGPQTKKGN-SGRLEPKK--PAGAASSSN------AMLMKQCENLLTRLMSHQFGWVFN 226
P KKG S R+ K PA AS SN A+LMKQCE LL R+MSHQ+ WVFN
Sbjct: 150 ---PSHKKGQGSSRVASDKVGPAAQASVSNTSTATSAILMKQCEQLLKRVMSHQYAWVFN 206
Query: 227 TPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQN 286
TPVDV+KLN+PDYFT+IKHPMDLGT+K K++SG YS PL F ADVRLTFSNAMTYNPP N
Sbjct: 207 TPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSGAYSSPLDFLADVRLTFSNAMTYNPPGN 266
Query: 287 DVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPK 346
DVH+MAD L YF++RWKAIEKKLP T D ++P+++ + ET +P +KK KV+ +
Sbjct: 267 DVHVMADVLNSYFDMRWKAIEKKLPKT-DGHSLPTKSRPREDVETVKNVP-LKKMKVASR 324
Query: 347 ETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG--ETGEDELEIDID 404
++ P + VMT+EEK L ELE+LL E+P IIDFL+E S+G E GEDE EIDID
Sbjct: 325 PQEVTPIPSKLVMTDEEKLSLGRELESLLGEMPLHIIDFLREQSSGGRECGEDEFEIDID 384
Query: 405 ALSDDTLFALRKLLDDYLLEKQQKQANPGPC--EMEVLNESGLSNSSMQLCKGNDLVDED 462
LSDDTLF LRKLLDD+ EKQ+ A+ PC E+++LN+SG+SNSSMQ KG++ +DED
Sbjct: 385 DLSDDTLFKLRKLLDDHFQEKQKNNASAEPCVIELQMLNDSGVSNSSMQPSKGSEPIDED 444
Query: 463 VDIVGGNDPPVTDIPPVAIEK---DAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEP 519
++ GGN+ PV+ P+ IE+ DA +RN KC+SS +S +S SS S++DS G P
Sbjct: 445 LN-GGGNEAPVSSCAPMEIERSAMDAIHRNRKCTSSRNSK-DSDSSCSENDS--ECGKTP 500
Query: 520 DAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGH 579
VP E + S + E + P N S +Q E S KP + +D +
Sbjct: 501 SQVHEQVP-----ETIGSEGPIIETTTSDEPFERNQSEGCYEQPEQTS-SKPSSTESDCN 554
Query: 580 HEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERR 639
+G SE+ VSP++LYRAALL+NRFADTIL+A+EK + +G+K DPEKLR EREELE
Sbjct: 555 QDGNYTASEKPVSPERLYRAALLKNRFADTILRAKEKTMTQGDKGDPEKLRREREELELE 614
Query: 640 HREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRF 699
R+EKARLQAEAKAA++A+R+AEAEAAAEAKRKREL+REAARQAL +EKTV I+ENS+F
Sbjct: 615 QRKEKARLQAEAKAAQDAQRRAEAEAAAEAKRKRELDREAARQALLQIEKTVIIDENSQF 674
Query: 700 MEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEV 759
+EDLEMLR A EQLPS E SPDH QD LGSFKF GS NPLEQLGL++K D++D EE+
Sbjct: 675 LEDLEMLRAAPAEQLPSSGDETSPDHSQDGLGSFKFVGS-NPLEQLGLFIKADEED-EEI 732
Query: 760 EPPLTAKEPIKDVEEGEID 778
EP + IKDVEEGEID
Sbjct: 733 EPNFVSNS-IKDVEEGEID 750
>gi|240256475|ref|NP_201137.5| nuclear protein X1 [Arabidopsis thaliana]
gi|327488242|sp|Q9FGW9.2|GTE10_ARATH RecName: Full=Transcription factor GTE10; AltName:
Full=Bromodomain-containing protein GTE10; AltName:
Full=Nuclear protein X1; AltName: Full=Protein GLOBAL
TRANSCRIPTION FACTOR GROUP E10
gi|332010349|gb|AED97732.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 1061
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 410/765 (53%), Positives = 526/765 (68%), Gaps = 45/765 (5%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNI 83
MGK+RK+S+G SGFVPDY AVE + F S R++ SE S KR+ LN
Sbjct: 1 MGKARKHSRGRPSGFVPDYMQAVEP----DEFVYSERMN-----SEASPPLKRRRFGLN- 50
Query: 84 DGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDI 142
DN GV +VL+LSKMS++ER++L KLK +L+QVR L KK+AS SS+ V+LSP +D
Sbjct: 51 --GDNNGVSKEVLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDTVLLSPYND- 107
Query: 143 RSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSN 202
SC+DG +RP E+ + + +GKKR P + + KKG P + S +
Sbjct: 108 HSCSDGPRRPPPENF---ATFVGSQGKKRPPVRSDKQRNKKG------PSRLNVPTSYTV 158
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A +MK+CE LL RL SH+ GW F TPVD + LNIPDYF VIKHPMDLGTI+ ++ G+YS
Sbjct: 159 ASVMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYS 218
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
PL FAADVRLTFSN++ YNPP N H MA + KYFE WK+IEKK+P++ +P
Sbjct: 219 SPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMS-KPPVIPLT 277
Query: 323 ADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESI 382
+ +E+E + PM+KK+ + + K++ EP + VMT+ EK+ L +L AL E+ P+ I
Sbjct: 278 SSASLESEIPFEVAPMRKKEAAMNDNKLRVEPAKLVMTDGEKKKLGQDLMALEEDFPQKI 337
Query: 383 IDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVL 440
D L+E S G++GE E+EIDI+ALSD+ LF +RKLLDDYL EK++ PCEME++
Sbjct: 338 ADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKSMEKSEPCEMEIV 397
Query: 441 NESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSS 500
++SG SNS +Q KG+ +DEDVDIVGGNDP V+ PP+ IEKDAA RN++ SSSSSSSS
Sbjct: 398 HDSGFSNSPLQPSKGDLQIDEDVDIVGGNDPSVSSHPPLKIEKDAACRNNESSSSSSSSS 457
Query: 501 ESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPD--IGNSSVN 558
ESGSSSSDSDS SSSGSE D+ KAS P + EE G +D+K+ + + + N S+N
Sbjct: 458 ESGSSSSDSDSCSSSGSETDSIKASKPT-SREEKKQPGVGIDKKEDDSNSEKIVVNDSLN 516
Query: 559 SLDQVELNSQGK-----PVAIVADGHHEGESAPSERQVSPD---KLYRAALLRNRFADTI 610
LDQ+E K V +V D E+AP ERQ+SPD K YRAA L+NRFADTI
Sbjct: 517 ELDQLEHTVGEKSTTMDAVVLVPDE----ETAPPERQISPDSPDKRYRAAFLKNRFADTI 572
Query: 611 LKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAK 670
+KAREKA KGEK DPEKLRIEREE E+R REEK RLQAEAKAAEEARRKA+AEAA +A+
Sbjct: 573 MKAREKAFTKGEKGDPEKLRIEREEFEKRLREEKERLQAEAKAAEEARRKAKAEAAEKAR 632
Query: 671 RKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDE--QLPSFTAEASPDHLQD 728
R+RE EREAARQALQ MEKTV+INE RFMEDL+MLR E QLP+ SP +D
Sbjct: 633 REREQEREAARQALQKMEKTVEINEGIRFMEDLQMLRATGTEGDQLPTSMEVMSPKFSED 692
Query: 729 R--LGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKD 771
LGSFK + ++NPLE LGLYMKMD+D++EE +PP ++ ++D
Sbjct: 693 MLGLGSFKMESNSNPLEHLGLYMKMDEDEDEEEDPPHFSQRKVED 737
>gi|255536997|ref|XP_002509565.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223549464|gb|EEF50952.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 718
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 399/737 (54%), Positives = 494/737 (67%), Gaps = 78/737 (10%)
Query: 101 MSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDIRSCNDGQKRPLLESVGG 159
MS +ER++L +L+ +LEQ+R+LQKK+ N V LS SSDI SC++G P
Sbjct: 1 MSSSERKNLIRRLRFELEQIRLLQKKLEVQKINAVTLSSSSDILSCSNGTNGPRAAKFNK 60
Query: 160 PSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSH 219
+++ + KK P+ + + + +SGR + K A ++N M+MKQCE LL+RLMSH
Sbjct: 61 SAMLTSGPVKKANPSDKIR-EWNRSSSGRFKSTKQPSAPLATNMMVMKQCETLLSRLMSH 119
Query: 220 QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAM 279
Q+GWVF PVDV+KLNIPDY+T+IKHPMDLGTIK I SG YS PL F ADVRLTF NAM
Sbjct: 120 QYGWVFKEPVDVVKLNIPDYYTIIKHPMDLGTIKSNICSGLYSSPLEFLADVRLTFRNAM 179
Query: 280 TYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRA---DDMIETETRMGMP 336
YNP +DVHIMADTL K+FEVRWKAIEKKLP +D +PS++ +D+ TE +
Sbjct: 180 EYNPKGSDVHIMADTLSKFFEVRWKAIEKKLP-KIDTHGLPSKSGPREDLQITE----IS 234
Query: 337 PMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG--ET 394
P+KK+K+S + +I A PVRRVMT++EK+ L ELE+LL E+P IIDFLK+HS+ +
Sbjct: 235 PIKKRKISSYQHEIVAVPVRRVMTDDEKQKLGKELESLLGEMPIHIIDFLKDHSSNGRDA 294
Query: 395 GEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCK 454
GEDE+EIDID LSDDTLF LR+LLDDYLLEKQ+ QA PCE+E+LNESGLSNSSMQ K
Sbjct: 295 GEDEIEIDIDDLSDDTLFTLRRLLDDYLLEKQKSQARVEPCEIELLNESGLSNSSMQQQK 354
Query: 455 GNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSS 514
GND DEDVDI GGN+PPV+ PPV IEKD N+ +KC SS S + SSS+SD+
Sbjct: 355 GNDAADEDVDI-GGNEPPVSSYPPVEIEKDTGNKGTKCISSGSPTGSDSDSSSESDT--- 410
Query: 515 SGSEPDAAKASVPANA--VEENLVSGANLDEKKSEGVPDIGNSSVN-SLDQVELNSQG-- 569
AKA P A V N SG LD+K S N ++N S +LN+ G
Sbjct: 411 ------DAKALSPTTATKVNGNFGSGPQLDDKTSAVDLLERNRTLNTSKFWNKLNTTGIY 464
Query: 570 ----KPVAI--------------VA------------------------------DGHHE 581
P+AI VA D +
Sbjct: 465 NNYRLPIAIRLEMKNHNIPPFLEVALVLMCDDPESVSGLDQLEQTSQQKPSSVESDCCQD 524
Query: 582 GESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHR 641
G+SAP+ERQVSPDKL+RAA+L+NRFA+TILKAREK L + +K DPEKLR E+ ELE + +
Sbjct: 525 GDSAPNERQVSPDKLFRAAMLKNRFAETILKAREKTLSQVDKGDPEKLRREKVELELQKK 584
Query: 642 EEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFME 701
+EKARLQAEAKAAE+AR++AEA AAAEA+RKRELEREAARQAL MEKTV+INENS+ +E
Sbjct: 585 KEKARLQAEAKAAEDARKQAEAAAAAEARRKRELEREAARQALLKMEKTVEINENSQLLE 644
Query: 702 DLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEP 761
DLEMLR A E LPS E SP H QD LG FKF GS NPLEQLGL+MK D+++EE
Sbjct: 645 DLEMLRAAPVEHLPSSVDETSPVHSQDGLGGFKFGGS-NPLEQLGLFMKQDEEEEEGE-- 701
Query: 762 PLTAKEPIKDVEEGEID 778
PL P+ D+EEGEID
Sbjct: 702 PLNILNPVNDMEEGEID 718
>gi|297814970|ref|XP_002875368.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
gi|297321206|gb|EFH51627.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 356/737 (48%), Positives = 456/737 (61%), Gaps = 70/737 (9%)
Query: 42 YRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKM 101
YR+ E ESEG GSS ++DTE+TASE+S P RKCI LN + D +GV QV++L M
Sbjct: 12 YRNTFEAPDESEGSGSSAQIDTEVTASENSSTPARKCIMLNSNDEDPYGVQRQVISLYNM 71
Query: 102 SQTERRSLELKLKTDLEQVRVLQKK----------VASLSSNVVLSPSSDIRSCNDGQKR 151
SQ+ER+ L +LK +LEQ +++ + V+S S V S + + S K+
Sbjct: 72 SQSERKDLIYRLKLELEQTKIVLRNAELQRMNPAAVSSTSDRVGFSTAQKLSSRVSNSKK 131
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P ++G V G R N +G SG+ E K + S++N LMKQC+
Sbjct: 132 PSDFAMGSGKKVRHQTGSSRGWN--------RGTSGKFESSKES-MTSTTNITLMKQCDT 182
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL +L SH WVF PVDV+KLNIPDY T+IKHPMDLGT+K + SG YS P FAADV
Sbjct: 183 LLKKLWSHPHSWVFQAPVDVVKLNIPDYLTIIKHPMDLGTVKKNLASGVYSSPHEFAADV 242
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETET 331
RLTF+NAMTYNPP +DVHIM D L K FE RWK IEKKLP T + E +
Sbjct: 243 RLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIEKKLPACSMQTLPAITLEPNDERKA 302
Query: 332 RMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSA 391
+ +PP KK+K++ + EPV+ +MT EE+ L +LE+LL+ELP IIDFLK+HS+
Sbjct: 303 AISVPPAKKRKMASPVRESVPEPVKPLMTAEERHRLGRQLESLLDELPAHIIDFLKKHSS 362
Query: 392 --GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSS 449
GE EDE+EIDID LSD+ L LR LLD+Y+ K+ KQ+N PCE+E++N SG SNSS
Sbjct: 363 NGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKETKQSNVEPCEIELINGSGPSNSS 422
Query: 450 MQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKC----SSSSSSSSESGSS 505
+Q +GN+L DE VGGN+PP++ + + +++ S E+G+S
Sbjct: 423 LQ--RGNELADE---YVGGNEPPISRSSSDSDSGSSEDQSDDAKPMVQEDYSKMPETGNS 477
Query: 506 SSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVEL 565
+ D N ++L G+ S +L+Q+++
Sbjct: 478 EAQRDE-----------------NTRIDDLFGGSQ---------------STGALEQMDI 505
Query: 566 NSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKAL-EKGEKR 624
SQ KP + +D HEG E VS +K YRAALL+NRFAD ILKAREK L + G K
Sbjct: 506 CSQQKPSSDESDIQHEGNIL--ETPVSSEKRYRAALLKNRFADIILKAREKPLPQNGIKG 563
Query: 625 DPEKLRIEREELERRHREEKARLQAEAKAAEE----ARRKAEAEAAAEAKRKRELEREAA 680
DPE+LR EREELE + ++EKARLQAEAKAAE+ A +A AEAAAEAKRKRELEREAA
Sbjct: 564 DPERLRKEREELELQKKKEKARLQAEAKAAEDARRQAEAEAAAEAAAEAKRKRELEREAA 623
Query: 681 RQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTN 740
RQAL MEKTV+INENSRF+EDLEML + EQLPS E SP+ D LGSF +GS N
Sbjct: 624 RQALLKMEKTVEINENSRFLEDLEMLSSSAPEQLPSSADETSPEKPLDALGSFNLRGS-N 682
Query: 741 PLEQLGLYMKMDDDDEE 757
PLEQLGLYMK DDD+EE
Sbjct: 683 PLEQLGLYMKQDDDEEE 699
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 720 EASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
E SP+ D GSF +GS+NPLEQLGLYMK DDD+EE P DVEEGEID
Sbjct: 758 ETSPERPLDAFGSFNLKGSSNPLEQLGLYMKQDDDEEEPEAP--AVPNLANDVEEGEID 814
>gi|15232127|ref|NP_189362.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|327488239|sp|Q9LK27.2|GTE8_ARATH RecName: Full=Transcription factor GTE8; AltName:
Full=Bromodomain-containing protein GTE8; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E8
gi|332643763|gb|AEE77284.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 813
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 355/739 (48%), Positives = 446/739 (60%), Gaps = 66/739 (8%)
Query: 42 YRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKM 101
YR+ E ESEG GSS ++DTE+TASE+S P RKCI LN + D +GV QV++L M
Sbjct: 12 YRNTFEAPEESEGSGSSAQIDTEVTASENSSTPARKCIMLNSNDEDPYGVQRQVISLYNM 71
Query: 102 SQTERRSLELKLKTDLEQVRVLQKK----------VASLSSNVVLSPSSDIRSCNDGQKR 151
SQ+ER+ L +LK +LEQ +++ K V+S S V S I S K+
Sbjct: 72 SQSERKDLIYRLKLELEQTKIVLKNAELQRMNPAAVSSTSDRVGFSTGQKISSRVSNSKK 131
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P +VG V G R N +G SG+ E K S+ N LMKQC+
Sbjct: 132 PSDFAVGSGKKVRHQNGTSRGWN--------RGTSGKFESSKET-MTSTPNITLMKQCDT 182
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL +L SH WVF PVDV+KLNIPDY T IKHPMDLGT+K + SG YS P FAADV
Sbjct: 183 LLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADV 242
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMT--AVPSRADDMIET 329
RLTF+NAMTYNPP +DVHIM D L K FE RWK I+KKLP T AV +D E
Sbjct: 243 RLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPND--ER 300
Query: 330 ETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEH 389
+ + +PP KK+K++ + EPV+ +MT E+ L +LE+LL+ELP IIDFLK+H
Sbjct: 301 KAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKH 360
Query: 390 SA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSN 447
++ GE EDE+EIDID LSD+ L LR LLD+Y+ K+ KQ N PCE+E++N S SN
Sbjct: 361 NSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVEPCEIELINGSRPSN 420
Query: 448 SSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSS 507
SS+Q +GN++ DE VD GN+PP++ SSS SS
Sbjct: 421 SSLQ--RGNEMADEYVD---GNEPPIS---------------------RSSSDSDSGSSE 454
Query: 508 DSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNS 567
D + + D++K AN S A DE +G+ S +L+Q+++ S
Sbjct: 455 DQSDDAKPMVQGDSSKMPETAN-------SEAQRDENTRIDDLFVGSQSTGALEQMDICS 507
Query: 568 QGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDP 626
Q K + +DG HEG E S +K YRAALL+NRFAD ILKAREK L + G K DP
Sbjct: 508 QQKLSSDESDGQHEGNIL--ETPASSEKRYRAALLKNRFADIILKAREKPLPQNGIKGDP 565
Query: 627 EKLRIEREELERRHREEK----ARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQ 682
E+LR EREEL + ++EK A +A A +A +A AEAAAEAKRKRELEREAARQ
Sbjct: 566 ERLRKEREELVLQKKKEKARLQAEAEAAEDARRQAEAEAAAEAAAEAKRKRELEREAARQ 625
Query: 683 ALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPL 742
AL MEKTV+INENSRF+EDLEML + EQLPS E SP+ D LGSF +GS NPL
Sbjct: 626 ALLKMEKTVEINENSRFLEDLEMLSSSAPEQLPSSAEETSPERPLDALGSFNLRGS-NPL 684
Query: 743 EQLGLYMKMDDDDEEEVEP 761
EQLGLYMK DDD+EE P
Sbjct: 685 EQLGLYMKQDDDEEEPEAP 703
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 728 DRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
D GSF +GS NPLEQLGLYMK DDD+EE P DVEEGEID
Sbjct: 766 DAFGSFNLKGS-NPLEQLGLYMKQDDDEEEPEAP--AVPNLANDVEEGEID 813
>gi|9294219|dbj|BAB02121.1| unnamed protein product [Arabidopsis thaliana]
Length = 818
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 353/739 (47%), Positives = 446/739 (60%), Gaps = 61/739 (8%)
Query: 42 YRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKM 101
YR+ E ESEG GSS ++DTE+TASE+S P RKCI LN + D +GV QV++L M
Sbjct: 12 YRNTFEAPEESEGSGSSAQIDTEVTASENSSTPARKCIMLNSNDEDPYGVQRQVISLYNM 71
Query: 102 SQTERRSLELKLKTDLEQVRVLQKK----------VASLSSNVVLSPSSDIRSCNDGQKR 151
SQ+ER+ L +LK +LEQ +++ K V+S S V S I S K+
Sbjct: 72 SQSERKDLIYRLKLELEQTKIVLKNAELQRMNPAAVSSTSDRVGFSTGQKISSRVSNSKK 131
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P +VG V G R N +G SG+ E K S+ N LMKQC+
Sbjct: 132 PSDFAVGSGKKVRHQNGTSRGWN--------RGTSGKFESSKET-MTSTPNITLMKQCDT 182
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL +L SH WVF PVDV+KLNIPDY T IKHPMDLGT+K + SG YS P FAADV
Sbjct: 183 LLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADV 242
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMT--AVPSRADDMIET 329
RLTF+NAMTYNPP +DVHIM D L K FE RWK I+KKLP T AV +D E
Sbjct: 243 RLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPND--ER 300
Query: 330 ETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEH 389
+ + +PP KK+K++ + EPV+ +MT E+ L +LE+LL+ELP IIDFLK+H
Sbjct: 301 KAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKH 360
Query: 390 SA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSN 447
++ GE EDE+EIDID LSD+ L LR LLD+Y+ K+ KQ N PCE+E++N S SN
Sbjct: 361 NSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVEPCEIELINGSRPSN 420
Query: 448 SSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSS 507
SS+Q +GN++ DE VD GN+PP++ D+ + +S+ S + G SS
Sbjct: 421 SSLQ--RGNEMADEYVD---GNEPPIS-----RSSSDSDSGSSEDQSDDAKPMVQGDSSK 470
Query: 508 DSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNS 567
+P A E A DE +G+ S +L+Q+++ S
Sbjct: 471 -------------LVNLQMPETANSE-----AQRDENTRIDDLFVGSQSTGALEQMDICS 512
Query: 568 QGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDP 626
Q K + +DG HEG E S +K YRAALL+NRFAD ILKAREK L + G K DP
Sbjct: 513 QQKLSSDESDGQHEGNIL--ETPASSEKRYRAALLKNRFADIILKAREKPLPQNGIKGDP 570
Query: 627 EKLRIEREELERRHREEK----ARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQ 682
E+LR EREEL + ++EK A +A A +A +A AEAAAEAKRKRELEREAARQ
Sbjct: 571 ERLRKEREELVLQKKKEKARLQAEAEAAEDARRQAEAEAAAEAAAEAKRKRELEREAARQ 630
Query: 683 ALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPL 742
AL MEKTV+INENSRF+EDLEML + EQLPS E SP+ D LGSF +GS NPL
Sbjct: 631 ALLKMEKTVEINENSRFLEDLEMLSSSAPEQLPSSAEETSPERPLDALGSFNLRGS-NPL 689
Query: 743 EQLGLYMKMDDDDEEEVEP 761
EQLGLYMK DDD+EE P
Sbjct: 690 EQLGLYMKQDDDEEEPEAP 708
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 728 DRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
D GSF +GS NPLEQLGLYMK DDD+EE P DVEEGEID
Sbjct: 771 DAFGSFNLKGS-NPLEQLGLYMKQDDDEEEPEAP--AVPNLANDVEEGEID 818
>gi|297807455|ref|XP_002871611.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
gi|297317448|gb|EFH47870.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
Length = 690
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 345/722 (47%), Positives = 448/722 (62%), Gaps = 69/722 (9%)
Query: 66 TASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQK 125
+ASE S KRK D FGV VL LS +S ++R+ L L+L+ +LEQ+R QK
Sbjct: 29 SASEGSNCSKRKL-------GDTFGVSKMVLPLSGLSSSDRKELILRLRQELEQIRFFQK 81
Query: 126 KVASLSSNVVLSPSSD---IRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTK 182
+S +V L+ SS R+ + G+ R GP + P P
Sbjct: 82 SF-EISRSVTLTSSSASGLTRAKSFGKSR----CSTGPGKTVNPLSAAAKPT-------- 128
Query: 183 KGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTV 242
+++ +LMKQCE LL RLMSHQ+GWVFNTPVDV+KLNI DYF V
Sbjct: 129 --------------PVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNV 174
Query: 243 IKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
IKHPMDLGT+K K+TSG YS P FAADVRLTFSNAMTYNPP NDV +MADTLRK+FEVR
Sbjct: 175 IKHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVFVMADTLRKFFEVR 234
Query: 303 WKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNE 362
WK +EKKL + + PS +D E + +P KK+K S + + +EPV+RVMT+E
Sbjct: 235 WKTLEKKLS-GIKVHTEPSNSDAHEEKHIVIPVPMAKKRKTSAVDCENVSEPVKRVMTDE 293
Query: 363 EKRILSTELEALLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDD 420
++ L +LE+ L E P +I+FL++H++ G G+DE+EIDI+ LS LF LR LLD+
Sbjct: 294 DRLKLGKDLES-LTEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSHHALFQLRDLLDE 352
Query: 421 YLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVA 480
+L E Q K+++ PCE+E+L+ S NS MQ C G++L DE +DI G N+ P + I PV
Sbjct: 353 HLRESQNKKSSVEPCEIELLHGSVPGNSLMQHCDGSELDDEVIDI-GKNEHPKSSISPVT 411
Query: 481 IEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGAN 540
IEKD NS +G S S P +K + E ++ GA
Sbjct: 412 IEKDLVLGNS-----------NGIFSFTCLYCHSVSGLPRTSKGLGTMDL--EPMLDGA- 457
Query: 541 LDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAA 600
+ P G SSV LDQ+E S K ++ AD +G SA +E+Q+ P+K+YRAA
Sbjct: 458 -----TSASPTRG-SSVGVLDQLESASPEKISSVEADCQQDGNSAQTEKQLPPEKIYRAA 511
Query: 601 LLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRK 660
L+NRFAD ILKAREK L + + RDPEKL+ EREELE + ++EKARLQAEAKAAEEARRK
Sbjct: 512 FLKNRFADIILKAREKPLNQNDLRDPEKLQREREELELQKKKEKARLQAEAKAAEEARRK 571
Query: 661 AEAEAAAEAKRKR----ELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPS 716
AEA+AAAEA + ELEREAARQAL ME++V++NEN++F++DLE+L+ + L
Sbjct: 572 AEAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELNENAKFLKDLELLKTVDTDHLTD 631
Query: 717 FTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGE 776
E PD D L SF F GS NPLEQLGL+MK D+DDEE PLT+ P D+EEGE
Sbjct: 632 AIEEDGPDVSHDGLRSFSFGGS-NPLEQLGLFMKQDEDDEE--ADPLTSPAPGIDIEEGE 688
Query: 777 ID 778
ID
Sbjct: 689 ID 690
>gi|334187679|ref|NP_001190308.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|332004628|gb|AED92011.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 689
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 346/722 (47%), Positives = 447/722 (61%), Gaps = 72/722 (9%)
Query: 67 ASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKK 126
SE S KRK + FGV VL LS +S ++R+ L +L+ +LEQ+RV QK
Sbjct: 30 VSEGSNCSKRKV-------GETFGVSKMVLPLSGLSSSDRKELIRRLRQELEQIRVFQKN 82
Query: 127 VASLSSNVVLSPSSD---IRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKK 183
LS V L+ SS R + G R GP + P P
Sbjct: 83 F-ELSRTVALTSSSASGLTRVKSFGMSR----CSTGPGKTVNPISAASKPT--------- 128
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI 243
+++ +LMKQCE LL RLMSHQ+GWVFNTPVDV+KLNI DYF VI
Sbjct: 129 -------------PVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVI 175
Query: 244 KHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+HPMDLGT+K K+TSG YS P FAADVRLTFSNAMTYNPP NDV++MADTLRK+FEVRW
Sbjct: 176 EHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRW 235
Query: 304 KAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEE 363
K +EKKL T T PS D E + +P KK+K + + + +P +RVMT+E+
Sbjct: 236 KTLEKKLSGTKVHTE-PSNLDAHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKRVMTDED 294
Query: 364 KRILSTELEALLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDY 421
+ L +LE+L E P +I+FL++H++ G G+DE+EIDI+ LSD LF LR LLD++
Sbjct: 295 RLKLGKDLESLT-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEH 353
Query: 422 LLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAI 481
L E Q K+++ PCE+E+L+ S NSSMQ C G++L DE VDI G N+ P + I PV I
Sbjct: 354 LREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDI-GENEHPTSSISPVTI 412
Query: 482 EKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANL 541
EKD NS +S S S + SS P A+K + E ++ GA
Sbjct: 413 EKDLVLGNSNGNSLGSVSGDPKMSSL-----------PRASKGLGTIDL--EPMLDGA-- 457
Query: 542 DEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAAL 601
+ P G +SV LDQ+E S K ++ AD +G SA +E+Q+ P+K YRAA+
Sbjct: 458 ----TSASPTRGLASVGGLDQLESASPEKISSVEADCQQDGNSAQNEKQLPPEKSYRAAI 513
Query: 602 LRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKA 661
L+NRFAD ILKAREK L + + RDPEKL+ EREELE + ++EKARLQAEAKAAEEARRKA
Sbjct: 514 LKNRFADIILKAREKPLNQNDTRDPEKLQREREELELQKKKEKARLQAEAKAAEEARRKA 573
Query: 662 EAEAAAEAKRKR----ELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLP-S 716
EA+AAAEA + ELEREAARQAL ME++V++NEN++F+EDLE+L+ + L +
Sbjct: 574 EAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELNENAKFLEDLELLKTVDTDHLTNT 633
Query: 717 FTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGE 776
E PD L SF F GS NPLEQLGL+MK D+D+EE PLT+ P D+EEGE
Sbjct: 634 IEEEDGPDV---GLRSFSFGGS-NPLEQLGLFMKQDEDEEE--ADPLTSPAPEIDIEEGE 687
Query: 777 ID 778
ID
Sbjct: 688 ID 689
>gi|18417335|ref|NP_568297.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|75163656|sp|Q93YS6.1|GTE9_ARATH RecName: Full=Transcription factor GTE9; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 9; Short=AtBET9;
AltName: Full=Bromodomain-containing protein GTE9;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E9
gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis thaliana]
gi|332004627|gb|AED92010.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 688
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 347/722 (48%), Positives = 447/722 (61%), Gaps = 73/722 (10%)
Query: 67 ASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKK 126
SE S KRK + FGV VL LS +S ++R+ L +L+ +LEQ+RV QK
Sbjct: 30 VSEGSNCSKRKV-------GETFGVSKMVLPLSGLSSSDRKELIRRLRQELEQIRVFQKN 82
Query: 127 VASLSSNVVLSPSSD---IRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKK 183
LS V L+ SS R + G R GP + P P
Sbjct: 83 F-ELSRTVALTSSSASGLTRVKSFGMSR----CSTGPGKTVNPISAASKPT--------- 128
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI 243
+++ +LMKQCE LL RLMSHQ+GWVFNTPVDV+KLNI DYF VI
Sbjct: 129 -------------PVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVI 175
Query: 244 KHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+HPMDLGT+K K+TSG YS P FAADVRLTFSNAMTYNPP NDV++MADTLRK+FEVRW
Sbjct: 176 EHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRW 235
Query: 304 KAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEE 363
K +EKKL T T PS D E + +P KK+K + + + +P +RVMT+E+
Sbjct: 236 KTLEKKLSGTKVHTE-PSNLDAHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKRVMTDED 294
Query: 364 KRILSTELEALLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDY 421
+ L +LE+L E P +I+FL++H++ G G+DE+EIDI+ LSD LF LR LLD++
Sbjct: 295 RLKLGKDLESLT-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEH 353
Query: 422 LLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAI 481
L E Q K+++ PCE+E+L+ S NSSMQ C G++L DE VDI G N+ P + I PV I
Sbjct: 354 LREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDI-GENEHPTSSISPVTI 412
Query: 482 EKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANL 541
EKD NS +S S S + SS P A+K + E ++ GA
Sbjct: 413 EKDLVLGNSNGNSLGSVSGDPKMSSL-----------PRASKGLGTIDL--EPMLDGA-- 457
Query: 542 DEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAAL 601
+ P G SSV LDQ+E S K ++ AD +G SA +E+Q+ P+K YRAA+
Sbjct: 458 ----TSASPTRG-SSVGGLDQLESASPEKISSVEADCQQDGNSAQNEKQLPPEKSYRAAI 512
Query: 602 LRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKA 661
L+NRFAD ILKAREK L + + RDPEKL+ EREELE + ++EKARLQAEAKAAEEARRKA
Sbjct: 513 LKNRFADIILKAREKPLNQNDTRDPEKLQREREELELQKKKEKARLQAEAKAAEEARRKA 572
Query: 662 EAEAAAEAKRKR----ELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLP-S 716
EA+AAAEA + ELEREAARQAL ME++V++NEN++F+EDLE+L+ + L +
Sbjct: 573 EAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELNENAKFLEDLELLKTVDTDHLTNT 632
Query: 717 FTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGE 776
E PD L SF F GS NPLEQLGL+MK D+D+EE PLT+ P D+EEGE
Sbjct: 633 IEEEDGPDV---GLRSFSFGGS-NPLEQLGLFMKQDEDEEE--ADPLTSPAPEIDIEEGE 686
Query: 777 ID 778
ID
Sbjct: 687 ID 688
>gi|7573452|emb|CAB87766.1| kinase-like protein [Arabidopsis thaliana]
Length = 703
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 345/727 (47%), Positives = 448/727 (61%), Gaps = 68/727 (9%)
Query: 67 ASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKK 126
SE S KRK + FGV VL LS +S ++R+ L +L+ +LEQ+RV QK
Sbjct: 30 VSEGSNCSKRKV-------GETFGVSKMVLPLSGLSSSDRKELIRRLRQELEQIRVFQKN 82
Query: 127 VASLSSNVVLSPSSD---IRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKK 183
LS V L+ SS R + G R GP + P P
Sbjct: 83 F-ELSRTVALTSSSASGLTRVKSFGMSR----CSTGPGKTVNPISAASKPT--------- 128
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI 243
+++ +LMKQCE LL RLMSHQ+GWVFNTPVDV+KLNI DYF VI
Sbjct: 129 -------------PVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVI 175
Query: 244 KHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+HPMDLGT+K K+TSG YS P FAADVRLTFSNAMTYNPP NDV++MADTLRK+FEVRW
Sbjct: 176 EHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRW 235
Query: 304 KAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEE 363
K +EKKL T T PS D E + +P KK+K + + + +P +RVMT+E+
Sbjct: 236 KTLEKKLSGTKVHTE-PSNLDAHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKRVMTDED 294
Query: 364 KRILSTELEALLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDY 421
+ L +LE+ L E P +I+FL++H++ G G+DE+EIDI+ LSD LF LR LLD++
Sbjct: 295 RLKLGKDLES-LTEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEH 353
Query: 422 LLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAI 481
L E Q K+++ PCE+E+L+ S NSSMQ C G++L DE VDI G N+ P + I PV I
Sbjct: 354 LREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDI-GENEHPTSSISPVTI 412
Query: 482 EKDAANRNSK-----CSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLV 536
EKD NS C++ SS +S GS SG D +S+P + +
Sbjct: 413 EKDLVLGNSNDYPLGCTTDCSSFDAYNLGNS---LGSVSG---DPKMSSLPRASKGLGTI 466
Query: 537 SGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKL 596
+ + + P G SSV LDQ+E S K ++ AD +G SA +E+Q+ P+K
Sbjct: 467 DLEPMLDGATSASPTRG-SSVGGLDQLESASPEKISSVEADCQQDGNSAQNEKQLPPEKS 525
Query: 597 YRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEE 656
YRAA+L+NRFAD ILKAREK L + + RDPEKL+ EREELE + ++EKARLQAEAKAAEE
Sbjct: 526 YRAAILKNRFADIILKAREKPLNQNDTRDPEKLQREREELELQKKKEKARLQAEAKAAEE 585
Query: 657 ARRKAEAEAAAEAKRKR----ELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDE 712
ARRKAEA+AAAEA + ELEREAARQAL ++V++NEN++F+EDLE+L+ +
Sbjct: 586 ARRKAEAQAAAEAAAEAKRKLELEREAARQALM---ESVELNENAKFLEDLELLKTVDTD 642
Query: 713 QLP-SFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKD 771
L + E PD L SF F GS NPLEQLGL+MK D+D+EE PLT+ P D
Sbjct: 643 HLTNTIEEEDGPDV---GLRSFSFGGS-NPLEQLGLFMKQDEDEEE--ADPLTSPAPEID 696
Query: 772 VEEGEID 778
+EEGEID
Sbjct: 697 IEEGEID 703
>gi|413941779|gb|AFW74428.1| hypothetical protein ZEAMMB73_413666 [Zea mays]
Length = 757
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 372/816 (45%), Positives = 490/816 (60%), Gaps = 120/816 (14%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAP-KRKCISLN 82
MGK+ ++SKGH GFVPDYRH VE M ES+G GS R+D S SCAP KRKC+S+N
Sbjct: 1 MGKTNRFSKGHQLGFVPDYRHGVEAMGESKGLGSPPRID-----SGSSCAPPKRKCVSVN 55
Query: 83 ID---GYDNFGVPL--QVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLS 137
+ G F +P +V +L +M++ +++ LE+KL+ +L QVR +Q ++ S V ++
Sbjct: 56 SEEGEGASGFSMPRAREVFSLPRMTRLDKKDLEMKLRHELAQVRDVQSRLFLRGSAVSMN 115
Query: 138 PSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGA 197
++ + SV P+ + PK K + QT +G A
Sbjct: 116 GAA-------------VASV--PAGDVQPKKKVEKLKRSDSVQTDRGAPPPAATVVAAPV 160
Query: 198 ASSSNAML-MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
ASS N KQC NLL +MSH + F PVD++KLNIPDYF ++K PMDLGTI+ K+
Sbjct: 161 ASSVNYTSSFKQCANLLKSIMSHVWAGPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKKL 220
Query: 257 TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP----- 311
+G YS P FAADVRLTFSNAM YNP NDVH+MA TL K FE RWK IEKKLP
Sbjct: 221 KAGMYSTPREFAADVRLTFSNAMNYNPVNNDVHLMAKTLSKNFETRWKLIEKKLPKPDDK 280
Query: 312 --------------------VTV---DMTAVPSRA-----DDMIETETRMGMPPM--KKK 341
V V D+T D+ + P + KK+
Sbjct: 281 PQPVEKPPVREPTEKNSTKGVAVEKEDITKKKPSKKSVPKQDIFQEGYSADNPVLQPKKR 340
Query: 342 KVSP--KETKIKAEPV---RRVMTNEEKRILSTELEALLEELPESIIDFLKEH-SAGETG 395
K SP ++ + + V +R+MT+E+K +S L++ +P+ +++F++ +
Sbjct: 341 KTSPLIQDASLVEDVVPTGKRMMTSEQKYDISARLQSFGAFIPDHVVEFIRSRVDDCDAD 400
Query: 396 EDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPG-------PCEMEVLNESGLSNS 448
E+E+E+DID L DDTLF L++LLDDY + NP P E E ++ L N
Sbjct: 401 EEEMELDIDVLGDDTLFELQQLLDDY------DRVNPSRNLTKEDPHEAESRSQYELINP 454
Query: 449 SMQLCK-GNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSS 507
S +C GN+L+DEDVDI G NDPP+ +PPV +E + A+RNSK S+SSSSSS+S SSSS
Sbjct: 455 S--VCNDGNELIDEDVDI-GENDPPILALPPVVLEDETADRNSKHSTSSSSSSDSESSSS 511
Query: 508 DSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNS 567
DSDS SSSGS+ DA KA + +E ++ +D++K +SL + L
Sbjct: 512 DSDSSSSSGSDADA-KAPQQNSGSKEKVLPVDGVDQEK------------DSLSTLNLPE 558
Query: 568 QG-KPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDP 626
Q P+++ ADG EG + SE+QVSPDK RAALLR+RFADTILKAREKAL++ K+DP
Sbjct: 559 QSTNPISVSADG--EGGNV-SEKQVSPDKQIRAALLRSRFADTILKAREKALDQTTKKDP 615
Query: 627 EKLRIEREELERRHREEKARLQAEAKAAEEARRK----AEAEAAAEAKRKRELEREAARQ 682
EKLR EREELER REE+ARLQAEAKAAE+ R++ A AEAAAEAKR+RELEREAAR+
Sbjct: 616 EKLRREREELERVQREERARLQAEAKAAEDVRKRAEAAAAAEAAAEAKRQRELEREAARK 675
Query: 683 ALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPL 742
ALQ MEKTVDINE S F++DLEML EQ+P+ E SP FQ +N L
Sbjct: 676 ALQEMEKTVDINEGSHFLKDLEMLGSVTGEQIPNLVGETSP----------GFQMGSNTL 725
Query: 743 EQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
E+LGLYMK D+DDE+ EP+ DVEEGEID
Sbjct: 726 EKLGLYMKNDEDDEDGD----FTDEPVADVEEGEID 757
>gi|334185652|ref|NP_001189985.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|332643764|gb|AEE77285.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 764
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 332/700 (47%), Positives = 418/700 (59%), Gaps = 66/700 (9%)
Query: 81 LNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKK----------VASL 130
LN + D +GV QV++L MSQ+ER+ L +LK +LEQ +++ K V+S
Sbjct: 2 LNSNDEDPYGVQRQVISLYNMSQSERKDLIYRLKLELEQTKIVLKNAELQRMNPAAVSST 61
Query: 131 SSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLE 190
S V S I S K+P +VG V G R N +G SG+ E
Sbjct: 62 SDRVGFSTGQKISSRVSNSKKPSDFAVGSGKKVRHQNGTSRGWN--------RGTSGKFE 113
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
K S+ N LMKQC+ LL +L SH WVF PVDV+KLNIPDY T IKHPMDLG
Sbjct: 114 SSKET-MTSTPNITLMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLG 172
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
T+K + SG YS P FAADVRLTF+NAMTYNPP +DVHIM D L K FE RWK I+KKL
Sbjct: 173 TVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKL 232
Query: 311 PVTVDMT--AVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILS 368
P T AV +D E + + +PP KK+K++ + EPV+ +MT E+ L
Sbjct: 233 PPCSMQTLPAVTLEPND--ERKAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLG 290
Query: 369 TELEALLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQ 426
+LE+LL+ELP IIDFLK+H++ GE EDE+EIDID LSD+ L LR LLD+Y+ K+
Sbjct: 291 RQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKE 350
Query: 427 QKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAA 486
KQ N PCE+E++N S SNSS+Q +GN++ DE VD GN+PP++
Sbjct: 351 AKQTNVEPCEIELINGSRPSNSSLQ--RGNEMADEYVD---GNEPPIS------------ 393
Query: 487 NRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKS 546
SSS SS D + + D++K AN S A DE
Sbjct: 394 ---------RSSSDSDSGSSEDQSDDAKPMVQGDSSKMPETAN-------SEAQRDENTR 437
Query: 547 EGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRF 606
+G+ S +L+Q+++ SQ K + +DG HEG E S +K YRAALL+NRF
Sbjct: 438 IDDLFVGSQSTGALEQMDICSQQKLSSDESDGQHEGNIL--ETPASSEKRYRAALLKNRF 495
Query: 607 ADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEK----ARLQAEAKAAEEARRKA 661
AD ILKAREK L + G K DPE+LR EREEL + ++EK A +A A +A +A
Sbjct: 496 ADIILKAREKPLPQNGIKGDPERLRKEREELVLQKKKEKARLQAEAEAAEDARRQAEAEA 555
Query: 662 EAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEA 721
AEAAAEAKRKRELEREAARQAL MEKTV+INENSRF+EDLEML + EQLPS E
Sbjct: 556 AAEAAAEAKRKRELEREAARQALLKMEKTVEINENSRFLEDLEMLSSSAPEQLPSSAEET 615
Query: 722 SPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEP 761
SP+ D LGSF +GS NPLEQLGLYMK DDD+EE P
Sbjct: 616 SPERPLDALGSFNLRGS-NPLEQLGLYMKQDDDEEEPEAP 654
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 728 DRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
D GSF +GS NPLEQLGLYMK DDD+EE P DVEEGEID
Sbjct: 717 DAFGSFNLKGS-NPLEQLGLYMKQDDDEEEPEAP--AVPNLANDVEEGEID 764
>gi|357144539|ref|XP_003573328.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 777
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 373/836 (44%), Positives = 486/836 (58%), Gaps = 140/836 (16%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNI 83
MGK++K+SKGH GFVPDYR+ VET G + +V A ++ KRKCI+LN
Sbjct: 1 MGKTQKFSKGHPVGFVPDYRYGVET-------GGASKVPPVNPARTEA---KRKCINLNT 50
Query: 84 D-GYD--NFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSS 140
+ G D F VP +V LS+MS ++R+ LE+KL+ +LEQVR LQ ++ S
Sbjct: 51 EEGGDAPGFNVPREVFELSRMSVSDRKDLEMKLRQELEQVRALQNRLFS----------- 99
Query: 141 DIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP--QTKKGNSGR-LEPKKPAGA 197
R L S+ G + AP G N ++G ++ SGR L A
Sbjct: 100 ----------RGALTSMNG-ATSSAPGGDFNG-NKKDGKLKRSYSVQSGRGLMSSMAQPA 147
Query: 198 ASSSN-AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
SS N A L K+C++LL LM H++G F+ PVD +KLNIPDYF ++KHPMDLGTI+ K+
Sbjct: 148 VSSINYAPLFKKCQDLLRNLMRHRYGQTFSIPVDPVKLNIPDYFDIVKHPMDLGTIQKKL 207
Query: 257 TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL------ 310
SG Y P FAADVRLTFSNA+ YNP N VH MA T+ +FE RWK IEKKL
Sbjct: 208 NSGSYPTPWEFAADVRLTFSNAILYNPHNNVVHQMAKTMSSHFEPRWKPIEKKLPRPEEE 267
Query: 311 PVTVD-----------------MTAVPSR--------------------ADDMIETETRM 333
P V+ + VPS A+ +++ + R
Sbjct: 268 PSVVEPSIVEPSDKGAVEKNLIVNKVPSEKKPSNKGAYKKGSFQKEEAVANPVLQPKKRK 327
Query: 334 GMPPMKKKKVSPKETKIKA------------------EPVR----RVMTNEEKRILSTEL 371
P ++ V+P+ ++ PVR +MT+++K LS L
Sbjct: 328 ASPLVQDAPVAPEVQMVQVVEDAPVAPAVQVPQVAEDAPVRPTDMEMMTDKQKVDLSVRL 387
Query: 372 EALLEELPESIIDFLKEHSAGETGEDELE--IDIDALSDDTLFALRKLLDDYLLEKQQKQ 429
++ +PE +++F++ H + DE E ID++AL D TLF L+KLLDDY +++
Sbjct: 388 QSYGGFIPEHVVEFIRRHLNDDNDADEDELTIDMNALDDPTLFELQKLLDDY--DRENPS 445
Query: 430 ANPGP---CEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAA 486
NP E+E NE GL +SSM GN+LV+ED+DI GGND P+ PPV E + A
Sbjct: 446 GNPTKDEYHEVEFQNEYGLRDSSMHHEAGNELVEEDIDI-GGNDLPLLTYPPVVFESETA 504
Query: 487 NRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKS 546
+R+SK SSSSSSSSESGSSSSDS S S S + K P +EN +S +LD++
Sbjct: 505 DRSSKHSSSSSSSSESGSSSSDSSSSSGSDLD---VKVPPPNIGAKENTLSVVSLDQE-- 559
Query: 547 EGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRF 606
N S N+L+ E ++ PV I AD E S E+QVSPDK YRAALL++RF
Sbjct: 560 -------NDSRNTLNITEQSTD--PVLISADNEDENVS---EKQVSPDKKYRAALLKSRF 607
Query: 607 ADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEE----ARRKAE 662
ADTILKAREKAL++ ++DPEK++ EREELER REE+ARLQAEAKAAE+ A A
Sbjct: 608 ADTILKAREKALDQVAQKDPEKVQREREELERLQREERARLQAEAKAAEDARRRAEAVAA 667
Query: 663 AEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEAS 722
AEAAAEAKR+RELEREAAR+ALQ MEKTV+INE S F++D EML EQ P E +
Sbjct: 668 AEAAAEAKRQRELEREAARKALQQMEKTVEINEGSLFLKDFEMLGTVAGEQHPDLVGEMN 727
Query: 723 PDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
P H + LG FQ NPLEQLGLYMK DD+++EEV +A EP DVEEGEID
Sbjct: 728 PTHTPEGLG---FQLGGNPLEQLGLYMKNDDEEDEEVG---SAYEPTVDVEEGEID 777
>gi|297797327|ref|XP_002866548.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312383|gb|EFH42807.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 486
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/470 (51%), Positives = 324/470 (68%), Gaps = 17/470 (3%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNI 83
MGK+RK+S+G SSGFVPDY AVET+ E + F SGR+D+ M SE S KR+ LN
Sbjct: 1 MGKARKHSRGRSSGFVPDYMQAVETI-EPDEFVYSGRIDSVMKHSEASPPLKRRRFGLN- 58
Query: 84 DGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDI 142
D+ GV +VL+LSKMS++ER++L KLK +L+QVR L KK+AS SS+ V+LSP +DI
Sbjct: 59 --GDSNGVSKEVLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDAVLLSPYNDI 116
Query: 143 RSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSN 202
SC+DG +RP E+ + +GKKR P + +TKKG P + S+
Sbjct: 117 HSCSDGPRRPPPENFAK---FVGSQGKKRPPVRNDKHRTKKG------PSRLNVPTISTV 167
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A +MK+CE LL RL SH+ GW F TPVD + LNIPDYFTVIKHPMDLGTI+ ++ G+YS
Sbjct: 168 ASVMKECETLLNRLWSHKLGWAFRTPVDPVMLNIPDYFTVIKHPMDLGTIRSRLRKGEYS 227
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
PL FAADVRLTFSN++ YNPP N H MA + KYFE WK+IEKK+PVT +P
Sbjct: 228 SPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFETGWKSIEKKIPVT-KPPVIPLT 286
Query: 323 ADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESI 382
+ +E+E + P++ K + E+K++ EP + VMT++EK+ LS +L AL EE P++I
Sbjct: 287 SSASLESEIPFEVAPLRNKSAAMNESKLRVEPAKLVMTDDEKKKLSQDLVALEEEFPQNI 346
Query: 383 IDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVL 440
D L+E S G++ E E+EIDI+ LSD+TLF +RKLLDDYL EK++ PCEME++
Sbjct: 347 SDLLREQSGSDGQSEEVEIEIDIETLSDETLFMVRKLLDDYLREKKKSLEKSEPCEMEIV 406
Query: 441 NESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNS 490
++SG SNS +Q KG+ +DEDVDIVGGNDP V+ PP+ IEKDAA RN+
Sbjct: 407 HDSGFSNSPLQASKGDLQIDEDVDIVGGNDPSVSSYPPLKIEKDAACRNN 456
>gi|413921385|gb|AFW61317.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 770
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 357/832 (42%), Positives = 476/832 (57%), Gaps = 138/832 (16%)
Query: 23 MMGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAP-KRKCISL 81
MMGK+ +SKGH GFVPDYRH VE M E + GS RVD S C P KRKC+S+
Sbjct: 1 MMGKTHMFSKGHPLGFVPDYRHRVEAMGEFKRLGSPVRVD-----SGSYCPPPKRKCVSV 55
Query: 82 NID------GYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVV 135
N + G+ VP +V +L M+ +++ +E++L +L QV+ LQ ++ S NV
Sbjct: 56 NSEERECASGFSLTRVPREVFSLPSMTALDKKDVEMRLHHELAQVKDLQIRLFSGGHNV- 114
Query: 136 LSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKG----KKRAPNGR--NGPQTKKGNSGRL 189
S+ G +V AP KK+A R N QT +G +
Sbjct: 115 -------------------GSMNGATVASAPGSDMLPKKKAEKLRRSNSVQTDRGAPPPM 155
Query: 190 EPKKPAGAASSSNAML-MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+SS N KQC NLL LMSH + F PVD++KLNIPDYF ++K PMD
Sbjct: 156 ATAVAPPVSSSINYTSSFKQCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMD 215
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
LGTI+ ++ +G YS P FAADVRLTFSNAM YNP NDVH+MA TL K FE RWK IEK
Sbjct: 216 LGTIQKRMKAGMYSTPPEFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEK 275
Query: 309 --------------KLPVTVDMTAV--PSRADD-------------------------MI 327
K P V+ V P++ + +
Sbjct: 276 KLPKPDEKPPQPDEKPPQPVEKPPVRKPTKKNSTKRVSIEKEDLTKKKPSKKSVPKQYIF 335
Query: 328 ETETRMGMPPM--KKKKVSP--KETKIKAEPV---RRVMTNEEKRILSTELEALLEELPE 380
E P + KK+K SP ++ + + V +R+MT+E+K LS L++ +P+
Sbjct: 336 RGEDSADSPVLQPKKRKTSPLVQDAPLVGDIVPTRKRIMTSEQKYDLSARLQSYGAFIPD 395
Query: 381 SIIDFLKEHS-AGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPG------ 433
+++ ++ H+ + E+ELE+D+DAL DDTLF L +LLDDY + NP
Sbjct: 396 HVVELIRSHADYCDANEEELELDMDALGDDTLFELLRLLDDY------DRVNPSRNLTEQ 449
Query: 434 -PCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKC 492
P E++ ++ L N+S+ + N+L DEDVDI G NDPPV PP+ +E + A+R+ K
Sbjct: 450 DPHEVKSRSQYELINASVCNEEVNELFDEDVDI-GENDPPVLTFPPLVLEDETADRSRKH 508
Query: 493 SSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDI 552
S+SSSSSS+S SSSS S S SSSGS+ DA A ++N VS ++K V +
Sbjct: 509 SASSSSSSDSESSSSGSGSSSSSGSDTDA-------KAAQQNSVS-----KEKILPVDGL 556
Query: 553 GNSSVNSLDQVELNSQGK-PVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTIL 611
G+ +SLD + L Q PV++ A GE +VSP+K RAALLR+RFADTIL
Sbjct: 557 GHEK-DSLDTLNLPEQSTDPVSVSA----YGEGGYVSEKVSPEKQIRAALLRSRFADTIL 611
Query: 612 KAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRK----AEAEAAA 667
KAREKAL++ K+DPEKLR EREELER R+E+ARLQAEAKAAE+A ++ A AEAAA
Sbjct: 612 KAREKALDQTTKKDPEKLRREREELERLQRQERARLQAEAKAAEDACKRAEEAAAAEAAA 671
Query: 668 EAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQ 727
EAKR+R++EREAAR+ALQ ME+TVDIN S F++DLEMLR E++P+ E SP
Sbjct: 672 EAKRQRDIEREAARKALQEMERTVDINGGSHFLKDLEMLRGITCEEMPNLVGEGSPG--- 728
Query: 728 DRLGSFKFQ-GSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
FQ GS+N L +LGLYMK D+DDEE L + D+EEGEID
Sbjct: 729 -------FQLGSSNALAKLGLYMKDDEDDEEGD---LADAPVVVDIEEGEID 770
>gi|238481625|ref|NP_001154792.1| nuclear protein X1 [Arabidopsis thaliana]
gi|238481627|ref|NP_001154793.1| nuclear protein X1 [Arabidopsis thaliana]
gi|10177441|dbj|BAB10737.1| unnamed protein product [Arabidopsis thaliana]
gi|50253452|gb|AAT71928.1| At5g63330 [Arabidopsis thaliana]
gi|60543335|gb|AAX22265.1| At5g63330 [Arabidopsis thaliana]
gi|332010350|gb|AED97733.1| nuclear protein X1 [Arabidopsis thaliana]
gi|332010351|gb|AED97734.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 477
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/470 (49%), Positives = 314/470 (66%), Gaps = 26/470 (5%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNI 83
MGK+RK+S+G SGFVPDY AVE + F S R++ SE S KR+ LN
Sbjct: 1 MGKARKHSRGRPSGFVPDYMQAVEP----DEFVYSERMN-----SEASPPLKRRRFGLN- 50
Query: 84 DGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDI 142
DN GV +VL+LSKMS++ER++L KLK +L+QVR L KK+AS SS+ V+LSP +D
Sbjct: 51 --GDNNGVSKEVLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDTVLLSPYND- 107
Query: 143 RSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSN 202
SC+DG +RP E+ + + +GKKR P + + KKG P + S +
Sbjct: 108 HSCSDGPRRPPPENF---ATFVGSQGKKRPPVRSDKQRNKKG------PSRLNVPTSYTV 158
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A +MK+CE LL RL SH+ GW F TPVD + LNIPDYF VIKHPMDLGTI+ ++ G+YS
Sbjct: 159 ASVMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYS 218
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
PL FAADVRLTFSN++ YNPP N H MA + KYFE WK+IEKK+P++ +P
Sbjct: 219 SPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMS-KPPVIPLT 277
Query: 323 ADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESI 382
+ +E+E + PM+KK+ + + K++ EP + VMT+ EK+ L +L AL E+ P+ I
Sbjct: 278 SSASLESEIPFEVAPMRKKEAAMNDNKLRVEPAKLVMTDGEKKKLGQDLMALEEDFPQKI 337
Query: 383 IDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVL 440
D L+E S G++GE E+EIDI+ALSD+ LF +RKLLDDYL EK++ PCEME++
Sbjct: 338 ADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKSMEKSEPCEMEIV 397
Query: 441 NESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNS 490
++SG SNS +Q KG+ +DEDVDIVGGNDP V+ PP+ IEKDAA RN+
Sbjct: 398 HDSGFSNSPLQPSKGDLQIDEDVDIVGGNDPSVSSHPPLKIEKDAACRNN 447
>gi|297828570|ref|XP_002882167.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
gi|297328007|gb|EFH58426.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 288/698 (41%), Positives = 393/698 (56%), Gaps = 114/698 (16%)
Query: 87 DNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCN 146
+ FGVP VL LS +S +ER+ L L+ +LEQ+R QK + L + +++P S+ S
Sbjct: 33 ETFGVPRMVLPLSDLSSSERKKLIHTLRQELEQIRSFQKSLVDLPMSNIVTPVSNNMS-- 90
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
RP +S P GK+ P P EP ++S + M
Sbjct: 91 ----RP--KSFRMARCSTGP-GKRVLPFSATKP----------EP------VTTSTMLRM 127
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
KQCE LL RLMS Q W+FNTPVD++KLNIPDYFT+IKHPMDLGT+K K+TSG YS P
Sbjct: 128 KQCETLLKRLMSQQHCWLFNTPVDMVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSE 187
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDM 326
F+ADVRLTF NAMTYNP N+V+ ADTL K+FEVRWK KK T + PS +
Sbjct: 188 FSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTFNKKSSGT---KSEPSNLGTL 244
Query: 327 IETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFL 386
+ M P KK+K++ EP +RVMT+E++ L +L +L E P II+FL
Sbjct: 245 ARKDIAMPEPLAKKRKMNAVNHDSLLEPAKRVMTDEDRVKLGRDLGSL-TEFPVQIINFL 303
Query: 387 KEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESG 444
++HS+ G +G+DE+EIDI+ LS D LF LR L D E L E+
Sbjct: 304 RDHSSKEGRSGDDEIEIDINDLSHDALFQLRDLFD------------------EFLRENQ 345
Query: 445 LSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGS 504
+ + + C +++++ G+ P +S + GS
Sbjct: 346 RKDINGEPC--------ELELLDGSGP----------------------GNSLTQHCGGS 375
Query: 505 SSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVE 564
D D + P ++ +P+ E++ VSG L+Q+E
Sbjct: 376 EMEDEDVDIGNYEHP---RSHIPSVRTEKDSVSG---------------------LNQLE 411
Query: 565 LNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKR 624
S+G + ADGH +G SAP+E+Q+ P+K YRAALL++RFAD ILKA+E L + EKR
Sbjct: 412 DASKGSLIE-GADGHLDGNSAPNEKQLPPEKRYRAALLKDRFADIILKAKEITLNQNEKR 470
Query: 625 DPEKLRIEREELERRHREEKARLQ----AEAKAAEEARRKAEAEAAAEAKRKRELEREAA 680
DPEKLR E+EE+E + ++EKARLQ +A +A +A EAAAEAKRK ELER+AA
Sbjct: 471 DPEKLRREKEEIELQKKKEKARLQAEAKEAEEARRKAEAQAAVEAAAEAKRKLELERKAA 530
Query: 681 RQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTN 740
RQAL MEK+V+INEN+RF++DLE+L+ + +QL + S D L F F GS N
Sbjct: 531 RQALLEMEKSVEINENTRFLKDLELLKTVKTDQLRNLRDVGSD---SDGLEVFGFGGS-N 586
Query: 741 PLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
PLEQLGL+MK D+D++E L +P +VEEGEID
Sbjct: 587 PLEQLGLFMKHDEDEDE--ADLLAFPDPGNEVEEGEID 622
>gi|222422933|dbj|BAH19453.1| AT5G14270 [Arabidopsis thaliana]
Length = 549
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 264/573 (46%), Positives = 344/573 (60%), Gaps = 56/573 (9%)
Query: 67 ASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKK 126
SE S KRK + FGV VL LS +S ++R+ L +L+ +LEQ+RV QK
Sbjct: 30 VSEGSNCSKRKV-------GETFGVSKMVLPLSGLSSSDRKELIRRLRQELEQIRVFQKN 82
Query: 127 VASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNS 186
LS V L+ SS G R ++S G P GK P
Sbjct: 83 F-ELSRTVALTSSS-----ASGLTR--VKSFGMSRCSTGP-GKTVNP------------- 120
Query: 187 GRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
+ +++ +LMKQCE LL RLMSHQ+GWVFNTPVDV+KLNI DYF VI+HP
Sbjct: 121 --ISAASKPTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHP 178
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
MDLGT+K K+TSG YS P FAADVRLTFSNAMTYNPP NDV++MADTLRK+FEVRWK +
Sbjct: 179 MDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTL 238
Query: 307 EKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRI 366
EKKL T T PS D E + +P KK+K + + + +P +RVMT+E++
Sbjct: 239 EKKLSGTKVHTE-PSNLDAHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKRVMTDEDRLK 297
Query: 367 LSTELEALLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLE 424
L +LE+ L E P +I+FL++H++ G G+DE+EIDI+ LSD LF LR LLD++L E
Sbjct: 298 LGKDLES-LTEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLRE 356
Query: 425 KQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKD 484
Q K+++ PCE+E+L+ S NSSMQ C G++L DE VDI G N+ P + I PV IEKD
Sbjct: 357 IQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDI-GENEHPTSSISPVTIEKD 415
Query: 485 AANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEK 544
NS +S S S + SS P A+K + E ++ GA
Sbjct: 416 LVLGNSNGNSLGSVSGDPKMSSL-----------PRASKGLGTIDL--EPMLDGA----- 457
Query: 545 KSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRN 604
+ P G SSV LDQ+E S K ++ AD +G SA +E+Q+ P+K YRAA+L+N
Sbjct: 458 -TSASPTRG-SSVGGLDQLESASPEKISSVEADCQQDGNSAQNEKQLPPEKSYRAAILKN 515
Query: 605 RFADTILKAREKALEKGEKRDPEKLRIEREELE 637
RFAD ILKAREK L + + RDPEKL+ EREELE
Sbjct: 516 RFADIILKAREKPLNQNDTRDPEKLQREREELE 548
>gi|115447147|ref|NP_001047353.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|47497295|dbj|BAD19337.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848299|dbj|BAD22163.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|113536884|dbj|BAF09267.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|222623188|gb|EEE57320.1| hypothetical protein OsJ_07416 [Oryza sativa Japonica Group]
Length = 714
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 355/806 (44%), Positives = 460/806 (57%), Gaps = 120/806 (14%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGF-GSSG 59
M PTV ++F Q+Q K+ G +G +S Y ET+ ESEG GS
Sbjct: 1 MTPTVLMEFGQQRQIKR-------GYDEMAFRGMASAAPRGY---AETVGESEGAAGSPV 50
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS APKRKCISLN DG+D V ++ +KMS +ERR L + +T+L+
Sbjct: 51 RVD-----SEDSSAPKRKCISLNSDGFD---VKREIFVPAKMSSSERRHLRKRFRTELDS 102
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK V P + + P L S AP+GKK G+ G
Sbjct: 103 VRNLLKK----PEFAVPVPVN---------RAPALSSSA------APRGKK----GQRGN 139
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP AS+ + + KQC+ +L +LM+ + +F++PVD +KLNIP
Sbjct: 140 HVVRGAKGRFLPTKPRPEASTVLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIP 199
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF +IK PMDLGTI+ K+ SG Y+ P FAADVRLTFSNAMTYNP + VH A L K
Sbjct: 200 DYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNK 259
Query: 298 YFEVRWKAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPMKKKKVS-----PKETKIK 351
FE RW+ IEKKL + + RAD R PP+ +VS P E+
Sbjct: 260 MFESRWRTIEKKLASIATEAHVEVDRAD-----SKRRKTPPVDCSEVSTECVRPTESVRP 314
Query: 352 AEPVRRVMTNEEKRILSTELEALLE--ELPESIIDFLKE---HSAGETGEDELEIDIDAL 406
E V+ MT EEK L +L E E+P IID L++ ++ + G+ E+EIDI A+
Sbjct: 315 TESVKPKMTFEEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAV 374
Query: 407 SDDTLFALRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDI 465
SDD LF L+K +D YL E++Q +QA P E E N SGLS+SS CKG D V+EDVDI
Sbjct: 375 SDDLLFELKKHVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDI 434
Query: 466 VGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDS----------DSGSSS 515
G + P+ IEKDA N +KC S SSSSS+SGSSSSDS + G S
Sbjct: 435 CG-------NASPILIEKDAHNNPNKCGSPSSSSSDSGSSSSDSESGSDSESEQEKGGSP 487
Query: 516 GSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQ---GKPV 572
G +P +K S E LV +++KS+ + + ++ D VEL Q KP
Sbjct: 488 G-KPKGSKRS-------EQLV-----EQEKSDVISPV--DAIRPADDVELREQDNESKPA 532
Query: 573 AIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIE 632
EGE++ +RQVSPDKL RAALLR+R+AD I+KA+ + G+K
Sbjct: 533 P-------EGENSKPDRQVSPDKLLRAALLRSRYADVIVKAQGILSQGGDK--------- 576
Query: 633 REELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVD 692
+EELE+ +EEKARL AE AA EA AEA AEAKRKR+LERE ARQALQ ME+TV+
Sbjct: 577 QEELEKLQKEEKARLLAEGNAAMEA---RRAEAEAEAKRKRDLEREKARQALQEMERTVE 633
Query: 693 INENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMD 752
IN+N ++DLEML A E + S E SP+H QD + SF GS NPLEQLGL+MK
Sbjct: 634 INDN-LHLKDLEMLGTATTEHIVSSVDETSPEHSQDGMPSF-LPGSGNPLEQLGLFMKA- 690
Query: 753 DDDEEEVEPPLTAKEPIKDVEEGEID 778
D++EEE +P ++ KD EEGEI+
Sbjct: 691 DEEEEEEDP--SSVPSTKDAEEGEIN 714
>gi|218191119|gb|EEC73546.1| hypothetical protein OsI_07959 [Oryza sativa Indica Group]
Length = 714
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 355/806 (44%), Positives = 460/806 (57%), Gaps = 120/806 (14%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGF-GSSG 59
M PTV ++F Q+Q K+ G +G +S Y ET+ ESEG GS
Sbjct: 1 MTPTVLMEFGQQRQIKR-------GYDEMAFRGMASAAPRGY---AETVGESEGAAGSPV 50
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS APKRKCISLN DG+D V ++ +KMS +ERR L + +T+L+
Sbjct: 51 RVD-----SEDSSAPKRKCISLNSDGFD---VKREIFVPAKMSSSERRHLRKRFRTELDS 102
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK V P + + P L S AP+GKK G+ G
Sbjct: 103 VRNLLKK----PEFAVPVPVN---------RAPALSSSA------APRGKK----GQRGN 139
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP AS+ + + KQC+ +L +LM+ + +F++PVD +KLNIP
Sbjct: 140 HVVRGAKGRFLPTKPRPEASTVLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIP 199
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF +IK PMDLGTI+ K+ SG Y+ P FAADVRLTFSNAMTYNP + VH A L K
Sbjct: 200 DYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNK 259
Query: 298 YFEVRWKAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPMKKKKVS-----PKETKIK 351
FE RW+ IEKKL + + RAD R PP+ +VS P E+
Sbjct: 260 MFESRWRTIEKKLASIATEAHVEVDRAD-----SKRRKTPPVDCSEVSTECVRPTESVRP 314
Query: 352 AEPVRRVMTNEEKRILSTELEALLE--ELPESIIDFLKE---HSAGETGEDELEIDIDAL 406
E V+ MT EEK L +L E E+P IID L++ ++ + G+ E+EIDI A+
Sbjct: 315 TESVKPKMTFEEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAV 374
Query: 407 SDDTLFALRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDI 465
SDD LF L+K +D YL E++Q +QA P E E N SGLS+SS CKG D V+EDVDI
Sbjct: 375 SDDLLFELKKHVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDI 434
Query: 466 VGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDS----------DSGSSS 515
G + P+ IEKDA N +KC S SSSSS+SGSSSSDS + G S
Sbjct: 435 CG-------NASPILIEKDAHNNPNKCGSPSSSSSDSGSSSSDSESGSDSESEQEKGGSP 487
Query: 516 GSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQ---GKPV 572
G +P +K S E LV +++KS+ + + ++ D VEL Q KP
Sbjct: 488 G-KPKGSKRS-------EQLV-----EQEKSDVISPV--DAIRPADVVELREQDNESKPA 532
Query: 573 AIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIE 632
EGE++ +RQVSPDKL RAALLR+R+AD I+KA+ + G+K
Sbjct: 533 P-------EGENSKPDRQVSPDKLLRAALLRSRYADVIVKAQGILSQGGDK--------- 576
Query: 633 REELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVD 692
+EELE+ +EEKARL AE AA EA AEA AEAKRKR+LERE ARQALQ ME+TV+
Sbjct: 577 QEELEKLQKEEKARLLAEGNAAMEA---RRAEAEAEAKRKRDLEREKARQALQEMERTVE 633
Query: 693 INENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMD 752
IN+N ++DLEML A E + S E SP+H QD + SF GS NPLEQLGL+MK
Sbjct: 634 INDN-LHLKDLEMLGTATTEHIVSSVDETSPEHSQDGMPSF-LPGSGNPLEQLGLFMKA- 690
Query: 753 DDDEEEVEPPLTAKEPIKDVEEGEID 778
D++EEE +P ++ KD EEGEI+
Sbjct: 691 DEEEEEEDP--SSVPSTKDAEEGEIN 714
>gi|449492943|ref|XP_004159148.1| PREDICTED: transcription factor GTE9-like [Cucumis sativus]
Length = 491
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/472 (49%), Positives = 312/472 (66%), Gaps = 34/472 (7%)
Query: 76 RKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVV 135
R+C+S + D + VP QVL L+ + Q+ER+ L +L+ +L+Q++ L+KKV L ++
Sbjct: 2 RRCVSFSSDNREGLRVPTQVLPLTSLLQSERKDLIYRLRKELQQIQTLRKKVELLRTHSF 61
Query: 136 L----SPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGN-SGRLE 190
S + +G +++ P+ G+++ PN P KKG S R+
Sbjct: 62 TVSSSSDILSCSNVRNGPSAECIKNTANPT-----SGQRKKPNV---PSHKKGQGSSRVA 113
Query: 191 PKK--PAGAASSSN------AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTV 242
K PA AS SN A+LMKQCE LL R+MSHQ+ WVFNTPVDV+KLN+PDYFT+
Sbjct: 114 SDKVGPAAQASVSNTSTATSAILMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTI 173
Query: 243 IKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
IKHPMDLGT+K K++SG YS PL F ADVRLTFSNAMTYNPP NDVH+MAD L YF++R
Sbjct: 174 IKHPMDLGTVKSKLSSGAYSSPLDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMR 233
Query: 303 WKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNE 362
WKAIEKKLP T D ++P+++ + ET + P+KK KV+ + ++ P + VMT+E
Sbjct: 234 WKAIEKKLPKT-DGHSLPTKSRPREDVETVKNV-PLKKMKVASRPQEVTPIPSKLVMTDE 291
Query: 363 EKRILSTELEALLEELPESIIDFLKEHSAG--ETGEDELEIDIDALSDDTLFALRKLLDD 420
EK L ELE+LL E+P IIDFL+E S+G E GEDE EIDID LSDDTLF LRKLLDD
Sbjct: 292 EKLSLGRELESLLGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDTLFKLRKLLDD 351
Query: 421 YLLEKQQKQANPGPC--EMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPP 478
+ EKQ+ A+ PC E+++LN+SG+SNSSMQ KG++ +DED++ GGN+ PV+ P
Sbjct: 352 HFQEKQKNNASAEPCVIELQMLNDSGVSNSSMQPSKGSEPIDEDLN-GGGNEAPVSSCAP 410
Query: 479 VAIEK---DAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVP 527
+ IE+ DA +RN KC +SS +S +S SS S++D S G P VP
Sbjct: 411 MEIERSAMDAIHRNRKC-TSSRNSKDSDSSCSEND--SECGKTPSQVHEQVP 459
>gi|13699186|dbj|BAB41205.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 714
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 353/806 (43%), Positives = 456/806 (56%), Gaps = 120/806 (14%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGF-GSSG 59
M PTV ++F Q+Q K+ G +G +S Y ET+ ESEG GS
Sbjct: 1 MTPTVLMEFGQQRQIKR-------GYDEMAFRGMASAAPRGY---AETVGESEGAAGSPV 50
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS APKRKCISLN DG+D V ++ +KMS +ERR L + +T+L+
Sbjct: 51 RVD-----SEDSSAPKRKCISLNSDGFD---VKREIFVPAKMSSSERRHLRKRFRTELDS 102
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK V P + + P L S AP+GKK G+ G
Sbjct: 103 VRNLLKK----PEFAVPVPVN---------RAPALSSSA------APRGKK----GQRGN 139
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP AS+ + + KQC+ +L +LM+ + +F++PVD +KLNIP
Sbjct: 140 HVVRGAKGRFLPTKPRPEASTVLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIP 199
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF +IK PMDLGTI+ K+ SG Y+ P FAADVRLTFSNAMTYNP + VH A L K
Sbjct: 200 DYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNK 259
Query: 298 YFEVRWKAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPMKKKKVS-----PKETKIK 351
FE RW+ IEKKL + + RAD R PP+ +VS P E+
Sbjct: 260 MFESRWRTIEKKLASIATEAHVEVDRAD-----SKRRKTPPVDCSEVSTECVRPTESVRP 314
Query: 352 AEPVRRVMTNEEKRILSTELEALLE--ELPESIIDFLKE---HSAGETGEDELEIDIDAL 406
E V+ MT EEK L +L E E+P IID L++ ++ + G+ E+EIDI A+
Sbjct: 315 TESVKPKMTFEEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAV 374
Query: 407 SDDTLFALRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDI 465
SDD LF L+K +D YL E++Q +QA P E E N SGLS+SS CKG D V+EDVDI
Sbjct: 375 SDDLLFELKKHVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDI 434
Query: 466 VGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDS----------DSGSSS 515
G + P+ IEKDA N +KC S SSSSS+SGSSSSDS + G S
Sbjct: 435 CG-------NASPILIEKDAHNNPNKCGSPSSSSSDSGSSSSDSESGSDSESEQEKGGSP 487
Query: 516 GSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQ---GKPV 572
G +P +K S E LV +++KS+ + + ++ D VEL Q KP
Sbjct: 488 G-KPKGSKRS-------EQLV-----EQEKSDVISPV--DAIRPADDVELREQDNESKPA 532
Query: 573 AIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIE 632
EGE++ +RQVSPDKL R A LR+R+AD I+KA+ + G+K
Sbjct: 533 P-------EGENSKPDRQVSPDKLLRTAFLRSRYADVIVKAQGILSQGGDK--------- 576
Query: 633 REELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVD 692
+EELE+ +EEKARL AE AA EA AEA AEAKRKR+LERE ARQALQ ME+TV+
Sbjct: 577 QEELEKLQKEEKARLLAEGNAAMEA---RRAEAEAEAKRKRDLEREKARQALQEMERTVE 633
Query: 693 INENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMD 752
IN+N ++DLEML A E + S E SP+H QD + SF GS NPLEQLGL+MK
Sbjct: 634 INDN-LHLKDLEMLGTATTEHIVSSVDETSPEHSQDGMPSF-LPGSGNPLEQLGLFMKA- 690
Query: 753 DDDEEEVEPPLTAKEPIKDVEEGEID 778
D++EEE +P KD EEGEI+
Sbjct: 691 DEEEEEEDPSCVPS--TKDAEEGEIN 714
>gi|357149985|ref|XP_003575300.1| PREDICTED: transcription factor GTE9-like [Brachypodium distachyon]
Length = 705
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 339/788 (43%), Positives = 444/788 (56%), Gaps = 93/788 (11%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGR 60
M PTV ++ Q+Q K+ G +G ++ R ET+ ES GS R
Sbjct: 1 MTPTVLMECGPQRQIKR-------GYDEMTCRGVAAA---PPRGYAETVGES---GSPVR 47
Query: 61 VDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQV 120
VD SEDS APKRKCISLN DG+D V ++ SKMS +ERR L + + +L+ V
Sbjct: 48 VD-----SEDSSAPKRKCISLNSDGFD---VKREIFVPSKMSSSERRYLRKRFRAELDSV 99
Query: 121 RVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQ 180
R L KK L V P+S + P S P PK +R G
Sbjct: 100 RDLLKKPEFL----VTMPAS---------RAPAFSSSAAPR----PKKVQR------GSH 136
Query: 181 TKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
+G GR P KP ++ A ++KQCE +L +LM+ ++ +FN PVDV KLNIPD
Sbjct: 137 VVRGAKGRFLPTKPRPETTTVLPEAAVLKQCEAILKKLMTQKYSHIFNVPVDVEKLNIPD 196
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y ++KHPMDLGTIK K+ SG Y+ P +FAADVRLTF+NA+TYNP + VH MA L K
Sbjct: 197 YNDIVKHPMDLGTIKKKLDSGSYTSPSSFAADVRLTFNNAITYNPRGHAVHDMAIQLNKI 256
Query: 299 FEVRWKAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRR 357
FE RWK +EKKL T D RAD R PP+ +S E E V+
Sbjct: 257 FESRWKTVEKKLASATADPHVEVDRAD-----SKRRKTPPVDCSDLS-MECVRPTEIVKP 310
Query: 358 VMTNEEKRILSTELEALLE--ELPESIIDFLKE----HSAGETGEDELEIDIDALSDDTL 411
MT EEK L +L E ELP IID L++ + G+ E+EIDI ALSDD L
Sbjct: 311 TMTFEEKESFGNCLASLSEDPELPGYIIDLLQQCIDSSNTDHLGDGEIEIDIHALSDDIL 370
Query: 412 FALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDP 471
L+K + YL E+ + P E E +N SGLS+SS CKG + V+EDVDI G
Sbjct: 371 LELKKQVGKYLQERDNQPTKSEPSENEAVNVSGLSHSSTNPCKGGEPVEEDVDICG---- 426
Query: 472 PVTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAV 531
+ P+ IEKD+ + SKC S SSSSS+SGSSSSDSDSGS S SE + K P V
Sbjct: 427 ---NASPILIEKDSQIKASKCGSPSSSSSDSGSSSSDSDSGSDSESE--SEKVGSPTKLV 481
Query: 532 EENLVSGANLDEKKSEGVPDI-GNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQ 590
+ + +++KS+ + I N + ++ E +S+ K EGE+A +R+
Sbjct: 482 KGIKIPEQPAEQEKSDVISPIDANHTAADVELREQDSESKAAP-------EGENAKPDRE 534
Query: 591 VSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAE 650
VSPDKL RAA+LR R+AD I+KAR + G+K EELE+ +EEK RL AE
Sbjct: 535 VSPDKLLRAAVLRGRYADVIVKARGILSQGGDK---------HEELEKLQKEEKERLLAE 585
Query: 651 AKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQ 710
AA EA +AEA AE+KRKR+LERE ARQALQ MEKTV+IN+N + ++LEML A
Sbjct: 586 GNAAMEA---RKAEAEAESKRKRDLEREKARQALQEMEKTVEINDNV-YPKELEMLGTAT 641
Query: 711 DEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIK 770
E + S E SP+H QD + SF GS + LE+LGL+MK+D+++EEE + + K
Sbjct: 642 TEHIVSSVDETSPEHSQDGMPSF-LPGSGSMLEKLGLFMKVDEEEEEEEPNSIPSS---K 697
Query: 771 DVEEGEID 778
D EEGEI+
Sbjct: 698 DAEEGEIN 705
>gi|413937647|gb|AFW72198.1| global transcription factor group E [Zea mays]
Length = 696
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 322/774 (41%), Positives = 430/774 (55%), Gaps = 99/774 (12%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESE-GFGSSG 59
M PTV ++F GQ++ K +M+ + S G+ ET+ ES GS
Sbjct: 1 MTPTVLMEF-GQQRPMKRGYEEMV-----FRAASSRGYA-------ETVGESGVAAGSPL 47
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS PKRKCISLN G+D V ++L SKMS +ERR L + + +L+
Sbjct: 48 RVD-----SEDSSVPKRKCISLNSVGFD---VKREILVPSKMSSSERRYLRKRFRAELDS 99
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK ++ V L+ + P L S AP+ KK + R G
Sbjct: 100 VRDLLKK-PEFAAPVPLN------------RAPALSSSA------APRAKKPQKSQRGGT 140
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP S+ S A KQCE +L +LM+ ++ +FN PVD++KL IP
Sbjct: 141 NVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEAILKKLMTQKYSHIFNVPVDIVKLQIP 200
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF ++K PMDLGT+K K+ SG Y+ P FAADVRLTF+NAM YNP + VH MA L K
Sbjct: 201 DYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNK 260
Query: 298 YFEVRWKAIEKKLPVTVDMTAVP-SRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
FE RW+ IEKKL V RAD R PP+ + VS E + EP
Sbjct: 261 MFESRWRPIEKKLASAATEKHVEVDRAD-----SKRRKTPPVDRSDVS-MECARQTEPET 314
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE---HSAGETGEDELEIDIDALSDDTLFA 413
MT EE+ L ++ +ELP I + L++ +A +G+ E+EIDI A+SDD LF
Sbjct: 315 PKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADLSGDGEIEIDIHAVSDDLLFE 374
Query: 414 LRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
L+K +D YL EK+Q +Q P E E +N SGLS+SS CKG + ++EDVDI G
Sbjct: 375 LKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDICG----- 429
Query: 473 VTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVE 532
+ P+ ++KDA RNSKC S SSSSS+S SSSSDSDSGS S SE + K P +
Sbjct: 430 --NASPIMLDKDAQIRNSKCGSPSSSSSDSESSSSDSDSGSDSESE--SEKVGSPGKLAK 485
Query: 533 ENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPS----- 587
++++KS D + +P AIV + ES P+
Sbjct: 486 GTKKPDQLVEQEKS--------------DVISPADANRPAAIVGLHGEDSESKPAPGGEN 531
Query: 588 ---ERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEK 644
+ QVSPD+L RAALLR+R+AD I+KAR + G+K +EELE+ +EEK
Sbjct: 532 SEPDTQVSPDRLLRAALLRSRYADVIVKARGILSQGGDK---------QEELEKLQKEEK 582
Query: 645 ARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLE 704
RL AE AA EA AEA AE KRKR ERE ARQALQ ME+TV+IN+N ++DLE
Sbjct: 583 ERLLAEGTAAMEA---CRAEAEAEKKRKRNFEREKARQALQEMERTVEINDNLH-LKDLE 638
Query: 705 MLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEE 758
+L A E + S E SP+ D + + G+ NPLEQLGL++K+DD++++E
Sbjct: 639 LLGTATTEHIVSSVDETSPERSHDGMAGY-HPGAVNPLEQLGLFIKVDDEEDDE 691
>gi|306922427|ref|NP_001105214.2| LOC542112 [Zea mays]
Length = 696
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 320/774 (41%), Positives = 429/774 (55%), Gaps = 99/774 (12%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESE-GFGSSG 59
M PTV ++F GQ++ K +M+ + S G+ ET+ ES GS
Sbjct: 1 MTPTVLMEF-GQQRPMKRGYEEMV-----FRAASSRGYA-------ETVGESGVAAGSPL 47
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS PKRKCISLN G+D V ++L SKMS +ERR L + + +L+
Sbjct: 48 RVD-----SEDSSVPKRKCISLNSVGFD---VKREILVPSKMSSSERRYLRKRFRAELDS 99
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK ++ V L+ + P L S AP+ KK + R G
Sbjct: 100 VRDLLKK-PEFAAPVPLN------------RAPALSSSA------APRAKKPQKSQRGGT 140
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP S+ S A KQCE +L +LM+ ++ +FN PVD++KL IP
Sbjct: 141 NVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEAILKKLMTQKYSHIFNVPVDIVKLQIP 200
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF ++K PMDLGT+K K+ SG Y+ P FAADVRLTF+NAM YNP + VH MA L K
Sbjct: 201 DYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNK 260
Query: 298 YFEVRWKAIEKKLPVTVDMTAVP-SRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
FE RW+ IEKKL V RAD R PP+ + VS E + EP
Sbjct: 261 MFESRWRPIEKKLASAATEKHVEVDRADS-----KRRKTPPVDRSDVS-MECARQTEPET 314
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE---HSAGETGEDELEIDIDALSDDTLFA 413
MT EE+ L ++ +ELP I + L++ +A +G+ E+EIDI A+SDD LF
Sbjct: 315 PKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADLSGDGEIEIDIHAVSDDLLFE 374
Query: 414 LRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
L+K +D YL EK+Q +Q P E E +N SGLS+SS CKG + ++EDVDI G
Sbjct: 375 LKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDICG----- 429
Query: 473 VTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVE 532
+ + J+KDA RNSKC S SSSSS+S SSSSDSDSGS S SE + K P +
Sbjct: 430 --NASXIMJDKDAQIRNSKCGSPSSSSSDSESSSSDSDSGSDSESE--SEKVGSPGKLAK 485
Query: 533 ENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPS----- 587
+++++S D + +P AIV + ES P+
Sbjct: 486 GTKKPDQLVEQERS--------------DVISPADANRPAAIVGLHGEDSESKPAPGGEN 531
Query: 588 ---ERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEK 644
+ QVSPD+L RAALLR+R+AD I+KAR + G+K +EELE+ +EEK
Sbjct: 532 SEPDTQVSPDRLLRAALLRSRYADVIVKARGILSQGGDK---------QEELEKLQKEEK 582
Query: 645 ARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLE 704
RL AE AA EA AEA AE KRKR ERE ARQALQ ME+TV+IN+N ++DLE
Sbjct: 583 ERLLAEGTAAMEA---CRAEAEAEKKRKRNFEREKARQALQEMERTVEINDN-LHLKDLE 638
Query: 705 MLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEE 758
+L A E + S E SP+ D + + G+ NPLEQLGL++K+DD++++E
Sbjct: 639 LLGTATTEHIVSSVDETSPERSHDGMAGY-HPGAVNPLEQLGLFIKVDDEEDDE 691
>gi|29569106|gb|AAO84020.1| global transcription factor group E [Zea mays]
Length = 696
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 321/774 (41%), Positives = 427/774 (55%), Gaps = 99/774 (12%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESE-GFGSSG 59
M PTV ++F GQ++ K +M+ + S G+ ET+ ES GS
Sbjct: 1 MTPTVLMEF-GQQRPMKRGYEEMV-----FRAASSRGYA-------ETVGESGVAAGSPL 47
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS PKRKCISLN G+D V ++L SKMS +ERR L + + +L+
Sbjct: 48 RVD-----SEDSSVPKRKCISLNSVGFD---VKREILVPSKMSSSERRYLRKRFRAELDS 99
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK ++ V L+ + P L S AP+ KK + R G
Sbjct: 100 VRDLLKK-PEFAAPVPLN------------RAPALSSSA------APRAKKPQKSQRGGT 140
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP S+ S A KQCE +L +LM+ ++ +FN PVD++KL IP
Sbjct: 141 NVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEAILKKLMTQKYSHIFNVPVDIVKLQIP 200
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF ++K PMDLGT+K K+ SG Y+ P FAADVRLTF+NAM YNP + VH MA L K
Sbjct: 201 DYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNK 260
Query: 298 YFEVRWKAIEKKLPVTVDMTAVP-SRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
FE RW+ IEKKL V RAD R PP+ + VS E + EP
Sbjct: 261 MFESRWRPIEKKLASAATEKHVEVDRADS-----KRRKTPPVDRSDVS-MECARQTEPET 314
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE---HSAGETGEDELEIDIDALSDDTLFA 413
MT EE+ L ++ +ELP I + L++ +A +G+ E+EIDI A+SDD LF
Sbjct: 315 PKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADLSGDGEIEIDIHAVSDDLLFE 374
Query: 414 LRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
L+K +D YL EK+Q +Q P E E +N SGLS+SS CKG + ++EDVDI G
Sbjct: 375 LKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDICGNASXI 434
Query: 473 VTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVE 532
+ D KDA RNSKC S SSSSS+S SSSSDSDSGS S SE + K P +
Sbjct: 435 MXD-------KDAQIRNSKCGSPSSSSSDSESSSSDSDSGSDSESE--SEKVGSPGKLAK 485
Query: 533 ENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPS----- 587
+++++S D + +P AIV + ES P+
Sbjct: 486 GTKKPDQLVEQERS--------------DVISPADANRPAAIVGLHGEDSESKPAPGGEN 531
Query: 588 ---ERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEK 644
+ QVSPD+L RAALLR+R+AD I+KAR + G+K +EELE+ +EEK
Sbjct: 532 SEPDTQVSPDRLLRAALLRSRYADVIVKARGILSQGGDK---------QEELEKLQKEEK 582
Query: 645 ARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLE 704
RL AE AA EA AEA AE KRKR ERE ARQALQ ME+TV+IN+N ++DLE
Sbjct: 583 ERLLAEGTAAMEA---CRAEAEAEKKRKRNFEREKARQALQEMERTVEINDN-LHLKDLE 638
Query: 705 MLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEE 758
+L A E + S E SP+ D + + G+ NPLEQLGL++K+DD++++E
Sbjct: 639 LLGTATTEHIVSSVDETSPERSHDGMAGY-HPGAVNPLEQLGLFIKVDDEEDDE 691
>gi|17064912|gb|AAL32610.1| Unknown protein [Arabidopsis thaliana]
gi|20259928|gb|AAM13311.1| unknown protein [Arabidopsis thaliana]
Length = 503
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/446 (48%), Positives = 277/446 (62%), Gaps = 30/446 (6%)
Query: 42 YRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKM 101
YR+ E ESEG GSS ++DTE+TASE+S P RKCI LN + D +GV QV++L M
Sbjct: 12 YRNTFEAPEESEGSGSSAQIDTEVTASENSSTPARKCIMLNSNDEDPYGVQRQVISLYNM 71
Query: 102 SQTERRSLELKLKTDLEQVRVLQKK----------VASLSSNVVLSPSSDIRSCNDGQKR 151
SQ+ER+ L +LK +LEQ +++ K V+S S V S I S K+
Sbjct: 72 SQSERKDLIYRLKLELEQTKIVLKNAELQRMNPAAVSSTSDRVGFSTGQKISSRVSNSKK 131
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P +VG V G R N +G SG+ E K S+ N LMKQC+
Sbjct: 132 PSDFAVGSGKKVRHQNGTSRGWN--------RGTSGKFESSKET-MTSTPNITLMKQCDT 182
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL +L SH WVF PVDV+KLNIPDY T IKHPMDLGT+K + SG YS P FAADV
Sbjct: 183 LLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADV 242
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMT--AVPSRADDMIET 329
RLTF++AMTYNPP +DVHIM D L K FE RWK I+KKLP T AV +D E
Sbjct: 243 RLTFTDAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPND--ER 300
Query: 330 ETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEH 389
+ + +PP KK+K++ + EPV+ +MT E+ L +LE+LL+ELP IIDFLK+H
Sbjct: 301 KAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKH 360
Query: 390 SA--GETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSN 447
++ GE EDE+EIDID LSD+ L LR LLD+Y+ K+ KQ N PCE+E++N S SN
Sbjct: 361 NSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVEPCEIELINGSRPSN 420
Query: 448 SSMQLCKGNDLVDEDVDIVGGNDPPV 473
SS+Q +GN++ DE VD GN+PP+
Sbjct: 421 SSLQ--RGNEMADEYVD---GNEPPI 441
>gi|413937648|gb|AFW72199.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 728
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 322/790 (40%), Positives = 431/790 (54%), Gaps = 115/790 (14%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESE-GFGSSG 59
M PTV ++F GQ++ K +M+ + S G+ ET+ ES GS
Sbjct: 17 MTPTVLMEF-GQQRPMKRGYEEMV-----FRAASSRGYA-------ETVGESGVAAGSPL 63
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS PKRKCISLN G+D V ++L SKMS +ERR L + + +L+
Sbjct: 64 RVD-----SEDSSVPKRKCISLNSVGFD---VKREILVPSKMSSSERRYLRKRFRAELDS 115
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK ++ V L+ + P L S AP+ KK + R G
Sbjct: 116 VRDLLKK-PEFAAPVPLN------------RAPALSSSA------APRAKKPQKSQRGGT 156
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP S+ S A KQCE +L +LM+ ++ +FN PVD++KL IP
Sbjct: 157 NVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEAILKKLMTQKYSHIFNVPVDIVKLQIP 216
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF ++K PMDLGT+K K+ SG Y+ P FAADVRLTF+NAM YNP + VH MA L K
Sbjct: 217 DYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNK 276
Query: 298 YFEVRWKAIEKKLPVTVDMTAVP-SRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
FE RW+ IEKKL V RAD R PP+ + VS E + EP
Sbjct: 277 MFESRWRPIEKKLASAATEKHVEVDRADS-----KRRKTPPVDRSDVS-MECARQTEPET 330
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE---HSAGETGEDELEIDIDALSDDTLFA 413
MT EE+ L ++ +ELP I + L++ +A +G+ E+EIDI A+SDD LF
Sbjct: 331 PKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADLSGDGEIEIDIHAVSDDLLFE 390
Query: 414 LRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
L+K +D YL EK+Q +Q P E E +N SGLS+SS CKG + ++EDVDI G
Sbjct: 391 LKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDICG----- 445
Query: 473 VTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVE 532
+ P+ ++KDA RNSKC S SSSSS+S SSSSDSDSGS S SE + K P +
Sbjct: 446 --NASPIMLDKDAQIRNSKCGSPSSSSSDSESSSSDSDSGSDSESE--SEKVGSPGKLAK 501
Query: 533 ENLVSGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPS----- 587
++++KS D + +P AIV + ES P+
Sbjct: 502 GTKKPDQLVEQEKS--------------DVISPADANRPAAIVGLHGEDSESKPAPGGEN 547
Query: 588 ---ERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEK 644
+ QVSPD+L RAALLR+R+AD I+KAR + G+K +EELE+ +EEK
Sbjct: 548 SEPDTQVSPDRLLRAALLRSRYADVIVKARGILSQGGDK---------QEELEKLQKEEK 598
Query: 645 ARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQ----------------MME 688
RL AE AA EA AEA AE KRKR ERE ARQALQ +ME
Sbjct: 599 ERLLAEGTAAMEA---CRAEAEAEKKRKRNFEREKARQALQEASVDLTHQQLQFLILIME 655
Query: 689 KTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLY 748
+TV+IN+N ++DLE+L A E + S E SP+ D + + G+ NPLEQLGL+
Sbjct: 656 RTVEINDNLH-LKDLELLGTATTEHIVSSVDETSPERSHDGMAGY-HPGAVNPLEQLGLF 713
Query: 749 MKMDDDDEEE 758
+K+DD++++E
Sbjct: 714 IKVDDEEDDE 723
>gi|224060209|ref|XP_002300086.1| global transcription factor group [Populus trichocarpa]
gi|222847344|gb|EEE84891.1| global transcription factor group [Populus trichocarpa]
Length = 630
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/405 (54%), Positives = 273/405 (67%), Gaps = 39/405 (9%)
Query: 87 DNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSN-VVLSPSSDIRSC 145
D FGVP+Q+ + S +S +ER+ LE +L+ +LEQVR LQK+V +N V LS SSDI SC
Sbjct: 21 DTFGVPVQIFSPSHLSPSERKDLEQRLRWELEQVRNLQKRVDLQRTNGVTLSSSSDILSC 80
Query: 146 NDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAML 205
++G RP +E+ SV+ + GKK P + N +L
Sbjct: 81 SNGTNRPRIETFRKSSVMTSGPGKKTTP-------------------------ITPNIIL 115
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
MKQCE LL RLMSHQ+GWVFN+PVD++KLNIPDY+TVIK+PMDLGTIK KI+SG YS PL
Sbjct: 116 MKQCETLLKRLMSHQYGWVFNSPVDIVKLNIPDYYTVIKNPMDLGTIKSKISSGAYSSPL 175
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV----TVDMTAVPS 321
F ADVRLTF NAM YNP +D +IMADTL K+FE+RWKAIEKKLP + + P
Sbjct: 176 EFMADVRLTFKNAMVYNPQGSDAYIMADTLNKFFEMRWKAIEKKLPRAGGEVLQENSGPH 235
Query: 322 RADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPES 381
+ ET P KK+KV+ + I EP +R MT+EE+ L ELE+LL E+P +
Sbjct: 236 EDFETAETS------PAKKRKVTSFQHDIMPEPGKRGMTDEERLNLGRELESLLGEMPVN 289
Query: 382 IIDFLKEH--SAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEV 439
IIDFL+EH S GE+E+EIDID LSDDTLF LRKLLDDYL EK++ Q PCE+E+
Sbjct: 290 IIDFLREHCSSGRHGGEEEIEIDIDELSDDTLFTLRKLLDDYLQEKRKNQTRGEPCEIEL 349
Query: 440 LNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKD 484
LNESG SNSSMQ KGNDL DE++DI GGN PPV+ PV IEK+
Sbjct: 350 LNESGPSNSSMQQKKGNDLGDEEIDI-GGNGPPVSSYQPVEIEKE 393
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 170/219 (77%), Gaps = 3/219 (1%)
Query: 560 LDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALE 619
LDQ+E SQ K ++ +D +GESAPS+ QVS +K R AL++NRFADTILKA+EK+L
Sbjct: 415 LDQLEQTSQEKLSSVESDCQQDGESAPSDSQVSLEKRIRHALIKNRFADTILKAKEKSLS 474
Query: 620 KGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREA 679
+G+K DP+KL+ EREELE ++EKARL AEA+AAE+A+R+AEA AAAEA+RKRELEREA
Sbjct: 475 QGDKGDPQKLQREREELELHKKKEKARLLAEAQAAEDAQRQAEAAAAAEARRKRELEREA 534
Query: 680 ARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGST 739
ARQAL MEKTV+INENS+F+EDLEMLR+ E +P E SPD QD LG FKF G+
Sbjct: 535 ARQALLKMEKTVEINENSQFLEDLEMLRVVPAEHVPISVDETSPDPSQDGLGGFKF-GAC 593
Query: 740 NPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
NPLEQLGL+MK DD+EEE PL P+ +VEEGEID
Sbjct: 594 NPLEQLGLFMK--DDEEEEEGEPLNVLNPLNEVEEGEID 630
>gi|242065686|ref|XP_002454132.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
gi|241933963|gb|EES07108.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
Length = 711
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 334/787 (42%), Positives = 449/787 (57%), Gaps = 85/787 (10%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESE-GFGSSG 59
M PTV ++F GQ + K +M R + S G+ ET+ ESE GS
Sbjct: 1 MTPTVLMEF-GQHRPIKRGYEEMA--FRGVAAATSRGYT-------ETVGESEVAAGSPV 50
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS APKRKCISLN DG+D V ++ SKMS +ERR L + + +L+
Sbjct: 51 RVD-----SEDSWAPKRKCISLNSDGFD---VKREIFVPSKMSSSERRYLRKRFRAELDS 102
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK ++ V LS + P L S AP+ KK + R
Sbjct: 103 VRDLLKK-PEFAAPVPLS------------RAPALSSSA------APRAKKPQKSQRGVT 143
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP ++ S A + KQCE +L +LM+ ++ +FN PVDV KL IP
Sbjct: 144 NVIRGAKGRFLPTKPRPEPTTVLSEAAVFKQCEAILKKLMTQKYSHIFNVPVDVDKLQIP 203
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF ++K PMDLGT++ K+ SG Y+ P FAADVRLTF+NAM YNP + VH MA L K
Sbjct: 204 DYFDIVKTPMDLGTVQKKLESGSYTSPSDFAADVRLTFNNAMAYNPKGHAVHDMAIQLNK 263
Query: 298 YFEVRWKAIEKKLPVTVDMTAVP-SRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
FE RW+ IEKKL V RAD R PP+ + VS + + + EP +
Sbjct: 264 MFESRWRPIEKKLASAATEKHVEVDRADS-----KRRKTPPVDRSDVSTEGVR-QTEPEK 317
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGET---GEDELEIDIDALSDDTLFA 413
MT EE+ L ++ +ELP I + L++ T G+ E+EIDI A+SDD LF
Sbjct: 318 PKMTAEEREAFGNSLASISDELPPHIFELLQQCIDSNTDMPGDGEIEIDIQAVSDDMLFE 377
Query: 414 LRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
L+K +D YL E++Q +Q P E E +N SGLS+SS CKG + ++EDVDI G
Sbjct: 378 LKKHVDKYLQEREQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDICG----- 432
Query: 473 VTDIPPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVE 532
+ P+ ++KDA R+SKC S SSSSS+S SSSSDSDSGS S SE + K P +
Sbjct: 433 --NASPIMLDKDAQIRSSKCGSPSSSSSDSESSSSDSDSGSDSESE--SEKVGSPGKLAK 488
Query: 533 ENLVSGANLDEKKSEGV-PDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQV 591
++++KS+ + P N + + +S+ KP A G GE++ + QV
Sbjct: 489 GTKKPDQLVEQEKSDVISPADANRPADIVGLHGEDSESKP----APG---GENSKPDSQV 541
Query: 592 SPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEA 651
SPD+L RAALLR+R+AD I+KAR + G+K +EELE+ +EEKARL AE
Sbjct: 542 SPDRLLRAALLRSRYADVIVKARGILSQGGDK---------QEELEKLQKEEKARLLAEG 592
Query: 652 KAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQD 711
AA EA AEA AEAKRKR+ ERE ARQALQ ME+TV+IN+N ++DLEML A
Sbjct: 593 NAAMEA---RRAEAEAEAKRKRDFEREKARQALQEMERTVEINDNLH-IKDLEMLGTATT 648
Query: 712 EQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKD 771
E + S E SP+ QD + + GS NPLEQLGL++K DD++++E + + IK+
Sbjct: 649 EHIVSSVDETSPERSQDGMAGY-HPGSVNPLEQLGLFIKADDEEDDEEPSSVPS---IKE 704
Query: 772 VEEGEID 778
EEGEI+
Sbjct: 705 PEEGEIN 711
>gi|302764766|ref|XP_002965804.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
gi|300166618|gb|EFJ33224.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
Length = 706
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 278/729 (38%), Positives = 398/729 (54%), Gaps = 74/729 (10%)
Query: 101 MSQTERRSLELKLKTDLEQVRVLQKKVASL---SSNVVLSPSSDIRSCNDGQKRPLLESV 157
M + +R + +LK DLEQV + K+ +L S + + + ++ P +
Sbjct: 1 MPKESKREVRKRLKLDLEQVIGISTKIEALEQQSRSSGTLGTPGTGGSSKEKRTPKANQM 60
Query: 158 GGPSVVLAPKGKKRAPNGRNGPQT----KKGNSGRLEPKKPAGAASSSNAM--LMKQCEN 211
S + K K P + P+ KKG G ++ K+ + M +MKQC
Sbjct: 61 YSTSEYFSAKDKMPPPE-KVKPKALVPPKKGTKGDIDNKRQRVELARMKRMGDIMKQCGT 119
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL +L++H+ WVFN PVD +KL + DY VI+ PMDLGTIK K+ G Y P+ FA DV
Sbjct: 120 LLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKKKLEGGHYRTPVEFADDV 179
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETET 331
+LTFSNAMTYNPP +DV IMAD LR+ F+ RW+ I++KL + R +D + E
Sbjct: 180 KLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKL----EEEQTKCRVEDEVFAEI 235
Query: 332 RMGMP-------------------PMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELE 372
G P +KK +P+ +K +R MT EEK L LE
Sbjct: 236 AQGNPNPALQNLKQSLLSIEDQLSSLKKPAGAPRGSKKSG---KRQMTYEEKTELGKNLE 292
Query: 373 ALLEELP----ESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQ 427
+LE+ P + I+ LK+H+ ED +E+DID + +DTL+ L K++ + K +
Sbjct: 293 KVLEQNPGDKADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDTLWELHKMVASCMKPKNK 352
Query: 428 KQANPGPCE-MEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAA 486
K+ P P E ++ + +S + K + +DEDVDI G +D P + PV ++KD
Sbjct: 353 KRPRPQPAEGIKQTGGTAPGDSPKKSRKSGEGLDEDVDIDGEDDMPTANYSPVVVDKDTP 412
Query: 487 N-----------RNSKCSSSSSSSSESGSSSSDSDSGSSSGSE-PDAAKASVPANAVEEN 534
N +S SS S S S S SD++ ++G E P + K + AV E
Sbjct: 413 NDGRESSGGSSSSSSGSDSSESDSGSSSHSDSDAEGPRTAGIEKPTSQKEPMGFGAVREQ 472
Query: 535 LVSGAN-LDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSP 593
L S ++ +D K G + Q E ++ E SER VSP
Sbjct: 473 LSSPSDKIDGAKQPVTVRPGEAGDLPESQAEKSA---------------EKLQSERPVSP 517
Query: 594 DKLYRAALLRNRFADTILKAREKA--LEKGEKRDPEKLRIEREELERRHREEKARLQAEA 651
+K RAALL+ RFADTILKAREK L+ G+ DPEKLR EREELER+ RE+KARLQA+A
Sbjct: 518 EKSVRAALLKGRFADTILKAREKTFPLKSGDNVDPEKLRKEREELERKLREDKARLQADA 577
Query: 652 KAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQD 711
KAAE AR+KAEAEAA EA++KRE+EREAAR+ALQ ME+TVD++ + ++D +++R +
Sbjct: 578 KAAEVARKKAEAEAATEARKKREVEREAARKALQQMERTVDLDAHCEILKDFDLMRTSSK 637
Query: 712 EQLPSFTAEASPDHLQDRLGSFKF-QGSTNPLEQLGLYMKMD-DDDEEEVEPPLTAKEPI 769
E S E SP + D L F QG+ N LEQLGL+MK+D ++D+++ + + +
Sbjct: 638 EHFQSSAGEVSPPNSPDGLPGFTLPQGAGNALEQLGLFMKLDEEEDDKQGDGEVAYADEN 697
Query: 770 KDVEEGEID 778
+VEEGEID
Sbjct: 698 GEVEEGEID 706
>gi|302823131|ref|XP_002993220.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
gi|300138990|gb|EFJ05740.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
Length = 702
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 282/732 (38%), Positives = 396/732 (54%), Gaps = 84/732 (11%)
Query: 101 MSQTERRSLELKLKTDLEQVRVLQKKVASL---SSNVVLSPSSDIRSCNDGQKRPLLESV 157
M + +R + +LK DLEQV + K+ +L S + + + ++ P +
Sbjct: 1 MPKESKREVRKRLKLDLEQVIGISTKIEALEQQSRSSGTLGTPGTGGSSKEKRTPKANQM 60
Query: 158 GGPSVVLAPKGKKRAPNGRNGPQT----KKGNSGRLEPKKPAGAASSSNAM--LMKQCEN 211
S + K K P + P+ KKG G ++ K+ + M +MKQC
Sbjct: 61 YSTSEYFSAKDKMPPPE-KVKPKALVPPKKGTKGDIDNKRQRVELARMKRMGDIMKQCGT 119
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL +L++H+ WVFN PVD +KL + DY VI+ PMDLGTIK K+ G Y P+ FA DV
Sbjct: 120 LLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKKKLEGGHYRTPVEFADDV 179
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETET 331
+LTFSNAMTYNPP +DV IMAD LR+ F+ RW+ I++KL + R +D + E
Sbjct: 180 KLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKL----EEEQTKCRVEDEVFAEI 235
Query: 332 RMGMP-------------------PMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELE 372
G P +KK +P+ +K +R MT EEK L LE
Sbjct: 236 AQGNPNPALQNLKQSLLSIEDQLSSLKKPAGAPRGSKKSG---KRQMTYEEKTELGKNLE 292
Query: 373 ALLEELP----ESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQ 427
+LE+ P + I+ LK+H+ ED +E+DID + +DTL+ L K++ + K +
Sbjct: 293 KVLEQNPGDKADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDTLWELHKMVASCMKPKNK 352
Query: 428 KQANPGPCEMEVLNESG---------LSNSSMQLC--KGNDLVDEDVDIVGGNDPPVTDI 476
K+ P P E + ++G S SM L + + +DEDVDI G +D P +
Sbjct: 353 KRPRPQPAEG--IKQTGGTAPGDSPKKSRKSMFLSSRRRGEGLDEDVDIDGEDDMPTANY 410
Query: 477 PPVAIEKDAANRNSKCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLV 536
PV ++KD N + S SSSSS SS SS + A P A E
Sbjct: 411 SPVVVDKDTPNDGRESSGGSSSSSSGSDSSESDSGSSSH----SDSDAEGPRTAGIEKPT 466
Query: 537 SGANLDEKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVAD---GHHEGESA---PSERQ 590
S + D+G LN + K V++ D HE S+ SER
Sbjct: 467 SQKS----------DLGRLGTY------LNLKPKNVSVKRDDFLASHELCSSRELQSERP 510
Query: 591 VSPDKLYRAALLRNRFADTILKAREKA--LEKGEKRDPEKLRIEREELERRHREEKARLQ 648
VSP+K RAALL+ RFADTILKAREK L+ G+ DPEKLR EREELER+ RE+KARLQ
Sbjct: 511 VSPEKSVRAALLKGRFADTILKAREKTFPLKSGDNVDPEKLRKEREELERKLREDKARLQ 570
Query: 649 AEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRI 708
A+AKAAE AR+KAEAEAA EA++KRE+EREAAR+ALQ ME+TVD++ + ++D +++R
Sbjct: 571 ADAKAAEVARKKAEAEAATEARKKREVEREAARKALQQMERTVDLDAHCEILKDFDLMRT 630
Query: 709 AQDEQLPSFTAEASPDHLQDRLGSFKF-QGSTNPLEQLGLYMKMD-DDDEEEVEPPLTAK 766
+ E S E SP + D L F QG+ N LEQLGL+MK+D ++D+++ + +
Sbjct: 631 SSKEHFQSSAGEVSPPNSPDGLPGFTLPQGAGNALEQLGLFMKLDEEEDDKQGDGEVAYA 690
Query: 767 EPIKDVEEGEID 778
+ +VEEGEID
Sbjct: 691 DENGEVEEGEID 702
>gi|18395937|ref|NP_566151.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
gi|75163747|sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10;
AltName: Full=Bromodomain-containing protein GTE11;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E11
gi|16323117|gb|AAL15293.1| AT3g01770/F28J7_10 [Arabidopsis thaliana]
gi|20466526|gb|AAM20580.1| unknown protein [Arabidopsis thaliana]
gi|22136456|gb|AAM91306.1| unknown protein [Arabidopsis thaliana]
gi|332640191|gb|AEE73712.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
Length = 620
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 198/457 (43%), Positives = 260/457 (56%), Gaps = 59/457 (12%)
Query: 35 SSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQ 94
+ GF DY F S G D AS+D + FGVP
Sbjct: 5 NGGFPGDYNR--------NSFDSPGGCDDSPNASKDD---------------ETFGVPRI 41
Query: 95 VLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASL---SSNVVLSPSSDIRSCNDGQKR 151
VL LS +S +ERR L+ +LEQ+R QK V L S V +P+S++ R
Sbjct: 42 VLPLSDLSSSERRKWIHTLRQELEQLRSFQKSVGDLLPISKIVTSTPASNV-------SR 94
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P +S G P GK+ P P EP ++S + MKQCE+
Sbjct: 95 P--KSFGMSRCSTGP-GKRVLPFTATKP----------EP------VTTSTMLRMKQCES 135
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL RLMS Q W+FNTPVDV+KLNIPDYFT+IKHPMDLGT+K K+TSG YS P F+ADV
Sbjct: 136 LLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADV 195
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETET 331
RLTF NAMTYNP N+V+ ADTL K+FEVRWK IEKK T + PS + +
Sbjct: 196 RLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSSGT---KSEPSNLATLAHKDI 252
Query: 332 RMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSA 391
+ P KK+K++ + EP +RVMT+E++ L +L +L E P II+FL++HS+
Sbjct: 253 AIPEPVAKKRKMNAVKRNSLLEPAKRVMTDEDRVKLGRDLGSLT-EFPVQIINFLRDHSS 311
Query: 392 GE--TGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSS 449
E +G+DE+EIDI+ LS D LF LR L D++L E Q+K +N PC +E+L+ SG NS
Sbjct: 312 KEERSGDDEIEIDINDLSHDALFQLRDLFDEFLRENQKKDSNGEPCVLELLHGSGPGNSL 371
Query: 450 MQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAA 486
Q C G++L DEDVDI G + P++ I V EKD+
Sbjct: 372 TQHCDGSELEDEDVDI-GNYEHPISHISTVRTEKDSV 407
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 162/224 (72%), Gaps = 10/224 (4%)
Query: 556 SVNSLDQVELNSQGKPVAIV-ADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAR 614
SV L+Q+E S+GK I ADGH +G SAP E+++ P+K YRAALL+NRFAD ILKA+
Sbjct: 406 SVGGLNQMEDASRGKLSLIEGADGHQDGNSAPKEKELPPEKRYRAALLKNRFADIILKAQ 465
Query: 615 EKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRE 674
E L + EKRDPE L+ E+EELE + ++EKARLQAEAK AEEARRKAEA+ EAKRK E
Sbjct: 466 EITLNQNEKRDPETLQREKEELELQKKKEKARLQAEAKEAEEARRKAEAQ---EAKRKLE 522
Query: 675 LEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFK 734
LEREAARQAL MEK+V+INEN+RF++DLE+L+ +QL + S D L F
Sbjct: 523 LEREAARQALLEMEKSVEINENTRFLKDLELLKTVNTDQLRNLRDVGSE---SDGLAVFG 579
Query: 735 FQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
F GS NPLEQLGL+MK ++D++E L +P +VEEGEID
Sbjct: 580 FGGS-NPLEQLGLFMKHEEDEDE--SDMLAFPDPGNEVEEGEID 620
>gi|47497296|dbj|BAD19338.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848300|dbj|BAD22164.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|215768414|dbj|BAH00643.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 480
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 215/507 (42%), Positives = 280/507 (55%), Gaps = 68/507 (13%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESEGF-GSSG 59
M PTV ++F Q+Q K+ G +G +S Y ET+ ESEG GS
Sbjct: 1 MTPTVLMEFGQQRQIKR-------GYDEMAFRGMASAAPRGY---AETVGESEGAAGSPV 50
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS APKRKCISLN DG+D V ++ +KMS +ERR L + +T+L+
Sbjct: 51 RVD-----SEDSSAPKRKCISLNSDGFD---VKREIFVPAKMSSSERRHLRKRFRTELDS 102
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK V P + + P L S AP+GKK G+ G
Sbjct: 103 VRNLLKK----PEFAVPVPVN---------RAPALSSSA------APRGKK----GQRGN 139
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP AS+ + + KQC+ +L +LM+ + +F++PVD +KLNIP
Sbjct: 140 HVVRGAKGRFLPTKPRPEASTVLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIP 199
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF +IK PMDLGTI+ K+ SG Y+ P FAADVRLTFSNAMTYNP + VH A L K
Sbjct: 200 DYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNK 259
Query: 298 YFEVRWKAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPMKKKKVS-----PKETKIK 351
FE RW+ IEKKL + + RAD R PP+ +VS P E+
Sbjct: 260 MFESRWRTIEKKLASIATEAHVEVDRAD-----SKRRKTPPVDCSEVSTECVRPTESVRP 314
Query: 352 AEPVRRVMTNEEKRILSTELEALLE--ELPESIIDFLKE---HSAGETGEDELEIDIDAL 406
E V+ MT EEK L +L E E+P IID L++ ++ + G+ E+EIDI A+
Sbjct: 315 TESVKPKMTFEEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAV 374
Query: 407 SDDTLFALRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDI 465
SDD LF L+K +D YL E++Q +QA P E E N SGLS+SS CKG D V+EDVDI
Sbjct: 375 SDDLLFELKKHVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDI 434
Query: 466 VGGNDPPVTDIPPVAIEKDAANRNSKC 492
G + P+ IEKDA N +KC
Sbjct: 435 CG-------NASPILIEKDAHNNPNKC 454
>gi|219888341|gb|ACL54545.1| unknown [Zea mays]
gi|413937646|gb|AFW72197.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 538
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 205/500 (41%), Positives = 274/500 (54%), Gaps = 61/500 (12%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESE-GFGSSG 59
M PTV ++F GQ++ K +M+ + S G+ ET+ ES GS
Sbjct: 1 MTPTVLMEF-GQQRPMKRGYEEMV-----FRAASSRGYA-------ETVGESGVAAGSPL 47
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS PKRKCISLN G+D V ++L SKMS +ERR L + + +L+
Sbjct: 48 RVD-----SEDSSVPKRKCISLNSVGFD---VKREILVPSKMSSSERRYLRKRFRAELDS 99
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK ++ V L+ + P L S AP+ KK + R G
Sbjct: 100 VRDLLKK-PEFAAPVPLN------------RAPALSSSA------APRAKKPQKSQRGGT 140
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP S+ S A KQCE +L +LM+ ++ +FN PVD++KL IP
Sbjct: 141 NVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEAILKKLMTQKYSHIFNVPVDIVKLQIP 200
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF ++K PMDLGT+K K+ SG Y+ P FAADVRLTF+NAM YNP + VH MA L K
Sbjct: 201 DYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNK 260
Query: 298 YFEVRWKAIEKKLPVTVDMTAVP-SRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
FE RW+ IEKKL V RAD R PP+ + VS E + EP
Sbjct: 261 MFESRWRPIEKKLASAATEKHVEVDRADS-----KRRKTPPVDRSDVS-MECARQTEPET 314
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE---HSAGETGEDELEIDIDALSDDTLFA 413
MT EE+ L ++ +ELP I + L++ +A +G+ E+EIDI A+SDD LF
Sbjct: 315 PKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADLSGDGEIEIDIHAVSDDLLFE 374
Query: 414 LRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
L+K +D YL EK+Q +Q P E E +N SGLS+SS CKG + ++EDVDI G
Sbjct: 375 LKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDICG----- 429
Query: 473 VTDIPPVAIEKDAANRNSKC 492
+ P+ ++KDA RNSKC
Sbjct: 430 --NASPIMLDKDAQIRNSKC 447
>gi|413937645|gb|AFW72196.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 488
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 205/500 (41%), Positives = 274/500 (54%), Gaps = 61/500 (12%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESE-GFGSSG 59
M PTV ++F GQ++ K +M+ + S G+ ET+ ES GS
Sbjct: 1 MTPTVLMEF-GQQRPMKRGYEEMV-----FRAASSRGYA-------ETVGESGVAAGSPL 47
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS PKRKCISLN G+D V ++L SKMS +ERR L + + +L+
Sbjct: 48 RVD-----SEDSSVPKRKCISLNSVGFD---VKREILVPSKMSSSERRYLRKRFRAELDS 99
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK ++ V L+ + P L S AP+ KK + R G
Sbjct: 100 VRDLLKK-PEFAAPVPLN------------RAPALSSSA------APRAKKPQKSQRGGT 140
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP S+ S A KQCE +L +LM+ ++ +FN PVD++KL IP
Sbjct: 141 NVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEAILKKLMTQKYSHIFNVPVDIVKLQIP 200
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF ++K PMDLGT+K K+ SG Y+ P FAADVRLTF+NAM YNP + VH MA L K
Sbjct: 201 DYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNK 260
Query: 298 YFEVRWKAIEKKLPVTVDMTAVP-SRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
FE RW+ IEKKL V RAD R PP+ + VS E + EP
Sbjct: 261 MFESRWRPIEKKLASAATEKHVEVDRADS-----KRRKTPPVDRSDVS-MECARQTEPET 314
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE---HSAGETGEDELEIDIDALSDDTLFA 413
MT EE+ L ++ +ELP I + L++ +A +G+ E+EIDI A+SDD LF
Sbjct: 315 PKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADLSGDGEIEIDIHAVSDDLLFE 374
Query: 414 LRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
L+K +D YL EK+Q +Q P E E +N SGLS+SS CKG + ++EDVDI G
Sbjct: 375 LKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDICG----- 429
Query: 473 VTDIPPVAIEKDAANRNSKC 492
+ P+ ++KDA RNSKC
Sbjct: 430 --NASPIMLDKDAQIRNSKC 447
>gi|413937644|gb|AFW72195.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 494
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 205/500 (41%), Positives = 277/500 (55%), Gaps = 61/500 (12%)
Query: 1 MAPTVPIDFIGQKQSKKCLTSQMMGKSRKYSKGHSSGFVPDYRHAVETMAESE-GFGSSG 59
M PTV ++F GQ++ K +M+ ++ S+G++ ET+ ES GS
Sbjct: 1 MTPTVLMEF-GQQRPMKRGYEEMVFRAAS-SRGYA-----------ETVGESGVAAGSPL 47
Query: 60 RVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQ 119
RVD SEDS PKRKCISLN G+D V ++L SKMS +ERR L + + +L+
Sbjct: 48 RVD-----SEDSSVPKRKCISLNSVGFD---VKREILVPSKMSSSERRYLRKRFRAELDS 99
Query: 120 VRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGP 179
VR L KK ++ V L+ + P L S AP+ KK + R G
Sbjct: 100 VRDLLKK-PEFAAPVPLN------------RAPALSSSA------APRAKKPQKSQRGGT 140
Query: 180 QTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
+G GR P KP S+ S A KQCE +L +LM+ ++ +FN PVD++KL IP
Sbjct: 141 NVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEAILKKLMTQKYSHIFNVPVDIVKLQIP 200
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DYF ++K PMDLGT+K K+ SG Y+ P FAADVRLTF+NAM YNP + VH MA L K
Sbjct: 201 DYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNK 260
Query: 298 YFEVRWKAIEKKLPVTVDMTAVP-SRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
FE RW+ IEKKL V RAD R PP+ + VS E + EP
Sbjct: 261 MFESRWRPIEKKLASAATEKHVEVDRADS-----KRRKTPPVDRSDVS-MECARQTEPET 314
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE---HSAGETGEDELEIDIDALSDDTLFA 413
MT EE+ L ++ +ELP I + L++ +A +G+ E+EIDI A+SDD LF
Sbjct: 315 PKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADLSGDGEIEIDIHAVSDDLLFE 374
Query: 414 LRKLLDDYLLEKQQ-KQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPP 472
L+K +D YL EK+Q +Q P E E +N SGLS+SS CKG + ++EDVDI G
Sbjct: 375 LKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDICG----- 429
Query: 473 VTDIPPVAIEKDAANRNSKC 492
+ P+ ++KDA RNSKC
Sbjct: 430 --NASPIMLDKDAQIRNSKC 447
>gi|413921384|gb|AFW61316.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 558
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 203/544 (37%), Positives = 283/544 (52%), Gaps = 112/544 (20%)
Query: 23 MMGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAP-KRKCISL 81
MMGK+ +SKGH GFVPDYRH VE M E + GS RVD S C P KRKC+S+
Sbjct: 1 MMGKTHMFSKGHPLGFVPDYRHRVEAMGEFKRLGSPVRVD-----SGSYCPPPKRKCVSV 55
Query: 82 NID------GYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVV 135
N + G+ VP +V +L M+ +++ +E++L +L QV+ LQ ++ S NV
Sbjct: 56 NSEERECASGFSLTRVPREVFSLPSMTALDKKDVEMRLHHELAQVKDLQIRLFSGGHNV- 114
Query: 136 LSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKG----KKRAPNGR--NGPQTKKGNSGRL 189
S+ G +V AP KK+A R N QT +G +
Sbjct: 115 -------------------GSMNGATVASAPGSDMLPKKKAEKLRRSNSVQTDRGAPPPM 155
Query: 190 EPKKPAGAASSSNAML-MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+SS N KQC NLL LMSH + F PVD++KLNIPDYF ++K PMD
Sbjct: 156 ATAVAPPVSSSINYTSSFKQCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMD 215
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
LGTI+ ++ +G YS P FAADVRLTFSNAM YNP NDVH+MA TL K FE RWK IEK
Sbjct: 216 LGTIQKRMKAGMYSTPPEFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEK 275
Query: 309 KLPVTVDMTAVPSRADDMIETETRMGMPPMKK-------KKVS----------------- 344
KLP + P + D+ + + PP++K K+VS
Sbjct: 276 KLPKPDEK---PPQPDE--KPPQPVEKPPVRKPTKKNSTKRVSIEKEDLTKKKPSKKSVP 330
Query: 345 -----------------PKETK----IKAEPVRRVMTNEEKRILSTE----LEALLEE-- 377
PK+ K ++ P+ + KRI+++E L A L+
Sbjct: 331 KQYIFRGEDSADSPVLQPKKRKTSPLVQDAPLVGDIVPTRKRIMTSEQKYDLSARLQSYG 390
Query: 378 --LPESIIDFLKEHS-AGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPG- 433
+P+ +++ ++ H+ + E+ELE+D+DAL DDTLF L +LLDDY + NP
Sbjct: 391 AFIPDHVVELIRSHADYCDANEEELELDMDALGDDTLFELLRLLDDY------DRVNPSR 444
Query: 434 ------PCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAAN 487
P E++ ++ L N+S+ + N+L DEDVDI G NDPPV PP+ +E + A+
Sbjct: 445 NLTEQDPHEVKSRSQYELINASVCNEEVNELFDEDVDI-GENDPPVLTFPPLVLEDETAD 503
Query: 488 RNSK 491
R+ K
Sbjct: 504 RSRK 507
>gi|6016737|gb|AAF01563.1|AC009325_33 hypothetical protein [Arabidopsis thaliana]
gi|6091741|gb|AAF03453.1|AC010797_29 hypothetical protein [Arabidopsis thaliana]
Length = 601
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 187/454 (41%), Positives = 245/454 (53%), Gaps = 79/454 (17%)
Query: 35 SSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQ 94
+ GF DY F S G D AS+D + FGVP
Sbjct: 5 NGGFPGDYNR--------NSFDSPGGCDDSPNASKDD---------------ETFGVPRI 41
Query: 95 VLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASL---SSNVVLSPSSDIRSCNDGQKR 151
VL LS +S +ERR L+ +LEQ+R QK V L S V +P+S++ R
Sbjct: 42 VLPLSDLSSSERRKWIHTLRQELEQLRSFQKSVGDLLPISKIVTSTPASNV-------SR 94
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P +S G P GK+ P P EP ++S + MKQCE+
Sbjct: 95 P--KSFGMSRCSTGP-GKRVLPFTATKP----------EP------VTTSTMLRMKQCES 135
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL RLMS Q W+FNTPVDV+KLNIPDYFT+IKHPMDLGT+K K+TSG YS P F+ADV
Sbjct: 136 LLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADV 195
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETET 331
RLTF NAMTYNP N+V+ ADTL K+FEVRWK IEKK T + PS + +
Sbjct: 196 RLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSSGT---KSEPSNLATLAHKDI 252
Query: 332 RMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSA 391
+ P KK+K++ + EP +RVMT+E++ L +L +L E P II+FL++HS+
Sbjct: 253 AIPEPVAKKRKMNAVKRNSLLEPAKRVMTDEDRVKLGRDLGSLT-EFPVQIINFLRDHSS 311
Query: 392 GE--TGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSS 449
E +G+DE+EIDI+ LS D LF LR L D++L E Q+K +N P
Sbjct: 312 KEERSGDDEIEIDINDLSHDALFQLRDLFDEFLRENQKKDSNGEPW-------------- 357
Query: 450 MQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEK 483
++L DEDVDI G + P++ I V EK
Sbjct: 358 ------SELEDEDVDI-GNYEHPISHISTVRTEK 384
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 162/224 (72%), Gaps = 10/224 (4%)
Query: 556 SVNSLDQVELNSQGKPVAIV-ADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAR 614
SV L+Q+E S+GK I ADGH +G SAP E+++ P+K YRAALL+NRFAD ILKA+
Sbjct: 387 SVGGLNQMEDASRGKLSLIEGADGHQDGNSAPKEKELPPEKRYRAALLKNRFADIILKAQ 446
Query: 615 EKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRE 674
E L + EKRDPE L+ E+EELE + ++EKARLQAEAK AEEARRKAEA+ EAKRK E
Sbjct: 447 EITLNQNEKRDPETLQREKEELELQKKKEKARLQAEAKEAEEARRKAEAQ---EAKRKLE 503
Query: 675 LEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFK 734
LEREAARQAL MEK+V+INEN+RF++DLE+L+ +QL + S D L F
Sbjct: 504 LEREAARQALLEMEKSVEINENTRFLKDLELLKTVNTDQLRNLRDVGSE---SDGLAVFG 560
Query: 735 FQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
F GS NPLEQLGL+MK ++D++E L +P +VEEGEID
Sbjct: 561 FGGS-NPLEQLGLFMKHEEDEDE--SDMLAFPDPGNEVEEGEID 601
>gi|297740594|emb|CBI30776.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 294/582 (50%), Gaps = 80/582 (13%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
QC ++L +LM+H GWVFN PVD + LNIPDYF++I PMDLGTIK K+ Y F
Sbjct: 58 QCTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEF 117
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMI 327
AADVRLTF+NAM YNPP N+VH MA L F RWK TVD S D
Sbjct: 118 AADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRWK--------TVDTNWSESSKVDPG 169
Query: 328 ETETRMGMPPMKKKKVSPKETKIKAEPVRRV--MTNEEKRILSTEL-EALLEELPESIID 384
+ + + K ++ K P M+ E+K+ L EL E ++P +
Sbjct: 170 KI-----LSGGRGKTINSSRQKCSTTPSLHANSMSFEDKQKLRKELMEVSRGKMPPYLGG 224
Query: 385 FLKEHSAGETGEDELEIDIDALSDDTLFALRKLLD---DYLLEKQQKQANPGPCEMEVLN 441
FL+ H + +E++ID ++TL LR+++ D EK + C +
Sbjct: 225 FLRRHGMTCQNIETMEVNIDKFDEETLLELRRVMKISCDARTEKVECTKTAENCRTK--- 281
Query: 442 ESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSE 501
+S L KG D + G + + P++++ D+ N SSS S
Sbjct: 282 -----SSGKDLDKGTD--RNNAHACGSGNTKL----PLSLQNDSNN------GSSSDLST 324
Query: 502 SGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLD 561
S D + SS SEP N +N +S + + S+G +V+++D
Sbjct: 325 ERSFVKDYRACSSDASEP---------NCQVKNTISRISKSDPDSDG-------AVSAVD 368
Query: 562 QVELNSQGKPVA-IVADGHHEGESAP-SERQVSPDKLYRAALLRNRFADTILKAREKA-L 618
+ + P+ A EG P + Q+SP K RAA+L++RFADTILKA++K L
Sbjct: 369 DENICTSSHPMTPTTAAAPGEGWITPIFDVQLSPKKALRAAMLKSRFADTILKAQQKTLL 428
Query: 619 EKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELERE 678
+ G K D K++ ++E LE++ EEK RL+A+ +AAE A R +A E+K +RE ERE
Sbjct: 429 DHGNKADRVKMQQKKERLEKKQLEEKGRLEAQVRAAEAASR---MKAETESKLQREKERE 485
Query: 679 AARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGS 738
AAR ALQ M +TV+ N + +++LE L + ++ D + +L +F F
Sbjct: 486 AARVALQKMARTVEFENNVQIVKELEKLSGC----VLTYQYYRQRDS-KVQLRAFNF--- 537
Query: 739 TNPLEQLGLYMKMD---DDDEEEVEPPLTAKEPIKDVEEGEI 777
NPLE+LGLY+K D D+DE+ + +D EEGEI
Sbjct: 538 GNPLERLGLYIKDDFFVDEDEKIILN--------EDGEEGEI 571
>gi|359483574|ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
Length = 588
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 294/582 (50%), Gaps = 80/582 (13%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
QC ++L +LM+H GWVFN PVD + LNIPDYF++I PMDLGTIK K+ Y F
Sbjct: 73 QCTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEF 132
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMI 327
AADVRLTF+NAM YNPP N+VH MA L F RWK TVD S D
Sbjct: 133 AADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRWK--------TVDTNWSESSKVDPG 184
Query: 328 ETETRMGMPPMKKKKVSPKETKIKAEPVRRV--MTNEEKRILSTEL-EALLEELPESIID 384
+ + + K ++ K P M+ E+K+ L EL E ++P +
Sbjct: 185 KI-----LSGGRGKTINSSRQKCSTTPSLHANSMSFEDKQKLRKELMEVSRGKMPPYLGG 239
Query: 385 FLKEHSAGETGEDELEIDIDALSDDTLFALRKLLD---DYLLEKQQKQANPGPCEMEVLN 441
FL+ H + +E++ID ++TL LR+++ D EK + C +
Sbjct: 240 FLRRHGMTCQNIETMEVNIDKFDEETLLELRRVMKISCDARTEKVECTKTAENCRTK--- 296
Query: 442 ESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSE 501
+S L KG D + G + + P++++ D+ N SSS S
Sbjct: 297 -----SSGKDLDKGTD--RNNAHACGSGNTKL----PLSLQNDSNN------GSSSDLST 339
Query: 502 SGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLD 561
S D + SS SEP N +N +S + + S+G +V+++D
Sbjct: 340 ERSFVKDYRACSSDASEP---------NCQVKNTISRISKSDPDSDG-------AVSAVD 383
Query: 562 QVELNSQGKPVA-IVADGHHEGESAP-SERQVSPDKLYRAALLRNRFADTILKAREKA-L 618
+ + P+ A EG P + Q+SP K RAA+L++RFADTILKA++K L
Sbjct: 384 DENICTSSHPMTPTTAAAPGEGWITPIFDVQLSPKKALRAAMLKSRFADTILKAQQKTLL 443
Query: 619 EKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELERE 678
+ G K D K++ ++E LE++ EEK RL+A+ +AAE A R +A E+K +RE ERE
Sbjct: 444 DHGNKADRVKMQQKKERLEKKQLEEKGRLEAQVRAAEAASR---MKAETESKLQREKERE 500
Query: 679 AARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGS 738
AAR ALQ M +TV+ N + +++LE L + ++ D + +L +F F
Sbjct: 501 AARVALQKMARTVEFENNVQIVKELEKLSGC----VLTYQYYRQRDS-KVQLRAFNF--- 552
Query: 739 TNPLEQLGLYMKMD---DDDEEEVEPPLTAKEPIKDVEEGEI 777
NPLE+LGLY+K D D+DE+ + +D EEGEI
Sbjct: 553 GNPLERLGLYIKDDFFVDEDEKIILN--------EDGEEGEI 586
>gi|147826573|emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
Length = 588
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 293/582 (50%), Gaps = 80/582 (13%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
QC ++L LM+H GWVFN PVD + LNIPDYF++I PMDLGTIK K+ Y F
Sbjct: 73 QCTSILKXLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNXYLATEEF 132
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMI 327
AADVRLTF+NAM YNPP N+VH MA L F RWK TVD S D
Sbjct: 133 AADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRWK--------TVDTNWSESSKVDPG 184
Query: 328 ETETRMGMPPMKKKKVSPKETKIKAEPVRRV--MTNEEKRILSTEL-EALLEELPESIID 384
+ + + K ++ K P M+ E+K+ L EL E ++P +
Sbjct: 185 KI-----LSGGRGKTINSSRQKCSTTPSLHANSMSFEDKQKLRKELMEVSRGKMPPYLGG 239
Query: 385 FLKEHSAGETGEDELEIDIDALSDDTLFALRKLLD---DYLLEKQQKQANPGPCEMEVLN 441
FL+ H + +E++ID ++TL LR+++ D EK + C +
Sbjct: 240 FLRRHGMTCQNIETMEVNIDKFDEETLLELRRVMKISCDARTEKVECTKTAENCRTK--- 296
Query: 442 ESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNSKCSSSSSSSSE 501
+S L KG D + G + + P++++ D+ N SSS S
Sbjct: 297 -----SSGKDLDKGTD--RNNAHACGSGNTKL----PLSLQNDSNN------GSSSDLST 339
Query: 502 SGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVPDIGNSSVNSLD 561
S D + SS SEP N +N +S + + S+G +V+++D
Sbjct: 340 ERSFVKDYRACSSDASEP---------NCQVKNTISRISKSDPDSDG-------AVSAVD 383
Query: 562 QVELNSQGKPVA-IVADGHHEGESAP-SERQVSPDKLYRAALLRNRFADTILKAREKA-L 618
+ + P+ A EG P + Q+SP K RAA+L++RFADTILKA++K L
Sbjct: 384 DENICTSSHPMTPTTAAAPGEGWITPIFDVQLSPKKALRAAMLKSRFADTILKAQQKTLL 443
Query: 619 EKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELERE 678
+ G K D K++ ++E LE++ EEK RL+A+ +AAE A R +A E+K +RE ERE
Sbjct: 444 DHGNKADRVKMQQKKERLEKKQLEEKGRLEAQVRAAEAASR---MKAETESKLQREKERE 500
Query: 679 AARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGS 738
AAR ALQ M +TV+ N + +++LE L + ++ D + +L +F F
Sbjct: 501 AARVALQKMARTVEFENNVQIVKELEKLSGC----VLTYQYYRQRDS-KVQLRAFNF--- 552
Query: 739 TNPLEQLGLYMKMD---DDDEEEVEPPLTAKEPIKDVEEGEI 777
NPLE+LGLY+K D D+DE+ + +D EEGEI
Sbjct: 553 GNPLERLGLYIKDDFFVDEDEKIILN--------EDGEEGEI 586
>gi|42407711|dbj|BAD08859.1| putative bromodomain-containing protein [Oryza sativa Japonica
Group]
gi|125602058|gb|EAZ41383.1| hypothetical protein OsJ_25901 [Oryza sativa Japonica Group]
Length = 791
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/308 (46%), Positives = 180/308 (58%), Gaps = 44/308 (14%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEG-FGSSGRVDTEMTASEDSCA-PKRKCISL 81
MGK++K+SKGH GFVPDYRH VET+ ES+G GS R+ S SCA PKRKC L
Sbjct: 1 MGKTQKFSKGHPLGFVPDYRHGVETVGESKGCIGSPERI-----VSGSSCAVPKRKCGIL 55
Query: 82 NI-DGYD--NFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSP 138
DG + F VP V L +MS ++++ LE++L+ +LEQV+ LQ S + L P
Sbjct: 56 KTEDGGELPGFNVPRDVFMLPRMSPSDKKDLEMRLRKELEQVKALQ-------SRLFLRP 108
Query: 139 SSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNS---GRLEPKKPA 195
++ S N G S G V RN + K+ NS GR P P+
Sbjct: 109 AA--VSMNGGAA-----SASGDVVA-----------KRNDAKLKRSNSVQSGRGVP--PS 148
Query: 196 GAA----SSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGT 251
A S++ A KQC NLL L HQ+ F PVDV++LNIPDYF +IK PMDLGT
Sbjct: 149 AATPVVRSANYAEAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGT 208
Query: 252 IKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP 311
I+ K+ +G YS P FAADVRLTF NA+TYNP NDV++M TL+ FE RWK IEKKLP
Sbjct: 209 IEKKLNAGMYSTPWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRWKFIEKKLP 268
Query: 312 VTVDMTAV 319
D +V
Sbjct: 269 SLDDKFSV 276
>gi|125560007|gb|EAZ05455.1| hypothetical protein OsI_27669 [Oryza sativa Indica Group]
Length = 791
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 178/307 (57%), Gaps = 42/307 (13%)
Query: 24 MGKSRKYSKGHSSGFVPDYRHAVETMAESEGFGSSGRVDTEMTASEDSCA-PKRKCISLN 82
MGK++K+SKGH GFVPDYRH VET+ ES+G S E S SCA PKRKC L
Sbjct: 1 MGKTQKFSKGHPLGFVPDYRHGVETVGESKGCIGS----PEPIVSGSSCAVPKRKCGILK 56
Query: 83 I-DGYD--NFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPS 139
DG + F VP V L +MS ++++ LE++L+ +LEQV+ LQ ++ S + V
Sbjct: 57 TEDGGELPGFNVPRDVFMLPRMSPSDKKDLEMRLRKELEQVKALQSRLFSRPAAV----- 111
Query: 140 SDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNS---GRLEPKKPAG 196
S N G + S G V RN + K+ NS GR P P+
Sbjct: 112 ----SMNGG-----VASASGDVVA-----------KRNDAKLKRSNSVQSGRGVP--PSA 149
Query: 197 AA----SSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
A S++ A KQC NLL L HQ+ F PVDV++LNIPDYF +IK PMDLGTI
Sbjct: 150 ATPVVRSANYAEAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTI 209
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
+ K+ +G YS P FAADVRLTF NA+TYNP NDV++M TL+ FE RWK IEKKLP
Sbjct: 210 EKKLNAGMYSTPWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRWKFIEKKLPS 269
Query: 313 TVDMTAV 319
D +V
Sbjct: 270 LDDKFSV 276
>gi|242080419|ref|XP_002444978.1| hypothetical protein SORBIDRAFT_07g002270 [Sorghum bicolor]
gi|241941328|gb|EES14473.1| hypothetical protein SORBIDRAFT_07g002270 [Sorghum bicolor]
Length = 320
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 192/355 (54%), Positives = 243/355 (68%), Gaps = 43/355 (12%)
Query: 431 NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANRNS 490
NP C E++N S ++ +GN+L+DEDVDI G NDPPV+ +PPV +E + A+R+S
Sbjct: 2 NPSVCNNELINPSVCND------EGNELIDEDVDI-GENDPPVSTLPPVVLEDETADRSS 54
Query: 491 KCSSSSSSSSESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKKSEGVP 550
K S+SSSSSS S SSSSDSDS SSSGS+ AKA + +E ++ LD++K
Sbjct: 55 KHSTSSSSSSGSESSSSDSDSSSSSGSD-TDAKAPQQNSGPKEKILPVDGLDKEKD---- 109
Query: 551 DIGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPD---KLYRAALLRNRFA 607
S+N+L+ E ++ P+++ ADG EG + SE+QVSPD K RAALLR+RFA
Sbjct: 110 -----SLNTLNLPEQSTN--PISVSADG--EGGNV-SEKQVSPDNPDKQIRAALLRSRFA 159
Query: 608 DTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRK----AEA 663
DTILKAREKAL++ K+DPEKLR EREELER REE+ARLQAEAKAAE+ R++ A A
Sbjct: 160 DTILKAREKALDQTTKKDPEKLRREREELERVQREERARLQAEAKAAEDVRKRAEAAAAA 219
Query: 664 EAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASP 723
EAAAEAKR+RELEREAAR+ALQ MEKTVDINE S F++DLEML EQ+P+ E SP
Sbjct: 220 EAAAEAKRQRELEREAARKALQEMEKTVDINEGSHFLKDLEMLGSVTGEQIPNLVGETSP 279
Query: 724 DHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
F+ +N LE+LGLYMK D+DDE+ EP+ DVEEGEID
Sbjct: 280 ----------GFEMGSNTLEKLGLYMKNDEDDEDAD----FTDEPVVDVEEGEID 320
>gi|449530837|ref|XP_004172398.1| PREDICTED: transcription factor GTE8-like, partial [Cucumis
sativus]
Length = 219
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 170/209 (81%), Gaps = 3/209 (1%)
Query: 570 KPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKL 629
KP + +D + +G SE+ VSP++LYRAALL+NRFADTIL+A+EK + +G+K DPEKL
Sbjct: 14 KPSSTESDCNQDGNYTASEKPVSPERLYRAALLKNRFADTILRAKEKTMTQGDKGDPEKL 73
Query: 630 RIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEK 689
R EREELE R+EKARLQAEAKAA++A+R+AEAEAAAEAKRKREL+REAARQAL +EK
Sbjct: 74 RREREELELEQRKEKARLQAEAKAAQDAQRRAEAEAAAEAKRKRELDREAARQALLQIEK 133
Query: 690 TVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYM 749
TV I+ENS+F+EDLEMLR A EQLPS E SPDH QD LGSFKF GS NPLEQLGL++
Sbjct: 134 TVIIDENSQFLEDLEMLRAAPAEQLPSSGDETSPDHSQDGLGSFKFVGS-NPLEQLGLFI 192
Query: 750 KMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
K D++D EE+EP + IKDVEEGEID
Sbjct: 193 KADEED-EEIEPNFVSN-SIKDVEEGEID 219
>gi|326502374|dbj|BAJ95250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/266 (46%), Positives = 154/266 (57%), Gaps = 36/266 (13%)
Query: 47 ETMAESEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTER 106
ET+ ES GS RVD SEDS APKRKCISLN DG+D V ++ SK+S +ER
Sbjct: 31 ETVGES---GSPVRVD-----SEDSSAPKRKCISLNSDGFD---VKREIFVPSKLSSSER 79
Query: 107 RSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAP 166
R L + + +L+ VR L K+ L+ + P S + P S P
Sbjct: 80 RYLRKRFRAELDSVRYLLKRPEFLA----IMPVS---------RAPGFSSSAAP------ 120
Query: 167 KGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWV 224
RA + G +G GR P KP S+ A ++KQCE +L +LM+ +F +
Sbjct: 121 ----RAKKVQRGSHVLRGAKGRFLPTKPRPETSTVLPEATILKQCEAILKKLMTQKFSHI 176
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
FN PVDV KLNIPDY +IKHPMDLGTIK K+ SG Y+ P FAADVRLTF+NA+TYNP
Sbjct: 177 FNVPVDVEKLNIPDYNEIIKHPMDLGTIKKKLDSGSYTSPSDFAADVRLTFNNAITYNPR 236
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKKL 310
+ VH MA L K FE RWK +EKKL
Sbjct: 237 GHAVHDMAIQLNKMFESRWKTVEKKL 262
>gi|356545057|ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 874
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 153/275 (55%), Gaps = 33/275 (12%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
K C +LL +LM H+ GWVFN PVDV L + DYFT+I HPMDLGT+K ++ Y P
Sbjct: 531 FFKSCSSLLEKLMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDLGTVKSRLNKNWYKSP 590
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
FA DVRLTF NAMTYNPP DVHIMA+ L K FE RW IE
Sbjct: 591 KEFAEDVRLTFRNAMTYNPPGQDVHIMAEQLSKIFEDRWAIIESDYNREMRYGFDYGAVA 650
Query: 311 --------------PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
P +DM + +R++ M +T M + P + +PK+ K K +P +
Sbjct: 651 PALSPLSRRVSAFTPPPLDMRRILNRSESMTQTPRLMSITP-SSRTPAPKKPKAK-DPHK 708
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALR 415
R MT EEK+ LST L++L E ++I+ +K+ +SA +DE+E+DID++ +TL+ L
Sbjct: 709 RDMTFEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWELD 768
Query: 416 KLLDDY--LLEKQQKQANPGPCEMEVLNESGLSNS 448
+ + +Y L K +++A E L ++ + S
Sbjct: 769 RFVTNYKKSLSKNKRKAELAQARAEALQQNAIQKS 803
>gi|356515098|ref|XP_003526238.1| PREDICTED: uncharacterized protein LOC100780669 [Glycine max]
Length = 971
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 140/246 (56%), Gaps = 31/246 (12%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
K C +LL +LM H+ GWVFN+PVDV L + DYFT+I HPMDLGT+K ++ Y P
Sbjct: 628 FFKSCSSLLEKLMRHKHGWVFNSPVDVETLGLHDYFTIITHPMDLGTVKTRLNKNWYKSP 687
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
FA DVRLTF NAMTYNP DVHIMA+ L K FE RW IE
Sbjct: 688 KEFAEDVRLTFRNAMTYNPQGQDVHIMAELLSKIFEDRWAIIESDYNREMRYGFDYRAAP 747
Query: 311 --------------PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
P +DM + R+D M +T M + P + +PK+ K K +P +
Sbjct: 748 PAPSPLSRRVSAFTPPPLDMRRILDRSDSMTQTPRLMSITP-SSRTPAPKKPKAK-DPHK 805
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALR 415
R MT EEK+ LST L++L E ++I+ +K+ +SA +DE+E+DID++ +TL+ L
Sbjct: 806 RDMTFEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWELD 865
Query: 416 KLLDDY 421
+ + +Y
Sbjct: 866 RFVTNY 871
>gi|302143389|emb|CBI21950.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 199/386 (51%), Gaps = 59/386 (15%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS----------LSSNVVLSPSSDIRSC 145
+ L+ S+ E R L KL+T+L+ VR L KK+ + + +V SS++ S
Sbjct: 146 INLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGSEGGVVDDSVAKRVSSEVASA 205
Query: 146 ND-GQKRPLLE--------SVGGPSVV----LAPK------------GKKRAPNGRNGPQ 180
Q RPL + S GG VV PK GK++ P N
Sbjct: 206 KSLSQSRPLHQLSISVIENSQGGSDVVEKEKRTPKANQFYRNSEFLLGKEKFPTESNKKT 265
Query: 181 TKKGN-SGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDY 239
G G +EP G S+ N K C LL RLM H+ GWVFN+PVDV L + DY
Sbjct: 266 KLNGKKHGGVEP----GYGSAMNKCF-KNCGALLERLMKHKHGWVFNSPVDVKGLGLHDY 320
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F++I PMDLGT+K ++ Y P FA DVRLTF NAMTYNP DVH+MA+ L K F
Sbjct: 321 FSIITDPMDLGTVKSRLNKNWYKSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIF 380
Query: 300 EVRWKAIE-KKLPVTVDMTAVPS----RADDMIETETRMGMPPMKKKKVSP-------KE 347
E +W IE +KLP M +PS R D E+ T P +K +P K+
Sbjct: 381 EDKWAVIEAEKLPAPPPM--LPSHEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPSLKK 438
Query: 348 TKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDAL 406
K K +P +R MT EEK+ LST L+ L E ++I+ +K +SA DE+E+DID++
Sbjct: 439 PKAK-DPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSV 497
Query: 407 SDDTLFALRKLLDDYL--LEKQQKQA 430
+TL+ L + + +Y L K +++A
Sbjct: 498 DAETLWELDRYVTNYKKSLSKNKRKA 523
>gi|356546972|ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 640
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 147/253 (58%), Gaps = 29/253 (11%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L+K C +LL +LM H+ GWVF+TPVDV L + DYF++I HPMDLGT+K ++ Y P
Sbjct: 301 LLKSCSSLLEKLMKHKHGWVFDTPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYRSP 360
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
FA DVRLTF NAMTYNP DVHIMA+ L FE RW IE
Sbjct: 361 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLSNIFEERWAIIESNYNREMTYGLDYGAPS 420
Query: 311 ----------PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMT 360
P +DM + R++ M + MG+ P + +PK+ K K +P +R MT
Sbjct: 421 PVSRKAPPFRPPPIDMRRILDRSESMTQPPKIMGITPSSRTP-APKKPKAK-DPHKRDMT 478
Query: 361 NEEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALRKLLD 419
EEK+ LST L++L E ++I+ +K+ +SA +DE+E+DID++ +TL+ L + +
Sbjct: 479 YEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEVDIDSVDTETLWELDRFVT 538
Query: 420 DYL--LEKQQKQA 430
+Y L K +++A
Sbjct: 539 NYKKSLSKNKRKA 551
>gi|356542179|ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781720 [Glycine max]
Length = 901
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 145/253 (57%), Gaps = 29/253 (11%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L+K C LL +LM H+ GWVFN PVDV L + DYF++I HPMDLGT+K ++ Y P
Sbjct: 562 LLKSCSALLEKLMKHKHGWVFNAPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYKSP 621
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
FA DVRLTF NAMTYNP DVHIMA+ L FE RW IE
Sbjct: 622 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLNIFEERWAIIESNYYREIRYGLDYGAPS 681
Query: 311 ----------PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMT 360
P +DM + R++ M + MG+ P + +PK+ K K +P +R MT
Sbjct: 682 PVSRKAPPFRPPPIDMRRILDRSESMTQPPKIMGITPSSRTP-APKKPKAK-DPHKRDMT 739
Query: 361 NEEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALRKLLD 419
EEK+ LST L++L E ++I+ +K+ +SA +DE+E+DID++ +TL+ L + +
Sbjct: 740 YEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEVDIDSVDTETLWELDRFVT 799
Query: 420 DYL--LEKQQKQA 430
+Y L K +++A
Sbjct: 800 NYKKSLSKNKRKA 812
>gi|302142921|emb|CBI20216.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 186/363 (51%), Gaps = 65/363 (17%)
Query: 97 TLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLES 156
++S S+ E+R L KL +L+QVR L KK+ + + S + S NDG R
Sbjct: 52 SISMRSKVEKRDLRRKLLGELDQVRSLAKKLDTNDGQLSGYAHSQV-SGNDGLDR----- 105
Query: 157 VGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRL 216
GG ++ + ++ G+ G + A K C NLL +L
Sbjct: 106 -GGGALRV---------------NSEVGSVGYV-------------AQAFKNCSNLLAKL 136
Query: 217 MSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFS 276
M H+ GWVFN PVDV L + DY+++IKHPMD GT+K +++ Y P FA DVRLT
Sbjct: 137 MKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRLSKNWYKSPREFAEDVRLTLQ 196
Query: 277 NAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDM-----TAVPS---------- 321
NAMTYNP DVH MA+ L K FE +W AIE L M T P+
Sbjct: 197 NAMTYNPKGQDVHCMAEELLKIFEEKWAAIEADLYWRFGMGHDAGTPTPTSRKAPYLHHH 256
Query: 322 RADDM--IETETRMGMP---PMKKKKVS------PKETKIKAEPVRRVMTNEEKRILSTE 370
+ +M ++ M MP +K + PK+ K K +P +R MT EEK+ LS+
Sbjct: 257 HSPEMRTVDRSGSMAMPIDSNLKPGNFAHMRMPVPKKPKAK-DPHKRDMTYEEKQKLSSN 315
Query: 371 LEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALRKLLDDYL--LEKQQ 427
L++L E + I+ +K+ +SA +DE+E+DID++ +TL+ L + + +Y L K +
Sbjct: 316 LQSLPSEKLDHIVQIIKKRNSAVSQQDDEIEVDIDSVDAETLWELDRYVTNYKKSLSKNK 375
Query: 428 KQA 430
++A
Sbjct: 376 RKA 378
>gi|414886313|tpg|DAA62327.1| TPA: hypothetical protein ZEAMMB73_683634 [Zea mays]
Length = 562
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 144/196 (73%), Gaps = 21/196 (10%)
Query: 587 SERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKAR 646
SE+QVSPDK RAALLR+RFADTILKAREKAL++ +DPEKLR EREELER REE+AR
Sbjct: 384 SEKQVSPDKQIRAALLRSRFADTILKAREKALDQ---KDPEKLRREREELERVQREERAR 440
Query: 647 LQAEAKAAEEARRKAEAEAAAEA----KRKRELEREAARQALQMMEKTVDINENSRFMED 702
LQAEAKAAE+ R++ EA AAAEA KR+RELEREAAR+ALQ MEKTVDINE S F++D
Sbjct: 441 LQAEAKAAEDVRKRVEAAAAAEAAAEAKRQRELEREAARKALQEMEKTVDINEGSHFLKD 500
Query: 703 LEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPP 762
LEML EQ+P+ E SP FQ +N LE+LGLYMK D+DDE+
Sbjct: 501 LEMLGSVTGEQIPNLVGETSPG----------FQMGSNTLEKLGLYMKNDEDDEDGD--- 547
Query: 763 LTAKEPIKDVEEGEID 778
EP+ DVEEGEID
Sbjct: 548 -FTDEPVSDVEEGEID 562
>gi|225446551|ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 654
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 195/412 (47%), Gaps = 89/412 (21%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS----------LSSNVVLSPSSDIRSC 145
+ L+ S+ E R L KL+T+L+ VR L KK+ + + +V SS++ S
Sbjct: 146 INLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGSEGGVVDDSVAKRVSSEVASV 205
Query: 146 NDG----QKRPLLESVGGP----------------SVVLAPKG-------KKRAPN---- 174
N+ Q RPL +S P SV+ +G +KR P
Sbjct: 206 NESRPLQQSRPLQQSRSFPQAKSLSQSRPLHQLSISVIENSQGGSDVVEKEKRTPKANQF 265
Query: 175 --------GRNGPQTKKGNSGRLEPKKPAGAASSSNAML---MKQCENLLTRLMSHQFGW 223
G+ T+ +L KK G + + K C LL RLM H+ GW
Sbjct: 266 YRNSEFLLGKEKFPTESNKKTKLNGKKHGGVEPGYGSAMNKCFKNCGALLERLMKHKHGW 325
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNP 283
VFN+PVDV L + DYF++I PMDLGT+K ++ Y P FA DVRLTF NAMTYNP
Sbjct: 326 VFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPREFAEDVRLTFHNAMTYNP 385
Query: 284 PQNDVHIMADTLRKYFEVRWKAIE----------------------KKLPVTVDMTAVPS 321
DVH+MA+ L K FE +W IE +KLP M +PS
Sbjct: 386 KGQDVHVMAEVLSKIFEDKWAVIEAEYSRELRLGYEYEMGLPTPTSRKLPAPPPM--LPS 443
Query: 322 ----RADDMIETETRMGMPPMKKKKVSP-------KETKIKAEPVRRVMTNEEKRILSTE 370
R D E+ T P +K +P K+ K K +P +R MT EEK+ LST
Sbjct: 444 HEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPSLKKPKAK-DPNKRDMTFEEKQKLSTN 502
Query: 371 LEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALRKLLDDY 421
L+ L E ++I+ +K +SA DE+E+DID++ +TL+ L + + +Y
Sbjct: 503 LQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELDRYVTNY 554
>gi|225461616|ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 597
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 200/406 (49%), Gaps = 75/406 (18%)
Query: 93 LQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKV------------ASLSSN------- 133
++ ++S S+ E+R L KL +L+QVR L KK+ + +S N
Sbjct: 110 IRFRSISMRSKVEKRDLRRKLLGELDQVRSLAKKLDTNDGQLSGYAHSQVSGNDGLDRGG 169
Query: 134 VVLSPSSDIRSCNDGQKRP---LLESVGGPSVVLA---------PKGKKRAPN-----GR 176
L +S++ S RP L SV G S + PK K N G+
Sbjct: 170 GALRVNSEVGSVGVQDSRPFRGLSVSVMGNSHGIGEFVEKEKRTPKANKYYQNPDFVLGK 229
Query: 177 NG---PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMK 233
+ P++ K +PK A K C NLL +LM H+ GWVFN PVDV
Sbjct: 230 DKLPPPESNK------KPKSNGVGIDKYVAQAFKNCSNLLAKLMKHKHGWVFNNPVDVKG 283
Query: 234 LNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMAD 293
L + DY+++IKHPMD GT+K +++ Y P FA DVRLT NAMTYNP DVH MA+
Sbjct: 284 LGLHDYYSIIKHPMDFGTVKSRLSKNWYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAE 343
Query: 294 TLRKYFEVRWKAIEKKLPVTVDM-----TAVPS----------RADDM--IETETRMGMP 336
L K FE +W AIE L M T P+ + +M ++ M MP
Sbjct: 344 ELLKIFEEKWAAIEADLYWRFGMGHDAGTPTPTSRKAPYLHHHHSPEMRTVDRSGSMAMP 403
Query: 337 ---PMKKKKVS------PKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLK 387
+K + PK+ K K +P +R MT EEK+ LS+ L++L E + I+ +K
Sbjct: 404 IDSNLKPGNFAHMRMPVPKKPKAK-DPHKRDMTYEEKQKLSSNLQSLPSEKLDHIVQIIK 462
Query: 388 E-HSAGETGEDELEIDIDALSDDTLFALRKLLDDYL--LEKQQKQA 430
+ +SA +DE+E+DID++ +TL+ L + + +Y L K +++A
Sbjct: 463 KRNSAVSQQDDEIEVDIDSVDAETLWELDRYVTNYKKSLSKNKRKA 508
>gi|147820894|emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
Length = 660
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 195/412 (47%), Gaps = 89/412 (21%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS----------LSSNVVLSPSSDIRSC 145
+ L+ S+ E R L KL+T+L+ VR L KK+ + + +V SS++ S
Sbjct: 146 INLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGSEGGVVDDSVAKRVSSEVASV 205
Query: 146 NDG----QKRPLLESVGGP----------------SVVLAPKG-------KKRAPN---- 174
N+ Q RPL +S P SV+ +G +KR P
Sbjct: 206 NESRPLQQSRPLQQSRSFPQAKSLSQSRPLHQLSISVIENSQGGSDVVEKEKRTPKANQF 265
Query: 175 --------GRNGPQTKKGNSGRLEPKKPAGAASSSNAML---MKQCENLLTRLMSHQFGW 223
G+ T+ +L KK G + + K C LL RLM H+ GW
Sbjct: 266 YRNSEFLLGKEKFPTESNKKTKLNGKKHGGVEPGYGSAMNKCFKNCGALLERLMKHKHGW 325
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNP 283
VFN+PVDV L + DYF++I PMDLGT+K ++ Y P FA DVRLTF NAMTYNP
Sbjct: 326 VFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPREFAEDVRLTFHNAMTYNP 385
Query: 284 PQNDVHIMADTLRKYFEVRWKAIE----------------------KKLPVTVDMTAVPS 321
DVH+MA+ L K FE +W IE +KLP M +PS
Sbjct: 386 KGQDVHVMAEVLSKIFEDKWAVIEAEYSRELRLGYEYEMGLPTPTSRKLPAPPPM--LPS 443
Query: 322 ----RADDMIETETRMGMPPMKKKKVSP-------KETKIKAEPVRRVMTNEEKRILSTE 370
R D E+ T P +K +P K+ K K +P +R MT EEK+ LST
Sbjct: 444 HEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPSLKKPKAK-DPNKRDMTFEEKQKLSTN 502
Query: 371 LEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALRKLLDDY 421
L+ L E ++I+ +K +SA DE+E+DID++ +TL+ L + + +Y
Sbjct: 503 LQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELDRYVTNY 554
>gi|413947734|gb|AFW80383.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
gi|413947735|gb|AFW80384.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
Length = 490
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 161/328 (49%), Gaps = 53/328 (16%)
Query: 119 QVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNG 178
QVR K+++SL + +PSS + S D G K K R P G
Sbjct: 64 QVRAAAKRLSSLPAP---APSSAL-SATDPSTPLPPHPPGS-------KHKSRKPGGAPY 112
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
PQ P A A A + K C LL RLM H+ WVFNTPVD L + D
Sbjct: 113 PQ----------PHLSAEARRKLYAPVFKTCSALLQRLMKHKHSWVFNTPVDASALGLHD 162
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y T+I PMDLGT+K K+ +GQY P FA DVRLTF NAMTYNP DVH MA+ L
Sbjct: 163 YHTIITKPMDLGTVKSKLAAGQYRSPREFAGDVRLTFRNAMTYNPKGQDVHFMAEQLLNM 222
Query: 299 FEVRWKAIEKKL-----------------PVTVDMTAVPSRADDMIET-------ETRMG 334
FE +W IE +L P +D + R+D + +T G
Sbjct: 223 FEEKWLEIEAELAQLSPQPPTPSSAAPRKPKEIDNSRALERSDSTVHAAGMEATPKTHNG 282
Query: 335 MPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE-HSAGE 393
PP+ KK PK EP +R MT EK+ LS L+ L E ++++ +K+ +S+
Sbjct: 283 RPPVSKK---PKAR----EPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNSSLN 335
Query: 394 TGEDELEIDIDALSDDTLFALRKLLDDY 421
+DE+E+DID+ +TL+ L + + +Y
Sbjct: 336 QHDDEIEVDIDSFDVETLWELDRFVTNY 363
>gi|255568313|ref|XP_002525131.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535590|gb|EEF37258.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 742
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 140/247 (56%), Gaps = 31/247 (12%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K C LL +LM H++GWVF +PVDV L + DYFT+IKHPMDLGT+K ++ Y P
Sbjct: 399 IFKNCSALLEKLMKHKYGWVFKSPVDVKGLGLHDYFTIIKHPMDLGTVKTRLNKNWYKSP 458
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
FA DVRLTF NAM YNP DVH+MA+ L K FE RW I+ +
Sbjct: 459 EEFAEDVRLTFHNAMRYNPKGQDVHVMAEILLKLFEDRWVVIKSEFDREMRFVVGCGIGI 518
Query: 311 -----------PVTVDMTAVPSRADDM----IETETRMGMPPMKKKKVSPKETKIKAEPV 355
P +DM + R+D M I+ ++ + +PK+ K K +P
Sbjct: 519 PTPTSRKAPLPPPPLDMRRILDRSDSMRYQPIDPRSKPISTTPSGRTPAPKKPKAK-DPH 577
Query: 356 RRVMTNEEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFAL 414
+R MT +EK+ LST L++L E ++I+ +K+ +S+ +DE+E+DID++ +TL+ L
Sbjct: 578 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLSQHDDEIEVDIDSVDAETLWEL 637
Query: 415 RKLLDDY 421
+ + +Y
Sbjct: 638 DRFVTNY 644
>gi|168003377|ref|XP_001754389.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694491|gb|EDQ80839.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 694
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 156/279 (55%), Gaps = 16/279 (5%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++KQC LL +LM+H+ GWVFN PVD KL + DY ++IK PMDLGTIK K+ QY+ P
Sbjct: 251 MLKQCMTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHLKQYASP 310
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTA----VP 320
L F D+RLTFSNAMTYNP +DV++MA+ L+ FE WK + +K+ +
Sbjct: 311 LEFGEDIRLTFSNAMTYNPVGHDVYVMAELLKNMFEEWWKNMGRKVEEERRRCGKEEEML 370
Query: 321 SRADDMIE--TETRMG---MPPMKKKKVSPK---ETKIKAEPV-RRVMTNEEKRILSTEL 371
+ +D +E E R G + + + K S + + K + E V +R MT EEKR LS L
Sbjct: 371 ANDEDSVEESGEVRRGERDVVSLTRGKASSRMGSQPKPRPEEVGKRAMTFEEKRKLSVNL 430
Query: 372 EALLEELPESIIDFLKEHS--AGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQ 429
E L + E I+ +K+ + G+ EDE+E+DID+ +DTL+ L + + +Y+ + ++
Sbjct: 431 ERLPGDKLERIVQIIKKRNPDLGQN-EDEIEVDIDSFDNDTLWELDRFVTNYMKSRGKRA 489
Query: 430 ANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGG 468
+ + + G+ + G + +V G
Sbjct: 490 KSKAQAQYGDVEVGGMWGRGFMVVNGGGCWASGLMVVAG 528
>gi|449465695|ref|XP_004150563.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 629
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 147/259 (56%), Gaps = 36/259 (13%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ C +LL +LM H+ GWVFNTPVDV L + DYF++I+HPMDLGT+K ++ Y P
Sbjct: 301 IFNACVSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRLNKNWYKSP 360
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
FA DVRLTF NAMTYNP DVHIMA+ L K FE RW IE
Sbjct: 361 KEFAEDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIESNYYQEMRLGMEYGAPL 420
Query: 311 -----------PVTVDMTAVPSRADDMI---ETETR-MGMPPMKKKKVSPKETKIKAEPV 355
PV +DM + R+D +I ++ T+ M + P + +P K KA+ V
Sbjct: 421 PSSNSVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPSAR---TPSLKKPKAKDV 477
Query: 356 -RRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFA 413
+R MT EK+ LST L+ L E ++I+ +K+ + + DE+E+DID++ +TL+
Sbjct: 478 FKRDMTYNEKKKLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEIEVDIDSVDTETLWE 537
Query: 414 LRKLLDDYL--LEKQQKQA 430
L +L+ +Y L K +++A
Sbjct: 538 LDRLVMNYRKSLSKNKRKA 556
>gi|449526541|ref|XP_004170272.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE4-like
[Cucumis sativus]
Length = 629
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 147/259 (56%), Gaps = 36/259 (13%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ C +LL +LM H+ GWVFNTPVDV L + DYF++I+HPMDLGT+K ++ Y P
Sbjct: 301 IFNACVSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRLNKNWYKSP 360
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
FA DVRLTF NAMTYNP DVHIMA+ L K FE RW IE
Sbjct: 361 KEFAEDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIESNYYQEMRLGMEYGGPL 420
Query: 311 -----------PVTVDMTAVPSRADDMI---ETETR-MGMPPMKKKKVSPKETKIKAEPV 355
PV +DM + R+D +I ++ T+ M + P + +P K KA+ V
Sbjct: 421 PSSNSVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPSAR---TPSLKKPKAKDV 477
Query: 356 -RRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFA 413
+R MT EK+ LST L+ L E ++I+ +K+ + + DE+E+DID++ +TL+
Sbjct: 478 FKRDMTYNEKKKLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEIEVDIDSVDTETLWE 537
Query: 414 LRKLLDDYL--LEKQQKQA 430
L +L+ +Y L K +++A
Sbjct: 538 LDRLVMNYRKSLSKNKRKA 556
>gi|449459556|ref|XP_004147512.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
gi|449511376|ref|XP_004163939.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
Length = 533
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 232/496 (46%), Gaps = 110/496 (22%)
Query: 50 AESEGFGSSGRVDTEMTASEDSCA---PKRKCISLNIDGYDNFGVPLQVLTLSKMSQTER 106
E GF +AS+D+ + +R ++ Y +F V S S+ E
Sbjct: 48 GEMNGFQMDDSPAVTQSASDDASSINHHRRLSNGVDFSQYVSFNV-------SSCSRKEL 100
Query: 107 RSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIR-SCNDGQKRPLLESVGGPSVVLA 165
L+ +L ++LEQ+R L+ ++ S + P + S G KRPL
Sbjct: 101 IELKTRLISELEQIRQLKSRINS--GELHSRPKHQKKFSKTLGTKRPL------------ 146
Query: 166 PKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVF 225
P NG + K+ NS N L+K C +LT+LM H+ GW+F
Sbjct: 147 -------PTSSNGMELKRSNS--------------DNGNLLKACSQILTKLMKHKHGWIF 185
Query: 226 NTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQ 285
N PVDV+ + + DY+ ++K PMDLG++K K+ Y P FA+DVRLTF NAMTYNP
Sbjct: 186 NKPVDVVGMGLHDYYDIVKRPMDLGSVKVKLGKDAYESPYDFASDVRLTFKNAMTYNPKG 245
Query: 286 NDVHIMADTLRKYFE-------------------------------------VRWKAIEK 308
+DVH MA+ L FE V+ I+K
Sbjct: 246 HDVHAMAEQLLVRFEELFRPVAEALEEEDRRFCGYQEELPASSWNHSEAERTVKKDNIQK 305
Query: 309 KLPVTVDMTAVPSRADDMIETETRMGMP-PMKKKKVSP-KETKIKA-EPVRRVMTNEEKR 365
++ + PS + + ++ + P P++ V P K+ K +A +P +R MT EEK
Sbjct: 306 QVVKKTEPMKAPSSSSNPPMMQSPVKTPSPLRAPPVKPLKQPKPRAKDPNKREMTLEEKH 365
Query: 366 ILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDY--L 422
L L++L E E ++ +K+ + + DE+E+DI+A+ +TL+ L +L+ ++ +
Sbjct: 366 KLGIGLQSLPPEKMEQVVQIIKKRNGHLKQDGDEIELDIEAVDTETLWELDRLVTNWKKM 425
Query: 423 LEKQQKQA------------NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGND 470
+ K ++QA P P ++EV +E+ + + + +EDVDI G++
Sbjct: 426 MSKIKRQALITAASMKPNGVMPTPEKIEVGSET-------KKQRKGEAGEEDVDI--GDE 476
Query: 471 PPVTDIPPVAIEKDAA 486
P ++ PPV IEKDA
Sbjct: 477 MPASNFPPVEIEKDAG 492
>gi|413936534|gb|AFW71085.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 667
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 149/248 (60%), Gaps = 25/248 (10%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYFT+IKHPMDLGTI+ +++ GQY +P
Sbjct: 326 FKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPK 385
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL--------------P 311
FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++ P
Sbjct: 386 EFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPP 445
Query: 312 VTVDMTAVPSRADDM-----IETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D M ++T +R + P + S K+ + K +P +R MT +EKR
Sbjct: 446 PPIDLHFL-ERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAK-DPNKRDMTIDEKR 503
Query: 366 ILSTELEALLEELPESIIDFLKEHSAGET-GEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L E ++++ +K + +DE+E++ID++ +TL+ L + + +Y
Sbjct: 504 KLSENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFVANYKKN 563
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 564 LSKQKRKA 571
>gi|296088086|emb|CBI35445.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 229/485 (47%), Gaps = 101/485 (20%)
Query: 66 TASED-SCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQ 124
+AS+D S +R + N Y F + S+ + L+ +L ++LE+++ L
Sbjct: 76 SASDDASSFNQRSIVEFNRGRYVTFNI-------GSYSRKDLVQLKNRLVSELEKIQNLS 128
Query: 125 KKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKG 184
++ S ++ L D R+ N Q+ P KK A N R P
Sbjct: 129 NRIES--GDLQLRSGGD-RTANKQQR---------------PNNKKIAGNKRPPP----F 166
Query: 185 NSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+SGR PK+ +++ NA LMK C LT+LM H+ WVFN+PVDV+ + + DY +IK
Sbjct: 167 DSGR-GPKR----SAAENASLMKLCGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYHQIIK 221
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
PMDLGT+K KI Y PL FAADVRLTF NA+ YNP +DVH+MA+ L FE +K
Sbjct: 222 RPMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFK 281
Query: 305 AIEKKL----------------------------------------------PVTVDMTA 318
+ KL P+ ++
Sbjct: 282 PVYNKLEEDERDQERIIVGELQGSSWNHIPTPERLKKPSPKPVAKKPERMQVPIPATGSS 341
Query: 319 VPSRADDMIETETRMGMPPMKKKKVSP---KETKIKA-EPVRRVMTNEEKRILSTELEAL 374
P + T + M PP+K P K+ K KA +P +R M+ EEK L L++L
Sbjct: 342 NPPSVQS-VPTPSPMRAPPVKPLATRPSSGKQPKPKAKDPNKREMSLEEKHKLGLGLQSL 400
Query: 375 LEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA- 430
+E + ++ + + + T + DE+E+DI+A+ +TL+ L +L+ ++ ++ K ++QA
Sbjct: 401 PQEKMDQVVQIISKKNGHLTQDGDEIELDIEAVDTETLWELDRLVTNWKKMVSKIKRQAL 460
Query: 431 ----NPGPCE-----MEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAI 481
N E M E L+ + + K + +EDVDI G++ P PPV I
Sbjct: 461 MVNNNTAATEVNRSSMNERTEPSLAPAMAKKPKKGEAGEEDVDI--GDEIPTATFPPVEI 518
Query: 482 EKDAA 486
EKD A
Sbjct: 519 EKDDA 523
>gi|242061170|ref|XP_002451874.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
gi|241931705|gb|EES04850.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
Length = 654
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 148/248 (59%), Gaps = 25/248 (10%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYFT+IKHPMDLGTI+ +++ GQY +P
Sbjct: 361 FKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSHGQYRNPK 420
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV------------- 312
FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++
Sbjct: 421 EFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPP 480
Query: 313 -TVDMTAVPSRADDM-----IETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D M ++T +R + P + S K+ + K +P +R MT +EKR
Sbjct: 481 PPIDLRFL-ERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAK-DPNKRDMTIDEKR 538
Query: 366 ILSTELEALLEELPESIIDFLKEHSAGET-GEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L E ++++ +K + +DE+E++ID++ +TL+ L + + +Y
Sbjct: 539 KLSENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFVANYKKN 598
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 599 LSKQKRKA 606
>gi|413936535|gb|AFW71086.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 671
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 149/248 (60%), Gaps = 25/248 (10%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYFT+IKHPMDLGTI+ +++ GQY +P
Sbjct: 326 FKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPK 385
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL--------------P 311
FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++ P
Sbjct: 386 EFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPP 445
Query: 312 VTVDMTAVPSRADDM-----IETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D M ++T +R + P + S K+ + K +P +R MT +EKR
Sbjct: 446 PPIDLHFL-ERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAK-DPNKRDMTIDEKR 503
Query: 366 ILSTELEALLEELPESIIDFLKEHSAGET-GEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L E ++++ +K + +DE+E++ID++ +TL+ L + + +Y
Sbjct: 504 KLSENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFVANYKKN 563
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 564 LSKQKRKA 571
>gi|413925979|gb|AFW65911.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
gi|413925980|gb|AFW65912.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 665
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 149/248 (60%), Gaps = 25/248 (10%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYFT+IKHPMDLGTI+ +++ GQY +P
Sbjct: 320 FKKSSSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPK 379
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL--------------P 311
FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++ P
Sbjct: 380 EFAEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASCPPLPKKFPP 439
Query: 312 VTVDMTAVPSRADDM-----IETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D M ++T +R + P + S K+ + K +P +R MT +EKR
Sbjct: 440 PPIDLRFL-ERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAK-DPNKRDMTIDEKR 497
Query: 366 ILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L ++++ +K + + +DE+E++ID++ +TL+ L + + +Y
Sbjct: 498 KLSENLQNLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRFVSNYKKN 557
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 558 LSKQKRKA 565
>gi|413948431|gb|AFW81080.1| hypothetical protein ZEAMMB73_211968 [Zea mays]
Length = 269
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 141/195 (72%), Gaps = 21/195 (10%)
Query: 587 SERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKAR 646
SE+QVSPDK RAALLR+RFADTILKAREKAL++ K+DPEKLR EREELER REE+AR
Sbjct: 31 SEKQVSPDKQIRAALLRSRFADTILKAREKALDQTTKKDPEKLRREREELERVQREERAR 90
Query: 647 LQAEAKAAEEARRK----AEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMED 702
LQA+AKAAE+ R++ A EAAAEAKR+RELEREAAR+ALQ MEK VDINE S F++D
Sbjct: 91 LQADAKAAEDVRKRAEAAAADEAAAEAKRQRELEREAARKALQEMEKIVDINEGSHFLKD 150
Query: 703 LEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPP 762
LEML EQ+P+ E SP FQ +N LE+LGLY+K D+D +
Sbjct: 151 LEMLGSVTGEQIPNLVGETSPG----------FQMGSNTLEKLGLYVKNDEDGD------ 194
Query: 763 LTAKEPIKDVEEGEI 777
EP+ DVEEGEI
Sbjct: 195 -FTDEPVADVEEGEI 208
>gi|413925981|gb|AFW65913.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 670
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 149/248 (60%), Gaps = 25/248 (10%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYFT+IKHPMDLGTI+ +++ GQY +P
Sbjct: 320 FKKSSSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPK 379
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL--------------P 311
FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++ P
Sbjct: 380 EFAEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASCPPLPKKFPP 439
Query: 312 VTVDMTAVPSRADDM-----IETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D M ++T +R + P + S K+ + K +P +R MT +EKR
Sbjct: 440 PPIDLRFL-ERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAK-DPNKRDMTIDEKR 497
Query: 366 ILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L ++++ +K + + +DE+E++ID++ +TL+ L + + +Y
Sbjct: 498 KLSENLQNLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRFVSNYKKN 557
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 558 LSKQKRKA 565
>gi|224146489|ref|XP_002326024.1| global transcription factor group [Populus trichocarpa]
gi|222862899|gb|EEF00406.1| global transcription factor group [Populus trichocarpa]
Length = 393
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 171/345 (49%), Gaps = 58/345 (16%)
Query: 98 LSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESV 157
L S+ E+R L KL+++LE VR L KK+ + + K P ES
Sbjct: 5 LLSQSKQEKRELRKKLESELELVRSLVKKIEAKELQL--------------NKFPPAES- 49
Query: 158 GGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLM 217
KK NG KK +G +G + + K C LL +LM
Sbjct: 50 ----------NKKSKLNG------KKQGAGE------SGFGFGTGTKIFKNCSALLDKLM 87
Query: 218 SHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSN 277
H+ GWVFNTPVDV L + DYF +IKHPMDLGT+K ++T Y P FA DVRLTF N
Sbjct: 88 KHKHGWVFNTPVDVKGLGLHDYFIIIKHPMDLGTVKSRLTKNWYKSPEEFAEDVRLTFHN 147
Query: 278 AMTYNPPQNDVHIMADTLRKYFEVRWKAI--------------EKKLPVTVDMTA---VP 320
AM YNP DVH+MA+ L FE +W I E +P A VP
Sbjct: 148 AMKYNPKGQDVHVMAEQLLDIFETKWAVIKSDYDHEMRFSSSYEVGIPTPTSRKAPPFVP 207
Query: 321 SRAD--DMIETETRMGMPPMKKKKVSPKETKIKA-EPVRRVMTNEEKRILSTELEALLEE 377
D +++ M P + +P + A +P +R MT +EK+ LST L++L E
Sbjct: 208 PPLDMWRILDRSESMTYPIIDTPDPNPLPLHLLAKDPNKRDMTYDEKQKLSTNLQSLPSE 267
Query: 378 LPESIIDFLKEHSAGET-GEDELEIDIDALSDDTLFALRKLLDDY 421
++I+ +K+ S+ + +DE+E+DID++ +TL+ L + + +Y
Sbjct: 268 KLDNIVQIIKKRSSALSQHDDEIEVDIDSVDVETLWELDRFVTNY 312
>gi|449444709|ref|XP_004140116.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449516325|ref|XP_004165197.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 667
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 192/399 (48%), Gaps = 77/399 (19%)
Query: 98 LSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDG--------- 148
L S+ E R L KL++DL +R + K++ + + S + + + N+G
Sbjct: 178 LGSKSKQEMRELRRKLESDLATIRDVLKRIEAKQGELSESGTFHV-TTNEGMDKVGGDKQ 236
Query: 149 QKRPLLESVGGP------------SVVLAPKG-------KKRAPNG----RNG------- 178
Q P + SV P SV+ +G +KR P RN
Sbjct: 237 QIHPEVASVRVPREPSRPLNKLSVSVLENSQGVSDYVEKEKRTPKANQFYRNSEFILGKD 296
Query: 179 --PQTKKGNSGRLEPKKPAGA----ASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVM 232
P + ++ KKP G + + + K C +LL +L+ H++GWVF+ PVDV
Sbjct: 297 KLPPAESNKKAKMNIKKPGGGEIAHSFGTGSKFFKSCSSLLEKLIKHKYGWVFDAPVDVQ 356
Query: 233 KLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMA 292
L + DY+T+IKHPMDLGT+K ++ Y P FA DVRLTF NAMTYNP DV++MA
Sbjct: 357 GLGLHDYYTIIKHPMDLGTVKSRLNKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVYVMA 416
Query: 293 DTLRKYFEVRWKAIEKKL--------------------------PVTVDMTAVPSRADDM 326
D L FE RW IE P +DM + R++
Sbjct: 417 DQLLSIFEDRWVIIEADYNREMRFGLDYGAALSTPTSRKARLPPPPPLDMKRILERSEST 476
Query: 327 ---IETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESII 383
++++ R + +PK+ K K +P +R MT EEK+ LS+ L+ L E ++I+
Sbjct: 477 TYRLDSKNRPLSATPSSRTPAPKKPKAK-DPHKRDMTYEEKQKLSSNLQNLPSEKLDAIL 535
Query: 384 DFLKEHSAGETGED-ELEIDIDALSDDTLFALRKLLDDY 421
+K+ ++ +D E+E+DID++ +TL+ L + + +Y
Sbjct: 536 QIIKKRNSNIFQDDEEIEVDIDSVDAETLWELDRFVTNY 574
>gi|413948432|gb|AFW81081.1| hypothetical protein ZEAMMB73_211968 [Zea mays]
Length = 305
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 141/195 (72%), Gaps = 21/195 (10%)
Query: 587 SERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKAR 646
SE+QVSPDK RAALLR+RFADTILKAREKAL++ K+DPEKLR EREELER REE+AR
Sbjct: 31 SEKQVSPDKQIRAALLRSRFADTILKAREKALDQTTKKDPEKLRREREELERVQREERAR 90
Query: 647 LQAEAKAAEEARRK----AEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMED 702
LQA+AKAAE+ R++ A EAAAEAKR+RELEREAAR+ALQ MEK VDINE S F++D
Sbjct: 91 LQADAKAAEDVRKRAEAAAADEAAAEAKRQRELEREAARKALQEMEKIVDINEGSHFLKD 150
Query: 703 LEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPP 762
LEML EQ+P+ E SP FQ +N LE+LGLY+K D+D +
Sbjct: 151 LEMLGSVTGEQIPNLVGETSPG----------FQMGSNTLEKLGLYVKNDEDGD------ 194
Query: 763 LTAKEPIKDVEEGEI 777
EP+ DVEEGEI
Sbjct: 195 -FTDEPVADVEEGEI 208
>gi|10177440|dbj|BAB10736.1| unnamed protein product [Arabidopsis thaliana]
Length = 569
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/228 (60%), Positives = 168/228 (73%), Gaps = 16/228 (7%)
Query: 556 SVNSLDQVELNSQGK-----PVAIVADGHHEGESAPSERQVSPD---KLYRAALLRNRFA 607
S+N LDQ+E K V +V D E+AP ERQ+SPD K YRAA L+NRFA
Sbjct: 22 SLNELDQLEHTVGEKSTTMDAVVLVPDE----ETAPPERQISPDSPDKRYRAAFLKNRFA 77
Query: 608 DTILKAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAA 667
DTI+KAREKA KGEK DPEKLRIEREE E+R REEK RLQAEAKAAEEARRKA+AEAA
Sbjct: 78 DTIMKAREKAFTKGEKGDPEKLRIEREEFEKRLREEKERLQAEAKAAEEARRKAKAEAAE 137
Query: 668 EAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRI--AQDEQLPSFTAEASPDH 725
+A+R+RE EREAARQALQ MEKTV+INE RFMEDL+MLR + +QLP+ SP
Sbjct: 138 KARREREQEREAARQALQKMEKTVEINEGIRFMEDLQMLRATGTEGDQLPTSMEVMSPKF 197
Query: 726 LQDR--LGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKD 771
+D LGSFK + ++NPLE LGLYMKMD+D++EE +PP ++ ++D
Sbjct: 198 SEDMLGLGSFKMESNSNPLEHLGLYMKMDEDEDEEEDPPHFSQRKVED 245
>gi|413950089|gb|AFW82738.1| hypothetical protein ZEAMMB73_647475 [Zea mays]
Length = 357
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 141/195 (72%), Gaps = 18/195 (9%)
Query: 587 SERQVSPDKLYRAALLRNRFADTILKAREKALEKGEKRDPEKLRIEREELERRHREEKAR 646
SE+QVSPDK RAALLR+RFADTILKAREKAL++ K+DPEKLR EREELER REE+AR
Sbjct: 80 SEKQVSPDKQIRAALLRSRFADTILKAREKALDQTTKKDPEKLRREREELERVQREERAR 139
Query: 647 LQAEAKAAEEARRK----AEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMED 702
LQAEAKAAE+ R++ A EAAAEAKR+RELEREAAR+ALQ MEKTVDINE F++D
Sbjct: 140 LQAEAKAAEDVRKRAEAAAADEAAAEAKRQRELEREAARKALQEMEKTVDINEGIHFLKD 199
Query: 703 LEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPP 762
LEML EQ+P+ E SP FQ + LE+L LYMK D+DDE+
Sbjct: 200 LEMLGSVTGEQIPNLVGETSPG----------FQMGSYTLEKLELYMKNDEDDEDGD--- 246
Query: 763 LTAKEPIKDVEEGEI 777
EP+ DVEEGEI
Sbjct: 247 -FTDEPVADVEEGEI 260
>gi|357476127|ref|XP_003608349.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509404|gb|AES90546.1| Bromodomain-containing protein [Medicago truncatula]
Length = 533
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 229/502 (45%), Gaps = 105/502 (20%)
Query: 52 SEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLEL 111
+E G + + + + + + +P S+N DN + + S+TE L+
Sbjct: 22 AEFMGKAPNPNPKFSNKKRTQSPSDDASSINRRSNDNHSQYV-TFNIESYSKTELHDLKN 80
Query: 112 KLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKR 171
+L ++L+Q+R L+ ++ S G+ +P L GG
Sbjct: 81 RLVSELDQIRQLKTRIES------------------GEFKPRLNHNGG------------ 110
Query: 172 APNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNT---- 227
PN ++G + GN +K + S MK C +LT+LM ++ GW+FNT
Sbjct: 111 GPNKKSGSKKFSGNKRPFPAEKELKKSKSEIGDAMKACGQILTKLMKNKSGWIFNTWIFN 170
Query: 228 -PVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQN 286
PV+ LN+ DYF +IKHPMDLGT+K K+ YS P FA DV+LTF NA+TYNP +
Sbjct: 171 TPVNATALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGH 230
Query: 287 DVHIMADTLRKYFEVRWKAIEKKL-------------------------------PVTVD 315
DV+ A L + FE ++ I++K P+ +
Sbjct: 231 DVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPEREREKVKKKDNPIPIP 290
Query: 316 MTAVPSRADDMIETETRMGMP----------------PMKKKKVSP-KETKIKA-EPVRR 357
V R + + E + P PM+ V P K+ K KA +P +R
Sbjct: 291 -PPVAKRQESLPEPASTSNQPSTSNPQLAQSPVRIPSPMRALPVKPLKQPKPKARDPNKR 349
Query: 358 VMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRK 416
M EEK L L+ L E E ++ +++ + E DE+E+D++A+ +TL+ L +
Sbjct: 350 EMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDR 409
Query: 417 LLDDY--LLEKQQKQA---------NPGPCEM---EVLNESGLSNSSMQLCKGNDLVDED 462
L+ ++ ++ K ++QA N G E+ E ++ + S Q K D VDED
Sbjct: 410 LVTNWKKMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATPPSEGKKQ--KKIDTVDED 467
Query: 463 VDIVGGNDPPVTDIPPVAIEKD 484
VDI G+D P + PPV IEKD
Sbjct: 468 VDI--GDDMPANNFPPVEIEKD 487
>gi|242055997|ref|XP_002457144.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
gi|241929119|gb|EES02264.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
Length = 482
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 131/244 (53%), Gaps = 32/244 (13%)
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A + K C LL RLM H+ WVFN PVD L + DY T+I PMDLGT+K K+ +GQY
Sbjct: 135 APVFKTCSVLLQRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLGAGQYK 194
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL------------ 310
P FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++
Sbjct: 195 SPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEVAQLSPQPPTPSS 254
Query: 311 -----PVTVDMTAVPSRADDMIET-------ETRMGMPPMKKKKVSPKETKIKAEPVRRV 358
P +D + V R+D + +T G PP+ KK PK EP +R
Sbjct: 255 AAPRKPKEIDNSRVLERSDSTVHAAAMEATPKTHTGRPPVLKK---PKAR----EPNKRD 307
Query: 359 MTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKL 417
MT EK+ LS L+ L E ++++ +K+ + +DE+E+DID+ +TL+ L +
Sbjct: 308 MTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDRF 367
Query: 418 LDDY 421
+ +Y
Sbjct: 368 VTNY 371
>gi|168024468|ref|XP_001764758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684052|gb|EDQ70457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 148/258 (57%), Gaps = 17/258 (6%)
Query: 187 GRLEPKKPAGAASSSN-AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKH 245
G+ +P + AA A ++KQC LL +LM+H+ GWVFN PVD KL + DY ++IK
Sbjct: 58 GKGKPLQKVEAARGKRVADMLKQCTTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKK 117
Query: 246 PMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA 305
PMDLGTIK K+ Y P+ FA D+RLTF+NAMTYNP +DV++MA+ L+ FE WK
Sbjct: 118 PMDLGTIKKKLHGKGYPSPVEFAEDIRLTFANAMTYNPVGHDVYVMAELLKSIFEEWWKN 177
Query: 306 IEKKLPVTVDMTA-----VPSRADDMIET-ETRMGMPPMKKKKVSPKETKIKAEPV---- 355
+ +K+ + + D + ET E R G + +++ ++P
Sbjct: 178 MSRKMEEEKRRAEKEEEMLLNDEDSVEETGEVRRGERDLSSLTRGKTSSRMASQPKPRPD 237
Query: 356 ---RRVMTNEEKRILSTELEALLEELPESIIDFLKEHS--AGETGEDELEIDIDALSDDT 410
+R MT EEKR LS LE L + E I+ +K+ + G+ EDE+E+DID+ +DT
Sbjct: 238 EVGKRAMTFEEKRKLSVNLERLPGDKLERIVQIIKKRNPDLGQN-EDEIEVDIDSFDNDT 296
Query: 411 LFALRKLLDDYLLEKQQK 428
L+ L + + +Y+ + +K
Sbjct: 297 LWELDRFVTNYMKSRGKK 314
>gi|218187737|gb|EEC70164.1| hypothetical protein OsI_00884 [Oryza sativa Indica Group]
Length = 512
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 145/281 (51%), Gaps = 36/281 (12%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDY 239
++KKGN P A A A + K C LL RLM H+ WVFNTPVD L + DY
Sbjct: 68 KSKKGNPSS-NPGLSAEARRKLYAPVFKSCGALLARLMKHKHSWVFNTPVDASALGLHDY 126
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
T+I PMDLGT+K ++ +G Y P FA DVRLTF NAM YNP DVH MA+ L F
Sbjct: 127 HTIITKPMDLGTVKSRLAAGHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMF 186
Query: 300 EVRWKAIEKKL-----------------PVTVDMTAVPSRADDMIET-------ETRMGM 335
E +W IE ++ P +D + V R+D + + G
Sbjct: 187 EEKWPEIEAEVAQLSPQPPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGR 246
Query: 336 PPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ET 394
PP+ KK PK EP +R MT EK+ LS L+ L E ++++ +K+ +
Sbjct: 247 PPVLKK---PK----AREPNKREMTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQ 299
Query: 395 GEDELEIDIDALSDDTLFALRKLLDDY---LLEKQQKQANP 432
+DE+E+DID+ +TL+ L + + +Y + + ++K NP
Sbjct: 300 HDDEIEVDIDSFDVETLWELDRFVTNYKKSISKNKRKAENP 340
>gi|125581496|gb|EAZ22427.1| hypothetical protein OsJ_06088 [Oryza sativa Japonica Group]
Length = 656
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 143/248 (57%), Gaps = 24/248 (9%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYF +IKHPMDLGTIK ++T GQY +P
Sbjct: 316 FKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPR 375
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV------------- 312
FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++
Sbjct: 376 EFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPP 435
Query: 313 -TVDMTAVPSRADD-----MIETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D ++++++R + P + + +P +R MT +EKR
Sbjct: 436 PPIDVRFL-DRSDSVKHHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKR 494
Query: 366 ILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L E + ++ +K + +DE+E++ID++ +TL+ L + + +Y
Sbjct: 495 KLSNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFVANYKKN 554
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 555 LSKQKRKA 562
>gi|357127683|ref|XP_003565508.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 494
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 172/361 (47%), Gaps = 66/361 (18%)
Query: 91 VPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQK 150
+P +LS S RR L +L +L QVR + K+++SL + +PSS + + +
Sbjct: 38 IPTVTFSLSS-SLATRRELRRRLSAELAQVRAVSKRLSSLPAP---APSSALSATDPST- 92
Query: 151 RPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSN---AMLMK 207
+ K KK PN P+G+A + A + K
Sbjct: 93 -----PLPPQPPSSKHKSKKAPPN-------------------PSGSAEARRKLYAPVFK 128
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
C LLTRLM H+ GWVFN PVD L + DY T+I PMDLGT+K ++ G Y P F
Sbjct: 129 SCGLLLTRLMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTVKSRLAEGHYKSPREF 188
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL----------------- 310
A +VRLTF NAM YNP DV+ MA+ L FE +W IE ++
Sbjct: 189 ATEVRLTFQNAMKYNPKGQDVYFMAEQLLNMFEEKWPDIEAEIAQLSPQPPTPSSAAPKK 248
Query: 311 PVTVDMTAVPSRADDMIET---------ETRMGMPPMKKKKVSPKETKIKAEPVRRVMTN 361
P +D V R+D G PP+ KK PK EP +R MT
Sbjct: 249 PREIDNGRVLERSDSTAHAAGLEATPKPHPGTGRPPVLKK---PKAR----EPNKREMTF 301
Query: 362 EEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALRKLLDD 420
EK+ LS +L+ L E ++++ +K+ +S+ +DE+E+DID+ +TL+ L + + +
Sbjct: 302 WEKQKLSNDLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFVTN 361
Query: 421 Y 421
Y
Sbjct: 362 Y 362
>gi|15219397|ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
gi|75194105|sp|Q9S7T1.1|GTE3_ARATH RecName: Full=Transcription factor GTE3, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE3; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E3;
Flags: Precursor
gi|5903104|gb|AAD55662.1|AC008017_35 Highly similar to non intermediate filament IFA binding protein
[Arabidopsis thaliana]
gi|12324313|gb|AAG52122.1|AC010556_4 hypothetical protein; 61711-63380 [Arabidopsis thaliana]
gi|56236042|gb|AAV84477.1| At1g73150 [Arabidopsis thaliana]
gi|332197298|gb|AEE35419.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
Length = 461
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 178/362 (49%), Gaps = 76/362 (20%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLE 155
++LS +S+ E R+L+ KL+ +LE+VR L K++ +N P+ +++ N G+K
Sbjct: 50 ISLSSISKLEVRNLKRKLQAELEEVRSLIKRLEPQGNNFAPVPNKKLKTANGGKK----- 104
Query: 156 SVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR 215
GG AA ++K C NLLT+
Sbjct: 105 --GGVH---------------------------------GAAADKGTVQILKSCNNLLTK 129
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
LM H+ GW+FNTPVDV+ L + DY +IK PMDLGT+K +++ Y PL FA DVRLTF
Sbjct: 130 LMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDVRLTF 189
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE--------KKLPVT-VDMTAVPSRADDM 326
+NAM YNP +DV+ MA+ L FE +W +E K+ PV +D A S
Sbjct: 190 NNAMLYNPVGHDVYHMAEILLNLFEEKWVPLETQYELLIRKQQPVRDIDFHAPVSTNTHN 249
Query: 327 IET----ETRMGMPPMKKKKVSPKETKIKAE----PVR------------------RVMT 360
+E + P KV T +AE PV+ R +T
Sbjct: 250 VEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVKPAVLPVVPEKLVEEASANRDLT 309
Query: 361 NEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFALRKLLD 419
+EKR LS +L+ L + E+++ +K+ + + + DE+E+DID+L +TL+ L + +
Sbjct: 310 FDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWELFRFVT 369
Query: 420 DY 421
+Y
Sbjct: 370 EY 371
>gi|326489531|dbj|BAK01746.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 174/371 (46%), Gaps = 60/371 (16%)
Query: 82 NIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSD 141
+ D ++ +P +L T RR L +L +L QVR K+++SL + +PSS
Sbjct: 29 SFDAHNGPLIPTVTFSLPSTPAT-RRELRRRLSAELAQVRAAYKRISSLPAP---APSSA 84
Query: 142 IRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSS 201
+ S PS L P P K S + P P+G+A +
Sbjct: 85 L-------------SATDPSTPLPPH-----------PSVSKHKSKKAPPN-PSGSAEAR 119
Query: 202 N---AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS 258
A + + C +L RLM H+ GWVFN PVD L + DY T+I PMDLGT+K ++ +
Sbjct: 120 RKLYAPVFRSCAVVLARLMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTVKSRLAA 179
Query: 259 GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTA 318
G Y P FA +VRLTF NAM YNP DV+ MA+ L FE +W IE ++
Sbjct: 180 GHYKSPREFATEVRLTFQNAMRYNPKGQDVYFMAEQLLNMFEEKWPEIEAEIAQLSPQPP 239
Query: 319 VPSRA------------------------DDMIETETRMGMPPMKKKKVS--PKETKIKA 352
PS A D + PP + + P K KA
Sbjct: 240 TPSSAPPKKQKQREREREREMDNARALERSDSTAHAAALEAPPKPQAGTARPPVLKKPKA 299
Query: 353 -EPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDT 410
+P +R MT EK+ LS +L+ L E ++++ +K+ +S+ +DE+E+DID+ +T
Sbjct: 300 RDPNKREMTFWEKQRLSNDLQDLPAEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVET 359
Query: 411 LFALRKLLDDY 421
L+ L + + +Y
Sbjct: 360 LWELDRFVTNY 370
>gi|218190413|gb|EEC72840.1| hypothetical protein OsI_06575 [Oryza sativa Indica Group]
Length = 420
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 144/248 (58%), Gaps = 24/248 (9%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYF +IKHPMDLGTIK ++T GQY +P
Sbjct: 80 FKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPR 139
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV------------- 312
FA DVRLTF NAMTYNP DVH MA+ L FEV+W IE ++
Sbjct: 140 EFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEVQWPEIEAEVQYLASCPPLPNKFPP 199
Query: 313 -TVDMTAVPSRADDM-----IETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D + +++++R + P + + +P +R MT +EKR
Sbjct: 200 PPIDVRFL-DRSDSVKHHMALDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKR 258
Query: 366 ILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L E + ++ +K + +DE+E++ID++ +TL+ L + + +Y
Sbjct: 259 KLSNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFVANYKKN 318
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 319 LSKQKRKA 326
>gi|326496376|dbj|BAJ94650.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 662
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 146/248 (58%), Gaps = 25/248 (10%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL RLM H+FGWVFN PVD + L + DYF +IKHPMDLGTIK ++T G Y DP
Sbjct: 324 FKKSSSLLCRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKGQLTRGHYRDPK 383
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL--------------P 311
FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++ P
Sbjct: 384 EFANDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVDYLASCPPLPKKFPP 443
Query: 312 VTVDMTAVPSRADDM-----IETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D + +++++R + P+ + S K+ K K + +R MT +EKR
Sbjct: 444 PPIDLRLL-ERSDSLKPHMALDSKSRPISHTPISVRTPSLKKPKAK-DLDKRDMTIDEKR 501
Query: 366 ILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L E + ++ +K + EDE+E++ID++ +TL+ L + + ++
Sbjct: 502 KLSNNLQNLPPEKLDIVVQIIKNKNLSVRQHEDEIEVEIDSMDAETLWELDRFVANFKKN 561
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 562 LSKQKRKA 569
>gi|297598920|ref|NP_001046443.2| Os02g0250300 [Oryza sativa Japonica Group]
gi|255670765|dbj|BAF08357.2| Os02g0250300 [Oryza sativa Japonica Group]
Length = 600
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 143/248 (57%), Gaps = 24/248 (9%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYF +IKHPMDLGTIK ++T GQY +P
Sbjct: 316 FKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPR 375
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV------------- 312
FA DVRLTF NAMTYNP DVH MA+ L FE +W IE ++
Sbjct: 376 EFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPP 435
Query: 313 -TVDMTAVPSRADD-----MIETETR-MGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKR 365
+D+ + R+D ++++++R + P + + +P +R MT +EKR
Sbjct: 436 PPIDVRFL-DRSDSVKHHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKR 494
Query: 366 ILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYL-- 422
LS L+ L E + ++ +K + +DE+E++ID++ +TL+ L + + +Y
Sbjct: 495 KLSNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFVANYKKN 554
Query: 423 LEKQQKQA 430
L KQ+++A
Sbjct: 555 LSKQKRKA 562
>gi|449439059|ref|XP_004137305.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449483310|ref|XP_004156552.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 538
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 134/243 (55%), Gaps = 26/243 (10%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++K C NLL RLM H+FGWVFN PVD +L + DY +I PMDLGTIK ++ Y P
Sbjct: 231 VLKSCSNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYKSP 290
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV----TVDMTAV- 319
FA DVRLTFSNA+TYNP DVH+MA+ L FE +WK IE K V VD +V
Sbjct: 291 REFAEDVRLTFSNAITYNPKGEDVHMMAEQLSNIFEEKWKTIEGKQNVGKGFQVDDGSVL 350
Query: 320 --------PSRADDMIETETR-----------MGMPPMKKKKVSPKETKIKAEPVR-RVM 359
P+ A +E+ T P V+P + K KA+ R M
Sbjct: 351 PTPTSRKSPALATRPVESRTFSRSDSTTKHFLTSNPKQPPTDVAPPDKKPKAKNHEIRDM 410
Query: 360 TNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLL 418
T EEK+ LS +L+ L + +++ +K+ + G +DE+E+DI ++ +TL+ L + +
Sbjct: 411 TYEEKQKLSIDLQDLPSDKLNNVVKIIKKRNQGLFQNDDEIELDIGSVDSETLWELERFV 470
Query: 419 DDY 421
+Y
Sbjct: 471 ANY 473
>gi|414875721|tpg|DAA52852.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 490
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 140/269 (52%), Gaps = 35/269 (13%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDY 239
++KKG G +P A A A + K C LL+RLM H+ WVFN PVD L + DY
Sbjct: 103 KSKKGG-GVPQPHLSAEARRKLYAPVFKTCAALLSRLMKHKHSWVFNKPVDASALGLHDY 161
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
T+I PMDLGT+K K+ +GQY P FA DVRLTF NAMTYNP DVH MA+ L F
Sbjct: 162 HTIITKPMDLGTVKSKLGAGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMF 221
Query: 300 EVRWKAIEKKL-------------------PVTVDMTAVPSRADDMIET-------ETRM 333
E +W IE ++ P +D + R+D + +T
Sbjct: 222 EEKWPEIEAEIAQLSPQPPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAGIEATPKTHT 281
Query: 334 GMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG- 392
G P + KK PK EP +R MT EK+ LS L+ L E ++++ +K+ +
Sbjct: 282 GRPQVLKK---PKAR----EPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSL 334
Query: 393 ETGEDELEIDIDALSDDTLFALRKLLDDY 421
+DE+E+DID+ +TL+ L + + +Y
Sbjct: 335 SQHDDEIEVDIDSFDVETLWELDRFVTNY 363
>gi|255567054|ref|XP_002524509.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223536183|gb|EEF37836.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 553
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 143/284 (50%), Gaps = 59/284 (20%)
Query: 190 EPKK--PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPM 247
EPKK N + K+CE+LL +LM HQ+GWVFN PVDV KL + DYF +IKHPM
Sbjct: 195 EPKKGGEGNIMGRCNREVFKKCEDLLEKLMKHQYGWVFNKPVDVKKLKLHDYFKIIKHPM 254
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
DLGT+K ++ Y P FA DV+LTF+NAM YN D HIMAD L K FE W IE
Sbjct: 255 DLGTVKSRLKKNWYKSPKEFAEDVKLTFNNAMKYNDKGQDAHIMADVLLKLFEEHWAIIE 314
Query: 308 KKLPVT--VDM-------------------------------------TAVPSRADDMIE 328
+ VDM + + R++ M +
Sbjct: 315 PEFINNERVDMGYDAGLPRPAPNRASAPPAPAPSPVLASAPLRKMPSESKILDRSESMTK 374
Query: 329 ----------TETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEEL 378
T G PM KK PKE +P RR MT EEK+ LS +L + +
Sbjct: 375 PMNSSMKAANMATHEGRLPMSKK---PKEI----DPQRREMTFEEKQRLSADLLDMPSDK 427
Query: 379 PESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFALRKLLDDY 421
+S++ +++ + G + DE+E+DID+ +TL+ L +L++++
Sbjct: 428 LDSVVQIIRKRNPGLCQQDDEIEVDIDSFDSETLWELDRLVNNH 471
>gi|357141014|ref|XP_003572045.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 629
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 147/249 (59%), Gaps = 26/249 (10%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K+ +LL+RLM H+FGWVFN PVD + L + DYF +IKHPMDLGTIK ++T GQY +P
Sbjct: 284 FKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKAQLTRGQYRNPK 343
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV------------- 312
FA DVRLTF NAMTYNP DVH MA+ L FE +W I+ ++
Sbjct: 344 EFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIQAEVEYLASCPPLPKKFPP 403
Query: 313 -TVDMTAVPSRADDM-----IETETR-MGMPPMKKKKVSPKETKIKAEPV-RRVMTNEEK 364
+D+ + R+D + +++++R + P + +P K KA+ + +R MT +EK
Sbjct: 404 PPIDLRLL-ERSDSLKHHMALDSKSRPLSHTPTYSVR-TPSLKKPKAKDLDKRDMTIDEK 461
Query: 365 RILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYL- 422
R LS L+ L E + ++ +K + +DE+E++ID++ +TL+ L + + ++
Sbjct: 462 RKLSNNLQNLPPEKLDIVVQIIKNKNLSVRQHDDEIEVEIDSMDAETLWELDRFVANFKK 521
Query: 423 -LEKQQKQA 430
L KQ+++A
Sbjct: 522 NLSKQKRKA 530
>gi|222617974|gb|EEE54106.1| hypothetical protein OsJ_00865 [Oryza sativa Japonica Group]
Length = 508
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 177/372 (47%), Gaps = 59/372 (15%)
Query: 90 GVPLQVLTLSKMSQTERRSLELKLKT-DLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDG 148
G ++ +T S S R + T +L QVR K+++SL + +PSS + + +
Sbjct: 49 GTHVRTVTFSLSSSPAARRELRRRLTAELAQVRATCKRLSSLPAP---APSSALSATDPS 105
Query: 149 QKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQ 208
P V K K +KKGN P A A A + K
Sbjct: 106 TPLPPHPPVS--------KHK-----------SKKGNPSS-NPGLSAEARRKLYAPVFKS 145
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C LL RLM H+ WVFNTPVD L + DY T+I PMDLGT+K ++ +G Y P FA
Sbjct: 146 CGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGHYKSPREFA 205
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-----------------P 311
DVRLTF NAM YNP DVH MA+ L FE +W IE ++ P
Sbjct: 206 GDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEVAQLSPQPPTPSSAAPRKP 265
Query: 312 VTVDMTAVPSRADDMIET-------ETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEK 364
+D + V R+D + + G PP+ KK PK EP +R MT EK
Sbjct: 266 KEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKK---PKAR----EPNKREMTFWEK 318
Query: 365 RILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDY-- 421
+ LS L+ L E ++++ +K+ + +DE+E+DID+ +TL+ L + + +Y
Sbjct: 319 QRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDRFVTNYKK 378
Query: 422 -LLEKQQKQANP 432
+ + ++K NP
Sbjct: 379 SISKNKRKAENP 390
>gi|297842055|ref|XP_002888909.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
gi|297334750|gb|EFH65168.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 178/358 (49%), Gaps = 80/358 (22%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLE 155
++LS +S+ E R+L+ KL+ +LE+VR L K++ + P+ +++ N G+K +
Sbjct: 50 ISLSSISKLEVRNLKRKLQAELEEVRSLIKRLEPQAP----VPNKKLKTANGGKKSGV-- 103
Query: 156 SVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR 215
GA ++K C NLLT+
Sbjct: 104 ---------------------------------------HGAGDKGTVQILKSCNNLLTK 124
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
LM H+ GWVFNTPVD ++L + DY T+++ PMDLGT+K +++ Y PL FA DVRLTF
Sbjct: 125 LMKHKSGWVFNTPVDAVRLGLHDYHTIVEKPMDLGTVKTRLSKSWYKSPLEFAEDVRLTF 184
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE--------KKLPVT-VDM---------- 316
+NAM YNP +DVH MA+ L FE +W +E K+ PV +D+
Sbjct: 185 NNAMLYNPVGHDVHHMAEFLLNLFEEKWAPLETQYGLLNRKQQPVRDIDLHAPVSTNTHN 244
Query: 317 ------------TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEK 364
T V +R + E+ T P + V P E ++ R +T +EK
Sbjct: 245 IEPFPLPPPPPPTVVENRTLERAESITNPVKPAV--LPVVP-EKPVEEASADRDLTFDEK 301
Query: 365 RILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFALRKLLDDY 421
R LS +L+ L + E+++ +K+ + + + DE+E+DID+L +TL+ L + + +Y
Sbjct: 302 RRLSEDLQDLPYDKLEAVVQIIKKSNPELSQQDDEIELDIDSLDLETLWELYRFVTEY 359
>gi|110736040|dbj|BAE99992.1| hypothetical protein [Arabidopsis thaliana]
Length = 461
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 177/362 (48%), Gaps = 76/362 (20%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLE 155
++LS +S+ E R+L+ KL+ +LE+VR L K++ +N P+ +++ N G+K
Sbjct: 50 ISLSSISKLEVRNLKRKLQAELEEVRSLIKRLEPQGNNFAPVPNKKLKTANGGKK----- 104
Query: 156 SVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR 215
GG AA ++K C NLLT+
Sbjct: 105 --GGVH---------------------------------GAAADKGTVQILKSCNNLLTK 129
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
LM H+ GW+FNTPVDV+ L + DY +IK PMDL T+K +++ Y PL FA DVRLTF
Sbjct: 130 LMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLETVKTRLSKSLYKSPLEFAEDVRLTF 189
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE--------KKLPVT-VDMTAVPSRADDM 326
+NAM YNP +DV+ MA+ L FE +W +E K+ PV +D A S
Sbjct: 190 NNAMLYNPVGHDVYHMAEILLNLFEEKWVPLETQYELLIRKQQPVRDIDFHAPVSTNTHN 249
Query: 327 IET----ETRMGMPPMKKKKVSPKETKIKAE----PVR------------------RVMT 360
+E + P KV T +AE PV+ R +T
Sbjct: 250 VEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVKPAVLPVVPEKLVEEASANRDLT 309
Query: 361 NEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFALRKLLD 419
+EKR LS +L+ L + E+++ +K+ + + + DE+E+DID+L +TL+ L + +
Sbjct: 310 FDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWELFRFVT 369
Query: 420 DY 421
+Y
Sbjct: 370 EY 371
>gi|359475584|ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
Length = 561
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 230/493 (46%), Gaps = 108/493 (21%)
Query: 66 TASED-SCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQ 124
+AS+D S +R + N Y F + S+ + L+ +L ++LE+++ L
Sbjct: 64 SASDDASSFNQRSIVEFNRGRYVTFNI-------GSYSRKDLVQLKNRLVSELEKIQNLS 116
Query: 125 KKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKG 184
++ S ++ L D R+ N Q+ P KK A N R P
Sbjct: 117 NRIES--GDLQLRSGGD-RTANKQQR---------------PNNKKIAGNKRPPP----F 154
Query: 185 NSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+SGR PK+ +++ NA LMK C LT+LM H+ WVFN+PVDV+ + + DY +IK
Sbjct: 155 DSGR-GPKR----SAAENASLMKLCGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYHQIIK 209
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
PMDLGT+K KI Y PL FAADVRLTF NA+ YNP +DVH+MA+ L FE +K
Sbjct: 210 RPMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFK 269
Query: 305 AIEKKL-------------PVTVDMTAVPSRAD---------DMIETETRMGMP---PMK 339
+ KL ++A+ + + I T R+ P P+
Sbjct: 270 PVYNKLEEDERDQERIIVGGGRGGVSAIAGTSGGEELQGSSWNHIPTPERLKKPSPKPVA 329
Query: 340 KK-------------------KVSPKETKIKAEPVRRVMT-------------NEEKRIL 367
KK + P + ++A PV+ + T + KR +
Sbjct: 330 KKPERMQVPIPATGSSNPPSVQSVPTPSPMRAPPVKPLATRPSSGKQPKPKAKDPNKREM 389
Query: 368 STE----LEALLEELPESIIDFLKEHSAGETGE-----DELEIDIDALSDDTLFALRKLL 418
S E L L+ LP+ +D + + + + G DE+E+DI+A+ +TL+ L +L+
Sbjct: 390 SLEEKHKLGLGLQSLPQEKMDQVVQIISKKNGHLTQDGDEIELDIEAVDTETLWELDRLV 449
Query: 419 DDY--LLEKQQKQA---NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGNDPPV 473
++ ++ K ++QA N M E L+ + + K + +EDVDI G++ P
Sbjct: 450 TNWKKMVSKIKRQALMVNNNTSSMNERTEPSLAPAMAKKPKKGEAGEEDVDI--GDEIPT 507
Query: 474 TDIPPVAIEKDAA 486
PPV IEKD A
Sbjct: 508 ATFPPVEIEKDDA 520
>gi|414875719|tpg|DAA52850.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
gi|414875720|tpg|DAA52851.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 948
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 140/269 (52%), Gaps = 35/269 (13%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDY 239
++KKG G +P A A A + K C LL+RLM H+ WVFN PVD L + DY
Sbjct: 103 KSKKGG-GVPQPHLSAEARRKLYAPVFKTCAALLSRLMKHKHSWVFNKPVDASALGLHDY 161
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
T+I PMDLGT+K K+ +GQY P FA DVRLTF NAMTYNP DVH MA+ L F
Sbjct: 162 HTIITKPMDLGTVKSKLGAGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMF 221
Query: 300 EVRWKAIEKKL-------------------PVTVDMTAVPSRADDMIET-------ETRM 333
E +W IE ++ P +D + R+D + +T
Sbjct: 222 EEKWPEIEAEIAQLSPQPPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAGIEATPKTHT 281
Query: 334 GMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG- 392
G P + KK PK EP +R MT EK+ LS L+ L E ++++ +K+ +
Sbjct: 282 GRPQVLKK---PKAR----EPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSL 334
Query: 393 ETGEDELEIDIDALSDDTLFALRKLLDDY 421
+DE+E+DID+ +TL+ L + + +Y
Sbjct: 335 SQHDDEIEVDIDSFDVETLWELDRFVTNY 363
>gi|297843426|ref|XP_002889594.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335436|gb|EFH65853.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 137/265 (51%), Gaps = 43/265 (16%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
G + + + K C LL RLM H+ GWVFN PVDV L + DY+T+I+HPMDLGTIK
Sbjct: 411 VGHGFGAGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKS 470
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP--- 311
+ Y P FA DVRLTF NAMTYNP DVH+MA TL + FE RW IE
Sbjct: 471 ALMKNLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREM 530
Query: 312 --VTVDMTAVPSRADDMIETETRMG----MPPMKKKKV---------------------- 343
VT +P+ +R+G PP+ +
Sbjct: 531 RFVTGYEMNLPTHT-----MRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGSTPTSA 585
Query: 344 -----SPKETKIKA-EPVRRVMTNEEKRILSTELEALLEELPESIIDFL-KEHSAGETGE 396
+P K KA EP +R MT EEK+ LS L+ L + ++I+ + K ++A + +
Sbjct: 586 TPSGRTPALKKPKANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRD 645
Query: 397 DELEIDIDALSDDTLFALRKLLDDY 421
+E+E+DID++ +TL+ L + + +Y
Sbjct: 646 EEIEVDIDSVDPETLWELDRFVTNY 670
>gi|15221424|ref|NP_172113.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|30679613|ref|NP_849601.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|334182337|ref|NP_001184922.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|75174943|sp|Q9LNC4.1|GTE4_ARATH RecName: Full=Transcription factor GTE4; AltName:
Full=Bromodomain-containing protein GTE4; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4
gi|8844128|gb|AAF80220.1|AC025290_9 Contains similarity to a Ring3 protein from Homo sapiens gi|133157
and contains a bromodomain PF|00439. EST gb|F14211 comes
from this gene [Arabidopsis thaliana]
gi|332189843|gb|AEE27964.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189844|gb|AEE27965.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189845|gb|AEE27966.1| global transcription factor group E4 [Arabidopsis thaliana]
Length = 766
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 133/263 (50%), Gaps = 39/263 (14%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
G + + K C LL RLM H+ GWVFN PVDV L + DY+T+I+HPMDLGTIK
Sbjct: 411 VGHGFGAGTKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKS 470
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK------ 308
+ Y P FA DVRLTF NAMTYNP DVH+MA TL + FE RW IE
Sbjct: 471 ALMKNLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREM 530
Query: 309 --------KLPV--------------------TVDMTAVPSRADDMIETETRMGMPPMKK 340
LP T+D +R T P +
Sbjct: 531 RFVTGYEMNLPTPTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGR 590
Query: 341 KKVSPKETKIKA-EPVRRVMTNEEKRILSTELEALLEELPESIIDFL-KEHSAGETGEDE 398
+P K KA EP +R MT EEK+ LS L+ L + ++I+ + K ++A + ++E
Sbjct: 591 ---TPALKKPKANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEE 647
Query: 399 LEIDIDALSDDTLFALRKLLDDY 421
+E+DID++ +TL+ L + + +Y
Sbjct: 648 IEVDIDSVDPETLWELDRFVTNY 670
>gi|449438275|ref|XP_004136914.1| PREDICTED: uncharacterized protein LOC101209352 [Cucumis sativus]
gi|449521741|ref|XP_004167888.1| PREDICTED: uncharacterized protein LOC101228592 [Cucumis sativus]
Length = 539
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 175/337 (51%), Gaps = 58/337 (17%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
LMK C +L +LM ++G +FN PVDV+ L + DY+ +IKHPMDLGT+K ++ Y P
Sbjct: 169 LMKTCAQILNKLMKQKYGLIFNKPVDVVGLGLHDYYDIIKHPMDLGTVKSTLSKNLYDSP 228
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
L FA DVRLTF+NAM YNP ++VHI+A+ FE + + +KL
Sbjct: 229 LDFAEDVRLTFNNAMRYNPKGHEVHILAEQWLVKFEEMFLPVSRKLGALKQPDPYEEELQ 288
Query: 311 ---------------------PVTVDMTAVPSRADDMIETETRMGMP-PMKKKKVSP-KE 347
PV V VPS ++ + P P++ +V P K+
Sbjct: 289 SSSWNHVEEVENVNFNSNGNKPVEV---VVPSSLTKPPSVQSPVRTPSPVRAPQVKPVKQ 345
Query: 348 TKIKA-EPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDA 405
K KA +P +R M+ EEK L L+ L E + +I +K+ S DE+E+DI+A
Sbjct: 346 PKPKAKDPNKRDMSLEEKHRLGIGLQGLPPEKMDQVIQIVKKRSGHLRQDGDEIELDIEA 405
Query: 406 LSDDTLFALRKLLDDY--LLEKQQKQA----------NPGPCEMEVLNE--SGLSNSSMQ 451
+ +TL+ L +L+ ++ ++ K ++QA N E+ +NE + + + +
Sbjct: 406 VDTETLWELDRLVTNWKKMMSKVKRQALINDNTNADSNKENNEISSVNEMMNEVKTEAKK 465
Query: 452 LCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKDAANR 488
L KG D+ +EDVDI G P+ PPV IE+DAA R
Sbjct: 466 LRKG-DVGEEDVDI-GDEVIPMGGFPPVEIERDAAAR 500
>gi|112292667|gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
Length = 428
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 188/370 (50%), Gaps = 76/370 (20%)
Query: 186 SGRLEPKKPAGAASSSNAML---MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTV 242
SGR + K+PA + + ML MKQC +LT+LM H+ GW+FN PVDV+ + + DY +
Sbjct: 15 SGR-DSKRPASEPAPTGKMLSSMMKQCGQILTKLMRHKHGWIFNVPVDVVGMGLHDYNQI 73
Query: 243 IKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF--- 299
IKHPMDLGT+K I YS PL FA+DVRLTF+NA++YNP +DV+ MA+ L F
Sbjct: 74 IKHPMDLGTVKLNIGKNLYSSPLDFASDVRLTFNNALSYNPKGHDVYAMAEQLLVRFEEM 133
Query: 300 -------------------EVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMG------ 334
E+R + ++P+ ++P+R TR G
Sbjct: 134 FEPAYKKFEDAQQRKISAGEIRRSSWSHQIPMP---ESIPNRDPLSSSAATRPGGFAHPM 190
Query: 335 ------------------------MPPMKKKKVSPKETKIKA-EPVRRVMTNEEKRILST 369
P M + + K+ K KA +P +R M+ EEK L
Sbjct: 191 PLSTPQPQAFPQALASTSAPAPAPKPFMAMRSATVKQPKPKAKDPNKREMSFEEKHKLGL 250
Query: 370 ELEALLEELPESIIDFLKEHSAGETGE--DELEIDIDALSDDTLFALRKLLDDY--LLEK 425
L++L +E E ++ +++ + G + DE+E+DI+ + +TL+ L + + + L+ K
Sbjct: 251 SLQSLPQEKMEQVVQIIRKRN-GHLAQDGDEIELDIEVVDTETLWELDRFVYNCKKLMSK 309
Query: 426 QQKQA--NPGPCEMEVLNESGLSNS-------SMQLCKGNDLVDEDVDIVGGNDPPVTDI 476
++QA + E N+S +S+S S + K ++ +EDVDI G + P ++
Sbjct: 310 IKRQALVSNNQNTAEEGNKSPVSDSHEAAEAASAKKIKKGEIGEEDVDI--GEEIPTSNF 367
Query: 477 PPVAIEKDAA 486
PPV IEKDA
Sbjct: 368 PPVEIEKDAG 377
>gi|224116690|ref|XP_002317367.1| global transcription factor group [Populus trichocarpa]
gi|222860432|gb|EEE97979.1| global transcription factor group [Populus trichocarpa]
Length = 347
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 174/374 (46%), Gaps = 92/374 (24%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLE 155
+ L+ ++E + L+ KL +L QVR L+KK+ S+ +S SS ND +
Sbjct: 8 INLNSRPKSEIKHLKRKLVNELHQVRSLRKKLDSIE----MSQSS----FNDNLNNRITG 59
Query: 156 SVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR 215
+ GG + + K L+K+C LL +
Sbjct: 60 NSGGHRIETLDRFSK---------------------------------YLVKECGELLGK 86
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
LM HQ+GWVFN PVDV L + DYF +IKHPMDLGT+K +++ Y P FA DVRLTF
Sbjct: 87 LMKHQYGWVFNVPVDVKMLKLHDYFKIIKHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTF 146
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFEVRW---KA---IEKKLPVTVDMT------------ 317
+NAM YN DVH MADTL K FE W KA +K+ + D +
Sbjct: 147 NNAMKYNEKGQDVHTMADTLLKIFEENWANFKAETNFDKRGEMGYDASLQTPASKRASGP 206
Query: 318 ------------AVPSRA--DDMIETETR----------MGMPPMK-----KKKVSPKET 348
PS A + ETR +G P MK + VS K
Sbjct: 207 HASSPACGSASACAPSPAPFQQTMPLETRTLGGTDSLTELGHPNMKAADQGRASVSKKP- 265
Query: 349 KIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALS 407
K + + MT EEK+ LS L++L E ES++ +++ + G EDE+E+DID+
Sbjct: 266 --KKDTDKSKMTYEEKQKLSISLQSLPSEKLESVVQIIRKRNPGLFQQEDEIEVDIDSFD 323
Query: 408 DDTLFALRKLLDDY 421
++TL+ L + +Y
Sbjct: 324 NETLWELHSNVTNY 337
>gi|226495673|ref|NP_001142282.1| uncharacterized protein LOC100274451 [Zea mays]
gi|194707994|gb|ACF88081.1| unknown [Zea mays]
Length = 350
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 125/230 (54%), Gaps = 32/230 (13%)
Query: 217 MSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFS 276
M H+ WVFNTPVD L + DY T+I PMDLGT+K K+ +GQY P FA DVRLTF
Sbjct: 1 MKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQYRSPREFAGDVRLTFR 60
Query: 277 NAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-----------------PVTVDMTAV 319
NAMTYNP DVH MA+ L FE +W IE +L P +D +
Sbjct: 61 NAMTYNPKGQDVHFMAEQLLNMFEEKWLEIEAELAQLSPQPPTPSSAAPRKPKEIDNSRA 120
Query: 320 PSRADDMIET-------ETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELE 372
R+D + +T G PP+ KK PK EP +R MT EK+ LS L+
Sbjct: 121 LERSDSTVHAAGMEATPKTHNGRPPVSKK---PK----AREPNKRDMTFWEKQRLSNNLQ 173
Query: 373 ALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALRKLLDDY 421
L E ++++ +K+ +S+ +DE+E+DID+ +TL+ L + + +Y
Sbjct: 174 DLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFVTNY 223
>gi|357474555|ref|XP_003607562.1| Bromodomain-containing factor [Medicago truncatula]
gi|355508617|gb|AES89759.1| Bromodomain-containing factor [Medicago truncatula]
Length = 980
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 117/242 (48%), Gaps = 53/242 (21%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
K C +LL +LM HQ+ WVFNTPVDV L + DYFT+I +PMDLGT+K ++ Y P
Sbjct: 655 FFKSCSSLLEKLMKHQYAWVFNTPVDVDGLGLHDYFTIITNPMDLGTVKTRLNKNWYKSP 714
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-------------- 310
FA DVRLTF NAMTYNP DVH MA+ L K FE RW IE
Sbjct: 715 KEFAEDVRLTFHNAMTYNPKGQDVHAMAEQLSKIFEDRWAIIESDYNREMRYGMDYGAPS 774
Query: 311 -----------PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVM 359
P +DM + R + T M P + +PK+ K K +P +R M
Sbjct: 775 PLSRRVPAFTPPPPLDMRRILDRQEPFARTPRSMNNTP-SSRTPAPKKPKAK-DPNKRDM 832
Query: 360 TNEEKRILSTELEALLEELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLD 419
T +EK+ LST DE+E+D DA+ + L+ L + +
Sbjct: 833 TYDEKQKLST--------------------------NDEIEVDFDAVDAEILWELDRFVL 866
Query: 420 DY 421
+Y
Sbjct: 867 NY 868
>gi|218199690|gb|EEC82117.1| hypothetical protein OsI_26141 [Oryza sativa Indica Group]
Length = 484
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
+QC ++L +LM H+ GW+FNTPVD + IPDYF VI++PMDLGT+K K+TS QYS+P
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 122
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
FAADVRLTFSNAM YNPP NDVH +AD L K F+ WK +E+K
Sbjct: 123 FAADVRLTFSNAMKYNPPGNDVHAIADQLNKIFDSEWKLLERKW 166
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 117/195 (60%), Gaps = 26/195 (13%)
Query: 592 SPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQAE 650
SP K RAA+L++RFA TI+KA++KAL + G+K DP KL++E+E LE+R +EEKAR++A+
Sbjct: 303 SPSKALRAAMLKSRFAGTIVKAQQKALLDHGKKIDPVKLQLEKERLEKRQQEEKARIEAQ 362
Query: 651 AKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQ 710
KAAE A + E E + KRE ER AAR AL MM+KTVDI +NS F++DLE L
Sbjct: 363 VKAAEAAAQLKLDE---EMRMKREQERRAARLALHMMKKTVDI-DNSDFLKDLENLSKKW 418
Query: 711 DEQLPSFTAEASPD--HLQDRLGSFKFQGSTNPLEQLGLYMKMD------DDDEEEVEPP 762
+ P D L LGS PLE+LGL+MK D + E+ V P
Sbjct: 419 ELNPPGKLIVDFVDGIDLPPGLGS--------PLERLGLFMKKDLEEEVEHEMEDSVSPS 470
Query: 763 LTAKEPIKDVEEGEI 777
DVEEGEI
Sbjct: 471 TEI-----DVEEGEI 480
>gi|115472285|ref|NP_001059741.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|33146482|dbj|BAC79591.1| putative RING3 protein [Oryza sativa Japonica Group]
gi|113611277|dbj|BAF21655.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|215717115|dbj|BAG95478.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
+QC ++L +LM H+ GW+FNTPVD + IPDYF VI++PMDLGT+K K+TS QYS+P
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 122
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
FAADVRLTFSNAM YNPP NDVH +AD L K F+ WK +E+K
Sbjct: 123 FAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKW 166
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 117/195 (60%), Gaps = 26/195 (13%)
Query: 592 SPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQAE 650
SP K RAA+L++RFA TI+KA++KAL + G+K DP KL++E+E LE+R +EEKAR++A+
Sbjct: 303 SPSKALRAAMLKSRFAGTIVKAQQKALLDHGKKIDPAKLQLEKERLEKRQQEEKARIEAQ 362
Query: 651 AKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQ 710
KAAE A + E E + KRE ER AAR AL MM+KTVDI +NS F++DLE L
Sbjct: 363 VKAAEAAAQLKLDE---EMRMKREQERRAARLALHMMKKTVDI-DNSDFLKDLENLSKKW 418
Query: 711 DEQLPSFTAEASPD--HLQDRLGSFKFQGSTNPLEQLGLYMKMD------DDDEEEVEPP 762
+ P D L LGS PLE+LGL+MK D + E+ V P
Sbjct: 419 ELNPPGKLIVDFVDGIDLPPGLGS--------PLERLGLFMKKDLEEEVEHEMEDSVSPS 470
Query: 763 LTAKEPIKDVEEGEI 777
DVEEGEI
Sbjct: 471 TEI-----DVEEGEI 480
>gi|356554838|ref|XP_003545749.1| PREDICTED: transcription factor GTE11-like [Glycine max]
Length = 536
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 179/394 (45%), Gaps = 109/394 (27%)
Query: 184 GNSGRLEPKKPAGAASSSN-------------------AMLMKQCENLLTRLMSHQFGWV 224
G S PKKP+ S N LMK C +L +LM H+ GW+
Sbjct: 114 GQSFNGHPKKPSNKKVSGNKRPLPSNSATDLKRSHSEVGSLMKGCSQVLQKLMKHKHGWI 173
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
FN PVDV+ L + DY+ VIK PMDLGT+K ++ +Y+ P FA+DVRLTF+NA+ YNP
Sbjct: 174 FNAPVDVVGLQLTDYYDVIKQPMDLGTVKSNLSMNKYTTPSDFASDVRLTFNNALAYNPK 233
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKKLPVTVDM---------------------------- 316
+DV+ +A+ L FE ++ + +K +V
Sbjct: 234 GHDVYTVAELLLTRFEELYRPLHEKFEGSVGHDRESEEELQASSWSHVEPERVKKKENPT 293
Query: 317 --------------------TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKA-EPV 355
++ P + T + M PP+K K+ K KA +P
Sbjct: 294 PPPPPPPEKLQQEPPQPPASSSNPPLLQSPVRTPSPMRAPPVKPL----KQPKPKAKDPN 349
Query: 356 RRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFAL 414
+R M+ EEK L L++L E E ++ ++ + + DE+E+DI+A+ +TL+ L
Sbjct: 350 KRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELDIEAVDTETLWEL 409
Query: 415 RKLLDDY--LLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLV------------- 459
+L+ +Y ++ K ++QA G + N ++Q KGN+ +
Sbjct: 410 DRLVTNYKKMVSKIKRQALMG----------NIYNDNVQANKGNEELPAREKVERAAVEA 459
Query: 460 ---------DEDVDIVGGNDPPVTDIPPVAIEKD 484
DEDVDI G++ P + PPV IEKD
Sbjct: 460 KKPKKVEAGDEDVDI--GDEIPTSMFPPVEIEKD 491
>gi|222637108|gb|EEE67240.1| hypothetical protein OsJ_24385 [Oryza sativa Japonica Group]
Length = 536
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
+QC ++L +LM H+ GW+FNTPVD + IPDYF VI++PMDLGT+K K+TS QYS+P
Sbjct: 115 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 174
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
FAADVRLTFSNAM YNPP NDVH +AD L K F+ WK +E+K
Sbjct: 175 FAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKW 218
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 117/195 (60%), Gaps = 26/195 (13%)
Query: 592 SPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQAE 650
SP K RAA+L++RFA TI+KA++KAL + G+K DP KL++E+E LE+R +EEKAR++A+
Sbjct: 355 SPSKALRAAMLKSRFAGTIVKAQQKALLDHGKKIDPAKLQLEKERLEKRQQEEKARIEAQ 414
Query: 651 AKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQ 710
KAAE A + E E + KRE ER AAR AL MM+KTVDI +NS F++DLE L
Sbjct: 415 VKAAEAAAQLKLDE---EMRMKREQERRAARLALHMMKKTVDI-DNSDFLKDLENLSKKW 470
Query: 711 DEQLPSFTAEASPD--HLQDRLGSFKFQGSTNPLEQLGLYMKMD------DDDEEEVEPP 762
+ P D L LGS PLE+LGL+MK D + E+ V P
Sbjct: 471 ELNPPGKLIVDFVDGIDLPPGLGS--------PLERLGLFMKKDLEEEVEHEMEDSVSPS 522
Query: 763 LTAKEPIKDVEEGEI 777
DVEEGEI
Sbjct: 523 TEI-----DVEEGEI 532
>gi|357447117|ref|XP_003593834.1| Bromodomain-containing factor [Medicago truncatula]
gi|355482882|gb|AES64085.1| Bromodomain-containing factor [Medicago truncatula]
Length = 520
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 154 LESVGGPSVVLAPKGKKRAPNGRNGPQTKKG--NSGRLEP----KKPAGAASSSNAMLMK 207
+E V GP K + NGR P K S + EP + P +
Sbjct: 22 IEVVSGPKCQFGEKVSQLDENGRCNPIKKSSLLGSNKREPSGNIEGPKNKRQKLDRKGSH 81
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
+C +L L+SH + WVF TPVD + LNIPDYFTVI HPMDLGTIK K+ Y F
Sbjct: 82 KCATILKCLISHPYSWVFKTPVDPVALNIPDYFTVISHPMDLGTIKFKLDKNIYYSKEEF 141
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
AADVRLTFSNAMTYNPP NDVH+MA L K FE +WK ++KK
Sbjct: 142 AADVRLTFSNAMTYNPPSNDVHLMAKELNKLFERKWKDMDKKW 184
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 117/195 (60%), Gaps = 17/195 (8%)
Query: 590 QVSPDKLYRAALLRNRFADTILKAREKALEK-GEKRDPEKLRIEREELERRHREEKARLQ 648
Q+SP + R A+LR+RFA TILKA++ L K G+K DP K+++E+E LER REE+AR++
Sbjct: 335 QLSPKRALRYAMLRSRFAGTILKAQQNTLLKHGDKGDPMKMQLEKERLERIQREEQARIE 394
Query: 649 AEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRI 708
A+ KAAE A A E +++ E EREAAR A++ M+++VDI N +++LE L
Sbjct: 395 AQIKAAEAA---ERTRAEEELRQQIEKEREAARAAIEQMKRSVDIEHNLEVVKELESLSG 451
Query: 709 AQDEQLPSFTAEASPDH---LQDRLGSFKFQGSTNPLEQLGLYMKMD---DDDEEEVEPP 762
+ S+ A S + +RL +F+ NPLE+LGL++K D D+DEE +
Sbjct: 452 CR----LSYKAMGSRNDNRAAMERLDKLQFE---NPLERLGLFIKDDYIADEDEEILNEV 504
Query: 763 LTAKEPIKDVEEGEI 777
EEGEI
Sbjct: 505 GGGGVVGGSWEEGEI 519
>gi|356554832|ref|XP_003545746.1| PREDICTED: uncharacterized protein LOC100819363 [Glycine max]
Length = 529
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 208/456 (45%), Gaps = 101/456 (22%)
Query: 94 QVLTLSKMSQTERRSLELK--LKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKR 151
Q +T + S T++ + K L ++LEQ+R L+ ++ S S +S N K+
Sbjct: 65 QYVTFNIASCTKKELNDFKNLLVSELEQIRKLRNQIES-------SEFQPGQSLNGHPKK 117
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P + V G N R P + R + S LMK C
Sbjct: 118 PSSKKVSG--------------NKRPWPSNSAKDLKR---------SHSEAGNLMKCCSQ 154
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L +LM H+ GWVFN PVD++ L + DY +IK PMDLGT+K ++ Y+ P FA+DV
Sbjct: 155 VLQKLMKHKHGWVFNAPVDIVGLKLHDYCDIIKQPMDLGTVKSNLSKNVYATPADFASDV 214
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL--------------------- 310
RLTF+NA+ YNP +DV+ MA+ L FE ++ + +K
Sbjct: 215 RLTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSISHDRESEEELQASSWSH 274
Query: 311 ------------------------PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPK 346
P+ ++ P + T + M +PP+K K
Sbjct: 275 VEPERVKKKEKPPPPPPAKLQQEPPLPPASSSNPPLLQSPVRTPSPMRVPPVKPL----K 330
Query: 347 ETKIKA-EPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDID 404
+ K KA +P +R M+ EEK L L++L E E ++ ++ + + DE+E+DI+
Sbjct: 331 QPKPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELDIE 390
Query: 405 ALSDDTLFALRKLLDDY--LLEKQQKQA--------------NPGPCEMEVLNESGLSNS 448
A+ +TL+ L +L+ +Y ++ K ++QA N G E+ + +
Sbjct: 391 AVDTETLWELDRLVTNYKKMVSKIKRQALMGNTNNNNNDAQSNKGNGELPASEKVDGAPV 450
Query: 449 SMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEKD 484
++ K + +ED+DI G++ P + PPV IEKD
Sbjct: 451 EVKKAKKVEAGEEDIDI--GDEMPTSMFPPVEIEKD 484
>gi|297850172|ref|XP_002892967.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
gi|297338809|gb|EFH69226.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
Length = 482
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 72/366 (19%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLE 155
++LS +S+ E R+L+ KLK++L++VR L K+ P ++
Sbjct: 55 ISLSSISKLELRNLKRKLKSELDEVRSLIKR---------FDPEVNL------------- 92
Query: 156 SVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR 215
GG +A G GRN + K GN G KK A + K C +LLT+
Sbjct: 93 --GGNIGSMAKTGVV----GRN-KKLKTGNGG---GKKSGHGAEKGTVQIFKNCNSLLTK 142
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
LM H+ WVF+ PVD L + DY ++K PMDLGT+K K+ Y PL FA DVRLTF
Sbjct: 143 LMKHKCAWVFHVPVDAEGLGLHDYHNIVKEPMDLGTVKTKLGKNLYKSPLDFAEDVRLTF 202
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE-------KKLPVTVDM-------TAVP- 320
+NA+ YNP +DVH A+ L FE +W +IE +K T D+ T P
Sbjct: 203 NNAILYNPVGHDVHRFAELLLNMFEDKWVSIEMQYDNLHRKFKPTRDIEFPAPASTIAPI 262
Query: 321 ----------------------SRADDMIETETRMGMPPMKKK-KVSPKETKIKAEPV-R 356
+ E E M +P + +P + + + PV
Sbjct: 263 VEPLPAVPTPPSPSPPPPPQPPVLENTTWEREESMTIPVEPEAVTTAPDKAEEEEAPVNN 322
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFALR 415
R +T EEKR LS EL+ L + E+++ +K+ + + + DE+E+DID+L +TL+ L
Sbjct: 323 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQQDDEIELDIDSLDINTLWELY 382
Query: 416 KLLDDY 421
+ + Y
Sbjct: 383 RFVTGY 388
>gi|356549487|ref|XP_003543125.1| PREDICTED: uncharacterized protein LOC100802622 [Glycine max]
Length = 531
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 176/390 (45%), Gaps = 103/390 (26%)
Query: 184 GNSGRLEPKKPAGAASSSN-------------------AMLMKQCENLLTRLMSHQFGWV 224
G S PKKP+G S N LMK C +L +L+ H+ GWV
Sbjct: 111 GQSLNGHPKKPSGKKISGNKRPLPSNSAKDLKRSHSEVGNLMKCCSQVLQKLIKHKHGWV 170
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVDV+ L + DY +IK PMDLGT+K ++ Y+ P FA+DVRLTF+NA+ YNP
Sbjct: 171 FKAPVDVVGLKLHDYCDIIKQPMDLGTVKSNLSKNVYATPADFASDVRLTFNNALAYNPK 230
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKKL---------------------------------- 310
+DV+ MA+ L FE ++ + +K
Sbjct: 231 GHDVYTMAEQLLARFEELYRPVHEKFEGSIVHDRESEEELQASSWSQVEPERVKKKENPI 290
Query: 311 ----------PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKA-EPVRRVM 359
P ++ P + T + M PP+K K+ K KA +P +R M
Sbjct: 291 PPAKLHKEPPPQHPASSSNPPLVQSPVRTPSPMRAPPVKPL----KQPKPKAKDPNKRDM 346
Query: 360 TNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLL 418
+ EEK L L++L E E ++ ++ + + DE+E+DI+A+ +TL+ L +L+
Sbjct: 347 SLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELDIEAVDTETLWELDRLV 406
Query: 419 DDY--LLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGN-------------------- 456
+Y ++ K ++QA ++ +N+ +Q KGN
Sbjct: 407 TNYKKMVSKIKRQA--------LMGNIDNNNNDVQSNKGNGELPSSEKVDGGPVEVKKPK 458
Query: 457 --DLVDEDVDIVGGNDPPVTDIPPVAIEKD 484
+ DED+DI G++ P + PPV IEKD
Sbjct: 459 KVEAGDEDIDI--GDEMPTSMFPPVEIEKD 486
>gi|414880940|tpg|DAA58071.1| TPA: hypothetical protein ZEAMMB73_643963 [Zea mays]
Length = 1085
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 113/170 (66%), Gaps = 18/170 (10%)
Query: 612 KAREKALEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEA-- 669
K R K+DPEKLR EREELER REE+ARLQAEAKAAE+ R++AEA AA EA
Sbjct: 790 KLRLSQYHPTTKKDPEKLRHEREELERVQREERARLQAEAKAAEDVRKRAEAAAADEAAA 849
Query: 670 --KRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQ 727
KR+REL+REAAR+ALQ MEKTVDINE F++DLEML EQ+P+ E SP
Sbjct: 850 EAKRQRELDREAARKALQEMEKTVDINEGIHFLKDLEMLGSVTGEQIPNLVGETSP---- 905
Query: 728 DRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEI 777
FQ +N LE+LGLY+K D+DDE+ EP+ DVEEGEI
Sbjct: 906 ------GFQMGSNTLEKLGLYVKNDEDDEDGD----FTDEPVADVEEGEI 945
>gi|217074676|gb|ACJ85698.1| unknown [Medicago truncatula]
Length = 471
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 216/483 (44%), Gaps = 103/483 (21%)
Query: 52 SEGFGSSGRVDTEMTASEDSCAPKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLEL 111
+E G + + + + + + +P S+N DN + + S+TE L+
Sbjct: 22 AEFMGKAPNPNPKFSNKKRTQSPSDDASSINRRSNDNHSQYV-TFNIESYSKTELHDLKN 80
Query: 112 KLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKR 171
+L ++L+Q+R + ++ S G+ +P L GG
Sbjct: 81 RLVSELDQIRQHKTRIES------------------GEFKPRLNHNGG------------ 110
Query: 172 APNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNT---- 227
PN ++G + GN +K + S MK C +LT+LM ++ GW+FNT
Sbjct: 111 GPNKKSGSKKFSGNKRPFPAEKELKKSKSEIGDAMKACGQILTKLMKNKSGWIFNTWIFN 170
Query: 228 -PVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQN 286
PV+ LN+ DYF +IKHPMDLGT+K K+ YS P FA DV+LTF NA+TYNP +
Sbjct: 171 TPVNATALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGH 230
Query: 287 DVHIMADTLRKYFEVRWKAIEKKL-------------------------------PVTVD 315
DV+ A L + FE ++ I++K P+ +
Sbjct: 231 DVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPEREREKVKKKDNPIPIP 290
Query: 316 MTAVPSRADDMIETETRMGMP----------------PMKKKKVSP-KETKIKA-EPVRR 357
V R + + E + P PM+ V P K+ K KA +P +R
Sbjct: 291 -PPVAKRQESLPEPASTSNQPSTSNPQLAQSPVRIPSPMRALPVKPLKQPKPKARDPNKR 349
Query: 358 VMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRK 416
M EEK L L+ L E E ++ +++ + E DE+E+D++A+ +TL+ L +
Sbjct: 350 EMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDR 409
Query: 417 LLDDY--LLEKQQKQA---------NPGPCEM---EVLNESGLSNSSMQLCKGNDLVDED 462
L+ ++ ++ K ++QA N G E+ E ++ + S Q K D VDED
Sbjct: 410 LVTNWKKMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATPPSEGKKQ--KKIDTVDED 467
Query: 463 VDI 465
VDI
Sbjct: 468 VDI 470
>gi|357476121|ref|XP_003608346.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509401|gb|AES90543.1| Bromodomain-containing protein [Medicago truncatula]
Length = 518
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 211/440 (47%), Gaps = 86/440 (19%)
Query: 95 VLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS--LSSNVVLSPSSDIRSCNDGQKRP 152
+S S++E L T+LEQ+R LQ ++ S L S RS ++G
Sbjct: 68 TFNVSSYSKSELNELRNCFVTELEQIRQLQTRIESGELKS----------RSSHNG---- 113
Query: 153 LLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENL 212
GG + A KK + N R P K+ + E G+A MK C +
Sbjct: 114 -----GGSAKKSA--NKKFSGNKRPFPAEKELKRSKSE----VGSA-------MKACGQI 155
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVR 272
L +LM + GW+F++PVD + LN+ DYF +IKHPMDLGT+K K+ YS P FA DV+
Sbjct: 156 LQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVK 215
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK---------LPVTVDMTAVPSRA 323
LTF NA+TYNP +DV+ A L + FE ++ I++K L + P R
Sbjct: 216 LTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPERE 275
Query: 324 DDMI-ETETRMGMPP--MKKKKVSPKETKIKAEPVRR---------VMTNEEKRIL---- 367
+ + + + + +PP K++++ P+ +P V T R L
Sbjct: 276 RERVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKP 335
Query: 368 ----STELEALLEELP----ESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLL 418
+T + LP E ++ +++ + E DE+E+D++A+ +TL+ L +L+
Sbjct: 336 LKQPNTSWDLGCRFLPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLV 395
Query: 419 DDY--LLEKQQKQA---------NPGPCEM---EVLNESGLSNSSMQLCKGNDLVDEDVD 464
++ ++ K ++QA N G E+ E ++ + S Q K D VDEDVD
Sbjct: 396 TNWKKMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATPPSEGKKQ--KKIDTVDEDVD 453
Query: 465 IVGGNDPPVTDIPPVAIEKD 484
I G+D P D PPV IEKD
Sbjct: 454 I--GDDMPANDFPPVEIEKD 471
>gi|224056335|ref|XP_002298808.1| global transcription factor group [Populus trichocarpa]
gi|222846066|gb|EEE83613.1| global transcription factor group [Populus trichocarpa]
Length = 474
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 197/426 (46%), Gaps = 102/426 (23%)
Query: 67 ASEDSCA----PKRKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRV 122
AS+D+ + P+ N G+ F V S+ E L+ +L +LE++R
Sbjct: 65 ASDDASSINRRPQNNHQDFNTGGFVTFNV-------GSYSKKELIELKNRLVHELEKIRD 117
Query: 123 LQKKVAS------LSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGR 176
L+ ++ S SSN + G KRP AP+
Sbjct: 118 LKNRIESSESQIRQSSNFSYKKQTSTNKKVSGNKRPF-----------------PAPSNF 160
Query: 177 NGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNI 236
N N R P+ NA LMK C +L++LM H+ G++FN+PVDV+ + +
Sbjct: 161 N-------NLKRSNPE---------NAQLMKNCSQILSKLMKHKLGYIFNSPVDVVGMQL 204
Query: 237 PDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
DY +IK PMDLGT+K K+T Y P FAADVRLTF+NAM YNP ++V+++A+
Sbjct: 205 HDYHDIIKSPMDLGTVKSKLTKNLYESPRDFAADVRLTFNNAMKYNPKGHEVYMLAEQFL 264
Query: 297 KYFEVRWKAIEKKLPVTVD-----------------MTAVPSRA----DDMIETETR--- 332
FE ++ I++K+ D + P R DD ++ +
Sbjct: 265 TRFEDFYRPIKEKVGEDFDEEENDQVQEVQASSWDHIRREPERVNQIDDDFMQVTAKSDP 324
Query: 333 ---------MGMP--------------PMKKKKVSP-KETKIKA-EPVRRVMTNEEKRIL 367
+ P PM+ +V P K+ K KA +P +R M+ EEK L
Sbjct: 325 IGHQMHQQPLQQPTGLNQNPNLVRTPSPMRMPQVKPVKQPKPKAKDPNKREMSLEEKHKL 384
Query: 368 STELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFALRKLLDDY--LLE 424
L++L +E E ++ +++ + E DE+E+DI+A+ +TL+ L + + +Y ++
Sbjct: 385 GVGLQSLPQEKMEQVVQIIRKRNGHLRQEGDEIELDIEAVDTETLWELDRFVTNYKKMVS 444
Query: 425 KQQKQA 430
K ++QA
Sbjct: 445 KIKRQA 450
>gi|440790084|gb|ELR11372.1| Bromodomain containing protein [Acanthamoeba castellanii str. Neff]
Length = 844
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 130/236 (55%), Gaps = 22/236 (9%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
G AS S A+ KQC+ LL LM+H+FGW FN PVD + LNIPDYF VIKHPMDLGTIK
Sbjct: 132 GGPASLSWAL--KQCQVLLKTLMTHKFGWPFNQPVDPIALNIPDYFDVIKHPMDLGTIKE 189
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL---- 310
++ SG Y FA DVRL F+N TYN P +D+ +MA TL F +++ ++ K+
Sbjct: 190 QLDSGSYETEEEFAEDVRLVFTNTFTYNQPGSDIVVMASTLSSLFNEKFEILKAKIEERG 249
Query: 311 ---PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRIL 367
P V+ T R D M + + KK + + + A +R MT EEK+ L
Sbjct: 250 RDAPEGVEETLKELR-DSMSSVQREL---ERIKKTPNGRAGRAGAAEDQRPMTFEEKKKL 305
Query: 368 STELEALLEELPESIIDFLKEH-----SAGETGEDELEIDIDALSDDTLFALRKLL 418
S + L + ++ + E S+GE E+EIDIDAL+ TL L + +
Sbjct: 306 SHAINNLPSDNLGMVVKIIHERMPQLTSSGE----EIEIDIDALNPATLRHLERYV 357
>gi|224103835|ref|XP_002313212.1| global transcription factor group [Populus trichocarpa]
gi|222849620|gb|EEE87167.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 140/231 (60%), Gaps = 14/231 (6%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
LMK C +L++LM + G++FNTPVDV+ L + DY +IK+PMDLGT+K ++ Y P
Sbjct: 1 LMKNCSQILSKLMKQKLGYIFNTPVDVVGLQLHDYHDIIKNPMDLGTVKTNLSKNLYESP 60
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRAD 324
FAADVRLTF+NAM YNP ++V+I+A+ F+ ++ I++K M P+
Sbjct: 61 RDFAADVRLTFNNAMKYNPKGHEVYILAEQFLTRFQDLYRPIKEKQQQPTGMNQNPNS-- 118
Query: 325 DMIETETRMGMPPMKKKKVSP-KETKIKA-EPVRRVMTNEEKRILSTELEALLEELPESI 382
+ T + PM+ +V P K+ K KA +P +R M EEK L L++L +E E +
Sbjct: 119 --VRTPS-----PMRVPQVKPLKQPKPKAKDPNKREMNLEEKHKLGVGLQSLPQEKMEQV 171
Query: 383 IDFLKEHSAGETGE-DELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA 430
+ +++ + E DE+E+DI+A+ +TL+ L + + +Y ++ K ++QA
Sbjct: 172 VQIIRKRNGHLRQEGDEIELDIEAVDTETLWELDRFVTNYKKMVSKIKRQA 222
>gi|295828222|gb|ADG37780.1| AT1G06230-like protein [Neslia paniculata]
Length = 210
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 75/113 (66%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
G + + + K C LL RLM H+ GWVFN PVDV L + DYFT+I+HPMDLGTIK
Sbjct: 92 VGHGFGAGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKS 151
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
+T Y P FA DVRLTF NAMTYNP DVH+MA+TL + FE RW IE
Sbjct: 152 ALTKNMYKSPREFADDVRLTFHNAMTYNPAGQDVHVMAETLLQIFEERWAVIE 204
>gi|295828214|gb|ADG37776.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828218|gb|ADG37778.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 75/113 (66%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
G + + + K C LL RLM H+ GWVFN PVDV L + DYFT+I+HPMDLGTIK
Sbjct: 92 VGHGFGAGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKS 151
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
+T Y P FA DVRLTF NAMTYNP DVH+MA+TL + FE RW IE
Sbjct: 152 ALTKNXYKSPREFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIE 204
>gi|295828216|gb|ADG37777.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 75/113 (66%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
G + + + K C LL RLM H+ GWVFN PVDV L + DYFT+I+HPMDLGTIK
Sbjct: 92 VGHGFGAGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKS 151
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
+T Y P FA DVRLTF NAMTYNP DVH+MA+TL + FE RW IE
Sbjct: 152 ALTKNMYKSPREFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIE 204
>gi|295828210|gb|ADG37774.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828220|gb|ADG37779.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 75/113 (66%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
G + + + K C LL RLM H+ GWVFN PVDV L + DYFT+I+HPMDLGTIK
Sbjct: 92 VGHGFGAGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKS 151
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
+T Y P FA DVRLTF NAMTYNP DVH+MA+TL + FE RW IE
Sbjct: 152 ALTKNMYKSPREFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIE 204
>gi|255557483|ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223541189|gb|EEF42745.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 570
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 97/155 (62%), Gaps = 9/155 (5%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ QC +L+ LM+H GWVF PVD KL IPDYF+VI +PMDLGT+K K+ + QY
Sbjct: 82 VIHQCTSLVKSLMNHPCGWVFKEPVDPEKLEIPDYFSVITNPMDLGTVKSKLENNQYFGA 141
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTV----DMTAVP 320
FAADVRLTFSNA+ YNPP N VH MA+ L+K FE RWKA+E+K + D
Sbjct: 142 EEFAADVRLTFSNALLYNPPLNYVHKMAEKLKKIFETRWKALEEKWNYQIAKDGDGKPFN 201
Query: 321 SRADDMIETETRM-GMPPMKK----KKVSPKETKI 350
+R ++ +T + PP+ K K+ P E K+
Sbjct: 202 ARPKEVGDTRQKCPQTPPLHKAELPKRSKPSEVKL 236
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 158/296 (53%), Gaps = 29/296 (9%)
Query: 491 KCSSSSSSS------SESGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEK 544
KC + S+ S+S +SSD S S G + A V+ +S +
Sbjct: 293 KCGTCGRSACQCILPSDSAQASSDISSEKSWGKDHHACSTDTSKMDVQGKCMSMLQM--- 349
Query: 545 KSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHH-EGESAP-SERQVSPDKLYRAALL 602
S+ PD + +V++LD+ + + + D + EG P + Q+SP K RAA+L
Sbjct: 350 -SKSDPD-SDGAVSALDEENICPSSQLMTPATDANSVEGWRPPIFDVQLSPTKALRAAML 407
Query: 603 RNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKA 661
+ RFADTILKA+ K L + G+K DP KL+ E+E LE+R EEKAR++A+ +AAE A RK
Sbjct: 408 KRRFADTILKAQHKTLLDHGDKADPVKLQEEKERLEKRQLEEKARIEAQIRAAEAASRKR 467
Query: 662 EAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEA 721
E E +++RE EREAAR ALQ MEKT +I +N +++LE L SF
Sbjct: 468 E---EIELRKQREKEREAARVALQKMEKTAEIEQNLEIVKELEKLSGCSLSYSYSF-GRR 523
Query: 722 SPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEPIKDVEEGEI 777
P+ + +G S + LE+LGL MK D D++E+ I D EEGEI
Sbjct: 524 GPEIAEGDVGGAH---SCSLLERLGLIMKDDTVDDDEI--------LIGDEEEGEI 568
>gi|356557783|ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 565
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 74/103 (71%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
QC +L LMSH + WVF+ PVD + L+IPDYFT+I HPMDLGTIK K+ YS F
Sbjct: 82 QCATILKSLMSHTYSWVFSKPVDPIALSIPDYFTIISHPMDLGTIKSKLEKNIYSGTEEF 141
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
AADVRLTFSNAM YNPP NDVH+MA L K F+ +WK + +K
Sbjct: 142 AADVRLTFSNAMKYNPPSNDVHLMAKELSKIFDRKWKDLGRKW 184
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 132/221 (59%), Gaps = 16/221 (7%)
Query: 543 EKKSEGVPDIGNSSVNSLDQVELNSQGKPVAIVADGHH-EGESAPS-ERQVSPDKLYRAA 600
EKKS+ PD + +V+SLD + + V D E S P Q+SP K RAA
Sbjct: 342 EKKSD--PD-SDGAVSSLDSEHVCPSSQHVTPTTDASSGEVWSTPVLPVQLSPKKALRAA 398
Query: 601 LLRNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARR 659
+L++RFADTILKA++K L + G+K +P+K++ E+E LER REE+AR++A+ K AE A
Sbjct: 399 MLKSRFADTILKAQQKTLLDHGDKGNPQKMQQEKERLERIQREERARIEAQIKIAEAA-- 456
Query: 660 KAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTA 719
A A E++++RE EREAAR A++ M++TVDI N +++LE L S+ A
Sbjct: 457 -ARMRAEEESRQRREKEREAARAAIEKMKRTVDIEHNVEIIKELESLSGC----TLSYKA 511
Query: 720 EASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMD---DDDEE 757
+ + L + NPLE+LGL++K D D+DEE
Sbjct: 512 VGCRNGYKVALETLDKPQFENPLERLGLFIKEDFTADEDEE 552
>gi|345288391|gb|AEN80687.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288393|gb|AEN80688.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288395|gb|AEN80689.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288397|gb|AEN80690.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288399|gb|AEN80691.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288401|gb|AEN80692.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288403|gb|AEN80693.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288405|gb|AEN80694.1| AT1G06230-like protein, partial [Capsella rubella]
Length = 197
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 73/109 (66%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
G + + + K C LL RLM H+ GWVFN PVDV L + DYFT+I+HPMDLGTIK
Sbjct: 88 VGHGFGAGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKS 147
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+T Y P FA DVRLTF NAMTYNP DVH+MA+TL + FE RW
Sbjct: 148 ALTKNMYKSPREFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERW 196
>gi|297791027|ref|XP_002863398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309233|gb|EFH39657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 488
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 77/103 (74%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
QC LL LM H+ GW+F PVD +KL IPDYF+VI+ PMDLGT+K K+ YS+ F
Sbjct: 65 QCLVLLRFLMEHRVGWLFEEPVDPVKLEIPDYFSVIRKPMDLGTVKSKLLKNVYSNADEF 124
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
AADVRLTF+NAM YNPP N+VH +A +++ FEVRWK ++KK+
Sbjct: 125 AADVRLTFANAMRYNPPGNEVHTIAKEIKEIFEVRWKLLKKKM 167
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 88/150 (58%), Gaps = 11/150 (7%)
Query: 554 NSSVNSLDQVE--LNSQ-GKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTI 610
N SV S ++ +NSQ KP + + + P+ V P+K RAA+L+ ++A+TI
Sbjct: 287 NGSVTSKNERNGSVNSQLDKPSNVALLDNELKTTFPALPPVPPEKALRAAILKAQYAETI 346
Query: 611 LKAREKA-LEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEA 669
LKA+ + L++ K D +L+IE+E++ER REEKAR++AE +AA+ A A A AE
Sbjct: 347 LKAKHRVVLDQNNKADLIRLQIEKEQMERAQREEKARIEAEMRAAKVA---ARMRAQAEL 403
Query: 670 KRKRELEREAARQALQMMEKTVDINENSRF 699
K+KRE + R L M+K D +N+
Sbjct: 404 KQKRETQ----RLELAKMKKGFDFEQNNHL 429
>gi|224061031|ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
gi|222847582|gb|EEE85129.1| global transcription factor group [Populus trichocarpa]
Length = 564
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 74/103 (71%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ +QC +LL LM+H GWVFN PVD + L IPDYFTVI +PMDLGT+K K+ Y+
Sbjct: 81 VTQQCSSLLKSLMAHPAGWVFNKPVDPVALKIPDYFTVISNPMDLGTVKSKLGKNFYASI 140
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
FAAD+RLTFSNAM YNPP N+VH MA+ L FE WKA+E
Sbjct: 141 NEFAADIRLTFSNAMLYNPPSNNVHRMAEELNGIFETGWKALE 183
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 114/193 (59%), Gaps = 26/193 (13%)
Query: 591 VSPDKLYRAALLRNRFADTILKAREKA-LEKGEKRDPEKLRIEREELERRHREEKARLQA 649
+SP K R A +++RFADTILKA+ KA L+ G+K DP K+R +E LERR +EEKAR++A
Sbjct: 390 LSPSKALRYATIKHRFADTILKAQNKAVLDNGDKADPMKMRQVKERLERRQQEEKARIEA 449
Query: 650 EAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEML--- 706
+ +AAE A E KR+RE EREAAR LQ MEKT I +N +++LEML
Sbjct: 450 QIRAAEAA---TRRREETEMKRQREREREAARIELQKMEKTTGIEQNLDILKELEMLCGC 506
Query: 707 RIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMK--MDDDDEEEVEPPLT 764
I+ + S E + +GS PLE+LGL++K ++D DEE ++
Sbjct: 507 SISLNYHFGSGRMEVVKGEIGACIGS--------PLERLGLFIKDDIEDVDEEFLD---- 554
Query: 765 AKEPIKDVEEGEI 777
+D EEGEI
Sbjct: 555 -----EDGEEGEI 562
>gi|57282314|emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 153/511 (29%), Positives = 231/511 (45%), Gaps = 118/511 (23%)
Query: 66 TASEDSCAPKRKCI--SLNIDGYDNFG--VPLQVLTLSKMSQTERRSLELKLKTDLEQVR 121
TAS+D+ + ++ I + N+DG NFG + V++ +K E RS +L ++EQ+R
Sbjct: 68 TASDDAYSFNQRPIESTTNVDGL-NFGGYLTFNVVSYNKGEVNELRS---RLLAEVEQIR 123
Query: 122 VLQKKVAS--LSSNVVLSPSSDIRSCN-DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNG 178
L+ ++ S LS+ +P S +S G KRP + G S K K+ PNG
Sbjct: 124 NLKDRIESGQLSTT---NPRSQGKSKKLSGNKRP---TPSGSS-----KDPKKLPNG--- 169
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
+ N G P G + +MK+C +L +LM H+ GW+FN PVD L + D
Sbjct: 170 --VENRNFG--NPVGGGGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHD 225
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL--- 295
Y +IK P+DLGT+K + Y P FAADVRLTF+NA+ YNP + V+ A+ L
Sbjct: 226 YHQIIKRPIDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNGFAEQLLGR 285
Query: 296 -------------------RKYFEV------RWKAIEK----KLPVTVDMTAVPSRADDM 326
R Y V W I K P + + + + M
Sbjct: 286 FEDMFRPLQDKMNKLEGGRRDYHPVDELQGSSWNHIPTPERVKKPKATPVPHISKKQERM 345
Query: 327 -------------------------IETETRMGMPPMKKKKVSP-----KETKIKA-EPV 355
+ T + + PP K + + K+ K +A +P
Sbjct: 346 QNHSSASTPSLPVPPPNPPARQQSPLSTPSPVRAPPSKPESAAKVPAMGKQPKPRAKDPN 405
Query: 356 RRVMTNEEKRILSTELEALLEE-LPE--SIIDFLKEHSAGETGEDELEIDIDALSDDTLF 412
+RVM EEK L L++L +E +P+ II EH A + DE+E+DI+AL +TL+
Sbjct: 406 KRVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDG--DEIELDIEALDTETLW 463
Query: 413 ALRKLLDDY--LLEKQQKQA----NPGP---------CEMEVLNESGLS----NSSMQLC 453
L + + ++ ++ K ++QA N GP V G + N S +
Sbjct: 464 ELDRFVTNWKKMVSKTKRQALMINNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKP 523
Query: 454 KGNDLVDEDVDIVGGNDPPVTDIPPVAIEKD 484
K D+ +EDV+I P T PPV IEKD
Sbjct: 524 KKGDVGEEDVEIEDDE--PATHFPPVEIEKD 552
>gi|255580043|ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223529579|gb|EEF31529.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 536
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 79/110 (71%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ QC +L+ LM H GWVF PVD KL+IPDYF++I +PMDLGT+K K+ + QY +
Sbjct: 82 VIHQCASLVKSLMDHPCGWVFKEPVDPDKLHIPDYFSIITNPMDLGTVKSKLENNQYFES 141
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTV 314
FAADVRLTFSNA+ YN P N VH MA+ L+K FE RWKA+E+K +
Sbjct: 142 EEFAADVRLTFSNALLYNTPPNYVHNMAEKLKKIFETRWKALEEKWNYQI 191
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 102/189 (53%), Gaps = 36/189 (19%)
Query: 590 QVSPDKLYRAALLRNRFADTILKAR-EKALEKGEKRDPEKLRIEREELERRHREEKARLQ 648
Q+SP K RAA+++ RFADTI KA+ +K L G+K DP KL+ E+E E R EEKAR++
Sbjct: 381 QLSPTKALRAAMIKRRFADTIFKAQLKKLLPHGDKADPVKLQQEKERFEMRQLEEKARIE 440
Query: 649 AEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRI 708
A+ +AAE+ RE EREAAR ALQ ME T +I +N +++LE L
Sbjct: 441 AQIRAAEQ----------------REKEREAARIALQKMENTAEIEQNIEIIKELEKLSG 484
Query: 709 AQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEP 768
SF P+ S + LE+LGL MK D D++E+ L
Sbjct: 485 CSLSYSYSF-GRRGPEGAH----------SCSLLERLGLIMKDDIVDDDEI---LNG--- 527
Query: 769 IKDVEEGEI 777
DVEEGEI
Sbjct: 528 --DVEEGEI 534
>gi|356549150|ref|XP_003542960.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 566
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 71/103 (68%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
QC +L LMSH + WVF PVD + L+IPDYFT+I HPMDLGTIK K+ YS F
Sbjct: 82 QCATILKSLMSHSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLERNIYSGTEEF 141
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
A DVRLTFSNAM YNPP NDVH+MA L K F+ +WK +K
Sbjct: 142 ADDVRLTFSNAMKYNPPGNDVHMMAKELSKIFDRKWKDFGRKW 184
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 116/192 (60%), Gaps = 20/192 (10%)
Query: 590 QVSPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQ 648
Q+SP K RAA+L++RFADTILKA++K L + G+K +P+K++ E+E LER REE+AR++
Sbjct: 389 QLSPKKALRAAILKSRFADTILKAQQKTLLDHGDKGNPQKMQQEKERLERIQREERARIE 448
Query: 649 AEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRI 708
A+ K AE A A A E++++RE EREA+R A++ M++TVDI N +++LE L
Sbjct: 449 AQIKTAEAA---ARMRAEEESRQRREKEREASRAAIEKMKRTVDIEHNMEIIKELESLSG 505
Query: 709 AQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMD---DDDEEEVEPPLTA 765
S+ A + + L + NPLE+LGL++K D D DEE +
Sbjct: 506 CT----LSYKAVGGRNGYKVALETLDKHQFENPLERLGLFIKEDFTTDLDEEVLNGGF-- 559
Query: 766 KEPIKDVEEGEI 777
EEGEI
Sbjct: 560 -------EEGEI 564
>gi|255554567|ref|XP_002518322.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223542542|gb|EEF44082.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 634
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 124/221 (56%), Gaps = 29/221 (13%)
Query: 96 LTLSKMSQTERRSLELK--LKTDLEQVRVLQKKV-ASLSSNVVLSPSSDIRSCND---GQ 149
+T + S +++ LELK L +LEQ+R L+ ++ +S S + +P+ + + N G
Sbjct: 141 VTFNIGSYSKKELLELKSRLVAELEQIRQLKNRIDSSQSFQIRSTPNFNGKKQNKKVTGN 200
Query: 150 KRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQC 209
KRP + V K KR+ + P+ N LMK+C
Sbjct: 201 KRPFPSATTNYGFVA--KDVKRSDLYNSHPE---------------------NVQLMKKC 237
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+LT+LM H+FG++FN PVDV ++N+ DYF +IK PMDLGT+K K+ S +Y P+ FAA
Sbjct: 238 GQMLTKLMKHKFGYIFNEPVDVERMNLHDYFEIIKKPMDLGTVKKKLGSNEYESPIDFAA 297
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
DVRLTF+NAM YNP ++V+ A+ FE ++ I +KL
Sbjct: 298 DVRLTFNNAMKYNPKGHEVYTFAEQFLSRFEELFRPIREKL 338
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 327 IETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFL 386
+ T + M PP+K K+ + K +P +R M+ EEK L L++L +E E ++ +
Sbjct: 431 VRTPSPMRAPPVKPVKLPKPKAK---DPNKREMSLEEKHKLGVGLQSLPQEKMEQVVQII 487
Query: 387 KEHSAGETGE-DELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQANPG--PCEMEVL- 440
++ + + DE+E+DI+A+ +TL+ L + + +Y ++ K ++QA G P V
Sbjct: 488 RKRNGHLRQDGDEIELDIEAVDTETLWELDRFVTNYKKMVSKIKRQALMGIAPTGNAVSE 547
Query: 441 -NESGLSNSSMQLC-----KGNDLVDEDVDIVGGNDPPVTDIPPVAIEKD 484
N+ N + + K D DEDVDI G++ P++ PPV IEKD
Sbjct: 548 GNKDVSVNERIDITEAKKPKKGDAGDEDVDI--GDEMPMSSFPPVEIEKD 595
>gi|295828212|gb|ADG37775.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 137 bits (346), Expect = 2e-29, Method: Composition-based stats.
Identities = 64/112 (57%), Positives = 75/112 (66%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
G + + + K C LL RLM H+ GWVFN PVDV L + DYFT+I+HPMDLGTIK
Sbjct: 93 GHGFGAGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSA 152
Query: 256 ITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
+T Y P FA DVRLTF NAMTYNP DVH+MA+TL + FE RW IE
Sbjct: 153 LTKNIYKSPREFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIE 204
>gi|242070257|ref|XP_002450405.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
gi|241936248|gb|EES09393.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
Length = 605
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%)
Query: 197 AASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
AAS ++ +++ C N++ +L+ H+ GW+F PVD + IPDYF VI +PMDLGT+K K+
Sbjct: 54 AASMKSSRMIRLCGNIVRKLIDHKGGWLFKEPVDPVLYGIPDYFDVIHNPMDLGTVKNKL 113
Query: 257 TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
T QY FAADVRLTFSNAM YNPP+NDVH +A L F+ W+++E+K V
Sbjct: 114 TKKQYVSIEEFAADVRLTFSNAMKYNPPENDVHKVAKELNGIFDSEWESVERKFRV 169
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 131/212 (61%), Gaps = 24/212 (11%)
Query: 552 IGNSSVNSLDQVELNSQGKPVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTIL 611
IGN S+ D + P+A A G ES + +SP K RAA+LR+RFA TI+
Sbjct: 300 IGNGSLLCND-----TSTSPLASSAQGE---ESYLHDEPLSPSKALRAAMLRSRFAGTIV 351
Query: 612 KAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAK 670
KA++KAL + G+ DP KL++E+E LE+R +EEKAR++A+ KAAE A ++ E E +
Sbjct: 352 KAQQKALLDHGKNIDPVKLKLEKERLEKRQQEEKARIEAQVKAAEAAAQRKFDE---EMR 408
Query: 671 RKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASP--DHLQD 728
KRE EREAAR AL+MM+KTVDI+ NS F+++LE S T +++P + D
Sbjct: 409 MKREREREAARLALRMMKKTVDID-NSDFLKELENF---------SETWQSNPPGKLIVD 458
Query: 729 RLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVE 760
+ G +PLE+LGL+MK D +DE E E
Sbjct: 459 FIDGDLPPGLGSPLERLGLFMKNDFEDEVEQE 490
>gi|357134548|ref|XP_003568879.1| PREDICTED: transcription factor GTE8-like, partial [Brachypodium
distachyon]
Length = 574
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
Query: 200 SSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
S NA +QC+N+L +LM H GW+F+ PVD + IPDYF VI++PMDLGT+K K+T+
Sbjct: 57 SMNASQARQCKNVLEKLMGHTGGWLFHEPVDPVLFGIPDYFDVIRNPMDLGTVKKKLTNK 116
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAV 319
Y FAADVRLTFSNAM YNPP N VH +A+ L F+ WK E+K D V
Sbjct: 117 NYPSTDEFAADVRLTFSNAMKYNPPGNFVHTVAEQLNGIFDSEWKLYERKW---RDRNPV 173
Query: 320 PSR 322
P R
Sbjct: 174 PER 176
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 107/164 (65%), Gaps = 13/164 (7%)
Query: 591 VSPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQA 649
+SP K RAA+L+ RFA TI+KA++KAL + G+ DP KL++E+E LE+R REEKAR++A
Sbjct: 304 LSPTKALRAAILKGRFAGTIVKAQQKALLDHGQIIDPAKLQMEKERLEKRQREEKARIEA 363
Query: 650 EAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIA 709
+ KAAE A A+ + E + KRE +RE AR ALQMM+KTVDI+ NS F++DLE +
Sbjct: 364 QVKAAEAA---AQLKLDEEMRMKREQQRETARLALQMMKKTVDID-NSDFLKDLENMSKK 419
Query: 710 QDEQLPSFTAEASPDHLQDRLGSFKF-QGSTNPLEQLGLYMKMD 752
+ P + D + + G +PLE+LGL+MK D
Sbjct: 420 WELNPPGRL-------IVDLVDGMELPPGLGSPLERLGLFMKKD 456
>gi|224116480|ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
gi|222860376|gb|EEE97923.1| global transcription factor group [Populus trichocarpa]
Length = 567
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 72/106 (67%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ +QC LL LM H GWVFN PVD + LNIPDYF++I PMDLGT+K K+ Y+
Sbjct: 86 VTQQCSALLKSLMVHPAGWVFNKPVDPVALNIPDYFSIISIPMDLGTVKSKLGKNCYASI 145
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
FA D+RLTFSNAM YNPP N+VH MA+ L FE WKA+E K
Sbjct: 146 KEFADDIRLTFSNAMLYNPPTNNVHKMAEELNGIFETSWKALEDKW 191
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 150/280 (53%), Gaps = 31/280 (11%)
Query: 490 SKCSSSSSSSSE----SGSSSSDSDSGSSSGSEPDAAKASVPANAVEENLVSGANLDEKK 545
S CSS S++ + S S+ ++SD S S D S + E+++ +
Sbjct: 291 SNCSSCGSNTCQCRLQSDSNHTNSDISSERSSGRDQRACSTDTSKPEKSMPV-----PQM 345
Query: 546 SEGVPDIGNSSVNSLDQVELNSQGK---PVAIVADGHHEGESAPSERQVSPDKLYRAALL 602
S+ PD + +V++LD + + P A A G E S+ + +SP K R A +
Sbjct: 346 SKSDPD-SDGAVSALDDENICPSSQLTTPAADAASG--EDWSSLFDVPLSPTKALRYATI 402
Query: 603 RNRFADTILKAREKA-LEKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKA 661
++RFADTILKA+ KA L G+K DP K+R E+E LERR REEK+ ++A+ +AAE A +
Sbjct: 403 KHRFADTILKAQNKAPLHDGDKADPMKMRQEKERLERRQREEKSWIEAQIRAAEAA---S 459
Query: 662 EAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEML---RIAQDEQLPSFT 718
E K +RE EREAAR ALQ MEKTV+I +N +LE L I+ D + S
Sbjct: 460 RRREEMELKMQREREREAARIALQKMEKTVEIEQNLDIQRELERLCGCSISFDFRFGSGK 519
Query: 719 AE-ASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEE 757
E + +GS PLE+LGL+MK D +DE+
Sbjct: 520 MEVVKKGEIGACIGS--------PLERLGLFMKDDIEDED 551
>gi|414588437|tpg|DAA39008.1| TPA: hypothetical protein ZEAMMB73_513409 [Zea mays]
Length = 577
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 79/114 (69%)
Query: 197 AASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
AAS ++ +++ C N++ +L+ H+ GW+F PVD IPDYF VI+ PMDLGTIK K+
Sbjct: 53 AASMKSSRMIRLCGNIVRKLIDHKCGWLFKEPVDPDLYGIPDYFDVIRSPMDLGTIKNKL 112
Query: 257 TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
T +Y FAADVRLTFSNAM YNPP NDVHI A L + F+ W+++E+K
Sbjct: 113 TKKKYVSIEEFAADVRLTFSNAMKYNPPGNDVHIFAKELNEMFDSEWESVERKF 166
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 119/181 (65%), Gaps = 16/181 (8%)
Query: 583 ESAPSERQVSPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHR 641
ES + +SP + RAA+LR+RFA TI+KA++KAL + G+ DP KL++E+E LE+R +
Sbjct: 321 ESYLHDEPLSPSRALRAAMLRSRFAGTIVKAQQKALLDHGKNIDPVKLQLEKERLEKRQQ 380
Query: 642 EEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFME 701
EEKAR++A+ KAAE A ++ E E + KR+ EREAAR AL+MM+KTVDI+ NS F++
Sbjct: 381 EEKARIEAQVKAAEAAAQQKFEE---EMRMKRKQEREAARLALRMMKKTVDID-NSDFLK 436
Query: 702 DLEMLRIAQDEQLPSFTAEASP--DHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEV 759
+LE S T +A+P + D + G +PLE+LGL+MK D +DE E
Sbjct: 437 ELENF---------SKTWQANPPGKLIVDFISGDLPPGLGSPLERLGLFMKEDFEDEVEQ 487
Query: 760 E 760
E
Sbjct: 488 E 488
>gi|428176256|gb|EKX45141.1| hypothetical protein GUITHDRAFT_108789 [Guillardia theta CCMP2712]
Length = 220
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 119/218 (54%), Gaps = 24/218 (11%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+K+C N+L +L +H WVFN PVD KL +PDY VIK PMDLGT+K + G ++P
Sbjct: 13 WVKKCGNILKQLSAHPNSWVFNEPVDAEKLGLPDYHIVIKRPMDLGTVKSNLEKGVLANP 72
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRAD 324
F DV L F NAMTYNP +DVH+MA TL+ FE +W E + M A +
Sbjct: 73 QQFKDDVLLVFRNAMTYNPEGHDVHVMAKTLKVLFEGKWSQNE-----GIIMDAYNNAGS 127
Query: 325 DMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIID 384
T+++ G +++ + P MT EEKR LS + L + S++
Sbjct: 128 ASESTKSKAG----------SEDSSLDNVP----MTYEEKRELSASMNKLPGKRLASVVS 173
Query: 385 FLKEHSAG---ETGE--DELEIDIDALSDDTLFALRKL 417
F+ E ++ ++G+ DELE+DID L + TL L ++
Sbjct: 174 FIHEKNSKILMQSGDDPDELEVDIDKLDNATLRQLERI 211
>gi|350539095|ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186134|emb|CAC33449.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186138|emb|CAC33451.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 133/252 (52%), Gaps = 29/252 (11%)
Query: 66 TASEDSCAPKRKCI--SLNIDGYDNFG--VPLQVLTLSKMSQTERRSLELKLKTDLEQVR 121
TAS+D+ + ++ I + N+DG NFG + V++ +K E RS +L ++EQ+R
Sbjct: 68 TASDDAYSFNQRPIESTTNVDGL-NFGGYLTFNVVSYNKAEVNELRS---RLMAEVEQIR 123
Query: 122 VLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNG---RNG 178
L+ ++ S + S G KRP + G S L K+ PNG RN
Sbjct: 124 NLKDRIESGQLSTTNPRSQGKSKKQSGNKRP---TPSGSSKDL-----KKLPNGVENRNF 175
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
GN G ++ K G S +MK+C +L +LM H+ GW+FN PVD L + D
Sbjct: 176 -----GNPGGVDGVKAIGTES-----MMKECRQILAKLMKHKNGWIFNIPVDAEALGLHD 225
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y +IK PMDLGT+K + Y P FAADVRLTF+NA+ YNP + V+ A+ L
Sbjct: 226 YHQIIKRPMDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNAFAEQLLGR 285
Query: 299 FEVRWKAIEKKL 310
FE ++ ++ K+
Sbjct: 286 FEDMFRPLQDKM 297
>gi|15810439|gb|AAL07107.1| unknown protein [Arabidopsis thaliana]
Length = 487
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 109/212 (51%), Gaps = 35/212 (16%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLE 155
++LS +S+ E R+L+ KLK++L++VR L K+ D + P
Sbjct: 58 ISLSSISKLEVRNLKRKLKSELDEVRSLIKRF-------------------DPEANP--- 95
Query: 156 SVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR 215
GG G+ + + K GN G KK A + K C +LLT+
Sbjct: 96 --GGSMAKSGVVGRSK--------KVKTGNGG---GKKSGHGADKGTVQIFKNCNSLLTK 142
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
LM H+ WVFN PVD L + DY ++K PMDLGT+K K+ Y PL FA DVRLTF
Sbjct: 143 LMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKIKLGKSLYKSPLDFAEDVRLTF 202
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
+NA+ YNP +DV+ A+ L FE +W +IE
Sbjct: 203 NNAILYNPIGHDVYRFAELLLNMFEDKWVSIE 234
>gi|18394534|ref|NP_564037.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|75151921|sp|Q8H1D7.1|GTE5_ARATH RecName: Full=Transcription factor GTE5, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE5; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E5;
Flags: Precursor
gi|23297757|gb|AAN13019.1| unknown protein [Arabidopsis thaliana]
gi|332191516|gb|AEE29637.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 487
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 109/212 (51%), Gaps = 35/212 (16%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLE 155
++LS +S+ E R+L+ KLK++L++VR L K+ D + P
Sbjct: 58 ISLSSISKLEVRNLKRKLKSELDEVRSLIKRF-------------------DPEANP--- 95
Query: 156 SVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR 215
GG G+ + + K GN G KK A + K C +LLT+
Sbjct: 96 --GGSMAKSGVVGRSK--------KVKTGNGG---GKKSGHGADKGTVQIFKNCNSLLTK 142
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
LM H+ WVFN PVD L + DY ++K PMDLGT+K K+ Y PL FA DVRLTF
Sbjct: 143 LMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTF 202
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
+NA+ YNP +DV+ A+ L FE +W +IE
Sbjct: 203 NNAILYNPIGHDVYRFAELLLNMFEDKWVSIE 234
>gi|57282318|emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
benthamiana]
Length = 613
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 133/250 (53%), Gaps = 25/250 (10%)
Query: 66 TASEDSCAPKRKCI--SLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVL 123
TAS+D+ + ++ I S N+DG + G ++ S+TE L +L +LEQ+R L
Sbjct: 68 TASDDAYSFNQRPIESSANVDGLNLGG--YMTYNVASYSKTELHDLRSRLVAELEQIRNL 125
Query: 124 QKKVAS--LSSNVVLSPSSDIRSCN-DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQ 180
+ ++ S LS++ +P S +S G KRP + G S K K+ PNG +
Sbjct: 126 KDRIESGQLSTS---NPRSHGKSKKLSGNKRP---TPSGSS-----KDPKKLPNGVD--- 171
Query: 181 TKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYF 240
N P +MK+C +L +LM H+ GW+FNTPVD L + DY
Sbjct: 172 ----NRNFGNPGGGGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYR 227
Query: 241 TVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
+IK PMDLGT+K +++ Y P FAADVRLTF+NA+ YNP + VH+ A+ L FE
Sbjct: 228 QIIKRPMDLGTVKSNLSNNLYPTPFEFAADVRLTFNNALLYNPKTDQVHVFAELLLTRFE 287
Query: 301 VRWKAIEKKL 310
++ + KL
Sbjct: 288 DMFRPFQDKL 297
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 35/194 (18%)
Query: 317 TAVPSRADDMIETETRMG--MPPMKKKKVSPKETKIKA-EPVRRVMTNEEKRILSTELEA 373
T P RA + ++ + +PPM+K + K +A +P +R M+ EEK L L++
Sbjct: 379 TPSPVRAPPAAKPQSSVAAKVPPMEK------QPKPRAKDPNKREMSMEEKHKLGVGLQS 432
Query: 374 LLEE-LPE--SIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQK 428
L +E +P+ II EH A + DE+E+DI+AL +TL+ L + + ++ ++ K ++
Sbjct: 433 LPQEKMPQLVQIIRKRNEHLAQDG--DEIELDIEALDTETLWELDRFVTNWKKMVSKTKR 490
Query: 429 QA---NPGP---------------CEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGND 470
QA N G E + + S ++S + KG D ++ D+ +D
Sbjct: 491 QALINNLGQPPSASAAASAATTSVAEADGPSTSEKNDSFKKPKKGGD-AGDEDDVEIEDD 549
Query: 471 PPVTDIPPVAIEKD 484
P T PPV I+KD
Sbjct: 550 EPATQFPPVEIDKD 563
>gi|9665057|gb|AAF97259.1|AC034106_2 Contains similarity to female sterile homeotic-related protein
Frg-1 from Mus musculus gb|AF045462 and contains a
bromodomain PF|00439 [Arabidopsis thaliana]
Length = 440
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 109/212 (51%), Gaps = 35/212 (16%)
Query: 96 LTLSKMSQTERRSLELKLKTDLEQVRVLQKKVASLSSNVVLSPSSDIRSCNDGQKRPLLE 155
++LS +S+ E R+L+ KLK++L++VR L K+ D + P
Sbjct: 58 ISLSSISKLEVRNLKRKLKSELDEVRSLIKRF-------------------DPEANP--- 95
Query: 156 SVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR 215
GG G+ + + K GN G KK A + K C +LLT+
Sbjct: 96 --GGSMAKSGVVGRSK--------KVKTGNGG---GKKSGHGADKGTVQIFKNCNSLLTK 142
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
LM H+ WVFN PVD L + DY ++K PMDLGT+K K+ Y PL FA DVRLTF
Sbjct: 143 LMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTF 202
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
+NA+ YNP +DV+ A+ L FE +W +IE
Sbjct: 203 NNAILYNPIGHDVYRFAELLLNMFEDKWVSIE 234
>gi|57282316|emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
benthamiana]
Length = 615
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 30/265 (11%)
Query: 56 GSSGRVDTE-----MTASEDSCAPKRKCI--SLNIDGYDNFGVPLQVLTLSKMSQTERRS 108
S+GR + E TAS+D+ + ++ I S N+DG + G ++ ++TE
Sbjct: 53 ASNGRQNDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGG--YMTYNVASYNKTELHE 110
Query: 109 LELKLKTDLEQVRVLQKKVAS--LSSNVVLSPSSDIRSCN-DGQKRPLLESVGGPSVVLA 165
L +L +LEQ+R L+ ++ S LS++ +P S +S G KR + G S
Sbjct: 111 LRSRLVAELEQIRSLKDRIESGQLSTS---NPRSHGKSKKLSGNKR---ATPSGSS---- 160
Query: 166 PKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVF 225
K K+ PNG + N P +MK+C +L +LM H+ GW+F
Sbjct: 161 -KDPKKLPNGVD-------NRNFGNPGGVGVKGIIGMENMMKECRQVLGKLMKHKSGWIF 212
Query: 226 NTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQ 285
NTPVD L + DY +IK PMDLGT+K +++ Y P FAADVRLTF+NA+ YNP
Sbjct: 213 NTPVDAEALGLHDYHQIIKRPMDLGTVKSNLSNCFYPTPFEFAADVRLTFNNALLYNPKT 272
Query: 286 NDVHIMADTLRKYFEVRWKAIEKKL 310
+ VH A+ L FE ++ I+ KL
Sbjct: 273 DQVHGFAEQLLARFEDMFRPIQDKL 297
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 322 RADDMIETETRMGMPPMKK------KKVSP--KETKIKA-EPVRRVMTNEEKRILSTELE 372
R ++ T + + PP K KV P K+ K +A +P +R M+ EEK L L+
Sbjct: 370 RQQSLLSTPSPVRAPPAPKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQ 429
Query: 373 ALLEE-LPE--SIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQ 427
+L +E +P+ II EH A + DE+E+DI+AL +TL+ L + + ++ ++ K +
Sbjct: 430 SLPQEKMPQLVQIIRKRNEHLAQDG--DEIELDIEALDTETLWELDRFVTNWKKMVSKTK 487
Query: 428 KQA 430
+QA
Sbjct: 488 RQA 490
>gi|242077236|ref|XP_002448554.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
gi|241939737|gb|EES12882.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
Length = 458
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 156/316 (49%), Gaps = 45/316 (14%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C +LTRL + FN PV+V +L + DY TVIK PMDLGT+K + +G+Y+
Sbjct: 115 MRKRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHTVIKRPMDLGTVKEGLAAGRYASH 174
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL------------PV 312
FAADVRLTF+NA+ YNP ++VH A L YFE +K PV
Sbjct: 175 DDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALANFEEECRSLEPPPRPV 234
Query: 313 TVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELE 372
V++ P+ + + R G M+K K EP +R M+ EEK +L LE
Sbjct: 235 AVELPPPPAAEPVEAKVKPRAGNVRMRKPKAR--------EPNKREMSLEEKNMLRIGLE 286
Query: 373 ALLEELPESIIDFL-KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQ 429
+L EE +++ + K ++ E DE+E+DID + +T + L + + ++ L+K Q+
Sbjct: 287 SLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFVTNFNKALKKSQRA 346
Query: 430 A--NPGPCEME------------------VLNESGLSNSSMQLCKGNDLVDEDVDIVGGN 469
A N G ++ V N+ S ++ + VDE VDI G+
Sbjct: 347 AMMNGGAADVTSAAVAEDDTAPVGDVPALVDNDDAESEKPVKSTAMAEQVDEYVDI--GD 404
Query: 470 DPPVTDIPPVAIEKDA 485
+ P + IEKDA
Sbjct: 405 EMPTATYQSMEIEKDA 420
>gi|328865269|gb|EGG13655.1| bromodomain-containing protein [Dictyostelium fasciculatum]
Length = 1155
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 148/302 (49%), Gaps = 40/302 (13%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
MK+C ++L L +HQ + F PVD + L I DYF V+KHPMD GTI+ + SG Y +
Sbjct: 453 MKRCFDILETLSNHQHSYPFLAPVDPVALGILDYFDVVKHPMDFGTIRNLLLSGVYQEME 512
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV-TVDMTAVPSRAD 324
FA D RL FSNA YNPP N VHIMA TL FE ++ ++ + T + + R
Sbjct: 513 EFAIDCRLVFSNAKDYNPPNNPVHIMAITLEDIFERKYSKLQNTPNLETAEEVSEEERIK 572
Query: 325 DMIETETRMG--MPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESI 382
+ E M + MK++ PK+ + MT EEK L T + L E +
Sbjct: 573 KLTEENKHMQKELEKMKRESRKPKQPQ---------MTLEEKTQLGTNISFLPPERLRDL 623
Query: 383 IDFLKEHSAGETGEDELEIDIDALSDDTL-------FALRKLLDDYLLEKQQKQANPGPC 435
I + H+ T +DE+ ID++ L + TL F+ + +DY + +QK+
Sbjct: 624 ISIV-SHTLPNTAQDEIVIDLEKLDNSTLRKMEQFVFSCLREQEDYGNDIKQKEIESVTK 682
Query: 436 EMEVLNE------------SGLSNSSMQLCKGNDLVDEDVDIVGGNDPPVTDIPPVAIEK 483
++ ++N S + M L K D++ +DV++ + PPV IEK
Sbjct: 683 QLNMVNRGLRHKKNISKPISKATGRKMALRKEEDVIVDDVEM--------KEYPPVIIEK 734
Query: 484 DA 485
D+
Sbjct: 735 DS 736
>gi|281209232|gb|EFA83405.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
Length = 1172
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 116/238 (48%), Gaps = 22/238 (9%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
MK+C +L LM+HQ G+ F PVD + LNI DYFT IKHPMD GTI+ + G Y P
Sbjct: 532 MKRCLEILDFLMNHQMGYPFLVPVDPIALNILDYFTYIKHPMDFGTIRNSLLDGVYEAPD 591
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKLPVTVDMTAVPSRAD 324
FAAD RL FSNA YNPP N VHIMA TL FE ++ KA+ A P +
Sbjct: 592 EFAADCRLVFSNARLYNPPANQVHIMAKTLEDLFEKKYAKAL-----------AEPPSPE 640
Query: 325 DMIETETRMGMPPMKKKKVSPKETKIKAEPV----------RRVMTNEEKRILSTELEAL 374
E ++ M+ K ++ + K+K E R MT +EK L + AL
Sbjct: 641 IQPEESEKIKRLTMEMKTMTKELEKMKKESTGGGRGRYREAARPMTLDEKTHLGAAINAL 700
Query: 375 LEELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANP 432
+I + T ++E+EID++ L TL L + + Q Q P
Sbjct: 701 HPSNLPKLIQVISHTLDQNTAQEEIEIDLEKLDTGTLRRLEQFVISCFQPGQYHQFQP 758
>gi|326492620|dbj|BAJ90166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 79/128 (61%), Gaps = 6/128 (4%)
Query: 198 ASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT 257
A S NA + C N+L +LM H GW+F+ PVD IPDYF VI++PMDLGT+K K+T
Sbjct: 73 AGSMNASKTRVCRNILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLT 132
Query: 258 SGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL------P 311
+ Y FAADVRLTFSNAMTYNPP N VH +A+ L F W + E+K P
Sbjct: 133 NKSYLSTDDFAADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEWTSYERKWIDRNLKP 192
Query: 312 VTVDMTAV 319
V + M +
Sbjct: 193 VQLPMKVI 200
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 106/163 (65%), Gaps = 15/163 (9%)
Query: 591 VSPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKLRIEREELERRHREEKARLQA 649
+SP K RAA+L+ RFA TI+KA++KAL + G++ DP KL++E+E LE+R +EEK R++A
Sbjct: 325 LSPTKALRAAMLKRRFAGTIVKAQQKALLDHGQQIDPAKLKLEKERLEKRQQEEKERIEA 384
Query: 650 EAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRIA 709
+ KAAE A + E E ++KRE EREAAR AL MM+KTVDI +NS F++DLE +
Sbjct: 385 QVKAAEAAAQYKLDE---ELRKKREREREAARLALHMMKKTVDI-DNSDFLKDLENISKK 440
Query: 710 QDEQLPSFTAEASPD--HLQDRLGSFKFQGSTNPLEQLGLYMK 750
+ P+ D L LGS PLE+LGL+MK
Sbjct: 441 WELNPPAKLIVDFVDGMELPPGLGS--------PLERLGLFMK 475
>gi|224056555|ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
gi|222846166|gb|EEE83713.1| global transcription factor group [Populus trichocarpa]
Length = 411
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 69/105 (65%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L+ C LL +LM HQ+GWVFN PVD KL + DY+ +IKHPMDLGT+K +++ Y P
Sbjct: 31 LVIGCGELLGKLMKHQYGWVFNEPVDAKKLKLHDYYKIIKHPMDLGTVKSRLSKNWYKSP 90
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
FA DVRLTF+NAM YN DVH MAD L K FE W + K
Sbjct: 91 KEFAEDVRLTFNNAMKYNEKGQDVHAMADKLLKIFEENWANFKAK 135
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 351 KAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDD 409
K E VR VMT EEK+ LS L++L E ES++ +++ + G EDE+E+DID+ ++
Sbjct: 245 KNETVRGVMTYEEKQKLSIHLQSLPSEKLESVVQIIRKRNPGLFQQEDEIEVDIDSFDNE 304
Query: 410 TLFALRKLLDDY 421
TL+ L + +Y
Sbjct: 305 TLWELHGYVTNY 316
>gi|413919577|gb|AFW59509.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 156/315 (49%), Gaps = 44/315 (13%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C +L+RL + FN PV+V +L + DY VIK PMDLGT+K + +G+Y+
Sbjct: 105 MRKRCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASH 164
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-----------KAIEKKLPVT 313
FAADVRLTF+NA+ YNP ++VH A L YFE + K +E PV
Sbjct: 165 DDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKRLEPPRPVA 224
Query: 314 VDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEA 373
++ P+ + +TR G M+K K EP +R M+ EEK +L L +
Sbjct: 225 AELPPPPAVEPVEAKAKTRAGNVRMRKPKAR--------EPNKREMSLEEKNMLRLGLVS 276
Query: 374 LLEELPESIIDFL-KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA 430
L EE +++ + K ++ E DE+E+DID + +T + L + + ++ L+K Q+ A
Sbjct: 277 LPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFVTNFNKALKKSQRAA 336
Query: 431 --NPGPCEME------------------VLNESGLSNSSMQLCKGNDLVDEDVDIVGGND 470
N G ++ V N+ S ++ + VDE VDI G++
Sbjct: 337 MLNGGVADVTSTAVAEDDTAPVGDVPTLVGNDDAESEEPVKSTTVAEQVDEYVDI--GDE 394
Query: 471 PPVTDIPPVAIEKDA 485
P + IEKDA
Sbjct: 395 MPAATYQSMEIEKDA 409
>gi|413925460|gb|AFW65392.1| hypothetical protein ZEAMMB73_923875 [Zea mays]
Length = 613
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 79/114 (69%)
Query: 197 AASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
AAS ++ +++ C N++ +L+ H+ GW+F PVD IPDYF VI++PMDLGT+K K+
Sbjct: 54 AASMKSSRMIRLCGNIVRKLIDHKGGWLFKDPVDPDLYKIPDYFDVIRNPMDLGTVKNKL 113
Query: 257 TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
T +Y FAADVRLTFSNAM YNPP NDVH A L + F+ W+++E+K
Sbjct: 114 TKKKYVSIEEFAADVRLTFSNAMKYNPPGNDVHAFARELNEIFDSEWESVERKF 167
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 113/184 (61%), Gaps = 17/184 (9%)
Query: 571 PVAIVADGHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKL 629
P+A G ES + +SP + RAA+LR+RFA TI+KA++KAL + G+ DP KL
Sbjct: 313 PIASSVQGE---ESYLCDEPLSPSRALRAAMLRSRFAGTIVKAQQKALLDHGKNIDPVKL 369
Query: 630 RIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEK 689
++E+E LE+R +EEKAR++A+ KAAE A ++ E E + KRE EREAAR A++MM+K
Sbjct: 370 QLEKERLEKRQQEEKARIEAQVKAAEAAAQQKFEE---EMRVKREQEREAARLAVRMMKK 426
Query: 690 TVDINENSRFMEDLEMLRIAQDEQLPS-FTAEASPDHLQDRLGSFKFQGSTNPLEQLGLY 748
TVDI +NS F+++LE P + L LGS PLE+LGL+
Sbjct: 427 TVDI-DNSDFLKELENFSKTWQSNPPGKLIVDFIDGDLPPGLGS--------PLERLGLF 477
Query: 749 MKMD 752
MK D
Sbjct: 478 MKND 481
>gi|226530258|ref|NP_001151218.1| bromodomain containing protein [Zea mays]
gi|195645110|gb|ACG42023.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 156/315 (49%), Gaps = 44/315 (13%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C +L+RL + FN PV+V +L + DY VIK PMDLGT+K + +G+Y+
Sbjct: 105 MRKRCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASH 164
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA-----------IEKKLPVT 313
FAADVRLTF+NA+ YNP ++VH A L YFE +K +E PV
Sbjct: 165 DDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKRLEPPRPVA 224
Query: 314 VDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEA 373
++ P+ + +TR G M+K K EP +R M+ EEK +L L +
Sbjct: 225 AELPPPPAVEPVEAKAKTRAGNVRMRKPKAR--------EPNKREMSLEEKNMLRLGLVS 276
Query: 374 LLEELPESIIDFL-KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA 430
L EE +++ + K ++ E DE+E+DID + +T + L + + ++ L+K Q+ A
Sbjct: 277 LPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFVTNFNKALKKSQRAA 336
Query: 431 --NPGPCEME------------------VLNESGLSNSSMQLCKGNDLVDEDVDIVGGND 470
N G ++ V N+ S ++ + VDE VDI G++
Sbjct: 337 MLNGGVADVTSTAVAEDDTAPVGDVPTLVGNDDAESEEPVKSTTVAEQVDEYVDI--GDE 394
Query: 471 PPVTDIPPVAIEKDA 485
P + IEKDA
Sbjct: 395 MPAATNQSMEIEKDA 409
>gi|30694987|ref|NP_199467.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|327488241|sp|Q9LS28.2|GTE12_ARATH RecName: Full=Transcription factor GTE12; AltName:
Full=Bromodomain-containing protein GTE12; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12
gi|26451383|dbj|BAC42791.1| unknown protein [Arabidopsis thaliana]
gi|332008014|gb|AED95397.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 494
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
QC LL LM H+ GW+F PVD +K+ IPDYF VI+ PMDLGT+K K+ YS+ F
Sbjct: 72 QCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEF 131
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
AADVRLTF+NAM YNP N+VH +A + + FEVRW+++ KK
Sbjct: 132 AADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 173
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 8/108 (7%)
Query: 591 VSPDKLYRAALLRNRFADTILKAREK-ALEKGEKRDPEKLRIEREELERRHREEKARLQA 649
V P+K RAA+L+ ++A TI+KA+ + L + K D +++IE+E++ER REEKAR++A
Sbjct: 333 VPPEKALRAAILKAQYAGTIIKAKHRIVLGQNNKADLIRIQIEKEQMERAQREEKARIEA 392
Query: 650 EAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENS 697
E +AA+ A R A E K+K RE+ R + M+K D N+
Sbjct: 393 EMRAAKVAER---MRAQDELKQK----RESQRLEIAKMKKGFDFERNN 433
>gi|8885596|dbj|BAA97526.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
QC LL LM H+ GW+F PVD +K+ IPDYF VI+ PMDLGT+K K+ YS+ F
Sbjct: 84 QCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEF 143
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
AADVRLTF+NAM YNP N+VH +A + + FEVRW+++ KK
Sbjct: 144 AADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 185
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 8/121 (6%)
Query: 578 GHHEGESAPSERQVSPDKLYRAALLRNRFADTILKAREK-ALEKGEKRDPEKLRIEREEL 636
G+ + P+ V P+K RAA+L+ ++A TI+KA+ + L + K D +++IE+E++
Sbjct: 332 GNELKTAFPALPPVPPEKALRAAILKAQYAGTIIKAKHRIVLGQNNKADLIRIQIEKEQM 391
Query: 637 ERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINEN 696
ER REEKAR++AE +AA+ A R A E K+K RE+ R + M+K D N
Sbjct: 392 ERAQREEKARIEAEMRAAKVAER---MRAQDELKQK----RESQRLEIAKMKKGFDFERN 444
Query: 697 S 697
+
Sbjct: 445 N 445
>gi|57282322|emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
Length = 616
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 136/265 (51%), Gaps = 30/265 (11%)
Query: 56 GSSGRVDTE-----MTASEDSCAPKRKCI--SLNIDGYDNFGVPLQVLTLSKMSQTERRS 108
S+GR+ E TAS+D+ + ++ I S N+DG + G + ++TE
Sbjct: 53 ASNGRLTDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGG--YMTYNXASYNKTELHE 110
Query: 109 LELKLKTDLEQVRVLQKKVAS--LSSNVVLSPSSDIRSCN-DGQKRPLLESVGGPSVVLA 165
L +L +LEQ+R L+ ++ S LS++ +P S +S G KRP + G S
Sbjct: 111 LRSRLVAELEQIRNLKDRIESGQLSTS---NPRSHGKSKKLSGNKRP---TPSGSS---- 160
Query: 166 PKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVF 225
K K+ PNG + N P +MK+C +L +LM H+ GW+F
Sbjct: 161 -KDPKKLPNGVD-------NRNFGNPGGGGVKGIIGKENMMKECTQVLGKLMKHKSGWIF 212
Query: 226 NTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQ 285
NTPVD L + DY +IK P DLGT K +++ Y P FAADVRLTF+NA+ YNP
Sbjct: 213 NTPVDAEALGLHDYHQIIKRPXDLGTXKSNLSNNFYPTPFEFAADVRLTFNNALLYNPKT 272
Query: 286 NDVHIMADTLRKYFEVRWKAIEKKL 310
+ VH A+ L FE ++ I+ KL
Sbjct: 273 DQVHGFAEQLLARFEDMFRPIQDKL 297
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 16/123 (13%)
Query: 322 RADDMIETETRMGMPPMKK------KKVSP--KETKIKA-EPVRRVMTNEEKRILSTELE 372
R + T + + PP K KV P K+ K +A +P +R M+ EEK L L+
Sbjct: 372 RQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQ 431
Query: 373 ALLEE-LPE--SIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQ 427
+L +E +P+ II EH A + DE+E+DI+AL +TL+ L + + ++ ++ K +
Sbjct: 432 SLPQEKMPQLVQIIRKRNEHLAQDG--DEIELDIEALDTETLWELDRFVTNWKKMVSKTK 489
Query: 428 KQA 430
+QA
Sbjct: 490 RQA 492
>gi|449433591|ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
gi|449523269|ref|XP_004168646.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
Length = 569
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 68/97 (70%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
+QC ++L LM+H+FGWVFN PVD + L IPDYF++I PMDLGT+K K+ Y
Sbjct: 109 QQCSSILKTLMTHRFGWVFNQPVDPVALKIPDYFSIITDPMDLGTVKSKLERNLYQASEE 168
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
FAAD+RLTFSNAM YNP N VH MA L + FE +W
Sbjct: 169 FAADIRLTFSNAMLYNPSGNHVHKMAKELLENFEKKW 205
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 31/209 (14%)
Query: 565 LNSQGKP-----VAIVADGHHEGESAPS-ERQVSPDKLYRAALLRNRFADTILKAREKAL 618
L +GKP +A A+ E S P + Q+SP K RAA+L++RFA+TILKA++K L
Sbjct: 364 LEDEGKPPYDQSLARGANSTSEVCSTPVFDVQLSPKKALRAAMLKSRFAETILKAQQKTL 423
Query: 619 -EKGEKRDPEKLRIEREELERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELER 677
+ G+K D K++ E+E LER+ REE+ R++A+ KAA+ A R +A AE K++RE +R
Sbjct: 424 LDLGDKVDQLKIQQEKERLERKQREERERIEAQIKAADMALR---LKAEAEKKQQRERDR 480
Query: 678 EAARQALQMMEKTVDINENSRFMEDLE-----MLRIAQDEQLPSFTAEASPDHLQDRLGS 732
EAAR ALQ +E+TVD+++N +++LE L I + + S D Q
Sbjct: 481 EAARIALQKIERTVDLDQNLEILKELEKLCGGFLFIQHHRAM----VKRSLDDCQ----- 531
Query: 733 FKFQGSTNPLEQLGLYMK--MDDDDEEEV 759
NPLE+LGL++K DDDEE +
Sbjct: 532 -----LENPLERLGLFIKDEFLDDDEETI 555
>gi|57282320|emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 33/267 (12%)
Query: 56 GSSGRVDTE-----MTASEDSCAPKRKCI--SLNIDGYDNFGVPLQVLTLSKMSQTERRS 108
S+GR + E TAS+D+ + ++ I S N+DG + G ++ ++TE
Sbjct: 53 ASNGRHNDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGG--YMTYNVASYNKTELHE 110
Query: 109 LELKLKTDLEQVRVLQKKVAS--LSSNVVLSPSSDIRSCN-DGQKRPLLESVGGPSVVLA 165
L +L +LEQ+R L+ ++ S LS++ +P S +S G KRP + G S
Sbjct: 111 LRSRLVAELEQIRNLKDRIESGQLSTS---NPRSHGKSKKLSGNKRP---TPSGSS---- 160
Query: 166 PKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAM--LMKQCENLLTRLMSHQFGW 223
K +K+ NG + + G M +MK+C +L +LM H+ GW
Sbjct: 161 -KDRKKLLNGVD--------NRNFGNPGGGGGVKGIIGMENMMKECRQVLAKLMKHKSGW 211
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNP 283
+FNTPVD + + DY +IK PMDLGT+K + + Y P FAADVRLTF+NA+ YNP
Sbjct: 212 IFNTPVDAKAMGLHDYHQIIKRPMDLGTVKSNLINNFYPTPFEFAADVRLTFNNALLYNP 271
Query: 284 PQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ VH A+ L FE ++ I+ KL
Sbjct: 272 KTDQVHGFAEQLLARFEDMFRPIQDKL 298
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 16/123 (13%)
Query: 322 RADDMIETETRMGMPPMKK------KKVSP--KETKIKA-EPVRRVMTNEEKRILSTELE 372
R + T + + PP K KV P K+ K +A +P +R M+ EEK L L+
Sbjct: 373 RQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQ 432
Query: 373 ALLEE-LPE--SIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQ 427
+L +E +P+ II EH A + DE+E+DI+AL +TL+ L + + ++ ++ K +
Sbjct: 433 SLPQEKMPQLVQIIRKRNEHLAQDG--DEIELDIEALDTETLWELDRFVTNWKKMVSKTK 490
Query: 428 KQA 430
+QA
Sbjct: 491 RQA 493
>gi|326494522|dbj|BAJ94380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 79/128 (61%), Gaps = 6/128 (4%)
Query: 198 ASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT 257
A S NA + C N+L +LM H GW+F+ PVD IPDYF VI++PMDLGT+K K+T
Sbjct: 73 AGSMNASKTRVCRNILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLT 132
Query: 258 SGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL------P 311
+ Y FAADVRLTFSNAMTYNPP N VH +A+ L F W + E+K P
Sbjct: 133 NKSYLSTDDFAADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEWTSYERKWIDRNLKP 192
Query: 312 VTVDMTAV 319
V + M +
Sbjct: 193 VQLPMKVI 200
>gi|297797597|ref|XP_002866683.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
gi|297312518|gb|EFH42942.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 119/239 (49%), Gaps = 19/239 (7%)
Query: 76 RKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS----LS 131
R S D FG ++ + + R L+ + ++LEQ+R+L++++ S
Sbjct: 51 RSNSSKQFDDSSEFG-SYATFNIAGYTSNQLRELKKRFTSELEQIRILRERIESGTFETQ 109
Query: 132 SNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEP 191
+ +RS L S G L PK KK+ N K+GN +
Sbjct: 110 QAYTIPEVPAVRSAP-------LNSFAGEKNDLGPKKKKQKKNVSG---LKRGN--QFAT 157
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGT 251
P + A ++ C +L +LM H++ WVFNTPVDV+ L + DY V+K PMDLGT
Sbjct: 158 SDPE--SEKLLAGMLNTCGQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGT 215
Query: 252 IKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
+K + G Y P+ FA DVRLTF+NAMTYNP DV+ MAD L +F+ + KK
Sbjct: 216 VKLNLDKGFYVSPIDFATDVRLTFNNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKF 274
>gi|226493082|ref|NP_001142377.1| hypothetical protein [Zea mays]
gi|194708534|gb|ACF88351.1| unknown [Zea mays]
gi|414585390|tpg|DAA35961.1| TPA: hypothetical protein ZEAMMB73_681303 [Zea mays]
Length = 451
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 153/308 (49%), Gaps = 34/308 (11%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+C +LTRL + FN PV+V +L + DY VIK PMDLGT+K + +G+Y+
Sbjct: 111 KRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDD 170
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDM 326
FAADVRLTF+NA+ YNP ++VH A L YFE +K E D
Sbjct: 171 FAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYK--EALACFEEDCKRPEPPRPVP 228
Query: 327 IETETRMGMPPMKKKKVSPKETKIKA------EPVRRVMTNEEKRILSTELEALLEELPE 380
E P+ + KV P+ ++ EP +R M+ EEK +L LE+L EE
Sbjct: 229 PELTPPPAAEPV-EAKVKPRAGNVRMRKPKAREPNKREMSLEEKNMLRVGLESLPEEKMH 287
Query: 381 SIIDFL-KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA--NPGPC 435
+++ + K ++ E DE+E+DID + +T + L + + ++ L+K Q+ N G
Sbjct: 288 NVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFVANFNKALKKSQRAVVMNGGAA 347
Query: 436 EMEVL----NESGLSNSSMQLCKGNDL--------------VDEDVDIVGGNDPPVTDIP 477
++ N++ ++ + L +D+ VDE VDI G++ P
Sbjct: 348 DVTSAAVAENDTAPVSNVLTLVDNDDVEREKPVRSATMAEQVDEYVDI--GDEMPTATYQ 405
Query: 478 PVAIEKDA 485
+ IEKDA
Sbjct: 406 SMEIEKDA 413
>gi|389608049|dbj|BAM17630.1| putative RING3 protein [Oryza sativa Indica Group]
Length = 456
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 50/350 (14%)
Query: 171 RAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVD 230
R + G + G+ R P PA A + K+CE +L +L + FN PV+
Sbjct: 90 RIDTWQQGQVKRHGSPRRDLPTPPA----KLRAAMRKRCEQILAKLRKDKRSIWFNAPVE 145
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
V +L + DY VIK PMDLGT++ + +G+YS FAADVRLTFSNA+ YNP ++VH
Sbjct: 146 VDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNPAGHEVHT 205
Query: 291 MADTLRKYFEVRWKA----IEKKL----PVTVDMTAVPSRADDMIETETRMGMPPMKKKK 342
A L FE +KA E++L P A + + R G M+K K
Sbjct: 206 FAGDLLASFEKMYKAFMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGNVKMRKPK 265
Query: 343 VSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEI 401
EP +R MT EEK +L LE+L EE +++ +++ + E E+E+
Sbjct: 266 AR--------EPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIEL 317
Query: 402 DIDALSDDTLFALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGL--SNSSMQL 452
DID + +T + L + ++++ L K ++ A N + V N+S + + S+ +
Sbjct: 318 DIDEMDVETQWELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATM 377
Query: 453 CKGNDL------------------VDEDVDIVGGNDPPVTDIPPVAIEKD 484
D+ +DE VDI G++ P V IEKD
Sbjct: 378 VDNGDVTMAIESKDPDKITAQAEQLDEYVDI--GDEMPTATYQSVEIEKD 425
>gi|116309747|emb|CAH66790.1| H0215F08.1 [Oryza sativa Indica Group]
gi|116309918|emb|CAH66952.1| B0809H07.7 [Oryza sativa Indica Group]
Length = 456
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 50/350 (14%)
Query: 171 RAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVD 230
R + G + G+ R P PA A + K+CE +L +L + FN PV+
Sbjct: 90 RIDTWQQGQVKRHGSPRRDLPTPPA----KLRAAMRKRCEQILAKLRKDKRSIWFNAPVE 145
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
V +L + DY VIK PMDLGT++ + +G+YS FAADVRLTFSNA+ YNP ++VH
Sbjct: 146 VDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNPAGHEVHT 205
Query: 291 MADTLRKYFEVRWKA----IEKKL----PVTVDMTAVPSRADDMIETETRMGMPPMKKKK 342
A L FE +KA E++L P A + + R G M+K K
Sbjct: 206 FAGDLLASFEKMYKAFMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGNVKMRKPK 265
Query: 343 VSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEI 401
EP +R MT EEK +L LE+L EE +++ +++ + E E+E+
Sbjct: 266 AR--------EPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIEL 317
Query: 402 DIDALSDDTLFALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGL--SNSSMQL 452
DID + +T + L + ++++ L K ++ A N + V N+S + + S+ +
Sbjct: 318 DIDEMDVETQWELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATM 377
Query: 453 CKGNDL------------------VDEDVDIVGGNDPPVTDIPPVAIEKD 484
D+ +DE VDI G++ P V IEKD
Sbjct: 378 VDNGDVTMAIESKDPDKITTQAEQLDEYVDI--GDEMPTATYQSVEIEKD 425
>gi|389608036|dbj|BAM17618.1| putative RING3 protein [Oryza sativa Japonica Group]
Length = 456
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 50/350 (14%)
Query: 171 RAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVD 230
R + G + G+ R P PA A + K+CE +L +L + FN PV+
Sbjct: 90 RIDTWQQGQVKRHGSPRRDLPTPPA----KLRAAMRKRCEQILAKLRKDKRSIWFNAPVE 145
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
V +L + DY VIK PMDLGT++ + +G+YS FAADVRLTFSNA+ YNP ++VH
Sbjct: 146 VDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNPAGHEVHT 205
Query: 291 MADTLRKYFEVRWKA----IEKKL----PVTVDMTAVPSRADDMIETETRMGMPPMKKKK 342
A L FE +KA E++L P A + + R G M+K K
Sbjct: 206 FAGDLLASFEKMYKACMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGNVKMRKPK 265
Query: 343 VSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEI 401
EP +R MT EEK +L LE+L EE +++ +++ + E E+E+
Sbjct: 266 AR--------EPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIEL 317
Query: 402 DIDALSDDTLFALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGL--SNSSMQL 452
DID + +T + L + ++++ L K ++ A N + V N+S + + S+ +
Sbjct: 318 DIDEMDVETQWELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATM 377
Query: 453 CKGNDL------------------VDEDVDIVGGNDPPVTDIPPVAIEKD 484
D+ +DE VDI G++ P V IEKD
Sbjct: 378 VDNGDVTMAIESKDPDKITTQAEQLDEYVDI--GDEMPTATYQSVEIEKD 425
>gi|297789895|ref|XP_002862870.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
gi|297308629|gb|EFH39129.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 118/239 (49%), Gaps = 19/239 (7%)
Query: 76 RKCISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS----LS 131
R S D FG ++ + + R L+ + ++LEQ+R+L++++ S
Sbjct: 51 RSNSSKQFDDSSEFG-SYATFNIAGYTSNQLRELKKRFTSELEQIRILRERIESGTFETQ 109
Query: 132 SNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEP 191
+ +RS L S G L PK KK+ N ++ + E
Sbjct: 110 QAYTIPEVPAVRSAP-------LNSFAGEKNDLGPKKKKQKKNVSGLKRSNQFTDSDPES 162
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGT 251
+K A ++ C +L +LM H++ WVFNTPVDV+ L + DY V+K PMDLGT
Sbjct: 163 EKLL-------AGMLNTCGQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGT 215
Query: 252 IKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
+K + G Y P+ FA DVRLTF+NAMTYNP DV+ MAD L +F+ + KK
Sbjct: 216 VKLNLDKGFYVSPIDFATDVRLTFNNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKF 274
>gi|42568797|ref|NP_201366.3| global transcription factor group E7 [Arabidopsis thaliana]
gi|75146221|sp|Q7Y214.1|GTE7_ARATH RecName: Full=Transcription factor GTE7; AltName:
Full=Bromodomain-containing protein GTE7; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E7
gi|30793995|gb|AAP40447.1| unknown protein [Arabidopsis thaliana]
gi|110742049|dbj|BAE98957.1| hypothetical protein [Arabidopsis thaliana]
gi|133778882|gb|ABO38781.1| At5g65630 [Arabidopsis thaliana]
gi|332010696|gb|AED98079.1| global transcription factor group E7 [Arabidopsis thaliana]
Length = 590
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 113/220 (51%), Gaps = 18/220 (8%)
Query: 95 VLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS----LSSNVVLSPSSDIRSCNDGQK 150
L+ + ++ R L+ + ++L+Q+R+L++++ S + +RS
Sbjct: 69 TFNLAGYTSSQLRELKKRFTSELKQIRILRERIESGTFETQQGYTIPEVPAVRSAP---- 124
Query: 151 RPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCE 210
L + G L PK KK+ N + S + P P + A ++ C
Sbjct: 125 ---LNNFTGEKNDLGPKKKKQKKN-----VSGLKRSNQFGPSDPE--SEKLLAGMLNTCS 174
Query: 211 NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAAD 270
+L +LM H++ WVFNTPVDV+ L + DY V+K PMDLGT+K + G Y P+ FA D
Sbjct: 175 QILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATD 234
Query: 271 VRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
VRLTF NAMTYNP DV+ MAD L +F+ + KK
Sbjct: 235 VRLTFDNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKF 274
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 353 EPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTL 411
+P +R+MT EEK L L+ L E ++ L++ + + DE+E+DI+A+ ++TL
Sbjct: 398 DPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETL 457
Query: 412 FALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVD 464
+ L + + +Y + K ++Q + P M + E G S+ + + D +EDVD
Sbjct: 458 WELDRFVTNYKKMASKIKRQGFIRNVSTPPRNMASVAEMG---SAEKRTRRGDAGEEDVD 514
Query: 465 IVGGNDPPVTDIPPVAIEKDAA 486
I G D P+ D P V IE+D
Sbjct: 515 I--GEDIPIEDYPSVEIERDGT 534
>gi|8978291|dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]
Length = 643
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 113/220 (51%), Gaps = 18/220 (8%)
Query: 95 VLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS----LSSNVVLSPSSDIRSCNDGQK 150
L+ + ++ R L+ + ++L+Q+R+L++++ S + +RS
Sbjct: 124 TFNLAGYTSSQLRELKKRFTSELKQIRILRERIESGTFETQQGYTIPEVPAVRSAP---- 179
Query: 151 RPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCE 210
L + G L PK KK+ N + S + P P + A ++ C
Sbjct: 180 ---LNNFTGEKNDLGPKKKKQKKN-----VSGLKRSNQFGPSDPE--SEKLLAGMLNTCS 229
Query: 211 NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAAD 270
+L +LM H++ WVFNTPVDV+ L + DY V+K PMDLGT+K + G Y P+ FA D
Sbjct: 230 QILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATD 289
Query: 271 VRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
VRLTF NAMTYNP DV+ MAD L +F+ + KK
Sbjct: 290 VRLTFDNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKF 329
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 353 EPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTL 411
+P +R+MT EEK L L+ L E ++ L++ + + DE+E+DI+A+ ++TL
Sbjct: 453 DPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETL 512
Query: 412 FALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVD 464
+ L + + +Y + K ++Q + P M + E G S+ + + D +EDVD
Sbjct: 513 WELDRFVTNYKKMASKIKRQGFIRNVSTPPRNMASVAEMG---SAEKRTRRGDAGEEDVD 569
Query: 465 IVGGNDPPVTDIPPVAIEKDAA 486
I G D P+ D P V IE+D
Sbjct: 570 I--GEDIPIEDYPSVEIERDGT 589
>gi|357476123|ref|XP_003608347.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509402|gb|AES90544.1| Bromodomain-containing protein [Medicago truncatula]
Length = 390
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 34/218 (15%)
Query: 95 VLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS--LSSNVVLSPSSDIRSCNDGQKRP 152
+S S++E L T+LEQ+R LQ ++ S L S RS ++G
Sbjct: 68 TFNVSSYSKSELNELRNCFVTELEQIRQLQTRIESGELKS----------RSSHNG---- 113
Query: 153 LLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENL 212
GG + A KK + N R P K+ + E G+A MK C +
Sbjct: 114 -----GGSAKKSA--NKKFSGNKRPFPAEKELKRSKSE----VGSA-------MKACGQI 155
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVR 272
L +LM + GW+F++PVD + LN+ DYF +IKHPMDLGT+K K+ YS P FA DV+
Sbjct: 156 LQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVK 215
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
LTF NA+TYNP +DV+ A L + FE ++ I++K
Sbjct: 216 LTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKF 253
>gi|302834497|ref|XP_002948811.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
gi|300266002|gb|EFJ50191.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
Length = 767
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 114/223 (51%), Gaps = 15/223 (6%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ + C +L LM + VF PVD +K +PDYF I HPMDLGTIK ++ +YSDP
Sbjct: 97 IWRMCGAVLDFLMKKKNAIVFLRPVDPVKDGVPDYFKFICHPMDLGTIKTRLRERKYSDP 156
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA--IEKK---LPVTVDMTAV 319
FAADVRL + N TYN V IM D L + +E +W +E++ L T D +
Sbjct: 157 REFAADVRLVWRNCATYNAVGTPVRIMGDQLSEDWERKWAELNVEQRWDALVATRDPQTI 216
Query: 320 PSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELP 379
P D I + R + + V P A+P R MT EKR LS L L
Sbjct: 217 P--LDQRIASSARQLLQRVNSVHVLP-----DADP-SRTMTTVEKRKLSIALSELQGNQL 268
Query: 380 ESIIDFLKEH--SAGETGEDELEIDIDALSDDTLFALRKLLDD 420
+++ + E+ E+E+E+D+D L + TL+ LR+ D+
Sbjct: 269 ADVLNIIAENLKDINPDDEEEIELDVDQLDNQTLWRLREYCDN 311
>gi|125549798|gb|EAY95620.1| hypothetical protein OsI_17475 [Oryza sativa Indica Group]
Length = 456
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 164/350 (46%), Gaps = 50/350 (14%)
Query: 171 RAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVD 230
R + G + G+ R P PA A + K+CE +L +L + FN PV+
Sbjct: 90 RIDTWQQGQVKRHGSPRRDLPTPPA----KLRAAMRKRCEQILAKLRKDKRSIWFNAPVE 145
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
V +L + DY VIK PMDLGT++ + +G+Y FAADVRLTFSNA+ YNP ++VH
Sbjct: 146 VDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHT 205
Query: 291 MADTLRKYFEVRWKA----IEKKL----PVTVDMTAVPSRADDMIETETRMGMPPMKKKK 342
A L FE +KA E++L P A ++ + R M+K K
Sbjct: 206 FAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQVKPRAANVKMRKPK 265
Query: 343 VSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEI 401
EP +R MT EEK +L LE+L EE +++ +++ + E E+E+
Sbjct: 266 AR--------EPNKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIEL 317
Query: 402 DIDALSDDTLFALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGL--SNSSMQL 452
DID + +T + L + ++++ L K ++ A N + V N+S + + S+ +
Sbjct: 318 DIDEMDVETQWELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATM 377
Query: 453 CKGNDL------------------VDEDVDIVGGNDPPVTDIPPVAIEKD 484
D+ +DE VDI G++ P V IEKD
Sbjct: 378 VDNGDVTMAIESKDPDKITTQAEQLDEYVDI--GDEMPTATYQSVEIEKD 425
>gi|115460642|ref|NP_001053921.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|38344165|emb|CAE03496.2| OSJNBa0053K19.4 [Oryza sativa Japonica Group]
gi|38345713|emb|CAD41835.2| OSJNBb0085C12.15 [Oryza sativa Japonica Group]
gi|113565492|dbj|BAF15835.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|215695153|dbj|BAG90344.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 164/350 (46%), Gaps = 50/350 (14%)
Query: 171 RAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVD 230
R + G + G+ R P PA A + K+CE +L +L + FN PV+
Sbjct: 90 RIDTWQQGQVKRHGSPRRDLPTPPA----KLRAAMRKRCEQILAKLRKDKRSIWFNAPVE 145
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
V +L + DY VIK PMDLGT++ + +G+Y FAADVRLTFSNA+ YNP ++VH
Sbjct: 146 VDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHT 205
Query: 291 MADTLRKYFEVRWKA----IEKKL----PVTVDMTAVPSRADDMIETETRMGMPPMKKKK 342
A L FE +KA E++L P A ++ + R M+K K
Sbjct: 206 FAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQVKPRAANVKMRKPK 265
Query: 343 VSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEI 401
EP +R MT EEK +L LE+L EE +++ +++ + E E+E+
Sbjct: 266 AR--------EPNKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIEL 317
Query: 402 DIDALSDDTLFALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGL--SNSSMQL 452
DID + +T + L + ++++ L K ++ A N + V N+S + + S+ +
Sbjct: 318 DIDEMDVETQWELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATM 377
Query: 453 CKGNDL------------------VDEDVDIVGGNDPPVTDIPPVAIEKD 484
D+ +DE VDI G++ P V IEKD
Sbjct: 378 VDNGDVTMAIESKDPDKITTQAEQLDEYVDI--GDEMPTATYQSVEIEKD 425
>gi|326487788|dbj|BAK05566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 73/113 (64%)
Query: 198 ASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT 257
A S NA + C N+L +LM H GW+F+ VD IPDYF VI++PMDLGT+K K+T
Sbjct: 73 AGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLT 132
Query: 258 SGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ Y FAADVRLTFSNAMTYNPP VH +A+ L F + W + E+K
Sbjct: 133 NKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYERKW 185
>gi|125591685|gb|EAZ32035.1| hypothetical protein OsJ_16213 [Oryza sativa Japonica Group]
Length = 337
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 152/316 (48%), Gaps = 46/316 (14%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+CE +L +L + FN PV+V +L + DY VIK PMDLGT++ + +G+Y
Sbjct: 1 MRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSH 60
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA----IEKKLP----VTVDM 316
FAADVRLTFSNA+ YNP ++VH A L FE +KA E++L
Sbjct: 61 DDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVP 120
Query: 317 TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLE 376
A ++ + R M+K K EP +R MT EEK +L LE+L E
Sbjct: 121 PPELPPATAPVQVKPRAANVKMRKPKAR--------EPNKRDMTLEEKNLLRVGLESLPE 172
Query: 377 ELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA--- 430
E +++ +++ + E E+E+DID + +T + L + ++++ L K ++ A
Sbjct: 173 EKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNKSRRAAIVN 232
Query: 431 --NPGPCEMEVLNESGL--SNSSMQLCKGNDL------------------VDEDVDIVGG 468
N + V N+S + + S+ + D+ +DE VDI G
Sbjct: 233 GENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIESKDPDKITTQAEQLDEYVDI--G 290
Query: 469 NDPPVTDIPPVAIEKD 484
++ P V IEKD
Sbjct: 291 DEMPTATYQSVEIEKD 306
>gi|116309916|emb|CAH66950.1| B0809H07.5 [Oryza sativa Indica Group]
Length = 337
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 152/316 (48%), Gaps = 46/316 (14%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C+ +L +L + FN PV+V +L + DY VIK PMDLGT++ + +G+Y
Sbjct: 1 MRKRCDQILVKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA----IEKKLPV----TVDM 316
FAAD+RLTFSNA+ YNP ++VH A L FE +KA E++L +
Sbjct: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVP 120
Query: 317 TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLE 376
A + + R G M+K K EP +R MT EEK +L LE+L E
Sbjct: 121 PPELPPAKAPAQVKPRAGNVKMRKPKAR--------EPNKREMTLEEKNLLRVGLESLPE 172
Query: 377 ELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA--- 430
E +++ +++ + E E+E+DID + +T + L + ++ + L K ++ A
Sbjct: 173 EKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWKLDRFVNKFKKALNKSRRAAIVN 232
Query: 431 --NPGPCEMEVLNESGL--SNSSMQLCKGNDL------------------VDEDVDIVGG 468
N + V N+S + + S+ + D+ +DE VD+ G
Sbjct: 233 GENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIESKDPDKITTQAEQLDEYVDV--G 290
Query: 469 NDPPVTDIPPVAIEKD 484
++ P V IEKD
Sbjct: 291 DEMPTATYQSVEIEKD 306
>gi|395146565|gb|AFN53717.1| putative bromodomain-containing protein [Linum usitatissimum]
Length = 216
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
+QC LL L+ H +GW+F+ PVD ++LNIPDYFT+I +PMDLGTI K++ +Y
Sbjct: 7 QQCSALLKVLLGHPYGWIFSKPVDPVELNIPDYFTIITNPMDLGTINSKLSKKKYFGAED 66
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
FAADVRLTF+NAM YNPP N VH A L K
Sbjct: 67 FAADVRLTFANAMLYNPPSNSVHTTALELVK 97
>gi|30686240|ref|NP_181036.2| Transcription factor GTE6 [Arabidopsis thaliana]
gi|75148956|sp|Q84XV2.1|GTE1_ARATH RecName: Full=Transcription factor GTE1; AltName:
Full=Bromodomain-containing protein GTE1; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E1;
AltName: Full=Protein IMBIBITION-INDUCIBLE 1
gi|27803868|gb|AAO22056.1| IMB1 [Arabidopsis thaliana]
gi|110741364|dbj|BAF02232.1| RING3 protein-like [Arabidopsis thaliana]
gi|111074406|gb|ABH04576.1| At2g34900 [Arabidopsis thaliana]
gi|330253943|gb|AEC09037.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 132/255 (51%), Gaps = 15/255 (5%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
P KGNS E K +S LM+Q + ++ H++ W F PVDV L + D
Sbjct: 87 PNNSKGNSAGKEKSKGKHVSSPD---LMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHD 143
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y+ VI+ PMDLGTIK K+ S +YS+ ADVRL F NAM YN + DV++MA++L +
Sbjct: 144 YYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEK 203
Query: 299 FEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRM--GMPPMKK------KKVSPKETKI 350
FE +W I KL V + V A+ + M M + ++ + K+
Sbjct: 204 FEEKWLLIMPKL-VEEEKKQVDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKL 262
Query: 351 KAEPVRRV--MTNEEKRILSTELEALL-EELPESIIDFLKEHSAGETGEDELEIDIDALS 407
+ V+R ++ +EK+ LS L L E+L +++ + + + G E+E+DID +
Sbjct: 263 RESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQT 322
Query: 408 DDTLFALRKLLDDYL 422
D TL+ L+ + + L
Sbjct: 323 DVTLWRLKVFVQEAL 337
>gi|125591682|gb|EAZ32032.1| hypothetical protein OsJ_16210 [Oryza sativa Japonica Group]
Length = 515
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 20/262 (7%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C+ +L +L + FN PV+V +L + DY VIK PMDLGT++ + +G+Y
Sbjct: 1 MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA----IEKKLPV----TVDM 316
FAAD+RLTFSNA+ YNP ++VH A L FE +KA E++L +
Sbjct: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVP 120
Query: 317 TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLE 376
A + + R G M+K K EP +R MT EEK +L LE+L E
Sbjct: 121 PPELPPAKAPAQVKPRAGNVKMRKTKAR--------EPNKREMTLEEKNLLRVGLESLPE 172
Query: 377 ELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQANPG 433
E +++ +++ + E E+E+DID + +T + L + ++ + L K ++ A
Sbjct: 173 EKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIVN 232
Query: 434 PCEMEVLNESGLSNSSMQLCKG 455
+V++ S ++N S L G
Sbjct: 233 GENADVIDAS-VANDSDMLVNG 253
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 343 VSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEI 401
V ++TK + EP +R MT EEK +L LE+L EE +++ +++ + E E+E+
Sbjct: 300 VKMRKTKAR-EPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIEL 358
Query: 402 DIDALSDDTLFALRKLLDDY--LLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKG 455
DID + +T + L + ++ + L K ++ A +V++ S ++N S L G
Sbjct: 359 DIDEMDVETQWELDRFVNKFKKALNKSRRAAIVNGENADVIDAS-VANDSDMLVNG 413
>gi|357166043|ref|XP_003580578.1| PREDICTED: transcription factor GTE7-like [Brachypodium distachyon]
Length = 458
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 2/219 (0%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C +L RL + FN PV+V +L + DY VIK PMDLGT++ ++ + Y
Sbjct: 124 MRKRCAQILARLQKDKRSIWFNAPVEVERLGLHDYHAVIKSPMDLGTVRARLAAKAYPSH 183
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRAD 324
AFAADVRLTFSNA+ YNP +DVHI A L FE ++A A P
Sbjct: 184 DAFAADVRLTFSNALRYNPAGHDVHIFAGDLLASFEKMYRAAVSWFEEECKRLAPPPPMP 243
Query: 325 DMIETETRMGMPPMKKKKVSPKETKIKA-EPVRRVMTNEEKRILSTELEALLEELPESII 383
E + P + K + + K KA EP +R M+ +EK +L LE+L EE +++
Sbjct: 244 VAAELPPPPVVVPAQVKPRAARMRKPKAREPNKREMSLDEKNMLREGLESLPEEKMHNVL 303
Query: 384 DFLKEHSAGET-GEDELEIDIDALSDDTLFALRKLLDDY 421
+++ + DE+E+DID + +T + L + ++++
Sbjct: 304 QIVRKRNVNPALLGDEIELDIDEMDIETQWELDRFVNNF 342
>gi|327488240|sp|Q9LXA7.2|GTE2_ARATH RecName: Full=Transcription factor GTE2; AltName:
Full=Bromodomain-containing protein GTE2; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E2
Length = 581
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 122/236 (51%), Gaps = 30/236 (12%)
Query: 79 ISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS---LSSNVV 135
+S ++DGY + + R L+ +L ++LE+VR L++++ S +S +V
Sbjct: 70 VSFDLDGY---------------TSNQLRELKKRLNSELEEVRFLRERIESGTFVSGSVY 114
Query: 136 LSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRA-PNGRNGPQTKKGNSGRLEPKKP 194
++ RS G+ + G+KR+ P + P K+ + L +K
Sbjct: 115 ---TTQARSFA-GETNDVGVKKTKTKKKKIGHGQKRSNPFATDEPSLKRHVALDLMSEKV 170
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
+ +M C +L +LM H++ WVF PVDV+ L + DY ++ PMDLGT+K
Sbjct: 171 LKS-------MMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKM 223
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ G Y P+ FA+DVRLTF+NAM+YNP DV++MA+ L F+V + K+
Sbjct: 224 NLEKGLYRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRF 279
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 353 EPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTL 411
+P +R MT +EK L L+ L E +I L++ + + DE+E+DI+AL ++TL
Sbjct: 393 DPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETL 452
Query: 412 FALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVD 464
+ L + + +Y + K ++Q + P M + E G + + KG + +EDVD
Sbjct: 453 WELDRFVTNYRKMASKIKRQGFIQNVSTPPRNMPPVTEMGSAEKRGR--KGGEAGEEDVD 510
Query: 465 IVGGNDPPVTDIPPVAIEK 483
I G D PV D P V IE+
Sbjct: 511 I--GEDIPVEDYPSVEIER 527
>gi|38344163|emb|CAE03494.2| OSJNBa0053K19.2 [Oryza sativa Japonica Group]
gi|38345711|emb|CAD41833.2| OSJNBb0085C12.13 [Oryza sativa Japonica Group]
Length = 299
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 133/257 (51%), Gaps = 19/257 (7%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C+ +L +L + FN PV+V +L + DY VIK PMDLGT++ + +G+Y
Sbjct: 1 MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA----IEKKLPV----TVDM 316
FAAD+RLTFSNA+ YNP ++VH A L FE +KA E++L +
Sbjct: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVP 120
Query: 317 TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLE 376
A + + R G M+K K EP +R MT EEK +L LE+L E
Sbjct: 121 PPELPPAKAPAQVKPRAGNVKMRKTKAR--------EPNKREMTLEEKNLLRVGLESLPE 172
Query: 377 ELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQANPG 433
E +++ +++ + E E+E+DID + +T + L + ++ + L K ++ A
Sbjct: 173 EKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIVN 232
Query: 434 PCEMEVLNESGLSNSSM 450
+V++ S ++S M
Sbjct: 233 GENADVIDASVANDSDM 249
>gi|15238195|ref|NP_196617.1| global transcription factor group E2 [Arabidopsis thaliana]
gi|7671448|emb|CAB89388.1| bromodomain protein-like [Arabidopsis thaliana]
gi|332004179|gb|AED91562.1| global transcription factor group E2 [Arabidopsis thaliana]
Length = 678
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 30/236 (12%)
Query: 79 ISLNIDGYDNFGVPLQVLTLSKMSQTERRSLELKLKTDLEQVRVLQKKVAS---LSSNVV 135
+S ++DGY + + R L+ +L ++LE+VR L++++ S +S +V
Sbjct: 145 VSFDLDGY---------------TSNQLRELKKRLNSELEEVRFLRERIESGTFVSGSVY 189
Query: 136 LSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRA-PNGRNGPQTKKGNSGRLEPKKP 194
+ + G+ + G+KR+ P + P K+ + L +K
Sbjct: 190 TTQARSFA----GETNDVGVKKTKTKKKKIGHGQKRSNPFATDEPSLKRHVALDLMSEKV 245
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
+ +M C +L +LM H++ WVF PVDV+ L + DY ++ PMDLGT+K
Sbjct: 246 LKS-------MMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKM 298
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ G Y P+ FA+DVRLTF+NAM+YNP DV++MA+ L F+V + K+
Sbjct: 299 NLEKGLYRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRF 354
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 353 EPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTL 411
+P +R MT +EK L L+ L E +I L++ + + DE+E+DI+AL ++TL
Sbjct: 468 DPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETL 527
Query: 412 FALRKLLDDY--LLEKQQKQA-----NPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVD 464
+ L + + +Y + K ++Q + P M + E G + + KG + +EDVD
Sbjct: 528 WELDRFVTNYRKMASKIKRQGFIQNVSTPPRNMPPVTEMGSAEKRGR--KGGEAGEEDVD 585
Query: 465 IVGGNDPPVTDIPPVAIEK 483
I G D PV D P V IE+
Sbjct: 586 I--GEDIPVEDYPSVEIER 602
>gi|297723469|ref|NP_001174098.1| Os04g0622700 [Oryza sativa Japonica Group]
gi|255675790|dbj|BAH92826.1| Os04g0622700 [Oryza sativa Japonica Group]
Length = 355
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 20/262 (7%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C+ +L +L + FN PV+V +L + DY VIK PMDLGT++ + +G+Y
Sbjct: 1 MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA----IEKKLPV----TVDM 316
FAAD+RLTFSNA+ YNP ++VH A L FE +KA E++L +
Sbjct: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVP 120
Query: 317 TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLE 376
A + + R G M+K K EP +R MT EEK +L LE+L E
Sbjct: 121 PPELPPAKAPAQVKPRAGNVKMRKTKAR--------EPNKREMTLEEKNLLRVGLESLPE 172
Query: 377 ELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQANPG 433
E +++ +++ + E E+E+DID + +T + L + ++ + L K ++ A
Sbjct: 173 EKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIVN 232
Query: 434 PCEMEVLNESGLSNSSMQLCKG 455
+V++ S ++N S L G
Sbjct: 233 GENADVIDAS-VANDSDMLVNG 253
>gi|168002796|ref|XP_001754099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694653|gb|EDQ81000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 124/245 (50%), Gaps = 20/245 (8%)
Query: 197 AASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
A S N LM Q + ++ H++ W F PVDV L + DY VI+ PMDLGTIK K+
Sbjct: 216 ARSKRNQELMNQIRGIWRQISQHKWAWPFLKPVDVEGLGLHDYNDVIEKPMDLGTIKNKM 275
Query: 257 ----TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA-IEKKLP 311
TSG Y D+RL FSNAMTYNP +DVH+M+ TL FE +WKA IE KL
Sbjct: 276 DAKDTSG-YQHVQEVCDDMRLVFSNAMTYNPEGSDVHVMSKTLSDKFEEKWKALIEPKLH 334
Query: 312 V----------TVDMTAVPSRADDMIETE--TRMGMPPMKKKKVSPKETKIKAEP-VRRV 358
V + + + I+T+ T + +++ ++ K +A P R
Sbjct: 335 FEESKTQQEDNEVQLKEAGMQVVEEIDTKKLTEQYLLQLEELDKQLEDLKRQAAPTCSRA 394
Query: 359 MTNEEKRILSTELEALLEELPESIIDFLKEHS-AGETGEDELEIDIDALSDDTLFALRKL 417
M+ EEKR L L L E +I + + + + DE+E+DIDA TL+ L++
Sbjct: 395 MSIEEKRHLGQNLGKLPPENLSHVIQIIAQRNPSFNINSDEVEVDIDAQDPATLWRLQRY 454
Query: 418 LDDYL 422
+ L
Sbjct: 455 VQAVL 459
>gi|294462729|gb|ADE76909.1| unknown [Picea sitchensis]
Length = 377
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 124/242 (51%), Gaps = 13/242 (5%)
Query: 190 EPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDL 249
E + S A LM+Q +L ++ H++ W F TPVDV L + DY VIK PMD
Sbjct: 94 EASRREAGCSKRMAELMRQFSTILRQITQHRWAWPFMTPVDVKGLGLHDYHDVIKKPMDF 153
Query: 250 GTIKCKITSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
GTI+ K+ + Y + DVRL F NA+TYN Q+DVH+MA TL + FE +WK +
Sbjct: 154 GTIRRKMDAKDATGYKNVCDICEDVRLVFKNAVTYNDDQSDVHVMAKTLSQKFEEKWKTL 213
Query: 307 EKKLPVTVDMTA-----VPSR--ADDMIETETRMGMPPMKKKKVSPKETKIKAE--PVRR 357
K+ SR D + ET + + +++ K++ E P R
Sbjct: 214 WPKVNEEEARRKKEEADANSREMVDSRLSGETDLEKLGGELDELNEHLEKLRQELAPKCR 273
Query: 358 VMTNEEKRILSTELEALL-EELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRK 416
+M+ EEKR L L L E+L +++ +++ + EDE+E+DIDA TL+ L+
Sbjct: 274 MMSVEEKRQLGESLGKLSPEDLTKALQIIAQKNPSFIPTEDEVELDIDAQDASTLWRLQY 333
Query: 417 LL 418
+
Sbjct: 334 FV 335
>gi|62321808|dbj|BAD95432.1| RING3 protein-like [Arabidopsis thaliana]
Length = 386
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 131/255 (51%), Gaps = 15/255 (5%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
P KGNS E K +S LM+Q + ++ H++ W F PVDV L + D
Sbjct: 87 PNNSKGNSAGKEKSKGKHVSSPD---LMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHD 143
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y+ VI+ PMDLGTIK K+ S +YS+ ADVRL F NAM YN + DV++MA++L +
Sbjct: 144 YYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEK 203
Query: 299 FEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRM--GMPPMKK------KKVSPKETKI 350
FE +W I KL V + V A+ + M M + ++ + K+
Sbjct: 204 FEEKWLLIMPKL-VEEEKKQVDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKL 262
Query: 351 KAEPVRRV--MTNEEKRILSTELEALL-EELPESIIDFLKEHSAGETGEDELEIDIDALS 407
+ V+R ++ +EK+ LS L L E+L +++ + + + G E+ +DID +
Sbjct: 263 RESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVGLDIDVQT 322
Query: 408 DDTLFALRKLLDDYL 422
D TL+ L+ + + L
Sbjct: 323 DVTLWRLKVFVQEAL 337
>gi|168062324|ref|XP_001783131.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665381|gb|EDQ52068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 11/234 (4%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI----TSGQY 261
M+Q ++L ++ SH++ W F PVDV L + DY+ VI+ PMDLGTIK K+ SG Y
Sbjct: 1 MRQVLSILRQISSHKWAWPFMKPVDVKGLGLHDYYEVIEKPMDLGTIKNKMDAKDASG-Y 59
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA-IEKKLPVTVDMTAVP 320
DVRL FSNAM YNP +DV++M+ TL + FE +WK +E KL VD+ +
Sbjct: 60 QHVQEVYQDVRLVFSNAMKYNPEGSDVYVMSKTLSEKFEEKWKTLVEPKLHEEVDIFSGI 119
Query: 321 SRADDMIETETRMGMPPMKKKKVSPKETKIKAEP-VRRVMTNEEKRILSTELEALLEELP 379
D + + + K+ ++ K +A P + R M+ EE+R L L L +
Sbjct: 120 VDHDLHFLMASTFFLEELDKQL---EDLKQQATPKLSRAMSVEERRHLGQSLGRLPPDNL 176
Query: 380 ESIIDFL-KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANP 432
+I + +++ + DE+E+DIDA TL+ L++ + L +QA P
Sbjct: 177 SHVIQIIAQKNPSFNMNSDEVEVDIDAQDPATLWRLQRYVQAVLSGSGGRQATP 230
>gi|3033386|gb|AAC12830.1| putative RING3 protein [Arabidopsis thaliana]
Length = 400
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 27/268 (10%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
P KGNS E K +S LM+Q + ++ H++ W F PVDV L + D
Sbjct: 87 PNNSKGNSAGKEKSKGKHVSSPD---LMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHD 143
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y+ VI+ PMDLGTIK K+ S +YS+ ADVRL F NAM YN + DV++MA++L +
Sbjct: 144 YYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEK 203
Query: 299 FEVRWKAI----------------EKKLPVTVDMTAVPSR-ADDMIETETRMGMPPMKKK 341
FE +W I EK + M A + A D+ + + K +
Sbjct: 204 FEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLR 263
Query: 342 KVSPKETKIKAE------PVRRVMTNEEKRILSTELEALL-EELPESIIDFLKEHSAGET 394
+ + +++ + R ++ +EK+ LS L L E+L +++ + + +
Sbjct: 264 ESVVQRCRVRNRVFGVVLEINRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPA 323
Query: 395 GEDELEIDIDALSDDTLFALRKLLDDYL 422
G E+E+DID +D TL+ L+ + + L
Sbjct: 324 GAPEVELDIDVQTDVTLWRLKVFVQEAL 351
>gi|226493721|ref|NP_001146156.1| uncharacterized protein LOC100279725 [Zea mays]
gi|219885991|gb|ACL53370.1| unknown [Zea mays]
gi|413921106|gb|AFW61038.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 484
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 23/241 (9%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C ++L RL + FN+PVDV L + DY +I+ PMDLGT+K +T+G+Y
Sbjct: 138 MRKRCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSH 197
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE------VRW-----KAIEKKLPVT 313
AFA DVRLTF+NA+ YNPP + VH A L FE V W + +E +
Sbjct: 198 EAFAGDVRLTFNNALRYNPPDHHVHRYAGNLLASFEGMYKEAVSWFEQQRQQLEPPMQPD 257
Query: 314 VDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEA 373
+ ++ RMG ++ PK EP +R M EEK+ L E+E
Sbjct: 258 LPPPPQLPVVSVPVQAPPRMG---GGGRRPKPKAR----EPNKREMDEEEKQKLRVEIEN 310
Query: 374 LLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQ 429
L EE +++ +++ ++ TGE +E+D D L +TL+ L + + ++ L+K Q+
Sbjct: 311 LPEEKMLNVLQIVQKRNSDPAFTGE-VVELDFDELDMETLWELDRFVVNWRKALKKSQRN 369
Query: 430 A 430
+
Sbjct: 370 S 370
>gi|255084403|ref|XP_002508776.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226524053|gb|ACO70034.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 852
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 8/132 (6%)
Query: 182 KKGN---SGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
KKGN L+ ++ G + + LMK+C L+ + H++ W FN PVD + L+IPD
Sbjct: 227 KKGNVITHRMLKAQEIEGIRAIRHKALMKECRECLSSVRKHKYAWAFNKPVDPIALHIPD 286
Query: 239 YFTVIKHPMDLGTIKCKI-----TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMAD 293
YF +IK+PMD GTIK K+ +G YS P FA D+RL F N YN P +D +M
Sbjct: 287 YFDIIKNPMDFGTIKEKLDKKSQQNGAYSGPQEFADDMRLVFDNCALYNTPDSDAGLMGS 346
Query: 294 TLRKYFEVRWKA 305
TL++ FE W A
Sbjct: 347 TLQQEFEKAWLA 358
>gi|384247311|gb|EIE20798.1| hypothetical protein COCSUDRAFT_43706 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
++ KQC ++L +++H++ W F PVD+ + DY V+K PMDL +K K+ GQY+
Sbjct: 88 IVSKQCMSVLKSILAHKWAWPFADPVDLARYA--DYLNVVKSPMDLKWVKRKVEGGQYAT 145
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
P FAAD RL F+NA TYNPP DV++MA TL FE +W ++
Sbjct: 146 PAEFAADFRLVFANAHTYNPPGTDVYVMASTLLARFEDKWNSV 188
>gi|428180935|gb|EKX49800.1| hypothetical protein GUITHDRAFT_67457 [Guillardia theta CCMP2712]
Length = 117
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Query: 199 SSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS 258
S + +K+C +L L +H+ GWVF+ PVD +KLNIPDY +IK PMDLGT++ + +
Sbjct: 2 SGQKSEWVKKCIGILKVLKNHKHGWVFSEPVDPVKLNIPDYLEIIKKPMDLGTVRTHLDN 61
Query: 259 GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDM 316
G ++P F +V LTF NAM YNP +DVHIMA TL+ EVR + + K PVT+ +
Sbjct: 62 GTITNPEEFKTNVVLTFDNAMRYNPSNHDVHIMAKTLK---EVRTRLVAKLPPVTITI 116
>gi|413921105|gb|AFW61037.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 429
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 23/241 (9%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C ++L RL + FN+PVDV L + DY +I+ PMDLGT+K +T+G+Y
Sbjct: 138 MRKRCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSH 197
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE------VRW-----KAIEKKLPVT 313
AFA DVRLTF+NA+ YNPP + VH A L FE V W + +E +
Sbjct: 198 EAFAGDVRLTFNNALRYNPPDHHVHRYAGNLLASFEGMYKEAVSWFEQQRQQLEPPMQPD 257
Query: 314 VDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEA 373
+ ++ RMG ++ PK EP +R M EEK+ L E+E
Sbjct: 258 LPPPPQLPVVSVPVQAPPRMG---GGGRRPKPKAR----EPNKREMDEEEKQKLRVEIEN 310
Query: 374 LLEELPESIIDFLKEHSA--GETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQ 429
L EE +++ +++ ++ TGE +E+D D L +TL+ L + + ++ L+K Q+
Sbjct: 311 LPEEKMLNVLQIVQKRNSDPAFTGE-VVELDFDELDMETLWELDRFVVNWRKALKKSQRN 369
Query: 430 A 430
+
Sbjct: 370 S 370
>gi|297826963|ref|XP_002881364.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327203|gb|EFH57623.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 28/270 (10%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
P K NS E K +S LM+Q + ++ H++ W F PVDV L + D
Sbjct: 87 PNNSKCNSAGKEKSKGKHVSSPD---LMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHD 143
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y+ VI+ PMDLGTIK K+ S +YS+ ADVRL F NAM YN + DV++MA++L +
Sbjct: 144 YYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEK 203
Query: 299 FEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPK-------ETKIK 351
FE +W I KL + +AD+ E + + + E ++
Sbjct: 204 FEEKWLLIMPKL-----VEEEKKQADEEAEKHANKQLTLEAAQAEMARDLSNELYEIDLQ 258
Query: 352 AEPVR-------RVMTNEEKRILSTELEALL-EELPESIIDFLKEHSAGETGEDELEIDI 403
E +R R ++ +EK+ LS L L E+L +++ + + + G E+E+DI
Sbjct: 259 LERLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDI 318
Query: 404 DALSDDTLFALRKLLDDYLLEKQQKQANPG 433
D +D TL+ L+ + + L K AN G
Sbjct: 319 DVQTDVTLWRLKVFVQEAL-----KAANKG 343
>gi|47210026|emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1594
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 47/258 (18%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C L+ ++S + + W F PVDV L + DY+ +IKHPMDL TIK K+ S QY
Sbjct: 745 LRFCARLVREMLSRKHASYAWPFYKPVDVTSLGLHDYYDIIKHPMDLSTIKKKMDSRQYR 804
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI----EKKLPVTVDMTA 318
D FAADVRL FSN YNPP +DV MA L+ FE+R+ + E+ +PV +A
Sbjct: 805 DAQEFAADVRLMFSNCYKYNPPDHDVVSMARNLQDVFEMRFAKMPDDPEEAVPVPTPSSA 864
Query: 319 VPSRADDMIETETRMGMPPM---------------------KKKKVS--PKETKIKAEPV 355
+ + TR PP ++++++ ++T + + P
Sbjct: 865 L------LPAPSTRQVPPPAVSDDSSSSSESECSSADSEKERQQRLAQLQEQTAVVSSPD 918
Query: 356 R---------RVMTNEEKRILSTELEALLEELPESIIDFL--KEHSAGETGEDELEIDID 404
R M+ EEKR LS ++ L + ++ + +E S + DE+EID +
Sbjct: 919 AFGSVSTERCRPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKSSNPDEIEIDFE 978
Query: 405 ALSDDTLFALRKLLDDYL 422
L TL L K + L
Sbjct: 979 TLKPSTLRELEKYVSSCL 996
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 187 GRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
G L+PK+ ++ L+K+ +L L H F W F PVD +KLN+PDY+ +IK P
Sbjct: 449 GPLQPKR----QTNQLQYLLKE---VLKSLWKHHFAWPFQAPVDAVKLNLPDYYKIIKTP 501
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L K F
Sbjct: 502 MDMGTIKRRLENNYYWNAQECIHDFNTMFTNCYIYNKPGDDIVLMAEALEKVF 554
>gi|357144694|ref|XP_003573382.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 488
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 158/327 (48%), Gaps = 50/327 (15%)
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A + K+C +LT++ + FN PVDV +L + DY VI++PMDLGT+K +T+G+Y
Sbjct: 130 AAMRKRCAQILTKIRKQRNSVWFNKPVDVERLKLHDYHAVIRNPMDLGTVKENLTAGRYH 189
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE------VRW--KAIEKKLPV-- 312
AFA DVRLTF+NA+ YNP + VH A +L FE V W + E P+
Sbjct: 190 SHEAFADDVRLTFNNALRYNPVGHQVHRSAGSLLASFEGMYGEAVSWFEQECEHFEPMQL 249
Query: 313 ---------TVDMTAVPSRADDMIETETRMGMPPMKKKKVSP-KETKIKA-EPVRRVMTN 361
+ R+ PP ++ P + K KA EP +R M++
Sbjct: 250 ALPPPPMLALPPPPQPLVPVPVRVSPVPRLQEPP----RMGPGRRPKPKAREPNKREMSD 305
Query: 362 EEKRILSTELEALLEELPESIIDFLKEHSAGETGEDE-LEIDIDALSDDTLFALRKLLDD 420
EEK L E+E L EE E+++ +++ S+ E +E+D D + DTL+ L + + +
Sbjct: 306 EEKHKLRVEIENLPEEKMENVLQIVQKRSSDPALMGEVVELDFDEMDVDTLWELDRFVVN 365
Query: 421 Y---LLEKQQKQANPG--------PCEMEVLNES---------GLSNSSM--QLCKGNDL 458
+ L + +Q G P E +++ + G S + M + ++
Sbjct: 366 WKKALKKNRQTVVMNGDAVVTPVIPIEDDMMMVNVDTTVVVDIGESETDMPEKRTSEAEM 425
Query: 459 VDEDVDIVGGNDPPVTDIPPVAIEKDA 485
VDE VDI G+ P + V IEKDA
Sbjct: 426 VDEYVDI--GDGMPTANYQSVEIEKDA 450
>gi|255565481|ref|XP_002523731.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223537035|gb|EEF38671.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 532
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ QC +L+ LM H GWVF PV+ KL I +I +PMDLGT+K K+ + +Y
Sbjct: 81 VIHQCASLVKSLMDHPCGWVFKEPVNPDKLKI-----IITNPMDLGTVKSKLENDRYFRI 135
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
FAADVRLTFSNA+ NPP N VH MA+ L++ FE RW A+E+K
Sbjct: 136 EEFAADVRLTFSNALLCNPPPNCVHKMAEKLKRIFETRWNALEEKW 181
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 105/171 (61%), Gaps = 15/171 (8%)
Query: 590 QVSPDKLYRAALLRNRFADTILKAR-EKALEKGEKRDPEKLRIEREELERRHREEKARLQ 648
Q+SP K RAA+++ RFADTI KA+ +K L G+K DP KL+ E+E LE+R EEKAR++
Sbjct: 372 QLSPTKTLRAAVIKRRFADTIFKAQLKKLLHHGDKADPVKLQQEKERLEKRQLEEKARIE 431
Query: 649 AEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRI 708
A+ +AAE A RK E E KR+RE EREAAR ALQ ME+T +I +N+ +++LE L
Sbjct: 432 AQIRAAEAASRKRE---GIELKRQREKEREAARVALQKMEETAEIEQNTEIIKELEKLSG 488
Query: 709 AQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEV 759
SF P+ S + LE+LGL +K D D++E+
Sbjct: 489 CSLPYNYSF-GRRGPEGAH----------SCSLLERLGLILKDDIVDDDEI 528
>gi|42571057|ref|NP_973602.1| Transcription factor GTE6 [Arabidopsis thaliana]
gi|330253942|gb|AEC09036.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 276
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 12/228 (5%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
M+Q + ++ H++ W F PVDV L + DY+ VI+ PMDLGTIK K+ S +YS+
Sbjct: 1 MRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVR 60
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADD 325
ADVRL F NAM YN + DV++MA++L + FE +W I KL V + V A+
Sbjct: 61 EIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKL-VEEEKKQVDEEAEK 119
Query: 326 MIETETRM--GMPPMKK------KKVSPKETKIKAEPVRRV--MTNEEKRILSTELEALL 375
+ M M + ++ + K++ V+R ++ +EK+ LS L L
Sbjct: 120 HANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLS 179
Query: 376 -EELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYL 422
E+L +++ + + + G E+E+DID +D TL+ L+ + + L
Sbjct: 180 PEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEAL 227
>gi|255641563|gb|ACU21055.1| unknown [Glycine max]
Length = 363
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 26/257 (10%)
Query: 198 ASSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
ASS+ M LM+Q +L ++ H++ W F PVDV L + DY+ +I PMD GTIK K
Sbjct: 81 ASSAKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSK 140
Query: 256 ITSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP- 311
+ + Y++ ADVRL F NAM YN +NDVH+MA TL + FE +W + K+
Sbjct: 141 MEAKDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKWLQLLPKVAE 200
Query: 312 -------------VTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRV 358
+ + + + A+ + T + M K S KE I + R++
Sbjct: 201 EEKRQLEEEAQAQLDIQLALETTYANKAKDISTELCEIDMHLK--SLKEMVI--QQCRKL 256
Query: 359 MTNEEKRILSTELEALLEELPESIIDFLKEHS--AGETGEDELEIDIDALSDDTLFALRK 416
T E+K ++S + LE L + +D + E + + +++ +D+DA SD TL+ L+
Sbjct: 257 STQEKKMLMSALGKLSLENLYRA-LDIIAETNPMFQPSSTEDVVLDLDAQSDYTLWRLKA 315
Query: 417 LLDDYLLEKQQKQANPG 433
+ D L E+ + A G
Sbjct: 316 FVKDSLEEQVKVNAGAG 332
>gi|356526669|ref|XP_003531939.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 367
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 26/257 (10%)
Query: 198 ASSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
ASS+ M LM+Q +L ++ H++ W F PVDV L + DY+ +I PMD GTIK K
Sbjct: 81 ASSAKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSK 140
Query: 256 ITSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP- 311
+ + Y++ ADVRL F NAM YN +NDVH+MA TL + FE +W + K+
Sbjct: 141 MEAKDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKWLQLLPKVAE 200
Query: 312 -------------VTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRV 358
+ + + + A+ + T + M K S KE I + R++
Sbjct: 201 EEKRQLEEEAQAQLDIQLALETTYANKAKDISTELCEIDMHLK--SLKEMVI--QQCRKL 256
Query: 359 MTNEEKRILSTELEALLEELPESIIDFLKEHS--AGETGEDELEIDIDALSDDTLFALRK 416
T E+K ++S + LE L + +D + E + + +++ +D+DA SD TL+ L+
Sbjct: 257 STQEKKMLMSALGKLSLENLYRA-LDIIAETNPMFQPSSTEDVVLDLDAQSDYTLWRLKA 315
Query: 417 LLDDYLLEKQQKQANPG 433
+ D L E+ + A G
Sbjct: 316 FVKDSLEEQVKVNAGAG 332
>gi|348690450|gb|EGZ30264.1| hypothetical protein PHYSODRAFT_310264 [Phytophthora sojae]
Length = 1333
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 71/121 (58%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
M MK+C ++L LMS+ F PVD + L IPDYF VIK PMDLGTI+ + +G Y
Sbjct: 331 MSMKKCLSILKGLMSNPKSAPFLVPVDPVALGIPDYFHVIKEPMDLGTIRSNLETGFYDT 390
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRA 323
P AFA VRL F NAM YN + VHI A L FE R+K++ KL ++ S+
Sbjct: 391 PSAFAEHVRLVFRNAMLYNAAHSQVHIYARKLMDDFERRFKSLNVKLSTKCKLSDPKSKK 450
Query: 324 D 324
D
Sbjct: 451 D 451
>gi|255567701|ref|XP_002524829.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535889|gb|EEF37549.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 515
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 62/87 (71%)
Query: 228 PVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQND 287
PVD KL IPDYF++I +PMDLGT+K K+ + QY + FAADVRLTFSNA NPP N
Sbjct: 91 PVDPDKLQIPDYFSIITNPMDLGTVKSKLENNQYFESEEFAADVRLTFSNASLCNPPPNY 150
Query: 288 VHIMADTLRKYFEVRWKAIEKKLPVTV 314
VH M + L+K FE RWKA+E+K V
Sbjct: 151 VHNMVEKLKKIFETRWKALEEKWNYQV 177
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 103/189 (54%), Gaps = 36/189 (19%)
Query: 590 QVSPDKLYRAALLRNRFADTILKAR-EKALEKGEKRDPEKLRIEREELERRHREEKARLQ 648
Q+SP K RAA+++ RFADTI KA+ +K L G+K DP KL+ E+E LE R EEKAR++
Sbjct: 360 QLSPTKALRAAMIKRRFADTIFKAQLKKRLPHGDKADPVKLQQEKERLEMRQLEEKARIE 419
Query: 649 AEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINENSRFMEDLEMLRI 708
A+ +AAE RE EREAAR ALQ MEKT +I +N +++LE L
Sbjct: 420 AQIRAAEH----------------REKEREAARIALQKMEKTAEIEQNIEIIKELEKLSG 463
Query: 709 AQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLGLYMKMDDDDEEEVEPPLTAKEP 768
SF P+ S + LE+LGL MK D D++E+ L
Sbjct: 464 CSLSYSYSF-GRRGPEGAH----------SCSLLERLGLIMKDDIVDDDEI---LNG--- 506
Query: 769 IKDVEEGEI 777
DVEEGEI
Sbjct: 507 --DVEEGEI 513
>gi|159475920|ref|XP_001696062.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158275233|gb|EDP01011.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 798
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 23/226 (10%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ + C + + L+ + VF PVD ++ +PDY I HPMDLGTIK K+ +Y+DP
Sbjct: 94 IWRLCGSTVDYLLKKKNAQVFGRPVDPVRDGVPDYLKFILHPMDLGTIKAKLRERRYNDP 153
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRAD 324
FAAD+RL +SN TYN V D L FE +W R D
Sbjct: 154 REFAADMRLVWSNCRTYNQIGTSVRQWGDQLSDDFERKWADYN-----------CEQRWD 202
Query: 325 DMIETETRMGMPPMKK---------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALL 375
D++ T + ++ ++V+ + +A+P R MT+ EKR LS L L
Sbjct: 203 DLMATRDPQNVSLDRRIASSARQLLQRVNSVQLMQEADPT-RAMTSVEKRKLSIALSELQ 261
Query: 376 EELPESIIDFLKEH--SAGETGEDELEIDIDALSDDTLFALRKLLD 419
+ +++ + E+ ++E+E+D+D L + TL+ LR+ D
Sbjct: 262 GDQLADVLNIIAENLKDVNPDDDEEIELDVDQLDNTTLWRLREYCD 307
>gi|218200605|gb|EEC83032.1| hypothetical protein OsI_28113 [Oryza sativa Indica Group]
Length = 481
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 8/222 (3%)
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A + K+C +LTRL + FN+PVDV +L + DY +I++PMDLGT+K + G+Y
Sbjct: 135 AAMRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYP 194
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK----AIEKKLPVTVDMTA 318
AFAADVRLTFSNA+ YNP + VH A L FE +K E++
Sbjct: 195 SHEAFAADVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMP 254
Query: 319 VPSRADDMIETETRMGMPPMKKKKVSPKETKIKA-EPVRRVMTNEEKRILSTELEALLEE 377
+ M PP + + K KA EP +R M++EEK L E+ L EE
Sbjct: 255 LALPPPPQPPVPMPMQAPP--RIGGGGRRPKPKAREPNKREMSDEEKHKLRVEIGNLPEE 312
Query: 378 LPESIIDFLKEHSAGETGEDE-LEIDIDALSDDTLFALRKLL 418
+++ +++ + E +E+D D + +TL+ L + +
Sbjct: 313 KMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWELDRFV 354
>gi|325190099|emb|CCA24581.1| histone acetyltransferase putative [Albugo laibachii Nc14]
Length = 2117
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L K+ E LL +M H+FGWVF++PVD + L IPDYF I+ PMDLGTIK K+ G Y
Sbjct: 1093 LKKRLEVLLKGMMEHKFGWVFSSPVDTVALEIPDYFRTIRRPMDLGTIKKKLDLGFYKHI 1152
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
FA+DVRLTF+NA YN +DVH +A + F V ++ +E
Sbjct: 1153 QHFASDVRLTFNNAKLYNSEGSDVHNLAKDMLNDFNVEFRKLE 1195
>gi|357130613|ref|XP_003566942.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 215
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 7/133 (5%)
Query: 176 RNGPQTKKGNSGRLEPKKPAGAASS--SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMK 233
R+ P + G + KKP A + +A +C LL +L+ H WVF+ PVDV +
Sbjct: 7 RDSPLPRPGFA-----KKPKNLADADPGHARAFDRCRELLDQLLQHDDAWVFDKPVDVYE 61
Query: 234 LNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMAD 293
L I DY+T+I PMDLGT+ ++ +Y+DP AFA DVRLTF NAMT+N + V+ A
Sbjct: 62 LGISDYYTMIPDPMDLGTVSSRLNRLRYADPRAFAEDVRLTFRNAMTFNDEDDAVYKSAA 121
Query: 294 TLRKYFEVRWKAI 306
L + FE W +I
Sbjct: 122 ELSRIFESGWASI 134
>gi|299472993|emb|CBN77394.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1359
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT---SGQYSDPLAFA 268
+LT+L QFGWVFN PVD + LN+PDYF +I HPMDLGT+ K+ +G Y + FA
Sbjct: 422 VLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEEFA 481
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
ADV+L F NAM YN P+++V+ +A+ ++K F W K++
Sbjct: 482 ADVQLVFDNAMKYNGPESEVYPVAERMKKEFNKDWALALKRM 523
>gi|115475161|ref|NP_001061177.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|40253661|dbj|BAD05604.1| putative RNA-binding protein Virp1a [Oryza sativa Japonica Group]
gi|113623146|dbj|BAF23091.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|215678743|dbj|BAG95180.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765310|dbj|BAG87007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767863|dbj|BAH00092.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640052|gb|EEE68184.1| hypothetical protein OsJ_26323 [Oryza sativa Japonica Group]
Length = 481
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 113/222 (50%), Gaps = 8/222 (3%)
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A + K+C +LTRL + FN+PVDV +L + DY +I++PMDLGT+K + G+Y
Sbjct: 135 AAMRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYP 194
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK----AIEKKLPVTVDMTA 318
AFA DVRLTFSNA+ YNP + VH A L FE +K E++
Sbjct: 195 SHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMP 254
Query: 319 VPSRADDMIETETRMGMPPMKKKKVSPKETKIKA-EPVRRVMTNEEKRILSTELEALLEE 377
+ M PP + + K KA EP +R M++EEK L E+ L EE
Sbjct: 255 LALPPPPQPPVPMPMQAPP--RIGGGGRRPKPKAREPNKREMSDEEKHKLRVEIGNLPEE 312
Query: 378 LPESIIDFLKEHSAGETGEDE-LEIDIDALSDDTLFALRKLL 418
+++ +++ + E +E+D D + +TL+ L + +
Sbjct: 313 KMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWELDRFV 354
>gi|348536160|ref|XP_003455565.1| PREDICTED: bromodomain-containing protein 3 [Oreochromis niloticus]
Length = 678
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ +L ++S + + W F PVD L + DY +IKHPMDL TI+ K+ G+YS
Sbjct: 308 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYS 367
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
DP +FA DVRL FSN YNPP ++V MA L+ FE+R+ I
Sbjct: 368 DPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 411
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KL + DY VIK+PMD+GTIK ++ + Y
Sbjct: 36 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLHDYHKVIKNPMDMGTIKKRLENNYYWSA 95
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 96 SEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 130
>gi|413917010|gb|AFW56942.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 487
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 125/237 (52%), Gaps = 14/237 (5%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ ++C ++LTRL + FN+PVDV L + DY +I+ PMDLGT+K +T+G+Y
Sbjct: 140 MRRRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSH 199
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE------VRWKAIEKKLPVTVDMTA 318
AFA DVRLTF+NA+ YNPP + VH A L FE V W +++ ++
Sbjct: 200 EAFAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKEAVSWFEQQRQ---QLEPPM 256
Query: 319 VPSRADDMIETETRMGMPPMKKKKV-SPKETKIKA-EPVRRVMTNEEKRILSTELEALLE 376
+ + +P ++ + K KA +P +R M EEK+ L E+E L E
Sbjct: 257 QLDLLPPPPPPQLPVSVPVQAPLRMWGGRRPKPKARQPNKREMDEEEKQKLRVEIENLPE 316
Query: 377 ELPESIIDFLKEHSAGETGEDE-LEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA 430
+ +++ +++ + E +E+D D L +TL+ L + + ++ L+K Q+ +
Sbjct: 317 DKVLNVLQIVQKRNRDPALSGEVVELDFDELDIETLWELDRFVVNWRKALKKSQRNS 373
>gi|66826485|ref|XP_646597.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
gi|74858341|sp|Q55C84.1|Y0170_DICDI RecName: Full=Bromodomain-containing protein DDB_G0270170
gi|60474498|gb|EAL72435.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
Length = 1578
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 161 SVVLAPKGKKRAP-NGRNGPQTKKGNSGRLEPKKPAGAASSSNAM--LMKQCENLLTRLM 217
S L P+ K R P NG + + ++ + GR+ G A + + K+C +LL L
Sbjct: 699 SAPLIPQIKPRLPLNGGSSERAQRSSRGRM------GKAMRDVVLTPVFKRCLDLLEELF 752
Query: 218 SHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSN 277
HQ F VD L I DYF VIKHPMDLGTIK + G Y FA D RL FSN
Sbjct: 753 EHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGGGYDTIDKFAEDCRLVFSN 812
Query: 278 AMTYNPPQNDVHIMADTLRKYFE 300
A TYNP N VHIMA +L FE
Sbjct: 813 AKTYNPSTNPVHIMAQSLEDVFE 835
>gi|412988890|emb|CCO15481.1| bromodomain-containing protein [Bathycoccus prasinos]
Length = 947
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
+L+K C ++L + ++F W+F PVD +KL IPDY+ ++K+PMDLG +K K+ +Y+
Sbjct: 324 VLIKSCRDVLNHVKRNKFHWIFTQPVDAVKLGIPDYYEIVKNPMDLGKVKEKLDGKKYTW 383
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
P FA D+RL F N YN D M +T+R FE W
Sbjct: 384 PTDFADDMRLIFDNCALYNGTTTDAGQMGETVRGAFEEGW 423
>gi|413917011|gb|AFW56943.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 493
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 125/237 (52%), Gaps = 14/237 (5%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ ++C ++LTRL + FN+PVDV L + DY +I+ PMDLGT+K +T+G+Y
Sbjct: 140 MRRRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSH 199
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE------VRWKAIEKKLPVTVDMTA 318
AFA DVRLTF+NA+ YNPP + VH A L FE V W +++ ++
Sbjct: 200 EAFAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKEAVSWFEQQRQ---QLEPPM 256
Query: 319 VPSRADDMIETETRMGMPPMKKKKV-SPKETKIKA-EPVRRVMTNEEKRILSTELEALLE 376
+ + +P ++ + K KA +P +R M EEK+ L E+E L E
Sbjct: 257 QLDLLPPPPPPQLPVSVPVQAPLRMWGGRRPKPKARQPNKREMDEEEKQKLRVEIENLPE 316
Query: 377 ELPESIIDFLKEHSAGETGEDE-LEIDIDALSDDTLFALRKLLDDY--LLEKQQKQA 430
+ +++ +++ + E +E+D D L +TL+ L + + ++ L+K Q+ +
Sbjct: 317 DKVLNVLQIVQKRNRDPALSGEVVELDFDELDIETLWELDRFVVNWRKALKKSQRNS 373
>gi|213983065|ref|NP_001135690.1| bromodomain containing 4 [Xenopus (Silurana) tropicalis]
gi|197245689|gb|AAI68637.1| Unknown (protein for MGC:186343) [Xenopus (Silurana) tropicalis]
Length = 1364
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGN--------SGRLEPKK-PAGAASSSN 202
PL ES PS PK R +GR TKK L+P+ P S
Sbjct: 316 PLHESSPLPSDSKPPKAGPRKESGRQIRPTKKTEVPDSQLPAPPVLQPQPTPTAEKDSKT 375
Query: 203 AMLMKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
+ ++ C ++ + S HQ + W F PVDV L + DY +IKHPMDLGTIK K+ +
Sbjct: 376 SEQLRYCAGIIREMFSKKHQAYAWPFYKPVDVDALGLHDYREIIKHPMDLGTIKVKMDNW 435
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y D FA+DVRL FSN YNPP ++V IMA L+ FE+R+
Sbjct: 436 DYKDAKEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRY 479
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 178 GPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR----LMSHQFGWVFNTPVDVMK 233
PQ + NS L P P A S Q + LL L HQF W F PVDV+K
Sbjct: 34 APQPQPQNSSLLNPPPPDIARPSQAKRQTNQLQYLLKTVLKTLWKHQFAWPFQLPVDVVK 93
Query: 234 LNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMAD 293
LN+PDY +IK+PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+
Sbjct: 94 LNLPDYHKIIKNPMDMGTIKKRLENHYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAE 153
Query: 294 TLRKYF 299
L K F
Sbjct: 154 ALEKLF 159
>gi|167999165|ref|XP_001752288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696683|gb|EDQ83021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 118/240 (49%), Gaps = 28/240 (11%)
Query: 215 RLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---YSDPLAFAADV 271
++ H++ W F PVDV L + DY+ VI+ PMDLGTIK K+ Y DV
Sbjct: 1 QISQHKWAWPFMKPVDVKGLGLHDYYDVIEKPMDLGTIKNKLDVKDGLGYQHVQEVCDDV 60
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA-IEKKLPVTVDMTAVPSRADDMIETE 330
RL FSNAMTYNP +DV++M+ TL FE +WK IE KL + R+ D E +
Sbjct: 61 RLVFSNAMTYNPEGSDVYVMSKTLSDKFEEKWKTLIEPKLQEEL------KRSHDDSEVQ 114
Query: 331 TRMGMPPMKKKKVSPKETKIKAEPV-------------RRVMTN----EEKRILSTELEA 373
G P+ ++ + K + A V R++MT EEKR L L
Sbjct: 115 ANEGGVPVVEEIDTEKVIEQYALQVSLDCSQDCALSKCRKIMTRAMSVEEKRHLGQSLGR 174
Query: 374 LLEELPESIIDFL-KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANP 432
L + +I + +++ + DE+E+DIDA TL+ L++ + L +QA P
Sbjct: 175 LPPDNLSHVIQIIAQKNPSFNINSDEVEVDIDAQDPATLWRLQRYVQAVLSGSAARQATP 234
>gi|145347731|ref|XP_001418315.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578544|gb|ABO96608.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 610
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 118/227 (51%), Gaps = 15/227 (6%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI-TSGQYS 262
++ KQC + + +LM+H++G+ F+ PVD L +P Y +I PMDLGTIK I G+Y
Sbjct: 281 IVHKQCLSAVRQLMAHKWGFPFSAPVDPDALGLPTYREIITEPMDLGTIKKLIENGGKYV 340
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP-------VTVD 315
ADVRLTF+NAM +N DVH MA L +E +W+AI++++ V D
Sbjct: 341 MAEEVDADVRLTFANAMKFNNEGTDVHTMACGLLDEWEPKWEAIKQRIADVEACVLVERD 400
Query: 316 MT-----AVPSRADDMI-ETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILST 369
M A RAD + E E + + +E + + + R + E++ L++
Sbjct: 401 MAVAKNEAAQRRADVVSKEKECAKASEALDLVSMQLREVETQVLALMRPLQREDRLDLAS 460
Query: 370 ELEALLEELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRK 416
+L L E L D + ++ G + + LE DIDA ++ TL L +
Sbjct: 461 DLRCLPESLRSGAKDIIAANTTGWSAQAHLE-DIDAHNEITLHLLAR 506
>gi|348686369|gb|EGZ26184.1| hypothetical protein PHYSODRAFT_483048 [Phytophthora sojae]
Length = 2258
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 72/115 (62%)
Query: 198 ASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT 257
A+ S A L K+ E +L +M H+FGWVFNTPVD + LNIP+YF +I+ PMDLGT+K K+
Sbjct: 1261 ATVSPANLKKKLEVILKGMMDHKFGWVFNTPVDPVALNIPNYFKIIRKPMDLGTVKKKLE 1320
Query: 258 SGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
+G Y FA +VR TF NAM YN DV+ +A + F + + ++ V
Sbjct: 1321 AGIYKHTDEFANEVRTTFENAMQYNSEDQDVYSLAKDMLSDFNGEMRKVAAEIDV 1375
>gi|301112310|ref|XP_002905234.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262095564|gb|EEY53616.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 2294
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Query: 198 ASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT 257
A+ S A L K+ E L +M H+FGWVFNTPVD + LNIP+YF +++ PMDLGT+K K+
Sbjct: 1288 ATVSPANLKKKLEGTLRGMMEHKFGWVFNTPVDPVALNIPNYFKIVRKPMDLGTVKKKLE 1347
Query: 258 SGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMT 317
G Y FA DVR TF NAM YN DV+ +A + F + + + + VD T
Sbjct: 1348 LGIYKHTEEFAYDVRTTFQNAMQYNSEDQDVYSLAKDMLADFNSEMRKVVAE--IDVDET 1405
Query: 318 A 318
A
Sbjct: 1406 A 1406
>gi|330792873|ref|XP_003284511.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
gi|325085541|gb|EGC38946.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
Length = 1321
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 58/102 (56%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C +LL LM H F PVD L I DYF IK PMD GTIK I G Y
Sbjct: 647 VFKRCSDLLDELMEHPQAGPFLVPVDPYALGILDYFNFIKRPMDFGTIKNSIVGGVYHTI 706
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA DVRL FSNA YNPP N VHIMA TL FE ++ +
Sbjct: 707 DEFAEDVRLVFSNAKAYNPPANLVHIMAKTLEDLFEEKFPQV 748
>gi|145347283|ref|XP_001418103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578331|gb|ABO96396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 859
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 63/99 (63%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++++C +L H++ +F PVD K +PDYF +IK+PMD+GT+K K+ + Y +P
Sbjct: 271 MIRRCREVLIASKKHKYHKIFLVPVDPKKHGVPDYFDIIKNPMDMGTVKTKLDTKAYLNP 330
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F AD+RL FSN + YN +D +M +T+R+ FE W
Sbjct: 331 AEFCADMRLIFSNGLLYNGTASDAGVMTETVRQLFETAW 369
>gi|47212213|emb|CAF94980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ +L ++S + + W F PVD L + DY +IKHPMDL TI+ K+ G+YS
Sbjct: 287 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYS 346
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
+P +FA DVRL FSN YNPP ++V MA L+ FE+R+ I
Sbjct: 347 EPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 390
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KL + DY VIK+PMD+GTIK ++ + Y
Sbjct: 20 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSA 79
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 80 SGAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 114
>gi|224109720|ref|XP_002315289.1| global transcription factor group [Populus trichocarpa]
gi|222864329|gb|EEF01460.1| global transcription factor group [Populus trichocarpa]
Length = 318
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 19/246 (7%)
Query: 193 KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
K AA+ LM+Q +L ++ H++ W F PVDV L + DY+ VI PMD TI
Sbjct: 75 KREAAAAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLRLHDYYEVIDKPMDFSTI 134
Query: 253 KCKITSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
K ++ + Y + +ADVRL F NAM YN ++DVH+MA TL FE +W +
Sbjct: 135 KNQMEAKDGTGYKNVREISADVRLVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQL--- 191
Query: 310 LPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSP-----KETKIKAEPVR-------R 357
LP + + + + ++ K E + E +R R
Sbjct: 192 LPKVTEEEKRREDEEVEAKLDMQLAQEAAHAKMARDLSNELYEVDMHLEELRDIVVQKCR 251
Query: 358 VMTNEEKRILSTELEALL-EELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRK 416
M+ EEKR L L L E+L +++ + + + +E+++DIDA ++ TL+ L+
Sbjct: 252 KMSTEEKRKLGVALTRLSPEDLTKALEIVARSNPGFQATAEEVDLDIDAQTESTLWRLKF 311
Query: 417 LLDDYL 422
L+ D L
Sbjct: 312 LVKDVL 317
>gi|218195611|gb|EEC78038.1| hypothetical protein OsI_17470 [Oryza sativa Indica Group]
Length = 330
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+C+ +L +L + FN PV+V +L + DY VIK PMDLGT++ + +G+Y
Sbjct: 1 MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA----IEKKLPV----TVDM 316
FAAD+RLTFSNA+ YNP ++VH A L FE +KA E++L +
Sbjct: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVP 120
Query: 317 TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLE 376
A + + R G M+K K EP +R MT EEK + +
Sbjct: 121 PPELPPAKAPAQVKPRAGNVKMRKTKAR--------EPNKREMTLEEKNFVEGWIVRKRN 172
Query: 377 ELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDY--LLEKQQKQANPGP 434
PE + E+E+DID + +T + L + ++ + L K ++ A
Sbjct: 173 GNPELV-------------GGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIVNG 219
Query: 435 CEMEVLNESGLSNSSMQLCKG 455
+V++ S ++N S L G
Sbjct: 220 ENADVIDAS-VANDSDMLVNG 239
>gi|302782720|ref|XP_002973133.1| hypothetical protein SELMODRAFT_413595 [Selaginella moellendorffii]
gi|300158886|gb|EFJ25507.1| hypothetical protein SELMODRAFT_413595 [Selaginella moellendorffii]
Length = 585
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 58/302 (19%)
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTY 281
GWVF PV + + DY VI+ PMDLGT+K ++ S YS P FA DVRLTF NA+ +
Sbjct: 224 GWVFCQPVQSLWPELVDYTKVIEKPMDLGTVKSRVQSKYYSSPKGFARDVRLTFDNAIRF 283
Query: 282 NPPQNDVHIMADTLRKYFEVRWKAIEK------------KLPVTVDMTAVPSRAD----- 324
N + H +A +R+ FE +KA+E+ K+ V++ P R
Sbjct: 284 NAAGSMYHKLALKMRQKFETAFKAVERLYNRPPKPAAKSKIRPLVEVAPPPPRQKIEMVE 343
Query: 325 -----------------DMIETETRMGMPPMKKKKV---SPKETKIK------------- 351
+++E + ++ P + + + +PK K+K
Sbjct: 344 QKPVVAPVVEVIDVKQPEVLEVKEQVATPVSRARDLEFPAPKAKKVKLMGTNPRLGRQAN 403
Query: 352 --AEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGEDELEIDIDALSDD 409
A R+++ +EK LS +++ E+ +I+ + E G E+E+D+D L +
Sbjct: 404 SLAYGGCRLLSAKEKAKLSELVDSFPEDRMRKVIEIVGEKHPELVGAPEVELDLDKLDKN 463
Query: 410 TLFALRKLLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGN 469
TLF L +L ++ K + A + + E LS+ ++ N +++DIVG +
Sbjct: 464 TLFNLYRLAMNWQKSKNKVLAK---SKSSLTAEDSLSDGQQRMLMDN---SDNIDIVGLD 517
Query: 470 DP 471
P
Sbjct: 518 SP 519
>gi|440790347|gb|ELR11630.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2175
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 78/135 (57%), Gaps = 10/135 (7%)
Query: 172 APNGRNG----PQTKKGNSGR---LEPKKPAGAASSSNAMLMK--QCENLLTRLMSHQFG 222
AP G G P +G+ R LE P +S AM +K QC+ LL+RL H+
Sbjct: 13 APTGEQGRIRKPLRSEGHWEREPSLETTVPT-YSSGDVAMDLKLGQCQALLSRLKRHKHA 71
Query: 223 WVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYN 282
W FN PVD + L++PDY+ V+K PMDLGTI K+TSGQY+ F D+ L +SN + YN
Sbjct: 72 WPFNQPVDPVALDLPDYWEVVKRPMDLGTIGDKLTSGQYAKVSEFLDDLELVWSNCLLYN 131
Query: 283 PPQNDVHIMADTLRK 297
PP + + A LRK
Sbjct: 132 PPDDPISEWATLLRK 146
>gi|55296460|dbj|BAD68656.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
gi|55297001|dbj|BAD68476.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
Length = 360
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 62/285 (21%)
Query: 182 KKGNSGRLEPKKPAGAASSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDY 239
K G+ GR +K + S S M LM+Q ++ ++ SH++ F PVDV+ L + DY
Sbjct: 70 KHGSGGRKAGRKDS---SLSKGMPDLMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDY 126
Query: 240 FTVIKHPMDLGTIKCKITS---GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
+ +I PMD TI+ K+ +Y++ +DVRL F+NAM YN ++DVHIMA +L
Sbjct: 127 YKIITKPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLL 186
Query: 297 KYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRM-------GMPPMKKKKVSPKETK 349
+ FE +W + +P +E E R G+P K +SP+E
Sbjct: 187 EKFEEKW------------LQLLPK-----VENEERKQKDEESNGVP---KVNISPEEAI 226
Query: 350 IK---------------AEPVR-------RVMTNEEKRILSTELEALL-EELPESIIDFL 386
K E +R R MT EKR L L L EEL +++
Sbjct: 227 AKLAKDTDNELIEINKQLEELRQMVVQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVA 286
Query: 387 KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQAN 431
+++ + E DELE+D+DA S+ TL+ L+ + + L ++QAN
Sbjct: 287 QDNPSFEAKGDELELDMDAQSETTLWRLKFFVREAL----ERQAN 327
>gi|290985307|ref|XP_002675367.1| bromodomain-containing protein [Naegleria gruberi]
gi|284088963|gb|EFC42623.1| bromodomain-containing protein [Naegleria gruberi]
Length = 718
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ K+ + L+ + H++ W FN PVD ++L IPDYF VIK+PMDLGT++ K+ + +Y D
Sbjct: 183 IQKKLQKLMGIVKKHKWSWPFNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNNNEYMDV 242
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F DVR+ +SN YNP +D++ MA + KYF ++
Sbjct: 243 YQFLDDVRVIWSNCYLYNPVDSDIYKMAKEVEKYFNEKY 281
>gi|162135989|ref|NP_001085290.1| uncharacterized protein LOC443648 [Xenopus laevis]
gi|115313740|gb|AAI23909.1| LOC443648 protein [Xenopus laevis]
gi|159507463|gb|ABW97744.1| bromodomain 4 [Xenopus laevis]
Length = 1351
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGN--------SGRLEPKK-PAGAASSSN 202
PL ES PS P+ R NGR TKK L P+ P +
Sbjct: 309 PLHESSPLPSDPKPPRAVPRKENGRQIRPTKKTEVPDSQLPAPPVLHPQPAPNAERDTKT 368
Query: 203 AMLMKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
+ ++ C +++ + S HQ + W F PVDV L + DY +IKHPMDLGTIK K+ +
Sbjct: 369 SEQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENR 428
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y + FA+DVRL FSN YNPP ++V IMA L+ FE+R+
Sbjct: 429 DYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRF 472
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVDV+KLN+PDY +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|440293863|gb|ELP86910.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 358
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C+++L L + F +PVD + N+PDY+ VI PMDLGTI K+ G Y FA
Sbjct: 151 CKDILKTLKNLPEANPFLSPVDPIAQNLPDYYIVITEPMDLGTITKKLRMGVYDHIDDFA 210
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA-----------IEKKLPVTVDMT 317
ADVRLTF NAM YNPP+N VH+ A TL KYF+ + K +EK+ D
Sbjct: 211 ADVRLTFKNAMKYNPPRNMVHVFAKTLLKYFDDKIKELYHSKCTIHANVEKRHNYWNDKR 270
Query: 318 AVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEE 377
+ E + G+ M+ + P ++ EEK LS +LE +
Sbjct: 271 EWIDFQKSIFELQEEAGIAAMQTTQFLP-------------LSFEEKCDLSNKLEEVEGV 317
Query: 378 LPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLL 418
+ +++FL + A E ++ ID+D + D+ L AL ++
Sbjct: 318 KQQEVLEFLGKQDA----EGDVFIDLDDIDDEVLAALNSIV 354
>gi|224098028|ref|XP_002311109.1| global transcription factor group [Populus trichocarpa]
gi|222850929|gb|EEE88476.1| global transcription factor group [Populus trichocarpa]
Length = 370
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 19/245 (7%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---Y 261
LM+Q +L ++ H++ W F PVDV L + DY+ VI PMD TIK ++ + Y
Sbjct: 90 LMRQFGTILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 149
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPS 321
ADVRL F NAM YN ++DVH+MA TL FE +W LP +
Sbjct: 150 KSVREICADVRLVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQF---LPKVTEEEKRRE 206
Query: 322 RADDMIETETRMGMPPMKKKKVSP-----KETKIKAEPVR-------RVMTNEEKRILST 369
+ + + ++ K E + E +R R M+ EEKR L
Sbjct: 207 EEEAEAQLDMQLAQEAAHAKMARDLGNELYEVDMHLEELREMVVQKCRKMSTEEKRKLGA 266
Query: 370 ELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQK 428
L L E ++ + +++ G + +E+++DIDA S+ TL+ L+ + D L + +
Sbjct: 267 ALTRLSPEDLTKALEIVAQNNPGFQATAEEVDLDIDAQSETTLWRLKFFVKDALEVQGKS 326
Query: 429 QANPG 433
A+ G
Sbjct: 327 AASAG 331
>gi|349805091|gb|AEQ18018.1| hypothetical protein [Hymenochirus curtipes]
Length = 497
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+ W F PVDV L + DY +IKHPMDLGTIK K+ + +Y +P FAADVRL FSN
Sbjct: 114 YAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENREYKEPQEFAADVRLMFSNCYK 173
Query: 281 YNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
YNPP ++V IMA L+ FE+R+ + +L
Sbjct: 174 YNPPDHEVVIMARKLQDVFEMRFAKMPDEL 203
>gi|357517357|ref|XP_003628967.1| Global transcription factor group [Medicago truncatula]
gi|355522989|gb|AET03443.1| Global transcription factor group [Medicago truncatula]
Length = 365
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 30/255 (11%)
Query: 197 AASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
AA LM+Q +L ++ H++ W F PVDV L + DY+ +I PMD GTIK K+
Sbjct: 85 AAGKRMQELMRQFSTILRQITQHKWAWPFLEPVDVEGLGLHDYYEIIDKPMDFGTIKNKM 144
Query: 257 TSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP-- 311
+ Y + ADVRL F NAM YN ++DVH+MA TL + FE +W + K+
Sbjct: 145 EAKDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLMEKFEDKWLLLLPKVAEE 204
Query: 312 ----------VTVDM-----TAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVR 356
V +D+ T A D+ +G+ M E + K
Sbjct: 205 EKRQIEEEAQVQMDIHLAQETTYADMAKDLSNELNEVGIRLM--------EFREKVIQNC 256
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKE-HSAGETGEDELEIDIDALSDDTLFALR 415
R ++ EK+ L + L E + +D + E + + E+ DE+ +DI+A SD T++ L
Sbjct: 257 RKLSTGEKKALGKAIAKLSPENLQRALDLVAEINPSFESTADEVVLDINAQSDYTVWRLY 316
Query: 416 KLLDDYLLEKQQKQA 430
+ LE QQ A
Sbjct: 317 HFVKG-ALEGQQGTA 330
>gi|19171509|emb|CAC84085.1| hypothetical protein [Takifugu rubripes]
Length = 701
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ +L ++S + + W F PVD L + DY +IKHPMDL TI+ K+ G+Y+
Sbjct: 297 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYN 356
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
+P +FA DVRL FSN YNPP ++V MA L+ FE+R+ I
Sbjct: 357 EPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 400
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KL + DY VIK+PMD+GTIK ++ + Y
Sbjct: 36 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSA 95
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 96 SEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 130
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 359 MTNEEKRILSTELEALLEELPESIIDFL--KEHSAGETGEDELEIDIDALSDDTLFALRK 416
M+ +EKR LS ++ L E ++ + +E S ++ DE+EID + L TL L +
Sbjct: 551 MSYDEKRQLSLDINRLPGEKLGRVVHIIQTREPSLRDSNPDEIEIDFETLKPSTLRELER 610
Query: 417 LLDDYLLEKQQKQANPGPCEMEVLNESGLSNSSMQLCKGNDLVDEDVDIVGGND 470
+ L +KQ+K + C G + S+ G+DL + IVG ND
Sbjct: 611 YVKSCLQKKQRKLLHAFTC--------GSTTGSVWAVVGSDL----IIIVGLND 652
>gi|125553971|gb|EAY99576.1| hypothetical protein OsI_21551 [Oryza sativa Indica Group]
gi|125595985|gb|EAZ35765.1| hypothetical protein OsJ_20055 [Oryza sativa Japonica Group]
Length = 344
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 62/285 (21%)
Query: 182 KKGNSGRLEPKKPAGAASSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDY 239
K G+ GR +K + S S M LM+Q ++ ++ SH++ F PVDV+ L + DY
Sbjct: 54 KHGSGGRKAGRKDS---SLSKGMPDLMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDY 110
Query: 240 FTVIKHPMDLGTIKCKITS---GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
+ +I PMD TI+ K+ +Y++ +DVRL F+NAM YN ++DVHIMA +L
Sbjct: 111 YKIITKPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLL 170
Query: 297 KYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRM-------GMPPMKKKKVSPKETK 349
+ FE +W + +P +E E R G+P K +SP+E
Sbjct: 171 EKFEEKW------------LQLLPK-----VENEERKQKDEESNGVP---KVNISPEEAI 210
Query: 350 IK---------------AEPVR-------RVMTNEEKRILSTELEALL-EELPESIIDFL 386
K E +R R MT EKR L L L EEL +++
Sbjct: 211 AKLAKDTDNELIEINKQLEELRQMVVQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVA 270
Query: 387 KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQAN 431
+++ + E DELE+D+DA S+ TL+ L+ + + L ++QAN
Sbjct: 271 QDNPSFEAKGDELELDMDAQSETTLWRLKFFVREAL----ERQAN 311
>gi|325193402|emb|CCA27731.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 2004
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 63/99 (63%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LLT+LM + GW FN+PVD ++ NIPDYF +IK PMDLG IK ++ + Y+ AFAADV
Sbjct: 732 LLTKLMESEHGWAFNSPVDPVQWNIPDYFDIIKCPMDLGAIKKRLENEHYNSVDAFAADV 791
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
RL F N + YN N +I A L FE +I+ +L
Sbjct: 792 RLVFENCIAYNSSTNKFNIAAKQLLTQFEKNLTSIKSQL 830
>gi|432868098|ref|XP_004071410.1| PREDICTED: uncharacterized protein LOC101158947 [Oryzias latipes]
Length = 1443
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 209 CENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
C L+ ++S + + W F PVDV L + DY +IKHPMDL TIK K+ + QY DP
Sbjct: 360 CAALVREMLSKKHAAYAWPFYKPVDVDALGLHDYHDIIKHPMDLSTIKAKLENRQYRDPQ 419
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 420 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 457
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%)
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
L H F W F PVD +KLN+PDY+T+I PMDLGTIK ++ + Y + D F
Sbjct: 53 LWKHHFSWPFQAPVDAIKLNLPDYYTIIHTPMDLGTIKKRLENSYYWNAQECIQDFNTMF 112
Query: 276 SNAMTYNPPQNDVHIMADTLRKYF 299
+N YN P +D+ +MA+ L K F
Sbjct: 113 TNCYIYNKPGDDIVLMAEALEKVF 136
>gi|359486529|ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 440
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
AA+ LM+Q +L ++ H++ W F PVDV L + DY+ VI+ PMD TIK K
Sbjct: 148 AAAAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNK 207
Query: 256 ITS---GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
+ + Y + ADVRL F NAM YN + DVH+MA TL FE +W + LP
Sbjct: 208 MEAKDGAGYKNVREICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQL---LPK 264
Query: 313 TVDMTAVPSRADDMIETETRMGMPPMKKK---KVSPK--ETKIKAEPVRRVM-------T 360
+ + + + + K +S + E + + +R ++ +
Sbjct: 265 VAEEDKRREEEEAEAQLDMHLAQEAAHAKMARDISNELFEIDMHLDDIREIIVQKCRKTS 324
Query: 361 NEEKRILSTELEAL-LEELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLD 419
EEKR L L L E+L +++ + + + + +E+ +DIDA + TL+ L+ +
Sbjct: 325 TEEKRKLGAALSRLSAEDLSKALEIVAQSNPSFQATAEEVHLDIDAQRESTLWRLKFFVK 384
Query: 420 DYL 422
D L
Sbjct: 385 DAL 387
>gi|388517871|gb|AFK46997.1| unknown [Lotus japonicus]
Length = 89
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 72/92 (78%), Gaps = 3/92 (3%)
Query: 687 MEKTVDINENSRFMEDLEMLRIAQDEQLPSFTAEASPDHLQDRLGSFKFQGSTNPLEQLG 746
MEKTV+INE+S+F+EDLEML D+ PSF E SPDH ++ LGSFK QG NPLEQLG
Sbjct: 1 MEKTVEINESSQFLEDLEMLSAVHDDITPSFKEETSPDHPENELGSFKLQG--NPLEQLG 58
Query: 747 LYMKMDDDDEEEVEPPLTAKEPIKDVEEGEID 778
LYMK+D++DEEE PP +A P KDVEEGEID
Sbjct: 59 LYMKVDEEDEEEELPP-SAAGPSKDVEEGEID 89
>gi|255577689|ref|XP_002529721.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223530823|gb|EEF32687.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 391
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 19/246 (7%)
Query: 193 KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
K AAS LM+Q +L ++ H++ W F PVDV L + DY+ VI PMD TI
Sbjct: 96 KREAAASKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTI 155
Query: 253 KCKITSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
K ++ + Y + ADVRL F NAM YN ++DVH+MA TL FE +W +
Sbjct: 156 KNQMETKDGTGYKNVREICADVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL--- 212
Query: 310 LPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSP-----KETKIKAEPVR-------R 357
LP + + + + ++ + K E + +R R
Sbjct: 213 LPKVTEEEKRREMEEAEAQLDMQLAQEAVHAKMARELSNELYEIDTHLDELRDMVVQKCR 272
Query: 358 VMTNEEKRILSTELEALLEELPESIIDFLKEHSAG-ETGEDELEIDIDALSDDTLFALRK 416
++ EEKR L L L E ++ + +++ G + +E+++DIDA ++ TL+ L+
Sbjct: 273 KISTEEKRKLGAALTRLSPEDLTKALEIVAQNNPGFQATAEEVDLDIDAQTESTLWRLKF 332
Query: 417 LLDDYL 422
+ D L
Sbjct: 333 FVKDAL 338
>gi|224013522|ref|XP_002296425.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968777|gb|EED87121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1718
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%)
Query: 201 SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
S A L +C +L L H+ GWVF TPVD ++L + DYF VIK PMDLGTI ++ +G
Sbjct: 827 SPAKLKLKCVEILRELQIHEHGWVFATPVDPVELGLDDYFDVIKKPMDLGTISRRLDNGS 886
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
Y F +DVRLTF NAM YN + VH MA L+K F+ +K + K+L
Sbjct: 887 YHAFDDFKSDVRLTFENAMKYNDENSVVHEMAKELKKKFDTDYKKLMKQL 936
>gi|183232851|ref|XP_651394.2| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|169801846|gb|EAL46008.2| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707679|gb|EMD47300.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 315
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 115/214 (53%), Gaps = 7/214 (3%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+++C+ L +LM+ FNTPVD + L +P YF+VIK PMDLGTIK ++ +Y
Sbjct: 27 LRKCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKYITKE 86
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK-AIEKKLPVTVDMTAVPSRAD 324
F AD+ L F NA+ +N P ++V+ A L+K FE WK A ++K PV T V S D
Sbjct: 87 EFQADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKNAFKEKKPVDTK-TNVTSHND 145
Query: 325 DMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIID 384
+ + E + KK + K +P +T EE L ++L+ +E+ + +I+
Sbjct: 146 TLNKVEEKKPEVSNSKKTRASSRKKNTNKP----LTKEEMIKLRSDLKQ-IEKNKDKLIE 200
Query: 385 FLKEHSAGETGEDELEIDIDALSDDTLFALRKLL 418
L + G++E+ +D+ + L L+++L
Sbjct: 201 VLAVVNVDSKGKNEVSLDLSKYTTQQLRELQRIL 234
>gi|354487577|ref|XP_003505948.1| PREDICTED: bromodomain-containing protein 2-like [Cricetulus
griseus]
gi|344253000|gb|EGW09104.1| Bromodomain-containing protein 2 [Cricetulus griseus]
Length = 752
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV +MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVVMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|218188757|gb|EEC71184.1| hypothetical protein OsI_03067 [Oryza sativa Indica Group]
Length = 264
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+ +C LL +L+ H+ GWVF PVD L + DY+ I PMDLGT++ ++ Y+DP
Sbjct: 53 LLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRCYADPW 112
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
AFAADVRLTF+NAM+YN + V+ A L + FE W ++
Sbjct: 113 AFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSV 153
>gi|403261526|ref|XP_003923169.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 680
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK------LPVTVDM 316
D FAADVRL FSN YNPP +DV MA L+ FE R+ + + LPV+
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVS--- 346
Query: 317 TAVP 320
TA+P
Sbjct: 347 TAIP 350
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 53
>gi|66912019|gb|AAH97528.1| LOC443648 protein, partial [Xenopus laevis]
Length = 572
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGN--------SGRLEPKK-PAGAASSSN 202
PL ES PS P+ R NGR TKK L P+ P +
Sbjct: 309 PLHESSPLPSDPKPPRAVPRKENGRQIRPTKKTEVPDSQLPAPPVLHPQPAPNAERDTKT 368
Query: 203 AMLMKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
+ ++ C +++ + S HQ + W F PVDV L + DY +IKHPMDLGTIK K+ +
Sbjct: 369 SEQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENR 428
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y + FA+DVRL FSN YNPP ++V IMA L+ FE+R+
Sbjct: 429 DYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRF 472
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVDV+KLN+PDY +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|431898968|gb|ELK07338.1| Bromodomain-containing protein 3 [Pteropus alecto]
Length = 756
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ CE++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 342 LRHCESILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 401
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 402 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 442
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 31/125 (24%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIP--------------------------- 237
++ +N++ + L HQF W F PVD +KLN+P
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPVSARPTPLLQLPGGAAPTLAEVLPEMW 98
Query: 238 ---DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADT 294
DY +IK+PMD+GTIK ++ + Y D F+N YN P +D+ +MA
Sbjct: 99 LVRDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 158
Query: 295 LRKYF 299
L K F
Sbjct: 159 LEKIF 163
>gi|49118460|gb|AAH73443.1| LOC443648 protein, partial [Xenopus laevis]
Length = 559
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGN--------SGRLEPKK-PAGAASSSN 202
PL ES PS P+ R NGR TKK L P+ P +
Sbjct: 309 PLHESSPLPSDPKPPRAVPRKENGRQIRPTKKTEVPDSQLPAPPVLHPQPAPNAERDTKT 368
Query: 203 AMLMKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
+ ++ C +++ + S HQ + W F PVDV L + DY +IKHPMDLGTIK K+ +
Sbjct: 369 SEQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENR 428
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y + FA+DVRL FSN YNPP ++V IMA L+ FE+R+
Sbjct: 429 DYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRF 472
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVDV+KLN+PDY +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|351697075|gb|EHA99993.1| Bromodomain testis-specific protein [Heterocephalus glaber]
Length = 832
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L ++S + + W F++PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 226 LKHCNEILKEMLSKKHFSYAWPFHSPVDVNALGLHNYYDIVKNPMDLGTIKKKMDNQEYK 285
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YN P +D+ MA TL+ FEV + I
Sbjct: 286 DAYEFAADVRLMFMNCYKYNSPDHDIVAMAKTLQDVFEVHFAKI 329
>gi|303285596|ref|XP_003062088.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226456499|gb|EEH53800.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 476
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI-TSGQYS 262
++ KQC + ++MSH++ + F PVD L + +Y ++K PMDLGT++ I G Y+
Sbjct: 63 IVSKQCLASVKQVMSHKWSFPFVKPVDAAALGLENYHDIVKQPMDLGTVRANIEKGGVYA 122
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP-VTVDMTA 318
DV LTF+NAM YN Q DVH+MA TL++++E RW I++K+ V MTA
Sbjct: 123 ACEEVNRDVELTFANAMLYNGAQTDVHVMAATLKQFWEPRWAVIQEKVAEVDESMTA 179
>gi|291398522|ref|XP_002715912.1| PREDICTED: Bromodomain testis-specific protein-like [Oryctolagus
cuniculus]
Length = 953
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ S QY
Sbjct: 270 LRHCSEILKEMLAKKHLPYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDSHQYK 329
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA TL+ FE+ + I
Sbjct: 330 DACEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFARI 373
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 11 VNPPPPEFINTKKNGRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIK 70
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
PMDL TIK ++ + Y D FSN YN P +D+ +MA TL K F
Sbjct: 71 SPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQTLEKLF 125
>gi|297597282|ref|NP_001043715.2| Os01g0648700 [Oryza sativa Japonica Group]
gi|55296880|dbj|BAD68333.1| PSTVd RNA-biding protein-like [Oryza sativa Japonica Group]
gi|255673505|dbj|BAF05629.2| Os01g0648700 [Oryza sativa Japonica Group]
Length = 238
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 66/101 (65%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+ +C LL +L+ H+ GWVF PVD L + DY+ I PMDLGT++ ++ +Y+DP
Sbjct: 53 LLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPW 112
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
AFAADVRLTF+NAM+YN + V+ A L + FE W ++
Sbjct: 113 AFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSV 153
>gi|296086052|emb|CBI31493.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
AA+ LM+Q +L ++ H++ W F PVDV L + DY+ VI+ PMD TIK K
Sbjct: 70 AAAAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNK 129
Query: 256 ITS---GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
+ + Y + ADVRL F NAM YN + DVH+MA TL FE +W + LP
Sbjct: 130 MEAKDGAGYKNVREICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQL---LPK 186
Query: 313 TVDMTAVPSRADDMIETETRMGMPPMKKK---KVSPK--ETKIKAEPVRRVM-------T 360
+ + + + + K +S + E + + +R ++ +
Sbjct: 187 VAEEDKRREEEEAEAQLDMHLAQEAAHAKMARDISNELFEIDMHLDDIREIIVQKCRKTS 246
Query: 361 NEEKRILSTELEAL-LEELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLD 419
EEKR L L L E+L +++ + + + + +E+ +DIDA + TL+ L+ +
Sbjct: 247 TEEKRKLGAALSRLSAEDLSKALEIVAQSNPSFQATAEEVHLDIDAQRESTLWRLKFFVK 306
Query: 420 DYL 422
D L
Sbjct: 307 DAL 309
>gi|395832116|ref|XP_003789122.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Otolemur
garnettii]
Length = 680
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 330
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 1 MDMGTIKRRLENSYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 53
>gi|440904692|gb|ELR55166.1| Bromodomain-containing protein 3, partial [Bos grunniens mutus]
Length = 613
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 241 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 300
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 301 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 341
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DY +IK+PMD+GTIK ++ + Y D F+N YN P +D+ +MA L K
Sbjct: 1 DYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEK 60
Query: 298 YF 299
F
Sbjct: 61 IF 62
>gi|148232443|ref|NP_001086546.1| bromodomain containing 4 [Xenopus laevis]
gi|49899749|gb|AAH76786.1| Brd4-prov protein [Xenopus laevis]
Length = 1362
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRN--------GPQTKKGNSGRLEPKK-PAGAASSSN 202
PL ES PS PK R +GR P ++ L P+ P S
Sbjct: 308 PLHESSPLPSDPKPPKAGPRKESGRQIRPIKKTEVPDSQLPAPPDLHPQPAPIAEKDSKT 367
Query: 203 AMLMKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
+ ++ C ++ + S HQ + W F PVDV L + DY +IKHPMDLGTIK K+ +
Sbjct: 368 SEQLRYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENC 427
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y + FA+DVRL FSN YNPP ++V IMA L+ FE+R+
Sbjct: 428 DYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRF 471
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ +L L HQF W F PVDV+KLN+PDY+ +IK PMD+GTIK ++ + Y +
Sbjct: 67 KTVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIKKRLENHFYWNAQECIQ 126
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA+ L K F
Sbjct: 127 DFNTMFTNCYIYNKPGDDIVLMAEALEKLF 156
>gi|14164429|dbj|BAB55682.1| P0047B08.5 [Oryza sativa Japonica Group]
Length = 370
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 66/101 (65%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+ +C LL +L+ H+ GWVF PVD L + DY+ I PMDLGT++ ++ +Y+DP
Sbjct: 178 LLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPW 237
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
AFAADVRLTF+NAM+YN + V+ A L + FE W ++
Sbjct: 238 AFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSV 278
>gi|159507460|gb|ABW97743.1| bromodomain 4 [Xenopus laevis]
Length = 1366
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGR--------NGPQTKKGNSGRLEPKK-PAGAASSSN 202
PL ES PS PK R +GR P ++ L P+ P S
Sbjct: 308 PLHESSPLPSDPKPPKAGPRKESGRPIRPIKKTEVPDSQLPAPPDLHPQPAPIAEKDSKT 367
Query: 203 AMLMKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
+ ++ C ++ + S HQ + W F PVDV L + DY +IKHPMDLGTIK K+ +
Sbjct: 368 SEQLRYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENC 427
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y + FA+DVRL FSN YNPP ++V IMA L+ FE+R+
Sbjct: 428 DYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRF 471
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ +L L HQF W F PVDV+KLN+PDY+ +IK PMD+GTIK ++ + Y +
Sbjct: 67 KTVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIKKRLENHFYWNAQECIQ 126
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA+ L K F
Sbjct: 127 DFNTMFTNCYIYNKPGDDIVLMAEALEKLF 156
>gi|147779795|emb|CAN62295.1| hypothetical protein VITISV_019973 [Vitis vinifera]
Length = 377
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 27/288 (9%)
Query: 170 KRAPNGRNGPQTKKGNSGRLEPKKPA--------GAASSSNAMLMKQCENLLTRLMSHQF 221
KR NG G K + K AA+ LM+Q +L ++M H++
Sbjct: 56 KRQLNGYKGSSVLKDKERHVASAKKQQQDASRREAAAAKRMQELMRQFGTILRQIMQHKW 115
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---YSDPLAFAADVRLTFSNA 278
F PVDV L + DY+ VI PMD TIK ++ + Y + ADVRL F NA
Sbjct: 116 AGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNA 175
Query: 279 MTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPM 338
M YN ++DVH+MA TL FE +W + LP + + + + ++
Sbjct: 176 MKYNDERHDVHVMAKTLLGKFEEKWLQL---LPKVAEEEKRREEEEAEAQLDMQLAQEAA 232
Query: 339 KKK---KVSPKETKI--KAEPVR-------RVMTNEEKRILSTELEAL-LEELPESIIDF 385
K ++S + I E VR R M+ EEKR L L L E+L +++
Sbjct: 233 HAKMAREISNELYXIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIV 292
Query: 386 LKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPG 433
+ + + + +E+++DIDA ++ TL+ L+ + D L + + A+ G
Sbjct: 293 AQNNPSFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKG 340
>gi|67483926|ref|XP_657183.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56474427|gb|EAL51797.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704936|gb|EMD45090.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 485
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +L L F TPVD + N+PDY+ VI HPMDL TI K G Y FA
Sbjct: 275 CRQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFA 334
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI---EKKLPVTVDMTAVPSRADD 325
DVRL F NAM YNPP+N +HI A TL +YF+ + K I + + V + D
Sbjct: 335 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQIKEIYDCRRSIKVIFNQDEHNYWNDQ 394
Query: 326 MIETETRMGMPPMKKKK-VSPKETKIKAEPVRRV-MTNEEKRILSTELEALLEELPESII 383
+ + + +K+++ + P +K E R + ++ EEK LS LE + E ++
Sbjct: 395 REWMDFKQSIEELKEEQGILP----LKMEEERVIPLSFEEKIELSKRLEEVEGAKQEEVL 450
Query: 384 DFLKEHSAGETGEDELEIDIDALSDDTLFALRKLL 418
+LK + E E+EI + L++ L L K++
Sbjct: 451 KYLK----IDKDEGEIEIKFETLNEQDLIMLNKIV 481
>gi|417404059|gb|JAA48805.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 707
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L L+S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 294 LRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 353
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 354 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 394
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNP-----PQNDVHIM 291
D F+N YN PQ +V ++
Sbjct: 99 SECMQDFNTMFTNCYIYNKKVAQMPQEEVELL 130
>gi|410958888|ref|XP_003986045.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Felis catus]
Length = 684
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 330
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 53
>gi|332823728|ref|XP_001167922.2| PREDICTED: bromodomain-containing protein 2 isoform 7 [Pan
troglodytes]
Length = 680
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 330
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 53
>gi|417404197|gb|JAA48868.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 725
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L L+S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|297661253|ref|XP_002809177.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Pongo
abelii]
Length = 681
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 330
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 53
>gi|426352679|ref|XP_004043837.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Gorilla
gorilla gorilla]
gi|52545711|emb|CAH56208.1| hypothetical protein [Homo sapiens]
gi|119624067|gb|EAX03662.1| bromodomain containing 2, isoform CRA_a [Homo sapiens]
Length = 681
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 330
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 53
>gi|441594234|ref|XP_004092963.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Nomascus leucogenys]
Length = 682
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK------LPVTVDM 316
D FAADVRL FSN YNPP +DV MA L+ FE R+ + + LPV+ M
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTAM 349
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
MD+GTIK ++ + Y D F+N YN P +D+ +MA TL K F + ++
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 307 ---EKKLPVTV 314
E++L VT+
Sbjct: 61 PQEEQELAVTI 71
>gi|440473196|gb|ELQ42011.1| hypothetical protein OOU_Y34scaffold00240g18 [Magnaporthe oryzae
Y34]
gi|440484338|gb|ELQ64424.1| hypothetical protein OOW_P131scaffold00625g16 [Magnaporthe oryzae
P131]
Length = 1000
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 206 MKQCENLLTRLM---SHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L L SH W+F PVD + P Y+++IK PMDLGT+ K+ G+Y
Sbjct: 574 LKYCDDILKDLAKPKSHGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGKYR 633
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
F AD L +N T+NP DVH +A L YF+ +W I+
Sbjct: 634 SAADFKADFDLMLNNCFTFNPAGTDVHALARNLEAYFQDKWAGID 678
>gi|407044057|gb|EKE42339.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 485
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +L L F TPVD + N+PDY+ VI HPMDL TI K G Y FA
Sbjct: 275 CRQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFA 334
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI---EKKLPVTVDMTAVPSRADD 325
DVRL F NAM YNPP+N +HI A TL +YF+ + K I + + V + D
Sbjct: 335 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQIKEIYDCRRSIKVIFNQDEHNYWNDQ 394
Query: 326 MIETETRMGMPPMKKKK-VSPKETKIKAEPVRRV-MTNEEKRILSTELEALLEELPESII 383
+ + + +K+++ + P +K E R + ++ EEK LS LE + E ++
Sbjct: 395 REWMDFKQSIEELKEEQGILP----LKMEEERVIPLSFEEKIELSKRLEEVEGAKQEEVL 450
Query: 384 DFLKEHSAGETGEDELEIDIDALSDDTLFALRKLL 418
+LK + E E+EI + L++ L L K++
Sbjct: 451 KYLK----IDKDEGEIEIKFETLNEQDLIMLNKIV 481
>gi|389632607|ref|XP_003713956.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
gi|351646289|gb|EHA54149.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
Length = 1021
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 206 MKQCENLLTRLM---SHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L L SH W+F PVD + P Y+++IK PMDLGT+ K+ G+Y
Sbjct: 595 LKYCDDILKDLAKPKSHGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGKYR 654
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
F AD L +N T+NP DVH +A L YF+ +W I+
Sbjct: 655 SAADFKADFDLMLNNCFTFNPAGTDVHALARNLEAYFQDKWAGID 699
>gi|444519083|gb|ELV12566.1| Bromodomain-containing protein 2 [Tupaia chinensis]
Length = 743
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 290 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 349
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 350 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 390
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 72 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 127
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 128 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 176
>gi|222618950|gb|EEE55082.1| hypothetical protein OsJ_02819 [Oryza sativa Japonica Group]
Length = 264
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 66/101 (65%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+ +C LL +L+ H+ GWVF PVD L + DY+ I PMDLGT++ ++ +Y+DP
Sbjct: 53 LLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPW 112
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
AFAADVRLTF+NAM+YN + V+ A L + FE W ++
Sbjct: 113 AFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSV 153
>gi|1588281|prf||2208296A RING3 protein
Length = 509
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 29/259 (11%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKH 245
L P PA S ++ C +L L+S + + W F PVD L + DY +IKH
Sbjct: 173 LAPGSPASPPGS-----LEPCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH 227
Query: 246 PMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-- 303
PMDL T+K K+ + Y D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 228 PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAK 287
Query: 304 --------KAIEKKLPVT----VDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIK 351
+A+ ++L + + + PP P +
Sbjct: 288 MPDEPEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAKTAPP-----ALPTGYDSE 342
Query: 352 AEPVRRVMTNEEKRILSTELEALLEELPESIIDFL--KEHSAGETGEDELEIDIDALSDD 409
E R M+ +EKR LS ++ L E ++ + +E S ++ +E+EID + L
Sbjct: 343 EEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPS 402
Query: 410 TLFALRKLLDDYLLEKQQK 428
TL L + + L +K +K
Sbjct: 403 TLRELERYVLSCLRKKPRK 421
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|24210305|emb|CAD54663.1| bromodomain containing 2 [Danio rerio]
Length = 806
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + W F PVDV L + DY+ +I +PMDL TIK K+ +Y
Sbjct: 375 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 434
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D L FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 435 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRF 475
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCE----NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
P +PA S + Q + L+ L H F W F+ PVD KLN+PDY+ +IK P
Sbjct: 48 PPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQP 107
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA +L K F
Sbjct: 108 MDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAF 160
>gi|396080310|ref|NP_001257500.1| bromodomain-containing protein 2 isoform 2 [Danio rerio]
gi|94732369|emb|CAK04960.1| bromodomain-containing 2 [Danio rerio]
gi|190337777|gb|AAI63905.1| Bromodomain-containing 2a [Danio rerio]
gi|190339055|gb|AAI63902.1| Bromodomain-containing 2a [Danio rerio]
Length = 832
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + W F PVDV L + DY+ +I +PMDL TIK K+ +Y
Sbjct: 384 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 443
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D L FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 444 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRF 484
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
Query: 134 VVLSPSSD--IRSCNDGQKRPLLE-SVGGPSVVLAPKGKK-RAPN----GRNGPQTKK-G 184
LSP D + C+ Q ++E ++ GP GK+ R P+ G GP
Sbjct: 3 TALSPPFDSSLGGCDGMQGLTMMEQTISGP-------GKRIRKPSLLYEGFEGPALPHIA 55
Query: 185 NSGRLEP--KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTV 242
SG +P + P+ +N + Q + L+ L H F W F+ PVD KLN+PDY+ +
Sbjct: 56 QSGPPQPAVRDPSRQGRMTNQLQFLQ-KALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNI 114
Query: 243 IKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
IK PMD+GTIK ++ + Y D F+N YN P +D+ +MA +L K F
Sbjct: 115 IKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAF 171
>gi|397609097|gb|EJK60217.1| hypothetical protein THAOC_19472 [Thalassiosira oceanica]
Length = 1735
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L +C +L L +H+ GWVF+TPV+ ++L + DYF +IK PMDLGTI K+ G Y
Sbjct: 857 LKSKCGEILKSLQNHENGWVFSTPVNPVELGLDDYFDIIKKPMDLGTIGKKLEQGSYHSF 916
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
F +DVRLTF NAM YN Q VH MA +K F+ +K + K L
Sbjct: 917 DEFKSDVRLTFENAMKYNEEQTVVHEMAKGFKKKFDEDYKKMLKSL 962
>gi|296197845|ref|XP_002746465.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Callithrix
jacchus]
Length = 800
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK------LPVTVDM 316
D FAADVRL FSN YNPP +DV MA L+ FE R+ + + LPV+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVS--- 466
Query: 317 TAVP 320
TA+P
Sbjct: 467 TAIP 470
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|301118949|ref|XP_002907202.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105714|gb|EEY63766.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 786
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 61/101 (60%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
M MK+C ++L LM++ F PVD + L IPDYF VIK PMDLGTI+ + SG Y
Sbjct: 275 MSMKKCLSILKGLMANPKAAPFMAPVDPVALGIPDYFHVIKEPMDLGTIRNNLESGFYDS 334
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
P FA VRLTF NA YN + VHI A L FE R+K
Sbjct: 335 PSDFAEHVRLTFRNATLYNAAHSQVHIYARKLVDDFEKRFK 375
>gi|396080308|ref|NP_571275.2| bromodomain-containing protein 2 isoform 1 [Danio rerio]
gi|157280793|gb|ABV29329.1| bromodomain-containing protein 2a [Danio rerio]
Length = 836
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + W F PVDV L + DY+ +I +PMDL TIK K+ +Y
Sbjct: 384 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 443
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D L FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 444 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRF 484
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
Query: 134 VVLSPSSD--IRSCNDGQKRPLLE-SVGGPSVVLAPKGKK-RAPN----GRNGPQTKK-G 184
LSP D + C+ Q ++E ++ GP GK+ R P+ G GP
Sbjct: 3 TALSPPFDSSLGGCDGMQGLTMMEQTISGP-------GKRIRKPSLLYEGFEGPALPHIA 55
Query: 185 NSGRLEP--KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTV 242
SG +P + P+ +N + Q + L+ L H F W F+ PVD KLN+PDY+ +
Sbjct: 56 QSGPPQPAVRDPSRQGRMTNQLQFLQ-KALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNI 114
Query: 243 IKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
IK PMD+GTIK ++ + Y D F+N YN P +D+ +MA +L K F
Sbjct: 115 IKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAF 171
>gi|157280791|gb|ABV29328.1| bromodomain-containing protein 2a [Danio rerio]
Length = 838
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + W F PVDV L + DY+ +I +PMDL TIK K+ +Y
Sbjct: 386 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 445
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D L FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 446 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRF 486
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
Query: 134 VVLSPSSD--IRSCNDGQKRPLLE-SVGGPSVVLAPKGKK-RAPN----GRNGPQTKK-G 184
LSP D + C+ Q ++E ++ GP GK+ R P+ G GP
Sbjct: 3 TALSPPFDSSLGGCDGMQGLTMMEQTISGP-------GKRIRKPSLLYEGFEGPALPHIA 55
Query: 185 NSGRLEP--KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTV 242
SG +P + P+ +N + Q + L+ L H F W F+ PVD KLN+PDY+ +
Sbjct: 56 QSGPPQPAVRDPSRQGRMTNQLQFLQ-KALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNI 114
Query: 243 IKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
IK PMD+GTIK ++ + Y D F+N YN P +D+ +MA +L K F
Sbjct: 115 IKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAF 171
>gi|149732108|ref|XP_001496282.1| PREDICTED: bromodomain-containing protein 2-like [Equus caballus]
Length = 804
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|410919159|ref|XP_003973052.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 590
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L ++S + W F +PVDV+ L + DY +IK PMDL TI+ K+ G+Y+
Sbjct: 272 LKCCSGVLKEMLSKRHYACAWPFYSPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGEYA 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
P FAADVRL FSN YNPP ++V MA L++ FE R+ + V + + P
Sbjct: 332 QPAEFAADVRLMFSNCYKYNPPSHEVVHMARKLQEVFEARY------VKVPQEASYFPHP 385
Query: 323 ADDMIETETRMGM 335
D + ET +GM
Sbjct: 386 CSDRAQGET-VGM 397
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 165 APKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR-LMSHQFGW 223
A G+ R N P + N PK+P + N + E ++ + L H F W
Sbjct: 24 AAPGRLRPSTSGNPPPPEASN-----PKRPGRVTNQLNYL-----EKVVIKALWRHHFSW 73
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNP 283
F PVD + L +PDY+TVI +PMDL TI ++ + Y L D+ FSN YN
Sbjct: 74 PFQRPVDAVALGLPDYYTVITNPMDLSTIMMRLKNKYYWQALECIQDLNTMFSNCYVYNQ 133
Query: 284 PQNDVHIMADTLRK 297
P + + MA TL K
Sbjct: 134 PGDGIVFMAQTLEK 147
>gi|351703550|gb|EHB06469.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 798
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 68 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 124 TIKRRLENTYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|167381013|ref|XP_001735535.1| bromodomain-containing factor [Entamoeba dispar SAW760]
gi|165902414|gb|EDR28252.1| bromodomain-containing factor, putative [Entamoeba dispar SAW760]
Length = 388
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+++C+ L +LM+ FNTPVD + L +P YF+VIK PMDLGTIK ++ +Y
Sbjct: 100 LRKCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKYITKE 159
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADD 325
F AD+ L F NA+ +N P ++V+ A L+K FE WK K+ T+ S D
Sbjct: 160 EFQADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKNAFKEKKTGDTKTSTTSHNDT 219
Query: 326 MIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDF 385
+ + E + KK + K +P +T EE L ++L+ +E+ + +I+
Sbjct: 220 LNKVEEKKSEVSNSKKTRASSRKKNTNKP----LTKEEMIKLRSDLKQ-IEKNKDKLIEV 274
Query: 386 LKEHSAGETGEDELEIDIDALSDDTLFALRKLL 418
L + G++E+ +D+ + L L+++L
Sbjct: 275 LAVVNVDSKGKNEVSLDLSKYTTQQLRELQRIL 307
>gi|403261524|ref|XP_003923168.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 800
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK------LPVTVDM 316
D FAADVRL FSN YNPP +DV MA L+ FE R+ + + LPV+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVS--- 466
Query: 317 TAVP 320
TA+P
Sbjct: 467 TAIP 470
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|344298832|ref|XP_003421095.1| PREDICTED: bromodomain-containing protein 2 [Loxodonta africana]
Length = 798
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|73967596|ref|XP_858014.1| PREDICTED: bromodomain-containing protein 3 isoform 3 [Canis lupus
familiaris]
Length = 728
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 194 PAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
PA +N + Q N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTI
Sbjct: 29 PAKPGRKTNQLQYMQ--NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTI 86
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K ++ + Y D F+N YN P +D+ +MA L K F
Sbjct: 87 KKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|355561582|gb|EHH18214.1| hypothetical protein EGK_14770 [Macaca mulatta]
Length = 862
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 410 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 469
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK------LPVTVDM 316
D FAADVRL FSN YNPP +DV MA L+ FE R+ + + LPV+ M
Sbjct: 470 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTAM 529
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 129 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 184
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + D+ F+N YN P +D+ +MA TL K F
Sbjct: 185 TIKRRLENSYCWAASECMEDLNTMFTNCYIYNKPTDDIVLMAQTLEKIF 233
>gi|296482055|tpg|DAA24170.1| TPA: bromodomain containing protein 3 [Bos taurus]
Length = 722
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 194 PAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
PA +N + Q N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTI
Sbjct: 29 PAKPGRKTNQLQYMQ--NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTI 86
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K ++ + Y D F+N YN P +D+ +MA L K F
Sbjct: 87 KKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|395832114|ref|XP_003789121.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Otolemur
garnettii]
Length = 791
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 341 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 400
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 401 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 441
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 60 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 115
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 116 TIKRRLENSYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 164
>gi|327288352|ref|XP_003228892.1| PREDICTED: bromodomain-containing protein 3-like [Anolis
carolinensis]
Length = 734
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 316 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 375
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 376 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 416
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 194 PAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
PA +N + Q N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTI
Sbjct: 25 PAKPGRKTNQLQYMQ--NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTI 82
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K ++ Y D F+N YN P +D+ +MA L K F
Sbjct: 83 KKRLEHNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|116003963|ref|NP_001070341.1| bromodomain-containing protein 3 [Bos taurus]
gi|115305162|gb|AAI23579.1| Bromodomain containing 3 [Bos taurus]
Length = 722
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|379642603|ref|NP_001243832.1| bromodomain containing 3 [Xenopus (Silurana) tropicalis]
Length = 795
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL ++K K+ + +Y+
Sbjct: 364 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDAREYA 423
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D AFAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 424 DAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 464
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN +D+ +MA L K F
Sbjct: 95 NECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIF 129
>gi|449478032|ref|XP_002199360.2| PREDICTED: bromodomain-containing protein 3 [Taeniopygia guttata]
Length = 722
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ +
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYFWSS 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D + YN P +D+ +MA L K F
Sbjct: 95 SECMQDFNTVLQSCYIYNKPTDDIVLMAQALEKIF 129
>gi|194225997|ref|XP_001917930.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 3
[Equus caballus]
Length = 728
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 194 PAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
PA +N + Q N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTI
Sbjct: 29 PAKPGRKTNQLQYMQ--NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTI 86
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K ++ + Y D F+N YN P +D+ +MA L K F
Sbjct: 87 KKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|114052340|ref|NP_001039331.1| bromodomain-containing protein 2 [Bos taurus]
gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full=Bromodomain-containing protein 2
gi|63169167|gb|AAY34703.1| bromodomain containing 2 [Bos taurus]
gi|296474561|tpg|DAA16676.1| TPA: bromodomain-containing protein 2 [Bos taurus]
Length = 803
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|348576418|ref|XP_003473984.1| PREDICTED: bromodomain-containing protein 2 [Cavia porcellus]
Length = 802
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 68 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 124 TIKRRLENTYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|410958884|ref|XP_003986043.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Felis catus]
gi|410958886|ref|XP_003986044.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Felis catus]
Length = 804
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|359484096|ref|XP_003633062.1| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 377
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 27/288 (9%)
Query: 170 KRAPNGRNGPQTKKGNSGRLEPKKPA--------GAASSSNAMLMKQCENLLTRLMSHQF 221
KR NG G K + K AA LM+Q +L ++M H++
Sbjct: 56 KRQLNGYKGSSVLKDKERHVASAKKQQQDASRREAAAVKRMQELMRQFGTILRQIMQHKW 115
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---YSDPLAFAADVRLTFSNA 278
F PVDV L + DY+ VI PMD TIK ++ + Y + ADVRL F NA
Sbjct: 116 AGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNA 175
Query: 279 MTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPM 338
M YN ++DVH+MA TL FE +W + LP + + + + ++
Sbjct: 176 MKYNDERHDVHVMAKTLLGKFEEKWLQL---LPKVAEEEKRREEEEAEAQLDMQLAQEAA 232
Query: 339 KKK---KVSPK--ETKIKAEPVR-------RVMTNEEKRILSTELEAL-LEELPESIIDF 385
K ++S + + + E VR R M+ EEKR L L L E+L +++
Sbjct: 233 HAKMAREISNELYDIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIV 292
Query: 386 LKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPG 433
+ + + + +E+++DIDA ++ TL+ L+ + D L + + A+ G
Sbjct: 293 AQNNPSFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKG 340
>gi|431916886|gb|ELK16646.1| Bromodomain-containing protein 2 [Pteropus alecto]
Length = 833
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 381 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 440
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 441 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 481
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 100 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 155
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 156 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 204
>gi|432847788|ref|XP_004066150.1| PREDICTED: uncharacterized protein LOC101159647 [Oryzias latipes]
Length = 1469
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C LL ++S + + W F PVD L + DY +IKHPMDL TIK K+ + QY
Sbjct: 434 LRFCARLLKEMLSKKHVAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKKKLDNRQYR 493
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE+R+
Sbjct: 494 DAQEFAADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEMRF 534
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD +KL +PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 49 VLKTLWKHHFAWPFQAPVDAVKLGLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 108
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 109 NTMFTNCYIYNKPGDDIVLMAEALEKLF 136
>gi|126297864|ref|XP_001365890.1| PREDICTED: bromodomain-containing protein 3 [Monodelphis domestica]
Length = 724
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|449269062|gb|EMC79871.1| Bromodomain-containing protein 3 [Columba livia]
Length = 724
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 310 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 369
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 370 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 410
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSA 94
Query: 265 LAFAADVRLTFSNA--MTYNPPQNDVHIMADTLRKYF 299
D F+N +++ P +D+ +MA L K F
Sbjct: 95 SECMQDFNTMFTNCLYLSFLQPTDDIVLMAQALEKIF 131
>gi|426250128|ref|XP_004018790.1| PREDICTED: bromodomain-containing protein 2 [Ovis aries]
Length = 803
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|114326383|ref|NP_001041552.1| bromodomain-containing protein 2 [Canis lupus familiaris]
gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=Bromodomain-containing protein 2
gi|55956582|emb|CAI11405.1| bromodomain-containing protein 2 [Canis lupus familiaris]
Length = 803
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|330414421|gb|AEC13624.1| bromodomain containing protein 2 [Ginglymostoma cirratum]
gi|339895692|dbj|BAK52515.1| bromodomain containing 2 [Ginglymostoma cirratum]
Length = 783
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ +Y
Sbjct: 357 LKYCNGILKELLSKKHAAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKRKMDEREYQ 416
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 417 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRF 457
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP + M + L+ L HQF W F PVD +KL++PDY +IK PMD+G
Sbjct: 79 PKKPGRVTNQVQYMQ----KVLMKALWKHQFAWPFYQPVDAVKLSLPDYHKIIKQPMDMG 134
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 135 TIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKLF 183
>gi|397474356|ref|XP_003808648.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Pan paniscus]
Length = 800
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|380815348|gb|AFE79548.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|380815350|gb|AFE79549.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420527|gb|AFH33477.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420529|gb|AFH33478.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948624|gb|AFI37917.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948626|gb|AFI37918.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
Length = 802
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|114606772|ref|XP_001168005.1| PREDICTED: bromodomain-containing protein 2 isoform 10 [Pan
troglodytes]
gi|114606774|ref|XP_001168036.1| PREDICTED: bromodomain-containing protein 2 isoform 11 [Pan
troglodytes]
gi|410213772|gb|JAA04105.1| bromodomain containing 2 [Pan troglodytes]
gi|410213774|gb|JAA04106.1| bromodomain containing 2 [Pan troglodytes]
gi|410267650|gb|JAA21791.1| bromodomain containing 2 [Pan troglodytes]
gi|410267652|gb|JAA21792.1| bromodomain containing 2 [Pan troglodytes]
gi|410303978|gb|JAA30589.1| bromodomain containing 2 [Pan troglodytes]
gi|410303980|gb|JAA30590.1| bromodomain containing 2 [Pan troglodytes]
gi|410354717|gb|JAA43962.1| bromodomain containing 2 [Pan troglodytes]
gi|410354719|gb|JAA43963.1| bromodomain containing 2 [Pan troglodytes]
Length = 800
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|297661247|ref|XP_002809174.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pongo
abelii]
gi|297661249|ref|XP_002809175.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Pongo
abelii]
Length = 801
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|4826806|ref|NP_005095.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|164419758|ref|NP_001106653.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|426352675|ref|XP_004043835.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426352677|ref|XP_004043836.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Gorilla
gorilla gorilla]
gi|12230989|sp|P25440.2|BRD2_HUMAN RecName: Full=Bromodomain-containing protein 2; AltName:
Full=O27.1.1; AltName: Full=Really interesting new gene
3 protein
gi|577293|dbj|BAA07641.1| KIAA9001 [Homo sapiens]
gi|2980663|emb|CAA43996.1| FSH [Homo sapiens]
gi|52545950|emb|CAH56171.1| hypothetical protein [Homo sapiens]
gi|119624068|gb|EAX03663.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624069|gb|EAX03664.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624071|gb|EAX03666.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|168277492|dbj|BAG10724.1| bromodomain-containing protein 2 [synthetic construct]
Length = 801
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|407042940|gb|EKE41627.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 315
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 115/214 (53%), Gaps = 7/214 (3%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+++C+ L +LM+ FNTPVD + L +P YF+VIK PMDLGTIK ++ +Y
Sbjct: 27 LRKCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKYITKE 86
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK-AIEKKLPVTVDMTAVPSRAD 324
F AD+ L F NA+ +N P ++V+ A L+K FE WK A ++K PV T V S +
Sbjct: 87 EFQADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKNAFKEKKPVDTK-TNVTSHNE 145
Query: 325 DMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIID 384
+ + E + KK + K +P +T EE L ++L+ +E+ + +I+
Sbjct: 146 TLNKVEEKKPEVSNSKKTRASSRKKNTNKP----LTKEEMIKLRSDLKQ-IEKNKDKLIE 200
Query: 385 FLKEHSAGETGEDELEIDIDALSDDTLFALRKLL 418
L + G++E+ +D+ + L L+++L
Sbjct: 201 VLAVVNVDSKGKNEVSLDLSKYTTQQLRELQRIL 234
>gi|109070687|ref|XP_001115845.1| PREDICTED: hypothetical protein LOC717893 isoform 7 [Macaca
mulatta]
gi|109070689|ref|XP_001115854.1| PREDICTED: hypothetical protein LOC717893 isoform 8 [Macaca
mulatta]
Length = 802
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|301757117|ref|XP_002914388.1| PREDICTED: bromodomain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 803
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|178057339|ref|NP_001116557.1| bromodomain-containing protein 2 [Sus scrofa]
gi|147223324|emb|CAN13285.1| bromodomain containing 2 [Sus scrofa]
Length = 803
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|114606788|ref|XP_001167666.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pan
troglodytes]
Length = 753
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|60360108|dbj|BAD90273.1| mKIAA4005 protein [Mus musculus]
Length = 818
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 369 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 428
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 429 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 469
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
+G + P + SV P++ LAP N P + N PKKP G ++ L
Sbjct: 60 EGFESPTMASV--PALQLAPA---------NPPPPEVSN-----PKKP-GRVTNQLQYLH 102
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K ++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y
Sbjct: 103 KV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASE 159
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 160 CMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 192
>gi|326490245|dbj|BAJ84786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 141/278 (50%), Gaps = 37/278 (13%)
Query: 182 KKGNSGRL---EPKKPAGAASSSNAM----LMKQCENLLTRLMSHQFGWVFNTPVDVMKL 234
K G++GR + A A SN LM+Q ++ ++ SH++ F PVDV+ L
Sbjct: 56 KHGSAGRRAIGSSRYAANGARDSNCKGMPDLMRQLAGIIRQITSHEWSAPFLQPVDVVGL 115
Query: 235 NIPDYFTVIKHPMDLGTIKCKI---TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIM 291
+ DY+ +I PMD TI+ K+ +Y +DVRL F+NAMTYN +DVHIM
Sbjct: 116 QLDDYYKIITKPMDFSTIQNKMEGKDGTKYKSVREIYSDVRLIFTNAMTYNDELHDVHIM 175
Query: 292 ADTLRKYFEVRWKAI-------EKKLPV-TVDMTAVPSRADDMI-----ETETRMGMPPM 338
A L + FE +W + E+K + T D + +D I +T+ +
Sbjct: 176 AKLLLEKFEEKWLQLLPKVENEERKQQMETNDAPTTDTSPEDAIAQLAKDTDDELN---- 231
Query: 339 KKKKVSPKETKIKAEPVRRV--MTNEEKRILSTELEALL-EELPESIIDFLKEHSAGETG 395
+++ + +++ V+R MT +EKR L L L E+ +++ +++ +T
Sbjct: 232 ---EINKQLEELRNMVVQRCKKMTTDEKRKLGAGLCHLTPEDFSKALELVAQDNPDFQTT 288
Query: 396 EDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPG 433
+EL++D+DA S+ TL+ L+ ++ E ++QANP
Sbjct: 289 AEELDLDMDAQSETTLWRLKF----FVREALERQANPA 322
>gi|297661251|ref|XP_002809176.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Pongo
abelii]
Length = 754
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|440909604|gb|ELR59493.1| Bromodomain-containing protein 2 [Bos grunniens mutus]
Length = 810
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|71067345|ref|NP_034368.2| bromodomain-containing protein 2 [Mus musculus]
gi|326368244|ref|NP_001191902.1| bromodomain-containing protein 2 [Mus musculus]
gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Female sterile homeotic-related protein 1; AltName:
Full=Fsrg-1; AltName: Full=Protein RING3
gi|2995270|emb|CAA15819.1| MMRING3.1.2 [Mus musculus]
gi|3041763|dbj|BAA25416.1| Ring3 [Mus musculus]
gi|3811391|gb|AAC69907.1| RING3 [Mus musculus]
gi|74186521|dbj|BAE34749.1| unnamed protein product [Mus musculus]
gi|74214328|dbj|BAE40404.1| unnamed protein product [Mus musculus]
gi|123233747|emb|CAM17898.1| bromodomain containing 2 [Mus musculus]
gi|148678305|gb|EDL10252.1| bromodomain containing 2 [Mus musculus]
gi|187954015|gb|AAI38657.1| Bromodomain containing 2 [Mus musculus]
gi|223459952|gb|AAI38656.1| Bromodomain containing 2 [Mus musculus]
Length = 798
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
+G + P + SV P++ LAP N P + N PKKP G ++ L
Sbjct: 40 EGFESPTMASV--PALQLAPA---------NPPPPEVSN-----PKKP-GRVTNQLQYLH 82
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K ++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y
Sbjct: 83 KV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASE 139
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 140 CMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|297290567|ref|XP_001115810.2| PREDICTED: hypothetical protein LOC717893 isoform 2 [Macaca
mulatta]
Length = 755
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|166851651|gb|ABY91321.1| RING3 [Sus scrofa]
Length = 756
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|52545923|emb|CAH56179.1| hypothetical protein [Homo sapiens]
Length = 754
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|313747419|ref|NP_001186385.1| bromodomain-containing protein 2 isoform 3 [Homo sapiens]
gi|426352681|ref|XP_004043838.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Gorilla
gorilla gorilla]
gi|182769|gb|AAA68890.1| putative [Homo sapiens]
Length = 754
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|395822025|ref|XP_003784325.1| PREDICTED: bromodomain testis-specific protein [Otolemur garnettii]
Length = 928
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++KHPMDLGTIK K+ + +Y
Sbjct: 276 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKHPMDLGTIKGKMDNQEYK 335
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 336 DAYEFAADVRLMFMNCYKYNPPDHEVVTMAKMLQDVFEMHFAKI 379
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD +KL +PDY+T+IK+PMDL TIK ++ + Y D+
Sbjct: 38 VLKALWKHSFSWPFQHPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDL 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN P +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKPGDDIVLMAQALEKLF 125
>gi|417404705|gb|JAA49093.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 799
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|118099425|ref|XP_425330.2| PREDICTED: bromodomain-containing protein 3 [Gallus gallus]
Length = 722
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|351702676|gb|EHB05595.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 722
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 271 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 330
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 331 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 371
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 210 ENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 2 QNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECM 61
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 62 QDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 92
>gi|345306075|ref|XP_001505872.2| PREDICTED: bromodomain-containing protein 3 [Ornithorhynchus
anatinus]
Length = 724
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|47059183|ref|NP_997660.1| bromodomain-containing protein 2 [Rattus norvegicus]
gi|392355205|ref|XP_003751971.1| PREDICTED: bromodomain-containing protein 2-like [Rattus
norvegicus]
gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Protein RING3
gi|46237556|emb|CAE83937.1| bromodomain-containing 2 [Rattus norvegicus]
gi|149043366|gb|EDL96817.1| bromodomain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 798
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
+G + P + SV P++ LAP N P + N PKKP G ++ L
Sbjct: 40 EGFESPTMASV--PALQLAPA---------NPPPPEVSN-----PKKP-GRVTNQLQYLH 82
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K ++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y
Sbjct: 83 KV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASE 139
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 140 CMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|2995269|emb|CAA15818.1| MMRING3.1.1 [Mus musculus]
gi|62945214|dbj|BAD97682.1| bromodomain-containing Brd2 protein [Mus musculus]
Length = 752
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|402866610|ref|XP_003897472.1| PREDICTED: bromodomain-containing protein 2 [Papio anubis]
Length = 804
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|15706263|emb|CAC69989.1| bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|1370115|emb|CAA65450.1| kinase [Homo sapiens]
Length = 754
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|126309678|ref|XP_001369391.1| PREDICTED: bromodomain-containing protein 2-like [Monodelphis
domestica]
Length = 801
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 351 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 410
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 411 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 451
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWLASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|291396003|ref|XP_002714557.1| PREDICTED: bromodomain containing 2 [Oryctolagus cuniculus]
Length = 802
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|357118940|ref|XP_003561205.1| PREDICTED: transcription factor GTE1-like [Brachypodium distachyon]
Length = 343
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 26/284 (9%)
Query: 162 VVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQF 221
VV GKK GR K G SGR G+ + LM+Q ++ + +H +
Sbjct: 40 VVRFYDGKKHGSGGR-----KAGGSGRYAAN--GGSHCKGMSELMRQFGGIIRTVTNHDW 92
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS---GQYSDPLAFAADVRLTFSNA 278
F PVDV+ L + DY+ +I PMD TI+ K+ +Y++ +DVRL F+NA
Sbjct: 93 AEPFLKPVDVVGLQLDDYYKIITKPMDFSTIRNKMEGKDGTKYNNVREIYSDVRLIFANA 152
Query: 279 MTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPP 337
M YN +DVHIMA L + FE +W + LP V + + +D+ T T
Sbjct: 153 MKYNDEHHDVHIMAKLLLERFEEKWLHL---LPKVENEERKIKEEPNDVPSTNTSPEAAI 209
Query: 338 MKKKKVSP---KETKIKAEPVR-------RVMTNEEKRILSTELEALL-EELPESIIDFL 386
K K + E + E +R R MT +EKR L L L ++L +++
Sbjct: 210 AKLAKDTDDELNEINKQLEDLRKMVVQRCRKMTTDEKRKLGAGLCHLTPDDLSKALEMVA 269
Query: 387 KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQA 430
+++ + + +E+++D+DA ++ TL+ L+ + + LE+Q K A
Sbjct: 270 QDNPSFQISGEEVDLDMDAQTETTLWRLKFFVRE-ALERQAKAA 312
>gi|326930474|ref|XP_003211372.1| PREDICTED: bromodomain-containing protein 3-like [Meleagris
gallopavo]
Length = 720
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|395533918|ref|XP_003768996.1| PREDICTED: bromodomain-containing protein 2-like [Sarcophilus
harrisii]
Length = 800
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 351 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 410
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 411 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 451
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWLASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|3273701|gb|AAC24810.1| female sterile homeotic-related protein Frg-1 [Mus musculus]
Length = 798
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 68 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 124 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|301770655|ref|XP_002920742.1| PREDICTED: bromodomain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 728
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y+
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDGREYA 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 194 PAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
PA +N + Q N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTI
Sbjct: 29 PAKPGRKTNQLQYMQ--NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTI 86
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K ++ + Y D F+N YN P +D+ +MA L K F
Sbjct: 87 KKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|395506368|ref|XP_003757505.1| PREDICTED: bromodomain-containing protein 3 [Sarcophilus harrisii]
Length = 724
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|313747417|ref|NP_001186384.1| bromodomain-containing protein 2 isoform 2 [Homo sapiens]
gi|39645317|gb|AAH63840.1| BRD2 protein [Homo sapiens]
Length = 836
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK------LPVTVDM 316
D FAADVRL FSN YNPP +DV MA L+ FE R+ + + LPV+ M
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTAM 469
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|348574826|ref|XP_003473191.1| PREDICTED: bromodomain-containing protein 3-like [Cavia porcellus]
Length = 725
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWRHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENTYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|432855679|ref|XP_004068304.1| PREDICTED: bromodomain testis-specific protein-like [Oryzias
latipes]
Length = 969
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C N+L ++S + + W F TPVD + L + DY +IK PMDL TIK K+ +Y+
Sbjct: 259 LRDCNNILKEMLSKRHCAYAWPFYTPVDAIALGLQDYHDIIKQPMDLSTIKKKMDHQEYT 318
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ FAADVRL FSN YNPP + V MA L++ FE R+
Sbjct: 319 NATEFAADVRLMFSNCYRYNPPSHGVVYMARKLQEVFEARY 359
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L HQ+ W F PVD + L IPDY+ +IKHPMDLGT+ ++ + Y + D+
Sbjct: 40 VIKALWRHQYSWPFRQPVDAVALCIPDYYKLIKHPMDLGTVMQRLKNRYYWEANECIKDI 99
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ MA TL K F
Sbjct: 100 STMFNNCYVYNRPGDDIVFMAQTLEKIF 127
>gi|198282051|ref|NP_001128282.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
gi|197245764|gb|AAI68574.1| brd2 protein [Xenopus (Silurana) tropicalis]
Length = 758
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVDV L + DY+ +IKHPMDL TIK K+ + ++
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNREFK 383
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAA VRL FSN YNPP +DV MA L+ FE R+
Sbjct: 384 DAQEFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 424
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y L D
Sbjct: 66 VMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQDF 125
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSLEKMF 153
>gi|432094627|gb|ELK26133.1| Bromodomain-containing protein 2 [Myotis davidii]
Length = 881
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 434 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 493
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 494 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 534
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 153 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 208
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 209 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 257
>gi|148676419|gb|EDL08366.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
gi|148676420|gb|EDL08367.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
Length = 731
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 316 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 375
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 376 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 416
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 43 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 102
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 103 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 137
>gi|167395679|ref|XP_001741703.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165893699|gb|EDR21839.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 481
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 13/215 (6%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C+ +L +L F TPVD + N+PDY+ VI+HPMDL TI K G Y FA
Sbjct: 271 CKQILNQLKLLPEANPFLTPVDPIAQNLPDYYVVIRHPMDLSTITKKFRYGIYEHIDDFA 330
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI---EKKLPVTVDMTAVPSRADD 325
DVRL F NAM YNPP+N +HI A TL +YF+ + K I + + V + D
Sbjct: 331 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQIKEIYDCRRTIKVIFNQDEHNYWNDQ 390
Query: 326 MIETETRMGMPPMKKKK--VSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESII 383
+ + +K+++ PK + + P ++ EEK LS LE + E ++
Sbjct: 391 REWMNFKQSIEELKEEQGTFPPKMEEERIMP----LSFEEKIELSKRLEEVEGTKQEEVL 446
Query: 384 DFLKEHSAGETGEDELEIDIDALSDDTLFALRKLL 418
+LK + E E+EI + L++ L K++
Sbjct: 447 KYLK----IDKDEGEVEIKFETLNEQDFIMLNKIV 477
>gi|348670161|gb|EGZ09983.1| hypothetical protein PHYSODRAFT_460736 [Phytophthora sojae]
Length = 924
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 57/88 (64%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LLT+LM ++GW FN PVD ++ NIPDYF +IK PMDLGTIK ++ + Y+ AFA DV
Sbjct: 120 LLTKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHYNSVEAFAGDV 179
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
RL F N + YN N +I A L F
Sbjct: 180 RLVFENCIAYNSSTNKFNIAAKQLLASF 207
>gi|297742702|emb|CBI35336.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 27/288 (9%)
Query: 170 KRAPNGRNGPQTKKGNSGRLEPKKPA--------GAASSSNAMLMKQCENLLTRLMSHQF 221
KR NG G K + K AA LM+Q +L ++M H++
Sbjct: 100 KRQLNGYKGSSVLKDKERHVASAKKQQQDASRREAAAVKRMQELMRQFGTILRQIMQHKW 159
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---YSDPLAFAADVRLTFSNA 278
F PVDV L + DY+ VI PMD TIK ++ + Y + ADVRL F NA
Sbjct: 160 AGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNA 219
Query: 279 MTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPM 338
M YN ++DVH+MA TL FE +W + LP + + + + ++
Sbjct: 220 MKYNDERHDVHVMAKTLLGKFEEKWLQL---LPKVAEEEKRREEEEAEAQLDMQLAQEAA 276
Query: 339 KKK---KVSPK--ETKIKAEPVR-------RVMTNEEKRILSTELEAL-LEELPESIIDF 385
K ++S + + + E VR R M+ EEKR L L L E+L +++
Sbjct: 277 HAKMAREISNELYDIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIV 336
Query: 386 LKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQANPG 433
+ + + + +E+++DIDA ++ TL+ L+ + D L + + A+ G
Sbjct: 337 AQNNPSFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKG 384
>gi|427798983|gb|JAA64943.1| Putative bromodomain-containing protein 2, partial [Rhipicephalus
pulchellus]
Length = 852
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C ++L L + + + W F PVD L + DY +IKHPMDLGT+K K+ + +Y
Sbjct: 382 MKYCNSILKELFAKKHAGYAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYK 441
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
P FA DVRL F+N YNPP ++V MA L+ FE+R+
Sbjct: 442 SPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRY 482
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 56/106 (52%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
PA + L + ++ + HQF W F PVD +KLN+PDY +I+HPMDLGTIK
Sbjct: 52 PASRRQRTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIK 111
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
++ YS D + F+N YN P DV +MA L K F
Sbjct: 112 KRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLF 157
>gi|325187425|emb|CCA21963.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 950
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++K+C +++ RLM++ F TPVD + L IPDYF VIK PMDLGTI+ + SG YSD
Sbjct: 402 MLKKCHSIIKRLMANSKAGPFLTPVDPVALGIPDYFKVIKEPMDLGTIRQNLESGFYSDA 461
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF--EVRWKAIEKKLPVT 313
VRL FSNAM YN + VHI A L F +R I+ P++
Sbjct: 462 SILIEHVRLVFSNAMLYNAAHSQVHIFAQKLMDDFGKRIRNANIKYNSPIS 512
>gi|281349316|gb|EFB24900.1| hypothetical protein PANDA_009517 [Ailuropoda melanoleuca]
Length = 696
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y+
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDGREYA 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 194 PAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
PA +N + Q N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTI
Sbjct: 29 PAKPGRKTNQLQYMQ--NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTI 86
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K ++ + Y D F+N YN P +D+ +MA L K F
Sbjct: 87 KKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|21594631|gb|AAH31536.1| Bromodomain containing 3 [Mus musculus]
Length = 726
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>gi|165972331|ref|NP_001107045.1| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|165972333|ref|NP_075825.3| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|47115837|sp|Q8K2F0.2|BRD3_MOUSE RecName: Full=Bromodomain-containing protein 3; AltName:
Full=Bromodomain-containing FSH-like protein FSRG2
gi|74141421|dbj|BAE35988.1| unnamed protein product [Mus musculus]
gi|74195657|dbj|BAE39636.1| unnamed protein product [Mus musculus]
gi|74204674|dbj|BAE35406.1| unnamed protein product [Mus musculus]
gi|148676422|gb|EDL08369.1| bromodomain containing 3, isoform CRA_d [Mus musculus]
Length = 726
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>gi|384493798|gb|EIE84289.1| hypothetical protein RO3G_08999 [Rhizopus delemar RA 99-880]
Length = 569
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 164 LAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQF-- 221
+ PK K P ++ P+T + R P+K N MK C L L ++
Sbjct: 203 VRPKRKIHPPPSKDYPETM---TKRRNPRK--------NDAQMKFCAQALKELKKTKYRD 251
Query: 222 -GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+ F PVDV+ LNIPDY ++KHPMDL TI+ K+ G+Y++P F D+RL F+N
Sbjct: 252 INYPFLHPVDVVGLNIPDYVDIVKHPMDLSTIEKKLNDGEYAEPEDFENDIRLMFNNCYL 311
Query: 281 YNPPQNDVHIMADTLRKYFEVRW 303
YNPP VH M L K F+ +W
Sbjct: 312 YNPPSLPVHKMGRQLEKAFDDKW 334
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+K C ++ L H+ F PVD +KLNIPDY +I+HPMDL T+ K+ SGQY
Sbjct: 58 IKYCGAIMRNLKKHRDAAPFLQPVDYVKLNIPDYPKIIRHPMDLATVDKKLNSGQYDSVD 117
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRA 323
+ DVRL F+N +N P+ V ++ + FE K++ +++P + V SR+
Sbjct: 118 QWIYDVRLVFNNCFKFNGPEAMVSMLCQNVESAFE---KSL-RQMPPNKNTVGVGSRS 171
>gi|354501563|ref|XP_003512860.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Cricetulus
griseus]
gi|344252302|gb|EGW08406.1| Bromodomain-containing protein 3 [Cricetulus griseus]
Length = 727
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|350597125|ref|XP_003484360.1| PREDICTED: bromodomain-containing protein 3 [Sus scrofa]
Length = 726
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|226342873|ref|NP_065254.3| bromodomain-containing protein 4 isoform 1 [Mus musculus]
gi|148708379|gb|EDL40326.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
gi|148708382|gb|EDL40329.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
Length = 1400
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|213512228|ref|NP_001094373.1| bromodomain containing 4 [Rattus norvegicus]
Length = 1403
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|50400639|sp|Q9ESU6.1|BRD4_MOUSE RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Mitotic chromosome-associated protein; Short=MCAP
gi|9931486|gb|AAG02191.1|AF273217_1 cell proliferation related protein CAP [Mus musculus]
Length = 1400
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|18308125|gb|AAL67833.1|AF461395_1 bromodomain-containing protein BRD4 long variant [Mus musculus]
Length = 1400
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|74184776|dbj|BAE27987.1| unnamed protein product [Mus musculus]
Length = 1401
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 342 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 401
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 402 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 461
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 462 EPEEPVVTVSSPAVP 476
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|344309215|ref|XP_003423272.1| PREDICTED: bromodomain-containing protein 3 [Loxodonta africana]
Length = 727
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 311 LRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D +FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 371 DAQSFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>gi|165972335|ref|NP_001107046.1| bromodomain-containing protein 3 isoform 1 [Mus musculus]
gi|62485072|dbj|BAD91008.2| Orfx [Mus musculus]
gi|148676418|gb|EDL08365.1| bromodomain containing 3, isoform CRA_a [Mus musculus]
Length = 743
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>gi|395844316|ref|XP_003794908.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Otolemur
garnettii]
Length = 726
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|348538983|ref|XP_003456969.1| PREDICTED: hypothetical protein LOC100693386 [Oreochromis
niloticus]
Length = 1432
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C L+ ++S + + W F PVD L + DY +IKHPMDL TIK K+ + QY
Sbjct: 435 LRWCARLVREMLSKKHVAYAWPFYKPVDAKALGLHDYHEIIKHPMDLSTIKKKLDNRQYR 494
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE+R+
Sbjct: 495 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEMRF 535
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 89 VLKTLWKHNFAWPFQAPVDAIKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQDF 148
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 149 NTMFTNCYIYNKPGDDIVLMAEALEKLF 176
>gi|354501565|ref|XP_003512861.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Cricetulus
griseus]
Length = 744
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|8575733|gb|AAF78072.1| bromodomain-containing FSH-like protein FSRG2 [Mus musculus]
gi|46241516|gb|AAS82951.1| endothelial differentiation inhibitory protein D18 [Mus musculus]
Length = 726
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>gi|395530391|ref|XP_003767279.1| PREDICTED: bromodomain testis-specific protein [Sarcophilus
harrisii]
Length = 840
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + + + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 213 LKYCNEILKEMFAKKHVAYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMDNQEYK 272
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA TL+ FE+++ I
Sbjct: 273 DAHEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFEMQFAKI 316
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DY+++IK PMDL TIK ++ Y D++ F+N YN P +D+ +MA L K
Sbjct: 3 DYYSIIKKPMDLSTIKKRLEHKYYVKSSECIEDLKTMFANCYLYNKPGDDIVLMAQALEK 62
Query: 298 YF 299
F
Sbjct: 63 LF 64
>gi|119624070|gb|EAX03665.1| bromodomain containing 2, isoform CRA_c [Homo sapiens]
Length = 552
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 12/238 (5%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
G+ +S +K C +L L+S + + W F PVD L + DY +IKHPMDL T+
Sbjct: 234 GSPASPPGKQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTV 293
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
K K+ + Y D FAADVRL FSN YNPP +DV MA L + +A+ ++L
Sbjct: 294 KRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL------QLRAVHEQL-A 346
Query: 313 TVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELE 372
+ + + E + K P + E R M+ +EKR LS ++
Sbjct: 347 ALSQGPISKPKRKREKKEKKKKRKAEKPPPALPTGYDSEEEEESRPMSYDEKRQLSLDIN 406
Query: 373 ALLEELPESIIDFL--KEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQK 428
L E ++ + +E S ++ +E+EID + L TL L + + L +K +K
Sbjct: 407 KLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRK 464
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|397567839|gb|EJK45812.1| hypothetical protein THAOC_35556, partial [Thalassiosira oceanica]
Length = 1238
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 61/97 (62%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L +C +L L +H+ GWVF TPV+ ++L I DYF +IK PMDLGTI K+ Y
Sbjct: 736 LRSRCSEILKSLQNHEHGWVFATPVNPVELGIDDYFDIIKKPMDLGTIGEKLDQELYHSF 795
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
F ADV+LTF NAM YN Q VH MA L+K F++
Sbjct: 796 EDFRADVQLTFENAMKYNEEQTVVHDMAKALKKKFDL 832
>gi|157819431|ref|NP_001102045.1| bromodomain-containing protein 3 [Rattus norvegicus]
gi|149039215|gb|EDL93435.1| bromodomain containing 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 725
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|149039214|gb|EDL93434.1| bromodomain containing 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197246453|gb|AAI68949.1| Brd3 protein [Rattus norvegicus]
Length = 742
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|324500947|gb|ADY40429.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 976
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ +++ L S + F W F PVDV L + DY+ ++K PMDLGTI+ K+ + QY+
Sbjct: 173 MKYCQRIISELFSKKCKSFTWPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQYA 232
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
P D+ L N YNPP + VH TL+KYFE +W+ +
Sbjct: 233 SPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKWRQM 276
>gi|303287933|ref|XP_003063255.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455087|gb|EEH52391.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 120
Score = 100 bits (248), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/115 (43%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
++P A A+++ ++ CE +L L H++ +VF PVD + L IPDY VIK PMD
Sbjct: 1 MDPASEA-EATATRTHVLAACEKVLNALKRHKYYFVFEHPVDPVALGIPDYPDVIKDPMD 59
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
LGT+ K+ G Y P F D RLTF N TYN P D H M D + K FE W
Sbjct: 60 LGTVGDKLARGGYLHPREFEYDCRLTFQNCKTYNSPGTDAHSMGDAMLKEFEKNW 114
>gi|67972378|dbj|BAE02531.1| unnamed protein product [Macaca fascicularis]
Length = 776
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|354485151|ref|XP_003504747.1| PREDICTED: bromodomain-containing protein 4 [Cricetulus griseus]
Length = 721
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA +S + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPAPEKNSKISEQLKCCSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L++ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|395844318|ref|XP_003794909.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Otolemur
garnettii]
Length = 743
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|348552081|ref|XP_003461857.1| PREDICTED: bromodomain-containing protein 4-like [Cavia porcellus]
Length = 1373
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 400 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 454
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|149034726|gb|EDL89463.1| bromodomain containing 4, isoform CRA_b [Rattus norvegicus]
Length = 723
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|344239383|gb|EGV95486.1| Bromodomain-containing protein 4 [Cricetulus griseus]
Length = 723
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA +S + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPAPEKNSKISEQLKCCSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L++ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|403308909|ref|XP_003944882.1| PREDICTED: bromodomain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 1334
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 364 QHPASEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 423
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 424 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 483
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 484 EPEEPVVAVSSPAVP 498
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 58 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 117
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 118 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 177
Query: 296 RKYF 299
K F
Sbjct: 178 EKLF 181
>gi|194696466|gb|ACF82317.1| unknown [Zea mays]
gi|413942791|gb|AFW75440.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 133/256 (51%), Gaps = 21/256 (8%)
Query: 199 SSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
+SS M LM+Q LL + SH+ W F PVDV+ L +PDY +I PMD TI+ K+
Sbjct: 71 ASSRGMPDLMRQFGVLLKEITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKM 130
Query: 257 TSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVT 313
Y++ +DVRL F+NAM YN QN +H+MA +L + FE +W K+ +
Sbjct: 131 ERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVE-S 189
Query: 314 VDMTAVPSRADDMIETETRMGMPPMKKKK--------VSPKETKIKAEPVRRV--MTNEE 363
+ + + T T + +K K ++ K +++ V R MT +E
Sbjct: 190 EEKRQKEEESKGVAATNTSREVAIVKLAKDTDDELNQINKKLEELRKMVVHRCRKMTTDE 249
Query: 364 KRILSTELEALL-EELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYL 422
KR L + L ++L +++ +++ + +T +E+++D+DA S+ TL+ L+ ++
Sbjct: 250 KRKLGAGICHLSPDDLSKALEIVAQDNPSFQTKAEEVDLDMDAQSETTLWRLKF----FV 305
Query: 423 LEKQQKQANPGPCEME 438
E ++QAN +M+
Sbjct: 306 REALERQANVASGKMD 321
>gi|226246640|ref|NP_932762.2| bromodomain-containing protein 4 isoform 2 [Mus musculus]
gi|148708380|gb|EDL40327.1| bromodomain containing 4, isoform CRA_b [Mus musculus]
gi|187951219|gb|AAI38836.1| Bromodomain containing 4 [Mus musculus]
gi|187952057|gb|AAI38835.1| Bromodomain containing 4 [Mus musculus]
Length = 723
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|148708381|gb|EDL40328.1| bromodomain containing 4, isoform CRA_c [Mus musculus]
Length = 734
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 352 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 411
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 412 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 471
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 472 EPEEPVVTVSSPAVP 486
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 81 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 140
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 141 NTMFTNCYIYNKPGDDIVLMAEALEKLF 168
>gi|18308127|gb|AAL67834.1|AF461396_1 bromodomain-containing protein BRD4 short variant [Mus musculus]
Length = 723
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|47208417|emb|CAF92198.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1579
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 209 CENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
C +L+ ++S + + W F PVD L + DY +IKHPMDL TIK K+ + QY +P
Sbjct: 443 CASLVREMLSKKHAAYAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKVKLENRQYREPQ 502
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 503 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 540
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 32/120 (26%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIP--------------------------------DY 239
+L L HQF W F+ PVD +KLN+P DY
Sbjct: 51 VLKTLWKHQFAWPFHAPVDAVKLNLPVSVAPRDCSHLDIQYKYYTQFCEVNCQMQSLQDY 110
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+T+IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L K F
Sbjct: 111 YTIIKTPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVF 170
>gi|84579095|dbj|BAE72981.1| hypothetical protein [Macaca fascicularis]
Length = 617
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 75/133 (56%), Gaps = 6/133 (4%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD+
Sbjct: 238 PAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMS 297
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI--EK 308
TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ + E
Sbjct: 298 TIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEP 357
Query: 309 KLPVT-VDMTAVP 320
+ PV V AVP
Sbjct: 358 EEPVVAVSSPAVP 370
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L K F
Sbjct: 1 MDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 53
>gi|297466946|ref|XP_002704782.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
Length = 1368
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPDKSSKVSEQLKCCNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF----A 455
Query: 309 KLPVTVDMTAVPSRADDMIETETRMGMPP 337
K+P + AV + + ++ T++ PP
Sbjct: 456 KMPDEPEEPAV-AVSSPVVPPPTKVAAPP 483
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|297476378|ref|XP_002688607.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
gi|296486110|tpg|DAA28223.1| TPA: bromodomain containing 4 [Bos taurus]
Length = 1368
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPDKSSKVSEQLKCCNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF----A 455
Query: 309 KLPVTVDMTAVPSRADDMIETETRMGMPP 337
K+P + AV + + ++ T++ PP
Sbjct: 456 KMPDEPEEPAV-AVSSPVVPPPTKVAAPP 483
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|149034725|gb|EDL89462.1| bromodomain containing 4, isoform CRA_a [Rattus norvegicus]
Length = 915
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|356565711|ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797746 [Glycine max]
Length = 738
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 13/240 (5%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
AAS LM+Q +L ++ H++ W F PVD+ L + DY+ VI PMD TIK +
Sbjct: 460 AAASKRMQDLMRQFGTILRQITQHKWAWPFMQPVDIEGLGLHDYYEVIDKPMDFSTIKNQ 519
Query: 256 ITSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
+ + Y ADVRL F NAM YN ++DVH+MA TL FE +W + K+
Sbjct: 520 MEAKDGTGYKHVREICADVRLVFKNAMKYNDERSDVHVMAKTLLSKFEEKWLQLLPKVTE 579
Query: 313 TVDMTAVPSRADDMIETETRMGMPPMKKKKVSPK--ETKIKAEPVR-------RVMTNEE 363
+ + + +S + E + E +R R M+ EE
Sbjct: 580 EETRREEEEAEAQLALQVAQEAAQAKMARDLSNELYEVDVILEELREMVVKRFRKMSTEE 639
Query: 364 KRILSTELEALL-EELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYL 422
KR L L L E+L +++ + + + + +E+++D+DA S+ TL+ L+ + + L
Sbjct: 640 KRKLGDALTRLSPEDLSKALEIVAQNNPSFQATAEEVDLDMDAQSESTLWRLKFFVKEAL 699
>gi|344283171|ref|XP_003413346.1| PREDICTED: bromodomain-containing protein 4-like [Loxodonta
africana]
Length = 965
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 160 PSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKK--------PAGAASSSNAMLMKQCEN 211
PS+ PK K P +G K PKK PA SS + +K C
Sbjct: 307 PSLPPEPKATKLGPRRESGRPVKP-------PKKDVPDSQQHPAPDKSSKVSEQLKCCSG 359
Query: 212 LLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+L + + + + W F PVDV L + DY +IKHPMD+ TIK K+ + +Y D F
Sbjct: 360 ILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFG 419
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI--EKKLPVT-VDMTAVP 320
ADVRL FSN YNPP ++V MA L+ FE+R+ + E + PV V AVP
Sbjct: 420 ADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVP 474
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWRHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|27804346|gb|AAO22237.1| BRD4-NUT fusion oncoprotein [Homo sapiens]
Length = 1846
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|298706226|emb|CBJ29267.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1079
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 204 MLMKQCENLLTRLMSHQFG---WVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L+++ +LT+LMS G +FN PVD +KL IPDYF + HPMDLGTIK ++ S
Sbjct: 596 YLVQKVRPILTKLMSSGTGPQRGLFNVPVDPLKLGIPDYFKRVPHPMDLGTIKSRLLSMS 655
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
Y+ P FA+DVRL F NA+ +NP + VH A L F+
Sbjct: 656 YTTPEEFASDVRLVFKNAIGFNPETHFVHTWAVQLLNEFD 695
>gi|241604623|ref|XP_002405922.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
gi|215502589|gb|EEC12083.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
Length = 885
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C ++L L + + + W F PVD L + DY +IKHPMDLGT+K K+ + +Y
Sbjct: 397 MKYCNSILKELFAKKHAGYAWPFYKPVDADLLGLHDYHEIIKHPMDLGTVKQKMDNREYK 456
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
P FA DVRL F+N YNPP ++V MA L+ FE+R+
Sbjct: 457 SPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRY 497
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
PA + L ++ + HQF W F PVD ++LN+PDY +I HPMDLGTIK
Sbjct: 28 PASKKHRNTNQLQYLLRVVMKAIWKHQFAWPFQQPVDTVRLNLPDYHRIIDHPMDLGTIK 87
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
++ + Y+ D F+N YN P DV +MA L K F
Sbjct: 88 KRLENYYYASASECIQDFNTMFTNCYVYNKPGEDVVLMAQALEKLF 133
>gi|195655085|gb|ACG47010.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 21/256 (8%)
Query: 199 SSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
+SS M LM+Q LL + SH+ W F PVDV+ L +PDY +I PMD TI+ K+
Sbjct: 71 ASSRGMPDLMRQFGVLLKEITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKM 130
Query: 257 TSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVT 313
Y++ +DVRL F+NAM YN QN +H+MA +L + FE +W K+ +
Sbjct: 131 ERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVE-S 189
Query: 314 VDMTAVPSRADDMIETETRMGMPPMKKKKVSPKE---TKIKAEPVR-------RVMTNEE 363
+ + + T T + +K K + E K E +R R MT +E
Sbjct: 190 EEKRQKEEESKGVAATNTSREVAIVKLAKDTDDELNQINRKLEELRKMVVHRCRKMTTDE 249
Query: 364 KRILSTELEALL-EELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYL 422
KR L + L ++L +++ +++ + +T +E+++D+DA S+ TL+ L+ ++
Sbjct: 250 KRKLGAVICHLSPDDLSKALEIVAQDNPSFQTKAEEVDLDMDAQSETTLWRLKF----FV 305
Query: 423 LEKQQKQANPGPCEME 438
E ++QAN +M+
Sbjct: 306 REALERQANVASGKMD 321
>gi|28278510|gb|AAH45866.1| Brd2a protein [Danio rerio]
Length = 586
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + W F PVDV L + DY+ +I +PMDL TIK K+ +Y
Sbjct: 386 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 445
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D L FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 446 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRF 486
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 134 VVLSPSSD--IRSCNDGQKRPLLE-SVGGPSVVLAPKGKK-RAPN----GRNGPQTKK-G 184
LSP D + C+ Q ++E ++ GP GK+ R P+ G GP
Sbjct: 3 TALSPPFDSSLGGCDGMQGLTMMEQTISGP-------GKRIRKPSLLYEGFEGPALPHIA 55
Query: 185 NSGRLEP--KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTV 242
SG +P + P+ +N + Q + L+ L H F W F+ PVD KLN+PDY+ +
Sbjct: 56 QSGPPQPAVRDPSRQGRMTNQLQFLQ-KALVRMLWRHHFAWPFHEPVDAAKLNLPDYYNI 114
Query: 243 IKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
IK PMD+GTIK ++ + Y D+ F+N YN P +D+ +MA +L K F
Sbjct: 115 IKQPMDMGTIKKRLENNYYRSASECMQDLNTMFTNCYIYNKPTDDIVLMAQSLEKAF 171
>gi|449452116|ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
gi|449485919|ref|XP_004157310.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
Length = 378
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 19/245 (7%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---Y 261
LM+Q +L ++ H++ W F PVDV L + DY+ VI PMD TIK ++ + Y
Sbjct: 97 LMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 156
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPS 321
+ +DVRL F NAM YN ++DVH+MA TL FE +W + LP +
Sbjct: 157 KNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---LPKVTEEEKRRE 213
Query: 322 RADDMIETETRMGMPPMKKKKVSP-----KETKIKAEPVR-------RVMTNEEKRILST 369
+ + ++ + K E ++ E +R R ++ EEKR L
Sbjct: 214 DEEAEALLDMQLAQEAAQAKMARDISNEIYEVDMQLEELRELVVQNCRKISTEEKRKLGA 273
Query: 370 ELEALLEELPESIIDFLKEHS-AGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQK 428
L L E ++ + E++ + + +E+++DIDA S+ TL+ L+ + D L +
Sbjct: 274 ALTKLSPEDISKALEIVAENNPSFQATAEEVDLDIDAQSESTLWRLKFFVKDALEVHAKS 333
Query: 429 QANPG 433
A+ G
Sbjct: 334 SASTG 338
>gi|410902639|ref|XP_003964801.1| PREDICTED: uncharacterized protein LOC101061335 [Takifugu rubripes]
Length = 1416
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 209 CENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
C +L+ ++S + + W F PVD L + DY +IKHPMDL TIK K+ + QY +P
Sbjct: 374 CASLVREMVSKKHAAYAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKAKLENRQYREPQ 433
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 434 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 471
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+T+IK PMD+GTIK ++ + Y + D
Sbjct: 57 VLKTLWKHQFAWPFQAPVDAVKLNLPDYYTIIKTPMDMGTIKKRLENSYYWNAQECIQDF 116
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 117 NTMFTNCYIYNKPGDDIVLMAEALEKVF 144
>gi|71897271|ref|NP_001025845.1| bromodomain-containing protein 2 [Gallus gallus]
gi|1370092|emb|CAA65449.1| kinase [Gallus gallus]
Length = 729
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 297 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 356
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 357 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 397
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|242091894|ref|XP_002436437.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
gi|241914660|gb|EER87804.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
Length = 346
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 17/247 (6%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---Y 261
LM+Q LL + SH+ W F PVDV+ L+IPDY +I PMD TI+ K+ Y
Sbjct: 79 LMRQFGVLLKEITSHKDAWPFLKPVDVVTLHIPDYHKIITQPMDFSTIQKKMERKDGTCY 138
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVD-MTAVP 320
++ +DVRL F+NAM YN QN VH+MA +L + FE +W K+
Sbjct: 139 TNVREICSDVRLIFANAMKYNDDQNVVHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEE 198
Query: 321 SRADDMIETETRMGMPPMKK------KKVSPKETKIKAEPVRRV--MTNEEKRILSTELE 372
S+ T + + + K +++ K +++ V R MT +EKR L +
Sbjct: 199 SKGVAATNTSREVAIAKLAKDTDDELNQINRKLEELRKMVVHRCRKMTTDEKRKLGAGIC 258
Query: 373 ALL-EELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQKQAN 431
L ++L +++ +++ + +T +E+++D+DA S+ TL+ L+ ++ E ++QAN
Sbjct: 259 HLSPDDLNKALEIVAQDNPSFQTKAEEVDLDMDAQSETTLWRLKF----FVREALERQAN 314
Query: 432 PGPCEME 438
+M+
Sbjct: 315 VASGKMD 321
>gi|402904600|ref|XP_003915131.1| PREDICTED: bromodomain-containing protein 4 [Papio anubis]
Length = 1300
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|183396808|ref|NP_001116861.1| bromodomain containing 3a [Danio rerio]
Length = 683
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 296 LKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 355
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 356 DAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 396
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KL +PDY +IK+PMD+GTIK ++ S Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|397484965|ref|XP_003813634.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Pan paniscus]
Length = 1362
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|19718731|ref|NP_490597.1| bromodomain-containing protein 4 isoform long [Homo sapiens]
gi|20141192|sp|O60885.2|BRD4_HUMAN RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Protein HUNK1
gi|16589003|gb|AAL26987.1|AF386649_1 bromodomain-containing 4 [Homo sapiens]
gi|119604879|gb|EAW84473.1| bromodomain containing 4, isoform CRA_d [Homo sapiens]
Length = 1362
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|332887140|dbj|BAJ53019.2| Bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 401
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|426230380|ref|XP_004009251.1| PREDICTED: bromodomain-containing protein 4 [Ovis aries]
Length = 1225
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 338 QHPAPDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 397
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 398 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 452
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|395146456|gb|AFN53616.1| BRD2 [Chrysolophus pictus]
Length = 733
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 401
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|384254936|gb|AFH75302.1| BRD2 [Lyrurus tetrix]
Length = 779
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 347 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 406
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 407 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 447
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 68 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 124 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|297703913|ref|XP_002828869.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Pongo
abelii]
Length = 1363
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|169730373|gb|ACA64774.1| bromodomain-containing protein 2 [Meleagris gallopavo]
Length = 779
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 347 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 406
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 407 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 447
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 68 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 124 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|115530796|emb|CAL49346.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
Length = 529
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVDV L + DY+ +IKHPMDL TIK K+ + ++
Sbjct: 344 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNREFK 403
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAA VRL FSN YNPP +DV MA L+ FE R+
Sbjct: 404 DAQEFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 444
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y L D
Sbjct: 86 VMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQDF 145
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQSLEKMF 173
>gi|357627183|gb|EHJ76955.1| putative bromodomain containing 3 [Danaus plexippus]
Length = 1323
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 85/184 (46%), Gaps = 25/184 (13%)
Query: 144 SCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGR----LEPKKPAGAAS 199
S G P ++ GGP K R +GR + G+ G L P GA +
Sbjct: 306 SFEGGYTTPTIDQQGGPKPA---KISTRRESGRQKKPGRVGDDGFKMGGLSPGV-GGAGA 361
Query: 200 SSNAML--------------MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTV 242
S +A L +K C +L L S + + W F PVD L + DYF +
Sbjct: 362 SHHAALTPQAAKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDI 421
Query: 243 IKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
IK PMDLGT+K + Y FAADVRL F+N YNPP +DV MA L+ FE+R
Sbjct: 422 IKKPMDLGTVKHNMDHRAYKTAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMR 481
Query: 303 WKAI 306
+ I
Sbjct: 482 YAKI 485
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 56/99 (56%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+N++ + H+F W F+ PVD KLN+PDY +IK PMDLGTIK ++ S Y
Sbjct: 69 KNVIKAVWKHKFAWPFHQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLESNYYYSAQECIQ 128
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D F+N YN P DV +MA TL K F R ++K
Sbjct: 129 DFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLNRIAQMDK 167
>gi|324500843|gb|ADY40384.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 1194
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ +++ L S + F W F PVDV L + DY+ ++K PMDLGTI+ K+ + QY+
Sbjct: 375 MKYCQRIISELFSKKCKSFTWPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQYA 434
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
P D+ L N YNPP + VH TL+KYFE +W+ +
Sbjct: 435 SPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKWRQM 478
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 186 SGRLEPK--KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI 243
+G ++P+ P G + L + +L M H+ W F PVD ++L++PDY VI
Sbjct: 98 NGIVQPRVIPPLGKPTRHTNQLEFILKEVLKPAMRHKHAWPFTKPVDAVRLSLPDYHKVI 157
Query: 244 KHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
K PMD+ TI+ ++ + Y D F+N +N ++DV +M + + +
Sbjct: 158 KRPMDMNTIEKRLRNVYYYSAKDCMQDFEAIFANCYKFNQNEDDVSLMCKNIENLYREKI 217
Query: 304 KAI 306
K +
Sbjct: 218 KLL 220
>gi|34392374|dbj|BAC82511.1| Serine threonine Kinase [Coturnix japonica]
Length = 735
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 401
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|332253606|ref|XP_003275928.1| PREDICTED: bromodomain-containing protein 4 isoform 1 [Nomascus
leucogenys]
Length = 1364
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|197304453|dbj|BAG69393.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 401
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|148356975|dbj|BAF62999.1| Bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304348|dbj|BAG69295.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304378|dbj|BAG69323.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304408|dbj|BAG69351.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304468|dbj|BAG69407.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304482|dbj|BAG69420.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304512|dbj|BAG69448.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304526|dbj|BAG69461.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863985|gb|ACY01481.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863995|gb|ACY01490.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 401
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|426387578|ref|XP_004060242.1| PREDICTED: bromodomain-containing protein 4 [Gorilla gorilla
gorilla]
Length = 1362
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|73959570|ref|XP_867048.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Canis
lupus familiaris]
Length = 668
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHLSYAWPFYNPVDVHALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE----KKLPVT---VD 315
D FAADVRL F N YNPP ++V MA L+ FE+ + I + +PV D
Sbjct: 333 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDEPIESMPVCYIKTD 392
Query: 316 MTAVPSR 322
T +P R
Sbjct: 393 TTKIPGR 399
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 11 VNPPPPEYLNTKKNGRLTNQLQYLQKIVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIK 70
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
PMDL TIK ++ Y D + FSN YN P +D+ +MA L K F
Sbjct: 71 TPMDLNTIKKRLEHKYYVRASECIEDFNIMFSNCYLYNKPGDDIVLMAQALEKLF 125
>gi|355752948|gb|EHH56994.1| hypothetical protein EGM_06545 [Macaca fascicularis]
Length = 726
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|120431736|ref|NP_473395.2| bromodomain testis-specific protein isoform A [Mus musculus]
gi|425906068|sp|Q91Y44.3|BRDT_MOUSE RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Bromodomain-containing female sterile homeotic-like
protein; AltName: Full=RING3-like protein
gi|148688221|gb|EDL20168.1| bromodomain, testis-specific [Mus musculus]
Length = 956
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L +++ + + W F PVD L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA TL+ FE+ + I
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKI 375
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD +KL +PDY+T+IK PMDL TIK ++ + Y D
Sbjct: 38 VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDF 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKTGDDIVVMAQALEKLF 125
>gi|197304540|dbj|BAG69474.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 401
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKLPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|410967748|ref|XP_003990377.1| PREDICTED: bromodomain testis-specific protein [Felis catus]
Length = 939
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA TL+ FE+ + I
Sbjct: 333 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFAKI 376
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 11 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKALWRHNFSWPFQQPVDAVKLKLPDYYTIIK 70
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
PMDL TIK ++ Y D + FSN YN P +D+ +MA L K F
Sbjct: 71 TPMDLNTIKKRLEHKYYMKASECIEDFNIMFSNCYLYNKPGDDIVLMAQALEKLF 125
>gi|13957951|gb|AAK50736.1| bromodomain-containing female sterile homeotic-like protein [Mus
musculus]
Length = 956
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L +++ + + W F PVD L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA TL+ FE+ + I
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKI 375
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD +KL +PDY+T+IK PMDL TIK ++ + Y D
Sbjct: 38 VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDF 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKTGDDIVVMAQALEKLF 125
>gi|2780775|dbj|BAA24377.1| Ring3 [Mus musculus]
Length = 549
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
+G + P + SV P++ LAP N P + N PKKP G ++ L
Sbjct: 40 EGFESPTMASV--PALQLAPA---------NPPPPEVSN-----PKKP-GRVTNQLQYLH 82
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K ++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y
Sbjct: 83 KV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASE 139
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 140 CMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|332255339|ref|XP_003276790.1| PREDICTED: bromodomain-containing protein 3 [Nomascus leucogenys]
Length = 726
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|194223682|ref|XP_001914731.1| PREDICTED: bromodomain-containing protein 4 [Equus caballus]
Length = 1364
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 75/133 (56%), Gaps = 6/133 (4%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD+
Sbjct: 342 PAPDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMS 401
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI--EK 308
TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ + E
Sbjct: 402 TIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEP 461
Query: 309 KLPVT-VDMTAVP 320
+ PV V AVP
Sbjct: 462 EEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|297685659|ref|XP_002820401.1| PREDICTED: bromodomain-containing protein 3 [Pongo abelii]
Length = 726
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|11067749|ref|NP_031397.1| bromodomain-containing protein 3 [Homo sapiens]
gi|12643726|sp|Q15059.1|BRD3_HUMAN RecName: Full=Bromodomain-containing protein 3; AltName:
Full=RING3-like protein
gi|46241518|gb|AAS82952.1| endothelial differentiation inhibitory protein D18 [Homo sapiens]
gi|119608519|gb|EAW88113.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|119608521|gb|EAW88115.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|168274318|dbj|BAG09579.1| bromodomain-containing protein 3 [synthetic construct]
Length = 726
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|7512236|pir||T28145 RING3 kinase - chicken
gi|3129967|emb|CAA18965.1| RING3 kinase [synthetic construct]
gi|197304363|dbj|BAG69309.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304393|dbj|BAG69337.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304423|dbj|BAG69365.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304438|dbj|BAG69379.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304497|dbj|BAG69434.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 401
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|402896155|ref|XP_003911172.1| PREDICTED: bromodomain-containing protein 3 [Papio anubis]
Length = 726
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|395847805|ref|XP_003796555.1| PREDICTED: bromodomain-containing protein 4 [Otolemur garnettii]
Length = 1366
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANTASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|397503778|ref|XP_003822496.1| PREDICTED: bromodomain-containing protein 3 [Pan paniscus]
Length = 728
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|291413178|ref|XP_002722853.1| PREDICTED: bromodomain-containing protein 4 [Oryctolagus cuniculus]
Length = 1346
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 34 QPQPANTASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 93
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 296 RKYF 299
K F
Sbjct: 154 EKLF 157
>gi|302564433|ref|NP_001181047.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|355567354|gb|EHH23695.1| hypothetical protein EGK_07225 [Macaca mulatta]
gi|383421773|gb|AFH34100.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|384949538|gb|AFI38374.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|387542198|gb|AFJ71726.1| bromodomain-containing protein 3 [Macaca mulatta]
Length = 726
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|40788944|dbj|BAA05393.2| KIAA0043 [Homo sapiens]
Length = 731
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 317 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 376
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 377 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 417
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 44 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 103
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 104 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 138
>gi|426363503|ref|XP_004048879.1| PREDICTED: bromodomain-containing protein 3 [Gorilla gorilla
gorilla]
Length = 726
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|114627431|ref|XP_001170358.1| PREDICTED: bromodomain-containing protein 3 isoform 8 [Pan
troglodytes]
gi|410223876|gb|JAA09157.1| bromodomain containing 3 [Pan troglodytes]
gi|410253994|gb|JAA14964.1| bromodomain containing 3 [Pan troglodytes]
gi|410301574|gb|JAA29387.1| bromodomain containing 3 [Pan troglodytes]
gi|410339465|gb|JAA38679.1| bromodomain containing 3 [Pan troglodytes]
Length = 726
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|443611854|gb|AGC96178.1| bromodomain-containing protein 2 [Tympanuchus cupido]
Length = 779
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ + Y
Sbjct: 347 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 406
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE +
Sbjct: 407 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 447
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 68 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 123
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 124 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|2780777|dbj|BAA24378.1| Ring3 [Mus musculus]
gi|2780779|dbj|BAA24379.1| Ring3 [Mus musculus]
Length = 503
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 403
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 22 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 77
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 78 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
>gi|441637323|ref|XP_004090057.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 872
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 259
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVT-VDMTAVPS 321
D FAADVRL F N YNPP ++V MA L+ FE + K+PV V+ T +
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF----SKIPVEPVESTPLCY 315
Query: 322 RADDMIETETR 332
D+ ET R
Sbjct: 316 IKTDITETTGR 326
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 53
>gi|3184498|gb|AAC27978.1| R31546_1 [Homo sapiens]
Length = 731
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 351 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 410
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 411 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 470
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 471 EPEEPVVAVSSPAVP 485
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 81 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 140
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 141 NTMFTNCYIYNKPGDDIVLMAEALEKLF 168
>gi|325652134|ref|NP_001191701.1| bromodomain-containing protein 4 [Sus scrofa]
gi|321172828|gb|ADW77216.1| bromodomain-containing protein 4 [Sus scrofa]
Length = 1368
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|403301507|ref|XP_003941429.1| PREDICTED: bromodomain-containing protein 3 [Saimiri boliviensis
boliviensis]
Length = 726
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|133777453|gb|AAI14644.1| BRD2 protein [Bos taurus]
Length = 558
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 69 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 124
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 125 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|345488359|ref|XP_003425887.1| PREDICTED: hypothetical protein LOC100119446 isoform 3 [Nasonia
vitripennis]
Length = 1549
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ +Y+
Sbjct: 396 LKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYN 455
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 456 TASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 499
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD KLN+PDY +IKH MDLGTIK ++ + Y D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA TL + F
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLF 163
>gi|383417065|gb|AFH31746.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
gi|387541550|gb|AFJ71402.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
Length = 721
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 75/133 (56%), Gaps = 6/133 (4%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD+
Sbjct: 342 PAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMS 401
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI--EK 308
TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ + E
Sbjct: 402 TIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEP 461
Query: 309 KLPVT-VDMTAVP 320
+ PV V AVP
Sbjct: 462 EEPVVAVSSPAVP 474
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|7657218|ref|NP_055114.1| bromodomain-containing protein 4 isoform short [Homo sapiens]
gi|3115204|emb|CAA72780.1| HUNKI [Homo sapiens]
gi|119604875|gb|EAW84469.1| bromodomain containing 4, isoform CRA_a [Homo sapiens]
gi|410224242|gb|JAA09340.1| bromodomain containing 4 [Pan troglodytes]
gi|410259614|gb|JAA17773.1| bromodomain containing 4 [Pan troglodytes]
gi|410299992|gb|JAA28596.1| bromodomain containing 4 [Pan troglodytes]
Length = 722
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|340729450|ref|XP_003403016.1| PREDICTED: homeotic protein female sterile-like, partial [Bombus
terrestris]
Length = 497
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPM 247
P+ G + + +K C +L L S + + W F PVD L + DY +IK PM
Sbjct: 1 PQHTTGKSKEKLSEALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPM 60
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
DLGT+K K+ + +Y FA+DVRL F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 61 DLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 119
>gi|308800642|ref|XP_003075102.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
gi|116061656|emb|CAL52374.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
Length = 1086
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 19/247 (7%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI-TSGQYS 262
++ KQC + +L++H++G+ F PVD L++P Y +IK PMDLGT+K I G+Y
Sbjct: 133 VVHKQCLTSVRQLIAHKWGFPFAAPVDPDALDLPTYREIIKEPMDLGTVKNLIENGGKYV 192
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAV--- 319
ADVRLTF+NAM +N DVH MA L +E RW I++++ V+ V
Sbjct: 193 KAEEVDADVRLTFANAMKFNAEGTDVHAMAKELLVEWETRWATIQQRI-ADVEACCVIER 251
Query: 320 ---------PSRADDMI--ETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILS 368
SR D++ E E + + E + + + R + +++ L+
Sbjct: 252 KAAEAKNEAASRRADVVSKEKECSKASEAIDLVNIQLGEVQNQVLALMRPLERDDRLNLA 311
Query: 369 TELEALLEELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQQK 428
+EL +L E L + + ++ G LE D+DA +D T+ L + + + +
Sbjct: 312 SELRSLPEGLRVGAREIIAANTTGWKPAAHLE-DVDAHNDLTIHLLARYTKT--MNRNRL 368
Query: 429 QANPGPC 435
N G C
Sbjct: 369 AINAGWC 375
>gi|55725298|emb|CAH89514.1| hypothetical protein [Pongo abelii]
Length = 546
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 450
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 187 GRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
G PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK P
Sbjct: 65 GVSNPKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQP 120
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 121 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
>gi|348505480|ref|XP_003440289.1| PREDICTED: bromodomain-containing protein 3-like [Oreochromis
niloticus]
Length = 513
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++L ++S + + W F PVD L + DY +IK+PMDL T+K K+ +G+Y
Sbjct: 190 LKYCNHILKEMLSKKHSAYAWPFYKPVDAEALQLHDYHDIIKYPMDLSTVKKKMDAGEYQ 249
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D AFAADVRL FSN YNP +DV I A L+ FE R+
Sbjct: 250 DAQAFAADVRLIFSNCYKYNPAHHDVVIKARKLQGIFEQRF 290
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD + L +PDY +I PMD+GTIK ++ + Y
Sbjct: 33 LQYMQNIVIKSLWRHQFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENNYYWSA 92
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K +
Sbjct: 93 SECLQDFNTMFTNCYIYNKPTDDIVLMALALEKIY 127
>gi|440800738|gb|ELR21773.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 904
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%)
Query: 188 RLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPM 247
R PKK + ++ +C+ ++T L+S W FN PVD + L IP YF +IK PM
Sbjct: 426 RRVPKKKVEKVDAMKGNILLECKKIMTSLISDTDAWPFNQPVDPVALGIPTYFDIIKEPM 485
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE 307
D GTI K+ +G+Y F DV L F+NA+ +N P +D+ A LR FE R +
Sbjct: 486 DFGTINQKLKNGKYEVLAQFERDVHLVFANALLFNEPDSDIGYWAKKLRGLFERRLVRVH 545
Query: 308 KKL 310
L
Sbjct: 546 NML 548
>gi|410053415|ref|XP_512452.4| PREDICTED: bromodomain-containing protein 4 [Pan troglodytes]
Length = 1161
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|345488355|ref|XP_003425886.1| PREDICTED: hypothetical protein LOC100119446 isoform 2 [Nasonia
vitripennis]
gi|345488361|ref|XP_003425888.1| PREDICTED: hypothetical protein LOC100119446 isoform 4 [Nasonia
vitripennis]
Length = 1555
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ +Y+
Sbjct: 396 LKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYN 455
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 456 TASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 499
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD KLN+PDY +IKH MDLGTIK ++ + Y D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA TL + F
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLF 163
>gi|449674634|ref|XP_002169264.2| PREDICTED: bromodomain-containing protein 4-like [Hydra
magnipapillata]
Length = 1019
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C L+ ++S + + W F PV L + DYF +IK PMDLGT+K K+ +YS
Sbjct: 302 LKYCNMLIKEMLSKKHEAYAWPFYKPVQAEALGLHDYFDIIKKPMDLGTVKFKMDCREYS 361
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTA 318
P FA DVRL F+N YNPP +DV MA L+ FE ++ + +L V ++A
Sbjct: 362 SPSDFATDVRLIFTNCYKYNPPDHDVVKMARKLQDVFEYKFAKMPDELCSPVAISA 417
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P K A + L + ++ ++ HQF W F PVD +KL IPDY+ + K PMD G
Sbjct: 5 PPKRAQKKGRTTNQLQFLLKTVMRQIQRHQFAWPFAKPVDAVKLKIPDYYEITKRPMDFG 64
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
TIK K+ Y+ + +L F+N YN P D+ IMA+ L K+F+
Sbjct: 65 TIKKKLEHNDYTCAKECIEEFKLVFTNCYGYNKPGEDIVIMAEVLEKFFD 114
>gi|444732332|gb|ELW72633.1| Bromodomain testis-specific protein [Tupaia chinensis]
Length = 556
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 40/244 (16%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 227 LRHCNEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQEYK 286
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
D FAADVRL F N YNPP ++V MA L + KA+ ++L V ++ VP R
Sbjct: 287 DAYEFAADVRLMFMNCYKYNPPDHEVVSMARML------QLKAVHQQLQV---LSQVPFR 337
Query: 323 -----------ADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRV------------- 358
+ R P K K++ KE +P +R
Sbjct: 338 KLKKKNEKSKREKKKAKVTNRDDNPRKKAKQMKLKEKPQSNQPKKRKQQVFALKSDEDNA 397
Query: 359 --MTNEEKRILSTELEALLEELPESIIDFL--KEHSAGETGEDELEIDIDALSDDTLFAL 414
M +EKR LS ++ L + ++ + +E S + DE+EID + L TL L
Sbjct: 398 KPMNYDEKRKLSLDINKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFETLKASTLREL 457
Query: 415 RKLL 418
K +
Sbjct: 458 EKYV 461
>gi|345488357|ref|XP_001603224.2| PREDICTED: hypothetical protein LOC100119446 isoform 1 [Nasonia
vitripennis]
Length = 1549
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ +Y+
Sbjct: 390 LKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYN 449
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 450 TASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 493
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD KLN+PDY +IKH MDLGTIK ++ + Y D+
Sbjct: 70 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA TL + F
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQTLERLF 157
>gi|395513633|ref|XP_003761027.1| PREDICTED: bromodomain-containing protein 4 [Sarcophilus harrisii]
Length = 1379
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++ + + + + W F PVDV L + DY +IKHPMDL TIK K+ + +Y
Sbjct: 375 LKYCTGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLETREYR 434
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 435 DAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 475
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 175 GRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKL 234
G N P + N P KP + +L + +L L HQF W F PVD +KL
Sbjct: 42 GSNPPPPETSN-----PNKPKRQTNQLQYLL----KVVLKTLWKHQFAWPFQQPVDAVKL 92
Query: 235 NIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADT 294
N+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+
Sbjct: 93 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAHECIQDFNTMFTNCYIYNKPGDDIVLMAEA 152
Query: 295 LRKYF 299
L K F
Sbjct: 153 LEKLF 157
>gi|339245937|ref|XP_003374602.1| putative bromodomain protein [Trichinella spiralis]
gi|316972199|gb|EFV55887.1| putative bromodomain protein [Trichinella spiralis]
Length = 847
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C ++ L+S ++ W F PVDV L + DY+ VI+ PMDLGT++ K+ +Y
Sbjct: 370 MKFCYGIVKELLSKRHSEYAWPFYKPVDVEGLGLHDYYDVIEVPMDLGTVRRKLECREYG 429
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
P FAADVRL FSN YNPP ++V MA T+ + FE R+
Sbjct: 430 SPSEFAADVRLIFSNCYRYNPPDHEVVKMAKTISEIFEQRF 470
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 186 SGRLEPK--KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI 243
+G ++P+ P G + + L + +L ++ H+ W F+ PVD KLN+ DY +I
Sbjct: 81 NGIVQPRVVAPPGKPTRNTNQLEFMQKEVLRAVLRHKHSWPFSKPVDAAKLNLVDYHDII 140
Query: 244 KHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K PMDLGTI+ ++ + Y D F+N TYNPP +D+ +MA L K F
Sbjct: 141 KRPMDLGTIEKRLRNCYYYSSQQSMQDFMTMFTNCYTYNPPGSDIVVMAQALEKVF 196
>gi|327264790|ref|XP_003217194.1| PREDICTED: bromodomain-containing protein 4-like [Anolis
carolinensis]
Length = 1344
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 199 SSSNAM--LMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
SSSN + +K C ++ + + + + W F PVDV L + DY +IKHPMDL TIK
Sbjct: 347 SSSNKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYRDIIKHPMDLSTIK 406
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
K+ + Y D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 407 SKLENRDYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 456
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQCENLLT----RLMSHQFGWVFNTPVDVMKLNIPDY 239
GN+ P P + + + Q + LL L HQF W F PVD +KL +PDY
Sbjct: 38 GNTLSTNPSPPETSNPNKPKRMTNQLQYLLKVVLKTLWKHQFSWPFQQPVDAVKLQLPDY 97
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L K F
Sbjct: 98 YKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|332221880|ref|XP_003260091.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Nomascus
leucogenys]
gi|441637320|ref|XP_004090056.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 899
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 286
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV-TVDMTAVPS 321
D FAADVRL F N YNPP ++V MA L+ FE + K+PV V+ T +
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF----SKIPVEPVESTPLCY 342
Query: 322 RADDMIETETR 332
D+ ET R
Sbjct: 343 IKTDITETTGR 353
>gi|332253608|ref|XP_003275929.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Nomascus
leucogenys]
Length = 722
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|345326866|ref|XP_001506320.2| PREDICTED: bromodomain-containing protein 4 [Ornithorhynchus
anatinus]
Length = 719
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P+ ES PS+ PK K P + K + ++ S+ + +K C
Sbjct: 301 PIHES---PSLAAEPKSAKLGPRRESSRPVKPPKKDVPDSQQHVAEKSNKISEQLKYCSG 357
Query: 212 LLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
++ + + + + W F PVDV L + DY +IKHPMDL TIK K+ + +Y D FA
Sbjct: 358 IIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFA 417
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 418 ADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 452
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 175 GRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKL 234
G N P + N P KP + +L + +L L HQF W F PVD +KL
Sbjct: 42 GSNPPPPETSN-----PNKPKRQTNQLQYLL----KVVLKTLWKHQFAWPFQQPVDAVKL 92
Query: 235 NIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADT 294
N+PDY+ +IK PMD+GTI+ ++ + Y + D F+N YN P +D+ +MA+
Sbjct: 93 NLPDYYKIIKTPMDMGTIRKRLENNYYWNAHECIQDFNTMFTNCYIYNKPGDDIVLMAEA 152
Query: 295 LRKYF 299
L K F
Sbjct: 153 LEKLF 157
>gi|89267975|emb|CAJ81450.1| bromodomain, testis-specific [Xenopus (Silurana) tropicalis]
Length = 438
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IKHPMDL ++K K+ + +Y+
Sbjct: 321 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDAREYA 380
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D AFAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 381 DAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 421
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y D F
Sbjct: 3 LWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDFNTMF 62
Query: 276 SNAMTYNPPQNDVHIMADTLRKYF 299
+N YN +D+ +MA L K F
Sbjct: 63 TNCYIYNKSTDDIVLMAQALEKIF 86
>gi|301113438|ref|XP_002998489.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111790|gb|EEY69842.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 910
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL +LM ++GW FN PVD ++ NIPDYF +IK PMDLGTIK ++ + Y+ AFA DV
Sbjct: 114 LLQKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHYNSVEAFAGDV 173
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
RL F N + YN N +I A L F
Sbjct: 174 RLVFENCIAYNSSTNKFNIAAKQLLASF 201
>gi|255072301|ref|XP_002499825.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226515087|gb|ACO61083.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 675
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI-TSGQYS 262
++ +QC L +LM+H++ FN PVD + LN+P Y ++K PMDLGT++ I G Y+
Sbjct: 287 VVNRQCLAALKQLMAHKWAHPFNKPVDHVALNLPTYPEIVKRPMDLGTVEANIRKGGVYA 346
Query: 263 DPLAFAADVRLTFSNAMTYNP-PQNDVHIMADTLRKYFEVRWKAI 306
ADV L FSNA T+ P P+ DVH+MA L +++ RW A+
Sbjct: 347 CAEEVHADVSLVFSNAKTFTPKPEMDVHVMAVALEEFWAQRWAAV 391
>gi|338797768|ref|NP_001229739.1| bromodomain testis-specific protein isoform d [Homo sapiens]
gi|119593515|gb|EAW73109.1| bromodomain, testis-specific, isoform CRA_b [Homo sapiens]
Length = 874
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 259
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 53
>gi|2554915|gb|AAB87862.1| BRDT [Homo sapiens]
Length = 947
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D +FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYSFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|74354344|gb|AAI03774.1| Brd4 protein, partial [Mus musculus]
Length = 557
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|74181884|dbj|BAE32643.1| unnamed protein product [Mus musculus]
Length = 545
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|167391721|ref|XP_001739904.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165896243|gb|EDR23718.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 264
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
P T+ + +E +KP N+ + C N++ +LM VF PVD NIP+
Sbjct: 39 PMTRSMSGYEVE-EKPVIKNEPLNSFEKELCMNVMKQLMKVSESEVFMEPVDPEIWNIPN 97
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
YF +IK PMDLGT+ KI Y F+ DVRLTF+NAMT+NPP N VH A+ L K
Sbjct: 98 YFEIIKTPMDLGTVIKKIKKNMYYSIDQFSNDVRLTFTNAMTFNPPGNYVHSYAEKLYKI 157
Query: 299 FEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPV 355
FE ++ +KL + +++++++ + P+ + ++ K+K P+
Sbjct: 158 FENYYRHCIRKLNYHL------KEENNLLQSKKKYSQKPLNRSEMHYLTQKMKNIPL 208
>gi|52350614|gb|AAH82782.1| Brd4 protein, partial [Mus musculus]
Length = 582
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|12802525|gb|AAK07919.1|AF318183_1 ring 3 [Mus musculus]
Length = 503
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
+G + P + SV P++ LAP N P + N PKKP G ++ L
Sbjct: 40 EGFESPTMASV--PALQLAPA---------NPPPPEVSN-----PKKP-GRVTNQLQYLH 82
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K ++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y
Sbjct: 83 KV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASE 139
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 140 CMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|71681018|gb|AAI00642.1| Brd4 protein, partial [Rattus norvegicus]
Length = 566
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 341 QHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 400
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 401 MSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
Query: 307 EKKLP-VTVDMTAVP 320
E + P VTV AVP
Sbjct: 461 EPEEPVVTVSSPAVP 475
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|123233748|emb|CAM17899.1| bromodomain containing 2 [Mus musculus]
Length = 473
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
+G + P + SV P++ LAP N P + N PKKP G ++ L
Sbjct: 40 EGFESPTMASV--PALQLAPA---------NPPPPEVSN-----PKKP-GRVTNQLQYLH 82
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K ++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y
Sbjct: 83 KV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASE 139
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 140 CMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
>gi|74190894|dbj|BAE28228.1| unnamed protein product [Mus musculus]
Length = 473
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 449
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 147 DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLM 206
+G + P + SV P++ LAP N P + N PKKP G ++ L
Sbjct: 40 EGFESPTMASV--PALQLAPA---------NPPPPEVSN-----PKKP-GRVTNQLQYLH 82
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K ++ L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y
Sbjct: 83 KV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASE 139
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL+K F
Sbjct: 140 CMQDFNTMFTNCYIYNKPTDDIVLMAQTLKKIF 172
>gi|332221876|ref|XP_003260089.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Nomascus
leucogenys]
gi|332221878|ref|XP_003260090.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Nomascus
leucogenys]
gi|441637315|ref|XP_004090055.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 945
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVT-VDMTAVPS 321
D FAADVRL F N YNPP ++V MA L+ FE + K+PV V+ T +
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF----SKIPVEPVESTPLCY 388
Query: 322 RADDMIETETR 332
D+ ET R
Sbjct: 389 IKTDITETTGR 399
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|198425802|ref|XP_002127242.1| PREDICTED: similar to bromodomain-containing protein 2 [Ciona
intestinalis]
Length = 1083
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++T L H F W F+ PVD +KL +PDYF +IKHPMD+ IK K+ + QY D
Sbjct: 46 VMTSLWKHHFAWPFHVPVDPVKLGLPDYFDIIKHPMDMALIKKKLETNQYYSAKECLQDF 105
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
L FSN YN P +DV +MA TL K F
Sbjct: 106 NLMFSNCYIYNKPTDDVVLMAQTLEKNF 133
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C NLL S + F W F VD L + DY+ +IK+PMDLGT++ K+ S +Y
Sbjct: 359 MKYCNNLLKDFFSKKHASFSWPFYKSVDADLLGLHDYYDMIKNPMDLGTMRKKMESREYR 418
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
P FA D+RL +N YNPP +DV MA L FE+++
Sbjct: 419 TPDEFAYDMRLIVTNCYKYNPPDHDVVAMAKKLSDVFEMKF 459
>gi|71052031|gb|AAH35266.1| BRD4 protein [Homo sapiens]
gi|119604876|gb|EAW84470.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
gi|119604877|gb|EAW84471.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
Length = 794
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|63100514|gb|AAH95027.1| Brd3a protein [Danio rerio]
Length = 513
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 296 LKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 355
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 356 DAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 396
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L HQF W F PVD +KL +PDY +IK+PMD+GTIK ++ S Y D
Sbjct: 42 VVETLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQDF 101
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA L K F
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|358055176|dbj|GAA98945.1| hypothetical protein E5Q_05633 [Mixia osmundae IAM 14324]
Length = 754
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 51/310 (16%)
Query: 160 PSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPA-----------GAASSSNAMLMKQ 208
PSV + P ++ + +GR+ + + + LE A G++S S +K
Sbjct: 382 PSVSMVPNIRRNSADGRSKREIRPPSQYDLEDSLTASGKRKGKKRKFGSSSKSIQEGLKF 441
Query: 209 CENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
C++++ + H +F + F PVD LNIPDY V++HPMDLGT+K ++ +G Y+
Sbjct: 442 CKDIIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMKRRLDAGYYNHAS 501
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVD---------- 315
F AD RL N +NP + VH M L +FE RW+ P T +
Sbjct: 502 EFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWRDKPASRPETEEPDSDYESDPE 561
Query: 316 ----MTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRV------------- 358
+ A+ + D+ T + P KK K S +
Sbjct: 562 KRSKILAIERQIADLQNTLAELKEPAKKKAKSSRPSYGSTKKSKSYSKSGKPKTGQKGKA 621
Query: 359 --------MTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGED--ELEIDIDALSD 408
+T E KR L+ ++ E ID ++ G++ E+E+DIDAL
Sbjct: 622 SDGDDDGGITFEMKRELANKITTFEGAKLEQAIDIIRSAEPHLLGDESKEIELDIDALDP 681
Query: 409 DTLFALRKLL 418
TL L + +
Sbjct: 682 QTLLKLYQFV 691
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K C + L ++ F PVD + L IP YF I++PMDL T++ + + +Y+
Sbjct: 225 KFCLATVRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANEYASVEE 284
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F ++V+L F N +N ++ + +MA L F
Sbjct: 285 FRSEVKLVFDNCCAFNREESPIGLMARRLEGAF 317
>gi|260943750|ref|XP_002616173.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
gi|238849822|gb|EEQ39286.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
Length = 613
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 203 AMLMKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
A+ ++ C ++ LMS +F + F PVD + LNIP+YF ++K PMDLG+I+ K+ +
Sbjct: 281 AVELRFCNQVIKELMSKKFYSINFPFLQPVDPVALNIPNYFDIVKEPMDLGSIQTKLANN 340
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
QY + F DVRL F N +NP NDVH M L + F+ +W
Sbjct: 341 QYENGDEFEKDVRLVFKNCYLFNPEGNDVHSMGQRLEQVFDKKW 384
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 214 TRLMSHQFGWVFNT---------------PVDVMKLNIPDYFTVIKHPMDLGTIKCKITS 258
T + HQ +V NT PVDV+KLN+P Y+ IK PMDL TI+ K+
Sbjct: 113 TPMPKHQAKFVLNTIKAIKRLRDAGPFLHPVDVVKLNVPLYYNYIKRPMDLSTIERKLNL 172
Query: 259 GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
Y DP D L SN + +N + + MA ++ FE I K+ V
Sbjct: 173 NAYEDPSQVVDDFNLMVSNCLRFNGENSGISRMAKNIQAQFEKHMLNIPPKVMV 226
>gi|426218805|ref|XP_004003627.1| PREDICTED: bromodomain testis-specific protein [Ovis aries]
Length = 969
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L ++ + + W F PVDV L + +Y+ ++K PMDLGTIK K+ + +Y
Sbjct: 307 LRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYK 366
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FEV + I
Sbjct: 367 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEVHFAKI 410
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 46 VNPPPPECINTKKNGRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIK 105
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ Y D FSN YN P +D+ +MA L K F
Sbjct: 106 NPMDLNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 160
>gi|358055177|dbj|GAA98946.1| hypothetical protein E5Q_05634 [Mixia osmundae IAM 14324]
Length = 750
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 51/310 (16%)
Query: 160 PSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPA-----------GAASSSNAMLMKQ 208
PSV + P ++ + +GR+ + + + LE A G++S S +K
Sbjct: 378 PSVSMVPNIRRNSADGRSKREIRPPSQYDLEDSLTASGKRKGKKRKFGSSSKSIQEGLKF 437
Query: 209 CENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
C++++ + H +F + F PVD LNIPDY V++HPMDLGT+K ++ +G Y+
Sbjct: 438 CKDIIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMKRRLDAGYYNHAS 497
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVD---------- 315
F AD RL N +NP + VH M L +FE RW+ P T +
Sbjct: 498 EFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWRDKPASRPETEEPDSDYESDPE 557
Query: 316 ----MTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRV------------- 358
+ A+ + D+ T + P KK K S +
Sbjct: 558 KRSKILAIERQIADLQNTLAELKEPAKKKAKSSRPSYGSTKKSKSYSKSGKPKTGQKGKA 617
Query: 359 --------MTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGED--ELEIDIDALSD 408
+T E KR L+ ++ E ID ++ G++ E+E+DIDAL
Sbjct: 618 SDGDDDGGITFEMKRELANKITTFEGAKLEQAIDIIRSAEPHLLGDESKEIELDIDALDP 677
Query: 409 DTLFALRKLL 418
TL L + +
Sbjct: 678 QTLLKLYQFV 687
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K C + L ++ F PVD + L IP YF I++PMDL T++ + + +Y+
Sbjct: 221 KFCLATVRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANEYASVEE 280
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F ++V+L F N +N ++ + +MA L F
Sbjct: 281 FRSEVKLVFDNCCAFNREESPIGLMARRLEGAF 313
>gi|392332962|ref|XP_003752750.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
gi|149028625|gb|EDL83966.1| bromodomain, testis-specific [Rattus norvegicus]
Length = 947
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ +Y
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD KL +PDY+T+I+ PMDL TIK ++ + Y D
Sbjct: 38 VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDF 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN P +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKPGDDIVVMAQALEKLF 125
>gi|33416865|gb|AAH55543.1| Brd3a protein [Danio rerio]
Length = 515
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 295 LKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 354
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 355 DAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 395
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KL +PDY +IK+PMD+GTIK ++ S Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|392352984|ref|XP_003751370.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
Length = 947
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ +Y
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD KL +PDY+T+I+ PMDL TIK ++ + Y D
Sbjct: 38 VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDF 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN P +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKPGDDIVVMAQALEKLF 125
>gi|444519215|gb|ELV12653.1| Guanine nucleotide exchange factor VAV2 [Tupaia chinensis]
Length = 1580
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 265 LRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 324
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 325 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 365
>gi|348513555|ref|XP_003444307.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 810
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C ++L L+S + + W F PVD L + DY +I HPMDL TIK K+ +Y
Sbjct: 265 LRCCNDILKELLSKRHSAYAWPFYVPVDAAALGLHDYHDIITHPMDLSTIKKKMDQREYG 324
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ FAADVRL FSN YNPP N+V MA L++ FE R+
Sbjct: 325 NAKEFAADVRLMFSNCYKYNPPSNEVVHMARKLQEVFEARY 365
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQ+ W F+ PVD + L +PDY+T+I +PMDLGTIK ++ + Y + D
Sbjct: 39 VLQALWRHQYSWPFHQPVDAVALCLPDYYTIITNPMDLGTIKKRLKNSYYWQAVDCIDDF 98
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ MA TL K F
Sbjct: 99 NTMFTNCYVYNQPGDDIVFMAKTLEKLF 126
>gi|356558209|ref|XP_003547400.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 349
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 198 ASSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
A+SSN M +M Q + ++ ++ W F PVDV L + DY+ +I+ PMD GTIK K
Sbjct: 81 ANSSNTMKEVMHQFSIIFHQITHQRWAWPFMEPVDVEGLGLHDYYQIIEKPMDFGTIKRK 140
Query: 256 ITSGQ---YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ + Y + +DVRL F NAM YN +NDVHIMA TL + FE +W
Sbjct: 141 MNAKDGSGYKNVREIYSDVRLVFENAMKYNGEKNDVHIMAKTLLEKFEKKW 191
>gi|426020760|sp|D4A7T3.1|BRDT_RAT RecName: Full=Bromodomain testis-specific protein
Length = 952
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ +Y
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD KL +PDY+T+I+ PMDL TIK ++ + Y D
Sbjct: 38 VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDF 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN P +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKPGDDIVVMAQALEKLF 125
>gi|338797761|ref|NP_001229737.1| bromodomain testis-specific protein isoform c [Homo sapiens]
gi|338797763|ref|NP_001229736.1| bromodomain testis-specific protein isoform c [Homo sapiens]
Length = 901
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|350416106|ref|XP_003490842.1| PREDICTED: homeotic protein female sterile-like isoform 2 [Bombus
impatiens]
Length = 1452
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 70/127 (55%), Gaps = 7/127 (5%)
Query: 186 SGRLEPKKPAGAASSSNAML---MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDY 239
SGR + KKP S L +K C +L L S + + W F PVD L + DY
Sbjct: 356 SGR-QIKKPQHTTGKSKEKLSEALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDY 414
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+IK PMDLGT+K K+ + +Y FA+DVRL F+N YNPP +DV MA L+ F
Sbjct: 415 HDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVF 474
Query: 300 EVRWKAI 306
E+R+ I
Sbjct: 475 EMRYAKI 481
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L + HQF W F PVD KLN+PDY +IK PMDLGTIK ++ + Y D
Sbjct: 70 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA L K F
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQALEKLF 157
>gi|221046272|dbj|BAH14813.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|221044240|dbj|BAH13797.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|432888948|ref|XP_004075102.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 460
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 37/232 (15%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++L ++S + + W F PVD L + DY +IK+PMDL T+K K+ +G Y
Sbjct: 230 LKYCSDILKEMLSKKHSMYAWPFYKPVDAEALGLHDYHDIIKYPMDLSTVKKKMDAGDYQ 289
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
D F+ADVRL FSN YNPPQ+ V MA L+ FE ++ + ++ + V +
Sbjct: 290 DAEQFSADVRLIFSNCYKYNPPQHSVVGMARKLQGVFEQKFAKMPEE-----QLQTVHQQ 344
Query: 323 ADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESI 382
++ T+ P M K++ ET+ K + RV+ IL T+
Sbjct: 345 LSNL--TQDPFNKPKMSKEQEREPETQHKK--LGRVV-----HILKTQ------------ 383
Query: 383 IDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYL---LEKQQKQAN 431
E S + DE+EID + L TL L + + L +K QKQ++
Sbjct: 384 -----EPSMSSSNPDEIEIDFEVLKPSTLRELERYVRSCLHKRFKKYQKQSS 430
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+K N++ + L H F W F PVD + L +PDY +I PMD+GTIK ++ + Y
Sbjct: 78 LKYMHNVVIKSLWRHPFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENNYYWSA 137
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 138 SECMEDFNTMFTNCYIYNKPTDDIVLMALPLEKIF 172
>gi|281343180|gb|EFB18764.1| hypothetical protein PANDA_018131 [Ailuropoda melanoleuca]
Length = 1230
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPVPDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|116283313|gb|AAH04832.1| Brd3 protein [Mus musculus]
Length = 501
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>gi|410033225|ref|XP_003949509.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 797
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 259
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 1 MDLNTIKKRLENKYYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 53
>gi|334321601|ref|XP_001377106.2| PREDICTED: bromodomain testis-specific protein [Monodelphis
domestica]
Length = 1066
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + + + + W F PVDV L + +Y+ V+K PMDLGTIK K+ + +Y
Sbjct: 274 LKYCNEILKEMFAKKHLAYAWPFYKPVDVTALGLHNYYDVVKSPMDLGTIKKKMDNQEYK 333
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA TL+ FE+++ I
Sbjct: 334 DAHEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMQFAKI 377
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD KL +PDY+++IK
Sbjct: 11 VNPPPPEYINAKKNGRLTNQLQYLQKVVLKALWRHSFSWPFQQPVDAAKLKLPDYYSIIK 70
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
PMDL TIK ++ Y D++ F+N YN P +D+ +MA L K F
Sbjct: 71 KPMDLSTIKKRLEHKYYVKSSECVEDLKTMFTNCYLYNKPGDDIVLMAQALEKLF 125
>gi|351711490|gb|EHB14409.1| Bromodomain-containing protein 4 [Heterocephalus glaber]
Length = 1225
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + + + + W F PVDV L + DY +IKHPMD+ TIK K+ S +Y
Sbjct: 365 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 424
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 425 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 465
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLN 235
Q + N+ P P + + Q + LL L HQF W F PVD +KLN
Sbjct: 68 QPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN 127
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
+PDY+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L
Sbjct: 128 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 187
Query: 296 RKYF 299
K F
Sbjct: 188 EKLF 191
>gi|338797757|ref|NP_001229735.1| bromodomain testis-specific protein isoform a [Homo sapiens]
Length = 951
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 277 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 336
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 337 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 380
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|301785596|ref|XP_002928216.1| PREDICTED: bromodomain-containing protein 4-like [Ailuropoda
melanoleuca]
Length = 1260
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPVPDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|46399198|ref|NP_001717.2| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|46399200|ref|NP_997072.1| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|338797755|ref|NP_001229734.1| bromodomain testis-specific protein isoform b [Homo sapiens]
Length = 947
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|355673420|gb|AER95166.1| bromodomain containing 2 [Mustela putorius furo]
Length = 613
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+ K+ + Y
Sbjct: 358 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVXRKMENRDYR 417
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 418 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 458
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 77 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 132
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 133 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 181
>gi|221044398|dbj|BAH13876.1| unnamed protein product [Homo sapiens]
Length = 951
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 277 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 336
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 337 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 380
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKNLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|119593512|gb|EAW73106.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593513|gb|EAW73107.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593514|gb|EAW73108.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593516|gb|EAW73110.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593517|gb|EAW73111.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|208965898|dbj|BAG72963.1| bromodomain, testis-specific [synthetic construct]
Length = 947
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|242009661|ref|XP_002425601.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
gi|212509494|gb|EEB12863.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
Length = 803
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 194 PAGAASSSN----AMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHP 246
P+G S S+ + +K C +L L S + + W F PVD L + DY +IK P
Sbjct: 337 PSGPTSGSSKEKLSESLKSCNEILKELFSRKHAGYAWPFYKPVDAELLGLHDYHEIIKKP 396
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
MDLGT+K K+ + QY FAADVRL F+N YNP +DV MA L+ FE+R+ I
Sbjct: 397 MDLGTVKTKMDNRQYRTASEFAADVRLIFTNCYKYNPSTHDVVAMARKLQDVFEMRYAKI 456
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+N++ + +H++ W PVD KLN+PDY +IK PMDL TIK ++ + Y +
Sbjct: 62 KNVIKAVCAHKYAWPLLEPVDAKKLNLPDYHRIIKQPMDLTTIKKRLENNYYWNAKECIQ 121
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRA 323
D F+N YN PQ DV +MA + K F + + K+ +++ VP +
Sbjct: 122 DFNTMFTNCYVYNQPQEDVVVMAQIVEKLFLTKISTLPKE---EIELEPVPPKG 172
>gi|380792783|gb|AFE68267.1| bromodomain-containing protein 4 isoform short, partial [Macaca
mulatta]
Length = 553
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|350416103|ref|XP_003490841.1| PREDICTED: homeotic protein female sterile-like isoform 1 [Bombus
impatiens]
Length = 1486
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 412 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYK 471
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA+DVRL F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 472 TAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L + HQF W F PVD KLN+PDY +IK PMDLGTIK ++ + Y D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA L K F
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLF 165
>gi|33355659|gb|AAQ16198.1| testis-specific BRDT protein [Homo sapiens]
Length = 960
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 286 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 345
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 346 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 389
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 25 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 84
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 85 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 139
>gi|226694198|sp|Q58F21.4|BRDT_HUMAN RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Cancer/testis antigen 9; Short=CT9; AltName:
Full=RING3-like protein
gi|108752098|gb|AAI11928.1| BRDT protein [synthetic construct]
gi|110645559|gb|AAI18499.1| BRDT protein [synthetic construct]
Length = 947
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|26345416|dbj|BAC36359.1| unnamed protein product [Mus musculus]
Length = 505
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>gi|355558166|gb|EHH14946.1| hypothetical protein EGK_00962, partial [Macaca mulatta]
Length = 897
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 280 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 339
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 340 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 383
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 19 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 78
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 79 NPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 133
>gi|194211115|ref|XP_001493233.2| PREDICTED: bromodomain testis-specific protein-like isoform 2
[Equus caballus]
Length = 928
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K PMDLGTIK K+ + +Y
Sbjct: 272 LRHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDVVKKPMDLGTIKGKMDNQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 332 DAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N + Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 11 VNPPPPEYINAKKNGRITNQLQYLQKVVLKALWKHGFSWPFQQPVDAVKLQLPDYYTIIK 70
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TI+ ++ Y D FSN YN P +D+ +MA L K F
Sbjct: 71 NPMDLNTIQKRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 125
>gi|26332152|dbj|BAC29806.1| unnamed protein product [Mus musculus]
Length = 511
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
>gi|402855238|ref|XP_003892238.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Papio
anubis]
gi|402855240|ref|XP_003892239.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Papio
anubis]
Length = 899
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|45501005|gb|AAH67129.1| BRD4 protein, partial [Homo sapiens]
gi|116283901|gb|AAH47888.1| BRD4 protein [Homo sapiens]
Length = 548
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|60649450|gb|AAH91649.1| BRD4 protein, partial [Homo sapiens]
Length = 550
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|116283228|gb|AAH00156.1| BRD4 protein [Homo sapiens]
gi|116283846|gb|AAH38988.1| BRD4 protein [Homo sapiens]
Length = 549
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|33879612|gb|AAH30158.1| BRD4 protein, partial [Homo sapiens]
Length = 548
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|383859381|ref|XP_003705173.1| PREDICTED: homeotic protein female sterile-like [Megachile
rotundata]
Length = 1489
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 412 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYK 471
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA+DVRL F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 472 TAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L + HQF W F PVD KLN+PDY +IK PMDLGTIK ++ + Y D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA L K F
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLF 165
>gi|410950660|ref|XP_003982021.1| PREDICTED: bromodomain-containing protein 4 [Felis catus]
Length = 720
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD+
Sbjct: 342 PVSDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMS 401
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI--EK 308
TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ + E
Sbjct: 402 TIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEP 461
Query: 309 KLPVT-VDMTAVP 320
+ PV V AVP
Sbjct: 462 EEPVVAVSSPAVP 474
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|345311855|ref|XP_001520339.2| PREDICTED: bromodomain testis-specific protein-like, partial
[Ornithorhynchus anatinus]
Length = 431
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + Y
Sbjct: 278 LKHCNEILKELFSKKHLSYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMNNQNYK 337
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP +++ MA TL+ FE+++ I
Sbjct: 338 DAHEFAADVRLMFMNCYKYNPPDHEIVGMARTLQDVFEMQFAKI 381
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N + Q + L + + H F W F PVD +KL +PDY+ +IK
Sbjct: 10 VNPPPPEYINTKKNGRITNQLQYLQKVVIKAIWKHSFSWPFQQPVDAVKLRLPDYYRIIK 69
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ Y D F+N YN P +D+ +MA L K F
Sbjct: 70 NPMDLSTIKKRLEYKYYVKASECVEDFNTMFTNCYLYNKPGDDIVLMAQALEKVF 124
>gi|307182453|gb|EFN69688.1| Homeotic protein female sterile [Camponotus floridanus]
Length = 1541
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++L L + + + W F PVD L + DY +IK PMDLGT+K K+ + QY
Sbjct: 436 LKSCNDILKELFAKKHSSYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKAKMDNRQYK 495
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA+DVRL F+N YNPP +DV MA L+ FE+R+ +
Sbjct: 496 TAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKV 539
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L + HQF W F PVD KLN+PDY +IK PMDLGTIK ++ + Y D
Sbjct: 101 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 160
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA L K F
Sbjct: 161 NTMFTNCYVYNKPGEDVVVMAQALEKLF 188
>gi|432109400|gb|ELK33657.1| Bromodomain-containing protein 4 [Myotis davidii]
Length = 1183
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 337 QHPALDKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 396
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 397 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 451
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|261278848|pdb|3JVL|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
gi|261278849|pdb|3JVM|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
Length = 120
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
GA S + +K C +L + + + + W F PVDV L + DY +IKHPMD+ TI
Sbjct: 1 GAMGSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTI 60
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
K K+ S +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 61 KSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 111
>gi|426330336|ref|XP_004026173.1| PREDICTED: bromodomain testis-specific protein [Gorilla gorilla
gorilla]
Length = 883
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVD+ L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 210 LRHCSEILKEMLAKKHFSYAWPFYNPVDINALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 269
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 270 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 313
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DY+T+IK+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K
Sbjct: 2 DYYTIIKNPMDLNTIKKRLENKYYGKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEK 61
Query: 298 YF 299
F
Sbjct: 62 LF 63
>gi|332809506|ref|XP_003339041.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
gi|332809508|ref|XP_003308259.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
troglodytes]
Length = 824
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|397473969|ref|XP_003808466.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
paniscus]
gi|397473971|ref|XP_003808467.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Pan
paniscus]
Length = 901
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|328788637|ref|XP_624214.3| PREDICTED: hypothetical protein LOC551826 [Apis mellifera]
Length = 1492
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 412 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYK 471
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA+DVRL F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 472 TAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L + HQF W F PVD KLN+PDY +IK PMDLGTIK ++ + Y D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA L K F
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLF 165
>gi|170587322|ref|XP_001898426.1| Bromodomain containing protein [Brugia malayi]
gi|158594150|gb|EDP32738.1| Bromodomain containing protein [Brugia malayi]
Length = 960
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 13/134 (9%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ L+ L + + F W F PVDV L + DY+ ++K+PMDLGTI+ K+ + QY+
Sbjct: 402 MKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYA 461
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVD------- 315
P ADV L N YNP + +H L+KYFE +W+ + ++ P+TVD
Sbjct: 462 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWRQMPEE-PLTVDEGTTAVQ 520
Query: 316 --MTAVPSRADDMI 327
TA+P+ ++
Sbjct: 521 VVATAIPAPVSHVV 534
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 46/171 (26%)
Query: 174 NGRNGPQTKKGNSGRLEPK--KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDV 231
NG P+ + N G ++P+ P G + L + +L M H+ W F PVD
Sbjct: 83 NGWESPRQEAIN-GVVQPRVIPPPGKPTRHTNQLEFMLKEVLKPAMRHKHAWPFMKPVDA 141
Query: 232 MKLNIPDYFTVIKHPMDLGTIK-----CKITSG----QYSDPLAF--------------- 267
++L +PDY VIK PMD+ TI+ C S Q S PL F
Sbjct: 142 VRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSAKDCMQVSRPLFFELETECIWTFTERAT 201
Query: 268 -------------------AADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ DV F+N TYNPP+ V++MA L +Y
Sbjct: 202 STGIYASDCVMTYFEFFNSSDDVMTMFNNCYTYNPPEYGVYMMAKNLEQYI 252
>gi|332026521|gb|EGI66642.1| Bromodomain-containing protein 2 [Acromyrmex echinatior]
Length = 1559
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++L L + + + W F PVD L + DY +IK PMDLGT+K K+ + QY
Sbjct: 452 LKSCNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRQYK 511
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA+DVRL F+N YNPP +DV MA L+ FE+R+ +
Sbjct: 512 TAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKV 555
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L + HQF W F PVD KL++PDY +IK PMDLGTIK ++ + Y D
Sbjct: 116 VLKPVWKHQFAWPFQQPVDAKKLSLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 175
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P DV +MA L K F
Sbjct: 176 NTMFTNCYVYNKPGEDVVVMAQALEKLF 203
>gi|219118433|ref|XP_002179989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408246|gb|EEC48180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1603
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%)
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVR 272
L L SHQ WVFNTPVD ++L +PDYF VIK PMDLGTI+ K+ +G Y F V
Sbjct: 582 LKTLQSHQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKLENGVYQRLDDFKEHVL 641
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETR 332
LTF NAM YNP + V+ MA+ ++ F+ + + ++L D+ A + E
Sbjct: 642 LTFDNAMMYNPEGSVVYNMANEMKVKFQSDFVKLMEQLNAEEDVKRKNGEACCLCGCEKL 701
Query: 333 MGMPPM 338
+ PP+
Sbjct: 702 LFEPPV 707
>gi|345787686|ref|XP_541985.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
isoform 1 [Canis lupus familiaris]
Length = 1360
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 340 QHPVPDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 399
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 400 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 459
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 460 EPEEPVVAVSSPAVP 474
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|148725667|emb|CAN87975.1| novel protein (zgc:77289) [Danio rerio]
Length = 729
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L ++S + + W F PVD L + DY +IK PMDL T+K K+ S +Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-----EKKLPVTVDMT 317
D FAADVRL FSN YNPP ++V MA L+ FE+++ + E P V T
Sbjct: 355 DAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDEPAEPSSPNAVSAT 414
Query: 318 AV 319
AV
Sbjct: 415 AV 416
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F TPVD +KLN+PDY VIK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 GECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|148235897|ref|NP_001090595.1| bromodomain containing 3 [Xenopus laevis]
gi|120537384|gb|AAI29055.1| LOC100036838 protein [Xenopus laevis]
Length = 783
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+++L ++S + + W F PVD L + DY +IK+PMDL ++K K+ +Y+
Sbjct: 353 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKNPMDLSSVKRKMDGREYA 412
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D AFAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 413 DAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 453
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KL++PDY +IK+PMD+GTIK ++ S Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDCVKLSLPDYHKIIKNPMDMGTIKKRLESNYYWSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN +D+ +MA L K F
Sbjct: 95 NECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIF 129
>gi|348511137|ref|XP_003443101.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 819
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 153 LLESVGGPSVVLAPK---GKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQC 209
L+ S GGP V+L P +R +GR KK ++P+ S ++ C
Sbjct: 321 LVRSPGGP-VLLQPMMAGTGRRVGSGRPIKPPKKDLPDSVQPQPSRKGKLSPQ---LRYC 376
Query: 210 ENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
LL ++S + + W F TPVD L + DY +IK PMDL TIK K+ +Y D
Sbjct: 377 SGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCREYRDAQQ 436
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
FA+DVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 437 FASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFRF 473
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ L+ L H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 80 KTLMKSLWRHHFAWPFQEPVDAYKLNLPDYHKIIKQPMDMGTIKKRLENNFYRSASECIQ 139
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA +L K F
Sbjct: 140 DFNTMFTNCYIYNKPTDDIVLMAQSLEKIF 169
>gi|355745448|gb|EHH50073.1| hypothetical protein EGM_00839, partial [Macaca fascicularis]
Length = 957
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 284 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 343
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 344 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 387
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 23 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 82
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 83 NPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 137
>gi|134105429|pdb|2OUO|A Chain A, Crystal Structure Of The Bromo Domain 2 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|340707485|pdb|2YEM|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|340707486|pdb|2YEM|B Chain B, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
Length = 130
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 10 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 69
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 70 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 124
>gi|402855232|ref|XP_003892235.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Papio
anubis]
gi|402855234|ref|XP_003892236.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Papio
anubis]
gi|402855236|ref|XP_003892237.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Papio
anubis]
Length = 945
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|425906067|sp|Q4R8Y1.3|BRDT_MACFA RecName: Full=Bromodomain testis-specific protein
Length = 947
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|407043630|gb|EKE42060.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 265
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
P T+ + +E +KP N+ + C +++ +LM VF PVD NIP+
Sbjct: 40 PMTRSMSGYEIE-EKPVIKNEPLNSFEKELCMSVMKQLMKVSESEVFMEPVDPEIWNIPN 98
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
YF +IK PMDLGT+ KI Y F+ DVRLTF+NAMT+NPP N VH A+ L K
Sbjct: 99 YFDIIKTPMDLGTVIKKIKKNMYYSIDEFSNDVRLTFTNAMTFNPPGNYVHSYAEKLYKI 158
Query: 299 FEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPV 355
FE ++ ++L + A+++++++ + P+ + ++ K+K P+
Sbjct: 159 FENYYRHCIRELNHHL------KEANNLLQSKKKYSQKPLNRSEIHYLTQKMKNIPL 209
>gi|322801602|gb|EFZ22243.1| hypothetical protein SINV_03245 [Solenopsis invicta]
Length = 877
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++L L + + + W F PVD L + DY +IK PMDLGT+K K+ + QY
Sbjct: 393 LKSCNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKTKMDNRQYK 452
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA+DVRL F+N YNPP +DV MA L+ FE+R+ +
Sbjct: 453 TAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKV 496
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 49/90 (54%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ +L + HQF W F PVD KLN+PDY +IK PMDLGTIK ++ + Y
Sbjct: 58 KGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQ 117
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA L K F
Sbjct: 118 DFNTMFTNCYVYNKPGEDVVVMAQALEKLF 147
>gi|384499194|gb|EIE89685.1| hypothetical protein RO3G_14396 [Rhizopus delemar RA 99-880]
Length = 446
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 164 LAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQF-- 221
+ PK K +AP + P+ K+ P+K N +K C L L ++
Sbjct: 148 IRPKRKAQAPT-KEYPEIKRN------PRK--------NDAQLKFCAQALKELKKSKYRD 192
Query: 222 -GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+ F PVDV+ LNIPDY +IKHPMDL TI+ K+ G+Y +P F D++L F+N
Sbjct: 193 INYPFLHPVDVVALNIPDYVDIIKHPMDLSTIEKKLNDGEYVEPKDFEEDIKLMFNNCYL 252
Query: 281 YNPPQNDVHIMADTLRKYFEVRW 303
YNPP +H M L K F+ +W
Sbjct: 253 YNPPSLPIHKMGRQLEKVFDEKW 275
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+K C ++ L H+ F PVD ++LNIPDY +I HPMDL T+ K+ SGQYS
Sbjct: 6 IKYCGAIMRNLKKHRDATPFLQPVDYIQLNIPDYPKIIHHPMDLATVDKKLNSGQYSSVD 65
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADD 325
+ DVRL F+N +N P+ + ++ + FE K++ + P T+ PSR+
Sbjct: 66 QWICDVRLVFNNCFKFNGPEATISMLCQNVESAFE---KSLRQMPP---SKTSEPSRS-P 118
Query: 326 MIETETRMGMPPMKKKKVSPKET 348
+E + G KK+K + KET
Sbjct: 119 YVEYDKEEGS-AKKKQKTNSKET 140
>gi|255089248|ref|XP_002506546.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226521818|gb|ACO67804.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 208
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 202 NAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
N L + E ++ L H+F ++F PVD + LNIPDYF V+K PMDLGT+ K+ +G Y
Sbjct: 78 NDDLKGRLEKVINALQRHRFYFIFAQPVDPVALNIPDYFDVVKTPMDLGTVANKVRNGAY 137
Query: 262 -SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D F D RL FSN YNPP +D M D + K F+ +W
Sbjct: 138 KGDVTDFEDDARLVFSNCRAYNPPGSDAATMGDAVEKEFDKKW 180
>gi|194388908|dbj|BAG61471.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 52/83 (62%)
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+ W F PVD L + DY +IKHPMDL T+K K+ +Y D FAADVRL FSN
Sbjct: 9 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYK 68
Query: 281 YNPPQNDVHIMADTLRKYFEVRW 303
YNPP ++V MA L+ FE+R+
Sbjct: 69 YNPPDHEVVAMARKLQDVFEMRF 91
>gi|395759239|pdb|2LSP|B Chain B, Solution Structures Of Brd4 Second Bromodomain With
Nf-Kb-K310ac Peptide
Length = 128
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 8 QHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 67
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 68 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 122
>gi|395730261|ref|XP_002810633.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Pongo abelii]
Length = 1038
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 344 LKHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 403
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 404 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 447
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 84 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 143
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA TL K F
Sbjct: 144 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQTLEKLF 198
>gi|162287117|ref|NP_001104751.1| bromodomain-containing protein 4 [Danio rerio]
gi|159507457|gb|ABW97742.1| bromodomain 4 [Danio rerio]
Length = 1444
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
G S ++ C ++ + + + + W F PVDV L + DY +IKHPMDL TI
Sbjct: 354 GTPSPKQQEQLRYCSGIVKDMFAKKHAAYAWPFYKPVDVDTLGLHDYHDIIKHPMDLSTI 413
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
K K+ + QY + FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 414 KDKLETRQYREAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 464
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F+ PVD +KLN+PDY+ +IK+PMD+GTIK ++ S Y+ D
Sbjct: 55 VLKSLWKHQFAWPFHAPVDAVKLNLPDYYKIIKNPMDMGTIKKRLESAFYTSAQECIQDF 114
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 115 NTMFTNCYIYNKPGDDIVLMAEALEKVF 142
>gi|224007327|ref|XP_002292623.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
gi|220971485|gb|EED89819.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
Length = 865
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 68/107 (63%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
++ ++C L+ +L +H+ GWVF PVD ++L IPDYF +++HPMDL ++ K+ +G Y D
Sbjct: 49 LITRKCLPLVRKLYNHEHGWVFKDPVDPVELGIPDYFDIVQHPMDLALVETKLENGVYKD 108
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
+F D +L F NA+ +N +NDV MA L F+ KA+ K +
Sbjct: 109 LDSFERDTKLVFENAILFNGEKNDVGGMAKQLLFMFDEDLKAVMKGM 155
>gi|431897072|gb|ELK06336.1| Bromodomain testis-specific protein, partial [Pteropus alecto]
Length = 931
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 280 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQEYK 339
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 340 DAYEFAADVRLMFVNCYKYNPPDHEVVAMARMLQDVFEMHFAKI 383
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD MKL +PDY+T+IK
Sbjct: 18 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAMKLKLPDYYTIIK 77
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
PMDL TIK ++ Y D + FSN YN +D+ +MA L K F
Sbjct: 78 KPMDLSTIKKRLEHKYYVQASECIEDFNMMFSNCYLYNKTGDDIVLMAQALEKLF 132
>gi|297279234|ref|XP_001100884.2| PREDICTED: bromodomain testis-specific protein-like [Macaca
mulatta]
Length = 983
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 309 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 368
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 369 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 412
>gi|195480258|ref|XP_002101200.1| GE17489 [Drosophila yakuba]
gi|194188724|gb|EDX02308.1| GE17489 [Drosophila yakuba]
Length = 2036
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 480 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 539
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 540 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 583
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D F+N YN P DV +MA TL K F + +++ K
Sbjct: 99 KETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPK 142
>gi|356532581|ref|XP_003534850.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 578
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 198 ASSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
A+SSN M +M Q + ++ H++ W F PVDV L + DY+ +I+ PMD GTIK K
Sbjct: 310 ANSSNTMKEVMHQFSTIFHQITQHRWAWPFMDPVDVEGLGLSDYYQIIEKPMDFGTIKRK 369
Query: 256 ITS---GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ + Y + +DV L F NAM YN + D+HIMA TLR+ FE +W
Sbjct: 370 MDAKDGSGYKNVRQIYSDVTLVFKNAMKYNDEKTDIHIMAKTLREKFEKKW 420
>gi|397473963|ref|XP_003808463.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
paniscus]
gi|397473965|ref|XP_003808464.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
paniscus]
gi|397473967|ref|XP_003808465.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Pan
paniscus]
Length = 947
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|343962325|dbj|BAK62750.1| bromodomain testis-specific protein [Pan troglodytes]
Length = 947
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|332809502|ref|XP_524767.3| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
troglodytes]
gi|332809504|ref|XP_003308258.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
troglodytes]
gi|410033223|ref|XP_003949508.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 870
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|194897170|ref|XP_001978604.1| GG17589 [Drosophila erecta]
gi|190650253|gb|EDV47531.1| GG17589 [Drosophila erecta]
Length = 2024
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 478 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 537
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 538 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 581
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D F+N YN P DV +MA TL K F + +++ K
Sbjct: 99 KETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPK 142
>gi|349580096|dbj|GAA25257.1| K7_Bdf1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 686
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFGRDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|148676421|gb|EDL08368.1| bromodomain containing 3, isoform CRA_c [Mus musculus]
Length = 516
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ S +Y
Sbjct: 316 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 375
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 376 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 416
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 43 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 102
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 103 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 137
>gi|443691011|gb|ELT92995.1| hypothetical protein CAPTEDRAFT_169335 [Capitella teleta]
Length = 1173
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C ++ L + + + W F PVD L + DY +IK PMDLG+I+ K+ + +Y
Sbjct: 325 MKYCSGVIKELFAKKHAGYAWPFYKPVDADLLGLHDYHEMIKRPMDLGSIRQKLETREYE 384
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
P FA +VRL F+N YNPP++DV +MA L+ FE+R+
Sbjct: 385 SPAEFAEEVRLIFTNCYRYNPPESDVVMMAKKLQDVFEMRY 425
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F+TPVD +KLN+ DY+ +IKHPMD+GTIK ++ + Y D
Sbjct: 54 VLKALWKHQFSWPFHTPVDAVKLNLHDYYKIIKHPMDMGTIKKRLENQYYHRAQECIQDW 113
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
F+N TYN D+ +M + K F ++
Sbjct: 114 NQMFTNCYTYNKAGEDITVMCQAVEKQFVLK 144
>gi|159491100|ref|XP_001703511.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158280435|gb|EDP06193.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 429
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 20/199 (10%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
++ K C L +M H++ + FNTPVD + DY V+ PMD T++ + +G Y D
Sbjct: 88 IVQKHCSQALKAIMQHKWAFPFNTPVDTSRFV--DYLKVVATPMDFSTVRNRTEAGYYRD 145
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRA 323
P + +DV L FSNA YN P +D H+MA TL++ E +++ + P + AV R
Sbjct: 146 PKDWWSDVMLVFSNAKRYNAPGSDCHLMAQTLQEVSEEKYEKLIA--PRLAEEAAVTQRE 203
Query: 324 D----------------DMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRIL 367
+ D ++ + M M + + +E K A + +T EEK+ L
Sbjct: 204 ELHLRKRRAELANGQVADAMDAQCGMLFGLMAELHAAIREAKSMAASLCEPLTLEEKQAL 263
Query: 368 STELEALLEELPESIIDFL 386
+ ++ L ESI+ F+
Sbjct: 264 AATIQGLPTAQLESIVAFV 282
>gi|161611729|gb|AAI55902.1| Brd2-a protein [Xenopus laevis]
Length = 517
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVDV L + DY+ +IKHPMD+ TIK K+ S ++
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 383
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAA +RL FSN YNPP +DV MA L+ FE +
Sbjct: 384 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 424
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
PQT + PKKP G +++ L K ++ L HQF W F PVD +KL +PD
Sbjct: 37 PQTNPPAPEFINPKKP-GRSTNQLQYLHKA---VVKSLWKHQFSWPFRQPVDAVKLGLPD 92
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y +IK PMD+GT+K ++ + Y L D F+N YN P +D+ +MA +L K
Sbjct: 93 YHKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKM 152
Query: 299 F 299
F
Sbjct: 153 F 153
>gi|442615454|ref|NP_001259321.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
gi|440216522|gb|AGB95166.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
Length = 2046
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 481 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 540
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 541 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D F+N YN P DV +MA TL K F + +++ K
Sbjct: 99 KETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPK 142
>gi|403284014|ref|XP_003933383.1| PREDICTED: bromodomain testis-specific protein [Saimiri boliviensis
boliviensis]
Length = 1132
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 458 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 517
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 518 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFATI 561
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H W F PVD +KL +PDY+T+IK
Sbjct: 194 VNPPPPEYINTKKNGRLTNQLQYLQKVILKDLWKHDLSWPFQRPVDAVKLKLPDYYTIIK 253
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L + F
Sbjct: 254 NPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEELF 308
>gi|120577456|gb|AAI30180.1| Brd2-a protein [Xenopus laevis]
Length = 518
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVDV L + DY+ +IKHPMD+ TIK K+ S ++
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 383
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAA +RL FSN YNPP +DV MA L+ FE +
Sbjct: 384 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 424
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
PQT + PKKP G +++ L K ++ L HQF W F PVD +KL +PD
Sbjct: 37 PQTNPPAPEFINPKKP-GRSTNQLQYLHKA---VVKSLWKHQFSWPFRQPVDAVKLGLPD 92
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y +IK PMD+GT+K ++ + Y L D F+N YN P +D+ +MA +L K
Sbjct: 93 YHKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKM 152
Query: 299 F 299
F
Sbjct: 153 F 153
>gi|76780317|gb|AAI06310.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 517
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVDV L + DY+ +IKHPMD+ TIK K+ S ++
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 383
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAA +RL FSN YNPP +DV MA L+ FE +
Sbjct: 384 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 424
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
PQT + PKKP G +++ L K ++ L HQF W F PVD +KL +PD
Sbjct: 37 PQTNPPAPEFINPKKP-GRSTNQLQYLHKA---VVKSLWKHQFSWPFRQPVDAVKLGLPD 92
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y +IK PMD+GT+K ++ + Y L D F+N YN P +D+ +MA +L K
Sbjct: 93 YHKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKM 152
Query: 299 F 299
F
Sbjct: 153 F 153
>gi|54311476|gb|AAH84758.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 525
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVDV L + DY+ +IKHPMD+ TIK K+ S ++
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 383
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAA +RL FSN YNPP +DV MA L+ FE +
Sbjct: 384 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 424
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
PQT + PKKP G +++ L K ++ L HQF W F PVD +KL +PD
Sbjct: 37 PQTNPPAPEFINPKKP-GRSTNQLQYLHKA---VVKSLWKHQFSWPFRQPVDAVKLGLPD 92
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y +IK PMD+GT+K ++ + Y L D F+N YN P +D+ +MA +L K
Sbjct: 93 YHKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKM 152
Query: 299 F 299
F
Sbjct: 153 F 153
>gi|157453|gb|AAA28540.1| 7.6 kb fsh membrane protein [Drosophila melanogaster]
Length = 2038
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 481 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 540
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 541 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+ ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 43 IKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETI 102
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D F+N YN P DV +MA TL K F + +++ K
Sbjct: 103 QDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPK 142
>gi|440906896|gb|ELR57110.1| Bromodomain testis-specific protein [Bos grunniens mutus]
Length = 964
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L ++ + + W F PVDV L + +Y+ ++K PMDLGTIK K+ + +Y
Sbjct: 272 LRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 11 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIK 70
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ Y D FSN YN P +D+ +MA L K F
Sbjct: 71 NPMDLNTIKKRLEHKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 125
>gi|390466206|ref|XP_003733541.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Callithrix jacchus]
Length = 932
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 272 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFAMI 375
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVILKDLWKHDFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L + F
Sbjct: 72 NPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEELF 126
>gi|24640482|ref|NP_511078.2| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
gi|68067442|sp|P13709.2|FSH_DROME RecName: Full=Homeotic protein female sterile; AltName:
Full=Fragile-chorion membrane protein
gi|22831925|gb|AAF46312.3| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
Length = 2038
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 481 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 540
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 541 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+ ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 43 IKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETI 102
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D F+N YN P DV +MA TL K F + +++ K
Sbjct: 103 QDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPK 142
>gi|213405871|ref|XP_002173707.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001754|gb|EEB07414.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 596
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
M+ C ++ L Q F + F PVD + + PDYF +IKHPMDL T++ K+ +G+Y
Sbjct: 228 MRFCSTIIKELHKRQYSTFAYPFYQPVDPVACDCPDYFDIIKHPMDLSTVQKKLNNGEYE 287
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
P F AD+RL F+N TYNP VH M L F+ +W
Sbjct: 288 TPSDFEADIRLIFNNCYTYNPVGTPVHEMGRKLEAVFDEKW 328
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K C ++ +L + F PVD +K NIPDY T+IKHPMDLGTI+ ++T Y+
Sbjct: 67 KYCLAIVRQLKRTKDSIPFRAPVDPVKQNIPDYPTIIKHPMDLGTIEKRLTGHIYNSAQE 126
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK---LPVTVDMTAVPSRA 323
F D+RL FSN TYN + V +M + FE + K + LP T S A
Sbjct: 127 FIDDMRLMFSNCFTYNGTTSPVGVMGKNIETIFERQLKQLPSSNADLPPTKKTKRRGSTA 186
Query: 324 DDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVM-TNEEKRILSTELE---ALLEEL 378
ETR +K+ + A PV V T ++R LS+++ +++EL
Sbjct: 187 SSTSTAETR-------SRKLHSPAVSVPAPPVAVVNDTKSQRRKLSSQMRFCSTIIKEL 238
>gi|198469092|ref|XP_002134216.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
gi|198146712|gb|EDY72843.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
Length = 1981
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 487 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 546
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 547 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 590
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+ ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 43 IKTVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETI 102
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA TL K F
Sbjct: 103 HDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|27696271|gb|AAH43784.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 539
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVDV L + DY+ +IKHPMD+ TIK K+ S ++
Sbjct: 344 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 403
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAA +RL FSN YNPP +DV MA L+ FE +
Sbjct: 404 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 444
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
PQT + PKKP G +++ L K ++ L HQF W F PVD +KL +PD
Sbjct: 57 PQTNPPAPEFINPKKP-GRSTNQLQYLHKA---VVKSLWKHQFSWPFRQPVDAVKLGLPD 112
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y +IK PMD+GT+K ++ + Y L D F+N YN P +D+ +MA +L K
Sbjct: 113 YHKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKM 172
Query: 299 F 299
F
Sbjct: 173 F 173
>gi|302794995|ref|XP_002979261.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
gi|300153029|gb|EFJ19669.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
Length = 700
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 115/257 (44%), Gaps = 44/257 (17%)
Query: 211 NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS---GQYSDPLAF 267
N+L ++ H++ W F PVDV L + DY+ VIK PMD TI+ K+ + Y
Sbjct: 181 NILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEAKDGSGYRSVQEI 240
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK-AIEKKLPVTVDMTAVPSRADDM 326
A DVRL FSNAMTYN DV++MA TL + FE ++K +E KL + R +M
Sbjct: 241 AEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKL-----LEEGAKRKQEM 295
Query: 327 IETET---------------RMGMPPMKKKKV---SPKETKIKAEP-------------- 354
+E E RM KK +E KI A
Sbjct: 296 VELEVHEGEEAKAAEEVALDRMAHEICKKLNNLEDELEEIKINATSKYRQMLDGFSSYSY 355
Query: 355 --VRRVMTNEEKRILSTELEALLEELPESIIDFL-KEHSAGETGEDELEIDIDALSDDTL 411
V R M+ EEKR L L L +I + K + + E+E+DIDAL TL
Sbjct: 356 LRVCRPMSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVAEVEVDIDALDTGTL 415
Query: 412 FALRKLLDDYLLEKQQK 428
+ L + L + +Q+
Sbjct: 416 WQLHCYVQMVLSQNKQQ 432
>gi|195457098|ref|XP_002075425.1| GK15212 [Drosophila willistoni]
gi|194171510|gb|EDW86411.1| GK15212 [Drosophila willistoni]
Length = 2114
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 527 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 586
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 587 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 630
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 80 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSA 139
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D F+N YN P DV +MA TL K F + +++ K
Sbjct: 140 KEAILDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPK 183
>gi|148725668|emb|CAN87976.1| novel protein (zgc:77289) [Danio rerio]
Length = 664
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L ++S + + W F PVD L + DY +IK PMDL T+K K+ S +Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-----EKKLPVTVDMT 317
D FAADVRL FSN YNPP ++V MA L+ FE+++ + E P V T
Sbjct: 355 DAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDEPAEPSSPNAVSAT 414
Query: 318 AV 319
AV
Sbjct: 415 AV 416
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F TPVD +KLN+PDY VIK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 GECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|21594670|gb|AAH32124.1| BRD3 protein [Homo sapiens]
gi|119608520|gb|EAW88114.1| bromodomain containing 3, isoform CRA_b [Homo sapiens]
Length = 556
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|355673426|gb|AER95168.1| bromodomain containing 4 [Mustela putorius furo]
Length = 551
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P SS + +K C +L + + + + W F PVDV L + DY +IKHPMD
Sbjct: 350 QHPVPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMD 409
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 410 MSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 469
Query: 307 EKKLPVT-VDMTAVP 320
E + PV V AVP
Sbjct: 470 EPEEPVVAVSSPAVP 484
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 80 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 139
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 140 NTMFTNCYIYNKPGDDIVLMAEALEKLF 167
>gi|195355783|ref|XP_002044367.1| GM11218 [Drosophila sechellia]
gi|194130685|gb|EDW52728.1| GM11218 [Drosophila sechellia]
Length = 1272
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 483 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 542
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 543 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 586
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA TL K F
Sbjct: 99 KETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|326936210|ref|XP_003214150.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Meleagris gallopavo]
Length = 697
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 199 SSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
SS + +K C ++ + + + + W F PVDV L + DY +IKHPMDL TIK K
Sbjct: 270 SSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSK 329
Query: 256 ITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ + +Y D FAADVRL FSN YNP ++V MA L+ FE+R+
Sbjct: 330 LENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRF 377
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
>gi|442615456|ref|NP_001259322.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
gi|440216523|gb|AGB95167.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
Length = 1105
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 476 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 535
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 536 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 579
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
PA + L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK
Sbjct: 28 PAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIK 87
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
++ + Y D F+N YN P DV +MA TL K F
Sbjct: 88 KRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|63054449|ref|NP_588301.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe
972h-]
gi|46397302|sp|Q9Y7N0.1|BDF1_SCHPO RecName: Full=SWR1 complex bromodomain subunit bdf1
gi|157310522|emb|CAB41059.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe]
Length = 578
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 202 NAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS 258
N M+ C +L L Q F + F PVD + + PDYF VIK PMDL TI+ K+
Sbjct: 253 NNSQMRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNK 312
Query: 259 GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA 305
+YS F +D+ L F+N TYNPP VH+M L F+ +W+A
Sbjct: 313 NEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKWEA 359
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K C ++ +L + F PVD +K NIPDY T++K+PMDLGTI+ K+TS +YS P
Sbjct: 91 KYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQE 150
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
F D+ L FSN YN ++ V M L++ FE + K +
Sbjct: 151 FIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQL 190
>gi|296191127|ref|XP_002743521.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 1364
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 953 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 1012
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
D FAADVRL FSN YNPP ++V MA L+ FE+R
Sbjct: 1013 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMR 1052
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 210 ENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 684 QNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECM 743
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 744 QDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 774
>gi|307213342|gb|EFN88794.1| Homeotic protein female sterile [Harpegnathos saltator]
Length = 1514
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 402 LKCCNDILKELFSKKHSGYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKSKMDNREYK 461
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA+DVRL F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 462 TAQEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKI 505
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+ +L + HQF W F PVD KLN+PDY +I+ PMDLGTIK ++ + Y
Sbjct: 67 LKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIERPMDLGTIKKRLENTYYWSGKECI 126
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA L K F
Sbjct: 127 QDFNTMFTNCYVYNKPGEDVVVMAQALEKLF 157
>gi|393911119|gb|EJD76176.1| bromodomain containing protein [Loa loa]
Length = 1163
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ L+ L + + F W F PVDV L + DY+ ++K+PMDLGTI+ K+ + QY+
Sbjct: 360 MKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYA 419
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVD 315
P ADV L N YNP + +H L+KYFE +W + ++ P VD
Sbjct: 420 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWHQMPEE-PAVVD 471
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 174 NGRNGPQTKKGNSGRLEPK--KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDV 231
NG P+ + N G ++P+ P G + L + +L M H+ W F PVD
Sbjct: 83 NGWESPRQEAIN-GVVQPRVIPPPGKPTRHTNQLEFMLKEVLKPAMRHKHAWPFMKPVDA 141
Query: 232 MKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIM 291
++L +PDY VIK PMD+ TI+ ++ + Y D FSN +N ++DV +M
Sbjct: 142 VRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSAKDCMQDFESIFSNCYKFNQNEDDVSLM 201
Query: 292 ADTLRKYFEVRWKAI 306
+ + + K +
Sbjct: 202 CKNVENLYREKMKLL 216
>gi|608567|gb|AAA89115.1| Bdf1p [Saccharomyces cerevisiae]
Length = 685
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 317 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 376
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 377 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 436
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 437 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 496
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 497 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 556
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 557 SMPNISEDDEVELDLDTLDNHTILTL 582
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 172 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 231
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 232 NAGISQMARNIQASFE 247
>gi|380792435|gb|AFE68093.1| bromodomain-containing protein 3, partial [Macaca mulatta]
Length = 508
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
>gi|67967916|dbj|BAE00440.1| unnamed protein product [Macaca fascicularis]
Length = 609
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARRLQDVFETHFSKI 376
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|47086635|ref|NP_997867.1| bromodomain-containing protein 3 [Danio rerio]
gi|41944567|gb|AAH65949.1| Bromodomain containing 3b [Danio rerio]
Length = 664
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L ++S + + W F PVD L + DY +IK PMDL T+K K+ S +Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-----EKKLPVTVDMT 317
D FAAD+RL FSN YNPP ++V MA L+ FE+++ + E P V T
Sbjct: 355 DAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDEPAEPSSPNAVSAT 414
Query: 318 AV 319
AV
Sbjct: 415 AV 416
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F TPVD +KLN+PDY VIK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 GECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|24640484|ref|NP_727228.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45554398|ref|NP_996368.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|45554406|ref|NP_996369.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45554416|ref|NP_996370.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|281360582|ref|NP_001162699.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
gi|157455|gb|AAA28541.1| 5.9 kb fsh membrane protein [Drosophila melanogaster]
gi|22831926|gb|AAN09226.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45446848|gb|AAS65277.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|45446849|gb|AAS65278.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45446850|gb|AAS65279.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|51092171|gb|AAT94499.1| LD26482p [Drosophila melanogaster]
gi|220945958|gb|ACL85522.1| fs(1)h-PA [synthetic construct]
gi|272506027|gb|ACZ95234.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
Length = 1110
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 481 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 540
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 541 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
PA + L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK
Sbjct: 28 PAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIK 87
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
++ + Y D F+N YN P DV +MA TL K F
Sbjct: 88 KRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|6323431|ref|NP_013503.1| Bdf1p [Saccharomyces cerevisiae S288c]
gi|5921175|sp|P35817.3|BDF1_YEAST RecName: Full=Bromodomain-containing factor 1
gi|625115|gb|AAB82357.1| Bdf1p [Saccharomyces cerevisiae]
gi|285813804|tpg|DAA09700.1| TPA: Bdf1p [Saccharomyces cerevisiae S288c]
gi|392297901|gb|EIW09000.1| Bdf1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 686
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|312085274|ref|XP_003144613.1| hypothetical protein LOAG_09036 [Loa loa]
Length = 1022
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ L+ L + + F W F PVDV L + DY+ ++K+PMDLGTI+ K+ + QY+
Sbjct: 219 MKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYA 278
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVD 315
P ADV L N YNP + +H L+KYFE +W + ++ P VD
Sbjct: 279 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWHQMPEE-PAVVD 330
>gi|384486789|gb|EIE78969.1| hypothetical protein RO3G_03674 [Rhizopus delemar RA 99-880]
Length = 489
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 199 SSSNAMLMKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
+++++ +MK C + L ++ + F PVD + LNIPDY T++KHPMDL TI+ K
Sbjct: 182 TTASSKVMKYCLQTVKELKKQKYKHLSFPFLYPVDPVALNIPDYPTIVKHPMDLSTIETK 241
Query: 256 ITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ +Y P AFAAD++L F N YNPP ++ +A L+ F+ +W
Sbjct: 242 LNRNEYDSPDAFAADIKLMFDNCYLYNPPHLPIYDLAKQLQAIFDEKW 289
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
MK C ++ L H+ F PVD +KLN+PDY VIK P+DL I K+ +Y
Sbjct: 38 MKYCAAIMRNLKKHRDAAPFLNPVDYIKLNVPDYPQVIKRPIDLTLIDQKLNQNEYVTVD 97
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
F ADVRL F+N YN P+ + ++ + FE
Sbjct: 98 DFVADVRLVFNNCFKYNGPEAMISVLCQNVESAFE 132
>gi|190405441|gb|EDV08708.1| protein BDF1 [Saccharomyces cerevisiae RM11-1a]
Length = 686
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|151940920|gb|EDN59302.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
gi|323303730|gb|EGA57516.1| Bdf1p [Saccharomyces cerevisiae FostersB]
gi|323307897|gb|EGA61157.1| Bdf1p [Saccharomyces cerevisiae FostersO]
Length = 686
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|449017171|dbj|BAM80573.1| similar to bromodomain containing transcription factor
[Cyanidioschyzon merolae strain 10D]
Length = 821
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLN---IPDYFTVIKHPMDLGTIKCKITSGQY- 261
M+ C +L +M + F PVD + N IPDYF +IK PMDLGT++ K+ SG+Y
Sbjct: 336 MRFCARVLKEIMKMKEARAFLLPVDKL-WNPDAIPDYFEIIKQPMDLGTVRQKLESGEYG 394
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
+DP AF DVRL +SNAMTYNPP ++ + +A L + FE
Sbjct: 395 TDPEAFRRDVRLVWSNAMTYNPPDSEYYNIAKMLNEAFE 433
>gi|442615458|ref|NP_001259323.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
gi|440216524|gb|AGB95168.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
Length = 1115
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 486 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 545
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 546 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 589
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
PA + L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK
Sbjct: 28 PAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIK 87
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
++ + Y D F+N YN P DV +MA TL K F
Sbjct: 88 KRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|207342738|gb|EDZ70407.1| YLR399Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 686
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|365764189|gb|EHN05714.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 686
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIIAERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|323336416|gb|EGA77684.1| Bdf1p [Saccharomyces cerevisiae Vin13]
Length = 686
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|195130189|ref|XP_002009535.1| GI15407 [Drosophila mojavensis]
gi|193907985|gb|EDW06852.1| GI15407 [Drosophila mojavensis]
Length = 2056
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 508 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 567
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 568 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 611
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+ ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 43 IKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKEAI 102
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D F+N YN P DV +MA TL K F + +++ K
Sbjct: 103 HDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPK 142
>gi|80971731|gb|ABB52829.1| BRD2 [Oncorhynchus mykiss]
Length = 812
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 83/155 (53%), Gaps = 12/155 (7%)
Query: 158 GGPSVV---LAPKGK---KRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
GGP ++ +A GK +R +GR KK ++PK P A S ++ C +
Sbjct: 300 GGPVLLQPMIAGGGKTLARRGGSGRPIKPPKKDLPDSVQPKAPRRAKLSQQ---LRYCNS 356
Query: 212 LLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+L L+S + + W F PVD L + DY +IK PMDL IK ++ S +Y D F+
Sbjct: 357 VLKDLLSKKHAAYAWPFYKPVDASALGLHDYHDIIKCPMDLSNIKRRMDSREYRDSQQFS 416
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
ADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 417 ADVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFRF 451
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L H F W F+ PVD +LN+PDY +IK PMD+GTIK ++ + Y D
Sbjct: 60 MIKSLWRHHFAWPFHEPVDAFRLNLPDYHKIIKQPMDMGTIKKRLENNYYRSASECMQDF 119
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 120 NTMFTNCYIYNKPTDDIVLMAQSLEKVF 147
>gi|299116970|emb|CBN75074.1| hypothetical protein Esi_0066_0081 [Ectocarpus siliculosus]
Length = 1147
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 206 MKQCENLLT--RLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
+++C +L R + + W FN PVD + LN+P+Y T+IK PMDLGT+K K+ SG+Y +
Sbjct: 698 LRRCVTVLNNLRAIRGKSEW-FNEPVDYVGLNLPEYTTIIKRPMDLGTVKSKLESGEYKN 756
Query: 264 PLAFAADVRLTFSNAMTYNPPQ-NDVHIMADTLRKYFEVR 302
+ FA +VRL FSNA YN + +DVHI A L F+ +
Sbjct: 757 TVEFAHEVRLVFSNACHYNSDETSDVHIAARHLLHVFDAK 796
>gi|297828908|ref|XP_002882336.1| hypothetical protein ARALYDRAFT_896441 [Arabidopsis lyrata subsp.
lyrata]
gi|297328176|gb|EFH58595.1| hypothetical protein ARALYDRAFT_896441 [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L +C +L L FGW F V + PDYF+ I PMD TIK K+ Y +
Sbjct: 49 LRSRCHKVLKSLKEEWFGWRFENLVT----DNPDYFSAISKPMDFVTIKSKLDKNLYVNT 104
Query: 265 LA-FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTV 314
+ F DVRL F+NA+ Y PP+N +H A L+K FE+RW++++KKL V
Sbjct: 105 VREFPEDVRLVFANAVRYYPPENMLHKNAKRLKKVFEIRWESVKKKLASEV 155
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 11/102 (10%)
Query: 591 VSPDKLYRAALLRNRFADTILKAREKAL--EKGEKRDP-EKLRIEREELERRHREEKARL 647
+SP K RAA +R RF+D I+KAR + L E K D +++ E++ LE R R+ KA +
Sbjct: 181 LSPKKALRAATIRIRFSDAIVKARYRKLIDESSNKADVMMRMKKEKQLLETRERQVKATV 240
Query: 648 QAEAKAA------EE--ARRKAEAEAAAEAKRKRELEREAAR 681
+AE +AA EE AR K E EA + + E E+E +
Sbjct: 241 EAETRAARLKAVREERLAREKLEEEAKSNFEDHLETEKEIVK 282
>gi|224473811|gb|ACN49152.1| bromodomain containing 2 [Oryzias dancena]
Length = 826
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 181 TKKGNSGR-LEPKK--------PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTP 228
+++G SGR ++P K P S + ++ C +L L+S + + W F P
Sbjct: 358 SRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYAWPFYKP 417
Query: 229 VDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDV 288
VD + L + DY +IK PMDL TIK K+ S +Y D F+ADVRL FSN YNPP +DV
Sbjct: 418 VDAVSLGLHDYHEIIKQPMDLSTIKRKMDSREYRDAQQFSADVRLMFSNCYKYNPPDHDV 477
Query: 289 HIMADTLRKYFEV 301
MA L+ FE
Sbjct: 478 VAMARKLQDVFEF 490
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F+ PVD +KL++PDY +IK PMD+GTIK ++ + Y D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 144
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAF 172
>gi|363747028|ref|XP_003643891.1| PREDICTED: bromodomain-containing protein 4-like [Gallus gallus]
Length = 1354
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++ + + + + W F PVDV L + DY +IKHPMDL TIK K+ + +Y
Sbjct: 369 LKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYR 428
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNP ++V MA L+ FE+R+
Sbjct: 429 DAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRF 469
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 88 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 147
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 148 NTMFTNCYIYNKPGDDIVLMAEALEKLF 175
>gi|387014800|gb|AFJ49519.1| bromodomain-containing protein 2-like [Crotalus adamanteus]
Length = 715
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL +IK K+ + +Y
Sbjct: 355 LKYCNGILKELVSKRHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSSIKRKMENREYR 414
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FA+DVRL FSN YNPP +DV MA L+ FE +
Sbjct: 415 DAQEFASDVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 455
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 70 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 125
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ +G Y D F+N YN P +D+ +MA TL K F
Sbjct: 126 TIKRRLENGYYWSSGECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 174
>gi|432098345|gb|ELK28145.1| Bromodomain adjacent to zinc finger domain protein 2B [Myotis
davidii]
Length = 2206
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQYS P FA
Sbjct: 2107 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYSSPEYFA 2164
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2165 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2199
>gi|427785339|gb|JAA58121.1| Putative bromodomain-containing protein 4 [Rhipicephalus
pulchellus]
Length = 1295
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 20/118 (16%)
Query: 206 MKQCENLLTRLMSHQ--------------------FGWVFNTPVDVMKLNIPDYFTVIKH 245
MK C ++L L + + + W F PVD L + DY +IKH
Sbjct: 365 MKYCNSILKELFAKKHAGPSLNARRPRRAQQPRPGYAWPFYKPVDAELLGLHDYHEIIKH 424
Query: 246 PMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
PMDLGT+K K+ + +Y P FA DVRL F+N YNPP ++V MA L+ FE+R+
Sbjct: 425 PMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRY 482
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 208 QCENLLTRLMS----HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
Q ++LL +M HQF W F PVD +KLN+PDY +I+HPMDLGTIK ++ YS
Sbjct: 62 QLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRLEHCYYSS 121
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D + F+N YN P DV +MA L K F
Sbjct: 122 AQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLF 157
>gi|116283260|gb|AAH05281.1| BRDT protein [Homo sapiens]
Length = 465
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ MDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NSMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|62020593|gb|AAH17582.1| BRDT protein, partial [Homo sapiens]
Length = 462
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|195148234|ref|XP_002015079.1| GL19519 [Drosophila persimilis]
gi|194107032|gb|EDW29075.1| GL19519 [Drosophila persimilis]
Length = 486
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 10/124 (8%)
Query: 183 KGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDY 239
K S ++PKK A +K C +L L S + + W F PVD L + DY
Sbjct: 100 KFESRLVKPKKKLSEA-------LKSCNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDY 152
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ +IK PMDLGT+K K+ + Y AFAAD+RL FSN YNP +D+ IM + L+ F
Sbjct: 153 YNIIKTPMDLGTVKQKLDNRVYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAF 212
Query: 300 EVRW 303
E+ +
Sbjct: 213 EMLY 216
>gi|321456065|gb|EFX67182.1| hypothetical protein DAPPUDRAFT_302185 [Daphnia pulex]
Length = 754
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 207 KQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ +Y
Sbjct: 354 KACNEILKELFSKKHSGYAWPFYKPVDAGLLGLHDYHDIIKKPMDLGTVKAKMDGREYRS 413
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FA+DVR+ F+N YNPP +DV MA L+ FE+R+ I
Sbjct: 414 AAEFASDVRMIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 456
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ + H F W F+ PVD KL +PDYF +IK+PMDLGT+K ++ + Y D
Sbjct: 88 VMKAVWKHSFAWPFHQPVDAKKLGLPDYFKIIKYPMDLGTVKKRLENNYYWSAKECIQDF 147
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETET 331
F+N YN P DV +MA TL K F + + K +++ + P +A +
Sbjct: 148 NTMFTNCYVYNKPGEDVVLMAQTLEKLFLTKVAQMPKD---EIEIESTPGKASKFKKAPI 204
Query: 332 RMGMPPMKKKKVSPKETKIKA 352
R G PP K + P +I A
Sbjct: 205 R-GRPPGSTKIILPGLNQIAA 224
>gi|145353027|ref|XP_001420833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581068|gb|ABO99126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 904
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP- 264
+ + +++ LM H+ ++F PVD + IPDYF VIK+PMDLGTIK +I +G Y +
Sbjct: 414 LTRIKSIHRSLMVHKNAYIFLRPVDPVYWEIPDYFEVIKNPMDLGTIKERIDAGYYDEKN 473
Query: 265 -LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
A+AADVRL +SNAMTYN V MA + + FE +W+
Sbjct: 474 VEAYAADVRLVWSNAMTYNKDDTPVFKMARIMSREFEYQWQ 514
>gi|219118718|ref|XP_002180126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408383|gb|EEC48317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1056
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%)
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
A L +C ++L LM+HQ GWVFN PVD ++L + DYF +IK PMDLGTI+ ++ S Y
Sbjct: 173 AKLKSKCLDVLKGLMAHQHGWVFNGPVDPVELGLVDYFEIIKKPMDLGTIQKRLESSAYH 232
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
F D+ LTF NAM YN + V+ MA L+
Sbjct: 233 SIDDFKTDIFLTFENAMVYNEDGSVVYDMAKQLK 266
>gi|259148377|emb|CAY81624.1| Bdf1p [Saccharomyces cerevisiae EC1118]
Length = 686
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI+ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIIKERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|28839607|gb|AAH47900.1| BRDT protein, partial [Homo sapiens]
Length = 463
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TIK ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|198474627|ref|XP_002132733.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
gi|198138474|gb|EDY70135.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
Length = 485
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 31/177 (17%)
Query: 130 LSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRL 189
LS+ ++L D + ++ ++ P GPS +L PK K S +
Sbjct: 68 LSAMLMLQLEDDFSTMHNVKQEP------GPSALL-PKVK--------------FESRLV 106
Query: 190 EPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHP 246
+PKK A +K C +L L S + + W F PVD L + DY+ +IK P
Sbjct: 107 KPKKKLSEA-------LKSCNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDYYNIIKTP 159
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
MDLGT+K K+ + Y AFAAD+RL FSN YNP +D+ IM + L+ FE+ +
Sbjct: 160 MDLGTVKQKLDNRVYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLY 216
>gi|38541875|gb|AAH62700.1| BRDT protein, partial [Homo sapiens]
Length = 464
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F PVDV L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE + I
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 12 VNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIK 71
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+PMDL TI ++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 72 NPMDLNTIIKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
>gi|417414064|gb|JAA53334.1| Putative chromatin remodeling complex wstf-iswi large subunit,
partial [Desmodus rotundus]
Length = 2092
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY +P +FA
Sbjct: 1993 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYLNPESFA 2050
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2051 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2085
>gi|417406856|gb|JAA50069.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2011
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY +P +FA
Sbjct: 1912 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYLNPESFA 1969
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 1970 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2004
>gi|417406914|gb|JAA50097.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2143
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY +P +FA
Sbjct: 2044 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYLNPESFA 2101
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2102 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2136
>gi|417406880|gb|JAA50080.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2045
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY +P +FA
Sbjct: 1946 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYLNPESFA 2003
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2004 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2038
>gi|67481051|ref|XP_655875.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56473058|gb|EAL50506.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449705918|gb|EMD45867.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 265
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 179 PQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPD 238
P T+ + +E +KP N+ + C +++ +LM VF PVD NIP+
Sbjct: 40 PMTRSMSGYEIE-EKPVIKNEPLNSFEKELCMSVMKQLMKVSESEVFMEPVDPEIWNIPN 98
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
YF +IK PMDLGT+ KI Y F+ DVRLTF+NAMT+NPP N VH A+ L K
Sbjct: 99 YFDIIKTPMDLGTVIKKIKKNMYYSIDEFSNDVRLTFTNAMTFNPPGNYVHSYAEKLYKI 158
Query: 299 FEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPV 355
FE ++ ++L + +++++++ + P+ + ++ K+K P+
Sbjct: 159 FENYYRHCIRELNHHL------KEENNILQSKKKYSQKPLNRSEIHYLTQKMKNIPL 209
>gi|417406918|gb|JAA50099.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2172
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY +P +FA
Sbjct: 2073 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYLNPESFA 2130
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2131 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2165
>gi|354480438|ref|XP_003502414.1| PREDICTED: bromodomain testis-specific protein-like [Cricetulus
griseus]
Length = 839
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L +++ + + W F PVD L + +Y+ ++K+PMDLGTIK K+ + +Y
Sbjct: 272 LKYCSEILKEMLAKKHLSYAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 331
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVSMARMLQDVFEMHFAKI 375
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
+ P P + N L Q + L L L H F W F PVD +KL +PDY+T+IK
Sbjct: 11 VNPPPPEYINAKKNGRLTNQLQFLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIK 70
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
PMDL TIK ++ + Y D FSN YN P +D+ +MA L K F
Sbjct: 71 TPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 125
>gi|157834826|pdb|2DVV|A Chain A, Crystal Structure Of The Second Bromodomain Of The Human
Brd2 Protein
gi|162329881|pdb|2E3K|A Chain A, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329882|pdb|2E3K|B Chain B, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329883|pdb|2E3K|C Chain C, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329884|pdb|2E3K|D Chain D, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
Length = 112
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 7 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 66
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 67 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 107
>gi|391337779|ref|XP_003743242.1| PREDICTED: bromodomain testis-specific protein-like [Metaseiulus
occidentalis]
Length = 802
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P +P + L ++++ + H F W F PVD +KLN+PDYF +IK PMDLG
Sbjct: 58 PTEPGTRPHRNTNQLQFMLKHVMKAVWKHNFAWPFQQPVDTIKLNLPDYFKIIKVPMDLG 117
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D D + FSN YN P DV +MA +L K F
Sbjct: 118 TIKKRLENCYYYDAQECINDFNVLFSNCYIYNKPGEDVVLMAQSLEKLF 166
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +++ L + + + W F T VDV L + DY+ +I PMDLGTIK K+ +Y
Sbjct: 396 LKYCNSIIKELFAKKHSAYAWPFYTAVDVEGLGLHDYYDIITQPMDLGTIKTKMERREYR 455
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
+P F DVRL F N YNP ++V MA L+ FE++
Sbjct: 456 NPDDFCNDVRLVFMNCYKYNPADHEVVKMARKLQDVFEMK 495
>gi|195565677|ref|XP_002106425.1| GD16134 [Drosophila simulans]
gi|194203801|gb|EDX17377.1| GD16134 [Drosophila simulans]
Length = 1038
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 457 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 516
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 517 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 560
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
PA + L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK
Sbjct: 28 PAERPGRNTNQLQYLIQTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIK 87
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
++ + Y D F+N YN P DV +MA TL K F
Sbjct: 88 KRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|170582857|ref|XP_001896320.1| Bromodomain containing protein [Brugia malayi]
gi|158596511|gb|EDP34844.1| Bromodomain containing protein [Brugia malayi]
Length = 1009
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ L+ L + + F W F PVDV L + DY+ ++K+PMDLGTI+ K+ + QY+
Sbjct: 218 MKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYA 277
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
P ADV L N YNP + +H L+KYFE +W+ +
Sbjct: 278 TPEELRADVILICENCYKYNPTSDPIHQHGRALQKYFEDKWRQM 321
>gi|268564300|ref|XP_002639068.1| C. briggsae CBR-TAG-332 protein [Caenorhabditis briggsae]
Length = 747
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 205 LMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
+MK C LL + +F WVF PVD + + DY +IKHPMD+ TIK K+ +GQY
Sbjct: 252 IMKPCIKLLAEFYNKKYQEFAWVFYEPVDAATMGLHDYHNIIKHPMDMKTIKKKLEAGQY 311
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+P F +D+RL +N +TYNP + V+ ++ F +W
Sbjct: 312 KEPAEFESDIRLMINNCLTYNPVGDPVNSFGLRFQEVFNKKW 353
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L H+ W F PVD L IP Y I PMDL TI+ ++ S Y+ D+
Sbjct: 51 VLKEAAKHKHVWPFQKPVDAHTLCIPLYHERITRPMDLKTIESRLKSVYYTSAQECIDDI 110
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
F N +N ++DV IMA + EV K++E+
Sbjct: 111 EQVFQNCYMFNGKEDDVTIMAQNVH---EVIKKSLEQ 144
>gi|33417197|gb|AAH55508.1| Brd2b protein [Danio rerio]
gi|159155579|gb|AAI54432.1| Brd2b protein [Danio rerio]
Length = 558
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + W F PVD L + DY +IKHPMDL TIK K+ +Y
Sbjct: 340 LRYCSGVLKELLSKKHVAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTIKRKMDEREYR 399
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVP 320
+ F+ADVRL FSN YNPP +DV MA L+ FE R+ + ++ D++ +P
Sbjct: 400 EAQQFSADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEFRFAKMPDEVSDEEDLSPMP 457
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
L+ L H F W F+ PVD +LN+PDY +IK PMD+GTIK ++ + Y D
Sbjct: 60 LVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYRGASECLQDF 119
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 120 NTMFTNCYIYNKPTDDIVLMAQSLEKVF 147
>gi|417406892|gb|JAA50086.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2074
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY +P +FA
Sbjct: 1975 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYLNPESFA 2032
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2033 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2067
>gi|327290160|ref|XP_003229792.1| PREDICTED: bromodomain-containing protein 2-like [Anolis
carolinensis]
Length = 794
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IK+PMDL TIK K+ + Y
Sbjct: 356 LKYCNGILKELVSKKHAAYAWPFYKPVDASALGLHDYHEIIKYPMDLSTIKRKMENRDYR 415
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FA+DVRL FSN YNPP +DV MA L+ FE +
Sbjct: 416 DAQEFASDVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSY 456
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 156 SVGGPSVVLAPKGKK-RAPN----GRNGPQTKKGNSGRL-----EPKKPAGAASSSNAML 205
S+ G +V AP GK+ R P+ G GP ++ L P P A +
Sbjct: 13 SLVGLAVESAPPGKRIRKPSLLYEGFEGPPNMAASAPSLPLSPANPTPPEVANPKKPGRV 72
Query: 206 MKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
Q + L + L HQF W F PVD +KL +PDY +IK PMD+GTIK ++ + Y
Sbjct: 73 TNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYY 132
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 133 WSSAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 170
>gi|292614925|ref|XP_002662470.1| PREDICTED: bromodomain-containing protein 2 [Danio rerio]
Length = 979
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + S + + W F PVD L + DY +I PMD+ TIK K+ + +Y+
Sbjct: 273 LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYT 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D L FAAD+RL FSN YNPP ++V MA L+ FE R+ I
Sbjct: 333 DALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 181 TKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDY 239
T GN E K P +N + + E ++ R L H F W F PVD ++LN+PDY
Sbjct: 11 TMNGNPPPPEFKNPKKPGRLTNHL--QYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDY 68
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+T+IK+PMDL TI+ ++ + Y + D F+N YN P +D+ +MA L K F
Sbjct: 69 YTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLF 128
>gi|417406900|gb|JAA50090.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2108
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY +P +FA
Sbjct: 2009 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYLNPESFA 2066
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2067 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2101
>gi|417406931|gb|JAA50104.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2206
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY +P +FA
Sbjct: 2107 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYLNPESFA 2164
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2165 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2199
>gi|427780035|gb|JAA55469.1| Putative bromodomain-containing protein 2 [Rhipicephalus
pulchellus]
Length = 873
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 208 QCENLLTRLMS----HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
Q ++LL +M HQF W F PVD +KLN+PDY +I+HPMDLGTIK ++ YS
Sbjct: 62 QLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRLEHCYYSS 121
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D + F+N YN P DV +MA L K F
Sbjct: 122 AQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLF 157
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%)
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+ W F PVD L + DY +IKHPMDLGT+K K+ + +Y P FA DVRL F+N
Sbjct: 419 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYK 478
Query: 281 YNPPQNDVHIMADTLRKYFEVRW 303
YNPP ++V MA L+ FE+R+
Sbjct: 479 YNPPDHEVVAMARKLQDVFEMRY 501
>gi|323347321|gb|EGA81594.1| Bdf1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 635
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI+ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIIXERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|384501114|gb|EIE91605.1| hypothetical protein RO3G_16316 [Rhizopus delemar RA 99-880]
Length = 227
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 25/222 (11%)
Query: 206 MKQCENLLTRLMSH-QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
M+ C +L L + + F PVD + LNIPDY +++KHP+DL TI+ K+ Y P
Sbjct: 1 MRSCFQILNHLKAQKHLSFPFLYPVDPVALNIPDYPSIVKHPIDLSTIETKLNQNAYDSP 60
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRAD 324
AFAAD++L F+N YN P+ ++ +A L F+ +W+ I+ K P +V PS+
Sbjct: 61 HAFAADIKLMFNNCYLYNAPELPIYDVAKELEAIFDRQWE-IKAKQPASVPRQIKPSKR- 118
Query: 325 DMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIID 384
P +++K S K+ K ++ ++ EEK+ LS + L + +I
Sbjct: 119 -----------PAVERKMKSRKKKKRES------LSYEEKKELSERINRLTGDRLNEVIQ 161
Query: 385 FLKEHSAG-ETGEDELEIDIDALSDDTLFALRKLLDDYLLEK 425
++ + GE E+ +DIDAL +TL K L+D++ K
Sbjct: 162 IIQSSLPDLDKGETEIVLDIDALDINTL----KRLNDFVHNK 199
>gi|308810150|ref|XP_003082384.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
gi|116060852|emb|CAL57330.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
Length = 1083
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
Query: 167 KGKKRAPNGRNGPQTKK---GNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGW 223
+GKK PNG + + ++ ++EP++ + A +A + +++ +M+++ +
Sbjct: 540 RGKK--PNGSGAVSSDENGDADNEQVEPRQTS-ARRGRSATPQSRMQSIHRIIMTNKNAY 596
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD-PLAFAADVRLTFSNAMTYN 282
+F PVD + IPDYF VIK+PMDLGTI K+ +Y + P A+AADVRL +SNAMTYN
Sbjct: 597 MFLKPVDPVYWEIPDYFDVIKNPMDLGTIMTKLEKREYENQPSAYAADVRLVWSNAMTYN 656
Query: 283 PPQNDVHIMADTLRKYFEVRW 303
+ V+ MA + + FE +W
Sbjct: 657 KEEEPVYKMARIMSREFEYQW 677
>gi|308804515|ref|XP_003079570.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
gi|116058025|emb|CAL54228.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
Length = 446
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++++C +L H++ +F PVD ++ IPDY ++K+PMDLGT+K K+ +Y P
Sbjct: 60 MVRRCREVLNLTKKHRYHKIFLFPVDPVRQGIPDYPQIVKNPMDLGTVKRKLDERKYVGP 119
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F AD+RL FSN YN Q+D IM +T+ + FE W
Sbjct: 120 EDFCADMRLIFSNCALYNGSQSDAGIMGETVHQGFEAAW 158
>gi|390352946|ref|XP_003728004.1| PREDICTED: uncharacterized protein LOC100892105 [Strongylocentrotus
purpuratus]
Length = 1350
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 16/127 (12%)
Query: 180 QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNI 236
Q +KG G+L +K C ++ LMS + + W F PVD L +
Sbjct: 347 QHQKGKKGKL-------------TAQLKYCYGVIKELMSKKHSAYAWPFFKPVDADVLGL 393
Query: 237 PDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
DY +IK PMD+GT+K K+ + Y + FAA+VRL F+N YNPP +DV MA L+
Sbjct: 394 HDYHEIIKTPMDMGTVKVKLENRDYKNANDFAANVRLIFTNCYKYNPPDHDVVGMARKLQ 453
Query: 297 KYFEVRW 303
FEV++
Sbjct: 454 NVFEVKF 460
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L HQF W F+ PVD KL + DYF +IK PMDLGTIK ++ S Y +D
Sbjct: 47 VMKALWKHQFAWPFHHPVDPTKLALLDYFKIIKTPMDLGTIKKRLESIYYHSAKECISDF 106
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
L F+N YN P DV +MA L K F
Sbjct: 107 NLMFTNCYVYNKPGEDVVLMAQALEKLF 134
>gi|224473804|gb|ACN49148.1| bromodomain containing 2 [Oryzias dancena]
Length = 610
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 181 TKKGNSGR-LEPKK--------PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTP 228
+++G SGR ++P K P S + ++ C +L L+S + + W F P
Sbjct: 358 SRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYAWPFYKP 417
Query: 229 VDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDV 288
VD + L + DY +IK PMDL TIK K+ S +Y D F+ADVRL FSN YNPP +DV
Sbjct: 418 VDAVSLGLHDYHEIIKQPMDLSTIKRKMDSREYRDAQQFSADVRLMFSNCYKYNPPDHDV 477
Query: 289 HIMADTLRKYFEV 301
MA L+ FE
Sbjct: 478 VAMARKLQDVFEF 490
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F+ PVD +KL++PDY +IK PMD+GTIK ++ + Y D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 144
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAF 172
>gi|308198663|pdb|3ONI|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd2
In Complex With The Inhibitor Jq1
Length = 114
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 9 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 68
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 69 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 109
>gi|256269147|gb|EEU04482.1| Bdf1p [Saccharomyces cerevisiae JAY291]
Length = 686
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L L++ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELVAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 437
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 438 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 497
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 498 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 557
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 558 SMPNISEDDEVELDLDTLDNHTILTL 583
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDTVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|20302741|gb|AAM18869.1|AF391288_5 unknown [Branchiostoma floridae]
Length = 664
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L+K ++ + H F W F+ PVD +KLNIPDY +IK PMDLG
Sbjct: 31 PKKP-GRMTNQLQYLLK---VVMKAVWKHNFAWPFHEPVDWVKLNIPDYPKIIKTPMDLG 86
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D L F+N YN P DV++MA TL K F
Sbjct: 87 TIKKRLETNYYYSAKECIQDFNLMFTNCYVYNKPGEDVYLMAQTLEKLF 135
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 13/139 (9%)
Query: 168 GKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWV 224
G++ P R P+T++ +S K G S+ +K C+ ++ + + + + W
Sbjct: 334 GRQIKPPRRELPETEQHSS------KKKGKLSAQ----LKYCQGIIKEMFAKKHAAYAWP 383
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD L + DY +IKHPMDLGT+K K+ + +Y FA+D+R+ FSN YNPP
Sbjct: 384 FYEPVDADLLGLHDYHEIIKHPMDLGTVKKKMDTREYKSAQEFASDMRMIFSNCYRYNPP 443
Query: 285 QNDVHIMADTLRKYFEVRW 303
++DV MA L+ FE+++
Sbjct: 444 EHDVVQMARKLQDVFEMKY 462
>gi|296233153|ref|XP_002761896.1| PREDICTED: bromodomain-containing protein 4 [Callithrix jacchus]
Length = 985
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PA SS + +K C +L + + + + W F PVDV L + DY +IKHPMD+
Sbjct: 342 PAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMS 401
Query: 251 TIK 253
TIK
Sbjct: 402 TIK 404
>gi|213406251|ref|XP_002173897.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001944|gb|EEB07604.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 726
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 202 NAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS 258
+A MK C+ +L L Q + + F PVD + PDYF VIKHPMDLGT++ K+
Sbjct: 391 DATEMKFCQAVLKELFKKQHETYAYPFYQPVDPVAFGCPDYFKVIKHPMDLGTMQNKLNH 450
Query: 259 GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+Y++ F ADV L F N +NPP V++M L F +W
Sbjct: 451 NEYANIKDFEADVNLVFKNCYRFNPPGTPVYLMGKKLETVFRSKW 495
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K + +L +L + F PVD +K NIPDY +IKHPMDL T++ K+T+ +Y +
Sbjct: 243 KYIQAMLRQLRRCRDSIPFRVPVDPVKQNIPDYPLIIKHPMDLSTMQRKLTNREYDSAQS 302
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
F D+ L F N YN ++ V +M L+ F + K + PV
Sbjct: 303 FIDDMNLMFDNCFLYNGTESPVGVMGKNLQATFTKQLKQLPSSYPV 348
>gi|326495086|dbj|BAJ85639.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 25/247 (10%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI---TSGQY 261
LM+Q ++ ++ SH++ F PVDV+ L + DY +I PMD TI+ K+ +Y
Sbjct: 4 LMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYHKIITKPMDFSTIQNKMEGKDGTKY 63
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------KAIEKK 309
+DVRL F+NAMTYN +DVHIMA L FE +W K +E
Sbjct: 64 KSVREIYSDVRLIFNNAMTYNDEHHDVHIMAKLLLDKFEEKWLQLLPKVENEERKHVEPN 123
Query: 310 LPVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRV--MTNEEKRIL 367
T D + + A +T+ + +++ + +++ V+R MT +EKR L
Sbjct: 124 DAPTTDTSPEDAIAKLAKDTDDELN-------EINRQLEELRNMVVQRCKKMTTDEKRKL 176
Query: 368 STELEALL-EELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQ 426
L L E+L +++ +++ +T +E+ +D+DA S+ TL+ L+ + + L +
Sbjct: 177 GAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALERQA 236
Query: 427 QKQANPG 433
A PG
Sbjct: 237 NTAAAPG 243
>gi|313212448|emb|CBY36425.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+++ L +H+F W F PVD ++LN+PDYFT+IK+PMD+ T+K K+ SGQY A
Sbjct: 18 KHIFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYSGQYESAKQCIA 77
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
D L F N YN P +D+ IM ++ + K
Sbjct: 78 DYDLMFENCYNYNRPTDDISIMGKKIQDLLHTKCK 112
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 130 LSSNVVLSPSSDIRSCN---DGQKRPLLESVGGP---SVVLAP-KGKKRAPNGRNGPQTK 182
+S + V SP+ +S N D + + S GGP + AP K + AP R P
Sbjct: 153 MSIDPVPSPAPSSKSMNSATDFESASIAPSPGGPEMPQLSAAPQKNGQSAPTVRTRPNPP 212
Query: 183 KGNSGRLEP-KKPAGAASSSNAMLMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPD 238
K + + PA +S M+ C +L L Q+ W F PVDV L + D
Sbjct: 213 KRKTESISSFDGPAKKSSMPKKKEMRVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHD 272
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y+ VIK PMDL + I + Y+D F AD+ L F N YNPP ++V MA+ L+K
Sbjct: 273 YYDVIKRPMDLSLAQKNIDNDMYNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKV 332
Query: 299 FEVR 302
FE +
Sbjct: 333 FEAK 336
>gi|308498241|ref|XP_003111307.1| CRE-BET-1 protein [Caenorhabditis remanei]
gi|308240855|gb|EFO84807.1| CRE-BET-1 protein [Caenorhabditis remanei]
Length = 856
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C LL+ S ++F W F+ PV+ +L + DY +IK PMD+ TIK K+ G+Y
Sbjct: 247 LKPCSKLLSEFFSKKYNEFTWPFHDPVNAAELGLHDYHKIIKEPMDMKTIKRKLECGEYK 306
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
+P F D+RL +N YNP + VH + F+ RW +M SR
Sbjct: 307 EPADFERDIRLMLNNCFIYNPIGDPVHNFGKKFEEVFDKRW----------AEMGDANSR 356
Query: 323 ADDMIETETRMGMPPMKKK------KVSPKETKIKAEPV 355
A + +PP K K S KE +IK EP
Sbjct: 357 ASSVAPQSAPAPLPPSTPKIPKTATKGSKKEKEIKTEPA 395
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 174 NGRNGPQTKK-GNSGRLEPKK---------PAGAASSSNAMLMKQCENLLTRLMSHQFGW 223
+G + PQT++ S R +P K P G + L +L H+ W
Sbjct: 3 DGGDQPQTQRPWASPRQQPIKGIVQPRVLPPFGKPTRHTNKLDYIMTTVLKEAAKHKHVW 62
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNP 283
F PVD + L IP Y + PMDL TI+ ++ S Y+ D+ F+N T+N
Sbjct: 63 PFQKPVDAVTLCIPLYHERVLRPMDLKTIESRLKSTYYTCAQECIDDIETVFNNCYTFNG 122
Query: 284 PQNDVHIMADTLRKYFEVRWKAIEK 308
++DV IMA + EV K++E+
Sbjct: 123 KEDDVTIMAQNVH---EVIKKSLEQ 144
>gi|134105292|pdb|2OO1|A Chain A, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105293|pdb|2OO1|B Chain B, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105294|pdb|2OO1|C Chain C, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105295|pdb|2OO1|D Chain D, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|340708300|pdb|3S92|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 113
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 9 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 68
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 69 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 109
>gi|410903440|ref|XP_003965201.1| PREDICTED: bromodomain-containing protein 2-like [Takifugu
rubripes]
Length = 546
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 125/280 (44%), Gaps = 48/280 (17%)
Query: 190 EPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHP 246
EP KP S +K C +L ++S + + W F PVD + L + DY +IKHP
Sbjct: 234 EPPKPEHGLSER----LKFCNVILKEMLSKKHAAYAWPFYEPVDAVALQLNDYHDIIKHP 289
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
MDL T+K K+ G+Y + +FAADV+L FSN YNP +V A L+ FE + I
Sbjct: 290 MDLSTVKRKLDRGEYPNADSFAADVQLIFSNCYKYNPSHLEVVAHAKKLQGVFEKSFAKI 349
Query: 307 EKKLPVTVD-MTAVPSRADDMIETETRM--------GMP---------PMKKKKVSPKET 348
+ T TA ++D E TR+ +P P+ K+K E+
Sbjct: 350 PDEPTGTGQAQTAAFGKSDLTEEGATRLAELQEQVKAVPDHLAAISEVPVNKRKRKDDES 409
Query: 349 KI-------------------KAEPVRRV--MTNEEKRILSTELEALLEELPESIIDFLK 387
K +P + +T EEK LS ++ L + ++ ++
Sbjct: 410 KTDRQTRGSPTSDPGSPCKLKTWDPDNKCLPLTYEEKHQLSLDINRLPGKKLGRVVQIIQ 469
Query: 388 --EHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEK 425
E S ET DE+EID + L TL L++ + L +K
Sbjct: 470 TLEPSMCETNPDEIEIDFEVLKPSTLRRLQQYVKKCLHQK 509
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L H + W F PVD + L + DY +I PMDLGTIK ++ + Y
Sbjct: 32 LQYMQNIVVKSLWRHHYAWPFYEPVDAVGLGLADYHKIITSPMDLGTIKKRLENNYYWTA 91
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 92 SECLQDFNTMFTNCYIYNKPTDDIVLMALTLEKIF 126
>gi|311664|emb|CAA79377.1| BDF1 [Saccharomyces cerevisiae]
Length = 687
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 319 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 378
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F +VRL F N T+NP V++M L + F +W
Sbjct: 379 TMEDFEREVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQG 438
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 439 DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 498
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 499 KRGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 558
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 559 SMPNISEDDEVELDLDTLDNHTILTL 584
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 174 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 233
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 234 NAGISQMARNIQASFE 249
>gi|428171952|gb|EKX40865.1| hypothetical protein GUITHDRAFT_75230, partial [Guillardia theta
CCMP2712]
Length = 87
Score = 93.2 bits (230), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/76 (56%), Positives = 55/76 (72%)
Query: 229 VDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDV 288
VD + L+IP YF +IKHPMDLGT++ K+ SG Y D AFAADVRLTF NAM +NP + V
Sbjct: 1 VDPIALDIPTYFEIIKHPMDLGTVRSKLISGSYKDINAFAADVRLTFDNAMLFNPVGHWV 60
Query: 289 HIMADTLRKYFEVRWK 304
H MA L+ +FE ++
Sbjct: 61 HEMAKNLKSFFESNFQ 76
>gi|150866686|ref|XP_001386360.2| hypothetical protein PICST_73625 [Scheffersomyces stipitis CBS
6054]
gi|149387942|gb|ABN68331.2| transcription factor [Scheffersomyces stipitis CBS 6054]
Length = 636
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C + LMS + + + F PVD + LNIP+YF V+K PMDLGTI+ K+T+ QY
Sbjct: 305 LRFCSQTVKELMSKKHNGYNFPFVAPVDPVALNIPNYFKVVKEPMDLGTIQSKLTNNQYE 364
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA 305
+ F D+RL F N +NP ++V++M L F+ RW A
Sbjct: 365 NGDEFERDIRLVFKNCYIFNPEGSEVNMMGHRLEAVFDKRWAA 407
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD++KLNIP Y+ I PMDL TI+ K+ Y D D L +N +N
Sbjct: 154 FLHPVDIVKLNIPFYYNYIPRPMDLSTIETKVHVNAYEDSNQIVEDFNLMVANCKKFNGE 213
Query: 285 QNDVHIMADTLRKYFE 300
+ MAD ++ +FE
Sbjct: 214 NAGISKMADNIQAHFE 229
>gi|156230233|gb|AAI51887.1| Brd3b protein [Danio rerio]
Length = 500
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L ++S + + W F PVD L + DY +IK PMDL T+K K+ S +Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-----EKKLPVTVDMT 317
D FAADVRL FSN YNPP ++V MA L+ FE+++ + E P V T
Sbjct: 355 DAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDEPAEPSSPNAVSAT 414
Query: 318 AV 319
AV
Sbjct: 415 AV 416
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F TPVD +KLN+PDY VIK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 GECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|47209011|emb|CAF91369.1| unnamed protein product [Tetraodon nigroviridis]
Length = 530
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 121/270 (44%), Gaps = 50/270 (18%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C LL ++S + + W F PVD L + DY +IK+PMDL T+K K+ G+Y
Sbjct: 261 LKFCNVLLKEMLSKKHAAYAWPFYEPVDAEALQLHDYHDIIKYPMDLSTVKRKMDGGEYP 320
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI--EKKLPVTVDMTA-- 318
D +FAADVRL FSN YNP Q +V A L+ FE + I E P A
Sbjct: 321 DADSFAADVRLIFSNCYRYNPAQLEVVAQAKKLQGVFEKSFAKIPDEPANPGQAPAAASG 380
Query: 319 ----VPSRADDMIETETRMG----------------MPPMKKKKV------------SPK 346
RA + E + + G +PP K+KK SP
Sbjct: 381 KSDRTDERAAPLAEVQEQAGADQDKAAPDRLAAVSEVPPNKRKKKDDQNNIDRQNRGSPT 440
Query: 347 ------ETKIKA-EPVRRV--MTNEEKRILSTELEALLEELPESIIDFLK--EHSAGETG 395
K+K+ +P + +T EEK LS ++ L + ++ ++ E S E
Sbjct: 441 FDSGNLWKKLKSWDPEAKCLPLTYEEKHQLSLDINRLPGKKLGCVVQIIQTLEPSTCEAN 500
Query: 396 EDELEIDIDALSDDTLFALRKLLDDYLLEK 425
DE+EID + L TL L++ + L ++
Sbjct: 501 PDEIEIDFEVLKPSTLRQLQQYVKHCLHQQ 530
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 210 ENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+N++ + L H + W F PVD + L + DY +I PMDLGTIK ++ + Y
Sbjct: 37 QNVVVKSLWRHHYAWPFYEPVDAVALGLSDYHKIITSPMDLGTIKKRLENNYYWTASECL 96
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA TL K F
Sbjct: 97 QDFNTMFTNCYIYNKPTDDIVLMALTLEKIF 127
>gi|395854578|ref|XP_003799760.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Otolemur garnettii]
Length = 773
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L +++ + + W F VDV L + +Y ++KHPMDLGTIK K+ + +Y
Sbjct: 203 LRHCSEILKEMLAKKHFSYAWPFYNSVDVNALGLHNYXDIVKHPMDLGTIKWKMDNQEYK 262
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL N YNPP ++V M L+ FE+ + I
Sbjct: 263 DAYEFAADVRLMLMNCYKYNPPDHEVVTMTKMLQDVFEMHFXKI 306
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MDL TIK + + Y D+ FSN YN P +D+ +MA TL+K F
Sbjct: 1 MDLNTIKKHLENKYYVKASECIEDLNTMFSNCYLYNKPXDDIVLMAQTLKKLF 53
>gi|395334140|gb|EJF66516.1| Bromodomain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 191 PKKPAGAASSSNAML---MKQCENLLTRL---MSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
P+K NA++ MK CE +L L +Q F PVD +K+ IP+Y ++K
Sbjct: 433 PRKSRKTKGPKNAIVAEQMKFCEKILKDLHQKQHYQIAHPFYEPVDPIKMGIPEYPKIVK 492
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
PMDL T+K K+ +G Y P F D RL N MT+NPP N VH +L+ F+ +WK
Sbjct: 493 KPMDLSTMKRKLDTGDYPTPEKFRDDFRLMVKNCMTFNPPGNPVHEAGKSLQNLFDEKWK 552
Query: 305 AI 306
+
Sbjct: 553 NL 554
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P +PAG ++ S A + T G N PVD + L IP Y VIK PMD
Sbjct: 237 PAEPAGPSTLSVAQWRFSSSTVRTLKKMKDAGPFLN-PVDPVALGIPHYPQVIKRPMDFS 295
Query: 251 TIKCKITSG------------QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
TI+ K+ + +Y F DVRL F+N +T+N P + V M +
Sbjct: 296 TIERKLAASNPAKPDPNPSNPRYHHAEQFVQDVRLIFTNCVTFNGPDHPVTQMGKRVEAV 355
Query: 299 FEVRWKAI 306
F+ + K +
Sbjct: 356 FDKQIKQM 363
>gi|426023907|sp|F1QW93.2|BRDT_DANRE RecName: Full=Bromodomain testis-specific protein
Length = 918
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + S + + W F PVD L + DY +I PMD+ TIK K+ + +Y+
Sbjct: 273 LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYT 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D L FAAD+RL FSN YNPP ++V MA L+ FE R+ I
Sbjct: 333 DALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 181 TKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDY 239
T GN E K P +N + + E ++ R L H F W F PVD ++LN+PDY
Sbjct: 11 TMNGNPPPPEFKNPKKPGRLTNHL--QYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDY 68
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+T+IK+PMDL TI+ ++ + Y + D F+N YN P +D+ +MA L K F
Sbjct: 69 YTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLF 128
>gi|432910838|ref|XP_004078550.1| PREDICTED: bromodomain-containing protein 2-like [Oryzias latipes]
Length = 830
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C LL ++S + + W F TPVD L + DY +IK PMDL TIK K+ +Y
Sbjct: 386 LRYCSGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCREYR 445
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FA+DVRL FSN YNPP +DV MA L+ FE +
Sbjct: 446 DAQQFASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFSF 486
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ L+ L H+F W F+ PVD +L +PDY+ +IK PMD+GTIK ++ + Y
Sbjct: 94 KTLMKCLWRHEFAWPFHEPVDAYRLKLPDYYKIIKQPMDMGTIKKRLENSFYRSASECIQ 153
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P++D+ +MA +L K F
Sbjct: 154 DFNTMFTNCYIYNKPKDDIVLMAQSLEKIF 183
>gi|359496779|ref|XP_002264867.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE2-like
[Vitis vinifera]
Length = 499
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 139 SSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAA 198
S + R+ Q P E + G + ++PK KK + + R+ P SGR + K+P
Sbjct: 183 SKEKRTPKANQCYPPSEFLIGKNKTVSPKSKKVSGSKRSLPVA----SGR-DSKRPMPEP 237
Query: 199 SSSNAM------LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
M +M++C +LT+LM H+FGWVFN PVDV+ L + DY ++K PMDLG++
Sbjct: 238 EPEPLMDKLVSSMMRRCGQILTKLMKHKFGWVFNKPVDVVGLGLHDYHKIVKQPMDLGSV 297
Query: 253 KCKITSGQYSDPLAFAADVRLTF 275
K K+ Y PL FA+D ++F
Sbjct: 298 KSKLERKVYLSPLDFASDREMSF 320
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
Query: 357 RVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTLFALR 415
R M+ EEK L L + E E ++ +++ + + D++E+DI+A+ +TL+ L
Sbjct: 316 REMSFEEKAKLGMNLXNVPPEKMEQLVAIIRKRNPHMAQDGDDIELDIEAVDIETLWELD 375
Query: 416 KLLDDY--LLEKQQKQANPGPCEMEV-LNESGLSNSS--MQLCKGNDLVDEDVDIVGGND 470
+ + +Y + K ++Q + LN+S ++++ Q K ++ +EDVDI G +
Sbjct: 376 RFVSNYKKMESKIRRQGLIMNQTLATQLNKSPVTDNPDVGQKNKKGEIGEEDVDI--GEE 433
Query: 471 PPVTDIPPVAIEKDAA 486
PV+ PPV I+KDAA
Sbjct: 434 MPVSHFPPVEIDKDAA 449
>gi|185134173|ref|NP_001117185.1| bromodomain containing 2 [Salmo salar]
gi|148362162|gb|ABQ59684.1| BRD2 [Salmo salar]
Length = 815
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 175 GRNGPQTKKGNSGRLEPKKPAGAASSSNAML-----------MKQCENLLTRLMSHQ--- 220
G P ++G SGR P KP + L ++ C +L L+S +
Sbjct: 338 GTKAPAGRRGVSGR--PIKPPKKDLPDSVQLQPVRRGKLGQQLRYCNGILKELLSKKHAA 395
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+ W F PVD L + DY +IK PMDL TIK K+ S +Y D FA DVR+ +SN
Sbjct: 396 YAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYRDAQQFAGDVRIMYSNCYK 455
Query: 281 YNPPQNDVHIMADTLRKYFEV 301
YNPP +DV MA L+ FE
Sbjct: 456 YNPPDHDVVAMARKLQDVFEF 476
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L H F W F+ PVD KL++PDY +IK PMD+GTIK ++ + Y D
Sbjct: 88 MMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
>gi|312373441|gb|EFR21184.1| hypothetical protein AND_17422 [Anopheles darlingi]
Length = 1442
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 26 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 85
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R I
Sbjct: 86 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANI 129
>gi|146147391|gb|ABQ01994.1| bromodomain containing 2 [Salmo salar]
gi|148362147|gb|ABQ59670.1| BRD2 [Salmo salar]
Length = 815
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 175 GRNGPQTKKGNSGRLEPKKPAGAASSSNAML-----------MKQCENLLTRLMSHQ--- 220
G P ++G SGR P KP + L ++ C +L L+S +
Sbjct: 338 GTKAPAGRRGVSGR--PIKPPKKDLPDSVQLQPVRRGKLGQQLRYCNGILKELLSKKHAA 395
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+ W F PVD L + DY +IK PMDL TIK K+ S +Y D FA DVR+ +SN
Sbjct: 396 YAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYRDAQQFAGDVRIMYSNCYK 455
Query: 281 YNPPQNDVHIMADTLRKYFEV 301
YNPP +DV MA L+ FE
Sbjct: 456 YNPPDHDVVAMARKLQDVFEF 476
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 153 LLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENL 212
L E GP L P G+ P+G P N G A++ L +
Sbjct: 43 LFEGFEGPP--LLPHGQA-PPSGSPRPLVHDTNR--------QGRATNQLQFLQRAMMKY 91
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVR 272
L R H F W F+ PVD KL++PDY +IK PMD+GTIK ++ + Y D
Sbjct: 92 LWR---HHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDFN 148
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 149 TMFTNCYIYNKPTDDIVLMAQSLEKAF 175
>gi|168003123|ref|XP_001754262.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694364|gb|EDQ80712.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Query: 636 LERRHREEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQMMEKTVDINE 695
+ERR REEKARL AEAKAAE +RKAEAEAA ++KRE ERE AR+ LQ ME+TV+I+E
Sbjct: 1 MERRQREEKARLHAEAKAAEMTKRKAEAEAALLVRQKREAEREEARRELQQMERTVEIDE 60
Query: 696 NSRFMEDLEMLRIAQDEQLPSFTAEA--SPDHLQDRLGSFKFQGSTNPLEQLGLYMK 750
NS ++DLE LR E + +A + D + QG +NPLEQLGLYM+
Sbjct: 61 NSGILKDLERLRSVPLEAMLGGGHDAGNGDEGSADGSSTIALQGGSNPLEQLGLYMR 117
>gi|159164570|pdb|2G4A|A Chain A, Solution Structure Of A Bromodomain From Ring3 Protein
Length = 116
Score = 92.4 bits (228), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L+S + + W F PVD L + DY +IKHPMDL T+K K+ + Y
Sbjct: 3 LKHCNVILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 62
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP +DV MA L+ FE R+
Sbjct: 63 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 103
>gi|255732041|ref|XP_002550944.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131230|gb|EER30790.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 730
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 203 AMLMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
A ++ C + LMS + + + F PVD + LNIP+Y ++K PMDLGTI+ K+T+
Sbjct: 374 AAELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYREIVKEPMDLGTIQTKLTNN 433
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW--KAIEKKLPVTVDMT 317
+Y + F DVRL F N +NP DV++M L F+ +W K + + P D++
Sbjct: 434 EYENGDQFEKDVRLVFKNCYAFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNTDVS 493
Query: 318 AVPSRADDMIETETRMGM 335
++D + E M
Sbjct: 494 DGNYSSEDEADVEISEAM 511
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 211 NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAAD 270
N++ + ++ F PVD +KLNIP Y+ I PMDL TI+ KI Y D D
Sbjct: 215 NVIKVIKRNREAVPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKINLKAYEDVSQIIDD 274
Query: 271 VRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKLPVTVDMTAVPSRA 323
L N +N + MA ++ FE K K+LPV V+++ V + A
Sbjct: 275 FNLMVKNCKKFNGEAAGISKMASNIQAQFEKHMVKVPPKELPVGVNISTVTAPA 328
>gi|33416361|gb|AAH55533.1| Brd3b protein [Danio rerio]
Length = 499
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L ++S + + W F PVD L + DY +IK PMDL T+K K+ S +Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-----EKKLPVTVDMT 317
D FAAD+RL FSN YNPP ++V MA L+ FE+++ + E P V T
Sbjct: 355 DAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDEPAEPSSPNAVSAT 414
Query: 318 AV 319
AV
Sbjct: 415 AV 416
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F TPVD +KLN+PDY VIK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 GECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|156914867|gb|AAI52645.1| Brd3b protein [Danio rerio]
gi|163916192|gb|AAI57602.1| LOC100135304 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
++P S N L K C+ +L ++S + + W F PVD L + DY +IK PMD
Sbjct: 282 QQPGNKKSKLNGHL-KYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMD 340
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI-- 306
L T+K K+ S +Y D FAAD+RL FSN YNPP ++V MA L+ FE+++ +
Sbjct: 341 LSTVKKKMDSREYPDAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPD 400
Query: 307 ---EKKLPVTVDMTAV 319
E P V TAV
Sbjct: 401 EPAEPSSPNAVSATAV 416
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F TPVD +KLN+PDY VIK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 95 GECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|348541135|ref|XP_003458042.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 821
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 21/154 (13%)
Query: 160 PSVVLAPKGKKRAPNGRNGPQTKKGNSGR-LEPKK--------PAGAASSSNAMLMKQCE 210
P+VV+ KG G N ++G SGR ++P K P S + M+ C
Sbjct: 344 PAVVVGTKGA-----GGN----RRGVSGRPIKPPKKDLPDSILPPPVRRSKLSPQMRYCS 394
Query: 211 NLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
+L L+S + + W F PVD L + DY +IK PMDL TIK K+ +Y + F
Sbjct: 395 GVLKELLSKKHAAYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDGREYREAHQF 454
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
+ADVRL FSN YNPP +DV MA L+ FE
Sbjct: 455 SADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEF 488
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 179 PQTKKGNSGRLEP--KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNI 236
P ++ SG +P K P +N + Q + LL L H F W F+ PVD +KLN+
Sbjct: 53 PHSQMAPSGPPQPPVKDPNRQGRMTNQLQFLQ-KVLLKSLWRHHFAWPFHEPVDAVKLNL 111
Query: 237 PDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
PDY +IK PMD+GTIK ++ + Y D F+N YN P +D+ +MA +L
Sbjct: 112 PDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLE 171
Query: 297 KYF 299
K F
Sbjct: 172 KAF 174
>gi|241955217|ref|XP_002420329.1| bromodomain-containing transcription factor, putative; protein
involved in transcription initiation at TATA-containing
promoters, putative [Candida dubliniensis CD36]
gi|223643671|emb|CAX41404.1| bromodomain-containing transcription factor, putative [Candida
dubliniensis CD36]
Length = 721
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 203 AMLMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
A ++ C + LMS + + + F PVD + LNIP+Y ++KHPMDLGTI+ K+ +
Sbjct: 373 AAELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKHPMDLGTIQSKLANN 432
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW--KAIEKKLPVTVDMT 317
+Y + F DVRL F N +NP DV++M L F+ +W K + + P D++
Sbjct: 433 EYENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKWASKPVPEPTPQNSDVS 492
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 216 LMSHQFGWVFNT---------------PVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L HQ +V NT PVD +KLN+P Y+ I PMDL TI+ KI
Sbjct: 195 LPPHQAKFVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKA 254
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE-VRWKAIEKKLPV 312
Y + D L N +N + MA ++ FE + K K+LPV
Sbjct: 255 YENVSQVVDDFNLMVKNCKKFNGEAAGISKMAMNIQAQFEKLMVKVPPKELPV 307
>gi|170036200|ref|XP_001845953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878751|gb|EDS42134.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 848
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 410 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 469
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R I
Sbjct: 470 SANEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANI 513
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 205 LMKQCENLLTRLMS----HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L Q LL +M HQF W F PVD KLN+PDY +IK PMDLGT+K ++ +
Sbjct: 57 LTNQLHFLLKTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTVKKRLENNY 116
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
Y D + FSN YN P DV +MA TL K F
Sbjct: 117 YWTSKEAIQDFNIMFSNCYVYNKPGEDVVVMAQTLEKLF 155
>gi|347968593|ref|XP_003436250.1| AGAP002807-PB [Anopheles gambiae str. PEST]
gi|333467932|gb|EGK96763.1| AGAP002807-PB [Anopheles gambiae str. PEST]
Length = 1778
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 408 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 467
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R I
Sbjct: 468 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANI 511
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 205 LMKQCENLLTRLMS----HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L Q LL +M HQF W F PVD KLN+PDY +IK PMDLGTIK ++ +
Sbjct: 33 LTNQLHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY 92
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
Y D F+N YN P DV +MA TL K F + + K
Sbjct: 93 YWTSKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTKVSLMPK 140
>gi|326923162|ref|XP_003207809.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Meleagris gallopavo]
Length = 2126
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +L+ L +H+ W F PV+ +KL +P Y VIK PMD TI+ K+TSGQY + AF+
Sbjct: 2027 CSMILSELETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIRDKLTSGQYPNVEAFS 2084
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DVRL F N T+N +D+ +RKYFE +W I K
Sbjct: 2085 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIFK 2124
>gi|431892496|gb|ELK02931.1| Bromodomain-containing protein 4 [Pteropus alecto]
Length = 1345
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 242 VIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
+IKHPMD+ TIK K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+
Sbjct: 393 IIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEM 452
Query: 302 RWKAI--EKKLPVT-VDMTAVP 320
R+ + E + PV V AVP
Sbjct: 453 RFAKMPDEPEEPVVAVSSPAVP 474
>gi|348682241|gb|EGZ22057.1| hypothetical protein PHYSODRAFT_491564 [Phytophthora sojae]
Length = 1223
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 211 NLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
++L +LMS ++ G VFNTPVD + L +P Y T+++HPMDLGTIK + +G+Y + F
Sbjct: 383 DILLKLMSDPRNRHG-VFNTPVDPVALELPTYTTIVQHPMDLGTIKRNLAAGEYLELEDF 441
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
+DVRL F NAM +NP + +H+ A+ L K F KA EK+
Sbjct: 442 VSDVRLVFENAMLFNPESHYIHVDAEVLLKRFNDSVKAEEKR 483
>gi|347968595|ref|XP_312107.4| AGAP002807-PA [Anopheles gambiae str. PEST]
gi|333467931|gb|EAA07774.4| AGAP002807-PA [Anopheles gambiae str. PEST]
Length = 870
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 408 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 467
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R I
Sbjct: 468 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANI 511
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 205 LMKQCENLLTRLMS----HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L Q LL +M HQF W F PVD KLN+PDY +IK PMDLGTIK ++ +
Sbjct: 33 LTNQLHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY 92
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
Y D F+N YN P DV +MA TL K F
Sbjct: 93 YWTSKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLF 131
>gi|410926019|ref|XP_003976476.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 820
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 182 KKGNSGR-LEPKK--------PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPV 229
++G SGR ++P K P S + ++ C +L L+S + + W F PV
Sbjct: 358 RRGVSGRPIKPPKKDLPDSMLPPPVRRSKLSPQLRYCNGVLKELLSKKHAGYAWPFYKPV 417
Query: 230 DVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVH 289
D L + DY +IK PMDL TIK K+ + +Y D FAADVRL FSN YNPP +DV
Sbjct: 418 DASSLGLHDYHDIIKQPMDLSTIKRKMDNREYLDSQQFAADVRLMFSNCYKYNPPDHDVV 477
Query: 290 IMADTLRKYFEV 301
MA L+ FE
Sbjct: 478 AMARKLQDVFEF 489
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL L H F W F+ PVD +KLN+PDY +IK PMD+GTIK ++ + Y D
Sbjct: 88 LLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 147
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
>gi|405967643|gb|EKC32780.1| Bromodomain testis-specific protein [Crassostrea gigas]
Length = 1173
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 25/196 (12%)
Query: 127 VASLSSNV-------VLSPSSDIRSCNDGQKR------PLL--ESVGGPSVVLAPKGKKR 171
+AS +SN+ V+ P+ ++ G KR P+L S G P +PK +K+
Sbjct: 265 IASSTSNIGGMMDHNVVPPAQPTKTVKRGVKRKADTTTPVLVASSPGDPLYEPSPKVEKK 324
Query: 172 APNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ-FGWVFNTPVD 230
N + P + P K SN ++K +L + + + W F PVD
Sbjct: 325 IINSVSTP---------VMPGKIPAVRRESNRKIIKPKRDLPDEQVGEKAYAWPFYKPVD 375
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
L + DY +IK PMDLGTIK K+ S +Y FA DVRL F+N YNP +DV +
Sbjct: 376 ADVLGLHDYHDIIKKPMDLGTIKKKMESREYKTAAQFAEDVRLIFTNCYRYNPTDSDVVV 435
Query: 291 MADTLRKYFEVRWKAI 306
MA L+ FEV++ +
Sbjct: 436 MARKLQDVFEVKYATM 451
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ +L + HQ+ W F+ PVD+ LN+PDY+ +IK PMDLGTIK ++ + Y
Sbjct: 83 KTVLKAVWRHQYAWPFHKPVDIKLLNLPDYYDIIKQPMDLGTIKERLETNFYYSATECIQ 142
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P+ D+ +MA L K F
Sbjct: 143 DFNQMFTNCYIYNNPKEDIVLMAQVLEKLF 172
>gi|149237571|ref|XP_001524662.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451259|gb|EDK45515.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 788
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C + LMS HQ + + F PVD + LNIP+Y ++KHPMD GTI+ K+T+ QY
Sbjct: 434 LRFCGQTIKELMSKKHQNYNFPFLAPVDAVALNIPNYHDIVKHPMDFGTIQSKLTNNQYE 493
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F DV+L F N +NP DV++M + F+ +W
Sbjct: 494 SGDDFEKDVKLVFHNCYLFNPEGTDVNMMGHRMEAVFDKKW 534
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KLNIP Y+ I PMDL TI+ K+ + Y D FA D L +N +N
Sbjct: 278 FLHPVDTVKLNIPFYYNYIPRPMDLSTIERKLNAKAYEDISQFADDFNLMVANCKKFNGE 337
Query: 285 QNDVHIMADTLRKYFEVR-WKAIEKKLPVTV 314
+ MA ++ +FE A K+LPV V
Sbjct: 338 TAGISRMATNIQAHFEKHMLNAPPKELPVGV 368
>gi|195060207|ref|XP_001995768.1| GH17935 [Drosophila grimshawi]
gi|193896554|gb|EDV95420.1| GH17935 [Drosophila grimshawi]
Length = 1220
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + W F PVD L + DY +IK PMDLGT+K K+ + ++
Sbjct: 515 LKSCNEILKELFSKKHSGCAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREFK 574
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
FAADVRL F+N YNPP +DV M L+ FE+R+ I
Sbjct: 575 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 618
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
+ ++ L H F W F PVD KLN+PDY +IK PMDLGTIK ++ + Y
Sbjct: 43 IKTVMKFLWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWSAKEAV 102
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D+ F+N YN P DV +MA L K +
Sbjct: 103 NDINTMFTNCSVYNKPGEDVVVMAHALEKVY 133
>gi|45382753|ref|NP_990008.1| bromodomain adjacent to zinc finger domain protein 2B [Gallus gallus]
gi|22653663|sp|Q9DE13.1|BAZ2B_CHICK RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=Extracellular matrix protein F22
gi|11526817|gb|AAG36791.1|AF224275_1 extracellular matrix protein F22 [Gallus gallus]
Length = 2130
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +L+ L +H+ W F PV+ +KL +P Y VIK PMD TI+ K+TSGQY + AF+
Sbjct: 2031 CSMILSELETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIRDKLTSGQYPNVEAFS 2088
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DVRL F N T+N +D+ +RKYFE +W I K
Sbjct: 2089 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIFK 2128
>gi|189241564|ref|XP_967957.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1321
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPM 247
P+ PA +K C +L L S + + W F PVD L + DY +IK PM
Sbjct: 349 PQMPAHKPKEKLTEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPM 408
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
DLGT+K K+ + +Y FAADVRL F+N YNP +DV MA L+ FEV++ I
Sbjct: 409 DLGTVKQKMDNREYRSAQEFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKI 467
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ +L + HQF W F PVD KLN+PDY +I+ PMDLGTIK ++ + Y
Sbjct: 44 KTVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQ 103
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA TL K F
Sbjct: 104 DFNTMFTNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|313226820|emb|CBY21965.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+++ L +H+F W F PVD ++LN+PDYFT+IK+PMD+ T+K K+ GQY A
Sbjct: 18 KHIFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYGGQYESAKQCIA 77
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
D L F N YN P +D+ IM ++ + K
Sbjct: 78 DYDLMFENCYNYNRPTDDISIMGKKIQDLLHTKCK 112
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 130 LSSNVVLSPSSDIRSCN---DGQKRPLLESVGGP---SVVLAP-KGKKRAPNGRNGPQTK 182
+S + V SP+ +S N D + + S GGP + AP K + AP R P
Sbjct: 153 MSIDPVPSPAPSSKSMNSATDFESASIAPSPGGPEMPQLSAAPQKNGQSAPTVRTRPNPP 212
Query: 183 KGNSGRLEP-KKPAGAASSSNAMLMKQCENLLTRLM---SHQFGWVFNTPVDVMKLNIPD 238
K + + PA +S M+ C +L L Q+ W F PVDV L + D
Sbjct: 213 KRKTESISSFDGPAKKSSMPKKKEMRVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHD 272
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
Y+ VIK PMDL + I + Y+D F AD+ L F N YNPP ++V MA+ L+K
Sbjct: 273 YYDVIKRPMDLSLAQKNIDNDMYNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKV 332
Query: 299 FEVR 302
FE +
Sbjct: 333 FEAK 336
>gi|270001347|gb|EEZ97794.1| hypothetical protein TcasGA2_TC030708 [Tribolium castaneum]
Length = 815
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPM 247
P+ PA +K C +L L S + + W F PVD L + DY +IK PM
Sbjct: 342 PQMPAHKPKEKLTEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPM 401
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
DLGT+K K+ + +Y FAADVRL F+N YNP +DV MA L+ FEV++ I
Sbjct: 402 DLGTVKQKMDNREYRSAQEFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKI 460
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ +L + HQF W F PVD KLN+PDY +I+ PMDLGTIK ++ + Y
Sbjct: 44 KTVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQ 103
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA TL K F
Sbjct: 104 DFNTMFTNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|19173489|ref|NP_597292.1| GENERAL TRANSCRIPTION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|19171078|emb|CAD26468.1| GENERAL TRANSCRIPTION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|449328789|gb|AGE95065.1| general transcription factor [Encephalitozoon cuniculi]
Length = 370
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 63/116 (54%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+K C +LTRL + F PVD +KL IPDY IKHPMDL TI+ K+ S +Y P
Sbjct: 17 LKYCSQILTRLKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDSKEYEGPE 76
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPS 321
F D+RL FSN TYNPP VH M L + + +++P T +P+
Sbjct: 77 GFDGDMRLMFSNCYTYNPPGTVVHEMGKGLEAVYTDLMAGMPQEIPKKRKKTEMPA 132
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 24/211 (11%)
Query: 209 CENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
C L+ L+ H+ + W F PVD +P Y++VIK PMDL T++ K+ +Y
Sbjct: 157 CSETLSDLVKPKHKAYNWPFLEPVD--GDLVPGYYSVIKEPMDLQTMRSKLEQRRYQSVE 214
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADD 325
F D+ L N +N P +V++ K ++ + + P
Sbjct: 215 EFGRDLELIVENCKKFNAPGTEVYVCGQEFEKAVKMHMQKVS------------PHDIKS 262
Query: 326 MIETETRMGMPPMKKKKVSPKETKIKAE----PVRRVMTNEEKRILSTELEALLEELPES 381
I R M +++ E+K+ + P R + E+ + + + +E ES
Sbjct: 263 RITELKRKVMS--YSREIRMLESKLMEQTGEMPTSRAYSLNERVSIGNAILNMSKEQTES 320
Query: 382 IIDFLKEHSAGETGE-DELEIDIDALSDDTL 411
+ + ++ AGE E DE+E+D+ + D +
Sbjct: 321 VAKIVLKNGAGEFVENDEIEVDMRTIPDHVV 351
>gi|440293462|gb|ELP86579.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 275
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 9/120 (7%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
+C+++ +LMS G FNTPVD + L +P Y TVIK+PMDLGTIK K+ +Y+ F
Sbjct: 8 KCKDINRKLMSQDEGVAFNTPVDPVALRVPTYPTVIKYPMDLGTIKRKLGDKKYTTKDEF 67
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW---------KAIEKKLPVTVDMTA 318
DV LTF +A+ +N P+++VH A L F W A++ +LP+ + T
Sbjct: 68 YMDVILTFQDAIYFNHPESEVHHWAVKLEGLFLKLWTTAFGATKPTAVDPRLPIALSQTV 127
>gi|340381558|ref|XP_003389288.1| PREDICTED: bromodomain-containing protein 2-like [Amphimedon
queenslandica]
Length = 1057
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS--HQF-GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +++ S HQ W F PVDV L + DY +IK PMDL T+K K+ +Y
Sbjct: 456 LRYCLSIVKDFFSKKHQASAWPFYNPVDVKGLGLHDYLDIIKQPMDLTTLKKKLEDREYE 515
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DP FAAD+RL F+N YNPP++DV MA ++ FE ++
Sbjct: 516 DPSQFAADMRLIFTNCYKYNPPEHDVVKMARKVQDIFEFKF 556
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 193 KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
K G S++ +K ++ R H + W F+ PVD + LNIPDYF +IK PMDL I
Sbjct: 188 KGGGNRSTNQLQYLKNVHRIIWR---HHYAWPFHKPVDPVALNIPDYFNIIKRPMDLTLI 244
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
K ++ YS D + F+N TYN P +DV M L + F+
Sbjct: 245 KKQLDHNGYSSAKECIQDFKTMFNNCYTYNKPTDDVVFMCQALERLFD 292
>gi|47216871|emb|CAG11678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 834
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 182 KKGNSGR-LEPKK--------PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPV 229
++G SGR ++P K P S + ++ C +L L+S + + W F PV
Sbjct: 372 RRGVSGRPIKPPKKDLPDSMLPPPVRRSKLSPQLRYCNGVLKELLSKKHAGYAWPFYKPV 431
Query: 230 DVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVH 289
D L + DY +IK PMDL TIK K+ + +Y D FAADVRL FSN YNPP +DV
Sbjct: 432 DASSLGLHDYHDIIKQPMDLSTIKRKMDNREYLDSQQFAADVRLMFSNCYKYNPPDHDVV 491
Query: 290 IMADTLRKYFEV 301
MA L+ FE
Sbjct: 492 AMARKLQDVFEF 503
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL L H F W F+ PVD +KLN+PDY +IK PMD+GTIK ++ + Y D
Sbjct: 59 LLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 118
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 119 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 146
>gi|410968711|ref|XP_003990845.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Felis catus]
Length = 2171
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2072 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2129
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DVRL F N T+N +D+ ++RKYFE +W I K
Sbjct: 2130 VDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKWTDIFK 2169
>gi|440632694|gb|ELR02613.1| hypothetical protein GMDG_05576 [Geomyces destructans 20631-21]
Length = 895
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 203 AMLMKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
A +K CE +L L ++ + F PVD + L IP+YF ++K PMDL TI + SG
Sbjct: 525 ATELKFCEEVLNELKKPKYQGINAPFLIPVDPVALGIPEYFKIVKSPMDLSTITDNLNSG 584
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
Y++ F AD+RL F N +NPP V++M L +F W+
Sbjct: 585 HYANSKDFEADIRLMFKNCYKFNPPSTAVNVMGQELEAFFNSEWQ 629
>gi|432882591|ref|XP_004074106.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 823
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 181 TKKGNSGR-LEPKK--------PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTP 228
+++G SGR ++P K P S + ++ C +L L+S + + W F P
Sbjct: 358 SRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYAWPFYKP 417
Query: 229 VDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDV 288
VD + L + DY +IK PMDL TIK K+ +Y + F+ADVRL FSN YNPP +DV
Sbjct: 418 VDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYREAQQFSADVRLMFSNCYKYNPPDHDV 477
Query: 289 HIMADTLRKYFEVRWKAIEKKLP 311
MA L+ FE + + + P
Sbjct: 478 VAMARKLQDVFEFCFAKMPDEAP 500
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
P +P S + + Q + L L L H F W F+ PVD KLN+PDY +IK P
Sbjct: 60 PPQPPVRDPSRHGRMTNQLQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTP 119
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTI+ ++ + Y D F+N YN P +D+ +MA +L K F
Sbjct: 120 MDMGTIRKRLENNYYRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAF 172
>gi|327270741|ref|XP_003220147.1| PREDICTED: bromodomain testis-specific protein-like [Anolis
carolinensis]
Length = 900
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 181 TKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIP 237
TKKG P +P + ++ K C +LT + S Q + W+F P+DV +
Sbjct: 295 TKKGLPDSQHPPEPTKNIKLTESL--KYCNEILTEMFSKQHEAYAWLFYKPIDVTAPGLE 352
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DY V+K PMDLGTIK K+ + Y D FAAD+RL F N Y+ P +V MA L+
Sbjct: 353 DYNDVVKCPMDLGTIKKKMENNAYKDTQEFAADIRLMFMNCYRYSSPDQEVVTMARKLQD 412
Query: 298 YFEVRWKAI 306
FE+ + I
Sbjct: 413 VFEMHFAKI 421
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ + H F W F+ PVD L +PDY+ +IK+PMDL TI+ ++ Y+ +
Sbjct: 82 VMKAMWRHSFSWPFHQPVDAAGLKLPDYYNIIKNPMDLTTIQKRLEHNYYTCAAECIENF 141
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ F+N YN P +D+ MA L K F
Sbjct: 142 KTMFANCYLYNKPGDDIVFMAQELEKVF 169
>gi|63100516|gb|AAH95028.1| Wu:fi25h02 protein, partial [Danio rerio]
Length = 600
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + S + + W F PVD L + DY +I PMD+ TIK K+ + +Y+
Sbjct: 273 LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYT 332
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D L FAAD+RL FSN YNPP ++V MA L+ FE R+ I
Sbjct: 333 DALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 181 TKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDY 239
T GN E K P +N + + E ++ R L H F W F PVD ++LN+PDY
Sbjct: 11 TMNGNPPPPEFKNPKKPGRLTNHL--QYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDY 68
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+T+IK+PMDL TI+ ++ + Y + D F+N YN P +D+ +MA L K F
Sbjct: 69 YTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLF 128
>gi|291230216|ref|XP_002735064.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Saccoglossus kowalevskii]
Length = 597
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 203 AMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
++ +K C ++ L S + + W F PVD L + DY +IK+PMDLGT+K K+ +
Sbjct: 148 SVQLKYCNGIIKELYSKKHSGYAWPFYKPVDANLLGLHDYHDIIKYPMDLGTVKRKLETR 207
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y++ AADVR F+N YNPP +DV MA L+ FE+++
Sbjct: 208 DYTNANDIAADVRAIFTNCYKYNPPDHDVVAMARKLQDVFEMKF 251
>gi|18157527|dbj|BAB83842.1| RING3 [Oryzias latipes]
Length = 814
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 181 TKKGNSGR-LEPKK--------PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTP 228
+++G SGR ++P K P S + ++ C +L L+S + + W F P
Sbjct: 349 SRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYAWPFYKP 408
Query: 229 VDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDV 288
VD + L + DY +IK PMDL TIK K+ +Y + F+ADVRL FSN YNPP +DV
Sbjct: 409 VDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYREAQQFSADVRLMFSNCYKYNPPDHDV 468
Query: 289 HIMADTLRKYFEVRWKAIEKKLP 311
MA L+ FE + + + P
Sbjct: 469 VAMARKLQDVFEFCFAKMPDEAP 491
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
P +P S + + Q + L L L H F W F+ PVD KLN+PDY +IK P
Sbjct: 60 PPQPPVRDPSRHGRMTNQLQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTP 119
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTI+ ++ + Y D F+N YN P +D+ +MA +L K F
Sbjct: 120 MDMGTIRKRLENNYYRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAF 172
>gi|262189359|gb|ACY30377.1| BRD2 [Salmo salar]
Length = 824
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + W F PVD L + DY +IK PMDL TIK K+ S +Y
Sbjct: 382 LRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYR 441
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
D FA DVR+ +SN YNPP +DV MA L+ FE
Sbjct: 442 DAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFEF 480
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L H F W F+ PVD KL++PDY +IK PMD+GTIK ++ + Y D
Sbjct: 88 MMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
>gi|345797221|ref|XP_856450.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Canis lupus familiaris]
Length = 2169
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2070 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2127
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DVRL F N T+N +D+ ++RKYFE +W I K
Sbjct: 2128 VDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKWTDIFK 2167
>gi|62122590|dbj|BAD93258.1| RING3 [Oryzias latipes]
Length = 814
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 181 TKKGNSGR-LEPKK--------PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTP 228
+++G SGR ++P K P S + ++ C +L L+S + + W F P
Sbjct: 349 SRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYAWPFYKP 408
Query: 229 VDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDV 288
VD + L + DY +IK PMDL TIK K+ +Y + F+ADVRL FSN YNPP +DV
Sbjct: 409 VDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYREAQQFSADVRLMFSNCYKYNPPDHDV 468
Query: 289 HIMADTLRKYFEVRWKAIEKKLP 311
MA L+ FE + + + P
Sbjct: 469 VAMARKLQDVFEFCFAKMPDEAP 491
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
P +P S + + Q + L L L H F W F+ PVD KLN+PDY +IK P
Sbjct: 60 PPQPPVRDPSRHGRMTNQLQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTP 119
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MD+GTIK ++ + Y D F+N YN P +D+ +MA +L K F
Sbjct: 120 MDMGTIKKRLENNYYRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAF 172
>gi|296421346|ref|XP_002840226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636440|emb|CAZ84417.1| unnamed protein product [Tuber melanosporum]
Length = 825
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+ +L L Q+ + F PVD + LNIPDYF +IK PMDL TI K+ + QY
Sbjct: 461 LRFCDIVLKELHKKQYHDTAFPFYVPVDPVALNIPDYFKIIKKPMDLSTISTKLKTNQYD 520
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F AD+RL FSN +NP VH L F+ +W
Sbjct: 521 SASDFEADIRLMFSNCYKFNPSDQHVHKCGKALENIFDQKW 561
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGT 251
A + +S+ + Q + LL + S + F PVD +KLN+P+YF VI +PMDL T
Sbjct: 232 AASYNSTAPLTATQIKYLLVVIRSLRRTKDARPFTMPVDPIKLNVPNYFEVITNPMDLQT 291
Query: 252 IKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
++ K+ + +YS F AD L +N +T+N ++ V ++ FE
Sbjct: 292 MEKKLNNKEYSSSRDFLADFNLILTNCVTFNGREHPVSENGRVMKAVFE 340
>gi|353235918|emb|CCA67923.1| related to TAF2-component of TFIID complex [Piriformospora indica DSM
11827]
Length = 1782
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
P+ A S + K E +L R+ +H F PVD ++ N P YF VIKHPMDL T+
Sbjct: 1225 PSWAKSGLTSQEKKMIEAILKRVTAHPSAIWFLHPVDPVRHNAPTYFDVIKHPMDLSTVA 1284
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK----AIEK 308
K+ SGQY + FA D +L SNA +NPP D H A + ++F+ WK A+EK
Sbjct: 1285 SKLKSGQYGNRQQFADDFKLILSNAYLFNPPGTDPHNDALKIEEFFDKMWKTTDDAVEK 1343
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
+C+ LL +L GW+F PV+ + Y+ IKHPMD T++ K+ QY+ F
Sbjct: 1557 KCKALLQKLADVPHGWIFLNPVNSTLPGLETYYEEIKHPMDYSTMRRKLDKKQYATMEDF 1616
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA-IEKKLP 311
A D+RL ++N +N D+ + DT+ ++ W + +++K+P
Sbjct: 1617 ADDLRLVYANGRQFNAAAPDILDLIDTIEALWKKEWPSMLKRKMP 1661
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 203 AMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKH--PMDLGTIKCKITSGQ 260
A L +Q L +L + +F+ PVD + L IP YF VI DL TIK K+ G
Sbjct: 1662 AELKRQLAQALNQLKAEDVNMIFHFPVDPIALGIPHYFDVIAREDARDLSTIKAKLDKGG 1721
Query: 261 YSDPLAFAADVRLTFSNAMTYN 282
Y DVRL FSNA +N
Sbjct: 1722 YQTAEQVHRDVRLMFSNAYKFN 1743
>gi|148362124|gb|ABQ59651.1| BRD2 [Salmo salar]
gi|148362144|gb|ABQ59668.1| BRD2 [Salmo salar]
Length = 824
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + W F PVD L + DY +IK PMDL TIK K+ S +Y
Sbjct: 382 LRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYR 441
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
D FA DVR+ +SN YNPP +DV MA L+ FE
Sbjct: 442 DAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFEF 480
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L H F W F+ PVD KL++PDY +IK PMD+GTIK ++ + Y D
Sbjct: 88 MMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
>gi|126326221|ref|XP_001366439.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Monodelphis domestica]
Length = 2180
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQYS+ FA
Sbjct: 2081 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYSNLETFA 2138
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2139 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2173
>gi|224013794|ref|XP_002296561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968913|gb|EED87257.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 89
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 58/89 (65%)
Query: 211 NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAAD 270
+LL L +H GWVFN+PVD ++L +PDYF VIK+PMDLGT+K ++ +G Y D
Sbjct: 1 DLLKGLSNHNHGWVFNSPVDPVELGLPDYFEVIKNPMDLGTVKKRLENGLYRSINEVEVD 60
Query: 271 VRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ LTF NAM YNP + V MA L+ F
Sbjct: 61 INLTFDNAMLYNPEGSVVWSMAKELKDKF 89
>gi|344251852|gb|EGW07956.1| Bromodomain testis-specific protein [Cricetulus griseus]
Length = 565
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+ W F PVD L + +Y+ ++K+PMDLGTIK K+ + +Y D FAADVRL F N
Sbjct: 9 YAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYK 68
Query: 281 YNPPQNDVHIMADTLRKYFEVRWKAI 306
YNPP ++V MA L+ FE+ + I
Sbjct: 69 YNPPDHEVVSMARMLQDVFEMHFAKI 94
>gi|159164343|pdb|2E7N|A Chain A, Solution Structure Of The Second Bromodomain From Human
Bromodomain-Containing Protein 3
Length = 117
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K K+ +Y
Sbjct: 14 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 73
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D FAADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 74 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 114
>gi|301779808|ref|XP_002925321.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Ailuropoda melanoleuca]
Length = 2169
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2070 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2127
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DVRL F N T+N +D+ +RKYFE +W I K
Sbjct: 2128 VDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDIFK 2167
>gi|224057894|ref|XP_002299377.1| global transcription factor group [Populus trichocarpa]
gi|222846635|gb|EEE84182.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 19/224 (8%)
Query: 215 RLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---YSDPLAFAADV 271
++ H++ W F PVDV L + DY+ VI+ PMD TIK ++ + Y + ADV
Sbjct: 4 QIAQHKWAWPFLEPVDVEGLCLHDYYEVIEKPMDFRTIKNRMEAKDGTGYKNVREIYADV 63
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETET 331
RL F NAM YN ++DVH+MA TL + FE +W + LP + + + T
Sbjct: 64 RLVFKNAMKYNDERDDVHVMARTLLEKFEEKWLQL---LPKVAEEEKRREKEQTATQVAT 120
Query: 332 RMG----MPPMKK------KKVSPKETKIKAEPVR--RVMTNEEKRILSTELEALLEELP 379
++ M + V + +I+ VR R ++ EEK+ L T L L +
Sbjct: 121 KLAEESSYANMAQDLSNELHGVDMQLERIREMVVRNSRKISTEEKKKLGTALTQLSHQDL 180
Query: 380 ESIIDFLKEHS-AGETGEDELEIDIDALSDDTLFALRKLLDDYL 422
++ + EH+ + + E+ +D+D SD TL+ L+ + D L
Sbjct: 181 IRALEIVAEHNPSFQATAQEVNLDMDTQSDVTLWRLKVFVQDAL 224
>gi|259090114|pdb|2WP1|A Chain A, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
gi|259090115|pdb|2WP1|B Chain B, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
Length = 126
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L +++ + + W F PVD L + +Y+ V+K+PMDLGTIK K+ + +Y
Sbjct: 16 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 75
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FAADVRL F N YNPP ++V MA TL+ FE+ + I
Sbjct: 76 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKI 119
>gi|281337460|gb|EFB13044.1| hypothetical protein PANDA_014792 [Ailuropoda melanoleuca]
Length = 2122
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2023 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2080
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DVRL F N T+N +D+ +RKYFE +W I K
Sbjct: 2081 VDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDIFK 2120
>gi|156356469|ref|XP_001623945.1| predicted protein [Nematostella vectensis]
gi|156210690|gb|EDO31845.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 191 PKKPAGAASSSNAM--LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
P++PA ++N + L+K +L L H W F PVD +KLN+PDY T+IK PMD
Sbjct: 6 PQQPAPKTRTTNQLQFLLK---TVLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMD 62
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
LGTIK K+ + +Y D RL +N TYN P +D+ +M ++ K F
Sbjct: 63 LGTIKKKLENNEYPCAQECIEDFRLMINNCYTYNKPGDDIVLMCQSMDKLFH 114
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + S + + W F PVD L + DY +IK PMD+ IK K+ + Y
Sbjct: 287 LKYCSTILKDMFSKKHYAYAWPFYKPVDAEALGLHDYHDIIKQPMDMTEIKNKLENRAYD 346
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
P FAAD+RL FSN YNPP +DV MA L+ FE+++
Sbjct: 347 SPSEFAADIRLMFSNCYRYNPPDHDVVKMARQLQDVFEMKF 387
>gi|403415508|emb|CCM02208.1| predicted protein [Fibroporia radiculosa]
Length = 771
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 191 PKKPAGAASSSNAML---MKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIK 244
PKKP N M +K CE +L L + F PVD +KL IP Y V+K
Sbjct: 410 PKKPRKTKLPKNDMYDQQLKHCEKVLKDLHKKSLYGIAHPFYEPVDWVKLEIPQYPKVVK 469
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
PMDL TIK K+T G+YS P F D +L N +NPP+N VH L + F+ +W+
Sbjct: 470 RPMDLSTIKRKLTDGEYSTPDKFRDDFKLMIRNCFAFNPPKNPVHEAGKELDRLFDDKWR 529
Query: 305 AI 306
+
Sbjct: 530 EL 531
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA-- 266
C + + L + F PVD + LN+P Y +++KHPMD T++ K+TS S P
Sbjct: 232 CTSTIRTLKKIKDAGPFLHPVDPVALNVPHYPSIVKHPMDFSTVERKMTSCNPSKPDPNP 291
Query: 267 ----------FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
F ADVRL F+N +N P + + M + F+ + K +
Sbjct: 292 ANPRYNNVDEFIADVRLIFTNCALFNGPDHPITAMGRRVEAVFDKQIKQL 341
>gi|298706227|emb|CBJ29268.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 898
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
++ C L L+ HQ G F PVD + PDY VI+ PMDLGT+ + + +Y D
Sbjct: 58 LELCRQALEELIRHQHGAPFTAPVDPTRDRCPDYLMVIEQPMDLGTVAETLDAMKYHDAG 117
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
AF +DVRL F NA YNPP++ +H+ A L K +
Sbjct: 118 AFVSDVRLIFDNARKYNPPKHPIHVAASKLAKTW 151
>gi|410979451|ref|XP_003996097.1| PREDICTED: bromodomain-containing protein 3 [Felis catus]
Length = 695
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
K+ S +Y D FAAD+RL FSN YNPP ++V MA L+ FE+R+
Sbjct: 332 KMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 380
>gi|159164649|pdb|2I8N|A Chain A, Solution Structure Of The Second Bromodomain Of Brd4
Length = 114
Score = 90.9 bits (224), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + + + + W F PVDV L + DY +IKHPMD+ TIK K+ + +Y
Sbjct: 3 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 62
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D F ADVRL FSN YNPP ++V MA L+ FE+R+
Sbjct: 63 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 103
>gi|401624564|gb|EJS42620.1| bdf1p [Saccharomyces arboricola H-6]
Length = 695
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C++++ L++ + + + F PVD + +N+P YF +K PMDLGTI K+ +Y
Sbjct: 327 MKFCQSIVKELVAKKHASYNYPFLEPVDPVSMNLPTYFEYVKEPMDLGTIAKKLNDWEYQ 386
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 387 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDEYDSDEDLRNQG 446
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + D I E R+
Sbjct: 447 DYDDYESEFSESDIDETIITNPAIQYLEEQLARMKVELQQLKEQELDKIRKERRLARGSK 506
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S K + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 507 KRGKRSKGRSGTKSGSSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 566
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 567 SMPNISEDDEVELDLDTLDNHTILTL 592
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D + +N++ +N P
Sbjct: 182 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQIMEDFNVMVNNSIRFNGP 241
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 242 NAGISQMARNIQASFE 257
>gi|194222248|ref|XP_001916271.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Equus caballus]
Length = 2170
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY AFA
Sbjct: 2071 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPSLEAFA 2128
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2129 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2163
>gi|390605011|gb|EIN14402.1| hypothetical protein PUNSTDRAFT_80735 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1886
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 25/181 (13%)
Query: 155 ESVGGPSVVLAPKGKKRAPNGRNGPQTK------KGNSGRL-----EPKKPAGAASSSNA 203
++ PS+ +APK K G P+ K ++ R P+KP + N
Sbjct: 1155 QAASSPSIPVAPKLKLLPTTGAATPKVKFPGTPLTADASRHGFKVPPPRKPVAPKPTKNG 1214
Query: 204 ML--------------MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDL 249
+K C N+L +L +H+ +F PVD ++ P YF +IK PMDL
Sbjct: 1215 TRYLTKAQASGMSHNDLKACRNMLKKLQTHKRATLFLQPVDPVRDRAPKYFDIIKEPMDL 1274
Query: 250 GTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
T+ K+ +G+YSD AF +D RL +N TYN P A L +F+ +W+ I+K
Sbjct: 1275 STMGAKLEAGKYSDRFAFESDFRLVVNNCKTYNAPSTYPWNEAVALESFFDRQWERIKKT 1334
Query: 310 L 310
L
Sbjct: 1335 L 1335
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 186 SGRLEPKKPAGAASS-SNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIK 244
S + P P +S A+ +K+C +++ L +F PVD + P Y+ I+
Sbjct: 1512 SAPVRPSTPRETSSRPGTAINVKKCRDIIKHLRGMNEAQLFLRPVDPVADGCPTYYDEIQ 1571
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW- 303
+PMDLGT+ ++ G+Y+ F D+ L F N +NPP + AD L+ FE W
Sbjct: 1572 YPMDLGTMLERLDQGRYTTMEQFRDDMTLMFRNCRQFNPPGTYPVVCADILQGVFEKEWN 1631
Query: 304 KAIEKKL 310
KA +KKL
Sbjct: 1632 KAPDKKL 1638
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDP 264
K +N L++L+S +VF PVD + L IP YF VI K DL TI+ K+ + +Y
Sbjct: 1763 KGLQNALSKLVSEDISFVFREPVDPIALGIPSYFKVIPRKDARDLKTIRTKLDADKYPSI 1822
Query: 265 LAFAADVRLTFSNAMTYNPPQNDV 288
A AD+ L SNA+T+N +++V
Sbjct: 1823 EALEADIDLMVSNAVTFNGRESEV 1846
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAF 267
+ ++ ++ + WVF PVD + L IP YF +I K DL TI+ K+ + +Y AF
Sbjct: 1647 QTVMNKIQADDISWVFREPVDPVALGIPTYFDIIPRKDARDLKTIRQKLDADKYDSVEAF 1706
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLR 296
AD+ L NA+ +N P ++V +A LR
Sbjct: 1707 EADIDLMVRNAVKFNGPDSEVGKVAVLLR 1735
>gi|157126758|ref|XP_001654739.1| hypothetical protein AaeL_AAEL002090 [Aedes aegypti]
gi|108882525|gb|EAT46750.1| AAEL002090-PA, partial [Aedes aegypti]
Length = 506
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 7/121 (5%)
Query: 189 LEPKKPAGAAS----SSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFT 241
+ P + +GAA + + M+ C +L L S + + W F PVD L + DY
Sbjct: 301 ISPYQGSGAAQNPPKTKRSFRMRSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHD 360
Query: 242 VIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
+IK PMDLGT+K K+ + +Y FAADVRL F+N YNPP +DV M L+ FE+
Sbjct: 361 IIKKPMDLGTVKRKMDNREYKSANEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEM 420
Query: 302 R 302
R
Sbjct: 421 R 421
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 205 LMKQCENLLTRLMS----HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L Q LL +M HQF W F PVD KLN+PDY +IK PMDLGTIK ++ +
Sbjct: 13 LTNQLHFLLKTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY 72
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
Y D + FSN YN P DV +MA L K F
Sbjct: 73 YWTSKESIQDFNIMFSNCYVYNKPGEDVVVMAQALEKLF 111
>gi|224056313|ref|XP_002187748.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Taeniopygia guttata]
Length = 2125
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +L+ L +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + AF+
Sbjct: 2026 CSMILSELETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIRDKLSSGQYPNLEAFS 2083
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DVRL F N T+N +D+ +RKYFE +W I K
Sbjct: 2084 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIFK 2123
>gi|302813758|ref|XP_002988564.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
gi|300143671|gb|EFJ10360.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
Length = 293
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS---GQYS 262
++ N+L ++ H++ W F PVDV L + DY+ VIK PMD TI+ K+ + Y
Sbjct: 67 LRIFSNILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEAKDGSGYR 126
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
A DVRL FSNAMTYN DV++MA TL + FE ++K +
Sbjct: 127 SVQEIAEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFV 170
>gi|392571704|gb|EIW64876.1| Bromodomain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 749
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 190 EPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHP 246
+P+K ++ A +K CE L L Q + F PVD +K+ IP+Y V+K P
Sbjct: 388 KPRKAKAPRDAATAEQLKFCEKLWKDLHQKQHYTIAHPFYEPVDPVKMGIPEYPKVVKKP 447
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
MDL T+K K+ +G+YS F D RL N MT+NPP N VH L+ FE +WK +
Sbjct: 448 MDLATMKKKLDAGEYSTAEKFREDFRLMVKNCMTFNPPGNPVHEAGKALQVLFEEKWKNL 507
Query: 307 EKKLP 311
P
Sbjct: 508 PSPRP 512
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA------------FAADVR 272
F PVD + L IP Y T+IKHPMD +I+ K+T+ + P AD+R
Sbjct: 223 FLNPVDPVALGIPHYPTIIKHPMDFSSIERKLTTSNPAKPDPNPANPRYGSVDDIVADIR 282
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYFE 300
L F+N +T+N P + V M + F+
Sbjct: 283 LIFANCLTFNGPDHPVTQMGKRVEAVFD 310
>gi|291391605|ref|XP_002712247.1| PREDICTED: bromodomain adjacent to zinc finger domain, 2B
[Oryctolagus cuniculus]
Length = 2168
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2069 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2126
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2127 VDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2161
>gi|440294998|gb|ELP87938.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 364
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 55/90 (61%)
Query: 215 RLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLT 274
+LM+ G FN PVD L IP YF+VIK PMDLGTIK ++ +Y F DV+LT
Sbjct: 94 KLMTQPEGIAFNVPVDPDALQIPTYFSVIKSPMDLGTIKKNLSDKKYLTKEEFYKDVKLT 153
Query: 275 FSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
F+NA +N P +DV+ A L K F+ WK
Sbjct: 154 FNNAKVFNHPDSDVYKWAVKLDKMFDGFWK 183
>gi|431894841|gb|ELK04634.1| Bromodomain adjacent to zinc finger domain protein 2B [Pteropus
alecto]
Length = 2135
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + +FA
Sbjct: 2036 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLESFA 2093
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2094 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2128
>gi|355671954|gb|AER94962.1| bromodomain adjacent to zinc finger domain, 2B [Mustela putorius
furo]
Length = 950
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 852 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 909
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DVRL F N T+N +D+ ++RKYFE +W I K
Sbjct: 910 VDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKWTDIFK 949
>gi|395334726|gb|EJF67102.1| hypothetical protein DICSQDRAFT_158655 [Dichomitus squalens LYAD-421
SS1]
Length = 1880
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 59/105 (56%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
++ C L +L +H+ VF PVD ++ P+YF +IK PMDL T+ K+ GQY D
Sbjct: 1247 LRACRTALKKLQTHKKAAVFLQPVDPVRDRAPNYFDIIKSPMDLSTMGAKLEQGQYKDRF 1306
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
AF AD RL +NA TYN + VH A L +F+ W I K L
Sbjct: 1307 AFEADFRLMINNAKTYNVAGSFVHAEAVALESFFDTTWVRINKTL 1351
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 193 KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
KP A + + + K+C ++L L +F PVD + P Y+ IK PMD GT+
Sbjct: 1627 KPKKAPTQATPLNEKKCRDILRLLAKQPEAPIFMRPVDPVADGCPTYYDEIKEPMDFGTM 1686
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKLP 311
K+ G+Y+ FA DV L F+N T+NPP AD L K F+ W K EKKLP
Sbjct: 1687 HTKLAEGKYATMEDFAKDVGLVFNNCRTFNPPTTYPVNCADALEKLFKKEWAKPAEKKLP 1746
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDP 264
KQ ++ RL+ WVF PVD + L IP YF VI K DL TI K+ ++
Sbjct: 1751 KQLVAMMKRLIDEPISWVFRDPVDPVALGIPTYFDVIPRKDARDLRTILSKLNQEKFESI 1810
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
A AD+ L NA+ +N ++V MA L+ +
Sbjct: 1811 DALEADLDLMIKNAILFNGEDSEVGDMAVKLQNRY 1845
>gi|412993064|emb|CCO16597.1| bromodomain containing 2 [Bathycoccus prasinos]
Length = 1076
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT-SGQYS 262
++ +QC + ++MSH +G F PVD + L + +Y T+I +PMDLGTIK I G+Y
Sbjct: 502 VVHRQCLAAVRQVMSHDWGGPFRMPVDAVALGLANYHTIITNPMDLGTIKKFIEDGGKYE 561
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
DV LTF+NAM +N DVH+MA TL + +++ I
Sbjct: 562 LAKEVHEDVELTFNNAMKFNAEGTDVHVMAKTLLALWHTKYEGI 605
>gi|448081188|ref|XP_004194827.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359376249|emb|CCE86831.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 645
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C L L S + + + F TPVD + LNIP+Y +IK PMDL T++ K+ + QY
Sbjct: 320 LRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQYE 379
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F DVRL F N T+NP DV++M L F+ +W
Sbjct: 380 NGDEFERDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 420
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KLN+P Y+ IK PMDL TI+ K+ Y DP D L SN + +N
Sbjct: 176 FLHPVDTVKLNVPFYYNYIKRPMDLSTIERKLAVNAYEDPSQVVDDFNLMVSNCIKFNGE 235
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA + +FE
Sbjct: 236 NSGISKMAKNTQAHFE 251
>gi|392885383|ref|NP_491384.3| Protein BET-1, isoform a [Caenorhabditis elegans]
gi|351060603|emb|CCD68309.1| Protein BET-1, isoform a [Caenorhabditis elegans]
Length = 853
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C LL + +F W FN PVD +L + DY +IK PMDL ++K K+ SG Y
Sbjct: 263 MKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYK 322
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+P F DVRL N YNP + VH ++ F+ RW
Sbjct: 323 EPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQEVFDRRW 363
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 219 HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNA 278
H+ W F PVD + L IP Y + PMDL TI+ ++ S Y+ D+ F N
Sbjct: 58 HKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDIETVFQNC 117
Query: 279 MTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
T+N ++DV IMA + EV K++E+
Sbjct: 118 YTFNGKEDDVTIMAQNVH---EVIKKSLEQ 144
>gi|300175329|emb|CBK20640.2| unnamed protein product [Blastocystis hominis]
Length = 249
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 65/104 (62%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+ C L ++ S++F F PVD + LNIPDYF +IK+PMD GTI ++ +GQ +
Sbjct: 96 LHLCYRLHMKMQSNKFASPFLHPVDPVALNIPDYFDIIKNPMDFGTIYQRLINGQITTEA 155
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
+ + L F+NA+TYN PQ+DV MA L+ YF+ + ++++
Sbjct: 156 EYVKLMELVFTNAITYNKPQDDVAFMAHELQAYFDKEYTQMKRQ 199
>gi|328863827|gb|EGG12926.1| hypothetical protein MELLADRAFT_46486 [Melampsora larici-populina
98AG31]
Length = 339
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 206 MKQCENLL---TRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L + +F W F PVD +KL +P+Y T+IK PMDL TIK K+ G+Y
Sbjct: 89 LKFCKEVLREVNKKAYEKFVWPFYEPVDPVKLGVPEYLTIIKKPMDLSTIKQKLDRGEYK 148
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
AFAAD RL +N T+NP V+ L FE +W
Sbjct: 149 AGAAFAADFRLMLNNCFTFNPVGTPVYNFGKQLECLFEQKW 189
>gi|448085671|ref|XP_004195918.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359377340|emb|CCE85723.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 637
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C L L S + + + F TPVD + LNIP+Y +IK PMDL T++ K+ + QY
Sbjct: 312 LRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQYE 371
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F DVRL F N T+NP DV++M L F+ +W
Sbjct: 372 NGDEFEHDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 412
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KLN+P Y+ IK PMDL TI+ KI Y DP D L SN + +N
Sbjct: 168 FLHPVDTVKLNVPLYYNYIKRPMDLSTIERKIAVNAYEDPSQVVDDFNLMVSNCIKFNGE 227
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKKL 310
+ + MA + +FE I K+
Sbjct: 228 NSGISKMAKNTQAHFEKHMLNIPPKV 253
>gi|6683500|dbj|BAA89212.1| bromodomain adjacent to zinc finger domain 2B [Homo sapiens]
Length = 1972
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 1873 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 1930
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 1931 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 1965
>gi|344268059|ref|XP_003405881.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Loxodonta africana]
Length = 2169
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2070 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2127
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2128 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2162
>gi|238882433|gb|EEQ46071.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 709
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 203 AMLMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
A ++ C + LMS + + + F PVD + LNIP+Y ++K PMDLGTI+ K+ +
Sbjct: 363 AAELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANN 422
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+Y + F DVRL F N +NP DV++M L F+ +W
Sbjct: 423 EYENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 466
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 219 HQFGWVFNT---------------PVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
HQ +V NT PVD +KLN+P Y+ I PMDL TI+ KI Y D
Sbjct: 190 HQAKFVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYED 249
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE-VRWKAIEKKLPVTVDMTAVPSR 322
D L N +N + MA ++ FE + K K+LP ++ S
Sbjct: 250 VSQVVDDFNLMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKVPPKELPAGTNVAEATSV 309
Query: 323 A 323
A
Sbjct: 310 A 310
>gi|68478269|ref|XP_716876.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
gi|68478390|ref|XP_716816.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438500|gb|EAK97830.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438562|gb|EAK97891.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
Length = 732
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 203 AMLMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
A ++ C + LMS + + + F PVD + LNIP+Y ++K PMDLGTI+ K+ +
Sbjct: 386 AAELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANN 445
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+Y + F DVRL F N +NP DV++M L F+ +W
Sbjct: 446 EYENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 489
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 219 HQFGWVFNT---------------PVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
HQ +V NT PVD +KLN+P Y+ I PMDL TI+ KI Y D
Sbjct: 213 HQAKFVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYED 272
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE-VRWKAIEKKLPVTVDMTAVPSR 322
D L N +N + MA ++ FE + K K+LP ++ S
Sbjct: 273 VSQVVDDFNLMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKVPPKELPAGTNVAEATSV 332
Query: 323 A 323
A
Sbjct: 333 A 333
>gi|345328058|ref|XP_003431230.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Ornithorhynchus anatinus]
Length = 2128
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2029 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2086
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
DVRL F N T+N +D+ +RKYFE +W I
Sbjct: 2087 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDI 2124
>gi|119631811|gb|EAX11406.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_c [Homo
sapiens]
Length = 2231
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2104 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2161
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRA 323
DVRL F N T+N +D+ +RKYFE +W K L + A P A
Sbjct: 2162 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKPLCYEDALAAQPYGA 2216
>gi|440898818|gb|ELR50241.1| Bromodomain adjacent to zinc finger domain protein 2B [Bos grunniens
mutus]
Length = 2166
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2067 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2124
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2125 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2159
>gi|326936108|ref|XP_003214100.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 601
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 49 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 104
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y D F+N YN P +D+ +MA TL K F
Sbjct: 105 TIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 153
>gi|329664076|ref|NP_001192347.1| bromodomain adjacent to zinc finger domain protein 2B [Bos taurus]
gi|296490606|tpg|DAA32719.1| TPA: bromodomain adjacent to zinc finger domain, 2B [Bos taurus]
Length = 2167
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2068 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2125
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2126 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2160
>gi|440302274|gb|ELP94596.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 307
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 55/93 (59%)
Query: 208 QCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
+C+ L+ L + VF PVD ++ NIP Y +IK PMD+GT+K K+ Y F
Sbjct: 52 RCQRLINDLEKTEGCEVFMEPVDPIQWNIPQYSEIIKTPMDIGTVKVKLHKNFYPSREDF 111
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
ADVRLTF NAMT+NPP N +H A L FE
Sbjct: 112 VADVRLTFQNAMTFNPPDNPIHKNAKFLLAMFE 144
>gi|402888433|ref|XP_003907566.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Papio anubis]
Length = 2131
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2032 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2089
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2090 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2124
>gi|426221047|ref|XP_004004723.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Ovis aries]
Length = 2167
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2068 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2125
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2126 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2160
>gi|392597793|gb|EIW87115.1| TATA-binding protein associated factor Taf2 [Coniophora puteana
RWD-64-598 SS2]
Length = 1830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
++ C N L +L H+ +F PVD ++ + P+Y+ VIK+PMDL T+ K+ +G+Y D
Sbjct: 1233 LRACRNALKKLNVHKNCPIFMQPVDPVRDHAPNYYNVIKNPMDLSTMNAKVENGKYKDRF 1292
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
AF +D RL SNA YNP H A L +FE W I K L
Sbjct: 1293 AFESDFRLMISNAKRYNPAGTYAHTEALGLEAFFEKLWTRINKTL 1337
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+C + L L+ +F PVD ++ P Y+ I+HPMD GT+ K++ GQYS
Sbjct: 1592 KKCRDTLKALLKLPESLIFAQPVDPVRDGCPTYYEEIEHPMDFGTMSTKLSKGQYSTMEE 1651
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
FA D L F N +NPP AD + K F W KA+EKK+
Sbjct: 1652 FAKDAGLVFDNCRQFNPPTTYPVNCADLVEKVFRKEWSKAVEKKM 1696
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDP 264
+ + L+T+++ WVF PVD + L IP YF VI K DL TI+ K+ + +Y
Sbjct: 1702 RSLQGLMTQVVKEDISWVFREPVDPVLLGIPTYFEVIPRKDARDLRTIRHKLDADKYDSI 1761
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
AF AD+ L NA+T+N ++V +A L
Sbjct: 1762 EAFEADIDLMIRNAITFNGVDSEVGKLAGAL 1792
>gi|114108122|gb|AAI23311.1| LOC398944 protein [Xenopus laevis]
Length = 465
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 181 TKKGNSGRLEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNI 236
++ +S + P P L Q + L L L HQF W F PVD +KLN+
Sbjct: 5 SRHPHSSIVNPPPPEFINRKKTGRLTNQLQYLEKLVLKSLWRHQFSWPFQQPVDAVKLNL 64
Query: 237 PDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
PDY+ +IK+PMDL TI+ ++ YS L D F+N YN P +D+ +MA L
Sbjct: 65 PDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVLMAQELE 124
Query: 297 KYF 299
K F
Sbjct: 125 KAF 127
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C N+L +MS ++ W F DV+ ++ DY +KHPMDLGTI+ K+ +G Y
Sbjct: 293 LKHCNNILNEMMSKKHAEYAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKMENGLYK 350
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
D FA+DVRL F N YNPP N+V MA L+ FE
Sbjct: 351 DTQDFASDVRLMFMNCYKYNPPDNEVVNMARKLQDVFE 388
>gi|345328056|ref|XP_001512551.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Ornithorhynchus anatinus]
Length = 2183
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2084 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2141
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
DVRL F N T+N +D+ +RKYFE +W I
Sbjct: 2142 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDI 2179
>gi|297264141|ref|XP_002808049.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B-like [Macaca mulatta]
Length = 2188
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2061 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2118
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRA 323
DVRL F N T+N +D+ +RKYFE +W K L + A P A
Sbjct: 2119 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKPLCYEDALAAKPYGA 2173
>gi|401840059|gb|EJT42981.1| BDF1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 695
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+N+L L++ + + + F PVD + +N+P YF +K PMDLGTI K+ +Y
Sbjct: 327 MKFCQNILKELVAKRHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWEYQ 386
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N +NP V++M L + F +W
Sbjct: 387 TMEDFERDVRLVFKNCYKFNPDGTIVNMMGHRLEEVFNSKWADRPNLDEYDSDEDSRNQG 446
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 447 DYEDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 506
Query: 339 KK----------KKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKE 388
K+ K S + K ++ V+T + KRI++ + L E ID +K+
Sbjct: 507 KRGKRSKGRSGSKSASSHGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 566
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 567 SMPNISEDDEVELDLDTLDNHTILTL 592
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF +K PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 182 FLQPVDPVKLDIPFYFNYVKRPMDLSTIERKLNVGAYEFPEQITEDFNLMVNNSIRFNGP 241
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKK--LPVTVDMTAVPSRADDMI---ETETRMGMP--- 336
+ MA ++ FE + K PV ++ D I +T G P
Sbjct: 242 NAGISQMARNIQASFEKHMLNMPAKDAAPVVAKGRRSSAQEDAPIVIRRAQTHNGRPKRT 301
Query: 337 --PMKKKKVSPKETK 349
P K K + P E+K
Sbjct: 302 IHPPKSKDIYPYESK 316
>gi|395846680|ref|XP_003796028.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Otolemur garnettii]
Length = 2146
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2047 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2104
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2105 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2139
>gi|354544706|emb|CCE41432.1| hypothetical protein CPAR2_304210 [Candida parapsilosis]
Length = 748
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C + LMS + + + F PVD + LN+P+Y ++K PMDLGTI+ K+T+ Y
Sbjct: 389 LRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHDIVKEPMDLGTIQSKLTNNLYE 448
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP 311
+ F DVRL F N +NP DV++M L F+ +W + K +P
Sbjct: 449 NADDFEKDVRLVFRNCYAFNPEGTDVNMMGHRLEAIFDKKW--VNKPVP 495
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KLN+P Y+ I PMDL TI+ KI + Y D D L N +N
Sbjct: 232 FLAPVDTVKLNVPFYYNYIPRPMDLSTIERKINANAYEDIAQVVDDFNLMVENCKKFNGE 291
Query: 285 QNDVHIMADTLRKYFEVRWKAI-EKKLPVTV 314
+ MA ++ +FE + K+LP V
Sbjct: 292 AAGISKMATNIQAHFEKHMLNVPPKELPAVV 322
>gi|296195054|ref|XP_002745280.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 667
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P + + ++ C+ +L L+S + W F PVD ++ VIKHPMD
Sbjct: 276 PHAGTKGTRSEHLRGCDRILRDLLSKNHAAYAWPFYQPVD-------NHLDVIKHPMDPS 328
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
T+K K+ GQ+ D FAADVRL FSN YNPP ++V MA L+ FE+R
Sbjct: 329 TVKRKMDGGQHPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQAVFEMR 380
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
++ +++ L +HQ W F PVD +KLN+PDY +IK+PMD+GTIK ++
Sbjct: 75 LQYMRSVVKTLWTHQSAWPFCRPVDAIKLNLPDYHKIIKNPMDMGTIKKRL 125
>gi|219117946|ref|XP_002179758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408811|gb|EEC48744.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 2426
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
M+ +C ++ L+ QFGWVF+ VD + L +PDYF V+KHPM L +K K+ + Y D
Sbjct: 1246 MVTYKCLPVIQELIDDQFGWVFHDAVDPIALGLPDYFDVVKHPMHLELVKKKLENAIYCD 1305
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
+FA DV L F NA+ YN ++V +A++ F V++ I +KL
Sbjct: 1306 TDSFAHDVELVFENAILYNGETSEVGELANS----FLVKFAQIYEKL 1348
>gi|94681063|ref|NP_038478.2| bromodomain adjacent to zinc finger domain protein 2B [Homo sapiens]
gi|229462995|sp|Q9UIF8.3|BAZ2B_HUMAN RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=hWALp4
gi|119631809|gb|EAX11404.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631810|gb|EAX11405.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631812|gb|EAX11407.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|162319380|gb|AAI56488.1| Bromodomain adjacent to zinc finger domain, 2B [synthetic construct]
Length = 2168
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2069 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2126
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2127 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2161
>gi|38014413|gb|AAH60452.1| LOC398944 protein, partial [Xenopus laevis]
Length = 466
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 181 TKKGNSGRLEPKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNI 236
++ +S + P P L Q + L L L HQF W F PVD +KLN+
Sbjct: 5 SRHPHSSIVNPPPPEFINRKKTGRLTNQLQYLEKLVLKSLWRHQFSWPFQQPVDAVKLNL 64
Query: 237 PDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
PDY+ +IK+PMDL TI+ ++ YS L D F+N YN P +D+ +MA L
Sbjct: 65 PDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVLMAQELE 124
Query: 297 KYF 299
K F
Sbjct: 125 KAF 127
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C N+L +MS ++ W F DV+ ++ DY +KHPMDLGTI+ K+ +G Y
Sbjct: 293 LKHCNNILNEMMSKKHAEYAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKMENGLYK 350
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
D FA+DVRL F N YNPP N+V MA L+ FE
Sbjct: 351 DTQDFASDVRLMFMNCYKYNPPDNEVVNMARKLQDVFE 388
>gi|29421196|dbj|BAA96000.2| KIAA1476 protein [Homo sapiens]
Length = 2142
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2043 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2100
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2101 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2135
>gi|390464478|ref|XP_002806959.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Callithrix jacchus]
Length = 2178
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2079 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2136
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2137 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2171
>gi|332234004|ref|XP_003266198.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Nomascus leucogenys]
Length = 2167
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2068 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2125
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2126 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2160
>gi|444524033|gb|ELV13688.1| Epoxide hydrolase 3 [Tupaia chinensis]
Length = 941
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 252 IKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI--EKK 309
+K K+ + +Y D F ADVRL FSN YNPP ++V MA L+ FE+R+ + E +
Sbjct: 205 VKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPE 264
Query: 310 LPVT-VDMTAVP 320
PV V AVP
Sbjct: 265 EPVVAVSSPAVP 276
>gi|407917747|gb|EKG11050.1| hypothetical protein MPH_11793 [Macrophomina phaseolina MS6]
Length = 897
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 51/264 (19%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K E ++ +M + F + F PVD + LNIP Y +IK PMDLGT++ ++ G+Y+
Sbjct: 541 LKFVETVINEMMKPKYRDFSYPFLQPVDPVALNIPQYLKIIKKPMDLGTVQSRLKHGEYT 600
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDV----HIMADTLRKYFEVRWKAIEKKLPVTVDMTA 318
AD+ L F+N +NP +DV H++ D R+ +E + + +E+ P + +A
Sbjct: 601 SAKDAKADLDLIFANCYKFNPEGDDVNKMGHMLEDVYRRAWEKKAEWMEEHAPASEPASA 660
Query: 319 VPSRADD----------------------MIETETRMGM-------PPMKKKKVSPKE-- 347
D+ M+ T+ ++ + P + KK S KE
Sbjct: 661 SEDEDDEESEDEDDEEEIRRRQAQIAEQIMMLTQEQLALQAKKGKSPKVVGKKTSKKEKT 720
Query: 348 -TKIK-----AEPVR-----RVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGETG- 395
TK K A PV+ R +T EEKR++S + L E + ++ G
Sbjct: 721 QTKSKKLSKPAAPVKPKKKLRQITFEEKRLISETISNLDEHQMAKAVQIIRNGVPSLQGV 780
Query: 396 -EDELEIDIDALSDDTLFALRKLL 418
+DELE+DID + ++ L L K +
Sbjct: 781 NDDELELDIDTIPNEVLHDLLKYI 804
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 201 SNAMLMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT 257
S M Q + L+ RL + F PVD + LNIP Y VI +PMDL T++ K
Sbjct: 336 SQPMTSAQHKFLMDRLRGAKKTKPAAAFLHPVDPVALNIPHYPQVITNPMDLSTLEAKHK 395
Query: 258 SGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
QY AF +D L N + +N Q+ + A L+ +FE
Sbjct: 396 EKQYQSVDAFMSDFYLMIDNCVLFNGIQHPIAQSAWNLQMWFE 438
>gi|403258938|ref|XP_003921998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Saimiri boliviensis boliviensis]
Length = 2170
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2071 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2128
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2129 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2163
>gi|32564850|ref|NP_871879.1| Protein BET-1, isoform b [Caenorhabditis elegans]
gi|351060598|emb|CCD68304.1| Protein BET-1, isoform b [Caenorhabditis elegans]
Length = 765
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C LL + +F W FN PVD +L + DY +IK PMDL ++K K+ SG Y
Sbjct: 263 MKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYK 322
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+P F DVRL N YNP + VH ++ F+ RW
Sbjct: 323 EPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQEVFDRRW 363
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 219 HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNA 278
H+ W F PVD + L IP Y + PMDL TI+ ++ S Y+ D+ F N
Sbjct: 58 HKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDIETVFQNC 117
Query: 279 MTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
T+N ++DV IMA + EV K++E+
Sbjct: 118 YTFNGKEDDVTIMAQNVH---EVIKKSLEQ 144
>gi|344245482|gb|EGW01586.1| Bromodomain adjacent to zinc finger domain protein 2B [Cricetulus
griseus]
Length = 1853
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+ +GQY++ FA
Sbjct: 1754 CSVILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLNNGQYTNFETFA 1811
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 1812 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 1846
>gi|426337492|ref|XP_004032738.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Gorilla gorilla gorilla]
Length = 2090
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 1991 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2048
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2049 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2083
>gi|242058181|ref|XP_002458236.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
gi|241930211|gb|EES03356.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
Length = 225
Score = 89.0 bits (219), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTY 281
GWVF+ PVD L + DY+TV+ PMDLGT+ ++ +Y P AFA DVRLTF NAM+Y
Sbjct: 76 GWVFDAPVDARALGLRDYYTVVADPMDLGTVLRRLERRRYVYPTAFADDVRLTFRNAMSY 135
Query: 282 NPPQNDVHIMADTLRKYFEVRWKAIEKKLP 311
N + V+ A L FE RW +IE +LP
Sbjct: 136 NDEGDPVYESAAELSGIFEARWASIEAELP 165
>gi|390352956|ref|XP_003728006.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C ++ LMS + + W F PVD + DY +IK PMD+GTIK K+ + Y
Sbjct: 422 LKFCYGVIKELMSKKHSVYAWPFFKPVDADVFGLHDYHEIIKTPMDMGTIKVKLENRDYK 481
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
+ FAADVRL F N YNP NDV MA L FEV++ I
Sbjct: 482 NANDFAADVRLIFRNCYKYNPRDNDVVKMARKLENVFEVKFAKI 525
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F+ PVD KL +PDY+ +IK PMDLGTIK ++ S Y +D
Sbjct: 209 VLKALWKHQFAWPFHHPVDPTKLALPDYYKIIKTPMDLGTIKKRLESIYYHSAKECISDF 268
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+L F+N ++ P DV +MA L K F
Sbjct: 269 KLVFTNCYLHDKPGEDVVLMAQALEKLF 296
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%)
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DY +IK PMDLGTIK ++ S Y +D L F+N +N P DV MA L K
Sbjct: 1 DYLKIIKTPMDLGTIKKRLESIYYHSAKECISDFNLVFTNCYLHNKPGEDVVFMAQALEK 60
Query: 298 YF 299
F
Sbjct: 61 LF 62
>gi|395732421|ref|XP_002812584.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Pongo abelii]
Length = 2004
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 1905 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 1962
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 1963 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 1997
>gi|440789954|gb|ELR11245.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 119
Score = 89.0 bits (219), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LLT L H++ W F PVD + L +PDY +I+ PMDL TI+ K+ +G Y AF DV
Sbjct: 9 LLTNLARHRYAWPFAHPVDYVALGVPDYPMIIQRPMDLATIRDKLEAGTYELVSAFLDDV 68
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRK 297
+L +SNA YNPP +DV IMAD + +
Sbjct: 69 QLVWSNAKVYNPPGSDVVIMADAMEQ 94
>gi|449541548|gb|EMD32531.1| hypothetical protein CERSUDRAFT_118583 [Ceriporiopsis subvermispora
B]
Length = 1819
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PK +G S ++ ++ C N L +L +++ VF PVD ++ P+YF +IK PMDL
Sbjct: 1220 PKAQSGGMSLND---LRACRNALKKLQTNKHAPVFLQPVDPVRDRAPNYFDIIKKPMDLS 1276
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
TI K+ SGQY D F +D+ L +NA TYN + VH A L +FE +W I K L
Sbjct: 1277 TISAKLESGQYKDRFEFRSDLHLMINNAKTYNMAGSFVHEQALALESFFEKQWVRISKTL 1336
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+C ++L L +F PVD + P Y+ IK PMD T+ K T G Y+
Sbjct: 1584 KKCRDILKTLTRVLEAAIFLRPVDPVLDGCPTYYDEIKEPMDFATMGNKFTEGAYTTMED 1643
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
FA DV L F+N T+NPP ADT+ + ++ W KA+EKKL
Sbjct: 1644 FAKDVELVFANCRTFNPPGTYPVQCADTVERVWKREWQKAMEKKL 1688
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDP 264
+ + L+T+L+ WVF PVD + L IP YF VI K DL TI+ K+ + +Y
Sbjct: 1694 RSLQGLMTKLVVDPVSWVFREPVDPVLLGIPTYFDVIPKKDARDLRTIRNKLDADKYESI 1753
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
AF AD+ L +NA+ +N ++V A +R +
Sbjct: 1754 EAFEADMDLMINNAIRFNGADSEVGQAAVVMRHKY 1788
>gi|254566451|ref|XP_002490336.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|238030132|emb|CAY68055.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|328350730|emb|CCA37130.1| Bromodomain-containing factor 1 [Komagataella pastoris CBS 7435]
Length = 640
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 38/251 (15%)
Query: 206 MKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C ++ LMS HQ + + F PVD + L+ P YF ++K PMDLGTI+ K+ + +Y
Sbjct: 294 LRFCNQVMKELMSKKHQNYSFPFLQPVDPVALDCPTYFDIVKEPMDLGTIQAKLANSEYE 353
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
+ F +VRL F+N +NP + V++M T+ F W+ P ++ S
Sbjct: 354 NADQFEREVRLVFTNCYKFNPEGSPVNVMGHTMENVFNKEWEKKPAPAPSPQVLSDYDSE 413
Query: 323 ADDM--IET-ETRMGMPPMKKKKVSPKETKIKAEPVRRVM-------------------- 359
A+D IE E+ + P ++ + + + E ++R +
Sbjct: 414 AEDEGDIEIDESLLTNPAIEYLETQIERMRADVEKMKRQLYDEVMSVAIKNRKKSKRSKK 473
Query: 360 ----------TNEEKRILSTELEALLEELPESIIDFLKEH--SAGETGEDELEIDIDALS 407
T E K+ LS ++ L E +I ++E ++G++E+E+DID L
Sbjct: 474 KSSISYPTHITYEMKKELSEKINYLSETKLAKVISIIQETLPELQKSGQEEIELDIDQLD 533
Query: 408 DDTLFALRKLL 418
TL L +
Sbjct: 534 SATLLKLYNFV 544
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD KL IP Y+ IK PMDL TI+ KI+ Y P D L N +N
Sbjct: 152 FLLPVDTEKLGIPLYYNYIKRPMDLSTIERKISVSAYESPDIIVEDFNLMVDNCRKFNGE 211
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 212 DTPITRMAKNIQASFE 227
>gi|395519612|ref|XP_003763937.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B,
partial [Sarcophilus harrisii]
Length = 1045
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQYS+ FA
Sbjct: 946 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYSNLETFA 1003
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 1004 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 1038
>gi|351711943|gb|EHB14862.1| Bromodomain adjacent to zinc finger domain protein 2B [Heterocephalus
glaber]
Length = 2168
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+++GQY + FA
Sbjct: 2069 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSNGQYPNLETFA 2126
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2127 VDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2161
>gi|354476573|ref|XP_003500499.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Cricetulus griseus]
Length = 2117
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+ +GQY++ FA
Sbjct: 2018 CSVILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLNNGQYTNFETFA 2075
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2076 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2110
>gi|50303459|ref|XP_451671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640803|emb|CAH02064.1| KLLA0B03113p [Kluyveromyces lactis]
Length = 661
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 170 KRAPN--GRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWV 224
+RAP+ GR + + + P + S + M MK C+ +L L+S + F +
Sbjct: 244 RRAPSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYP 303
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LN P YF +K PMDLGT++ K+ + +Y F DVRL F N +NP
Sbjct: 304 FLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPE 363
Query: 285 QNDVHIMADTLRKYFEVRW 303
V++M L F +W
Sbjct: 364 GTIVNMMGHRLEDVFNSKW 382
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F+ PVD + LNIP YF I PMDL TI+ K+ Y P D L SN + +N
Sbjct: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA ++ FE
Sbjct: 199 KAVISQMARNIQASFE 214
>gi|448531883|ref|XP_003870352.1| Bdf1 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354706|emb|CCG24222.1| Bdf1 transcription factor [Candida orthopsilosis]
Length = 730
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C + LMS + + + F PVD + LN+P+Y ++K PMDLGTI+ K+T+ Y
Sbjct: 379 LRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHEIVKEPMDLGTIQSKLTNNLYE 438
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLP 311
+ F D+RL F N +NP DV++M L F+ +W + K +P
Sbjct: 439 NADEFEKDIRLMFRNCYAFNPEGTDVNMMGHRLEAIFDKKW--VNKPVP 485
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KLN+P Y+ I PMDL TI+ KI + Y + D L N +N
Sbjct: 225 FLAPVDTVKLNVPFYYNYIPRPMDLLTIERKINANAYEEISQVVDDFNLMVDNCKKFNGE 284
Query: 285 QNDVHIMADTLRKYFEVRWKAI-EKKLPVTVDMTAVPSRADDMIETETR 332
+ MA ++ +FE + K+LP V S A+D T R
Sbjct: 285 AAGISKMATNIQAHFEKHMLNVPPKELPAGVSAPKSKSGANDAAITSRR 333
>gi|302848828|ref|XP_002955945.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
gi|300258671|gb|EFJ42905.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
Length = 569
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
++ K C L + H++ + FN PVD + PDY +I PMD TIK + G Y D
Sbjct: 85 VVQKHCSTALKSITQHKWAFPFNNPVDTARF--PDYPKIISSPMDFSTIKARQDGGYYRD 142
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKLPVTVDMT----- 317
P + +DV L FSNA YN P +D ++MA TL++ E ++ K I +L +T
Sbjct: 143 PKDWWSDVMLVFSNAKRYNAPGSDCYLMAQTLQEVSEEKYDKVIAPRLAEAEAVTLREEV 202
Query: 318 --------AVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILST 369
V + + ++ + + M + + +E K A + +T EEK+ L+
Sbjct: 203 HLKKKRAELVNQQISEAMDAQCAVLFNLMAELHAAIREAKSLASSLCEPLTLEEKQALAA 262
Query: 370 ELEALLEELPESIIDFL 386
++ L E+I+ F+
Sbjct: 263 TIQGLPTAQLEAIVAFV 279
>gi|403417076|emb|CCM03776.1| predicted protein [Fibroporia radiculosa]
Length = 1900
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PK +G S ++ ++ C N L +L +H+ VF PVD ++ + P+YF VIK+PMDL
Sbjct: 1301 PKAQSGGMSLND---LRACRNALKKLQTHKRAVVFLQPVDPVRDHAPNYFDVIKNPMDLS 1357
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
T+ K+ G+Y+D AF AD + NA YN + VH A L +FE +W I K L
Sbjct: 1358 TMSAKLEQGKYNDRFAFEADFHMIIGNAKLYNLSGSYVHNEALALESFFEKQWVRINKTL 1417
Query: 311 PVTVDMTAVPSRADDMIETETRMGMPPMKKKKVSP 345
A D M +PP++ V P
Sbjct: 1418 -----------EAADRSAQPRVMNIPPVEPTVVRP 1441
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P K + S + ++ K+C +L L +F PVD + P Y+ IK PMD
Sbjct: 1649 PSKAKRSHSQTTSINEKKCREILKVLTKLPDARIFLKPVDPVLDGCPTYYDEIKEPMDFA 1708
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKK 309
T+ K++ G Y+ FA D+ L F N +NPP AD + + F+ W K +EKK
Sbjct: 1709 TMSTKLSEGAYTTMEGFAKDIELIFGNCRKFNPPTTYPVTCADGVERIFKKEWSKLMEKK 1768
Query: 310 L 310
L
Sbjct: 1769 L 1769
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDP 264
+ ++++TRL++ +VF PVD + L IP YF VI K DL TI+ K+ + +Y
Sbjct: 1775 RSLQSVMTRLVTDPISFVFREPVDPIALGIPTYFDVIPRKDARDLRTIRQKLDADKYDST 1834
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
A+ AD+ L NA+ +N ++V +A +R ++
Sbjct: 1835 EAWEADMELMIDNAIHFNGADSEVGQIAMLVRNRYK 1870
>gi|301608560|ref|XP_002933843.1| PREDICTED: bromodomain-containing protein 3 [Xenopus (Silurana)
tropicalis]
Length = 1013
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD KLN+PDY+ +IK+PMDL TI+ ++ YS L D
Sbjct: 40 VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +M+ L K F
Sbjct: 100 NTMFTNCYIYNKPGDDIVVMSQELEKVF 127
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C N+L +MS ++ W F V+ ++ D IKHPMDL TI+ K+ +G Y
Sbjct: 294 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 351
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FA+DVRL F N+ YNPP N+V MA ++ FE + I
Sbjct: 352 DTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKI 395
>gi|355750561|gb|EHH54888.1| hypothetical protein EGM_03990 [Macaca fascicularis]
Length = 2371
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 2267 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 2324
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
DVRL F N T+N +D+ +RKYFE +W K L
Sbjct: 2325 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKPL 2366
>gi|189198604|ref|XP_001935639.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982738|gb|EDU48226.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 851
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 206 MKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE++LT LM ++ V F TPVD + LNIP Y +IK PMD GTI+ + +G Y
Sbjct: 488 LKFCESVLTELMKPKYSAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 547
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
F AD +L F N +NP + V+ M L FE WK
Sbjct: 548 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLWK 589
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 198 ASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
A + M Q + LL R+ + + F PVD + L IP Y ++KHPMDL T++
Sbjct: 274 AWPTTPMTEAQNKFLLERIRNTKKIKVSLAFKDPVDPVALGIPQYPEIVKHPMDLSTMES 333
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K+ +Y+ F AD+ +N+ +N Q+ V LR YF
Sbjct: 334 KLKEKKYTYVRDFMADLDQMITNSELFNNKQHPVTQAGYNLRAYF 378
>gi|402222601|gb|EJU02667.1| hypothetical protein DACRYDRAFT_21692 [Dacryopinax sp. DJM-731 SS1]
Length = 1785
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+K C L RL ++ +F PVD ++ P+YF VIK+PMDL I K+ G+Y D
Sbjct: 1205 LKACRQALKRLNMNKHADLFRMPVDPIRDRAPNYFDVIKNPMDLSNISAKLEDGRYGDRF 1264
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
AF D RL NA TYNP H A+ L+++F+ +W I K L
Sbjct: 1265 AFEQDFRLMIQNAHTYNPLGTYAHTEANKLQEFFDKQWARISKTL 1309
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+C ++ + + ++F PVD + P Y+ IK+PMD GT++ K+T G+Y A
Sbjct: 1540 KKCRAVMKIVKALPQAYIFLRPVDPIADGCPTYYDEIKNPMDFGTMENKLTEGRYDTMSA 1599
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
FAAD L N T+NPP D IMAD + K F+ W K + KKL
Sbjct: 1600 FAADFDLVIGNCRTFNPPGTDASIMADIVDKAFKKEWSKVLVKKL 1644
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDP 264
+ + + +L +VF PVD + L IP YF VI K DL TIK K+ +Y
Sbjct: 1650 RSLQTAINKLRQMPSAFVFLDPVDPVALGIPTYFDVIPKKDARDLSTIKTKLDQDKYDSI 1709
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
A AD+RL NA+ +N +++V A + K + V
Sbjct: 1710 EALDADIRLMVDNAIKFNGAESEVAAAARQVDKDYNV 1746
>gi|406862248|gb|EKD15299.1| transcription regulator [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 912
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE +L + QF +F PVD + LNIP YFT+IK PMDL T+ K+ SG Y
Sbjct: 532 LKFCEMVLEEVRKDRYAQFNHIFQFPVDPVALNIPTYFTIIKKPMDLSTMSNKLKSGSYG 591
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
+ F D+RL +N +NPP N V+ + + F +W+
Sbjct: 592 NASEFEKDMRLMLANCYKFNPPPNMVNELGKRFEELFNKQWE 633
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNI-PDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++Q L ++ G F PV + +I +Y + I P+DL T+ K+TSG Y
Sbjct: 328 VQQLSQALKSACKNRNGLNFRGPVVELWPDIKTNYLSRISKPIDLKTMDHKLTSGVYRFM 387
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
F +D+ L ++N +T+N +DV A +R
Sbjct: 388 EEFTSDLHLLYNNTLTFNGQFHDVSKAAFVIR 419
>gi|50413693|ref|XP_457302.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
gi|49652967|emb|CAG85306.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
Length = 639
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C + L+S + + + F PVD + LNIP+Y V+K PMDLGTI+ K+ + QY
Sbjct: 314 LRFCNQTVKELISKKHYNYNFPFLAPVDTVALNIPNYAEVVKEPMDLGTIQTKLANNQYE 373
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F DVRL F N +NP DV++M L F+ +W
Sbjct: 374 NGDEFERDVRLVFKNCYAFNPEGTDVNMMGHRLESIFDKKW 414
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD++KLNIP Y+ I PMDL TI+ KI + Y +P D L +N +N
Sbjct: 169 FVHPVDIVKLNIPFYYNYIPRPMDLSTIERKINANAYEEPSRIVEDFNLMVANCCKFNGE 228
Query: 285 QNDVHIMADTLRKYFE 300
Q+ + MA ++ +FE
Sbjct: 229 QSGISKMAKNVQAHFE 244
>gi|10441758|gb|AAG17179.1|AF191032_1 RING3, partial [Myxine glutinosa]
Length = 732
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
L P KP G ++ L K +L + HQF W F+ PVD KLN+PDY+ +IK+P+D
Sbjct: 23 LNPNKP-GRLTNQLQFLQKVVMKVLWK---HQFAWPFHHPVDAAKLNLPDYYQIIKNPLD 78
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ TIK ++ S Y + D F+N YN P +D+ +MA T+ K F
Sbjct: 79 MLTIKKRLESNYYWTAVECIQDFSTMFTNCYIYNRPNDDIVLMAQTVEKAF 129
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+ +L + + + + W F VD L + DY +IK PMDL TIK K +Y+
Sbjct: 410 LRHCQTILKEIFTKKHAAYAWPFYKAVDAFALGLHDYHDIIKIPMDLTTIKEKFERREYT 469
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
+ FA D+RL FSN YNPP ++V MA L+ FE+R+ +
Sbjct: 470 NLHEFADDMRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKV 513
>gi|401827500|ref|XP_003887842.1| chromatin remodeling bromodomain-containing transcription factor
[Encephalitozoon hellem ATCC 50504]
gi|392998849|gb|AFM98861.1| chromatin remodeling bromodomain-containing transcription factor
[Encephalitozoon hellem ATCC 50504]
Length = 370
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+K C +LTR+ + F PVD +KL IPDY IKHPMDL TI+ K+ + +YS P
Sbjct: 17 LKYCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDAKEYSGPE 76
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F +D++L F+N TYNPP VH M L +
Sbjct: 77 GFDSDMKLMFNNCYTYNPPGTVVHDMGKALESVY 110
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 23/225 (10%)
Query: 193 KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
KP + + + N L R + W F PVD +P Y++VIK PMD+ T+
Sbjct: 144 KPIEVMKTEDYEFCSEVLNDLVRPKHKAYNWPFLEPVD--GDLVPGYYSVIKEPMDMQTM 201
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA-IEKKLP 311
+ K+ +Y F D+ L N +N P +V+ FE KA +EK LP
Sbjct: 202 RNKLEQRKYHSVEEFGRDLELIVENCKKFNAPGTEVYACGQE----FERAIKAHMEKTLP 257
Query: 312 VTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAE----PVRRVMTNEEKRIL 367
D+ + S + + TR ++ E+K+ + P R + E+ +
Sbjct: 258 --ADIKSRISELKRKVVSYTR---------EIRMLESKLMEQTGEAPSSRAYSLSERVSI 306
Query: 368 STELEALLEELPESIIDFLKEHSAGETGE-DELEIDIDALSDDTL 411
+ + +E E++ + ++ AGE E DE+E+D+ + D +
Sbjct: 307 GNAILNMTKEQTENVAKIVLKNGAGEFVENDEIEVDMRTIPDHVV 351
>gi|195999880|ref|XP_002109808.1| hypothetical protein TRIADDRAFT_20501 [Trichoplax adhaerens]
gi|190587932|gb|EDV27974.1| hypothetical protein TRIADDRAFT_20501, partial [Trichoplax
adhaerens]
Length = 470
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 216 LMSHQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLT 274
L H+ + W F PV+ KL + DY+ +IKHPMDLGT+K K +Y FAADVRL
Sbjct: 164 LKKHRAYAWPFYEPVNAEKLGLTDYYEIIKHPMDLGTVKDKFEKLEYKAINEFAADVRLI 223
Query: 275 FSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
F+N YNP +D+ MA L+ FE ++ I
Sbjct: 224 FTNCYKYNPSDHDIVNMARRLQDVFEFKYAQI 255
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 216 LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTF 275
L H++ W F PVD +KL +PDYF +IK PMDLGTIK K+ Y D+ TF
Sbjct: 17 LWKHRYAWPFRQPVDPVKLQLPDYFKIIKKPMDLGTIKRKLEGKMYHSAKECMDDILRTF 76
Query: 276 SNAMTYNPPQNDVHIMADTLRKYFE 300
+N TYN +D+ +M + L K ++
Sbjct: 77 TNCYTYNKTSDDIVLMCEELEKVYK 101
>gi|410348356|gb|JAA40782.1| bromodomain adjacent to zinc finger domain, 2B [Pan troglodytes]
Length = 2176
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++ GQY + FA
Sbjct: 2077 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSGGQYPNLETFA 2134
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2135 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2169
>gi|300121324|emb|CBK21704.2| unnamed protein product [Blastocystis hominis]
Length = 304
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 49/272 (18%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
M C L +LM H++ F PVD + L + DYF V+KHPMD TI +I + +
Sbjct: 1 MALCAKSLKKLMMHKWAGPFLHPVDPVALGLSDYFDVVKHPMDFSTILSQIENHELRSKD 60
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL-----PVTVDMTAVP 320
FA+ V L F NA+ YN +DVHIMA L+ F + I ++ VP
Sbjct: 61 EFASKVNLVFDNALLYNSKGSDVHIMASELQSLFAKEMETITGQIFAAGPDAQAPTYYVP 120
Query: 321 SRAD-----DMIE-----TETRMGMPPMKKKKVSPKE---------TKIKAEPVR----- 356
SR + D+ +E+R +K +++ KE +++ E R
Sbjct: 121 SRRERAPLPDIPPKLPRVSESRPAKSSAEKARLAQKEEMEMMKSRIQQLEGELSRMTQEV 180
Query: 357 -------------RVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGE-TGEDELEID 402
R MT EEK+ LS E+ L E ++ + AGE ++++E+D
Sbjct: 181 NERQGKGEKALDARPMTMEEKKALSMEINQLKGSDLEEVVRIVWGQMAGEQMQQNDIELD 240
Query: 403 IDALSDDTLFALRKLLDDYLLEKQQKQANPGP 434
+ A+ ++T LRK L+ Y++ Q K+A P
Sbjct: 241 LSAMPNET---LRK-LERYIV--QCKEAKKAP 266
>gi|328703281|ref|XP_001944541.2| PREDICTED: hypothetical protein LOC100164694 [Acyrthosiphon pisum]
Length = 1162
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L + + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 343 LKGCTEVLKELFTKKHAAYAWPFYKPVDAAWLGLHDYHDIIKKPMDLGTVKTKLDNREYK 402
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
+ FAADV L FSN YNP +DV MA L+ FE + + P+
Sbjct: 403 NSKDFAADVNLIFSNCYKYNPKDHDVVAMAKKLQAVFEAKMSKVPPDPPL 452
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L HQ W F PVD KLN+PDY VIK PMDLGT+K ++ + Y D+
Sbjct: 80 VMKALWKHQHAWPFYQPVDASKLNLPDYHKVIKTPMDLGTVKKRLENNYYWCADECIQDI 139
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN TYN P DV +MA TL K F
Sbjct: 140 NAMFSNCYTYNKPGEDVVLMAQTLEKIF 167
>gi|397500603|ref|XP_003820998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
paniscus]
Length = 2168
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++ GQY + FA
Sbjct: 2069 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSGGQYPNLETFA 2126
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2127 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2161
>gi|327283518|ref|XP_003226488.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Anolis carolinensis]
Length = 2184
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
LL+ L +H+ W F PV++ ++P Y VIK PMD TI+ K+ SGQY + AFA DV
Sbjct: 2088 LLSELETHEDAWPFLLPVNLK--HVPGYRKVIKKPMDFSTIREKLNSGQYPNLEAFAVDV 2145
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
RL F N T+N +D+ +RK+FE +W I K
Sbjct: 2146 RLVFDNCETFNEDDSDIGRAGHNMRKHFEKKWTEIFK 2182
>gi|66800045|ref|XP_628948.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|74896738|sp|Q54BA2.1|Y3800_DICDI RecName: Full=Ankyrin repeat, bromo and BTB domain-containing
protein DDB_G0293800
gi|60462310|gb|EAL60533.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 806
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C+ L+ + + F PVD + IPDYF VIKHPMDLGTIK K+ + YS FA
Sbjct: 525 CKGLINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFA 584
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
ADVRL F NA+TYN + V A TL F+ ++
Sbjct: 585 ADVRLMFENALTYNADSSPVWKHAKTLLNAFDQKF 619
>gi|323448819|gb|EGB04713.1| hypothetical protein AURANDRAFT_17164, partial [Aureococcus
anophagefferens]
Length = 88
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L +L+ H+ W+F PVD ++LN+PDYF +IK+PMDLG+IK ++ + Y F ADV
Sbjct: 1 VLKKLIDHECSWIFMQPVDPVELNLPDYFEIIKNPMDLGSIKKRMENNGYKLIAEFGADV 60
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
RLTF NA++YN +DV +A ++ F
Sbjct: 61 RLTFDNAISYNGNGSDVCKVARDMKSTF 88
>gi|5262644|emb|CAB45759.1| hypothetical protein [Homo sapiens]
Length = 449
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 350 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 407
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 408 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 442
>gi|403344522|gb|EJY71608.1| Bromodomain-containing protein [Oxytricha trifallax]
Length = 797
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K + L+ L HQ W+F+ PVD +KLNIPDY+ +IK+PMDL +K K+ + +Y+
Sbjct: 692 KAAKRLVNTLWKHQNSWIFHEPVDPIKLNIPDYYDIIKNPMDLSQVKTKLNNNEYTKIND 751
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
F DV+L F N + YN V M ++R F+ ++ +
Sbjct: 752 FLYDVQLIFDNCLLYNGDSTQVSQMCKSVRDEFQKQYHIL 791
>gi|410035848|ref|XP_525949.4| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
troglodytes]
Length = 2198
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++ GQY + FA
Sbjct: 2099 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSGGQYPNLETFA 2156
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 2157 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2191
>gi|62177117|ref|NP_001001182.2| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2123
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+ +GQY + FA
Sbjct: 2024 CSMILTEMETHEDSWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLNNGQYPNFETFA 2081
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2082 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2116
>gi|25152243|ref|NP_509770.2| Protein BET-2, isoform a [Caenorhabditis elegans]
gi|22265870|emb|CAA93473.3| Protein BET-2, isoform a [Caenorhabditis elegans]
Length = 1209
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 LMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
K C LL + S + F VF PVD +KL I DY VI +PMDL TIK K+ QY
Sbjct: 556 WQKFCSKLLNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQY 615
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
++P F D+ L N YNP + H A LR +FE RWK
Sbjct: 616 AEPEEFVHDINLMVDNCCKYNPKGSPAHSNALELRSFFEQRWK 658
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 188 RLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPM 247
R EP PAG + L ++ + H+ W F PVD +KL IP+Y ++ PM
Sbjct: 272 RTEP--PAGKPTRHTNCLDFVLFTVVKDALKHKHSWPFQLPVDAIKLEIPEYHNIVNTPM 329
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DL TI+ ++ + Y D+ F N ++NPP+ DV+ MA TL K
Sbjct: 330 DLRTIEKRLRNLYYWCAEDAIKDINQVFINCYSFNPPEYDVYKMAKTLEK 379
>gi|300701921|ref|XP_002995060.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
gi|239603745|gb|EEQ81389.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
Length = 368
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
MK C +L +L +Q + F PVD +K IPDY IK+PMDL T+K K+ S Y+ P
Sbjct: 13 MKYCGQILQKLKRNQNAFPFLEPVDPIKYGIPDYPLKIKYPMDLSTVKKKLDSKVYNTPE 72
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
F +D++L F+N TYN P +DV+++ L +Y++
Sbjct: 73 MFDSDIKLMFNNCYTYNHPSSDVYLLGKKLEEYYD 107
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 209 CENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
C +L ++ + F W F PVD L P Y+ +IK+PMDL +IK K+ Y
Sbjct: 152 CIEVLNEILKSKYKGFVWPFLEPVDENLL--PQYYEIIKNPMDLKSIKDKLDLKSYKGVD 209
Query: 266 AFAADVRLTFSNAMTYNPPQNDVH 289
F+ D+RL N +N +DV+
Sbjct: 210 EFSNDLRLITENCHKFNDQGSDVY 233
>gi|157823119|ref|NP_001101730.1| bromodomain adjacent to zinc finger domain protein 2B [Rattus
norvegicus]
gi|149047773|gb|EDM00389.1| bromodomain adjacent to zinc finger domain, 2B (predicted) [Rattus
norvegicus]
Length = 2191
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+ +GQY + FA
Sbjct: 2092 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYRKVIKKPMDFSTIREKLNNGQYPNFETFA 2149
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2150 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2184
>gi|223462537|gb|AAI50815.1| Baz2b protein [Mus musculus]
Length = 2158
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+ +GQY + FA
Sbjct: 2059 CSMILTEMETHEDSWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLNNGQYPNFETFA 2116
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2117 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2151
>gi|451856062|gb|EMD69353.1| hypothetical protein COCSADRAFT_166346 [Cochliobolus sativus
ND90Pr]
Length = 912
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 206 MKQCENLLTRLMSHQFG---WVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE+++T LM ++ + F +PVD + LNIP Y +IK PMD GTI+ + +G Y
Sbjct: 545 LKFCESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 604
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
F AD +L F N +NP + V+ M L + FE WK
Sbjct: 605 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEELFESLWK 646
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 208 QCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
Q + LL R+ + + F PVD + LNIP Y+ V+KHPMDL T++ K+ +Y
Sbjct: 342 QSKFLLERIRNTKKIKVSLAFKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKKYKYV 401
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F AD+ +N+ +N Q+ V LR YF
Sbjct: 402 RDFMADLDQMITNSELFNNKQHPVTQAGYNLRAYF 436
>gi|148695007|gb|EDL26954.1| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2193
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+ +GQY + FA
Sbjct: 2094 CSMILTEMETHEDSWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLNNGQYPNFETFA 2151
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2152 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2186
>gi|449550736|gb|EMD41700.1| hypothetical protein CERSUDRAFT_41693 [Ceriporiopsis subvermispora B]
Length = 1399
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 202 NAMLMKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS 258
NA ++ CE +L L Q + F PVD +KL+IP Y ++K PMDL T+K K+T+
Sbjct: 1046 NAEQLRYCEKVLKDLHRKQHYNIAHPFYEPVDWVKLDIPSYPKIVKRPMDLSTMKRKLTN 1105
Query: 259 GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
G YS AF D +L N +T+NP +N VH TL + FE +W +
Sbjct: 1106 GDYSTAQAFYDDFKLMIRNCITFNPAKNPVHEAGVTLDRLFEEKWHQL 1153
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 12/88 (13%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG------------QYSDPLAFAADVR 272
F PVD + LNIP Y ++IK+PMD T++ K+ + +Y F ADVR
Sbjct: 869 FLQPVDPILLNIPHYPSIIKNPMDFSTVERKLQASSPVKPDSNPANPRYYSTDDFVADVR 928
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYFE 300
L F+N++T+N P + V +M + F+
Sbjct: 929 LIFTNSVTFNGPDHAVTLMGKRVENVFD 956
>gi|426225993|ref|XP_004007141.1| PREDICTED: uncharacterized protein LOC101109872 [Ovis aries]
Length = 589
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
K+ S +Y D FAAD+RL FSN YNPP ++V MA L+ FE+R
Sbjct: 335 KMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMR 382
>gi|429242322|ref|NP_593620.3| bromodomain protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|391358177|sp|Q9HGP4.3|YK82_SCHPO RecName: Full=Bromodomain-containing protein C631.02
gi|347834104|emb|CAC05484.3| bromodomain protein (predicted) [Schizosaccharomyces pombe]
Length = 727
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 160 PSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSH 219
P + APKG R R +SG E +A MK C+++L L+
Sbjct: 350 PRSMTAPKGGART--RRQAAMYSNSSSGIRETMYDLKPHRRKDAAEMKFCQSVLKELLKK 407
Query: 220 Q---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFS 276
Q + + F PV+ PDYF VIKHPMDLGT++ K+ +Y+ AF AD+ L F
Sbjct: 408 QHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFK 467
Query: 277 NAMTYNPPQNDVHIMADTLRKYFEVRW 303
N +N VH+M L F+ W
Sbjct: 468 NCYKFNSAGTPVHLMGKKLESIFQKLW 494
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +K NIPDY T+IK+P+DLGT++ K +SG YS F D+ L FSN YN
Sbjct: 254 FRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGT 313
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ V +M L+ FE + K +
Sbjct: 314 ESPVGVMGKNLQATFERQLKQL 335
>gi|326434902|gb|EGD80472.1| hypothetical protein PTSG_13143 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+++C +++ L S ++ W F PV +L + DY + PMDLGT+K +I SG YS
Sbjct: 342 LRECRKIISELFSKKHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGHYS 401
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
D +F ADVRL FSN YNP + V MA L FE
Sbjct: 402 DVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFEY 440
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 46/89 (51%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L RL + F PVD LNIPDY T+IK PMDLGT+ K+ Y+ D+
Sbjct: 189 VLKRLSALDSKHWFAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTYTSAQECIDDI 248
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
L +N YNP N VHI A L FE
Sbjct: 249 HLMLNNCFVYNPATNPVHIKARELETAFE 277
>gi|17568247|ref|NP_509771.1| Protein BET-2, isoform b [Caenorhabditis elegans]
gi|3877722|emb|CAA93475.1| Protein BET-2, isoform b [Caenorhabditis elegans]
Length = 1087
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 LMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
K C LL + S + F VF PVD +KL I DY VI +PMDL TIK K+ QY
Sbjct: 556 WQKFCSKLLNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQY 615
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
++P F D+ L N YNP + H A LR +FE RWK
Sbjct: 616 AEPEEFVHDINLMVDNCCKYNPKGSPAHSNALELRSFFEQRWK 658
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 188 RLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPM 247
R EP PAG + L ++ + H+ W F PVD +KL IP+Y ++ PM
Sbjct: 272 RTEP--PAGKPTRHTNCLDFVLFTVVKDALKHKHSWPFQLPVDAIKLEIPEYHNIVNTPM 329
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE--VRWKA 305
DL TI+ ++ + Y D+ F N +N +D++IM + + + + W
Sbjct: 330 DLRTIEKRLRNLYYWCAEDAIKDLNTLFDNCKKFNDRNDDIYIMCENIEGVVQRGLEWMP 389
Query: 306 IEKK 309
E+K
Sbjct: 390 SEEK 393
>gi|444514374|gb|ELV10566.1| Bromodomain adjacent to zinc finger domain protein 2B [Tupaia
chinensis]
Length = 1028
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA DV
Sbjct: 932 ILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 989
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
RL F N T+N +D+ ++RKYFE +W
Sbjct: 990 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 1021
>gi|452003453|gb|EMD95910.1| hypothetical protein COCHEDRAFT_1210171 [Cochliobolus
heterostrophus C5]
Length = 912
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 206 MKQCENLLTRLMSHQFG---WVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE+++T LM ++ + F +PVD + LNIP Y +IK PMD GTI+ + +G Y
Sbjct: 545 LKFCESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 604
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
F AD +L F N +NP + V+ M L + FE WK
Sbjct: 605 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEELFESLWK 646
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 208 QCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
Q + LL R+ + + F PVD + LNIP Y+ V+KHPMDL T++ K+ +Y
Sbjct: 342 QSKFLLERIRNTKKIKVSLAFKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKKYKYV 401
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F AD+ +N+ +N Q+ V LR YF
Sbjct: 402 RDFMADLDQMITNSELFNNKQHPVTQAGYNLRAYF 436
>gi|312373442|gb|EFR21185.1| hypothetical protein AND_17423 [Anopheles darlingi]
Length = 401
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 205 LMKQCENLLTRLMS----HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L Q LL +M HQF W F PVD KLN+PDY +IK PMDLGTIK ++ +
Sbjct: 65 LTNQIHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY 124
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
Y D F+N YN P DV +MA TL K F
Sbjct: 125 YWSAKECIKDFNTMFTNCYVYNKPGEDVVVMAQTLEKLF 163
>gi|405951463|gb|EKC19373.1| Bromodomain adjacent to zinc finger domain protein 2B [Crassostrea
gigas]
Length = 2317
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 187 GRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
G+ + KK A S + M C +LT + H GW F PV+ + P Y I+ P
Sbjct: 2181 GKDQEKKKQAAEQSED---MTVCRLILTEMDKHDDGWPFLKPVNFKQF--PAYKKYIRQP 2235
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
MD T+K K+ QY FAADVRL F+N T+N ++V +RK+FEVRWK +
Sbjct: 2236 MDFTTMKNKLRDNQYKTRGDFAADVRLIFNNCQTFNEDDSEVGRAGHNMRKFFEVRWKQL 2295
>gi|194763657|ref|XP_001963949.1| GF20989 [Drosophila ananassae]
gi|190618874|gb|EDV34398.1| GF20989 [Drosophila ananassae]
Length = 907
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 51/95 (53%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L + ++ + H F W F PVD KLN+PDY +IKHPMD+GTIK ++ + Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKHPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA TL K F
Sbjct: 99 KEAIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|62945212|dbj|BAD97681.1| open reading frame X [Mus musculus]
Length = 387
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 97
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 98 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK------CKI 256
++ C+++L ++S + + W F PVD L + DY +IKHPMDL T+K C+
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKVSGLCPCQS 370
Query: 257 TSGQY 261
S Y
Sbjct: 371 QSAPY 375
>gi|358340347|dbj|GAA29956.2| bromodomain-containing protein 3 [Clonorchis sinensis]
Length = 1466
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 44/261 (16%)
Query: 206 MKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+KQC N+L+ + S+++ F PVD + + DY ++K PMDL T+K K+ SGQY
Sbjct: 1118 LKQCSNILSEISSYRYKELNHFFIKPVDARSMGLHDYHNIVKKPMDLHTVKVKLDSGQYH 1177
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE---------------VRWKAIE 307
FA DVRL F+N YN +DV + L FE + +I+
Sbjct: 1178 TRSDFAEDVRLIFTNCYKYNGESSDVGKIGKVLSGIFEDFLSKVPADNEDLDQLIQNSIK 1237
Query: 308 KKLPVTVDM----------TAVPSRADDMIETETRMGM-----PPMKKKKVS--PKETKI 350
+ +TV TA S + + ++ + + P +VS P+
Sbjct: 1238 EHQRLTVQFQQCNDELQRSTAELSSILNTLNSQAKRALHHSTVPVPNSTEVSGYPQSIMC 1297
Query: 351 KAE-----PVRRV--MTNEEKRILSTELEALLEELPESIIDFLKEH--SAGETGEDELEI 401
E P R V MT +EKR LS ++ L E +I +++H S + DE+E+
Sbjct: 1298 GYEIDEEMPERNVQLMTYDEKRQLSLDINKLPGEKLGQVIQIIQQHEPSHRDCNPDEIEL 1357
Query: 402 DIDALSDDTLFALRKLLDDYL 422
D + L TL L + + L
Sbjct: 1358 DFETLQHTTLRELEQYVKAVL 1378
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 206 MKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C N+L + S ++ +F PVD + + DY V+K MDL T+K K+ +GQY
Sbjct: 177 LKACSNILKDISSQRYRDLNHLFLKPVDAEAMGLHDYHDVVKKAMDLSTVKTKLETGQYH 236
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
FA D+RL F+N YN +DV + L+ FE
Sbjct: 237 SKYEFADDIRLMFNNCYKYNGEDSDVAKVGKLLQAIFE 274
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ RL+ ++ W F VD +LN+PDY ++KHPMDLGTIK ++ Y + D+
Sbjct: 920 VINRLLKEKYVWPFTRLVDHERLNLPDYPKIVKHPMDLGTIKQRLNLKFYHSSVECFDDL 979
Query: 272 RLTFSNAMTYNPPQNDVHIMADTL 295
F N +N P +D+ MA L
Sbjct: 980 FTMFRNCYIFNKPGDDIVGMAVKL 1003
>gi|348585937|ref|XP_003478727.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
isoform 2 [Cavia porcellus]
Length = 2198
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +L + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+++GQY + FA
Sbjct: 2099 CSMILNEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSNGQYPNLETFA 2156
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2157 VDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2191
>gi|348585935|ref|XP_003478726.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
isoform 1 [Cavia porcellus]
Length = 2170
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +L + +H+ W F PV+ +KL +P Y VIK PMD TI+ K+++GQY + FA
Sbjct: 2071 CSMILNEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSNGQYPNLETFA 2128
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 2129 VDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2163
>gi|426020769|sp|F7DRV9.1|BRDT_XENTR RecName: Full=Bromodomain testis-specific protein
Length = 933
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD KLN+PDY+ +IK+PMDL TI+ ++ YS L D
Sbjct: 40 VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +M+ L K F
Sbjct: 100 NTMFTNCYIYNKPGDDIVVMSQELEKVF 127
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C N+L +MS ++ W F V+ ++ D IKHPMDL TI+ K+ +G Y
Sbjct: 284 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 341
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
D FA+DVRL F N+ YNPP N+V MA ++ FE
Sbjct: 342 DTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFE 379
>gi|66911387|gb|AAH97199.1| LOC100004566 protein [Danio rerio]
Length = 378
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 152 PLLESVGGPSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCEN 211
P ++SV S++ + + + APN P + + + P+ +N + Q +
Sbjct: 208 PAVQSVWSRSLLQSRRDELPAPN----PHIAQSGPPQPAVRDPSRQGRMTNQLQFLQ-KA 262
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
L+ L H F W F+ PVD KLN+PDY+ +IK PMD+GTIK ++ + Y D
Sbjct: 263 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 322
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 323 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 350
>gi|365759249|gb|EHN01049.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 695
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+N+L L++ + + + F PVD + +N+P YF +K PMDLGTI K+ +Y
Sbjct: 327 MKFCQNILKELVAKRHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWEYQ 386
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
F DVRL F N +NP V++M L + F +W
Sbjct: 387 TMEDFERDVRLVFKNCYKFNPDGTIVNMMGHRLEEVFNSKWADRPNLDEYDSDEDSRNQG 446
Query: 304 ------------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPM 338
+ +E++L + V++ + + + I E R+
Sbjct: 447 DYEDYESEYSESDIDEIIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 506
Query: 339 KKKKVSPKETKIKAEPV--RRVMTNEEKRILSTELEALLEE----LP----ESIIDFLKE 388
K+ K S + K+ RR N+ K +++ +++ ++ E LP E ID +K+
Sbjct: 507 KRGKRSKGRSGSKSASSHGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 566
Query: 389 HSAGETGEDELEIDIDALSDDTLFAL 414
+ +DE+E+D+D L + T+ L
Sbjct: 567 SMPNISEDDEVELDLDTLDNHTILTL 592
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF +K PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 182 FLQPVDPVKLDIPFYFNYVKRPMDLSTIERKLNVGAYEFPEQITEDFNLMVNNSIRFNGP 241
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKK--LPVTVDMTAVPSRADDMI---ETETRMGMP--- 336
+ MA ++ FE + K PV ++ D I +T G P
Sbjct: 242 NAGISQMARNIQASFEKHMLNMPAKDAAPVVAKGRRSSAQEDAPIVIRRAQTHNGRPKRT 301
Query: 337 --PMKKKKVSPKETK 349
P K K + P E+K
Sbjct: 302 IHPPKSKDIYPYESK 316
>gi|302694747|ref|XP_003037052.1| hypothetical protein SCHCODRAFT_64031 [Schizophyllum commune H4-8]
gi|300110749|gb|EFJ02150.1| hypothetical protein SCHCODRAFT_64031 [Schizophyllum commune H4-8]
Length = 1812
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
+ P+K + N ++M C N L +L H+ F PVD ++ P Y +IK+PMD
Sbjct: 1206 VRPQKAQTSGMDMNDLIM--CRNALKKLKVHKRAKFFLKPVDPVRDLAPKYIDIIKNPMD 1263
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
L T++ K+ G Y+D AF D L SNA T+NPP + VH+ A +FE W A+ +
Sbjct: 1264 LATMEIKLEQGHYADRNAFRKDFELMISNAKTFNPPGSLVHMEAINFETFFEKHWAAMTR 1323
Query: 309 KL 310
L
Sbjct: 1324 TL 1325
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 171 RAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVD 230
RAP+ T G S P+ AA+ N K+C +L L +F +F PVD
Sbjct: 1542 RAPSRAASHATGPGPSTPSGPRTTVYAATPINE---KKCREVLKTLSKSEFYPIFAQPVD 1598
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
++ P Y+T I+HPMD T+ K+T G+Y F DV L F N +NPP
Sbjct: 1599 PIRDGCPTYYTEIEHPMDFSTMGKKLTEGKYQTMEDFRKDVELIFKNCRKFNPPSTFPTQ 1658
Query: 291 MADTLRKYFEVRW-KAIEKKL 310
AD + F+ W KA+EKKL
Sbjct: 1659 CADNVEALFKKEWAKAMEKKL 1679
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAF 267
+++L L +H ++F PVD L +P Y+ +I + DL TI+ K+ + +Y AF
Sbjct: 1688 QSVLRDLKTHPSYFIFAEPVDPDLLGVPTYYNIIPKEKARDLRTIQQKLEADKYETVQAF 1747
Query: 268 AADVRLTFSNAMTYN 282
AD+ L NA+T+N
Sbjct: 1748 EADLELMIQNALTFN 1762
>gi|403221147|dbj|BAM39280.1| uncharacterized protein TOT_010000739 [Theileria orientalis strain
Shintoku]
Length = 539
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 196 GAASSSNAM---LMKQC----ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMD 248
A +NA+ L+KQ +NLL+ L+ + G+VF+ PVD K N PDY+ +IK PM
Sbjct: 320 AAFPPTNALRNPLLKQWYSLAQNLLSSLLKQEGGYVFDKPVDAKKQNCPDYYDIIKKPMS 379
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
I+ K+ Y+DP F DV L F N YN P+ V + + LR +F+
Sbjct: 380 FSCIRGKLRKYTYTDPQEFVDDVLLIFENCAKYNKPETWVATVGNNLRDFFK 431
>gi|303275083|ref|XP_003056841.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226461193|gb|EEH58486.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 854
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS----GQ 260
L+++C +LT ++ +F PVD MK+ +PDYF +IK+PMD GT+K ++ S
Sbjct: 246 LIRKCREVLTLTRKNKDARIFAMPVDPMKMGLPDYFDIIKNPMDFGTVKQRLDSKAAGTA 305
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y P+ F DV LT N YN + V M +++R FE W
Sbjct: 306 YDHPMEFYRDVTLTLDNCRLYNKADSVVGTMGESVRADFEKHW 348
>gi|291243780|ref|XP_002741778.1| PREDICTED: bromodomain containing 2-like [Saccoglossus kowalevskii]
Length = 821
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ + HQF W F+ PV+ +L +PDYF +IK+PMDLGTIK ++ S Y +D
Sbjct: 109 VMKAVWKHQFAWPFHAPVNPAELGLPDYFDIIKNPMDLGTIKKRLESNYYYSAKDCISDF 168
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF-----EVRWKAIEKKLPVT----VDMTAVPSR 322
L F+N YN P DV +MA L K F ++ + IE P T PS+
Sbjct: 169 NLMFTNCYLYNKPGEDVVLMAQALEKLFLTKVAQMPQEEIEIPPPSKEAEFFGHTTTPSK 228
Query: 323 ADDMIETETRMGMPPMKK---KKVSPKETKIKAEPVRRV-MTNEEKRILSTELEALLEEL 378
+ T+ PP K K +P EPV + +++ K + ++ + ++
Sbjct: 229 SHTR---STKSVTPPKSKASSKLATPPVLLPIKEPVNQPELSHGSKSVSHHSIQPSIPDI 285
Query: 379 PESIIDFLKE 388
PES++ L +
Sbjct: 286 PESLLQALSQ 295
>gi|195167198|ref|XP_002024421.1| GL14811 [Drosophila persimilis]
gi|194107794|gb|EDW29837.1| GL14811 [Drosophila persimilis]
Length = 678
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 44 KTVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIH 103
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA TL K F
Sbjct: 104 DFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|301607447|ref|XP_002933312.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 2088
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQ-------CENLLTRLMSHQFGWVFNTPVDVMKLNI 236
G+ L P K + SS A K+ C +L+ + SH+ W F PV+ +KL +
Sbjct: 1957 GDENSLSPSKQESSPSSKKARSAKEELKDLSLCSVILSEMESHEDAWPFLLPVN-LKL-V 2014
Query: 237 PDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
P Y VIK PMD TI+ K+++GQY AFA DVRL F+N T+N ++++ +R
Sbjct: 2015 PGYKKVIKKPMDFATIRDKLSNGQYPSFEAFALDVRLVFNNCETFNEDESEIGRAGHKMR 2074
Query: 297 KYFEVRW 303
+FE RW
Sbjct: 2075 VHFEKRW 2081
>gi|313232668|emb|CBY19338.1| unnamed protein product [Oikopleura dioica]
Length = 814
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 47/82 (57%)
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTY 281
++F PVD KL +PDY +I HPMD+GT++ K+ G+YSDP+ D+ L F N Y
Sbjct: 242 SYLFYEPVDYKKLKLPDYPKIITHPMDMGTVRQKLVDGKYSDPMEVQKDMELMFHNCYRY 301
Query: 282 NPPQNDVHIMADTLRKYFEVRW 303
NPP N V A L F W
Sbjct: 302 NPPSNSVVKAAKKLDTIFHKIW 323
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L ++ HQ W F PVD + L +PDY+ V+K PMDL TIK K + QY+ +D
Sbjct: 24 ILVKVQKHQHSWPFQKPVDPVALALPDYYEVVKKPMDLSTIKKKFDTYQYNSGAEALSDF 83
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
+ FSN YN P +DV +M + F+
Sbjct: 84 EVMFSNCYLYNKPTDDVTLMCQAVESAFK 112
>gi|299755165|ref|XP_002912074.1| bromodomain-containing protein [Coprinopsis cinerea okayama7#130]
gi|298411098|gb|EFI28580.1| bromodomain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 823
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 160 PSVVLAPKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSH 219
P + PK + P ++ P K N +KP S A K C LL L
Sbjct: 436 PEPLARPKREIHPPPPKDLPYEHKVN------RKPKRVVDESMAEQFKFCSKLLNDLFKK 489
Query: 220 QFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFS 276
Q+ + F PVD +++ IP Y +IK PMD+ T++ K+ +G+Y+ P FA D RL
Sbjct: 490 QYYNIAHPFYEPVDWVRMEIPSYPKIIKKPMDMSTMRKKLDNGEYATPQKFAEDFRLMLR 549
Query: 277 NAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTV 314
N T+NP V L + FE +WKA+ P V
Sbjct: 550 NCSTFNPVGTPVCTAGQQLGRVFEEKWKALPPLRPTHV 587
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P+ P G ++ S A K C + + L + F PVD ++LNIP Y ++IKHPMD
Sbjct: 261 PRSP-GTSTMSLAQW-KYCGSCIRSLKKLKDSIPFLKPVDPVQLNIPHYPSIIKHPMDFS 318
Query: 251 TIKCKITSGQYSDPLA------------FAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
TI+ K+ S P F +DVRL F+N +T+N P + V M + +
Sbjct: 319 TIERKLNSSNPVKPDPNPDNPRYLTVEDFVSDVRLVFTNCLTFNGPDHVVTQMGKRVEQV 378
Query: 299 FEVRWKAI 306
F+ K +
Sbjct: 379 FDKHLKGM 386
>gi|424513402|emb|CCO66024.1| predicted protein [Bathycoccus prasinos]
Length = 964
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 125 KKVASLSSNVVLSPSSDIRSCN-DGQKRPLLESVGGPSVVLAPKGKKRAPNGRNGPQTKK 183
KK + N ++RS +G++R + ++V P L+ GKKR + +
Sbjct: 455 KKHVTQCMNDYYFGVQNLRSAGKNGRERVVGKAVTRPKGKLSL-GKKRKQAATDIIEDAP 513
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI 243
G E K AA ++ + + + +L RLMS + + F VD + L+IPDY +I
Sbjct: 514 GAGADTEDSKLMNAAKANRPI--NRYKAILQRLMSDRNAFPFLEKVDPIALDIPDYLDII 571
Query: 244 KHPMDLGTIKCKI------------TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIM 291
HPMD GTI ++ T SDP FA DVRL F+NA TYN P V++
Sbjct: 572 SHPMDFGTIFKRLEPEDEHGVPLETTYYTDSDPSKFANDVRLVFANAFTYNKPSELVYVQ 631
Query: 292 ADTLRKYFEVRW 303
A+ L + FE W
Sbjct: 632 AEKLAQLFEREW 643
>gi|301607445|ref|XP_002933311.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 2138
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQ-------CENLLTRLMSHQFGWVFNTPVDVMKLNI 236
G+ L P K + SS A K+ C +L+ + SH+ W F PV+ +KL +
Sbjct: 2007 GDENSLSPSKQESSPSSKKARSAKEELKDLSLCSVILSEMESHEDAWPFLLPVN-LKL-V 2064
Query: 237 PDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLR 296
P Y VIK PMD TI+ K+++GQY AFA DVRL F+N T+N ++++ +R
Sbjct: 2065 PGYKKVIKKPMDFATIRDKLSNGQYPSFEAFALDVRLVFNNCETFNEDESEIGRAGHKMR 2124
Query: 297 KYFEVRW 303
+FE RW
Sbjct: 2125 VHFEKRW 2131
>gi|326434901|gb|EGD80471.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 905
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+++C +++ L S ++ W F PV +L + DY + PMDLGT+K +I SG YS
Sbjct: 342 LRECRKIISELFSKKHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGHYS 401
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
D +F ADVRL FSN YNP + V MA L FE
Sbjct: 402 DVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 46/89 (51%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L RL + F PVD LNIPDY T+IK PMDLGT+ K+ Y+ D+
Sbjct: 189 VLKRLSALDSKHWFAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTYTSAQECIDDI 248
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
L +N YNP N VHI A L FE
Sbjct: 249 HLMLNNCFVYNPATNPVHIKARELETAFE 277
>gi|341903331|gb|EGT59266.1| CBN-BET-2 protein [Caenorhabditis brenneri]
Length = 1460
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 LMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
K C L+ + S + F VF PVD +KL I DY VIK PMDL TIK K+ QY
Sbjct: 743 WQKFCSKLIQEMHSLKNKGFAQVFYLPVDPIKLKIFDYLDVIKTPMDLQTIKKKLDHKQY 802
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
DP F AD+ L N YNP + VH A L+ F+ RWK
Sbjct: 803 IDPEEFVADMNLMVDNCCKYNPKGSAVHQNALDLKALFDERWK 845
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 179 PQTKKGNSGRLEP---------KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPV 229
P TK S R +P P G + L ++ + H+ W F PV
Sbjct: 398 PDTKPWQSPRQQPIEGVVQPRTNPPPGKPTRHTNCLDYVLFTVIKDAVKHKHSWPFQFPV 457
Query: 230 DVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVH 289
D KL IP+Y +I PMDL TI+ +I + Y D+ FSN +NPP+ DV+
Sbjct: 458 DANKLEIPEYHNMITRPMDLHTIEQRIRNIYYWSAQDAIQDINQLFSNCYKFNPPEYDVY 517
Query: 290 IMADTLRKYFEVRWKAIEK 308
MA TL + + + K + +
Sbjct: 518 KMAKTLERQIQTQLKDLPR 536
>gi|392570887|gb|EIW64059.1| hypothetical protein TRAVEDRAFT_55102 [Trametes versicolor FP-101664
SS1]
Length = 1844
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 139 SSDIRSCNDG---QKRPLLESVGGPSVVLAPKGKK------RAPNGRN-GPQTKKGNSGR 188
S IR+ G K PL P + L P + RAP GP+ +K S
Sbjct: 1141 SKPIRALKSGGPTPKSPLASFTVPPKLKLLPGNSQSDVSAARAPGSATPGPEKRKEFS-- 1198
Query: 189 LEPKKPAGA-----------ASSSNAML--MKQCENLLTRLMSHQFGWVFNTPVDVMKLN 235
PK PA A A SS + ++ C L ++ +++ +F PVD ++
Sbjct: 1199 -VPKVPAKASEKKTGKAAPRAQSSGMSVHDLRACRTALKKVQTNKHAALFLQPVDPVRDR 1257
Query: 236 IPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
P+YF VIK PMD+ T+ K+ SGQY D AF AD RL +NA TYN P + H L
Sbjct: 1258 APNYFDVIKAPMDMSTMNAKLESGQYKDRFAFEADFRLMTNNAKTYNMPGSFAHNETLEL 1317
Query: 296 RKYFEVRWKAIEKKLPV 312
+F+ W I K L V
Sbjct: 1318 ESFFDKMWVRINKTLEV 1334
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+C ++L L +F PVD ++ PDY I PMD GT+ K+T G+YS
Sbjct: 1609 KKCRDILKTLAKVPEALIFMRPVDPIQDGCPDYLKEITDPMDFGTMHTKLTQGKYSTMED 1668
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
FA D L FSN +NP Q ++ AD + + ++ W KA+EKKL
Sbjct: 1669 FARDAELVFSNCRRFNPEQTYPYVCADAVERVWKKEWAKAMEKKL 1713
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDP 264
+ + L+ L+ Q WVF PVD + L IP YF +I K DL I+ K+ +Y
Sbjct: 1719 RSLQGLMKTLLVEQVTWVFREPVDPVALGIPTYFDIIPKKDARDLRMIQQKLNGDKYDSV 1778
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
AF AD+ L NA+T+N ++V +A +R +
Sbjct: 1779 EAFEADLDLMIYNAITFNGADSEVGQLAVQVRNRY 1813
>gi|165970446|gb|AAI58274.1| LOC100144959 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD KLN+PDY+ +IK+PMDL TI+ ++ YS L D
Sbjct: 40 VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +M+ L K F
Sbjct: 100 NTMFTNCYIYNKPGDDIVVMSQELEKVF 127
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 206 MKQCENLLTRLMSH---QFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C N+L +MS ++ W F V+ ++ D IKHPMDL TI+ K+ +G Y
Sbjct: 294 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 351
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
D FA+D+RL F N+ YNPP N+V MA ++ FE
Sbjct: 352 DTQDFASDIRLMFMNSYKYNPPDNEVVNMARKMQDVFE 389
>gi|303390444|ref|XP_003073453.1| putative bromodomain-containing transcription factor
[Encephalitozoon intestinalis ATCC 50506]
gi|303302599|gb|ADM12093.1| putative bromodomain-containing transcription factor
[Encephalitozoon intestinalis ATCC 50506]
Length = 371
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 198 ASSSNAML---MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
+S N ++ +K C +LTRL + F PVD +KL IPDY IKHPMDL TI+
Sbjct: 6 VNSGNILIEYQLKYCSQILTRLKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRK 65
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTV 314
K+ +Y F D++L F+N TYNPP VH M L + + + +++P
Sbjct: 66 KLDHKEYEGVEGFDGDMKLMFNNCYTYNPPGTVVHDMGKALETVYNGLMEGMPQEVPKKR 125
Query: 315 DMTAVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAE 353
T P G P K+ V P + +K E
Sbjct: 126 KKTETPVS-----------GRPKQPKRSVKPVDGGMKTE 153
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 186 SGRLEPKKPAGAASSSNAMLMKQ----CENLLTRLM--SHQ-FGWVFNTPVDVMKLNIPD 238
SGR PK+P + + + + C +L LM H+ + W F PVD +P
Sbjct: 133 SGR--PKQPKRSVKPVDGGMKTEDYEFCSEVLADLMRPKHKAYNWPFLEPVDAEL--VPG 188
Query: 239 YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVH 289
Y+++IK PMD+ TI+ K+ +Y F D+ L N +N P +V+
Sbjct: 189 YYSIIKEPMDMQTIRIKLEQRKYQSTDEFERDLELIVENCKKFNAPGTEVY 239
>gi|1749522|dbj|BAA13819.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 165 APKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---F 221
APKG R R +SG E +A MK C+++L L+ Q +
Sbjct: 3 APKGGARTR--RQAAMYSNSSSGIRETMYDLKPHRRKDAAEMKFCQSVLKELLKKQHEAY 60
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTY 281
+ F PV+ PDYF VIKHPMDLGT++ K+ +Y+ AF AD+ L F N +
Sbjct: 61 AYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKF 120
Query: 282 NPPQNDVHIMADTLRKYFEVRW 303
N VH+M L F+ W
Sbjct: 121 NSAGTPVHLMGKKLESIFQKLW 142
>gi|409083644|gb|EKM84001.1| hypothetical protein AGABI1DRAFT_104011 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1854
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
++ C N L +L S++ +F PVD ++ + P YF ++K PMDL TI K+ +G Y D
Sbjct: 1256 LRACRNALRKLQSNRHALLFKQPVDPIRDSAPRYFDIVKEPMDLSTIGAKLEAGMYKDRF 1315
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
AF +D L SNA YN + H A L +FE +W I K L
Sbjct: 1316 AFRSDFHLMISNAKIYNAAGSYAHNEAIALETFFEKQWSIINKTL 1360
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+C+ LL L+ +F++PVD ++ P Y I HPMDLGT+ K+T QY+
Sbjct: 1618 KKCKELLKSLLKIPEAGLFSSPVDPIRDGCPTYLEEIAHPMDLGTMSQKLTENQYTTMED 1677
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
F D+ L N +NPP AD L K F+ W KA+E+KL
Sbjct: 1678 FKKDIELVLYNCRQFNPPSTYPISCADVLEKAFKKEWLKAMERKL 1722
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAF 267
+ ++T L+ WVF PVD + L IP YF +I K DL TI+ K+ + +Y AF
Sbjct: 1731 QGVMTSLVKDTISWVFREPVDPVLLEIPTYFDIIPRKDARDLRTIRQKLDNDKYDTIEAF 1790
Query: 268 AADVRLTFSNAMTYNPPQNDV 288
AD+ L NA+T+N +++V
Sbjct: 1791 EADLDLMIQNAITFNGRESEV 1811
>gi|260793791|ref|XP_002591894.1| hypothetical protein BRAFLDRAFT_125529 [Branchiostoma floridae]
gi|229277106|gb|EEN47905.1| hypothetical protein BRAFLDRAFT_125529 [Branchiostoma floridae]
Length = 1570
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+K CE++L +LM ++ F PVDV ++PDY+ VIK PMDL TIK K Y P
Sbjct: 1437 LKTCEDILQKLMRNKSSIYFRKPVDVE--DVPDYYDVIKKPMDLTTIKNKCVCLDYCSPQ 1494
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F DV F NA YN +D+ ADTL KYF
Sbjct: 1495 EFINDVSCIFDNAHEYNKIGSDIRDKADTLEKYF 1528
>gi|344301621|gb|EGW31926.1| hypothetical protein SPAPADRAFT_61027 [Spathaspora passalidarum
NRRL Y-27907]
Length = 330
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 219 HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNA 278
+ + + F +PVD + LNIP+Y V+K PMDLGTI+ K+ + QY + F DVRL F N
Sbjct: 6 YNYNFPFLSPVDTVALNIPNYNEVVKEPMDLGTIQTKLANNQYENGDEFEHDVRLVFKNC 65
Query: 279 MTYNPPQNDVHIMADTLRKYFEVRW 303
+NP DV++M L F+ +W
Sbjct: 66 YLFNPEGTDVNMMGHRLEAVFDKKW 90
>gi|330913598|ref|XP_003296313.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
gi|311331637|gb|EFQ95588.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
Length = 909
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 206 MKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE+++T L+ ++ V F TPVD + LNIP Y +IK PMD GTI+ + +G Y
Sbjct: 546 LKFCESVITELLKPKYTAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 605
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
F AD +L F N +NP + V+ M L FE WK
Sbjct: 606 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLWK 647
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 198 ASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
A + M Q + LL R+ + + F PVD L IP+Y ++KHPMDL T++
Sbjct: 333 AWPTTPMTEAQNKFLLERIRNTKKIKVSLAFKDPVDPHALGIPNYPEIVKHPMDLSTMES 392
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
K+ +Y+ F AD+ +N+ +N Q+ V LR YF
Sbjct: 393 KLKEKKYNYVRDFMADLDQMITNSELFNNKQHPVTQAGYNLRAYF 437
>gi|340721599|ref|XP_003399205.1| PREDICTED: bromodomain-containing protein 2-like [Bombus
terrestris]
Length = 388
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 49/90 (54%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ +L + HQF W F PVD KLN+PDY +IK PMDLGTIK ++ + Y
Sbjct: 76 KGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQ 135
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA L K F
Sbjct: 136 DFNTMFTNCYVYNKPGEDVVVMAQALEKLF 165
>gi|428182995|gb|EKX51854.1| hypothetical protein GUITHDRAFT_49703, partial [Guillardia theta
CCMP2712]
Length = 75
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 49/75 (65%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
FN PVD + LNIP Y VIK+PMDLGT+ K+ +G Y + ADV+L + NAM +NPP
Sbjct: 1 FNVPVDPVALNIPTYLDVIKNPMDLGTVLSKLENGFYERKEQWVADVKLVWENAMVFNPP 60
Query: 285 QNDVHIMADTLRKYF 299
NDVH A + YF
Sbjct: 61 GNDVHECARHMASYF 75
>gi|426201311|gb|EKV51234.1| hypothetical protein AGABI2DRAFT_182197 [Agaricus bisporus var.
bisporus H97]
Length = 1842
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
++ C N L +L S++ +F PVD ++ + P YF ++K PMDL TI K+ +G Y D
Sbjct: 1244 LRACRNALRKLQSNRHALLFKQPVDPIRDSAPRYFDIVKEPMDLSTIGAKLEAGMYKDRF 1303
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
AF +D L SNA YN + H A L +FE +W I K L
Sbjct: 1304 AFRSDFHLMISNAKLYNAAGSYAHNEAIALETFFEKQWSIINKTL 1348
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+C+ LL L+ +F++PVD ++ P Y I HPMDLGT+ K+T QY+
Sbjct: 1606 KKCKELLKSLLKIPEAGLFSSPVDPIRDGCPTYLEEIAHPMDLGTMSQKLTENQYTTMED 1665
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
F D+ L +N +NPP AD L K F+ W KA+E+KL
Sbjct: 1666 FKKDIELVLNNCRQFNPPSTYPISCADVLEKAFKKEWLKAMERKL 1710
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAF 267
+ ++T L+ WVF PVD + L IP YF +I K DL TI+ K+ + +Y AF
Sbjct: 1719 QGVMTSLVKDSISWVFREPVDPVLLEIPTYFDIIPRKDARDLRTIRQKLDNDKYDTIEAF 1778
Query: 268 AADVRLTFSNAMTYNPPQNDV 288
AD+ L NA+T+N +++V
Sbjct: 1779 EADLNLMIQNAITFNGQESEV 1799
>gi|196014713|ref|XP_002117215.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
gi|190580180|gb|EDV20265.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
Length = 1478
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+K+C L+ L H+ W F PVD K +PDY+ ++K+PMD TIK K++S +Y DP
Sbjct: 1358 LKKCHELIKDLEEHRDSWPFLQPVD--KNKVPDYYEIVKNPMDFQTIKKKLSSIRYKDPR 1415
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
FA DVRL F N YN P++ + L ++E +
Sbjct: 1416 EFATDVRLVFINCAEYNNPRSREARAGNRLSMFYETK 1452
>gi|409051976|gb|EKM61452.1| hypothetical protein PHACADRAFT_156702 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1899
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 150 KRPLLESVGGPSVVLAPKGKKRAPNGRNGPQT------KKGNSGRLEPKKPA-------- 195
K PL +VG L G + R GP+T K N G PK PA
Sbjct: 1144 KSPLTPTVGSTKFKLPGTGTRVEVTAR-GPETPRTEAKKATNDGFAVPKPPAPKKTEIKS 1202
Query: 196 ----------GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKH 245
G S+ + + C L +L++H+ VF PVD ++ PDY VIK+
Sbjct: 1203 APKSIPKAQSGGMSTQD---LVGCRATLKKLIAHKSAPVFRQPVDPVRDRAPDYMQVIKN 1259
Query: 246 PMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA 305
PMDLGT+ K+ G Y + F D RL +NA YN P++ V+ A L YF+ W
Sbjct: 1260 PMDLGTMGVKLDRGMYKNRSEFEQDFRLMCTNAKLYNAPRSFVYDEAVRLESYFDKEWAR 1319
Query: 306 IEKKL 310
+ K L
Sbjct: 1320 VNKTL 1324
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
Query: 160 PSVV-LAPKGKKR-APNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLM 217
PSV L+ KGK+R AP+ + P+ KK P P A+ N ++C+++L L+
Sbjct: 1624 PSVPKLSIKGKEREAPSPISTPKLKK-------PSPPHQIATLVNE---RKCKDILRTLI 1673
Query: 218 SHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSN 277
+F PVD ++ P Y+ I++PMD T++ K+T G+Y FA DV LT +N
Sbjct: 1674 KIPDAAIFLQPVDPIRDGCPTYYDEIQNPMDFSTMQAKLTQGEYQTMDDFAKDVELTLAN 1733
Query: 278 AMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
+NPP AD + K ++ W K + KKL
Sbjct: 1734 CRQFNPPTTYPVHCADVVEKAWKSLWSKTMAKKL 1767
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDP 264
K + L+ +L++ +VF PVD + L IP YF VI K+ DL TI+ K+ + +Y
Sbjct: 1773 KALQILMNKLVADPVSFVFREPVDPVLLQIPTYFDVIPKKNARDLRTIRQKLDAEKYDSI 1832
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLR-KY 298
A+ AD+ L NA+ +N ++V I+A +R KY
Sbjct: 1833 DAWEADLDLMIENALLFNGADSEVGIIAAQVRDKY 1867
>gi|384496605|gb|EIE87096.1| hypothetical protein RO3G_11807 [Rhizopus delemar RA 99-880]
Length = 1667
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
E ++ R MS+ + F PVD +K +P YFT+IK PMDLGT++ K+ + +Y++PL
Sbjct: 1252 ETIILRAMSNPHAFEFLRPVDPVKQGVPHYFTIIKEPMDLGTVETKLRNNEYTNPLEMNE 1311
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
D+RL F N T+NPP V+ A L + + W+
Sbjct: 1312 DIRLVFRNCYTFNPPNTYVYNEAKMLEEDYNKDWQ 1346
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+K+C +L ++ H F PVD + P+Y+ +IK+PMDL IK K+ + +Y+
Sbjct: 1048 LKKCRRVLNKINKHGCALPFVQPVDEVLDGAPNYYKIIKNPMDLSLIKRKVENKEYTTFR 1107
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
F D+RL +N TYN P V+ L FE
Sbjct: 1108 QFEDDIRLMLNNCYTYNGPGTYVYNEGQALEAVFE 1142
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+CE ++ +L +HQ F+ PVD + +P Y+ VIK PMDL I+ ++ +
Sbjct: 1416 KKCERIIKKLWAHQASAAFHKPVDAIAEGVPHYYDVIKRPMDLSVIQRNFDQDKFKNIWE 1475
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA 305
D+R F N ++N + V L +F W A
Sbjct: 1476 LERDIRQIFWNCYSFNHHGSWVVKQCQALEAFFNQIWSA 1514
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ ++ L + +FN PVD+ L PDY +IK PMDL TI ++ SG+Y+ A
Sbjct: 1531 QKVINNLTYRECAALFNEPVDLSAL--PDYAQIIKKPMDLRTIWERLESGKYTSLKAIDQ 1588
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
D+RL F N TYN + L KY+
Sbjct: 1589 DIRLVFKNCFTYNAVGTFGYEQGKQLEKYYH 1619
>gi|388580227|gb|EIM20543.1| hypothetical protein WALSEDRAFT_60853 [Wallemia sebi CBS 633.66]
Length = 1762
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 172 APNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDV 231
AP+G + K + P+ G SS + + C + R+ H+ F PVD
Sbjct: 1199 APSGSGLNISLKKKRDKAVPQAQRGGMSSQD---VSACRAIHKRIQGHKTAGWFLYPVDP 1255
Query: 232 MKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIM 291
++ PDYFT+IK PMD+GT+ K+ SG Y+ + D +L NA TYN P + VH
Sbjct: 1256 VRDGAPDYFTIIKEPMDIGTMSAKLDSGHYASRFDYENDFKLIIKNATTYNGPSSPVHKT 1315
Query: 292 ADTLRKYFEVRWKAIEKKL 310
A L +F+ +W+ + L
Sbjct: 1316 ALELDAFFDKQWQRVANTL 1334
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 204 MLMKQCENLLTRLMSHQFGWV-------FNTPVDVMKLNIPDYFTVI--KHPMDLGTIKC 254
ML K N L+S GW F PVD + L IP Y +I ++ DL I+
Sbjct: 1616 MLPKIPHNEKRSLVSTMKGWYKSEHAFWFLQPVDPVALGIPHYNDIIPQENMRDLSLIQS 1675
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
K+ QY AF AD++L NA+ +N P + V I A L K
Sbjct: 1676 KLEKDQYPSVDAFEADIKLMTYNAILFNGPDSPVSISAKILEK 1718
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
++ + LL +L +F PVD + P Y IK PMD TI + +Y
Sbjct: 1513 RKAKILLRKLTGMPEAAIFLQPVDPILHGCPTYLDEIKRPMDFSTISKNMDQKKYVTNDE 1572
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMA---DTLRKYFEVRWKAI 306
F DV F N +N + A D + K F+ W++I
Sbjct: 1573 FINDVEQIFKNCRQFNGTSETSTLTAQTCDPVEKAFKREWRSI 1615
>gi|396464495|ref|XP_003836858.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
gi|312213411|emb|CBX93493.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
Length = 907
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 206 MKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ CE+++T LM ++ + F +PVD + LNIP Y +IK PMD GTI+ + +G Y
Sbjct: 546 LRFCESVMTELMKPKYSAITFPFTSPVDPVALNIPSYLKIIKKPMDFGTIERNLKNGLYQ 605
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
F AD +L F N +NP + V+ M L FE WK
Sbjct: 606 SAKDFYADAQLVFQNCYKFNPEGDAVNKMGHQLEDLFESLWK 647
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 204 MLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
M Q LL R+ + + F PV+ + L IP Y ++KHPMDL T++ K+ +
Sbjct: 338 MTEAQNRFLLERIRNTKKIKVSLAFKDPVNPVLLGIPTYPEIVKHPMDLSTMEHKLKDKK 397
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF------EVRWKAIEKKLPVTV 314
Y++ F AD+ N+ +N + V LR YF R A E+ +P
Sbjct: 398 YNNVREFMADLDQMIENSELFNNKHHPVTQAGYNLRAYFLKGMGKMPRGSAAEEPVPKGK 457
Query: 315 DMTAVPSRADDMIETETRMGMPPMKKKKV 343
S A+ E+R+ +P +K V
Sbjct: 458 SKKPSGSTANAKQRRESRVAVPTVKAPAV 486
>gi|449802362|pdb|4DON|A Chain A, Brd4 Bromodomain 1 Complex With A Fragment
3,4-dihydro-3-methyl-2(1h)- Quinazolinon
Length = 145
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P KP + +L +L L HQF W F PVD +KLN+PDY+ +IK PMD+G
Sbjct: 32 PNKPKRQTNQLQYLL----RVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMG 87
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
TIK ++ + Y + D F+N YN P +D+ +MA+ L K F
Sbjct: 88 TIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 136
>gi|301109737|ref|XP_002903949.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262096952|gb|EEY55004.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 1186
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 211 NLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAF 267
++L +LM+ ++ G VFNTPVD + L +P Y T+++HPMDLGT+K + +G+Y + F
Sbjct: 379 DILLKLMADPRNRHG-VFNTPVDPIALELPAYTTIVQHPMDLGTVKRNLAAGEYLELEDF 437
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+DVRL F NAM +NP + +H+ A L F
Sbjct: 438 VSDVRLVFENAMVFNPESHYIHVDAGILLNRF 469
>gi|432110957|gb|ELK34430.1| Bromodomain testis-specific protein, partial [Myotis davidii]
Length = 842
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 10/110 (9%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLG------TIKCKI 256
++ C +L L + + + W F PVDV L + +Y+ ++K+PMDLG TI K+
Sbjct: 227 LRHCSEILKELFAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGNPEFLFTI-LKM 285
Query: 257 TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
+ +Y D FAADVRL F N YNPP ++V MA L+ FE+ + I
Sbjct: 286 DNQEYKDAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKI 335
>gi|323332433|gb|EGA73842.1| Bdf1p [Saccharomyces cerevisiae AWRI796]
Length = 420
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L LM+ + + + F PVD + +N+P YF +K PMDLGTI K+ QY
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F DVRL F N T+NP V++M L + F +W
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KL+IP YF IK PMDL TI+ K+ G Y P D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|50285717|ref|XP_445287.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524591|emb|CAG58193.1| unnamed protein product [Candida glabrata]
Length = 643
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 51/260 (19%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ ++ LMS + F + F PVD + LN P YF +K PMDLGT+ K+++ +Y
Sbjct: 287 MKFCQGVVRELMSKKYASFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTVSKKLSNWEYE 346
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW------------------- 303
+ D+RL F N +NP V++M L F +W
Sbjct: 347 NLDQAEHDIRLIFQNCYAFNPDGTIVNMMGHRLEDIFNTKWADRPLYSDVESEEAESAYD 406
Query: 304 ---------------------KAIEKKLP-VTVDMTAVPSRADDMIETETRMGMPPMK-- 339
+ +E +L + V++ + + + I E R+ P K
Sbjct: 407 DEESDESDVEIDETSITNPAIQYLEDQLERMKVELQQLKKQELEKIRKERRLARGPKKTR 466
Query: 340 -----KKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEHSAGET 394
KK + +T + ++ V+T + K+I++ + L E +I+ +K+
Sbjct: 467 GRRGRKKGSTKAKTGRGKKKLKSVVTYDMKKIITENINDLPTAKLEKVIEIIKKSMPNIG 526
Query: 395 GEDELEIDIDALSDDTLFAL 414
++E+E+D+D L ++T+ L
Sbjct: 527 DDEEVELDLDTLDNNTILTL 546
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF IK PMDL TI+ K+ + Y P D L N+ +N P
Sbjct: 132 FLQPVDPVALNIPLYFNFIKRPMDLQTIERKLNANAYETPEQITEDFNLMVENSAKFNGP 191
Query: 285 QNDVHIMADTLRKYFE 300
+ M ++ FE
Sbjct: 192 TAVITQMGRNIQAAFE 207
>gi|343429422|emb|CBQ72995.1| related to TAF2-component of TFIID complex [Sporisorium reilianum
SRZ2]
Length = 1838
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
G AS + + C N L +LM ++F +F PVD ++ +YF VIK PMDLG+I K
Sbjct: 1221 GQASGMSFADLTACRNTLKKLMQNKFASIFLNPVDPVRDQATNYFDVIKEPMDLGSILNK 1280
Query: 256 ITSGQYSDPLAFAADVRLTFSNAMTYNP-PQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ SGQY D AD L NA TY P P+ H A L K F W +EK L
Sbjct: 1281 LDSGQYKDRHGLRADFELMIGNAKTYTPDPKAWAHKQAVGLEKVFGPLWTRMEKTL 1336
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
P GA ++ M K+ + LL L F F PVD ++ +P Y IK PMDL T++
Sbjct: 1572 PVGA-TAGMPMSGKKGKVLLQVLKKSPFSIFFRFPVDPIRDGLPTYLDEIKQPMDLSTME 1630
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
K+ Y+ FAAD+ L F+N +NPP + AD L K + W K + KL
Sbjct: 1631 KKVNQAAYATMGEFAADMELIFANCRQFNPPGTEPCQHADELEKMWRKEWAKTVTPKL 1688
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAFAA 269
L+ RL +HQ +F PVD + L IP YF VI K DL I+ K+ + +Y A A
Sbjct: 1699 LINRLKTHQSSLLFREPVDPVALGIPTYFDVIARKDARDLSLIEAKLKADKYDSFGALDA 1758
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
DVRL N T+N P + +A Y++
Sbjct: 1759 DVRLMLRNCYTFNAPDPAIVEIAKAFEAYYK 1789
>gi|301109223|ref|XP_002903692.1| hypothetical protein PITG_08294 [Phytophthora infestans T30-4]
gi|262096695|gb|EEY54747.1| hypothetical protein PITG_08294 [Phytophthora infestans T30-4]
Length = 170
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L +C L L H W F PVD + LN+P YF VI PMDLGT+ K+ +G+Y+DP
Sbjct: 7 LHAKCARLHAELSRHSLAWPFLEPVDPVALNVPTYFDVISQPMDLGTMGAKLNAGEYNDP 66
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
+ AD+ L F+NA+ +N V +A+ R++
Sbjct: 67 TEYRADLLLMFANAIEFNQDDERVDSVANMARQF 100
>gi|224057449|ref|XP_002190567.1| PREDICTED: bromodomain testis-specific protein [Taeniopygia
guttata]
Length = 680
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ + H F W F+ PVD LN+PDY+T+IK PMDLGTIK ++ Y+ D
Sbjct: 39 VMRAMWRHNFSWPFHQPVDAAALNLPDYYTIIKKPMDLGTIKKRLEHNYYTKAAECIEDF 98
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ F N YN +D+ MA+ L K F
Sbjct: 99 KTMFWNCYMYNKSGDDIVFMAEELEKVF 126
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F P DV + + K+P DLGTIK K+ + +Y+
Sbjct: 285 LKHCNAILKELFSKKHAAYAWPFIKPEDVASASTGANQAIAKYPTDLGTIKKKMDNFEYN 344
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
D FA DVRL F + N +++ MA L+ FE+ + I + PV D P R
Sbjct: 345 DIQEFATDVRLMFMSCYKRNSSDHEIVAMARKLQDVFEMHFAKIPDE-PVVSDHLPQPVR 403
>gi|396081966|gb|AFN83580.1| putative bromodomain-containing transcription factor
[Encephalitozoon romaleae SJ-2008]
Length = 370
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 195 AGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
A A S +K C +LTR+ + F PVD +KL IPDY IK+PMDL TI+
Sbjct: 6 ASAGSILAEHQLKYCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKNPMDLSTIRK 65
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF---------EVRWKA 305
K+ + +YS P F D++L F+N TYNPP VH M L + EV K
Sbjct: 66 KLDAKEYSGPEGFDDDMKLMFNNCYTYNPPGTIVHDMGKALESAYNDMMAGMPQEVSKKR 125
Query: 306 IEKKLPVT 313
+ ++PVT
Sbjct: 126 KKSEIPVT 133
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 209 CENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
C +L+ L+ H+ + W F PVD +P Y++VIK PMD+ T+K K+ +Y
Sbjct: 157 CSEVLSDLVKPKHKSYNWPFLEPVD--GDLVPGYYSVIKEPMDIQTMKNKLDQRKYHSVE 214
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADD 325
F D+ L N +N P +V+ K + +EK PV + +
Sbjct: 215 EFGRDLELIVENCKKFNAPGTEVYACGQEFEKAVKAH---MEKTSPVDIKNKISELKRKV 271
Query: 326 MIET-ETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIID 384
M T E RM ++ K V + P R + E+ + + + +E E++
Sbjct: 272 MSYTREIRM----LESKLVE----QTGEAPSSRAYSLSERVSIGNAILNMTKEQTENVAK 323
Query: 385 FLKEHSAGETGE-DELEIDIDALSDDTL 411
+ ++ AGE E DE+E+D+ + D +
Sbjct: 324 IVLKNGAGEFVENDEIEVDMRTIPDHVV 351
>gi|443894493|dbj|GAC71841.1| TATA binding protein associated factor [Pseudozyma antarctica T-34]
Length = 1845
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
G AS + + C N L +LM ++ +F PVD ++ DYF VIK PMDLG+I K
Sbjct: 1230 GQASGMSFADLTACRNTLKKLMQNKHASIFLNPVDPVRDQATDYFDVIKEPMDLGSILNK 1289
Query: 256 ITSGQYSDPLAFAADVRLTFSNAMTYNP-PQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ SGQY D A AD L NA TY P P+ H A L K F W +EK L
Sbjct: 1290 LDSGQYKDRHALRADFELMIRNAKTYTPDPKAWAHKQAVGLEKVFGPLWNRMEKTL 1345
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 187 GRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
+L K P GA ++ M K+C+ LL L F F PVD + +P Y IK P
Sbjct: 1580 AKLAEKDPVGA-TAGMPMSGKKCKVLLQVLKKSPFSIFFRFPVDPINDGLPTYLDEIKEP 1638
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KA 305
MDL T++ K+ YS FAAD+ L F+N +NPP + AD L K + W K
Sbjct: 1639 MDLSTMEKKVNQAAYSTMGEFAADMELIFANCRQFNPPGTEPCQHADELEKQWRKEWAKT 1698
Query: 306 IEKKL 310
+ +L
Sbjct: 1699 VTPRL 1703
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAFAA 269
L+ RL +HQ +F PVD + L IP YF VI K DL I+ K+ +Y A A
Sbjct: 1714 LMNRLKTHQSSLLFREPVDPVALGIPTYFDVIPRKDARDLSLIEAKLKGDKYDAFAALDA 1773
Query: 270 DVRLTFSNAMTYN 282
D++L N T+N
Sbjct: 1774 DIKLMLKNCYTFN 1786
>gi|170284622|gb|AAI61214.1| Unknown (protein for IMAGE:8889270) [Xenopus (Silurana) tropicalis]
Length = 356
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+GTIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 94
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN +D+ +MA L K F
Sbjct: 95 NECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIF 129
>gi|330812863|ref|XP_003291336.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
gi|325078478|gb|EGC32127.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
Length = 564
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 29/242 (11%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C+ +L+++ + + F PVD NIPDYF +IK+PMD+ TI K+ + +Y FA
Sbjct: 330 CKTILSQIFKKKISYAFQRPVDPELENIPDYFDIIKNPMDISTIDSKLDNEKYGTIKDFA 389
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW--KAIEKKLPVTVDMTAVPSRADDM 326
ADVRL F NA+TYN + V+ A L YF+ + +K+P + P+ A
Sbjct: 390 ADVRLMFENALTYNAEISPVYKYAKQLLTYFDNSFIKNYPNEKIPTYKSLNPAPAAAPAQ 449
Query: 327 IETETRMGMPPMKKKKVSPKETKIKAE------------------PVRRVMTNEEKRILS 368
+ + P K+K S + K+K E P ++ +E K ++
Sbjct: 450 PNSSSGSANTPNKRKLDS--DIKVKEETSTATTSSSTNDSKSSSPPAKKYSDDERKNLME 507
Query: 369 --TELEALLEELPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLDDYLLEKQ 426
EL A + SIID SA ++ LEID+ + D L + + L++ +KQ
Sbjct: 508 KINELSAEDVQTVLSIID----QSAINQSDESLEIDMYKIDDKNLRQVEQFLNE-CFKKQ 562
Query: 427 QK 428
+K
Sbjct: 563 KK 564
>gi|167526004|ref|XP_001747336.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774171|gb|EDQ87803.1| predicted protein [Monosiga brevicollis MX1]
Length = 1632
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L RL F PVD ++LNIPDYF +IK PMDL TI+ K+ G Y DP F D+
Sbjct: 614 VLERLKGMSAAECFLRPVDPIELNIPDYFEIIKKPMDLSTIEDKLEKGTYKDPWEFCDDM 673
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
RL F NA TYNP + V+ + + FE + K+L
Sbjct: 674 RLMFKNAWTYNPKNHVVYKFTNEVSSVFEDTIDLVMKRL 712
>gi|357490537|ref|XP_003615556.1| Bromodomain-containing protein [Medicago truncatula]
gi|355516891|gb|AES98514.1| Bromodomain-containing protein [Medicago truncatula]
Length = 322
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---YSDPLAFAA 269
+++ ++ W F PVDV L + DY+ +I+ PMD TIK ++ + Y + A
Sbjct: 86 FSQIAKDKWAWPFLDPVDVEGLGLYDYYQIIEKPMDFSTIKIRMEAKDGSGYKNVREIYA 145
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIET 329
DVRL F NAM YN +NDVH+MA TL + FE E + + + A+ E
Sbjct: 146 DVRLIFKNAMKYNDEKNDVHVMAKTLLEKFENDLSKEEAHEELNKRLAQEATYANMTREL 205
Query: 330 ETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESII---DFL 386
T + M + + K A R +++ EK IL+ L P++I+ + +
Sbjct: 206 STELSKVDM-----ALRSLKTTAISQCRKLSHPEKLILANAFTKL---SPDNIVKALEIV 257
Query: 387 KEHSAGETGE-DELEIDIDALSDDTLFALRKLLDDYL 422
KE + D + +D+D+ SD TLF L + + L
Sbjct: 258 KESNPNFKDRIDMVTLDLDSQSDYTLFRLHMFVKNTL 294
>gi|401842077|gb|EJT44353.1| BDF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 634
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L L S + + F PVD + LN+P+YF +IK+PMDLGTI + + +Y
Sbjct: 320 FRTCLKILRILGSKKNSDINFPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNLMNWKYK 379
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F DV L F N +NP N+VH+M L++ F V W
Sbjct: 380 TVDQFINDVNLVFLNCFQFNPEGNEVHLMGKKLKELFSVHW 420
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I K+ Y +D R +N +++N
Sbjct: 155 FLNPVDPIALNIPHYFNYVQTPMDLSLIGKKLQESTYHSVEQVKSDFRTMVNNCLSFNGL 214
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ V +MA ++ YFE + A+
Sbjct: 215 ESSVSLMAKRIQIYFERKLSAM 236
>gi|345565069|gb|EGX48025.1| hypothetical protein AOL_s00081g352 [Arthrobotrys oligospora ATCC
24927]
Length = 890
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
K CE ++ L Q + F PVD + L IPDYF +IK PMD+ I+ K+ +Y+
Sbjct: 529 FKFCETIMKELWKKQHNSIAYPFYNPVDPVALEIPDYFKIIKKPMDMSEIQRKLNHNEYN 588
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F AD+RL F+N +NPP + V+ L F+ +W
Sbjct: 589 NSNEFEADIRLMFNNCYKFNPPSSPVYDCGKQLEAVFDEKW 629
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYN 282
F PVD +KL +P YF +IK+PM L I+ K+T+ +Y +P DV L N++ +N
Sbjct: 328 FLNPVDPVKLQLPTYFEIIKNPMSLFDIEKKLTANEYHNPAELKGDVHLMVQNSILFN 385
>gi|195397557|ref|XP_002057395.1| GJ16365 [Drosophila virilis]
gi|194147162|gb|EDW62881.1| GJ16365 [Drosophila virilis]
Length = 429
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L + ++ + H F W F PVD KLN+PDY +IK PMD+GTIK ++ + Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSA 98
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P DV +MA TL K F
Sbjct: 99 KEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVF 133
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L L S + + W F PVD L + DY +IK PMDLGT+K K+ + +Y
Sbjct: 346 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 405
Query: 263 DPLAFAA 269
FAA
Sbjct: 406 SAPEFAA 412
>gi|255947958|ref|XP_002564746.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591763|emb|CAP98009.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 812
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSH-QFGWV--FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+ +L L + WV F PVD + LNIP Y +VIK PMDL T++ K+ +GQY
Sbjct: 464 LRFCQEVLDELHKQKHYNWVMPFYYPVDPVALNIPSYHSVIKKPMDLSTVQSKLKTGQYE 523
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F +DVRL F N +N P + ++ + + F +W
Sbjct: 524 NAKEFESDVRLIFKNCYRFNIPGDPTYVCGERAEEIFNGKW 564
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 49/97 (50%)
Query: 204 MLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD 263
M K LT L + PVD +KLNIP Y TVI PMDLGT++ K+ + QYS
Sbjct: 272 MQHKFISKSLTSLKRMHDARFYKEPVDAVKLNIPQYHTVITQPMDLGTMERKLKNNQYSS 331
Query: 264 PLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
P A A D L +N +N P + V L+ F+
Sbjct: 332 PQAVADDFALMVNNTTIFNGPDHLVTQEGIKLKATFD 368
>gi|340374210|ref|XP_003385631.1| PREDICTED: hypothetical protein LOC100637162 [Amphimedon
queenslandica]
Length = 2504
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 188 RLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPM 247
R +P +P GA + C++LL L W F PV+ K IPDY+ VIK PM
Sbjct: 2389 RRKPGRPRGAKDD-----LILCQSLLMDLEEQDDAWPFLEPVNRKK--IPDYYRVIKKPM 2441
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D T+K K+ G+Y + + A DVRL F N YN + + + +R+YFE RW
Sbjct: 2442 DFHTVKQKLREGKYPNKESLALDVRLIFDNCAFYNEDNSQIGLAGHNMRQYFEKRW 2497
>gi|393248006|gb|EJD55513.1| Bromodomain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 748
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C L+ + Q + F PVD KL+IP Y +IK PMDL T+K K+ + QYS
Sbjct: 413 LKFCSRLIQEMYKKQHWQIAAPFYEPVDWNKLDIPSYPKIIKKPMDLLTMKKKLDNHQYS 472
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D L F AD +L N T+NPP V+ L FE +W A+
Sbjct: 473 DALKFYADFKLMIRNCFTFNPPGTPVNNAGQALAALFEEKWAAL 516
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 16/107 (14%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS------------GQYSDPLAFAADVR 272
F PVD + LNIP Y T+I HPMDLGT++ K+ + G+YS F AD+R
Sbjct: 229 FLQPVDPLALNIPHYPTIITHPMDLGTVERKLQASNPLKVDSSSAVGRYSAVEEFTADIR 288
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAV 319
L F+N +N P++ V +M L + F+ K I K+LP + D+ V
Sbjct: 289 LIFANCERFNGPEHAVTLMGKRLEQVFD---KQI-KQLPASEDVKPV 331
>gi|268578307|ref|XP_002644136.1| Hypothetical protein CBG04495 [Caenorhabditis briggsae]
Length = 876
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 188 RLEPKKPAGAASSSNAMLMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIK 244
RL P+ + A K C LL + S F VF PVD +KL I DY V+K
Sbjct: 331 RLPPR-----WTGKQAEWQKFCVRLLNEMHSLKNKSFAQVFYVPVDPIKLKIADYLDVVK 385
Query: 245 HPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
+PMDL T+K K+ QY++P F AD+ L N YNP + V+ A L+ FE RWK
Sbjct: 386 NPMDLQTMKKKLDHKQYAEPEEFVADMNLMIDNCCLYNPKGSSVYQNALDLKALFEQRWK 445
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 169 KKRAPNGRNGPQTKKGN---SGRLEP---------KKPAGAASSSNAMLMKQCENLLTRL 216
KK APNG+ GP T GN S R EP + P G + L ++
Sbjct: 25 KKAAPNGKPGP-TSGGNPWESPRQEPVGGVVQPRTEPPKGKPTRHTNCLDHLLFTVIKEA 83
Query: 217 MSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFS 276
+ H+ W F PV+ + L IPDY I PMDL TI+ ++ + Y D+ F
Sbjct: 84 VKHKHSWPFQEPVNAVALAIPDYHKTITRPMDLRTIEKRLRNSYYWSVDDAIKDLNTLFQ 143
Query: 277 NAMTYNPPQNDVHIMADTL 295
N T+N +D++IM + +
Sbjct: 144 NCKTFNDNNDDIYIMCENV 162
>gi|261278845|pdb|3JVJ|A Chain A, Crystal Structure Of The Bromodomain 1 In Mouse Brd4
gi|261278846|pdb|3JVK|A Chain A, Crystal Structure Of Bromodomain 1 Of Mouse Brd4 In
Complex With Histone H3-K(Ac)14
gi|302566174|pdb|3MUK|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Propionylated
Histone H3- K(Prop)23
gi|302566176|pdb|3MUL|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Butyrylated
Histone H3- K(Buty)14
Length = 131
Score = 84.0 bits (206), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQCENLL----TRLMSHQFGWVFNTPVDVMKLNIPDY 239
G G P P + + Q + LL L HQF W F PVD +KLN+PDY
Sbjct: 1 GAMGSTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDY 60
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ +IK PMD+GTIK ++ + Y + D F+N YN P +D+ +MA+ L K F
Sbjct: 61 YKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 120
>gi|255071051|ref|XP_002507607.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226522882|gb|ACO68865.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 433
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSD------PL 265
+L +LM+++ W FN PVD + DY+ VIK PMD GTI K G Y+ L
Sbjct: 151 ILRKLMNNRLSWPFNEPVDAEYWGVQDYYEVIKTPMDFGTIATKYDIGDYNTENSGHGAL 210
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEV 301
F DVR F NA TYN P + V+ A L + FE
Sbjct: 211 KFVTDVRQVFYNAWTYNQPGHQVYQYAQILARIFET 246
>gi|302308121|ref|NP_984928.2| AER068Cp [Ashbya gossypii ATCC 10895]
gi|299789305|gb|AAS52752.2| AER068Cp [Ashbya gossypii ATCC 10895]
gi|374108151|gb|AEY97058.1| FAER068Cp [Ashbya gossypii FDAG1]
Length = 635
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 189 LEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKH 245
+ P + A S + MK C+ +L L + + F + F PVD + LN P YF +K
Sbjct: 227 IYPLENAKPQSKKHQTEMKFCQQVLKELTAKKHASFNYPFLEPVDPIALNCPSYFDYVKE 286
Query: 246 PMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
PMDLGTI K+ + +Y+D F DVRL F N +NP V++M L F +W
Sbjct: 287 PMDLGTIGKKLGNWEYADYDDFERDVRLVFKNCYAFNPDGTLVNMMGHRLEDVFNSKW 344
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KLN+P YF IK PMDL TI+ K+ G Y P A D L N +N
Sbjct: 101 FLQPVDPVKLNVPHYFQHIKRPMDLSTIERKLAVGAYETPEQVAQDFNLMVDNCAKFNGA 160
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA ++ FE
Sbjct: 161 SSVIAQMARNIQASFE 176
>gi|340707459|pdb|2YDW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707460|pdb|2YDW|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707461|pdb|2YDW|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707481|pdb|2YEK|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707482|pdb|2YEK|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707483|pdb|2YEK|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|393715359|pdb|4AKN|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715360|pdb|4AKN|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715361|pdb|4AKN|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
Length = 153
Score = 83.6 bits (205), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 23 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 78
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI---E 307
TIK ++ + Y D F+N YN P +D+ +MA TL K F + ++ E
Sbjct: 79 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEE 138
Query: 308 KKLPVTV 314
++L VT+
Sbjct: 139 QELVVTI 145
>gi|134105371|pdb|2OSS|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|308198555|pdb|3MXF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Jq1
gi|312208162|pdb|3P5O|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ibet Inhibitor
gi|340707484|pdb|2YEL|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|343197715|pdb|3SVF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Dihydro-Quinazolin Ligand
gi|343197716|pdb|3SVG|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-Dimethylisoxazol Ligand
gi|355333223|pdb|3ZYU|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|355333224|pdb|3ZYU|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|358009753|pdb|3U5J|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Alprazolam
gi|358009754|pdb|3U5K|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009755|pdb|3U5K|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009756|pdb|3U5K|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009757|pdb|3U5K|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009758|pdb|3U5L|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Benzo-Triazepine Ligand (Bzt-7)
gi|371927880|pdb|4A9L|A Chain A, N-Terminal Bromodomain Of Human Brd4 With 1,3-Dimethyl-6-(
Morpholine-4-Sulfonyl)-1,2,3,
4-Tetrahydroquinazolin-2-One
gi|372467090|pdb|3UVW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k5ack8ac)
gi|372467092|pdb|3UVY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k16ack20ac)
gi|374074443|pdb|3UVX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k12ack16ac)
gi|380259062|pdb|3UW9|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259063|pdb|3UW9|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259064|pdb|3UW9|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259065|pdb|3UW9|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|384482557|pdb|4E96|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Pfi-1
gi|404312911|pdb|4F3I|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ms417 Inhibitor
gi|409107327|pdb|4GPJ|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Isoxazolylbenzimidazole Ligand
gi|410563162|pdb|4HBV|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563164|pdb|4HBX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563165|pdb|4HBY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|449802776|pdb|4J0R|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
gi|449802777|pdb|4J0S|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
Length = 127
Score = 83.6 bits (205), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 29 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 88
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 89 NTMFTNCYIYNKPGDDIVLMAEALEKLF 116
>gi|320582812|gb|EFW97029.1| hypothetical protein HPODL_1739 [Ogataea parapolymorpha DL-1]
Length = 894
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+ ++ LMS ++ + F PVD + L+ P YF V+K PMDLGTI K+ +G+Y
Sbjct: 579 LRFCQQVIKELMSKKYDSISYPFLAPVDPVALDCPTYFDVVKEPMDLGTIHSKLQNGEYE 638
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F DVRL F N +NP V+IM L F +W
Sbjct: 639 NADEFEKDVRLVFHNCYLFNPEGTAVNIMGHRLESVFNEKW 679
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F TPVD +KLNIP Y+ IK PMDL TI+ K+ Y P D L N +T+N
Sbjct: 430 FLTPVDTVKLNIPFYYNFIKRPMDLSTIERKLNVDAYETPEQVMEDFNLMVDNCITFNGK 489
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA ++ FE
Sbjct: 490 DSAISQMARNIQASFE 505
>gi|452988034|gb|EME87789.1| hypothetical protein MYCFIDRAFT_85828 [Pseudocercospora fijiensis
CIRAD86]
Length = 865
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 206 MKQCENLLTRLMSHQFG---WVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K E +L +L ++ VF TPVD + LNIP Y ++KHPMDL T+ K+ GQY
Sbjct: 499 LKFVEYVLNQLKGPKYATVNHVFQTPVDPVALNIPQYRQIVKHPMDLSTMTQKLNQGQYG 558
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
F D L N + +NPP N + + + ++ FE W+ E+
Sbjct: 559 RAAEFKKDFELMVQNCLAFNPPGNAIRDLGISFQREFEDLWRTKEQ 604
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + + IP Y +IK+PMDL T++ K+ S Y FA D L +N++T+N P
Sbjct: 321 FLKPVDPVAMAIPTYPEIIKNPMDLSTMEQKLKSSHYKTVQEFADDFALIINNSLTFNGP 380
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRADDMIETETRMGMP 336
+ V + YF +K+ M VPS AD + + + G P
Sbjct: 381 NHAVTQAGMAMEAYF--------RKM-----METVPS-ADQQAKAQAKKGSP 418
>gi|363736907|ref|XP_003641771.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Gallus gallus]
Length = 995
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ + H F W F+ PVD LN+PDY+++IK PMDL TIK ++ Y+ D
Sbjct: 39 VMKAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKSAECIDDF 98
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
+ F N YN P +D+ MA L K F
Sbjct: 99 KTMFLNCYIYNKPGDDIVFMAQELEKVF 126
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 144 SCNDGQKRPLLESVGGPSVVLAPKG--KKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSS 201
+CN KR +++ G + + PK KK P+ + P+ K +
Sbjct: 238 TCN---KRKTVKACKGENECMIPKKILKKGLPDSQQSPRVLK---------------KTQ 279
Query: 202 NAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITS 258
+ +K C+ +L + S + + F DV+ ++ + + K P DLGTIK K+ +
Sbjct: 280 LSKQLKYCKEILKEMFSKKHSAYARPFLRSADVVSFSLGEKKGITKCPTDLGTIKKKMDN 339
Query: 259 GQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
+Y D FA DVRL F N N P ++V MA L+ FE + I
Sbjct: 340 FEYRDIQEFATDVRLMFMNCYKRNSPDHEVVAMAKKLQDVFETHFAKI 387
>gi|254579016|ref|XP_002495494.1| ZYRO0B12672p [Zygosaccharomyces rouxii]
gi|238938384|emb|CAR26561.1| ZYRO0B12672p [Zygosaccharomyces rouxii]
Length = 701
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ ++ L+S + F + F PVD + LN P YF +K PMDLGT+ K+ + +Y
Sbjct: 311 MKFCQQVVRELISKKYASFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTVSSKLNNWKYQ 370
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F DVRL F N T+NP V++M L F +W
Sbjct: 371 SMEEFENDVRLVFRNCYTFNPEGTIVNMMGHRLEDVFNSKW 411
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PV+ + LN+P YF IK PMDL TI+ K+ + P D L +N + +N P
Sbjct: 163 FLKPVNPVALNVPFYFNYIKRPMDLSTIERKLNVNAFETPEQVQDDFNLMVNNCVKFNGP 222
Query: 285 QNDVHIMADTLRKYFE 300
Q + MA ++ FE
Sbjct: 223 QAVISQMARNIQASFE 238
>gi|371927839|pdb|4A9E|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927840|pdb|4A9E|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927841|pdb|4A9E|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927842|pdb|4A9F|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927843|pdb|4A9F|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927844|pdb|4A9F|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927869|pdb|4A9H|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927870|pdb|4A9H|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927871|pdb|4A9H|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927872|pdb|4A9I|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927873|pdb|4A9I|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927874|pdb|4A9I|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927875|pdb|4A9J|A Chain A, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927876|pdb|4A9J|B Chain B, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927877|pdb|4A9J|C Chain C, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|374977910|pdb|4A9M|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977911|pdb|4A9M|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977912|pdb|4A9M|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977913|pdb|4A9N|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977914|pdb|4A9N|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977915|pdb|4A9N|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977916|pdb|4A9O|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977917|pdb|4A9O|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977918|pdb|4A9O|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|383875671|pdb|4ALH|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875672|pdb|4ALH|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875673|pdb|4ALH|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|393715366|pdb|4ALG|A Chain A, N-Terminal Bromodomain Of Human Brd2 With Ibet-151
Length = 154
Score = 83.6 bits (205), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
PKKP G ++ L K ++ L HQF W F PVD +KL +PDY +IK PMD+G
Sbjct: 23 PKKP-GRVTNQLQYLHKV---VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMG 78
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI---E 307
TIK ++ + Y D F+N YN P +D+ +MA TL K F + ++ E
Sbjct: 79 TIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEE 138
Query: 308 KKLPVTV 314
++L VT+
Sbjct: 139 QELVVTI 145
>gi|299756392|ref|XP_001829302.2| TATA-binding protein associated factor Taf2 [Coprinopsis cinerea
okayama7#130]
gi|298411655|gb|EAU92262.2| TATA-binding protein associated factor Taf2 [Coprinopsis cinerea
okayama7#130]
Length = 1794
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K C++ L +L +++ +F PVD ++ + P+YF +IK PMDL T+ K+ G Y D A
Sbjct: 1131 KACKSALKKLKANKHALLFLQPVDPIRDHAPNYFDIIKEPMDLSTMGAKLEEGLYKDRFA 1190
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
F D RL +NA YN + VH A TL +FE +W I K L
Sbjct: 1191 FQQDFRLMIANAKLYNMVGSFVHNEAITLETFFEKQWSIINKTL 1234
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAF 267
+ +++ ++ WVF PVD + L IP YF VI K DL TI+ K+ S +Y A+
Sbjct: 1672 QAIMSTIVKEPVSWVFREPVDPVLLGIPTYFDVIPRKDARDLRTIRSKLDSDKYDTVEAW 1731
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLR 296
AD+ L +NA+ +N ++V I+A LR
Sbjct: 1732 EADIDLMIANAIKFNGADSEVGIVAKQLR 1760
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+ + LL L +F PVD + P Y I HPMD GT+ K+ G Y
Sbjct: 1559 KKVKELLKTLTRIPEAAIFLRPVDPVLDGCPTYLDEIAHPMDFGTMNTKLQQGLYMSMED 1618
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
D+ L F+N +NP AD + + F+ W KA+E+KL
Sbjct: 1619 VKKDIELIFANCRQFNPVGTFPVDCADIVERAFKKEWPKAMERKL 1663
>gi|410563163|pdb|4HBW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazoline Ligand
Length = 127
Score = 83.6 bits (205), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L HQF W F PVD +KLN+PDY+ +IK PMD+GTIK ++ + Y + D
Sbjct: 29 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 88
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA+ L K F
Sbjct: 89 NTMFTNCYIYNKPGDDIVLMAEALEKLF 116
>gi|308494761|ref|XP_003109569.1| CRE-BET-2 protein [Caenorhabditis remanei]
gi|308245759|gb|EFO89711.1| CRE-BET-2 protein [Caenorhabditis remanei]
Length = 1383
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 205 LMKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
K C LL + S F VF PVD +KL I DY VIK PMDL TIK K+ QY
Sbjct: 705 WQKFCVKLLNEMHSVKNKSFAQVFYVPVDPVKLKIVDYLEVIKEPMDLQTIKKKLDYKQY 764
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
+ F D+ L N TYNP + VH A L+ FE RWK
Sbjct: 765 TSGEEFERDMNLMIDNCCTYNPAGSAVHQNALDLKALFESRWK 807
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 188 RLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPM 247
R EP P G + L ++ + H+ W F PVD L IP+Y I PM
Sbjct: 380 RTEP--PPGKPTRHTNRLDYILFTVVKDALKHKHSWPFQAPVDAKSLQIPEYHNTIARPM 437
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTL 295
DL TI+ ++ + Y D++ FSN +NPP+ DV+ MA TL
Sbjct: 438 DLRTIEKRLRNTYYYCADDAIRDIKQMFSNCYMFNPPEYDVYKMAKTL 485
>gi|156030778|ref|XP_001584715.1| hypothetical protein SS1G_14328 [Sclerotinia sclerotiorum 1980]
gi|154700719|gb|EDO00458.1| hypothetical protein SS1G_14328 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE L + + F F TPVD + L IP+YFT+IK PMD+ T+ K+ +G Y+
Sbjct: 548 LKWCEETLNEMKKSKYLMFSSAFMTPVDPVALQIPNYFTIIKSPMDISTVSEKLQNGAYT 607
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF------EVRWKAIEKKLPVT 313
F DV+L F N +NP N V +M + F + RW A + + VT
Sbjct: 608 RAKEFEQDVKLIFQNCYKFNPEGNPVRVMGQQFEEVFNGLLAKKDRWIADHQPVAVT 664
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 222 GWVFNTPVDVMKLNIPD-YFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
G F +PV ++ D Y +K+ +DLGT++ KI +G+Y A D L + NA+
Sbjct: 361 GKNFRSPVAILWPGFADAYAQKVKNEVDLGTMEKKIKTGEYPSIQAIMDDAVLLYENAVA 420
Query: 281 YNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAV--PSRADDMIETETR 332
+N N + A+ ++ + ++ + P V V P R ++T R
Sbjct: 421 FNGLDNAITTAANDVKTSIITKLGSLPPEPPAHVAKAQVKKPKRPTPSLDTAAR 474
>gi|410912905|ref|XP_003969929.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Takifugu rubripes]
Length = 2168
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C LL L HQ W F TPV++ ++P Y VIK PMD TI+ K+ S QY + F
Sbjct: 2068 CRVLLAELERHQDAWPFLTPVNLK--SVPGYRKVIKKPMDFSTIREKLVSSQYQNLETFI 2125
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
DV L F N +N +D+ +RK+FE RW + K+
Sbjct: 2126 IDVNLVFDNCERFNEDNSDIGRAGHNMRKFFEKRWTELLKQ 2166
>gi|402218827|gb|EJT98902.1| Bromodomain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 824
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 160 PSVVLAPKGKKRAPNGRNGPQT-----KKGNSGRLEPKKPAGAASSSNAMLMKQCENLLT 214
P+ V+ PK + P R+ P KK SG+ + ++ +K C ++L
Sbjct: 395 PTAVVRPKREIHPPPSRDLPYIEAVPGKKRRSGKGKGRE----RDDGTQEQLKFCASVLQ 450
Query: 215 RLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
L + + F PVD + LNIPDY +IK PMDL T+K K+ S Y + F AD
Sbjct: 451 HLFKKSYYSAAYPFYDPVDYVALNIPDYPKIIKKPMDLSTMKKKLESKTYENAQEFHADF 510
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
+L N YNP Q+ V + L + F+ +WK +
Sbjct: 511 KLMIKNCRLYNPAQSPVREAGEELNRIFDEKWKGL 545
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 22/132 (16%)
Query: 199 SSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKIT- 257
S+ +A K + +L ++ F PVD + LNIP Y VIKHPMDLGT++ K+
Sbjct: 212 STFSAAQHKYAAATIRQLKKNRDAAPFLKPVDTVGLNIPHYHNVIKHPMDLGTVEEKLAL 271
Query: 258 -----------SGQYSDPLA-------FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
S SDP F ADVRL NA+ +N + H+++ ++
Sbjct: 272 SNPAVKSKQSGSATESDPSKRYWTADEFVADVRLIVDNAIKFN---GEAHVVSQMAKRLL 328
Query: 300 EVRWKAIEKKLP 311
E+ K E+ P
Sbjct: 329 EIFDKQAERMPP 340
>gi|47230592|emb|CAF99785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1679
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C LL L HQ W F TPV++ ++P Y VIK PMD TI+ K+ S QY + F
Sbjct: 1582 CRVLLAELERHQDAWPFLTPVNLK--SVPGYRKVIKKPMDFSTIREKLVSSQYQNLETFI 1639
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
DV L F N +N +D+ +RK+FE RW + K
Sbjct: 1640 IDVNLVFDNCERFNEDNSDIGRAGHNMRKFFEKRWTELLK 1679
>gi|151941931|gb|EDN60287.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
Length = 638
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L LMS + + F PVD + LN+P+YF V+K+PMDLGTI + + +Y
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH M L++ F W
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKNLKELFNFHW 423
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I+ K+ Y +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ + MA ++KYFE + A+
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|388853437|emb|CCF52836.1| related to TAF2-component of TFIID complex [Ustilago hordei]
Length = 1846
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
G AS + + C N L +LM ++ +F PVD ++ DYF +IK PMDLG+I K
Sbjct: 1221 GQASGMSFADLTACRNTLKKLMQNKHASIFLNPVDPVRDQATDYFDIIKEPMDLGSILNK 1280
Query: 256 ITSGQYSDPLAFAADVRLTFSNAMTYNP-PQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ SGQY D AD L SNA TY P P+ H A L K F W +EK L
Sbjct: 1281 LDSGQYKDRHELRADFELMISNAKTYTPDPKAWAHKQAVGLEKVFGPLWNRMEKTL 1336
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGT 251
+ P GA +++ + K+C+ +L + F F PVD ++ +P Y IK PMDL T
Sbjct: 1570 RDPVGA-TANMPINGKKCKVILQVIKKSPFSIFFRFPVDPIRDGLPTYLDEIKEPMDLST 1628
Query: 252 IKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ K+ YS FA+D+ L F+N +NPP + AD L K + W
Sbjct: 1629 TEKKVNQAAYSTMGEFASDIELIFANCRQFNPPGTEPCQHADELEKLWRKEW 1680
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAFAA 269
L+ RL +HQ +F PVD + L IP YF +I DL I+ K+ + +Y AF A
Sbjct: 1699 LVNRLKTHQSSLLFREPVDPVALGIPTYFDIIPKNDARDLSLIESKLKADKYDSFAAFDA 1758
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
D++L N T+N P V +A K FE +K
Sbjct: 1759 DIKLMLKNCYTFNAPDEGVLQIA----KGFETVYK 1789
>gi|326925069|ref|XP_003208744.1| PREDICTED: bromodomain testis-specific protein-like [Meleagris
gallopavo]
Length = 824
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 191 PKKPAGAASSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHP 246
P P S +N Q + L + + H F W F+ PVD LN+PDY+++IK P
Sbjct: 14 PPPPEYINSKNNGCQTNQLQYLQRVVMRAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKP 73
Query: 247 MDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
MDL TIK ++ Y+ D + F N YN P +D+ MA L K F
Sbjct: 74 MDLSTIKKRLEHNYYTKAAECIDDFKTMFLNCYIYNKPGDDIVFMAQELEKVF 126
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C +L + S + + W F DV+ ++ + + K P DLGTIK K+ + +Y
Sbjct: 284 LKYCNEILKEMFSKKHSAYAWPFLKSADVVSFSLGEKKGITKCPADLGTIKKKMDNFEYR 343
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
D FA DVRL F N +N P ++V MA L+ FE + I
Sbjct: 344 DIQEFATDVRLMFMNCYKHNSPDHEVVAMAKKLQDVFETHFAKI 387
>gi|365761633|gb|EHN03272.1| Bdf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L L S + + F PVD + LN+P+YF +IK+PMDLGTI + + +Y
Sbjct: 315 FRTCLKILRILGSKKNSDINFPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNLMNWKYK 374
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH+M L++ F V W
Sbjct: 375 TVDQFINDLNLVFLNCFQFNPEGNEVHLMGKKLKELFSVHW 415
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I K+ Y +D R +N +++N
Sbjct: 150 FLNPVDPIALNIPHYFNYVQTPMDLSLIGKKLQESTYHSVEQVKSDFRTMVNNCLSFNGL 209
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ V +MA ++ YFE + A+
Sbjct: 210 ESSVSLMAKRIQIYFERKLSAM 231
>gi|348516624|ref|XP_003445838.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Oreochromis niloticus]
Length = 2378
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C LL L HQ W F TPV++ ++P Y VIK PMD TI+ K+ S QY + F
Sbjct: 2278 CRVLLAELERHQDAWPFLTPVNLK--SVPGYRKVIKKPMDFSTIREKLVSSQYQNLETFI 2335
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
DV L F N +N +D+ +RK+FE RW + K+
Sbjct: 2336 IDVNLVFDNCEKFNEDNSDIGRAGHNMRKFFEKRWTELLKQ 2376
>gi|207346961|gb|EDZ73294.1| YDL070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 614
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L LMS + + F PVD + LN+P+YF V+K+PMDLGTI + + +Y
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH M L++ F W
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I+ K+ Y +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ + MA ++KYFE + A+
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|169624656|ref|XP_001805733.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
gi|111055843|gb|EAT76963.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
Length = 906
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 203 AMLMKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
A +K CE++L L+ ++ V F +PVD + LNIP Y +IK PMD GTI+ + +G
Sbjct: 542 AQELKFCESVLAELLKPKYAAVSYPFVSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKAG 601
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
Y F AD L F N +NP + V+ M L FE W+
Sbjct: 602 MYQSAKDFHADAHLVFQNCYKFNPEGDAVNKMGHDLEDIFEKLWR 646
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 173 PNGRNGPQTKKGNSGRLEPKKPAGAAS----SSNAMLMKQCENLLTRLMSHQ---FGWVF 225
PNG NG + G+S EP A + M Q + LL R+ + + F
Sbjct: 304 PNG-NGVSSAPGSSSAQEPSGVHNAVDFEEWPTTPMTSAQNKFLLERIRNTKKIKVSLAF 362
Query: 226 NTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQ 285
PVD + LNIP Y ++K PMDL T++ K+ +Y+ F AD+ N+ +N Q
Sbjct: 363 KDPVDHIALNIPTYPELVKKPMDLSTMENKLKENKYTYVREFMADLDQMIENSELFNNKQ 422
Query: 286 NDVHIMADTLRKYF 299
+ V LR YF
Sbjct: 423 HPVTQAGYNLRAYF 436
>gi|160333520|ref|NP_001103994.1| bromodomain containing 2b [Danio rerio]
gi|157280795|gb|ABV29330.1| truncated bromodomain-containing protein 2b [Danio rerio]
Length = 276
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
L+ L H F W F+ PVD +LN+PDY +IK PMD+GTIK ++ + Y D
Sbjct: 82 LVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYRGASECLQDF 141
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F+N YN P +D+ +MA +L K F
Sbjct: 142 NTMFTNCYIYNKPADDIVLMAQSLEKVF 169
>gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster]
Length = 3190
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD L IPDYF ++K PMDLGTI+ I +G+YSDP + DV L F NA YNP
Sbjct: 1723 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNPK 1782
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKKL 310
+ V+ L + FE + + L
Sbjct: 1783 TSRVYRYCTKLSEVFEAEIDPVMQAL 1808
>gi|297819940|ref|XP_002877853.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
gi|297323691|gb|EFH54112.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
Length = 371
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 15/232 (6%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---Y 261
LM+Q + ++ H+ W F PV+V L + DYF VI PMD TIK ++ + Y
Sbjct: 96 LMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGY 155
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMT---- 317
L AD+RL F NAM YN +DV+ MA L + FE +W K+ +
Sbjct: 156 KHVLQVYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEE 215
Query: 318 ------AVPSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTEL 371
A+ ++ I+T +G K + E R++ T EEKR + L
Sbjct: 216 KQAATEALLAKEASHIKTTRDLGNEICHANDELEKLMRKVVERCRKI-TIEEKRNIGLAL 274
Query: 372 EALLEELPESIIDFLKEHS-AGETGEDELEIDIDALSDDTLFALRKLLDDYL 422
L + + ++ + + + + +E+ I++D L + TL+ L+ + D L
Sbjct: 275 LKLSPDDLQKVLGIVAQADPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDAL 326
>gi|223365947|pdb|3G0L|A Chain A, Crystal Structure Of Human Bromodomain Adjacent To Zinc
Finger Domain 2b (Baz2b)
gi|320089945|pdb|3Q2F|A Chain A, Crystal Structure Of The Bromodomain Of Human Baz2b In
Complex With A Triazolo Ligand
gi|443428355|pdb|4IR3|A Chain A, Crystal Structure Of The Bromodomain Of Human Baz2b In
Complex With 1-
[7-amino-1-(pyrimidin-2-yl)indolizin-3-yl]ethanone
(gsk2833282a)
gi|443428356|pdb|4IR4|A Chain A, Crystal Structure Of The Bromodomain Of Human Baz2b In
Complex With 1-
[7-(morpholin-4-yl)-1-(pyridin-2-yl)indolizin-3-
yl]ethanone (gsk2834113a)
gi|443428357|pdb|4IR5|A Chain A, Crystal Structure Of The Bromodomain Of Human Baz2b In
Complex With 1-
{1-[2-(hydroxymethyl)phenyl]-7-phenoxyindolizin-3-
yl}ethanone (gsk2847449a)
gi|443428358|pdb|4IR6|A Chain A, Crystal Structure Of The Bromodomain Of Human Baz2b In
Complex With 1-
{1-[2-(methylsulfonyl)phenyl]-7-phenoxyindolizin-3-
yl}ethanone (gsk2838097a)
Length = 117
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 18 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 75
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 76 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 110
>gi|323349464|gb|EGA83688.1| Bdf2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 633
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L LMS + + F PVD + LN+P+YF V+K+PMDLGTI + + +Y
Sbjct: 318 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 377
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH M L++ F W
Sbjct: 378 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 418
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I+ K+ Y +D + N + +N P
Sbjct: 153 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 212
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ + MA ++KYFE + A+
Sbjct: 213 ESSISSMAKRIQKYFEKKLSAM 234
>gi|190405078|gb|EDV08345.1| hypothetical protein SCRG_00567 [Saccharomyces cerevisiae RM11-1a]
Length = 643
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L LMS + + F PVD + LN+P+YF V+K+PMDLGTI + + +Y
Sbjct: 328 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 387
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH M L++ F W
Sbjct: 388 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 428
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I+ K+ Y +D + N + +N P
Sbjct: 163 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 222
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ + MA ++KYFE + A+
Sbjct: 223 ESSISSMAKRIQKYFEKKLSAM 244
>gi|6320132|ref|NP_010213.1| Bdf2p [Saccharomyces cerevisiae S288c]
gi|74583636|sp|Q07442.1|BDF2_YEAST RecName: Full=Bromodomain-containing factor 2
gi|1431082|emb|CAA98636.1| BDF2 [Saccharomyces cerevisiae]
gi|285810964|tpg|DAA11788.1| TPA: Bdf2p [Saccharomyces cerevisiae S288c]
gi|392300048|gb|EIW11139.1| Bdf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 638
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L LMS + + F PVD + LN+P+YF V+K+PMDLGTI + + +Y
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH M L++ F W
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I+ K+ Y +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ + MA ++KYFE + A+
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|349577009|dbj|GAA22178.1| K7_Bdf2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 638
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L LMS + + F PVD + LN+P+YF V+K+PMDLGTI + + +Y
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH M L++ F W
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I+ K+ Y +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ + MA ++KYFE + A+
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|256274113|gb|EEU09024.1| Bdf2p [Saccharomyces cerevisiae JAY291]
Length = 638
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L LMS + + F PVD + LN+P+YF V+K+PMDLGTI + + +Y
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH M L++ F W
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I+ K+ Y +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ + MA ++KYFE + A+
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|452824080|gb|EME31085.1| bromodomain-containing protein 3 [Galdieria sulphuraria]
Length = 829
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLN--IPDYFTVIKHPMDLGTIKCKITSGQYS 262
L +C+N+L LM + F P+D + + IP YF ++KHPMDLGT+ ++ G Y
Sbjct: 374 LYFKCKNVLKSLMERKDARAFLKPIDELFTSEEIPGYFQIVKHPMDLGTVLYRMELGLYR 433
Query: 263 DPLA-------------FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKK 309
P F ADVRL + NAMTYN H A L + FE + +A +
Sbjct: 434 HPTVEELPKYPQFDLERFKADVRLVWENAMTYNLQGTPYHTTAAKLSETFERKLEATLRS 493
Query: 310 LPVT 313
LP T
Sbjct: 494 LPET 497
>gi|259145174|emb|CAY78438.1| Bdf2p [Saccharomyces cerevisiae EC1118]
Length = 638
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+ C +L LMS + + F PVD + LN+P+YF V+K+PMDLGTI + + +Y
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D+ L F N +NP N+VH M L++ F W
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP YF ++ PMDL I+ K+ Y +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 285 QNDVHIMADTLRKYFEVRWKAI 306
++ + MA ++KYFE + A+
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|84998542|ref|XP_953992.1| hypothetical protein [Theileria annulata]
gi|65304990|emb|CAI73315.1| hypothetical protein, conserved [Theileria annulata]
Length = 555
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 205 LMKQC----ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L+KQ NLL+ L+ + G+VF PVD K N PDY+ +IK PM ++ K+
Sbjct: 361 LLKQWYSLANNLLSTLLKQEGGYVFEKPVDPKKQNCPDYYDIIKKPMSFSCVRGKLRKNT 420
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
Y+DP F DV L F N YN P+ V + + LR +F+
Sbjct: 421 YTDPQQFVDDVLLIFDNCSKYNKPETWVATIGNNLRDFFQ 460
>gi|357616639|gb|EHJ70297.1| hypothetical protein KGM_09919 [Danaus plexippus]
Length = 1569
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
M+ C+NLL + H+ W F PV+ + P Y VIK PMDL TIK K+ Y
Sbjct: 1471 MQFCKNLLCEMECHEHAWPFLVPVNTKQF--PQYRKVIKSPMDLSTIKRKLHESGYKCKE 1528
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
FA+DVRL FSN +N ++ V +R++FE RW+
Sbjct: 1529 EFASDVRLIFSNCEVFNEDESPVGRAGHCMREFFERRWE 1567
>gi|407040562|gb|EKE40194.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 557
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 182 KKGNSGRLEPKKPAGAASSSNAMLMKQ----CENLLTRLMSHQFGWVFNTPVDVMKLNIP 237
K N ++ KK + S + M + C ++L +M++Q F T VD + LNI
Sbjct: 291 KSRNGKKISRKKEIDIEAVSGKLHMNKDLVICSSILGAIMNNQESEPFKTEVDPIALNIL 350
Query: 238 DYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRK 297
DY+ ++KHPMDL T+ K++ G Y F D++L F NA YN +N +H A L K
Sbjct: 351 DYYKIVKHPMDLETVSIKLSKGLYETKEDFKKDMKLIFENAKIYNSSENSIHQSAINLMK 410
Query: 298 YFEVRWKA--IEKKLP-------VTVDMTAVPSRADDMIETETRMGMPPMKKKKVSPKET 348
F+ + + +E P V+V T +P + E + +++ K
Sbjct: 411 KFDKMFNSAFLENNPPKLILPEQVSVTPTFLPVAVRPIYEHSNFYYCDEAEIEEMKEKMA 470
Query: 349 KIKAEPV-RRVMTNEEKRILSTELEALLEE---LPESIIDFLKEHSAGETGEDELEIDID 404
KI+ R+ MT +EK +L+ ++ + E L +++ KE G +EI+++
Sbjct: 471 KIRGTKYQRKKMTIKEKEVLTNQISKMSSERINLLFNVLGIFKE--PGRV----VEINLN 524
Query: 405 ALSDDTLFALRKLLD 419
++ L ++K+++
Sbjct: 525 DYDEEELINIKKIVN 539
>gi|58865638|ref|NP_001012031.1| bromodomain testis-specific protein [Rattus norvegicus]
gi|50927337|gb|AAH78999.1| Brdt protein [Rattus norvegicus]
gi|165971045|gb|AAI58631.1| Brdt protein [Rattus norvegicus]
Length = 326
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD KL +PDY+T+I+ PMDL TIK ++ + Y D
Sbjct: 38 VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDF 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN P +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKPGDDIVVMAQALEKLF 125
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
+K C +L +++ + + W F PVDV L + +Y+ ++K+PMDLGTIK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIK 322
>gi|67480061|ref|XP_655396.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56472529|gb|EAL50010.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449706339|gb|EMD46207.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 557
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 19/224 (8%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C ++L +M++Q F T VD + LNI DY+ ++KHPMDL T+ K++ G Y F
Sbjct: 322 CSSILGAIMNNQESEPFKTEVDPIALNILDYYKIVKHPMDLETVSIKLSKGLYKTKEDFK 381
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA--IEKKLP-------VTVDMTAV 319
D++L F NA YN +N +H A L K F+ + + +E P V+V T +
Sbjct: 382 KDMKLIFENAKIYNSSENSIHQSAINLMKKFDKMFNSAFLENNPPKLILPEQVSVTPTFL 441
Query: 320 PSRADDMIETETRMGMPPMKKKKVSPKETKIKAEPV-RRVMTNEEKRILSTELEALLEE- 377
P + E + +++ K KI+ R+ MT +EK +L+ ++ + E
Sbjct: 442 PVAVRPIYEHSNFYYCDEAEIEEMKEKMAKIRGTKYQRKQMTIKEKEVLTNQISKMSSER 501
Query: 378 --LPESIIDFLKEHSAGETGEDELEIDIDALSDDTLFALRKLLD 419
L +++ KE G +EI+++ ++ L ++K+++
Sbjct: 502 INLLFNVLGIFKE--PGRV----VEINLNDYDEEELINIKKIVN 539
>gi|432876083|ref|XP_004072968.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 494
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 206 MKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
++ +N++ + L HQF W F PVD +KL + DY VIK+PMD+GTIK ++ + Y
Sbjct: 36 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLWDYHKVIKNPMDMGTIKKRLENNYYWSA 95
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D F+N YN P +D+ +MA L K F
Sbjct: 96 SEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 130
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
K+ +YSDP +FA DVRL FSN YNPP ++V MA L+ FE+R+ I
Sbjct: 176 KMDKSEYSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 227
>gi|27503567|gb|AAH42646.1| Baz2b protein [Mus musculus]
Length = 131
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGT 251
KKP S A+ C +LT + +H+ W F PV+ +KL +P Y VIK PMD T
Sbjct: 19 KKPKKDESRDLAL----CSMILTEMETHEDSWPFLLPVN-LKL-VPGYKKVIKKPMDFST 72
Query: 252 IKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
I+ K+ +GQY + FA DVRL F N T+N +D+ ++RKYFE +W
Sbjct: 73 IREKLNNGQYPNFETFALDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 124
>gi|47201045|emb|CAF89147.1| unnamed protein product [Tetraodon nigroviridis]
Length = 378
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Query: 168 GKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWV 224
G++R +GR +KG +G P P +++ ++ C +L L+S + + W
Sbjct: 214 GERRGVSGRPIKPPQKGFTGL--PCWPRRCGAANLVPQLRYCNGVLKELLSKKHAGYAWP 271
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD L + DY +IK PMDL TIK K+ + +Y D FAADVRL FSN YNPP
Sbjct: 272 FYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYLDSQQFAADVRLMFSNCYKYNPP 331
>gi|402226160|gb|EJU06220.1| hypothetical protein DACRYDRAFT_112967 [Dacryopinax sp. DJM-731
SS1]
Length = 627
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 10/157 (6%)
Query: 150 KRPLLES-VGGP-SVVLAPKGKKRAPNGRNGPQTKKGNSGR----LEPKKPA--GAASSS 201
KR + ES +G P + L P K+R + T + +S L P+ P G AS++
Sbjct: 454 KRKVSESGLGSPVEIELEPPAKRRRKRSESFASTVEKSSPAPVVPLPPQAPMTPGQASAN 513
Query: 202 NAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
LLT++M+H+ G VFN PV + + P Y ++ PMDL TIK +I GQ
Sbjct: 514 LKRFQAMIGPLLTQIMAHRNGNVFNNPV--TESDAPGYRETVRRPMDLKTIKARIRDGQI 571
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKY 298
++ F DV L F+NA+ +NPP +DV MA + K+
Sbjct: 572 TNSQEFRRDVYLMFANALMFNPPGSDVAKMAREMMKF 608
>gi|403214547|emb|CCK69048.1| hypothetical protein KNAG_0B06180 [Kazachstania naganishii CBS
8797]
Length = 654
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C +++ L + + F + F PVD + +N+P YF +K PMDLGTI K+++ +Y
Sbjct: 289 MKYCVSVVKELTNKKYASFNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTISKKLSNWEYQ 348
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F AD+RL F N ++NP V++M L + F +W
Sbjct: 349 TMEEFEADIRLVFKNCYSFNPDGTIVNMMGHRLEEVFNSKW 389
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LN+P YF IK PMDL T++ K+ Y P + D L N + +N P
Sbjct: 139 FLQPVDTVALNLPLYFNYIKRPMDLSTVERKLNLNAYETPESVTEDFNLMVDNCVKFNGP 198
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA ++ FE
Sbjct: 199 ASAIAQMARNIQASFE 214
>gi|384499244|gb|EIE89735.1| hypothetical protein RO3G_14446 [Rhizopus delemar RA 99-880]
Length = 570
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMSHQFG---WVFNTPVDVMKLNIPDYFTVIKHPMD 248
K+P+ + + K C + + ++ W F PVD DY+ +I+HPMD
Sbjct: 140 KQPSTVTTLLSESEYKHCASAIKEFKKPKYAHLTWPFERPVDAAAWGATDYYDIIQHPMD 199
Query: 249 LGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIE- 307
+ TI+ K + +Y++ F D +L FSN YNPP ++VH++ + F+ W I
Sbjct: 200 MSTIENKFKNAEYTNEDQFYDDYKLMFSNCYKYNPPHHEVHLLGKKFEEDFDKHWNKIHD 259
Query: 308 -------KKLPVTVDMTAVPSRADDMIETE 330
KK V D+ P +D ++ +
Sbjct: 260 KPKERAVKKQRVDQDVMITPPTTEDEVQVK 289
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVR 272
LT+LM H F PVD + NIPDYF +IKHPMDL TI+ K+ + Q + F ADV
Sbjct: 44 LTKLMKHPCAGPFLQPVDPVFFNIPDYFDIIKHPMDLSTIQTKLNNYQSKE--EFIADVE 101
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYFEVRW--KAIEKKLPVTV 314
L N YN + V A L K F+ K + +K P TV
Sbjct: 102 LMLDNCYLYNNATDPVCDQARELEKAFKKHLAKKTVSEKQPSTV 145
>gi|189031512|gb|ACD74899.1| BDF2 [Pneumocystis carinii]
Length = 317
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
K ++L +L ++ FN PVD +KLNIP Y T+I HPMD GTI K++S QY
Sbjct: 175 YKYAISILRQLRRNRDARPFNQPVDPIKLNIPSYPTIITHPMDFGTIDKKLSSKQYETVD 234
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
F DV L F+N T+N ++ + IMA L+ F
Sbjct: 235 XFKKDVELVFTNCFTFNGEESPISIMARNLKNIF 268
>gi|333360985|pdb|2L5E|A Chain A, Complex Between Bd1 Of Brd3 And Gata-1 C-Tail
Length = 128
Score = 82.4 bits (202), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDL 249
P KP + M +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+
Sbjct: 10 PSKPGRKTNQLQYM-----QNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDM 64
Query: 250 GTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
GTIK ++ + Y D F+N YN P +D+ +MA L K F
Sbjct: 65 GTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 114
>gi|452847545|gb|EME49477.1| hypothetical protein DOTSEDRAFT_68295 [Dothistroma septosporum
NZE10]
Length = 859
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 206 MKQCENLLTRLMSHQFG---WVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE++L L S +FG VF TPVD + LNIP Y ++K+PMDL T+ K+ GQY
Sbjct: 487 LKFCEHILDELRSPKFGQVNHVFLTPVDPVALNIPHYRQIVKNPMDLSTMAQKLKQGQYG 546
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
F D L N + +NP N V + ++ F+ W+
Sbjct: 547 KANEFKKDFELMIQNCLAFNPAGNVVRDLGIQFKRNFDTLWQ 588
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIP Y +IK PMDL T++ K+ S QY++ FA D L SN +N
Sbjct: 310 FLHPVDHVALNIPTYPDIIKEPMDLNTMESKLKSNQYNNVQQFADDFDLIISNTRKFN-- 367
Query: 285 QNDVHI-------MADTLRKYFEVRWKAIEKKLP 311
D H+ M RK E A + LP
Sbjct: 368 -GDTHLITQAGFSMEAYFRKMMETVPSATQASLP 400
>gi|344231353|gb|EGV63235.1| Bromodomain-containing protein [Candida tenuis ATCC 10573]
Length = 503
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C +L L+S + + + F PVD + LNIP+Y +IK PMDL TI+ K+ + QY
Sbjct: 185 LRFCNQILKDLISKKHFSYNFPFLQPVDAVALNIPNYSDIIKQPMDLSTIQSKLANNQYE 244
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F +DV L F N +NP DV +M L+ F+ +W
Sbjct: 245 NGDEFESDVTLMFENCYKFNPEGTDVSMMGHKLQDIFQKKW 285
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD++KLNIP Y+ + PMDL TI+ K+T Y P F D L SN + +N
Sbjct: 45 FLKPVDIIKLNIPFYYNFVPKPMDLSTIEKKLTVSAYEVPEQFIDDFNLMVSNCIKFNGE 104
Query: 285 QNDVHIMADTLRKYFE 300
+ + M ++ YFE
Sbjct: 105 NSPIAKMGKNIQAYFE 120
>gi|15231174|ref|NP_190796.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|75172388|sp|Q9FT54.1|GTE6_ARATH RecName: Full=Transcription factor GTE6; AltName:
Full=Bromodomain-containing protein GTE6; AltName:
Full=Protein GENERAL TRANSCRIPTION FACTOR GROUP E6;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E6
gi|10045561|emb|CAC07919.1| putative protein [Arabidopsis thaliana]
gi|332645404|gb|AEE78925.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 369
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---Y 261
LM+Q + ++ H+ W F PV+V L + DYF VI PMD TIK ++ + Y
Sbjct: 94 LMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGY 153
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ AD+RL F NAM YN +DV+ MA L + FE +W
Sbjct: 154 KHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKW 195
>gi|363750698|ref|XP_003645566.1| hypothetical protein Ecym_3256 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889200|gb|AET38749.1| Hypothetical protein Ecym_3256 [Eremothecium cymbalariae
DBVPG#7215]
Length = 693
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ +L L + + F + F PVD + LN P YF +K PMDLGTI K+ + +Y
Sbjct: 301 MKFCQQVLKELTAKKHSSFNYPFLEPVDPVALNCPSYFDYVKEPMDLGTIGKKLGNWEYV 360
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
D F DVRL F N +NP V++M L F +W
Sbjct: 361 DYDQFERDVRLVFKNCYAFNPDGTLVNMMGHRLEDVFNSKW 401
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KLN+P+YF+ I+ PMDL TI+ K+ Y P A D L N +N P
Sbjct: 158 FLQPVDPVKLNVPNYFSHIQRPMDLSTIERKLVVNGYETPEQVAQDFNLMVDNCSKFNGP 217
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA ++ FE
Sbjct: 218 SSVIAQMARNIQASFE 233
>gi|428183174|gb|EKX52032.1| hypothetical protein GUITHDRAFT_43993, partial [Guillardia theta
CCMP2712]
Length = 89
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGT----IKCKITSGQYSDPLAF 267
++ +L H+F W F PVD ++LNIPDYF VIK+PMDL + + S S P ++
Sbjct: 1 IMKKLFKHKFSWPFLDPVDPVELNIPDYFEVIKNPMDLQEDIPFLYLLLHSCLTSSPFSY 60
Query: 268 AADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
V LTF NAM YNP N +H +A +RK+F
Sbjct: 61 ---VLLTFDNAMLYNPADNAIHQLAIKMRKFF 89
>gi|410075149|ref|XP_003955157.1| hypothetical protein KAFR_0A05870 [Kazachstania africana CBS 2517]
gi|372461739|emb|CCF56022.1| hypothetical protein KAFR_0A05870 [Kazachstania africana CBS 2517]
Length = 647
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 174 NGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVD 230
NGR + S + P + S MK C N++ L S + F + F PVD
Sbjct: 248 NGRPKREIHPPKSKDIYPYENPKPKSKKLQQAMKFCSNIVKELTSKKYSSFNYPFLEPVD 307
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
+ +N+P YF +K PMDLG+I K+++ +Y+ F +D+RL F+N +NP V++
Sbjct: 308 PVAMNLPTYFDFVKDPMDLGSIAKKLSNWEYNSMDQFESDIRLVFNNCYAFNPDGTIVNM 367
Query: 291 MADTLRKYFEVRW 303
M L + F +W
Sbjct: 368 MGHRLEEIFNNKW 380
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD++ LNIP Y+ I PMDL T++ K+ Y+ P D L N + +N
Sbjct: 128 FLKPVDIVALNIPLYYNYIDRPMDLSTMEKKLNVNAYATPEEIMNDFNLMVHNCIKFNGQ 187
Query: 285 QNDVHIMADTLRKYFEVRWKAI-EKKLPVTVDMTAVPSR----ADDMIET-------ETR 332
+ MA ++ FE + K+LPV+ T R DD+ +T +T
Sbjct: 188 TAAIAQMARNIQAAFEKHMLNMPAKELPVSNTQTKSRKRKNNGTDDVDDTPVIIRRAQTH 247
Query: 333 MGMP-----PMKKKKVSPKET-KIKAEPVRRVM 359
G P P K K + P E K K++ +++ M
Sbjct: 248 NGRPKREIHPPKSKDIYPYENPKPKSKKLQQAM 280
>gi|402087403|gb|EJT82301.1| hypothetical protein GGTG_02275 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 951
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS--HQ-FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ CE++L LM HQ W F PVD ++ YFT+I PMDLGTI+ K+ +G+Y+
Sbjct: 521 LRFCEDVLKELMKPKHQAINWPFLNPVDEVRDGAHGYFTMITDPMDLGTIQTKLNTGKYA 580
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F D L N +NP +V+ + L+ +F +W
Sbjct: 581 NAEGFRHDFNLMLDNCFIFNPAGTEVNNVGKNLQSWFNGKW 621
>gi|361126444|gb|EHK98445.1| putative Bromodomain-containing factor 1 [Glarea lozoyensis 74030]
Length = 824
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 194 PAGAASSSN---AMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPM 247
P AA N A ++ CE++L + + + F PVD + LNIP+YFT+IK+PM
Sbjct: 431 PYSAAKPKNKKVATELRFCEHVLNEMKKPKHSAYSLPFLEPVDPVALNIPNYFTIIKNPM 490
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DL T+ + +G Y F DVRL F+N +NP N V+ M F W
Sbjct: 491 DLQTVTSNLRNGVYPSAKEFERDVRLIFANCFKFNPANNPVNEMGKRFLDVFNHEW 546
>gi|159164344|pdb|2E7O|A Chain A, Solution Structure Of The Bromodomain From Human
Bromodomain Adjacent To Zinc Finger Domain 2b
Length = 112
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 209 CENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFA 268
C +LT + +H+ W F PV+ +KL +P Y VIK PMD TI+ K++SGQY + FA
Sbjct: 15 CSMILTEMETHEDAWPFLLPVN-LKL-VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFA 72
Query: 269 ADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
DVRL F N T+N +D+ +RKYFE +W
Sbjct: 73 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 107
>gi|195063000|ref|XP_001996295.1| GH22416 [Drosophila grimshawi]
gi|193899790|gb|EDV98656.1| GH22416 [Drosophila grimshawi]
Length = 291
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
++ L +H + + F PV+ KL +PDY +IK PMDL TIK ++ + Y AAD+
Sbjct: 36 VMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANNYYWSATEAAADI 95
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
L F+N YN P DV IMA L F
Sbjct: 96 NLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|393240985|gb|EJD48509.1| hypothetical protein AURDEDRAFT_112948 [Auricularia delicata
TFB-10046 SS5]
Length = 1830
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%)
Query: 193 KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
KP + +K C+N L RL ++ +F PVD ++ P+Y+ +IK PMDL T+
Sbjct: 1224 KPKAQTAGMPGTDVKACKNALHRLHQNKHSIIFRQPVDPVRDQAPNYYGIIKDPMDLSTM 1283
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPV 312
+ K+ +G Y D F AD +L NA TYN P + A L +FE W I L
Sbjct: 1284 RSKLDAGMYKDRFEFEADFKLMIENAKTYNQPGQFAYSEAVALEGFFEQAWVRINATLGA 1343
Query: 313 TVD 315
V+
Sbjct: 1344 IVN 1346
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLA 266
K+C LL L F PV+ + P Y+ IKHPMD T+ K+ +G+Y
Sbjct: 1593 KKCLELLKTLRKQPEALFFLLPVNPVLAGCPTYYDEIKHPMDFDTMGKKLDAGEYDSMED 1652
Query: 267 FAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
F +DV L F+N+ +NP H AD L K+F+ W I KL
Sbjct: 1653 FQSDVILIFNNSRQFNPVGTLPHDHADILEKFFKKEWSRIAGKL 1696
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAFAAD 270
+ +L + + + F PVD ++ NIP YF +I K DL TIK K+ +Y A AD
Sbjct: 1708 INKLKTEEISFYFREPVDPLRWNIPTYFQIIDPKKARDLSTIKSKLDKAEYETTAAVYAD 1767
Query: 271 VRLTFSNAMTYN 282
++L NA+ +N
Sbjct: 1768 IQLMVDNAIKFN 1779
>gi|403414886|emb|CCM01586.1| predicted protein [Fibroporia radiculosa]
Length = 743
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 192 KKPAGAASSSNAMLMKQCENLLTRLMS----HQFGWVFNTPVDVMKLNIPDYFTVIKHPM 247
++P A++ N ++ K+ +N++ L S H+ G +F+ P+ K+ PDY ++K PM
Sbjct: 618 RRPGRPAATDNPIVSKRFQNMIGMLHSQISQHRNGNIFHNPI--RKIEAPDYHDIVKRPM 675
Query: 248 DLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVR 302
DL TIK +I G S+ L F DV L F+NA+ YN P +++ MA+ + E++
Sbjct: 676 DLKTIKARIKDGLISNSLEFQRDVYLMFANAIMYNRPGSEISNMAEEMMLASEIQ 730
>gi|122921158|pdb|2NXB|A Chain A, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|122921159|pdb|2NXB|B Chain B, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|340708299|pdb|3S91|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 123
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDL 249
P KP + M +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+
Sbjct: 8 PSKPGRKTNQLQYM-----QNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDM 62
Query: 250 GTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
GTIK ++ + Y D F+N YN P +D+ +MA L K F
Sbjct: 63 GTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 112
>gi|195429272|ref|XP_002062687.1| GK19581 [Drosophila willistoni]
gi|194158772|gb|EDW73673.1| GK19581 [Drosophila willistoni]
Length = 293
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 201 SNAML-MKQCENLLTRLMS---HQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI 256
SN+++ + C+ LL LMS + W+F PVD L + DY ++K PMD GTIK ++
Sbjct: 10 SNSLVELNACKVLLKNLMSPTYKKLAWIFYEPVDPQTLGLDDYLEIVKEPMDFGTIKQRL 69
Query: 257 TSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
+ Y D + FA DVRL F NA Y + + MA L+ FE
Sbjct: 70 DADDYKDAMEFAKDVRLIFFNAYLYTNSDHVCYKMAKELQLIFE 113
>gi|71015037|ref|XP_758766.1| hypothetical protein UM02619.1 [Ustilago maydis 521]
gi|46098556|gb|EAK83789.1| hypothetical protein UM02619.1 [Ustilago maydis 521]
Length = 1846
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 196 GAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
G AS + + C N L +LM ++F +F PVD ++ +YF +IK PMDLG+I K
Sbjct: 1230 GQASGMSFADLTACRNTLKKLMQNKFAAIFLNPVDPVRDQATNYFDIIKEPMDLGSILNK 1289
Query: 256 ITSGQYSDPLAFAADVRLTFSNAMTYNP-PQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ SGQY D AD L SNA TY P + H A L K F W +EK L
Sbjct: 1290 LDSGQYKDRHELRADFELMISNAKTYTPDAKAWAHKQAVGLEKVFVPLWNRMEKTL 1345
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
P GA +++ A+ K+C+ LL L F PVD ++ +P Y I+ PMDL T++
Sbjct: 1586 PIGA-TAAMAVNSKKCKVLLQVLKKAPSSIFFRFPVDPIRDGLPTYLDEIQQPMDLSTME 1644
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW-KAIEKKL 310
K+ G Y+ FA+D+ L F+N +NPP + AD L + + W KA+ +L
Sbjct: 1645 KKVNQGAYTTMGEFASDMELIFANCRQFNPPGTEPCQHADELERLWRKEWAKAVTPRL 1702
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVI--KHPMDLGTIKCKITSGQYSDPLAFAA 269
L+ RL +HQ +F PVD + L IP YF VI K DL I+ K+ +Y A A
Sbjct: 1713 LMNRLKTHQSSLLFREPVDPVALGIPTYFDVIAKKDARDLSLIEAKLKGDKYDSFAALDA 1772
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
DV+L N T+N + +A Y++
Sbjct: 1773 DVKLMLRNCYTFNAADEAIVGIAKGFETYYK 1803
>gi|71033327|ref|XP_766305.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353262|gb|EAN34022.1| hypothetical protein TP01_0784 [Theileria parva]
Length = 551
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 205 LMKQC----ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ 260
L+KQ +NLL+ L G+VF PVD K N PDY+ +IK PM I+ K+
Sbjct: 353 LLKQWYSLAQNLLSTLFKQDGGYVFEKPVDAKKQNCPDYYDIIKKPMSFSCIRGKLRKNT 412
Query: 261 YSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
Y+DP F DV L F N YN P+ + + + LR +F+
Sbjct: 413 YTDPQQFIDDVLLIFDNCSKYNKPETWIATVGNRLRDFFK 452
>gi|302658444|ref|XP_003020926.1| transcription regulator BDF1, putative [Trichophyton verrucosum HKI
0517]
gi|291184796|gb|EFE40308.1| transcription regulator BDF1, putative [Trichophyton verrucosum HKI
0517]
Length = 916
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L L H++ F PVD + LNIP Y VIK PMDL T++ K++ GQY
Sbjct: 556 LKFCQEVLNELHKHKYYAHASFFYFPVDPVALNIPSYHNVIKKPMDLQTMQKKLSEGQYE 615
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F AD+RL F N +N + V+ T F+ +W
Sbjct: 616 NAKEFEADMRLIFKNCYKFNIVGDPVYSAGKTTEATFDAKW 656
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTY 281
G +F PVD++KLNIP Y+ +KHPMDL T++ K+ S QY D L +N+ T+
Sbjct: 358 GQMFKAPVDIVKLNIPTYYDFVKHPMDLLTMEGKLKSEQYRTLQDVINDFELMVNNSKTF 417
Query: 282 NPPQNDVHIMADTLRKYFEVRWKAI 306
N P + V + D L ++F+ K +
Sbjct: 418 NGPAHVVSLAGDRLYEHFQKHLKKL 442
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 350 IKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEH--SAGETGEDELEIDIDALS 407
+K E R +T EEK ++S + +L E + + +++H S GED++E+DID L
Sbjct: 755 VKGEKGGRWVTYEEKSLISNGISSLSENRMQEALAIIQKHVPSLRGVGEDDIELDIDELP 814
Query: 408 DDTLFALRKLLDDY 421
+ L L K + +
Sbjct: 815 NHVLVILLKFVKKH 828
>gi|302496079|ref|XP_003010044.1| transcription regulator BDF1, putative [Arthroderma benhamiae CBS
112371]
gi|291173579|gb|EFE29404.1| transcription regulator BDF1, putative [Arthroderma benhamiae CBS
112371]
Length = 916
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQF---GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L L H++ F PVD + LNIP Y VIK PMDL T++ K++ GQY
Sbjct: 556 LKFCQEVLNELHKHKYYAHASFFYFPVDPVALNIPSYHNVIKKPMDLQTMQKKLSEGQYE 615
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F AD+RL F N +N + V+ T F+ +W
Sbjct: 616 NAKEFEADMRLIFKNCYKFNIVGDPVYSAGKTTEATFDAKW 656
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTY 281
G +F PVD++KLNIP Y+ +KHPMDL T++ K+ S QY D L +N+ T+
Sbjct: 358 GQMFKAPVDIVKLNIPTYYDFVKHPMDLQTMEGKLKSEQYRTLQDVINDFELMVNNSKTF 417
Query: 282 NPPQNDVHIMADTLRKYFEVRWKAI 306
N P + V + D L ++F+ K +
Sbjct: 418 NGPAHVVSLAGDRLYEHFQKHLKKL 442
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 350 IKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFLKEH--SAGETGEDELEIDIDALS 407
+K E R +T EEK ++S + +L E + + +++H S GED++E+DID L
Sbjct: 755 VKGEKGGRWVTYEEKSLISNGISSLSENRMQEALAIIQKHVPSLRGVGEDDIELDIDELP 814
Query: 408 DDTLFALRKLLDDY 421
+ L L K + +
Sbjct: 815 NHVLVILLKFVKKH 828
>gi|121707746|ref|XP_001271928.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
gi|119400076|gb|EAW10502.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
Length = 840
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQF-GWV--FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+ +L L +F W F PVD + LNIP Y ++IK PMDL T++ K+ +GQY
Sbjct: 483 LRFCQEVLDELHKPKFYTWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 542
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F DVR F N +N P + ++ ++ FE +W
Sbjct: 543 NAKEFEVDVRQIFKNCFKFNIPGDPTYMAGQRFQEIFENKW 583
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 199 SSSNAMLMKQCENLLTRLMSHQF-------------GWVFNTPVDVMKLNIPDYFTVIKH 245
+ S+A L+ E +T++ H+F F PVD +K+NIP Y +IKH
Sbjct: 270 TKSSAKLVSNGEAAMTKVQ-HKFLLKGIQSLKRMNDARFFREPVDPIKMNIPHYPQIIKH 328
Query: 246 PMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
PMDLGTI+ K+ + +Y A D L NA+T+N P + V L+ FE
Sbjct: 329 PMDLGTIERKLKNNEYKAAQAVVNDFHLMVQNAVTFNGPDHLVSQEGMKLQGTFE 383
>gi|334185931|ref|NP_001190072.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|332645405|gb|AEE78926.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQ---Y 261
LM+Q + ++ H+ W F PV+V L + DYF VI PMD TIK ++ + Y
Sbjct: 111 LMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGY 170
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ AD+RL F NAM YN +DV+ MA L + FE +W
Sbjct: 171 KHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKW 212
>gi|341892468|gb|EGT48403.1| hypothetical protein CAEBREN_29751 [Caenorhabditis brenneri]
Length = 283
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 228 PVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQND 287
PVD KL + DY +IK P+DL TI+ K+ +G Y +P FA D+RL +N YNP +
Sbjct: 3 PVDAEKLGLHDYHKIIKEPIDLKTIRTKMDTGVYKEPADFAHDIRLMLNNCFLYNPVGDP 62
Query: 288 VHIMADTLRKYFEVRWKAIE 307
VHI ++ FE RW +E
Sbjct: 63 VHIFGMKFKEVFEKRWAELE 82
>gi|378734234|gb|EHY60693.1| bromodomain-containing protein [Exophiala dermatitidis NIH/UT8656]
Length = 968
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 204 MLMKQCENLLTRLMSHQFGW----VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG 259
+ +K C+ +L L + ++ W F PVD + LNIP YF +IK PMDLGTI+ K+ +
Sbjct: 607 LQLKFCDEVLKELTATKY-WPINQYFTHPVDPVALNIPTYFQIIKKPMDLGTIRTKLNNN 665
Query: 260 QYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
Y F DVRL F N +NP + V+ L + F +W
Sbjct: 666 VYEKAKDFEEDVRLVFKNCYKFNPEGDLVNSAGHQLEELFNKKW 709
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%)
Query: 206 MKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPL 265
+ + +++ L F PVD + LNIP YF VIKHPMDLGTI ++ +Y+
Sbjct: 406 LAHMKKVISNLKKSNASAAFRLPVDPVALNIPTYFEVIKHPMDLGTIDQRLKRNEYTSVA 465
Query: 266 AFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
AF +D L N + +N P + V A ++ F + + + K
Sbjct: 466 AFISDFELIVDNCVKFNGPDHGVTQAARKMQSSFNSQMRNLPK 508
>gi|365991080|ref|XP_003672369.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
gi|343771144|emb|CCD27126.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
Length = 733
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+++L L + + F + F PVD + LN+P Y+ +K PMDLGTI K+ + +Y
Sbjct: 358 MKFCQSILKELTNKKHASFNYPFLEPVDPVALNLPTYYDYVKEPMDLGTISKKLNNWEYE 417
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F DVRL F N +NP V++M L + F +W
Sbjct: 418 TMDQFGDDVRLVFKNCYAFNPDGTIVNMMGHRLEEVFNNKW 458
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD++ LNIP Y+ + PMDL TI+ K+ YS+P D L +N++ +N P
Sbjct: 204 FLKPVDIVALNIPFYYNYVPRPMDLSTIEKKLNVNAYSEPEQITDDFNLMVNNSIKFNGP 263
Query: 285 QNDVHIMADTLRKYFE 300
+ MA ++ FE
Sbjct: 264 TAVISQMARNIQAAFE 279
>gi|326426578|gb|EGD72148.1| CBP-A protein [Salpingoeca sp. ATCC 50818]
Length = 2186
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
L+ L ++ SH+ F PVD + LN DY+ +IK PMDLGTI K+ +G Y DP
Sbjct: 983 LLHHFWPLHEKIRSHEDSHPFLEPVDTVALNCSDYYDIIKQPMDLGTIGKKLKAGDYKDP 1042
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
+ D+RL F NA TYN ++ V MA TL + + I K++
Sbjct: 1043 WEYCDDMRLMFRNAFTYNGEKSIVGKMAKTLFNLWNAEIEPIMKRM 1088
>gi|154299583|ref|XP_001550210.1| hypothetical protein BC1G_10754 [Botryotinia fuckeliana B05.10]
Length = 931
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE L L + F F PVD + L IP+YFTVIK PMD+ T+ K+ +G Y+
Sbjct: 550 LKWCEETLNELKKPKYLAFSGAFMDPVDPVALQIPNYFTVIKSPMDISTVSEKLQNGAYT 609
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF------EVRWKAIEKKLPVTVD 315
F DV+L F N +NP N V +M F + RW A + + VT D
Sbjct: 610 RAKEFEQDVKLIFHNCYKFNPEGNPVRLMGRQFEDVFNGLLARKDRWIADHQPVAVTPD 668
>gi|347827938|emb|CCD43635.1| hypothetical protein [Botryotinia fuckeliana]
Length = 931
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE L L + F F PVD + L IP+YFTVIK PMD+ T+ K+ +G Y+
Sbjct: 550 LKWCEETLNELKKPKYLAFSGAFMDPVDPVALQIPNYFTVIKSPMDISTVSEKLQNGAYT 609
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF------EVRWKAIEKKLPVTVD 315
F DV+L F N +NP N V +M F + RW A + + VT D
Sbjct: 610 RAKEFEQDVKLIFHNCYKFNPEGNPVRLMGRQFEDVFNGLLARKDRWIADHQPVAVTPD 668
>gi|195062991|ref|XP_001996293.1| GH22415 [Drosophila grimshawi]
gi|193899788|gb|EDV98654.1| GH22415 [Drosophila grimshawi]
Length = 309
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ ++ L +H + + F PV+ KL +PDY +IK PMDL TIK ++ + Y AA
Sbjct: 34 KTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANSYYWSATEAAA 93
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D+ L F+N YN P DV IMA L F
Sbjct: 94 DINLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|242769778|ref|XP_002341843.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
gi|218725039|gb|EED24456.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
Length = 798
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 206 MKQCENLLTRLMSHQFGWV----FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQY 261
+K C+ +L + ++ W F PVD + LNIP Y +VIK PMDL TI+ K+ +GQY
Sbjct: 454 LKFCQEILDEVHKPKY-WAIANPFYYPVDPVALNIPTYHSVIKKPMDLSTIQVKLKAGQY 512
Query: 262 SDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F ADVRL N +N P + ++ + F +W
Sbjct: 513 ENAKEFEADVRLMLKNCFKFNIPGDPIYQAGQKFEEVFNSKW 554
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 22/155 (14%)
Query: 205 LMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDP 264
+ +C L R +F + PVD +KLNIP YFTVI PMDL TI+ K+ QY+
Sbjct: 265 FLVKCLTNLKRSNDSRF---YREPVDPIKLNIPTYFTVITEPMDLSTIESKLKKNQYNTV 321
Query: 265 LAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSRAD 324
ADV L NA +N P++ V L+ F + +KLP
Sbjct: 322 AEVIADVDLMAGNAAKFNGPEHIVSQEGQKLKALFRKQL----QKLP-----------GP 366
Query: 325 DMIETE--TRMGMPPMKKKKVSPKETKIKAEPVRR 357
D +E + + +PP K+ S +E+++ A+PV +
Sbjct: 367 DEVEEKKPKKAALPP--KESASRRESRVVAQPVPK 399
>gi|195063016|ref|XP_001996299.1| GH22418 [Drosophila grimshawi]
gi|193899794|gb|EDV98660.1| GH22418 [Drosophila grimshawi]
Length = 309
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 210 ENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
+ ++ L +H + + F PV+ KL +PDY +IK PMDL TIK ++ + Y AA
Sbjct: 34 KTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANSYYWSATEAAA 93
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
D+ L F+N YN P DV IMA L F
Sbjct: 94 DINLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|389751720|gb|EIM92793.1| Bromodomain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 196 GAASSSNAMLMKQCENLLTRL---MSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
G+ ++ A +K C +L +L H F PVD + L IPDY +IK PMDL T+
Sbjct: 420 GSKGTNGAEQLKHCGKILDQLGRKSHHTIVAPFAQPVDPISLGIPDYPKIIKKPMDLSTM 479
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ K+ SGQY+ F D +L SN YN + VH L+K FE +W
Sbjct: 480 RTKLESGQYASADRFRDDFKLMISNCFAYNSDTSPVHKAGVELQKLFEEKW 530
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKI------------TSGQYSDPLAFAADVR 272
F PVD + LNIP Y VIK PMD TI+ K+ T +Y + F DVR
Sbjct: 243 FKFPVDPLALNIPHYPQVIKEPMDFSTIERKLASSNPVKPDPDPTHARYYNAEEFITDVR 302
Query: 273 LTFSNAMTYNPPQNDV 288
F N +T+N P + +
Sbjct: 303 RIFQNCLTFNGPDHAI 318
>gi|324504882|gb|ADY42105.1| Homeotic protein female sterile [Ascaris suum]
Length = 696
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 182 KKGNSGRLEPK--KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDY 239
+K G ++P+ P G + L +N+L L HQ W F +PVD +KLNIPDY
Sbjct: 68 QKAVRGVVQPRVFPPLGKPTRHTNQLQFMQKNVLDPLTRHQHAWPFISPVDAVKLNIPDY 127
Query: 240 FTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
V+K PMDL TI ++ + Y D F+N YN ++DV +M + +
Sbjct: 128 HNVVKRPMDLNTIGKRLQNSYYFSAEECMHDFETIFANCYEYNRKEDDVWLMCKNIENEY 187
Query: 300 EVRWK-----------AIEKKLPV 312
+ K ++ K+LPV
Sbjct: 188 REKLKLLPTPEVELTRSVAKRLPV 211
>gi|348684152|gb|EGZ23967.1| hypothetical protein PHYSODRAFT_325128 [Phytophthora sojae]
Length = 823
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 212 LLTRLMSHQ--FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAA 269
++++LM H+ G+ FN VD + NIP Y V+KHPMDL +K K + +Y A A
Sbjct: 136 IVSKLMFHKGNHGF-FNVRVDPVVWNIPHYLEVVKHPMDLALVKNKCLNLEYPTADACAE 194
Query: 270 DVRLTFSNAMTYNPPQNDVHIMADTLRKYFE---VRWKA 305
D+RL FSNA +NPP + VH A LRK FE V++KA
Sbjct: 195 DIRLVFSNACLFNPPGHIVHEAAAMLRKEFEADFVKYKA 233
>gi|159794742|pdb|2DWW|A Chain A, Crystal Structure Of Bromodomain-Containing Protein 4
Length = 114
Score = 81.3 bits (199), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 199 SSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCK 255
SS + +K C +L + + + W F PVDV L + DY +IKHP D TIK K
Sbjct: 2 SSKISEQLKCCSGILKEXFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPXDXSTIKSK 61
Query: 256 ITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ S +Y D F ADVRL FSN YNPP ++V A L+ FE R+
Sbjct: 62 LESREYRDAQEFGADVRLXFSNCYKYNPPDHEVVAXARKLQDVFEXRF 109
>gi|444314575|ref|XP_004177945.1| hypothetical protein TBLA_0A06350 [Tetrapisispora blattae CBS 6284]
gi|387510984|emb|CCH58426.1| hypothetical protein TBLA_0A06350 [Tetrapisispora blattae CBS 6284]
Length = 855
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 184 GNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYF 240
NS R PK S +MK C++++ L S + F + F PVD ++ NIP YF
Sbjct: 353 SNSNRKPPK------SKKLKQVMKFCQSIVKELSSKKYSSFNYPFLVPVDPVEQNIPTYF 406
Query: 241 TVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
IK PMDL TI K+ + +Y P D+ L F N +NP V++M L+ F
Sbjct: 407 DYIKEPMDLSTISKKLINWEYKTPEEVEYDINLIFKNCYIFNPEGTIVNMMGHRLQDIFN 466
Query: 301 VRW 303
+W
Sbjct: 467 TKW 469
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LN+P Y+ IKHPMDL TI+ K+T Y + D L +N + +N P
Sbjct: 208 FLNPVDPVALNVPFYYNKIKHPMDLNTIERKLTLNAYDVIESLTEDFNLMVNNCILFNGP 267
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA ++ FE
Sbjct: 268 TSSISQMAKNIQASFE 283
>gi|185177636|pdb|2YW5|A Chain A, Solution Structure Of The Bromodomain From Human
Bromodomain Containing Protein 3
Length = 138
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTR-LMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDL 249
P KP + M +N++ + L HQF W F PVD +KLN+PDY +IK+PMD+
Sbjct: 12 PSKPGRKTNQLQYM-----QNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDM 66
Query: 250 GTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
GTIK ++ + Y D F+N YN P +D+ +MA L K F
Sbjct: 67 GTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 116
>gi|323447957|gb|EGB03862.1| hypothetical protein AURANDRAFT_55416 [Aureococcus anophagefferens]
Length = 628
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 211 NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAAD 270
NLL ++ + F PVD L + DY V+K PMDLGT++ ++ G Y++P D
Sbjct: 319 NLLKHVVQQPSSYPFMAPVDAEALGLADYHDVVKAPMDLGTVERRLGGGSYANPQKLVDD 378
Query: 271 VRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKL 310
VRLTF+NA YNPP + VH A L FE + + + ++L
Sbjct: 379 VRLTFANAQKYNPPAHPVHEAATHLGCVFEKKLQNLLQRL 418
>gi|302789912|ref|XP_002976724.1| hypothetical protein SELMODRAFT_28942 [Selaginella moellendorffii]
gi|300155762|gb|EFJ22393.1| hypothetical protein SELMODRAFT_28942 [Selaginella moellendorffii]
Length = 96
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%)
Query: 222 GWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTY 281
GWVF PV + + DY VI+ PMDLGT+K ++ S YS P FA DVRLTF NA+ +
Sbjct: 12 GWVFCQPVQSLWPELVDYTKVIEKPMDLGTVKSRVQSKYYSSPKGFARDVRLTFDNAIRF 71
Query: 282 NPPQNDVHIMADTLRKYFEVRWKAI 306
N + H +A +R+ FE +KA+
Sbjct: 72 NAAGSMYHKLALKMRQKFETAFKAV 96
>gi|425766265|gb|EKV04889.1| hypothetical protein PDIG_86900 [Penicillium digitatum PHI26]
gi|425778995|gb|EKV17090.1| hypothetical protein PDIP_32890 [Penicillium digitatum Pd1]
Length = 807
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSH-QFGWV--FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+ +L L + WV F PVD + LNIP Y +VIK PMDL T + K+ +GQY
Sbjct: 459 LRFCQEVLDELHKQKHYSWVMPFYYPVDPVALNIPTYHSVIKKPMDLSTAQSKLKTGQYE 518
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F DVRL F N +N P + I + F +W
Sbjct: 519 NAKEFENDVRLIFKNCYRFNIPGDPTFICGQRAEEIFNAKW 559
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVR 272
LT L + PVD +K+NIP Y ++I HPMDLGT++ K+ + QYS P A A D
Sbjct: 276 LTSLKRMHDARFYKEPVDAVKMNIPQYHSIITHPMDLGTMERKLKNNQYSSPKAVADDFA 335
Query: 273 LTFSNAMTYN 282
L +N +N
Sbjct: 336 LMVNNTTIFN 345
>gi|397640630|gb|EJK74224.1| hypothetical protein THAOC_04109 [Thalassiosira oceanica]
Length = 824
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 67/114 (58%)
Query: 193 KPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTI 252
K AG S++ ++ + L+ +++ H+ GW+F VD ++L + DYF VI+ PMDL +
Sbjct: 708 KQAGKESANQQWMIDKYFPLVRKMIEHENGWLFKDAVDPVELGLVDYFDVIETPMDLSLV 767
Query: 253 KCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAI 306
+ K+ G Y F +DV+L F+NA+ +N ++DV ++A + F +K +
Sbjct: 768 EKKLKQGCYKSEAMFESDVKLVFNNAIVFNGEESDVGVIAKEMLGLFSSHFKNL 821
>gi|212542081|ref|XP_002151195.1| transcription regulator BDF1, putative [Talaromyces marneffei ATCC
18224]
gi|210066102|gb|EEA20195.1| transcription regulator BDF1, putative [Talaromyces marneffei ATCC
18224]
Length = 779
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 206 MKQCENLLTRLMSHQFGWV---FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ +L L ++ V F PVD + LNIP Y +VIK PMDL T++ K+ +GQY
Sbjct: 438 LKFCQEILDELHKPKYWAVASPFYFPVDPVALNIPTYHSVIKKPMDLYTVQTKLKAGQYE 497
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKA 305
+ F AD+RL N +N P + ++ + F +W A
Sbjct: 498 NAKEFEADIRLMLKNCFKFNIPGDPTYVAGQKCEEVFNNKWAA 540
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 194 PAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIK 253
P G + L KQ NL R +F + PVD +KLNIP YFT+I PMDL TI+
Sbjct: 239 PTGITPLQHKFLAKQLTNL-KRSNDARF---YREPVDPIKLNIPSYFTIITEPMDLSTIE 294
Query: 254 CKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
K+ QY+ ADV L NA +N P HI+A +K + K +EK
Sbjct: 295 SKLKKNQYNAVAEIVADVDLMAGNAAKFNGPD---HIVAQEGQKLRALFAKQLEK 346
>gi|260785490|ref|XP_002587794.1| hypothetical protein BRAFLDRAFT_126580 [Branchiostoma floridae]
gi|229272947|gb|EEN43805.1| hypothetical protein BRAFLDRAFT_126580 [Branchiostoma floridae]
Length = 3563
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 45/76 (59%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD L IPDYF ++KHPMDL TIK K+ +GQY DP + DV L F NA YN
Sbjct: 2279 FRQPVDPKLLGIPDYFDIVKHPMDLSTIKRKLDTGQYKDPWEYCDDVWLMFDNAWLYNRK 2338
Query: 285 QNDVHIMADTLRKYFE 300
+ V+ L + FE
Sbjct: 2339 TSRVYKYCSKLAEVFE 2354
>gi|159795469|pdb|2RFJ|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795470|pdb|2RFJ|B Chain B, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795471|pdb|2RFJ|C Chain C, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|394986421|pdb|4FLP|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
gi|394986422|pdb|4FLP|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
Length = 119
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 199 SSSNAMLMKQCENL----LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
+ N L Q + L L L H F W F PVD +KL +PDY+T+IK+PMDL TIK
Sbjct: 4 TKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKK 63
Query: 255 KITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYF 299
++ + Y+ D FSN YN P +D+ +MA L K F
Sbjct: 64 RLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 108
>gi|453088461|gb|EMF16501.1| Bromodomain-containing protein [Mycosphaerella populorum SO2202]
Length = 887
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 206 MKQCENLLTRLMSHQFG---WVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K E++L ++ ++ VF TPVD + LNIP Y ++K+PMDLGT+ K+ +GQYS
Sbjct: 521 LKFAEDVLDKIRGPKYAALATVFLTPVDPVALNIPHYRQIVKNPMDLGTMTQKLKNGQYS 580
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEK 308
D L SN + +NP N V M L++ FE W+ EK
Sbjct: 581 RASEVKKDFDLMISNCLAFNPNGNPVRDMGIQLQREFESLWREKEK 626
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%)
Query: 229 VDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDV 288
VD + LNIP Y +IKHPMDLGT++ K+ G+Y FA D L N T+N P + V
Sbjct: 353 VDPIALNIPSYTEIIKHPMDLGTMEQKLKGGKYGTVQDFADDFNLIIHNTQTFNGPGHAV 412
Query: 289 HIMADTLRKYF 299
+ YF
Sbjct: 413 TQAGMAMEAYF 423
>gi|255714130|ref|XP_002553347.1| KLTH0D14652p [Lachancea thermotolerans]
gi|238934727|emb|CAR22909.1| KLTH0D14652p [Lachancea thermotolerans CBS 6340]
Length = 634
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 174 NGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ---FGWVFNTPVD 230
NGR + S + P + A S + +K + ++ LMS + F + F PVD
Sbjct: 234 NGRPKREIHPPRSKDIYPYETAKPRSKKHQGELKFAQQVVKELMSKKYSSFNYPFLEPVD 293
Query: 231 VMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHI 290
+ LN P YF +K PMDLGT+ K+ + +Y + D+RL F N +NP V++
Sbjct: 294 PVALNCPTYFDYVKEPMDLGTVSRKLNNWEYENADQVEVDIRLVFKNCYAFNPDGTIVNM 353
Query: 291 MADTLRKYFEVRW 303
M L F RW
Sbjct: 354 MGHRLEDVFNTRW 366
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LN+P Y+ IK PMDL TI+ K+T+ Y+ P +AD +L N +N
Sbjct: 122 FLQPVDPVALNVPLYYNYIKRPMDLSTIERKLTANAYAQPEEVSADFKLMVENCARFNGE 181
Query: 285 QNDVHIMADTLRKYFE 300
+ + M + FE
Sbjct: 182 SSAIAQMGRNIEASFE 197
>gi|398411857|ref|XP_003857263.1| transcription initiation factor [Zymoseptoria tritici IPO323]
gi|339477148|gb|EGP92239.1| transcription initiation factor [Zymoseptoria tritici IPO323]
Length = 899
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 206 MKQCENLLTRLMSHQFGW---VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K E++L ++ Q+G VF PVD + LNIP+Y +IKHPMDLGT+ K+ G Y
Sbjct: 529 LKFAEHVLQQIRGPQYGAQNSVFLAPVDPVALNIPNYRQIIKHPMDLGTMTQKMKQGLYG 588
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWK 304
D L N +++NP N V M L++ FE W+
Sbjct: 589 KASEVKKDFDLMIENCISFNPVGNPVRDMGIALQRSFESLWR 630
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F++PVD + L IP Y VIK PMDLGT+ K+ +GQY+ FA D L +N T+N
Sbjct: 363 FSSPVDYVALGIPSYPEVIKQPMDLGTMDQKLKAGQYATVQEFADDFDLIVNNTRTFNGS 422
Query: 285 QNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
+ + MA + YF +++ + D+ A+P +
Sbjct: 423 AHAITQMAMAMEAYFRRMMESVP-----SADIAALPKK 455
>gi|120431733|ref|NP_001073342.1| bromodomain testis-specific protein isoform B [Mus musculus]
Length = 326
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD +KL +PDY+T+IK PMDL TIK ++ + Y D
Sbjct: 38 VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDF 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKTGDDIVVMAQALEKLF 125
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
+K C +L +++ + + W F PVD L + +Y+ V+K+PMDLGTIK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKV 323
>gi|242208445|ref|XP_002470073.1| predicted protein [Postia placenta Mad-698-R]
gi|220730825|gb|EED84676.1| predicted protein [Postia placenta Mad-698-R]
Length = 483
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 165 APKGKKRAPNGRNGPQTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMS----HQ 220
A + KKR G + + G S + ++P + + K+ + ++T + S H+
Sbjct: 327 AQRDKKRLREGSEATEEEPGPSTAPKGRRPGRPPAVDTPPVSKRFQTMITMVHSQISQHR 386
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
+G +F+ P+ K+ DY ++K PMDL TIK +I G S L F DV L F+NAM
Sbjct: 387 YGTIFHNPI--RKVEASDYHDIVKRPMDLKTIKARIKDGLISSSLEFQRDVYLMFANAMM 444
Query: 281 YNPPQNDVHIMADTL 295
YN P ++++ MA+ +
Sbjct: 445 YNRPGSEIYNMAEEM 459
>gi|62086391|dbj|BAD91553.1| bromodomain-containing protein [Mus musculus]
Length = 326
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 212 LLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADV 271
+L L H F W F PVD +KL +PDY+T+IK PMDL TIK ++ + Y D
Sbjct: 38 VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDF 97
Query: 272 RLTFSNAMTYNPPQNDVHIMADTLRKYF 299
FSN YN +D+ +MA L K F
Sbjct: 98 NTMFSNCYLYNKTGDDIVVMAQALEKLF 125
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKC 254
+K C +L +++ + + W F PVD L + +Y+ V+K+PMDLGTIK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKV 323
>gi|303281032|ref|XP_003059808.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226458463|gb|EEH55760.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 129
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 183 KGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMS-HQFGWVFNTPVDVMKLNIPDYFT 241
K + + E KP +S + CE LL RLM + W F PVD + L IPDY
Sbjct: 6 KSHGAQAEWNKPL---TSCARQWQRACEKLLHRLMQDKKKSWCFKEPVDPVGLGIPDYPV 62
Query: 242 VIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYN 282
+IKHPMDLGTI+ + G+ S P F A VR F NA YN
Sbjct: 63 IIKHPMDLGTIETMLKKGEISAPDEFIALVRTVFRNAYVYN 103
>gi|384245392|gb|EIE18886.1| hypothetical protein COCSUDRAFT_45033 [Coccomyxa subellipsoidea
C-169]
Length = 554
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG-------QYSDPLAFAADVRLTFS 276
+F PVD +KL I DYF +K+PM L + K++ +Y D F D+R +
Sbjct: 1 MFVEPVDPVKLKIVDYFQYVKNPMALNDVAGKLSHNPAKGSFRKYKDVYEFRDDMRQIWE 60
Query: 277 NAMTYNPPQNDVHIMADTLRKYFEVRW--KAIEKKL--------PVTVDMTAVPSRADDM 326
N YNP V D + +Y+E +W IE+K + P M
Sbjct: 61 NCRLYNPIGQPVRTNGDWMSEYWEKKWAISGIEQKWEEEQLRQRHEETMLAGGPELPHHM 120
Query: 327 IETETRMGMPPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPESIIDFL 386
E + + M + +V A P R MT EEKR LS L +L + +++ +
Sbjct: 121 EEMDRELRMLQQQDGEV--------AAPGNRPMTFEEKRRLSQGLGSLSGDKLGLVMEII 172
Query: 387 KEHSAGETGEDELEIDIDALSDDTLFALRKLLDD 420
E + E E+E+DID L+ DTL+ L L+ D
Sbjct: 173 AECQRIDQ-EAEVEVDIDDLNQDTLWRLNALVTD 205
>gi|119194171|ref|XP_001247689.1| hypothetical protein CIMG_01460 [Coccidioides immitis RS]
gi|392863070|gb|EAS36227.2| transcription regulator BDF1 [Coccidioides immitis RS]
Length = 806
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLM---SHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE ++ L + F F PVD + LNIP Y +IK PMDL TI+ K+ +GQY
Sbjct: 456 LKFCEEVIDELHKPKHYNFAAPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQTGQYE 515
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ DVRL F N +N P + + L + F+ +W
Sbjct: 516 NSKEMENDVRLMFKNCYKFNIPGDPTYNAGKKLEEIFDYKW 556
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNP 283
F PVD +KLNIP+Y T+IK PMDL T++ KI SG Y AD +L N +T+N
Sbjct: 276 FFRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKIKSGAYKTVDQITADFKLMIDNCITFNG 335
Query: 284 PQNDVHIMADTLRKYFE 300
P++ V + LR +E
Sbjct: 336 PEHVVTVEGMRLRDNWE 352
>gi|353243946|emb|CCA75421.1| related to BDF1-Sporulation protein [Piriformospora indica DSM
11827]
Length = 534
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Query: 206 MKQCENLLTRLMSHQF-GWVFNT--PVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K C+ L L ++ WVF PVD+ + P+Y VIK+PMDLGTI+ K++ Y
Sbjct: 296 VKFCKTALDHLYRKEYETWVFPFLRPVDLSEF--PNYLEVIKNPMDLGTIRDKLSHAVYG 353
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRWKAIEKKLPVTVDMTAVPSR 322
F DV+L F+N TYNP V A L K F+ +W K+LP+ V++ SR
Sbjct: 354 TAEEFHKDVKLMFTNCYTYNPDWAPVWGYAKDLEKVFDSKW----KELPLEVEVQEKSSR 409
Query: 323 ADDMIETETRMGM-PPMKKKKVSPKETKIKAEPVRRVMTNEEKRILSTELEALLEELPES 381
D + +G P + + + P +TK + + N++ EL L ELP++
Sbjct: 410 RD----AKKHVGEGPVLTQLRTRPNKTKPRNSTASSLTENQK-----IELCDALWELPDA 460
Query: 382 IID 384
+D
Sbjct: 461 KLD 463
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 207 KQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSG--QYSDP 264
+ E L LM H F PVD ++ NIP YF VIK PMDLGTI+ K+ + Y
Sbjct: 134 RHIEGALKALMKHPAAVPFLVPVDPVQANIPTYFDVIKQPMDLGTIQSKLMASPCAYDTL 193
Query: 265 LAFAADVRLTFSNAMTYN 282
+F DV L F N +N
Sbjct: 194 QSFVNDVDLVFDNCYRFN 211
>gi|307103867|gb|EFN52124.1| hypothetical protein CHLNCDRAFT_27193 [Chlorella variabilis]
Length = 88
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 223 WVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYN 282
W FN PVD+ + PDY + PMD GTIK +I G Y P F +DVRL F NA YN
Sbjct: 2 WPFNAPVDLRQY--PDYAETVSRPMDFGTIKRRIDVGLYRHPDEFLSDVRLVFDNARLYN 59
Query: 283 PPQNDVHIMADTLR 296
P +DVH+MA+TL+
Sbjct: 60 KPGSDVHVMANTLQ 73
>gi|50553560|ref|XP_504191.1| YALI0E20537p [Yarrowia lipolytica]
gi|49650060|emb|CAG79786.1| YALI0E20537p [Yarrowia lipolytica CLIB122]
Length = 653
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 127 VASLSSNVVLSPSSDIRSCNDGQKRPLLESVGGPSVVLAPKGKKRA---------PNGRN 177
S ++ PS+D + +K+ S+GG S P+G A P+G
Sbjct: 216 FTSFERHMFNFPSADAPTEPQKKKK----SLGGGSSTRTPRGSMTAGSEETYALQPSGVP 271
Query: 178 GPQTKKGNSGR----LEPKKPAGAASSS-------NAMLMKQCENLLTRLMS---HQFGW 223
+ + GR + P KP ++ +A+ ++ C +L L S ++ +
Sbjct: 272 TIRRESAIDGRPKREIHPPKPKDLPYTNIKPRKKKHAIELRFCNQVLKELTSKKHEEYSF 331
Query: 224 VFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNP 283
F PVD + LN P YF +IK PMDL T++ K+ + Y F +DVRL F N +NP
Sbjct: 332 PFLLPVDPVALNCPSYFKIIKEPMDLSTVQEKMNNNAYETADEFESDVRLIFKNCYRFNP 391
Query: 284 PQNDVHIMADTLRKYFEVRW 303
V+ M L F+ +W
Sbjct: 392 DGTPVNKMGKRLEAIFDKKW 411
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD +KLNIP YF VIKHPMDLGT++ K+ +G+Y ADV+ N +T+N
Sbjct: 145 FIHPVDPVKLNIPTYFEVIKHPMDLGTMEKKLNNGEYGTKEDMIADVQRIVDNCLTFNGA 204
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA +L FE
Sbjct: 205 DSFISSMAKSLFTSFE 220
>gi|303311489|ref|XP_003065756.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105418|gb|EER23611.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320039630|gb|EFW21564.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 806
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLM---SHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
+K CE ++ L + F F PVD + LNIP Y +IK PMDL TI+ K+ +GQY
Sbjct: 456 LKFCEEVIDELHKPKHYNFAAPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQTGQYE 515
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ DVRL F N +N P + + L + F+ +W
Sbjct: 516 NSKEMENDVRLMFKNCYKFNIPGDPTYNAGKKLEEIFDYKW 556
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%)
Query: 191 PKKPAGAASSSNAMLMKQCENLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLG 250
P P A+++ + K L L F PVD +KLNIP+Y T+IK PMDL
Sbjct: 243 PDLPPPASTAITPLQNKFFIRTLAALKRTHDARFFRVPVDPVKLNIPNYPTIIKEPMDLH 302
Query: 251 TIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFE 300
T++ KI SG Y AD +L N +T+N P++ V + LR +E
Sbjct: 303 TMEDKIKSGAYKMVDQITADFKLMIDNCITFNGPEHVVTVEGMRLRDNWE 352
>gi|221504128|gb|EEE29805.1| histone acetyltransferase GCN5, putative [Toxoplasma gondii VEG]
Length = 1169
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 162 VVLAPKGKKRAPNGRNGP-QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ 220
V AP+G P GR G +KKG GR K G A L Q LL+ L H
Sbjct: 1025 VGAAPQGSGALPGGRTGALGSKKGPFGRAGFAK--GEKGLRAASLKAQIAALLSTLEKHS 1082
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
W F PV V + PDY+ V++ P+D+ T+K + +G Y AF D+ L F N
Sbjct: 1083 SSWPFRRPVSVSE--APDYYEVVRRPIDISTMKKRNRNGDYRTKEAFQEDLLLMFDNCRV 1140
Query: 281 YNPPQNDVHIMADTLRKYFEVRWKAIE 307
YN P + AD L+ + W +E
Sbjct: 1141 YNSPDTIYYKYADELQAFI---WPKVE 1164
>gi|6856566|gb|AAF29981.1|AF197953_1 histone acetyltransferase GCN5 [Toxoplasma gondii]
gi|221483205|gb|EEE21529.1| histone acetyltransferase GCN5, putative [Toxoplasma gondii GT1]
Length = 1169
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 162 VVLAPKGKKRAPNGRNGP-QTKKGNSGRLEPKKPAGAASSSNAMLMKQCENLLTRLMSHQ 220
V AP+G P GR G +KKG GR K G A L Q LL+ L H
Sbjct: 1025 VGAAPQGSGALPGGRTGALGSKKGPFGRAGFAK--GEKGLRAASLKAQIAALLSTLEKHS 1082
Query: 221 FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMT 280
W F PV V + PDY+ V++ P+D+ T+K + +G Y AF D+ L F N
Sbjct: 1083 SSWPFRRPVSVSE--APDYYEVVRRPIDISTMKKRNRNGDYRTKEAFQEDLLLMFDNCRV 1140
Query: 281 YNPPQNDVHIMADTLRKYFEVRWKAIE 307
YN P + AD L+ + W +E
Sbjct: 1141 YNSPDTIYYKYADELQAFI---WPKVE 1164
>gi|156847379|ref|XP_001646574.1| hypothetical protein Kpol_1055p73 [Vanderwaltozyma polyspora DSM
70294]
gi|156117252|gb|EDO18716.1| hypothetical protein Kpol_1055p73 [Vanderwaltozyma polyspora DSM
70294]
Length = 605
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMSHQ---FGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
MK C+ ++ L + + F + F PVD + LN+P YF +IK+P+DLGTI K+ + +Y
Sbjct: 223 MKFCQTVVKELANKKYASFNYPFLEPVDPVALNLPTYFEIIKNPIDLGTISKKLNNWEYK 282
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
F D++L F N +NP V++M L + + +W
Sbjct: 283 SMEEFETDIKLMFDNCFKFNPEGTIVNMMGHRLEEVYNSKW 323
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD LNIP YF I PMDL TI+ K+ + Y P ++D L N + +N P
Sbjct: 79 FILPVDPAALNIPYYFNKITRPMDLSTIERKLNANAYETPEQISSDFNLMVDNCIVFNGP 138
Query: 285 QNDVHIMADTLRKYFE 300
+ + MA ++ FE
Sbjct: 139 TSMIAQMARNIQAAFE 154
>gi|119500410|ref|XP_001266962.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
gi|119415127|gb|EAW25065.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
Length = 833
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 206 MKQCENLLTRLMS-HQFGWV--FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYS 262
++ C+ +L L + W F PVD + LNIP Y ++IK PMDL T++ K+ +GQY
Sbjct: 479 LRFCQEVLDELHKPKHYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 538
Query: 263 DPLAFAADVRLTFSNAMTYNPPQNDVHIMADTLRKYFEVRW 303
+ F D+R F N +N P + ++ ++ FE +W
Sbjct: 539 NAKEFEVDMRQIFKNCFKFNIPGDPTYMAGQRFQEIFENKW 579
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 213 LTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVR 272
L R+ +F + PVD +K+NIP Y +IKHPMDLGTI+ K+ + +Y A D
Sbjct: 296 LKRMNDARF---YREPVDPVKMNIPHYPQIIKHPMDLGTIERKLKNTEYKTAQAVVDDFN 352
Query: 273 LTFSNAMTYNPPQNDVHIMADTLRKYFEVRW----KA--IEKKLPVTVDM-TAVPSRADD 325
L NA+T+N P + V L+ FE + KA +E+K P V T+ R
Sbjct: 353 LMVQNAVTFNGPDHVVSQEGLKLKGTFEKQMMNLPKADEVEEKKPKKVSTKTSAAHR--- 409
Query: 326 MIETETRMGMPPMKKKKVSPKETKIKAEP-----VRRVMTNEEKR 365
E T +G + SP+ T P +RR TN + R
Sbjct: 410 --EPRTSIGTSTARPTATSPQATTFALGPEGLPLIRRDSTNTDGR 452
>gi|134115158|ref|XP_773877.1| hypothetical protein CNBH3290 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256505|gb|EAL19230.1| hypothetical protein CNBH3290 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 676
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 211 NLLTRLMSHQFGWVFNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAAD 270
+LL + SH+FG +F +PV K + PDY++VIK PMDL TIK KI G+ D
Sbjct: 572 SLLEAMASHRFGTIFESPV--RKSDAPDYYSVIKRPMDLKTIKGKIKDGRIERIDELERD 629
Query: 271 VRLTFSNAMTYNPPQNDVHIMADTLRK 297
V L FSNAM YN P + V+ MA + K
Sbjct: 630 VLLMFSNAMMYNAPDSQVYEMAKEMMK 656
>gi|328703550|ref|XP_003242232.1| PREDICTED: histone acetyltransferase p300-like [Acyrthosiphon pisum]
Length = 2051
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD LNIPDYF +IK PMDL TI+ K+ +GQ+SDP ++ DV L F NA YN
Sbjct: 1007 FKQPVDPQALNIPDYFIIIKKPMDLSTIREKLNTGQFSDPWSYVDDVWLMFENAWHYNKK 1066
Query: 285 QNDVHIMADTLRKYFE 300
V+ L + FE
Sbjct: 1067 STKVYKSCTKLSEVFE 1082
>gi|405978367|gb|EKC42766.1| CREB-binding protein [Crassostrea gigas]
Length = 2101
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 225 FNTPVDVMKLNIPDYFTVIKHPMDLGTIKCKITSGQYSDPLAFAADVRLTFSNAMTYNPP 284
F PVD + LNIPDYF ++K PMDL TI+ K+ +GQY+DP + DV L F NA YN
Sbjct: 869 FRQPVDPVMLNIPDYFDIVKKPMDLSTIRRKLDTGQYTDPWQYCDDVWLMFDNAWLYNRK 928
Query: 285 QNDVHIMADTLRKYFE 300
+ V+ + L + FE
Sbjct: 929 TSRVYKYSSKLAEVFE 944
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.127 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,992,955,562
Number of Sequences: 23463169
Number of extensions: 525046039
Number of successful extensions: 4232174
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13505
Number of HSP's successfully gapped in prelim test: 26375
Number of HSP's that attempted gapping in prelim test: 3524924
Number of HSP's gapped (non-prelim): 369909
length of query: 778
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 627
effective length of database: 8,816,256,848
effective search space: 5527793043696
effective search space used: 5527793043696
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 81 (35.8 bits)