Query 004034
Match_columns 778
No_of_seqs 380 out of 3051
Neff 8.5
Searched_HMMs 46136
Date Thu Mar 28 16:23:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004034.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004034hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02654 acetate-CoA ligase 100.0 4E-102 8E-107 920.5 74.8 656 123-778 10-666 (666)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 3E-100 7E-105 849.3 58.4 521 192-752 1-522 (528)
3 KOG1175 Acyl-CoA synthetase [L 100.0 1.7E-97 4E-102 827.1 56.9 614 141-776 9-624 (626)
4 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 7.7E-96 2E-100 863.8 72.2 618 142-774 4-624 (625)
5 PRK00174 acetyl-CoA synthetase 100.0 6E-94 1.3E-98 849.3 73.7 626 133-776 8-633 (637)
6 TIGR02316 propion_prpE propion 100.0 3.6E-93 7.8E-98 840.5 70.5 614 144-776 2-626 (628)
7 PTZ00237 acetyl-CoA synthetase 100.0 2.5E-92 5.5E-97 833.7 69.4 616 141-775 6-644 (647)
8 PRK10524 prpE propionyl-CoA sy 100.0 3.7E-91 8E-96 824.5 69.2 614 143-775 2-626 (629)
9 TIGR01217 ac_ac_CoA_syn acetoa 100.0 3.8E-90 8.2E-95 816.5 68.7 610 142-776 34-648 (652)
10 PRK03584 acetoacetyl-CoA synth 100.0 2.6E-89 5.6E-94 812.0 70.6 612 142-776 33-650 (655)
11 PLN03052 acetate--CoA ligase; 100.0 9.7E-85 2.1E-89 774.3 66.5 583 142-753 119-722 (728)
12 KOG1176 Acyl-CoA synthetase [L 100.0 4.9E-78 1.1E-82 675.2 52.9 500 214-753 29-533 (537)
13 PRK04319 acetyl-CoA synthetase 100.0 1.9E-75 4E-80 682.9 59.9 536 192-765 35-570 (570)
14 TIGR03443 alpha_am_amid L-amin 100.0 2.3E-76 5E-81 756.2 55.0 608 102-749 152-825 (1389)
15 PRK12467 peptide synthase; Pro 100.0 3.7E-77 8.1E-82 812.5 49.3 575 102-752 3011-3594(3956)
16 KOG1177 Long chain fatty acid 100.0 3.2E-76 7E-81 614.4 43.9 523 201-754 51-589 (596)
17 PRK12467 peptide synthase; Pro 100.0 1.2E-76 2.6E-81 807.7 49.5 585 100-752 1487-2085(3956)
18 PRK10252 entF enterobactin syn 100.0 6.8E-75 1.5E-79 739.7 52.5 572 106-749 378-964 (1296)
19 PRK05691 peptide synthase; Val 100.0 2.1E-75 4.5E-80 802.4 50.9 582 103-750 3637-4226(4334)
20 PRK12316 peptide synthase; Pro 100.0 9.6E-75 2.1E-79 801.1 52.1 577 100-751 424-1005(5163)
21 PRK12316 peptide synthase; Pro 100.0 3.9E-74 8.4E-79 795.0 51.4 568 101-751 2971-3543(5163)
22 COG0318 CaiC Acyl-CoA syntheta 100.0 1.3E-72 2.8E-77 651.3 55.6 511 201-752 12-527 (534)
23 PRK07788 acyl-CoA synthetase; 100.0 1.4E-72 3.1E-77 655.8 52.4 499 201-749 50-548 (549)
24 PRK05691 peptide synthase; Val 100.0 6.6E-73 1.4E-77 777.7 53.9 576 101-750 1046-1626(4334)
25 PRK07529 AMP-binding domain pr 100.0 2.7E-71 5.8E-76 654.2 59.9 524 201-752 26-570 (632)
26 PRK06060 acyl-CoA synthetase; 100.0 2.1E-71 4.5E-76 663.9 53.8 483 202-750 6-490 (705)
27 PRK13295 cyclohexanecarboxylat 100.0 2.8E-70 6.1E-75 636.2 59.5 511 201-752 25-544 (547)
28 PLN02860 o-succinylbenzoate-Co 100.0 8.9E-71 1.9E-75 642.3 52.9 515 201-756 8-558 (563)
29 PLN02736 long-chain acyl-CoA s 100.0 1.1E-70 2.5E-75 651.4 50.7 525 201-758 45-647 (651)
30 PRK06334 long chain fatty acid 100.0 2.3E-70 5E-75 634.9 52.1 506 201-752 20-535 (539)
31 PLN02574 4-coumarate--CoA liga 100.0 1.1E-69 2.4E-74 632.7 53.5 509 199-752 40-554 (560)
32 PRK13382 acyl-CoA synthetase; 100.0 2E-69 4.3E-74 627.4 55.0 492 202-748 45-536 (537)
33 PLN02246 4-coumarate--CoA liga 100.0 9.4E-69 2E-73 622.1 56.2 505 201-751 24-535 (537)
34 PRK05852 acyl-CoA synthetase; 100.0 2E-68 4.4E-73 618.9 55.7 518 192-751 8-531 (534)
35 PLN02614 long-chain acyl-CoA s 100.0 2.9E-69 6.3E-74 638.5 48.9 529 199-759 44-656 (666)
36 PRK05677 long-chain-fatty-acid 100.0 2.5E-68 5.4E-73 621.7 55.8 514 201-753 25-558 (562)
37 PRK07656 long-chain-fatty-acid 100.0 4.7E-68 1E-72 612.5 56.4 506 201-748 6-512 (513)
38 PRK08314 long-chain-fatty-acid 100.0 4.1E-68 8.9E-73 618.1 55.7 515 201-752 11-542 (546)
39 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.1E-67 2.3E-72 613.3 55.7 506 201-747 23-537 (538)
40 PRK06839 acyl-CoA synthetase; 100.0 1.8E-67 3.8E-72 605.2 56.7 490 202-751 4-494 (496)
41 PRK12583 acyl-CoA synthetase; 100.0 2.6E-67 5.6E-72 613.0 58.0 519 201-753 19-553 (558)
42 PRK05857 acyl-CoA synthetase; 100.0 4.9E-68 1.1E-72 616.2 51.6 507 201-756 15-535 (540)
43 PRK09274 peptide synthase; Pro 100.0 1E-67 2.2E-72 615.6 53.8 512 202-753 8-549 (552)
44 PRK05605 long-chain-fatty-acid 100.0 6.1E-67 1.3E-71 611.7 58.4 514 201-753 33-570 (573)
45 PLN02861 long-chain-fatty-acid 100.0 4.8E-68 1E-72 628.4 49.2 528 200-759 43-653 (660)
46 PRK06145 acyl-CoA synthetase; 100.0 4.5E-67 9.8E-72 602.1 55.5 493 202-751 4-496 (497)
47 COG1021 EntE Peptide arylation 100.0 1.5E-68 3.2E-73 544.9 36.6 507 201-752 29-538 (542)
48 PRK07769 long-chain-fatty-acid 100.0 2.8E-67 6.1E-72 621.0 52.7 511 201-753 22-615 (631)
49 PRK07638 acyl-CoA synthetase; 100.0 7E-67 1.5E-71 599.1 54.4 480 202-753 3-482 (487)
50 PRK08316 acyl-CoA synthetase; 100.0 1.3E-66 2.9E-71 601.8 56.9 511 200-754 11-521 (523)
51 PRK06087 short chain acyl-CoA 100.0 1.1E-66 2.5E-71 606.1 56.4 514 201-755 24-539 (547)
52 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.1E-66 2.4E-71 603.3 56.0 501 201-747 24-527 (527)
53 PRK06155 crotonobetaine/carnit 100.0 1.7E-66 3.6E-71 603.4 57.2 501 201-751 22-523 (542)
54 PRK07470 acyl-CoA synthetase; 100.0 1.3E-66 2.9E-71 602.8 55.8 503 202-753 9-519 (528)
55 PRK05620 long-chain-fatty-acid 100.0 1.3E-66 2.8E-71 609.1 54.9 523 201-753 11-558 (576)
56 PRK13390 acyl-CoA synthetase; 100.0 1.2E-66 2.5E-71 599.4 53.1 492 208-747 5-501 (501)
57 PRK06187 long-chain-fatty-acid 100.0 3.4E-66 7.4E-71 597.8 57.1 507 201-752 7-519 (521)
58 PRK08008 caiC putative crotono 100.0 2.7E-66 5.8E-71 598.8 56.1 508 201-747 8-517 (517)
59 PRK07514 malonyl-CoA synthase; 100.0 3.2E-66 7E-71 596.1 56.2 497 201-752 4-501 (504)
60 PRK03640 O-succinylbenzoic aci 100.0 1.7E-66 3.8E-71 595.1 53.5 479 201-752 3-482 (483)
61 PRK08315 AMP-binding domain pr 100.0 6E-66 1.3E-70 601.6 58.7 519 201-753 17-552 (559)
62 PRK08043 bifunctional acyl-[ac 100.0 4.9E-67 1.1E-71 626.8 50.3 500 201-752 205-713 (718)
63 PRK07008 long-chain-fatty-acid 100.0 4.6E-66 1E-70 599.6 55.8 511 201-752 11-533 (539)
64 TIGR02262 benz_CoA_lig benzoat 100.0 4.5E-66 9.7E-71 595.6 55.3 507 198-749 2-508 (508)
65 PRK05851 long-chain-fatty-acid 100.0 4.9E-67 1.1E-71 605.7 47.2 494 199-752 1-522 (525)
66 PLN02330 4-coumarate--CoA liga 100.0 2.3E-66 5E-71 603.2 52.7 501 201-753 29-542 (546)
67 TIGR03098 ligase_PEP_1 acyl-Co 100.0 9.3E-66 2E-70 593.7 55.9 504 202-748 2-514 (515)
68 PRK12476 putative fatty-acid-- 100.0 1.7E-66 3.7E-71 611.9 50.4 508 201-752 35-606 (612)
69 PRK07786 long-chain-fatty-acid 100.0 1.2E-65 2.6E-70 596.7 55.8 510 197-753 15-525 (542)
70 PRK10946 entE enterobactin syn 100.0 1.3E-65 2.9E-70 595.3 55.2 505 201-753 26-533 (536)
71 PRK09088 acyl-CoA synthetase; 100.0 9.7E-66 2.1E-70 589.8 52.8 480 208-752 3-485 (488)
72 PLN03102 acyl-activating enzym 100.0 1.7E-65 3.8E-70 599.2 55.7 511 202-753 16-555 (579)
73 PRK13388 acyl-CoA synthetase; 100.0 2.5E-65 5.5E-70 593.2 56.4 488 201-753 4-507 (540)
74 PRK12492 long-chain-fatty-acid 100.0 1.7E-65 3.8E-70 597.8 55.2 510 201-749 25-561 (562)
75 PTZ00342 acyl-CoA synthetase; 100.0 7.2E-66 1.6E-70 609.0 52.5 523 201-756 62-738 (746)
76 PRK06710 long-chain-fatty-acid 100.0 2.6E-65 5.7E-70 596.7 54.3 515 201-754 25-557 (563)
77 PRK06178 acyl-CoA synthetase; 100.0 1E-64 2.2E-69 592.3 57.3 522 192-752 26-565 (567)
78 TIGR01734 D-ala-DACP-lig D-ala 100.0 4.2E-65 9.2E-70 586.5 53.4 494 202-751 2-501 (502)
79 PRK06188 acyl-CoA synthetase; 100.0 1E-64 2.3E-69 586.5 56.5 500 201-751 13-516 (524)
80 PRK06018 putative acyl-CoA syn 100.0 1.1E-64 2.4E-69 588.6 55.9 512 201-752 11-534 (542)
81 PRK08279 long-chain-acyl-CoA s 100.0 4.8E-65 1E-69 598.7 53.4 517 201-767 38-578 (600)
82 PRK07059 Long-chain-fatty-acid 100.0 1.9E-64 4.2E-69 588.6 57.1 512 200-749 23-555 (557)
83 TIGR03205 pimA dicarboxylate-- 100.0 1.8E-64 3.8E-69 586.8 56.0 509 201-747 22-541 (541)
84 PLN02387 long-chain-fatty-acid 100.0 2.1E-65 4.5E-70 608.5 48.9 533 200-758 58-695 (696)
85 PRK06164 acyl-CoA synthetase; 100.0 3.3E-64 7.1E-69 584.5 55.4 512 201-753 11-533 (540)
86 PRK07867 acyl-CoA synthetase; 100.0 3.9E-64 8.4E-69 581.7 55.7 485 201-753 6-508 (529)
87 PRK13383 acyl-CoA synthetase; 100.0 2.1E-64 4.6E-69 582.7 53.3 477 202-747 37-515 (516)
88 PRK08751 putative long-chain f 100.0 2.5E-64 5.5E-69 588.0 53.9 510 201-749 26-557 (560)
89 PLN03051 acyl-activating enzym 100.0 1.3E-64 2.7E-69 581.7 50.5 469 264-753 1-492 (499)
90 PRK07787 acyl-CoA synthetase; 100.0 2E-64 4.4E-69 576.2 51.7 455 213-748 12-469 (471)
91 PLN02430 long-chain-fatty-acid 100.0 5.8E-65 1.3E-69 601.2 48.7 531 198-759 40-653 (660)
92 PRK13391 acyl-CoA synthetase; 100.0 5.2E-64 1.1E-68 578.8 55.0 501 208-752 5-509 (511)
93 PRK04813 D-alanine--poly(phosp 100.0 6.1E-64 1.3E-68 576.8 55.3 494 202-751 4-502 (503)
94 PRK08633 2-acyl-glycerophospho 100.0 9.2E-65 2E-69 639.8 52.7 507 201-752 616-1143(1146)
95 PTZ00216 acyl-CoA synthetase; 100.0 8.8E-65 1.9E-69 604.5 48.0 520 201-759 70-698 (700)
96 PRK08180 feruloyl-CoA synthase 100.0 1.7E-64 3.6E-69 595.0 48.0 516 201-760 40-604 (614)
97 PRK07798 acyl-CoA synthetase; 100.0 6.2E-63 1.3E-67 572.5 56.7 508 202-752 5-532 (533)
98 PRK07868 acyl-CoA synthetase; 100.0 2.9E-63 6.3E-68 608.8 56.9 528 146-751 407-957 (994)
99 PRK08276 long-chain-fatty-acid 100.0 4.6E-63 1E-67 569.6 53.5 483 230-753 9-497 (502)
100 PLN02479 acetate-CoA ligase 100.0 5.8E-63 1.3E-67 577.0 54.9 518 202-752 22-558 (567)
101 PRK07445 O-succinylbenzoic aci 100.0 1.9E-63 4E-68 563.9 47.9 430 232-754 19-449 (452)
102 PRK06814 acylglycerophosphoeth 100.0 6.3E-63 1.4E-67 621.6 53.8 499 202-753 633-1133(1140)
103 PRK08974 long-chain-fatty-acid 100.0 6.5E-62 1.4E-66 567.7 57.9 514 201-753 24-556 (560)
104 PRK12582 acyl-CoA synthetase; 100.0 2.2E-63 4.7E-68 586.6 44.5 524 201-769 50-622 (624)
105 PRK09192 acyl-CoA synthetase; 100.0 2.1E-62 4.5E-67 573.8 49.4 504 201-753 22-567 (579)
106 PRK12406 long-chain-fatty-acid 100.0 2.1E-61 4.5E-66 556.9 55.5 487 230-752 9-503 (509)
107 PRK05850 acyl-CoA synthetase; 100.0 6.9E-62 1.5E-66 569.6 50.4 511 202-753 3-569 (578)
108 PRK09029 O-succinylbenzoic aci 100.0 1E-61 2.2E-66 551.9 49.3 446 206-753 9-454 (458)
109 PRK08162 acyl-CoA synthetase; 100.0 1.1E-60 2.4E-65 555.5 57.4 506 202-752 20-539 (545)
110 COG1022 FAA1 Long-chain acyl-C 100.0 8.4E-61 1.8E-65 540.0 44.0 518 192-758 8-607 (613)
111 PRK08308 acyl-CoA synthetase; 100.0 2.5E-59 5.4E-64 525.3 49.8 403 230-747 6-408 (414)
112 TIGR01923 menE O-succinylbenzo 100.0 2E-59 4.3E-64 529.5 48.2 435 234-746 1-436 (436)
113 PRK07768 long-chain-fatty-acid 100.0 1.4E-59 3E-64 546.4 48.1 498 202-751 4-544 (545)
114 KOG1256 Long-chain acyl-CoA sy 100.0 4.7E-59 1E-63 517.1 44.7 536 192-759 69-687 (691)
115 PF00501 AMP-binding: AMP-bind 100.0 4.6E-56 1E-60 499.0 37.0 411 206-654 1-417 (417)
116 KOG1180 Acyl-CoA synthetase [L 100.0 4.1E-54 9E-59 455.9 34.6 524 204-758 64-675 (678)
117 COG1020 EntF Non-ribosomal pep 100.0 1.5E-53 3.2E-58 505.4 39.8 494 102-671 148-642 (642)
118 TIGR01733 AA-adenyl-dom amino 100.0 2.5E-51 5.5E-56 459.0 43.5 397 234-678 1-408 (408)
119 KOG1179 Very long-chain acyl-C 100.0 4.6E-51 9.9E-56 435.0 41.1 504 201-749 78-610 (649)
120 PRK07824 O-succinylbenzoic aci 100.0 1E-47 2.2E-52 422.8 37.9 324 384-752 32-357 (358)
121 PTZ00297 pantothenate kinase; 100.0 4E-44 8.6E-49 439.4 44.3 498 192-759 419-1002(1452)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 7.2E-40 1.6E-44 360.5 32.1 290 387-742 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 6.4E-37 1.4E-41 344.3 31.7 329 384-744 72-418 (422)
124 KOG1178 Non-ribosomal peptide 100.0 8.3E-36 1.8E-40 348.2 28.4 504 201-750 37-577 (1032)
125 TIGR03335 F390_ftsA coenzyme F 100.0 1.3E-28 2.9E-33 277.5 31.4 329 384-743 83-440 (445)
126 KOG3628 Predicted AMP-binding 100.0 1.7E-27 3.8E-32 269.0 39.4 520 200-752 770-1351(1363)
127 TIGR03089 conserved hypothetic 99.9 2.1E-25 4.5E-30 227.9 23.6 223 207-483 3-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 2.3E-23 4.9E-28 224.0 30.6 327 384-742 87-429 (438)
129 PRK09188 serine/threonine prot 99.9 1.8E-23 4E-28 225.6 17.4 140 623-774 207-351 (365)
130 KOG3628 Predicted AMP-binding 99.8 2.5E-16 5.5E-21 179.5 27.8 492 213-752 106-704 (1363)
131 TIGR02304 aden_form_hyp probab 99.7 4.2E-15 9.2E-20 164.5 26.8 257 389-696 101-377 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.4 4E-13 8.6E-18 111.4 7.8 70 662-740 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.8 3.2E-07 7E-12 99.8 20.0 242 384-657 86-357 (365)
134 PF03321 GH3: GH3 auxin-respon 98.5 2.1E-06 4.6E-11 98.7 14.9 161 508-699 266-452 (528)
135 PLN02249 indole-3-acetic acid- 97.7 0.0079 1.7E-07 69.8 23.7 131 508-669 301-456 (597)
136 PLN02247 indole-3-acetic acid- 97.6 0.0046 9.9E-08 71.2 20.4 135 507-670 291-464 (606)
137 PF14535 AMP-binding_C_2: AMP- 97.5 0.00062 1.3E-08 59.4 9.7 85 655-743 1-91 (96)
138 PLN02620 indole-3-acetic acid- 97.4 0.046 1E-06 63.0 24.9 135 507-670 302-470 (612)
139 PF13745 HxxPF_rpt: HxxPF-repe 94.2 0.0033 7.1E-08 54.1 -3.9 44 95-140 47-90 (91)
140 COG1541 PaaK Coenzyme F390 syn 93.1 0.4 8.7E-06 53.1 9.1 84 231-315 108-193 (438)
141 TIGR03335 F390_ftsA coenzyme F 81.3 9.7 0.00021 43.2 10.6 80 231-313 104-185 (445)
142 TIGR02155 PA_CoA_ligase phenyl 78.7 11 0.00023 42.3 9.9 82 232-314 94-177 (422)
143 TIGR03089 conserved hypothetic 77.9 10 0.00023 38.6 8.6 54 250-305 171-226 (227)
144 PF09580 Spore_YhcN_YlaJ: Spor 73.5 9.2 0.0002 37.3 6.6 56 660-720 77-132 (177)
145 PLN02736 long-chain acyl-CoA s 69.5 70 0.0015 38.1 14.2 121 385-518 57-181 (651)
146 TIGR02898 spore_YhcN_YlaJ spor 56.6 45 0.00097 31.8 7.3 57 660-721 56-114 (158)
147 TIGR02080 O_succ_thio_ly O-suc 55.2 3E+02 0.0065 30.4 14.9 72 254-326 87-158 (382)
148 PRK08315 AMP-binding domain pr 53.0 60 0.0013 37.6 9.5 80 231-313 217-298 (559)
149 PTZ00342 acyl-CoA synthetase; 52.5 2E+02 0.0044 35.0 14.0 120 385-519 74-209 (746)
150 PF00501 AMP-binding: AMP-bind 50.3 1.3E+02 0.0028 33.2 11.2 89 385-487 8-99 (417)
151 PRK07656 long-chain-fatty-acid 50.0 63 0.0014 36.8 8.9 96 214-313 164-264 (513)
152 COG0365 Acs Acyl-coenzyme A sy 49.2 3.2E+02 0.007 31.7 14.1 99 389-496 26-127 (528)
153 PRK12583 acyl-CoA synthetase; 48.9 83 0.0018 36.4 9.8 80 231-313 219-300 (558)
154 PF01514 YscJ_FliF: Secretory 47.9 60 0.0013 32.5 7.1 75 656-732 113-194 (206)
155 PRK05934 type III secretion sy 46.9 1E+02 0.0023 32.5 8.6 71 661-732 74-148 (341)
156 PLN02387 long-chain-fatty-acid 46.7 1.7E+02 0.0036 35.3 12.1 86 423-519 125-210 (696)
157 PRK06187 long-chain-fatty-acid 46.2 99 0.0022 35.2 9.8 96 215-314 166-265 (521)
158 KOG1177 Long chain fatty acid 44.2 1.6E+02 0.0034 33.4 9.9 112 403-519 74-199 (596)
159 PF01037 AsnC_trans_reg: AsnC 43.1 97 0.0021 24.7 6.6 54 651-718 3-57 (74)
160 PRK10524 prpE propionyl-CoA sy 42.3 1.8E+02 0.0038 34.5 11.3 96 385-489 66-164 (629)
161 PLN03051 acyl-activating enzym 41.8 1.7E+02 0.0036 33.5 10.7 82 230-314 136-218 (499)
162 PRK07788 acyl-CoA synthetase; 40.5 2.5E+02 0.0055 32.4 12.1 87 406-497 74-162 (549)
163 PLN02430 long-chain-fatty-acid 39.9 4.7E+02 0.01 31.2 14.4 122 385-518 55-180 (660)
164 PLN02614 long-chain acyl-CoA s 39.4 5.3E+02 0.012 30.8 14.8 106 385-497 58-167 (666)
165 PLN02861 long-chain-fatty-acid 39.4 5.1E+02 0.011 30.9 14.6 87 406-497 77-165 (660)
166 TIGR02188 Ac_CoA_lig_AcsA acet 39.4 1.9E+02 0.0041 34.1 11.0 98 385-490 70-169 (625)
167 TIGR03098 ligase_PEP_1 acyl-Co 39.1 1.5E+02 0.0033 33.7 9.9 81 230-314 178-259 (515)
168 PLN03052 acetate--CoA ligase; 38.8 2.4E+02 0.0053 34.2 11.8 100 385-490 188-289 (728)
169 PRK10877 protein disulfide iso 38.5 2.1E+02 0.0046 29.2 9.6 75 630-713 55-132 (232)
170 PRK07529 AMP-binding domain pr 38.1 4.2E+02 0.0091 31.4 13.6 98 385-489 38-137 (632)
171 COG1167 ARO8 Transcriptional r 37.6 1.3E+02 0.0028 34.2 8.7 80 426-532 176-255 (459)
172 PRK09274 peptide synthase; Pro 37.2 2.9E+02 0.0062 31.9 11.9 99 386-489 20-121 (552)
173 TIGR02544 III_secr_YscJ type I 36.5 1.7E+02 0.0037 29.0 8.2 70 659-730 108-184 (193)
174 PRK06334 long chain fatty acid 35.6 2.7E+02 0.006 32.1 11.3 83 407-495 46-128 (539)
175 PRK00174 acetyl-CoA synthetase 35.5 3.1E+02 0.0066 32.5 11.9 98 385-490 80-179 (637)
176 PF01041 DegT_DnrJ_EryC1: DegT 35.2 77 0.0017 34.7 6.2 65 244-312 52-121 (363)
177 TIGR01217 ac_ac_CoA_syn acetoa 35.1 2.7E+02 0.0058 33.2 11.3 93 387-489 99-194 (652)
178 TIGR01923 menE O-succinylbenzo 35.1 1.3E+02 0.0029 33.3 8.3 78 230-313 128-206 (436)
179 PLN02654 acetate-CoA ligase 34.7 2.6E+02 0.0057 33.4 11.1 97 386-490 103-201 (666)
180 PRK05852 acyl-CoA synthetase; 34.2 3.9E+02 0.0084 30.7 12.3 81 231-314 194-277 (534)
181 COG0399 WecE Predicted pyridox 34.2 1.3E+02 0.0029 33.1 7.6 66 243-312 60-130 (374)
182 TIGR01733 AA-adenyl-dom amino 34.0 1.8E+02 0.0038 31.9 9.0 74 417-495 13-86 (408)
183 PRK03584 acetoacetyl-CoA synth 33.5 3E+02 0.0066 32.7 11.5 95 386-489 98-194 (655)
184 TIGR02379 ECA_wecE TDP-4-keto- 33.4 1.2E+02 0.0026 33.5 7.4 61 248-312 62-127 (376)
185 PRK04319 acetyl-CoA synthetase 33.0 1.6E+02 0.0035 34.2 8.9 96 215-313 204-304 (570)
186 PRK05939 hypothetical protein; 32.9 2.3E+02 0.005 31.5 9.6 76 247-325 77-152 (397)
187 PRK13295 cyclohexanecarboxylat 32.6 3E+02 0.0064 31.8 10.9 98 385-490 37-136 (547)
188 PRK08008 caiC putative crotono 32.4 3.5E+02 0.0076 30.8 11.4 68 423-495 56-123 (517)
189 PRK06702 O-acetylhomoserine am 32.1 2.9E+02 0.0063 31.1 10.2 76 248-326 92-169 (432)
190 PRK11706 TDP-4-oxo-6-deoxy-D-g 31.8 1.4E+02 0.0031 32.7 7.7 61 248-312 62-127 (375)
191 PRK08574 cystathionine gamma-s 31.2 2.9E+02 0.0062 30.6 9.9 71 254-326 89-159 (385)
192 PRK14807 histidinol-phosphate 31.1 7E+02 0.015 26.9 13.3 69 254-325 97-169 (351)
193 PRK05620 long-chain-fatty-acid 31.1 2.9E+02 0.0062 32.2 10.6 88 405-497 37-127 (576)
194 PRK07638 acyl-CoA synthetase; 30.5 3.7E+02 0.008 30.3 11.2 81 230-314 160-241 (487)
195 PRK13383 acyl-CoA synthetase; 30.2 2.7E+02 0.0058 31.9 9.9 69 423-496 79-147 (516)
196 PRK05850 acyl-CoA synthetase; 29.8 5E+02 0.011 30.1 12.3 105 385-495 14-123 (578)
197 TIGR02316 propion_prpE propion 29.8 3.4E+02 0.0074 32.1 11.0 97 385-489 65-163 (628)
198 PRK06839 acyl-CoA synthetase; 29.7 3.2E+02 0.0069 30.8 10.4 87 405-496 26-115 (496)
199 PLN02246 4-coumarate--CoA liga 29.6 3.9E+02 0.0085 30.7 11.3 99 385-495 36-136 (537)
200 PLN02574 4-coumarate--CoA liga 29.6 2.8E+02 0.0061 32.2 10.1 100 385-496 52-154 (560)
201 PRK13237 tyrosine phenol-lyase 29.3 2.4E+02 0.0051 32.1 8.7 50 250-304 110-174 (460)
202 KOG1176 Acyl-CoA synthetase [L 29.0 4.5E+02 0.0097 30.6 11.2 90 404-498 43-136 (537)
203 PRK08045 cystathionine gamma-s 28.8 4E+02 0.0086 29.5 10.5 71 254-326 88-159 (386)
204 TIGR02618 tyr_phenol_ly tyrosi 28.5 3.5E+02 0.0077 30.6 9.8 51 249-304 102-167 (450)
205 PRK08043 bifunctional acyl-[ac 28.4 4.2E+02 0.0091 32.0 11.6 96 214-312 363-463 (718)
206 PRK06155 crotonobetaine/carnit 28.4 3.5E+02 0.0076 31.2 10.6 70 423-497 65-134 (542)
207 PTZ00237 acetyl-CoA synthetase 28.3 4E+02 0.0087 31.7 11.2 80 405-489 91-172 (647)
208 cd06534 ALDH-SF NAD(P)+-depend 28.0 4.4E+02 0.0095 28.7 10.7 37 445-481 110-146 (367)
209 PRK08751 putative long-chain f 28.0 2.8E+02 0.0061 32.1 9.7 96 385-494 38-136 (560)
210 COG0436 Aspartate/tyrosine/aro 27.9 8.1E+02 0.017 27.2 12.8 73 245-322 102-181 (393)
211 PRK09265 aminotransferase AlaT 27.9 8.2E+02 0.018 26.9 13.1 65 254-322 116-186 (404)
212 PF09153 DUF1938: Domain of un 27.9 81 0.0018 26.3 3.5 47 217-267 15-62 (86)
213 PRK05857 acyl-CoA synthetase; 27.9 3.7E+02 0.0079 31.0 10.6 95 385-491 27-123 (540)
214 PRK09509 fieF ferrous iron eff 27.8 2.1E+02 0.0045 30.4 7.8 62 660-721 215-278 (299)
215 PRK13391 acyl-CoA synthetase; 27.7 4.9E+02 0.011 29.6 11.6 98 385-495 10-110 (511)
216 PRK06164 acyl-CoA synthetase; 27.5 4.4E+02 0.0094 30.3 11.2 96 214-313 179-278 (540)
217 PRK08314 long-chain-fatty-acid 27.1 3.1E+02 0.0068 31.5 9.9 86 406-496 35-123 (546)
218 COG0520 csdA Selenocysteine ly 27.1 9.1E+02 0.02 26.9 13.3 88 241-330 96-188 (405)
219 cd01445 TST_Repeats Thiosulfat 26.9 1.5E+02 0.0034 27.4 5.8 42 242-283 80-124 (138)
220 PRK07798 acyl-CoA synthetase; 26.6 5.5E+02 0.012 29.1 11.8 70 423-497 47-116 (533)
221 PRK15348 type III secretion sy 26.5 3.2E+02 0.0069 28.3 8.4 70 660-731 109-184 (249)
222 cd07050 BMC_EutL_repeat2 ethan 26.3 1.1E+02 0.0025 25.3 4.0 41 247-287 4-45 (87)
223 PRK07503 methionine gamma-lyas 26.2 4.2E+02 0.0091 29.5 10.2 71 254-326 101-172 (403)
224 TIGR02262 benz_CoA_lig benzoat 26.0 3.8E+02 0.0083 30.4 10.2 98 214-313 159-261 (508)
225 TIGR03443 alpha_am_amid L-amin 25.6 3.5E+02 0.0077 35.6 10.9 99 385-488 249-349 (1389)
226 PLN03102 acyl-activating enzym 25.4 3.3E+02 0.0072 31.8 9.7 66 423-493 58-123 (579)
227 PF02878 PGM_PMM_I: Phosphoglu 24.9 4.6E+02 0.0099 24.0 8.7 80 232-313 17-101 (137)
228 KOG2104 Nuclear transport fact 24.7 60 0.0013 29.0 2.3 99 526-636 14-122 (126)
229 PRK07008 long-chain-fatty-acid 24.5 3.1E+02 0.0068 31.6 9.2 81 231-313 194-276 (539)
230 TIGR03595 Obg_CgtA_exten Obg f 24.4 70 0.0015 25.8 2.6 21 243-263 43-63 (69)
231 PRK07867 acyl-CoA synthetase; 24.4 4.7E+02 0.01 30.1 10.6 84 406-494 28-114 (529)
232 PRK08316 acyl-CoA synthetase; 24.4 3.7E+02 0.0081 30.5 9.8 86 405-496 35-123 (523)
233 PRK06188 acyl-CoA synthetase; 24.3 5.9E+02 0.013 29.0 11.4 79 231-313 186-264 (524)
234 PRK03359 putative electron tra 24.1 6.5E+02 0.014 26.2 10.3 85 231-316 30-124 (256)
235 PRK06234 methionine gamma-lyas 24.0 5.7E+02 0.012 28.4 10.7 72 254-327 100-172 (400)
236 cd07078 ALDH NAD(P)+ dependent 24.0 5.1E+02 0.011 28.9 10.5 37 445-481 114-150 (432)
237 PRK07514 malonyl-CoA synthase; 24.0 3.8E+02 0.0082 30.3 9.7 68 423-495 47-114 (504)
238 PRK05605 long-chain-fatty-acid 23.7 4.1E+02 0.009 30.8 10.1 68 423-495 76-143 (573)
239 PF08734 GYD: GYD domain; Int 23.6 3.8E+02 0.0082 22.9 7.1 62 239-300 19-90 (91)
240 PRK10595 SOS cell division inh 23.3 2.6E+02 0.0056 26.9 6.5 65 246-310 70-140 (164)
241 PRK11658 UDP-4-amino-4-deoxy-L 23.2 2.7E+02 0.0058 30.7 7.9 64 244-311 60-128 (379)
242 PRK08308 acyl-CoA synthetase; 23.0 4.7E+02 0.01 28.8 10.0 96 214-313 99-199 (414)
243 cd06451 AGAT_like Alanine-glyo 22.8 6.9E+02 0.015 26.8 11.0 90 242-332 60-152 (356)
244 PRK15407 lipopolysaccharide bi 22.5 2.5E+02 0.0054 31.7 7.6 58 251-312 105-167 (438)
245 PRK12492 long-chain-fatty-acid 22.4 4.2E+02 0.0091 30.7 9.8 82 405-491 48-132 (562)
246 cd00615 Orn_deC_like Ornithine 22.0 5.7E+02 0.012 26.8 9.9 69 254-326 96-175 (294)
247 PLN02479 acetate-CoA ligase 21.7 5.3E+02 0.012 29.9 10.5 66 423-493 64-129 (567)
248 PRK07050 cystathionine beta-ly 21.7 1.1E+03 0.024 26.0 13.9 59 254-314 101-160 (394)
249 PRK08162 acyl-CoA synthetase; 21.7 4.1E+02 0.0089 30.5 9.5 84 406-495 43-129 (545)
250 KOG0883 Cyclophilin type, U bo 21.6 73 0.0016 34.4 2.7 59 16-78 313-375 (518)
251 PRK06855 aminotransferase; Val 21.3 9.3E+02 0.02 26.9 11.9 67 254-322 116-189 (433)
252 TIGR03588 PseC UDP-4-keto-6-de 21.1 3.7E+02 0.0081 29.4 8.6 67 243-312 55-129 (380)
253 PF09269 DUF1967: Domain of un 21.0 70 0.0015 25.9 1.9 31 232-262 32-62 (69)
254 KOG1179 Very long-chain acyl-C 21.0 3.4E+02 0.0074 31.5 7.8 74 232-309 261-336 (649)
255 PRK08776 cystathionine gamma-s 21.0 5.9E+02 0.013 28.3 10.1 72 254-327 96-168 (405)
256 COG0318 CaiC Acyl-CoA syntheta 20.9 7.7E+02 0.017 28.4 11.5 99 214-313 169-273 (534)
257 PRK13388 acyl-CoA synthetase; 20.8 5.6E+02 0.012 29.5 10.3 85 406-495 26-113 (540)
258 cd07109 ALDH_AAS00426 Uncharac 20.6 7.6E+02 0.017 27.9 11.1 89 431-532 120-215 (454)
259 PRK12342 hypothetical protein; 20.6 4.9E+02 0.011 27.0 8.5 83 231-316 29-121 (254)
260 PRK09088 acyl-CoA synthetase; 20.6 7.6E+02 0.016 27.7 11.3 79 406-489 22-102 (488)
261 PLN03026 histidinol-phosphate 20.5 1.1E+03 0.024 25.6 12.6 69 254-325 124-196 (380)
262 PRK08279 long-chain-acyl-CoA s 20.5 5.7E+02 0.012 29.9 10.5 85 406-495 62-148 (600)
263 PRK09331 Sep-tRNA:Cys-tRNA syn 20.5 7E+02 0.015 27.4 10.6 70 254-326 99-180 (387)
264 PRK11904 bifunctional proline 20.1 4.7E+02 0.01 33.2 9.8 90 430-532 686-782 (1038)
No 1
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3.5e-102 Score=920.55 Aligned_cols=656 Identities=90% Similarity=1.513 Sum_probs=566.8
Q ss_pred CCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCc-ccccccccccCCCcccccCCCCcccH
Q 004034 123 ENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQ-RVCSENLDVRKGNVKIEWFKGGITNI 201 (778)
Q Consensus 123 ~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wf~~~~~n~ 201 (778)
+..+.++++.|+..+..+++.+|+++++++++||+.||.++++.+.|.++++. .++..+.+++.++++++||+++++|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~wf~g~~~N~ 89 (666)
T PLN02654 10 ENDLVFPSKDFSAQALVSSPQQYMEMYKRSVDDPAGFWSDIASQFYWKQKWEGDEVCSENLDVRKGPISIEWFKGGKTNI 89 (666)
T ss_pred cCcccCCCHHHHhhccCCCHHHHHHHHHHHhcCHHHHHHHHHHhCCeecCCCcceEeccCCCcccCCccccccCCCEeeH
Confidence 33456899999998888888999999999999999999999988999988742 24422333444445679999999999
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
++++|+++++..+|+++|+++..++.+..+++||+||.++++++|+.|+++|+++||+|+|++||++|+++++|||+++|
T Consensus 90 ~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~G 169 (666)
T PLN02654 90 CYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIG 169 (666)
T ss_pred HHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 99999999862489999999865444556899999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++.++|++++|++||+++...+..+.+.++..++.++.........+..++.++...........+.
T Consensus 170 av~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (666)
T PLN02654 170 AVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQ 249 (666)
T ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccc
Confidence 99999999999999999999999999999999888888888888887766543111122233343332211000012223
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchh
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 441 (778)
..++.+|++.+...+...+...+.++|++||+|||||||+||||+++|++++......+...++++++|++++.+|++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 329 (666)
T PLN02654 250 EGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWI 329 (666)
T ss_pred cCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhh
Confidence 33455666665443333344557889999999999999999999999999877766667778999999999999999999
Q ss_pred hhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCC
Q 004034 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (778)
Q Consensus 442 ~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (778)
+|+.+.++++|+.|++++++++.+.++++..+|++|++++||+++++|++++.|++...+.....++++||.++++||++
T Consensus 330 ~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l 409 (666)
T PLN02654 330 TGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPI 409 (666)
T ss_pred hhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCC
Confidence 99888899999999999999987777899999999999999999999999999998765434566889999999999999
Q ss_pred CHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCC
Q 004034 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 601 (778)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~ 601 (778)
++++++|+.+.+|..++++.+.||+||+++..+...++..+.+++++|+|++|++++|+|++|++++.++.|||+|++||
T Consensus 410 ~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~Gel~v~~~~ 489 (666)
T PLN02654 410 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECSGYLCVKKSW 489 (666)
T ss_pred CHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCCceEEEEcCCC
Confidence 99999999999986668999999999999876655444345678999999999999999999999999999999999999
Q ss_pred CcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEE
Q 004034 602 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 681 (778)
Q Consensus 602 p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~ 681 (778)
|++++|||++++++...|+...+|||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+||+|.||+|+++
T Consensus 490 p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaaVvg~ 569 (666)
T PLN02654 490 PGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGI 569 (666)
T ss_pred chhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEee
Confidence 99999999999999999887778999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcCCCCC
Q 004034 682 EHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTS 761 (778)
Q Consensus 682 ~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~ 761 (778)
+++..++.+++||+++++...++++.++|+++|+++|+.|++|+.|+++++||+|+||||+|+.|++++.++..++++.+
T Consensus 570 ~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~~~~~~~~~ 649 (666)
T PLN02654 570 EHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTS 649 (666)
T ss_pred EcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCCCCCCCCcc
Confidence 99988999999999998876667788899999999999999999999999999999999999999999987544678999
Q ss_pred CCCChhhHHHHHhhhcC
Q 004034 762 TLADPGVVDQLIALADC 778 (778)
Q Consensus 762 ~~~~~~~~~~~~~~~~~ 778 (778)
|++||+++++++++++.
T Consensus 650 ~~~~~~~~~~~~~~~~~ 666 (666)
T PLN02654 650 TLADPGVVDQLIALADS 666 (666)
T ss_pred cccCHHHHHHHHHhhcC
Confidence 99999999999998863
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=3.2e-100 Score=849.28 Aligned_cols=521 Identities=47% Similarity=0.773 Sum_probs=484.8
Q ss_pred ccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCChHH
Q 004034 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMEL 270 (778)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~~s~e~ 270 (778)
+||.++.+|.++|+++++.+...+|++|++|.+++.+. +++||+||.++++++|+.|++ .|| +||||+|+||+.+|+
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~~~~~~~~aii~~~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~ 78 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLEADRPDDTAIIFDGEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA 78 (528)
T ss_pred CCcCCceeechhhhhhhhhhccCCCceEEEEEcCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH
Confidence 59999999999999999987456899999999776444 999999999999999999987 578 999999999999999
Q ss_pred HHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccC
Q 004034 271 PIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQ 350 (778)
Q Consensus 271 vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~ 350 (778)
+++||||+|+||+++|+++.++++.++++++++++|+||+++...++++.+.++..+++++.. ++++++.
T Consensus 79 ~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~----------~iv~~r~ 148 (528)
T COG0365 79 VIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS----------VVVVPRL 148 (528)
T ss_pred HHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc----------eEEeccc
Confidence 999999999999999999999999999999999999999999999999999998887775432 4444432
Q ss_pred CccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCc
Q 004034 351 SAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSD 430 (778)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d 430 (778)
. ++|++.++..+..++....+++|++||+|||||||+||||+|+|++++.......+..+++.++|
T Consensus 149 ~--------------~~~~~~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~D 214 (528)
T COG0365 149 G--------------LWYDEAVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGD 214 (528)
T ss_pred c--------------ccHHHHhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCC
Confidence 1 66788887777777777799999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCc
Q 004034 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKS 510 (778)
Q Consensus 431 ~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~s 510 (778)
++++.++++|++|+.+.+|++|++|+|++++++.+.+ +++++|++|++|+||.++++|++++.|++.+. ..++++++
T Consensus 215 v~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~-~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~--~~~~dlss 291 (528)
T COG0365 215 RFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFY-SPERLWEALEKYKVTIFGTSPTFLRRLMKLGL--GEPYDLSS 291 (528)
T ss_pred EEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCC-CHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC--cccccchh
Confidence 9999999999999999999999999999999999888 89999999999999999999999999999986 67789999
Q ss_pred eeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCC
Q 004034 511 LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE 590 (778)
Q Consensus 511 Lr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g 590 (778)
||.+.+.||||++++|+|+.+.+| ++|.+.||+||++++.+...+ +.++++.|+|+||+++.|+|++|+++++|
T Consensus 292 Lr~~~SaGEPLnpe~~~w~~~~~g---~~i~d~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~g~~~~~~ 365 (528)
T COG0365 292 LRVLGSAGEPLNPEAFEWFYSALG---VWILDIYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDEGNPVPPG 365 (528)
T ss_pred heeeeccCCCCCHHHHHHHHHHhC---CCEeccccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCCCCcCCCC
Confidence 999999999999999999999998 899999999999966665544 45666679999999999999999999999
Q ss_pred eeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcC
Q 004034 591 CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSH 670 (778)
Q Consensus 591 ~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~ 670 (778)
+ |+|+|+.|||+++++||+|+++|.+.|+.. ||+|||.+++|+||++||+||.||+||++|+||+|.|||++|.+|
T Consensus 366 ~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~---~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 366 V-GELVVRLPWPGMALTYWNDPERYKEAYFGR---WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred c-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc---eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhC
Confidence 9 999999999999999999999999999863 999999999999999999999999999999999999999999999
Q ss_pred CccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHH
Q 004034 671 PQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 750 (778)
Q Consensus 671 p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~ 750 (778)
|+|.||+||+++|+.+|+.++|||+++++...+ +++++|++++++.+.+++.|+.|+++++||||+||||+|+.||+++
T Consensus 442 P~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~-~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~ 520 (528)
T COG0365 442 PAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPN-ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKIL 520 (528)
T ss_pred cceeeeEEEeccCCCCCcEEEEEEEecCCCChH-HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHH
Confidence 999999999999999999999999999998877 9999999999999988999999999999999999999999999998
Q ss_pred hc
Q 004034 751 SR 752 (778)
Q Consensus 751 ~~ 752 (778)
.+
T Consensus 521 ~~ 522 (528)
T COG0365 521 HK 522 (528)
T ss_pred hh
Confidence 73
No 3
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-97 Score=827.11 Aligned_cols=614 Identities=57% Similarity=0.943 Sum_probs=561.9
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEE
Q 004034 141 SPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAI 220 (778)
Q Consensus 141 ~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al 220 (778)
...+|+.+++++++||+.||.+++++++|...+.. . +.....+...++||+++.+|.++|+++++.....+|++|+
T Consensus 9 ~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~w~~g~~ln~~~n~~~~~~~~~~~~~~a~ 84 (626)
T KOG1175|consen 9 SLSSYREFYRFSVEDPERFWGEVAKELHWKFPWPR-C---NKDENKGNPFTKWFPGAFLNACYNCLDRHIKEKGGDKVAI 84 (626)
T ss_pred CHHHHHHHHhhcccCHHHHHHHhhhhhhcccCccc-c---ccccccCCCCccccccchhhhhHhhhhhhhhhcCCCCcEE
Confidence 47899999999999999999999888777666552 1 1122333445799999999999999999977445999999
Q ss_pred EEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHH
Q 004034 221 YWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRI 300 (778)
Q Consensus 221 ~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l 300 (778)
++.....+....+||.||.+++.++|..|++.|+++||+|+++||+.+|++++||||+++|++++++..++++..+..+|
T Consensus 85 ~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl 164 (626)
T KOG1175|consen 85 IFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRL 164 (626)
T ss_pred EEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHH
Confidence 99988776667799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCC
Q 004034 301 MDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCE 380 (778)
Q Consensus 301 ~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 380 (778)
+++++|+|+|.+...+..+.+.++..+++++..+..........+.+.+. .++++|+..+....+..+
T Consensus 165 ~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~------------~~d~~~~~~~~~a~~~~~ 232 (626)
T KOG1175|consen 165 QDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRR------------NRDLFWSLELKKASPEHP 232 (626)
T ss_pred HhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecc------------cccccHHHHhhhcCCCCC
Confidence 99999999999999999999999999988877663222222223333222 137788888888888888
Q ss_pred ccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEE
Q 004034 381 VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (778)
Q Consensus 381 ~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl 460 (778)
+.+.+.+|+.||+|||||||.|||+.|++++++...+...+..++++++|+++++++++|++|+.+.++++|++|+|+++
T Consensus 233 ~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl 312 (626)
T KOG1175|consen 233 CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVL 312 (626)
T ss_pred ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcce
Q 004034 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPI 540 (778)
Q Consensus 461 ~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i 540 (778)
+++.+. ++..+|+++.+|+||++++.|++++.|.+........+++++||.+.++||++.++.++|+.+.++. .+|
T Consensus 313 ~~g~p~--~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~--~pv 388 (626)
T KOG1175|consen 313 YEGPPF--DPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGL--DPI 388 (626)
T ss_pred EcCCCC--ChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCc--cch
Confidence 998765 9999999999999999999999999999888776777777889999999999999999999999985 279
Q ss_pred ecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCC-eeeEEEEecCCC-cccccccCChhhhhhh
Q 004034 541 SDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE-CSGYLCIKSSWP-GAFRTLYGDHERYETT 618 (778)
Q Consensus 541 ~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g-~~GEL~v~g~~p-~v~~gY~~~~~~~~~~ 618 (778)
++.||+||+|+.++...++..+.++++++.|++|+.+.|+|++|++++++ +.|+|+++.||| +++++||+|+++|...
T Consensus 389 ~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~ 468 (626)
T KOG1175|consen 389 YETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAA 468 (626)
T ss_pred hhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhh
Confidence 99999999999988877766578999999999999999999999999987 899999999999 9999999999999999
Q ss_pred ccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcC
Q 004034 619 YFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE 698 (778)
Q Consensus 619 ~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~ 698 (778)
||.+++|+|+|||.+++|+||++|++||+||+|+++|+||+++|||++|.+||.|.|++||+.+|+.+||.++|||++++
T Consensus 469 yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~ 548 (626)
T KOG1175|consen 469 YFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKS 548 (626)
T ss_pred hcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcCCCCCCCCChhhHHHHHhhh
Q 004034 699 GVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 776 (778)
Q Consensus 699 ~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (778)
+....+++.++|+++||+.+.+++.|+.|++++.||+|+||||+||+||+++.++ ++++++|++||++++.+++..
T Consensus 549 g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~--~~~d~st~~dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 549 GSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK--AVGDTSTLADPSVIDHLRSIL 624 (626)
T ss_pred CCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC--ccccccccCChHHHHHHHHhh
Confidence 9888899999999999999999999999999999999999999999999999988 789999999999999999864
No 4
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=7.7e-96 Score=863.78 Aligned_cols=618 Identities=61% Similarity=1.100 Sum_probs=544.7
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHhh-cccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEE
Q 004034 142 PQKYLEMYKRSVEDPAGFWADIASE-FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAI 220 (778)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al 220 (778)
+++|+++++++++||+.||.+++++ +.|.++|.+ +++.. .+.+.+||+++++|+++++|+++++ .+||++|+
T Consensus 4 ~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~Al 76 (625)
T TIGR02188 4 LEQYKELYEESIEDPDKFWAKLARELLDWFKPFTK-VLDWS-----FPPFYKWFVGGELNVSYNCVDRHLE-ARPDKVAI 76 (625)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhcCceecCCce-eecCC-----CCCCCeeCCCCEEEHHHHHHHHhhc-cCCCCeEE
Confidence 6899999999999999999999987 889998887 54211 1224699999999999999999998 89999999
Q ss_pred EEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHH
Q 004034 221 YWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRI 300 (778)
Q Consensus 221 ~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l 300 (778)
++.+++.+..+++||+||+++++++|+.|+++|+++||+|+|+++|++|+++++|||+++|++++|++|+++.+++.+++
T Consensus 77 ~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l 156 (625)
T TIGR02188 77 IWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRI 156 (625)
T ss_pred EEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHH
Confidence 99765334568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCC-CccEEEEEccCCccccccccCCCCcccchhhccCCCCCCC
Q 004034 301 MDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI-SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKC 379 (778)
Q Consensus 301 ~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 379 (778)
++++++++|+++...+..+.+.++..+++++..+ + .++.+++++.... ...+....+.+|++.+.......
T Consensus 157 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 228 (625)
T TIGR02188 157 NDAGAKLVITADEGLRGGKVIPLKAIVDEALEKC----PVSVEHVLVVRRTGN----PVPWVEGRDVWWHDLMAKASAYC 228 (625)
T ss_pred HhcCCCEEEEcCccccCCcccchHHHHHHHHHhC----CCCccEEEEEcCCCC----CcCccccccccHHHHHhhcCCCC
Confidence 9999999999998888888888888887776654 3 4666666654321 11222334556666655444344
Q ss_pred CccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEE
Q 004034 380 EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVV 459 (778)
Q Consensus 380 ~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlv 459 (778)
++....++++++|+|||||||+||||+++|++++.+........+++.++|++++.++++|++++.+.++++|.+|++++
T Consensus 229 ~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~v 308 (625)
T TIGR02188 229 EPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTV 308 (625)
T ss_pred CceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEE
Confidence 45567889999999999999999999999999877666666777899999999999999999998888999999999999
Q ss_pred EEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcc
Q 004034 460 VFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCP 539 (778)
Q Consensus 460 l~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~ 539 (778)
++++.+..+++..++++|+++++|+++++|++++.|.+.......+.++++||.++++||++++++++++.+.++..+++
T Consensus 309 l~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~ 388 (625)
T TIGR02188 309 MFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCP 388 (625)
T ss_pred EECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCc
Confidence 99887777799999999999999999999999999998765444456789999999999999999999999999866689
Q ss_pred eecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeC-CCeeeEEEEecCCCcccccccCChhhhhhh
Q 004034 540 ISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIE-GECSGYLCIKSSWPGAFRTLYGDHERYETT 618 (778)
Q Consensus 540 i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~-~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~ 618 (778)
+++.||+||+++.++...++..+.+++++|+|++|++++|+|++|++++ .|+.|||+|++|||++++|||++++++...
T Consensus 389 i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~ 468 (625)
T TIGR02188 389 IVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDT 468 (625)
T ss_pred eEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHH
Confidence 9999999999987665544433467889999999999999999999999 899999999999999999999999999999
Q ss_pred ccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcC
Q 004034 619 YFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE 698 (778)
Q Consensus 619 ~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~ 698 (778)
|+...+|||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+||+|.||+|++++++..++.++|||++++
T Consensus 469 ~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~ 548 (625)
T TIGR02188 469 YFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKD 548 (625)
T ss_pred HhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCC
Confidence 88777899999999999999999999999999999999999999999999999999999999999988999999999998
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcCCCCCCCCChhhHHHHHh
Q 004034 699 GVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIA 774 (778)
Q Consensus 699 ~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (778)
+...++++.++|+++++++|+++++|+.|+++++||+|+||||+|+.|++++.++....++.++++||++++++++
T Consensus 549 ~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 549 GYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEEEILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCcccccCHHHHHHHHh
Confidence 7766666788999999999999999999999999999999999999999998865333678999999999999975
No 5
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6e-94 Score=849.26 Aligned_cols=626 Identities=61% Similarity=1.079 Sum_probs=541.8
Q ss_pred hhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhc
Q 004034 133 FSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEA 212 (778)
Q Consensus 133 f~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~ 212 (778)
|...+.. .+++|++++++++++|++||.++++++.|.++|++ +++. .+.+.+||+++.+|.++++|+++++
T Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~------~~~~~~w~~~~~~n~~~~~l~~~~~- 78 (637)
T PRK00174 8 FAANALI-DMEQYKALYQESVEDPEGFWAEQAKRLDWFKPFDT-VLDW------NAPFIKWFEDGELNVSYNCLDRHLK- 78 (637)
T ss_pred HHhhcCC-ChHHHHHHHHHHhcCHHHHHHHHHHhcCeecCCcc-cccC------CCCCCccCCCCEeEHHHHHHHHhhc-
Confidence 3333444 36899999999999999999999877999999887 5422 2235699999999999999999998
Q ss_pred cCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCC
Q 004034 213 GLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFS 292 (778)
Q Consensus 213 ~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~ 292 (778)
++||++|+++.+++.+..+++||+||+++++++|+.|+++|+++||+|+|+++|++++++++|||+++|++++|++|.++
T Consensus 79 ~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~ 158 (637)
T PRK00174 79 TRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFS 158 (637)
T ss_pred cCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCC
Confidence 89999999987543334678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhcc
Q 004034 293 SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVV 372 (778)
Q Consensus 293 ~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l 372 (778)
.+++.+++++++++++|+++...+..+.+.+...+.+.+..+ +.++.+++++.... ...+....+.+|++..
T Consensus 159 ~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 230 (637)
T PRK00174 159 AEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANC----PSVEKVIVVRRTGG----DVDWVEGRDLWWHELV 230 (637)
T ss_pred HHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhC----CCccEEEEEcCCCC----CcCcCCCCcccHHHHH
Confidence 999999999999999999988777777777777776665544 45566666554321 1122223445566655
Q ss_pred CCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHH
Q 004034 373 PKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPM 452 (778)
Q Consensus 373 ~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L 452 (778)
.......+.....++|++||+|||||||+||||+++|++++.+........+++.++|++++.++++|+.++.+.++.+|
T Consensus 231 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l 310 (637)
T PRK00174 231 AGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPL 310 (637)
T ss_pred hhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHH
Confidence 44333344455678999999999999999999999999977666666666789999999999999999999888899999
Q ss_pred hcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHH
Q 004034 453 LNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNV 532 (778)
Q Consensus 453 ~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (778)
++|++++++++.+..+++..++++|++++||++.++|++++.|++.........++++||.++++||++++++++++.+.
T Consensus 311 ~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~ 390 (637)
T PRK00174 311 ANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKV 390 (637)
T ss_pred HcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHH
Confidence 99999999987766778999999999999999999999999998875433344578899999999999999999999999
Q ss_pred hCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCCh
Q 004034 533 VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDH 612 (778)
Q Consensus 533 ~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~ 612 (778)
++..++++++.||+||+++..+...++....+++++|+|++|++++|+|++|++++.|+.|||+|+||+|++++|||+++
T Consensus 391 ~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~ 470 (637)
T PRK00174 391 VGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEGGNLVIKDPWPGMMRTIYGDH 470 (637)
T ss_pred hCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCcEEEEEcCCCCcccccccCCH
Confidence 88656899999999999986654443333446788999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEE
Q 004034 613 ERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYA 692 (778)
Q Consensus 613 ~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva 692 (778)
+++.+.++...+|||+|||+|++|+||+++|+||.||+||++|+||+|.|||++|.+||+|.+|+|++++++..++.++|
T Consensus 471 ~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a 550 (637)
T PRK00174 471 ERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYA 550 (637)
T ss_pred HHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEE
Confidence 99999988767899999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcCCCCCCCCChhhHHHH
Q 004034 693 FVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQL 772 (778)
Q Consensus 693 ~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 (778)
||++.++...++++.++|+++++++|+.|++|..|+++++||+|+|||++|+.|+++..+.. ..++.++++||++++++
T Consensus 551 ~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~-~~~~~~~~~~~~~~~~~ 629 (637)
T PRK00174 551 FVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE-ILGDTSTLADPSVVEKL 629 (637)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC-CCCCcccccCHHHHHHH
Confidence 99998876555666789999999999999999999999999999999999999999987653 46789999999999999
Q ss_pred Hhhh
Q 004034 773 IALA 776 (778)
Q Consensus 773 ~~~~ 776 (778)
++..
T Consensus 630 ~~~~ 633 (637)
T PRK00174 630 IEAR 633 (637)
T ss_pred HHHH
Confidence 9864
No 6
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.6e-93 Score=840.51 Aligned_cols=614 Identities=39% Similarity=0.711 Sum_probs=526.9
Q ss_pred HHHHHHHHHhhCHHHHHHHHHhhcccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEE
Q 004034 144 KYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWE 223 (778)
Q Consensus 144 ~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~ 223 (778)
+|.++++++++||+.||.++++.+.|.+++++ +++.+ ...+.+||.++.+|.++++|+++++ .+|+++|+++.
T Consensus 2 ~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~Al~~~ 74 (628)
T TIGR02316 2 RYEEFYQRSIEQPEAFWAEQARRIDWQTPPQR-ILDYS-----NPPFARWFAGGRTNLCHNALDRHLD-ERGEQLALVTV 74 (628)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHhCCeecCCcc-cccCC-----CCCcCccCCCCEeeHHHHHHHHHhC-cCCCCeEEEEE
Confidence 48899999999999999999988999999887 54211 2234699999999999999999987 89999999986
Q ss_pred cCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhc
Q 004034 224 ANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDC 303 (778)
Q Consensus 224 ~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~ 303 (778)
+.+.+..+++||+||+++++++|++|+++||++||+|+|+++|++|+++++|||+++|++++|+++.++.+++.++|+++
T Consensus 75 ~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~ 154 (628)
T TIGR02316 75 SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDA 154 (628)
T ss_pred cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhc
Confidence 54434578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCCC-CCCCcc
Q 004034 304 KPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP-TKCEVE 382 (778)
Q Consensus 304 ~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~ 382 (778)
++++||+++...+..+.+.++..+++++.... .....+++++.... .......++..|.+...... ...+..
T Consensus 155 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (628)
T TIGR02316 155 TPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQ---HPPPHVLLVDRGLA----PMRLIPGRDVDYAALRTQHEDAQVPVE 227 (628)
T ss_pred CceEEEECCccccCCcccccHHHHHHHHHhcC---CCCCEEEEEeCCCC----CcCcccCccccHHHHhhccccCCCCce
Confidence 99999999988888888888888777665431 23455666654321 11112223455665544321 223344
Q ss_pred ccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 383 WVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 383 ~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
...+++++||+|||||||+||||+++|++++..........++++++|++++.++++|++++.+.++++|+.|+++++++
T Consensus 228 ~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~ 307 (628)
T TIGR02316 228 WLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYE 307 (628)
T ss_pred ecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeC
Confidence 56789999999999999999999999999776666667777899999999999999999998888999999999999998
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceec
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD 542 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~ 542 (778)
+.+..+++..++++|++++||+++++|++++.|.+.........++++||.+++|||++++++++++.+.++ .++++
T Consensus 308 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~---~~~~~ 384 (628)
T TIGR02316 308 GLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLG---KPVID 384 (628)
T ss_pred CCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHhC---CCEEe
Confidence 877777999999999999999999999999999887543344567899999999999999999999999887 67999
Q ss_pred ccccccccceecccCCCC--CCCCCCCcCcCcCCceEEEECC-CCceeCCCeeeEEEEecCCC-cccccccCChhhhhhh
Q 004034 543 TWWQTETGGFMITPLPGA--WPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWP-GAFRTLYGDHERYETT 618 (778)
Q Consensus 543 ~YG~TE~g~~~~~~~~~~--~~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p-~v~~gY~~~~~~~~~~ 618 (778)
.||+||++..++....+. .+...+++|+|++|++++|+|+ +|++++.|+.|||+|+||++ +++.|||++++++.+.
T Consensus 385 ~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~ 464 (628)
T TIGR02316 385 NYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKT 464 (628)
T ss_pred cccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHh
Confidence 999999986544332221 1345688999999999999998 79999999999999999763 7899999999999988
Q ss_pred ccCCC-CCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEc
Q 004034 619 YFKPF-PGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLV 697 (778)
Q Consensus 619 ~~~~~-~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~ 697 (778)
|+... ++||+|||+|++|+||+++|+||.||+||++|+||+|.|||++|.+||+|.||+|++++++..++.+++||+++
T Consensus 465 ~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~ 544 (628)
T TIGR02316 465 YWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILK 544 (628)
T ss_pred hhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEc
Confidence 87533 45999999999999999999999999999999999999999999999999999999999998899999999988
Q ss_pred CCCCC-----CHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcCCCCCCCCChhhHHHH
Q 004034 698 EGVPY-----SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQL 772 (778)
Q Consensus 698 ~~~~~-----~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 (778)
++... .+.+.++|+++++++|++|++|+.|+++++||+|+||||+|+.|++++.+. ..++.++++||++++++
T Consensus 545 ~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~--~~~~~~~~~~~~~~~~~ 622 (628)
T TIGR02316 545 ESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGR--DPGDLTTIDDPGALEQV 622 (628)
T ss_pred CCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCC--CCCCcccccCHHHHHHH
Confidence 65432 235678999999999999999999999999999999999999999998765 36789999999999999
Q ss_pred Hhhh
Q 004034 773 IALA 776 (778)
Q Consensus 773 ~~~~ 776 (778)
++..
T Consensus 623 ~~~~ 626 (628)
T TIGR02316 623 RRAM 626 (628)
T ss_pred HHHh
Confidence 8864
No 7
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-92 Score=833.70 Aligned_cols=616 Identities=27% Similarity=0.448 Sum_probs=510.9
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHhh-cccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhcc--CCCe
Q 004034 141 SPQKYLEMYKRSVEDPAGFWADIASE-FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAG--LGDK 217 (778)
Q Consensus 141 ~~~~~~~ll~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~--~pd~ 217 (778)
.+++|+++++++++||+.||.++++. +.|.+++.+ +++. .+.+++||+++++|+++++|++++. . +||+
T Consensus 6 ~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~-~~~~------~~~~~~wf~~~~~n~~~~~l~~~~~-~~~~~~~ 77 (647)
T PTZ00237 6 DPFDYENDSNYANSNPESFWDEVAKKYVHWDKMYDK-VYSG------DEIYPDWFKGGELNTCYNVLDIHVK-NPLKRDQ 77 (647)
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHhcCeeeCCccc-ccCC------CCCchhhCCCCeeeHHHHHHHHhhc-ccCCCCc
Confidence 36889999999999999999999988 899999887 5422 1223699999999999999999886 4 7999
Q ss_pred EEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHH
Q 004034 218 VAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLA 297 (778)
Q Consensus 218 ~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~ 297 (778)
+|+++..++.+..+++||+||+++++++|+.|+++||++||+|+|++||++|+++++|||+++|++++|++++++++++.
T Consensus 78 ~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~ 157 (647)
T PTZ00237 78 DALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLI 157 (647)
T ss_pred eEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHH
Confidence 99999754433357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccc----cC-CCCcccchhhcc
Q 004034 298 QRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENT----KW-QDGRDIWWQDVV 372 (778)
Q Consensus 298 ~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----~~-~~~~~~~~~~~l 372 (778)
++|++++|++||+++...+..+.+.+...+.+++... .....+++.+........... .. .......|++.+
T Consensus 158 ~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (647)
T PTZ00237 158 DRIETITPKLIITTNYGILNDEIITFTPNLKEAIELS---TFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEI 234 (647)
T ss_pred HHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcc---cCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHH
Confidence 9999999999999987777777777777666655421 012345554422110000000 00 001234455544
Q ss_pred CCC-----CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHH
Q 004034 373 PKY-----PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYV 447 (778)
Q Consensus 373 ~~~-----~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~ 447 (778)
... ....+....+++|+++|+|||||||+||||+++|++++......+...++..++|++++.++++|++++ ..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~-~~ 313 (647)
T PTZ00237 235 KKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFH-GF 313 (647)
T ss_pred hhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeH-HH
Confidence 321 111234556789999999999999999999999999665555555556778889999999999999875 46
Q ss_pred HHHHHhcCcEEEEEcCCCCCC--ChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcc---cccCCCCceeEEEEecCCCC
Q 004034 448 TYGPMLNGASVVVFEGAPTYP--DSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY---VTRYSRKSLRVLGSVGEPIN 522 (778)
Q Consensus 448 i~~~L~~G~tlvl~~~~~~~~--~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~---~~~~~l~sLr~v~~gGe~l~ 522 (778)
++++|+.|++++++++....+ .+..+|+.|++++||+++++|++++.|++..... ...+++++||.++++||+++
T Consensus 314 ~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~ 393 (647)
T PTZ00237 314 LYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIE 393 (647)
T ss_pred HHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCC
Confidence 889999999999998743222 2688999999999999999999999998764321 23457899999999999999
Q ss_pred HHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCC
Q 004034 523 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP 602 (778)
Q Consensus 523 ~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p 602 (778)
+++++++++.+| +++++.||+||++++.+.... ......+++|+|++|++++|+|++|++++.|+.|||+|++|+|
T Consensus 394 ~~~~~~~~~~~g---~~i~~~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~GEl~v~~p~~ 469 (647)
T PTZ00237 394 ESIPEYIENKLK---IKSSRGYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSILSEDGKELNVNEIGEVAFKLPMP 469 (647)
T ss_pred HHHHHHHHHhcC---CCEEeeechHHhChhhhccCC-CCCCCCCCCccCcCCceEEEECCCCCCCCCCCceEEEEeccCC
Confidence 999999999887 789999999999865543322 1122347899999999999999999999999999999999874
Q ss_pred -cccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEE
Q 004034 603 -GAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 681 (778)
Q Consensus 603 -~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~ 681 (778)
+++.|||++++++.. +|...+|||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+||.|.||+|+++
T Consensus 470 p~~~~gy~~~~~~~~~-~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~eaavvg~ 548 (647)
T PTZ00237 470 PSFATTFYKNDEKFKQ-LFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLECCSIGI 548 (647)
T ss_pred chhhCceeCCHHHHHH-HHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCceeeEEEee
Confidence 999999999999985 555568999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEEEEcCCC---CCC-HHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcC
Q 004034 682 EHEVKGQGIYAFVTLVEGV---PYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDEL 757 (778)
Q Consensus 682 ~~~~~~~~lva~Vv~~~~~---~~~-~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~ 757 (778)
+++..++.++|||+++++. ..+ +++.++|+++++++|++|++|+.|+++++||+|+||||+|+.|++++++. +.
T Consensus 549 ~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~--~~ 626 (647)
T PTZ00237 549 YDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDS--NY 626 (647)
T ss_pred EcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCC--CC
Confidence 9998899999999998542 222 46778999999999999999999999999999999999999999999765 46
Q ss_pred CCCCCCCChhhHHHHHhh
Q 004034 758 GDTSTLADPGVVDQLIAL 775 (778)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~ 775 (778)
++++|++|++++++|++.
T Consensus 627 ~~~~~~~~~~~~~~~~~~ 644 (647)
T PTZ00237 627 QLPDNVNDSEIFYKIKEL 644 (647)
T ss_pred CCCccccCHHHHHHHHHH
Confidence 789999999999999875
No 8
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-91 Score=824.52 Aligned_cols=614 Identities=39% Similarity=0.710 Sum_probs=526.0
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHhhcccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEE
Q 004034 143 QKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYW 222 (778)
Q Consensus 143 ~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~ 222 (778)
++|.++++++++||+.||.++++.+.|.+++.+ +++.+ .+.+++||+++++|+++++|+++++ .+|+++|+++
T Consensus 2 ~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~A~~~ 74 (629)
T PRK10524 2 MSYSEFYQRSIDDPEAFWAEQARRIDWQTPFTQ-VLDYS-----NPPFARWFVGGRTNLCHNAVDRHLA-KRPEQLALIA 74 (629)
T ss_pred hhHHHHHHHHhcCHHHHHHHHHHhCCcccCchh-hccCC-----CCCcCccCCCcEeeHHHHHHHHhhc-cCCCCeEEEE
Confidence 569999999999999999999988999999887 64221 2234699999999999999999987 8999999998
Q ss_pred EcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHh
Q 004034 223 EANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMD 302 (778)
Q Consensus 223 ~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~ 302 (778)
.+.+.+..+++||+||+++++++|+.|+++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++|++
T Consensus 75 ~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~ 154 (629)
T PRK10524 75 VSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDD 154 (629)
T ss_pred EcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHh
Confidence 65433446899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCCC-CCCCc
Q 004034 303 CKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP-TKCEV 381 (778)
Q Consensus 303 ~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 381 (778)
++++++|+++...++.+.+.+++.+++++..+. .....+++++.... ........+..|.+...... ...+.
T Consensus 155 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (629)
T PRK10524 155 AKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQ---HKPRHVLLVDRGLA----PMARVAGRDVDYATLRAQHLGARVPV 227 (629)
T ss_pred cCCcEEEEccCcccCCcccccHHHHHHHHHhcC---CCCCEEEEEeCCCC----CcCcccCCcccHHHHHhcCCCCCCCc
Confidence 999999999988888888888887777665431 23455666553211 11122223445555443321 22333
Q ss_pred cccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 382 EWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 382 ~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
....+++++||+|||||||+||||+++|++++......+...+++.++|++++.++++|++++.+.++++|+.|++++++
T Consensus 228 ~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~ 307 (629)
T PRK10524 228 EWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMY 307 (629)
T ss_pred eeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEE
Confidence 45678999999999999999999999999987777766777789999999999999999999888899999999999999
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCccee
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~ 541 (778)
++.+..+++..++++|+++++|+++++|++++.|.+.........++++||.+++|||++++++++++.+.++ ++++
T Consensus 308 ~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~---~~v~ 384 (629)
T PRK10524 308 EGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEALG---VPVI 384 (629)
T ss_pred CCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhcC---CCeE
Confidence 8877778999999999999999999999999999886543334567899999999999999999999999886 6899
Q ss_pred cccccccccceecccCCC--CCCCCCCCcCcCcCCceEEEECC-CCceeCCCeeeEEEEecCCC-cccccccCChhhhhh
Q 004034 542 DTWWQTETGGFMITPLPG--AWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWP-GAFRTLYGDHERYET 617 (778)
Q Consensus 542 ~~YG~TE~g~~~~~~~~~--~~~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p-~v~~gY~~~~~~~~~ 617 (778)
+.||+||++..++....+ ..+.+++++|+|++|++++|+|+ +|++++.|+.|||+|+||++ ++++|||++++++..
T Consensus 385 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~ 464 (629)
T PRK10524 385 DNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVK 464 (629)
T ss_pred eccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHH
Confidence 999999998543332221 12345788999999999999998 99999999999999999763 789999999999998
Q ss_pred hccCCC-CCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEE
Q 004034 618 TYFKPF-PGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 696 (778)
Q Consensus 618 ~~~~~~-~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 696 (778)
.|+... +|||+|||+|++|+||+++|+||.||+||++|+||+|.|||++|.+||+|.||+|++++++..++.+++||++
T Consensus 465 ~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~ 544 (629)
T PRK10524 465 TYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVP 544 (629)
T ss_pred hhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEE
Confidence 887543 4799999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred cCCCCC-----CHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcCCCCCCCCChhhHHH
Q 004034 697 VEGVPY-----SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQ 771 (778)
Q Consensus 697 ~~~~~~-----~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (778)
+++... .+++.++|+++++++|+.|++|..|+++++||+|+|||++|+.|++++.++ ..++.++++||+++++
T Consensus 545 ~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~--~~~~~~~~~~~~~~~~ 622 (629)
T PRK10524 545 KDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGR--DPGDLTTIEDPAALQQ 622 (629)
T ss_pred CCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC--CCCCcccccCHHHHHH
Confidence 865432 235678999999999999999999999999999999999999999998765 4678999999999999
Q ss_pred HHhh
Q 004034 772 LIAL 775 (778)
Q Consensus 772 ~~~~ 775 (778)
+++.
T Consensus 623 ~~~~ 626 (629)
T PRK10524 623 IRQA 626 (629)
T ss_pred HHHH
Confidence 9875
No 9
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=3.8e-90 Score=816.46 Aligned_cols=610 Identities=23% Similarity=0.409 Sum_probs=514.7
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHhh--cccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEE
Q 004034 142 PQKYLEMYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVA 219 (778)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~A 219 (778)
+..|.++++++++||+.||.++++. +.|.++|.+ +++.. .+.+++||+++++|.+++++++ .++++|
T Consensus 34 ~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~~~~-----~~~~~a 102 (652)
T TIGR01217 34 EGGYDALHRWSVDELDTFWKAVWEWFDVRFSTPCAR-VVDDR-----TMPGAQWFPGARLNYAENLLRA-----AGTEPA 102 (652)
T ss_pred hhhHHHHHHHHHhCHHHHHHHHHHhCCcceeCCCce-eeeCC-----CCCCCEECCCCeeeHHHHHhcc-----CCCCeE
Confidence 4789999999999999999999887 899998887 54211 1224699999999999999873 458999
Q ss_pred EEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHH
Q 004034 220 IYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQR 299 (778)
Q Consensus 220 l~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~ 299 (778)
+++.+++ +..+++||+||.++++++|+.|+++|+++||+|+|+++|++|+++++|||+++|++++|++|.++++++.++
T Consensus 103 ~~~~~~~-~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~ 181 (652)
T TIGR01217 103 LLYVDET-HEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDR 181 (652)
T ss_pred EEEECCC-CCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHH
Confidence 9997543 445789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCC-CCC
Q 004034 300 IMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTK 378 (778)
Q Consensus 300 l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 378 (778)
|++++|++||+++...++++.+.....+.++...+ +.++.+++++....... ... ...+...|++.+... ...
T Consensus 182 l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 255 (652)
T TIGR01217 182 FQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKEL----PTLRAVVHIPYLGPRET-EAP-KIDGALDLEDFTAAAQAAE 255 (652)
T ss_pred HHhcCCcEEEEccccccCCcccchHHHHHHHHhcC----CCccEEEEEeCCCCccc-ccc-cccCcccHHHHHhcccCCC
Confidence 99999999999998888888888888777766554 45566666543221000 000 011244566654431 112
Q ss_pred CCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEE
Q 004034 379 CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASV 458 (778)
Q Consensus 379 ~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tl 458 (778)
.+.....++|+++|+|||||||+||||+++|++++..........+++.++|+++++++++|+++ .+ ++.+|+.|+++
T Consensus 256 ~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~-~~~~l~~G~t~ 333 (652)
T TIGR01217 256 LVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW-NW-LVSGLATGATL 333 (652)
T ss_pred CCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh-HH-HHHHHhcCcEE
Confidence 23345677999999999999999999999999977666666666789999999999999999864 33 55899999999
Q ss_pred EEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCc
Q 004034 459 VVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRC 538 (778)
Q Consensus 459 vl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~ 538 (778)
+++++.+.++++..+++++++++||++.++|++++.|...........++++||.+++|||++++++++++.+.++. ++
T Consensus 334 vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~-~~ 412 (652)
T TIGR01217 334 VLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKA-DV 412 (652)
T ss_pred EEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCC-Cc
Confidence 99988776678999999999999999999999998887654322345688999999999999999999999998864 46
Q ss_pred ceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChh--hhh
Q 004034 539 PISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHE--RYE 616 (778)
Q Consensus 539 ~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~--~~~ 616 (778)
.+.+.||+||+++......+ ..+..++++|.|.+|++++|+|++|+++ .|+.|||+|+||+|+++.|||++++ ++.
T Consensus 413 ~~~~~yG~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~v~ivd~~g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~ 490 (652)
T TIGR01217 413 WLASISGGTDICSCFAGANP-TLPVHIGEIQAPGLGTAVQSWDPEGKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYR 490 (652)
T ss_pred eEEeccCHHHHhccccCCCC-CCCCcCCccCCCcCCCceEEECCCCCCC-CCCccEEEEecCCCccccceeCCCccchhH
Confidence 78899999997543332211 1234568899999999999999999998 4899999999998899999999997 555
Q ss_pred hhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEE
Q 004034 617 TTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 696 (778)
Q Consensus 617 ~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 696 (778)
..|+...+|||+|||+|++|+||+|+|+||.||+||++|+||+|.|||++|.+||+|.||+|++++++..++.++|||++
T Consensus 491 ~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~ 570 (652)
T TIGR01217 491 DAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHL 570 (652)
T ss_pred HhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEE
Confidence 67777678999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcCCCCCCCCChhhHHHHHhhh
Q 004034 697 VEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 776 (778)
Q Consensus 697 ~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (778)
+++...++++.++|+++|+++|++|++|+.|+++++||+|+||||+|+.|+++++++ +.++.++++||++++++++++
T Consensus 571 ~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~--~~~~~~~~~~~~~l~~~~~~~ 648 (652)
T TIGR01217 571 APGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGT--PVDNPGAIDNPELLDLYEELA 648 (652)
T ss_pred CCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCC--CCCCcccccCHHHHHHHHHHH
Confidence 887766677788999999999999999999999999999999999999999998765 467899999999999998864
No 10
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-89 Score=811.95 Aligned_cols=612 Identities=27% Similarity=0.443 Sum_probs=517.8
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHhh--cccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEE
Q 004034 142 PQKYLEMYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVA 219 (778)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~A 219 (778)
+..|.++++++++||+.||.++++. +.|.+++.. +.+. .. ..+++||.++.+|.+++++++ .+|+++|
T Consensus 33 ~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~-~~~~-~~----~~~~~wf~~~~~n~~~~~~~~----~~~~~~A 102 (655)
T PRK03584 33 FDDYAALWRWSVEDLEAFWQSVWDFFGVIGSTPYTV-VLAG-RR----MPGARWFPGARLNYAENLLRH----RRDDRPA 102 (655)
T ss_pred hHhHHHHHHHHHhCHHHHHHHHHHhcCceecCCCcE-eecC-CC----CCCCeeCCCCEeeHHHHhhcc----CCCCCeE
Confidence 4789999999999999999999876 789888776 4321 11 123599999999999999874 4799999
Q ss_pred EEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHH
Q 004034 220 IYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQR 299 (778)
Q Consensus 220 l~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~ 299 (778)
+++.+++ +..+++||+||.++++++|+.|+++|+++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++
T Consensus 103 l~~~~~~-~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~ 181 (655)
T PRK03584 103 IIFRGED-GPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDR 181 (655)
T ss_pred EEEECCC-CceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHH
Confidence 9997543 446899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCC-CCC
Q 004034 300 IMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTK 378 (778)
Q Consensus 300 l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 378 (778)
|++++++++|+++....+.+.+.....+.++...+ +.+..++.++..... ...........|++.+... ...
T Consensus 182 l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 254 (655)
T PRK03584 182 FGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAAL----PSLEHVVVVPYLGPA---AAAAALPGALLWEDFLAPAEAAE 254 (655)
T ss_pred HHHcCCcEEEEccccccCCcccchHHHHHHHHhcC----CCccEEEEEecCCCc---ccccccCCcccHHHHhhccccCC
Confidence 99999999999998877777777777776665544 455566665532200 0011122345566555421 222
Q ss_pred CCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEE
Q 004034 379 CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASV 458 (778)
Q Consensus 379 ~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tl 458 (778)
.......+++++||+|||||||+||||+++|++++.+....+...+++.++|+++++++++|+++. .++++|+.|+++
T Consensus 255 ~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~L~~G~t~ 332 (655)
T PRK03584 255 LEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN--WLVSGLLVGATL 332 (655)
T ss_pred CCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH--HHHHHHHcCCEE
Confidence 334456789999999999999999999999999776666666778899999999999999998653 367899999999
Q ss_pred EEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCc
Q 004034 459 VVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRC 538 (778)
Q Consensus 459 vl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~ 538 (778)
+++++.+..+++..++++++++++|++.++|++++.|++.........++++||.+++|||++++++++++.+.++. ++
T Consensus 333 vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~-~~ 411 (655)
T PRK03584 333 VLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKA-DV 411 (655)
T ss_pred EEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCC-Cc
Confidence 99988777779999999999999999999999999998764332344678999999999999999999999999854 47
Q ss_pred ceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChh--hhh
Q 004034 539 PISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHE--RYE 616 (778)
Q Consensus 539 ~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~--~~~ 616 (778)
++.+.||+||+++......+ ..+..++++|.|++|++++|+|++|+++ .|+.|||+|+||+|+++.|||++++ ++.
T Consensus 412 ~~~~~yG~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~ 489 (655)
T PRK03584 412 WLASISGGTDICSCFVGGNP-LLPVYRGEIQCRGLGMAVEAWDEDGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYR 489 (655)
T ss_pred eEEeccChHhhhcccccCCC-CCCcCCCccCCCcCCceeEEECCCCCCC-CCCceEEEEccCCCCCcceeeCCCccchHH
Confidence 89999999998654332221 1245678899999999999999999999 7899999999988899999999986 566
Q ss_pred hhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEE
Q 004034 617 TTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 696 (778)
Q Consensus 617 ~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 696 (778)
..++...+|||+|||+|++|+||+++|+||.||+||++|+||+|.|||++|.+||+|.||+|++++++..++.+++||++
T Consensus 490 ~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~ 569 (655)
T PRK03584 490 DAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVL 569 (655)
T ss_pred HhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEE
Confidence 67777678899999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhccc-CcCCCCCCCCChhhHHHHHhh
Q 004034 697 VEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL-DELGDTSTLADPGVVDQLIAL 775 (778)
Q Consensus 697 ~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 775 (778)
+++...++++.++|+++|+++|++|++|..|+++++||+|+||||+|+.|++++.+.. ..+.+.++++||++++++++.
T Consensus 570 ~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (655)
T PRK03584 570 AEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALANPEALDWFADL 649 (655)
T ss_pred CCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCcccccCHHHHHHHHHH
Confidence 8876656677789999999999999999999999999999999999999999987653 223489999999999999886
Q ss_pred h
Q 004034 776 A 776 (778)
Q Consensus 776 ~ 776 (778)
+
T Consensus 650 ~ 650 (655)
T PRK03584 650 A 650 (655)
T ss_pred H
Confidence 4
No 11
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=9.7e-85 Score=774.26 Aligned_cols=583 Identities=26% Similarity=0.401 Sum_probs=477.9
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHhh--cccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEE
Q 004034 142 PQKYLEMYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVA 219 (778)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~A 219 (778)
+.+|.++++++++||+.||.++++. +.|.+++.+ +++... ...+..+||+++++|.++++|+++++ ++||++|
T Consensus 119 ~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~-v~~~~~---~~~~~~~wf~g~~ln~~~~~l~~~~~-~~pd~~A 193 (728)
T PLN03052 119 ISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRC-ILDTSD---ESNPGGQWLPGAVLNVAECCLTPKPS-KTDDSIA 193 (728)
T ss_pred hhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCce-eecCCC---CCCCCCEECCCCEeEHHHHHHHHHhc-cCCCCeE
Confidence 4789999999999999999999876 579888877 553210 11123599999999999999999876 7899999
Q ss_pred EEEEcCC--CCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHH
Q 004034 220 IYWEAND--PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLA 297 (778)
Q Consensus 220 l~~~~~~--~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~ 297 (778)
+++.++. .+..+++||+||+++++++|+.|+++|+++||+|+|++||++|++++||||+++|++++|++|+++++++.
T Consensus 194 i~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~ 273 (728)
T PLN03052 194 IIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIA 273 (728)
T ss_pred EEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHH
Confidence 9998542 12347899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCCC-
Q 004034 298 QRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP- 376 (778)
Q Consensus 298 ~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 376 (778)
+++++++|++||+++...++++.+++...+.+... ..++++....... ... ...++..|++.+....
T Consensus 274 ~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~---------~~~iv~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~ 341 (728)
T PLN03052 274 TRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA---------PKAIVLPADGKSV--RVK-LREGDMSWDDFLARANG 341 (728)
T ss_pred HHHHhcCceEEEEcCccccCCcccchHHHHHHhcC---------CcEEEEeCCCCcc--ccc-cccCCccHHHHHhcccc
Confidence 99999999999999988777777776555443211 1244443221000 000 0113455666543321
Q ss_pred ----CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHH
Q 004034 377 ----TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPM 452 (778)
Q Consensus 377 ----~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L 452 (778)
...+.....+++++||+|||||||+||||+++|++++.. .......+++.++|+++++++++|+++. +.++++|
T Consensus 342 ~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~-~~~~~~~~~l~~~d~~~~~~~l~w~~g~-~~v~~~L 419 (728)
T PLN03052 342 LRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRA-AADAWAHLDIRKGDIVCWPTNLGWMMGP-WLVYASL 419 (728)
T ss_pred ccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHH-HHHHHHhcCCCCCcEEEECCCcHHHhHH-HHHHHHH
Confidence 112222346799999999999999999999999986544 3334445789999999999999999985 6788999
Q ss_pred hcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHH
Q 004034 453 LNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNV 532 (778)
Q Consensus 453 ~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (778)
++|++++++++. +++..+++++++++||+++++|++++.|.+... ...+++++||.++++||+++++.+.|+.+.
T Consensus 420 ~~Gat~vl~~g~---p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~--~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~ 494 (728)
T PLN03052 420 LNGATLALYNGS---PLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNC--MAGLDWSSIRCFGSTGEASSVDDYLWLMSR 494 (728)
T ss_pred HhCCEEEEeCCC---CCCChHHHHHHHHCCCEEEECHHHHHHHHhcCC--cccCChhheeEEEecCCCCCHHHHHHHHHh
Confidence 999999999865 345679999999999999999999999988653 245688999999999999999999999887
Q ss_pred hCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCe--eeEEEEecCCCcccccccC
Q 004034 533 VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGEC--SGYLCIKSSWPGAFRTLYG 610 (778)
Q Consensus 533 ~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~--~GEL~v~g~~p~v~~gY~~ 610 (778)
++. .++++.||+||+++..+...+ ..+..++++|+|++|++++|+|++|++++.|+ .|||++++++++...+|++
T Consensus 495 ~~~--~~i~~~yG~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~ 571 (728)
T PLN03052 495 AGY--KPIIEYCGGTELGGGFVTGSL-LQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALFPLMFGASSTLLN 571 (728)
T ss_pred cCC--CCeEeeccChhhCcccccCCC-CCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEeCCCCCCCccccC
Confidence 762 579999999999865443222 12446788999999999999999999999985 6999999877778888988
Q ss_pred ChhhhhhhccCCC---CC--eEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHh-cCCccceEEEEEEecC
Q 004034 611 DHERYETTYFKPF---PG--YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGVEHE 684 (778)
Q Consensus 611 ~~~~~~~~~~~~~---~G--~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~-~~p~V~ea~Vv~~~~~ 684 (778)
+. ....||... +| ||+|||++++|+||+++|+||+||+||++|+||+|.|||++|. .||+|.||+||+++++
T Consensus 572 ~~--~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~ 649 (728)
T PLN03052 572 AD--HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPPP 649 (728)
T ss_pred ch--hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeeecC
Confidence 74 235565432 24 9999999999999999999999999999999999999999995 8999999999999998
Q ss_pred CCC-eEEEEEEEEc--CCCCCC-HHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 685 VKG-QGIYAFVTLV--EGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 685 ~~~-~~lva~Vv~~--~~~~~~-~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
..| +.+++||+++ ++...+ ++++++|+++|+++|+++++|+.|+++++||+|+||||+|+.|++++.+.
T Consensus 650 ~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~~ 722 (728)
T PLN03052 650 GGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQE 722 (728)
T ss_pred CCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHhh
Confidence 665 8999999997 554433 67888999999999999999999999999999999999999999988643
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.9e-78 Score=675.17 Aligned_cols=500 Identities=29% Similarity=0.469 Sum_probs=418.8
Q ss_pred CCCe-EEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCC
Q 004034 214 LGDK-VAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIG--VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG 290 (778)
Q Consensus 214 ~pd~-~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~G--v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~ 290 (778)
.+++ +++++...+ ++.+||+|+.+++.|+|..|.++| +++||+|+|++||+++++.++|||+.+|+++.|++|.
T Consensus 29 ~~~~~~~~i~~~~~---g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~ 105 (537)
T KOG1176|consen 29 YLDRNTSLVYQDSD---GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPR 105 (537)
T ss_pred cccCcceEEEecCC---CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcc
Confidence 4444 888887533 589999999999999999999876 8999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC-CCcccc-h
Q 004034 291 FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ-DGRDIW-W 368 (778)
Q Consensus 291 ~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~-~ 368 (778)
+.+.++.+.++++++++||++.... +.+.++...+ . ..++++..... ..... ...... +
T Consensus 106 ~~~~ei~~~~~~s~~kiif~d~~~~---------~~i~~~~~~~----~--~~i~~l~~~~~----~~~~~~~~~~~~~~ 166 (537)
T KOG1176|consen 106 LTASEIAKQLKDSKPKLIFVDEDFY---------DKISEATSKL----A--LKIIVLTGDEG----VISISDLVEDLDAF 166 (537)
T ss_pred cCHHHHHHHHHhcCCeEEEEcCchH---------HHHHHHHhhc----C--CceEEEecccC----ccccccccccccch
Confidence 9999999999999999999988753 2333333222 1 33443332200 00000 001111 3
Q ss_pred hhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHH
Q 004034 369 QDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVT 448 (778)
Q Consensus 369 ~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i 448 (778)
.+.+....... ....+.+|++.|+|||||||.||||+++|++++.+... ......+...|+.++++|++|..|+...+
T Consensus 167 ~~~~~~~~~~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~-~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~ 244 (537)
T KOG1176|consen 167 EDLMPEGLPDG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLS-IKIGWELTSDDVYLCTLPLFHIYGLITLL 244 (537)
T ss_pred hhccccCCCcc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHH-hhhcccCCCCceEEEechHHHHhHHHHHH
Confidence 33333322222 45667799999999999999999999999996555333 33345566689999999999999966555
Q ss_pred HHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHH
Q 004034 449 YGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRW 528 (778)
Q Consensus 449 ~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~ 528 (778)
.+.+..|+++++.. .++++.+++.|++|+||++.++|+++..|++.+. ...++++++|.+++||.++++++.++
T Consensus 245 ~~~~~~~~~ii~~~----~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~--~~~~~l~sl~~v~~gga~~~~~~~~~ 318 (537)
T KOG1176|consen 245 LSLLAGGTTIICLR----KFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPI--VKKYDLSSLRSVLSGGAPLSPATLEK 318 (537)
T ss_pred HHHHhCCceEEECC----CCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCc--cCcccCCccEEEEecCCCCCHHHHHH
Confidence 44555555555542 3599999999999999999999999999999873 45679999999999999999999999
Q ss_pred HHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccc
Q 004034 529 FFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTL 608 (778)
Q Consensus 529 ~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY 608 (778)
+.+.++ ...+.+.||+||+++..+.+..... .+++++|+++++++..|.++.|+.+++++.||||++| +.++.||
T Consensus 319 ~~~~l~--~~~v~q~YGmTE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg--~~imkGY 393 (537)
T KOG1176|consen 319 VKERLP--NVTVIQGYGMTEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRG--PQVMKGY 393 (537)
T ss_pred HHHhCC--CceEEEeeccccccCceeecCCCcc-CcccccCccccceEEEeeCCCCCCCCCCCceEEEEEC--cccchhh
Confidence 999998 4789999999999976665544332 5899999999999999999999999999999999999 9999999
Q ss_pred cCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCe
Q 004034 609 YGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQ 688 (778)
Q Consensus 609 ~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~ 688 (778)
|+||+.+.+.+.+ +|||+|||+|++|+||+|+|++|++|+||.+|++|+|.|||++|..||.|.|||||+++|+..|+
T Consensus 394 ~~NpeaT~~~~~~--~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge 471 (537)
T KOG1176|consen 394 LKNPEATKEAFDD--DGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGE 471 (537)
T ss_pred cCChHHHHhhccc--CCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCC
Confidence 9999999988765 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 689 GIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 689 ~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
.++|||+.+++...+ +++|+++|+++|+.|++|..++|+++||||+||||+|+.|++++.+.
T Consensus 472 ~p~A~VV~k~g~~lt---e~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 472 TPAAFVVLKKGSTLT---EKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred cceEEEEecCCCcCC---HHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhc
Confidence 999999999876665 78999999999999999999999999999999999999999998753
No 13
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-75 Score=682.88 Aligned_cols=536 Identities=42% Similarity=0.724 Sum_probs=451.7
Q ss_pred ccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHH
Q 004034 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (778)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~v 271 (778)
+||.++.+|+++++++++++..+|+++|+++.++. ..+++||+||.++++++|.+|+++|+++||+|+|+++|+++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~ 112 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHADGGRKDKVALRYLDAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELY 112 (570)
T ss_pred ccCCCCceeHHHHHHHHhhccCCCCceEEEEECCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH
Confidence 79999999999999999986347999999986432 3578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCC
Q 004034 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (778)
Q Consensus 272 va~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 351 (778)
+++|||+++|++++|+++.++.+++.+++++++++++|+++....... ...+ +.++.++.++...
T Consensus 113 ~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~ 177 (570)
T PRK04319 113 FALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKP-----------ADDL----PSLKHVLLVGEDV 177 (570)
T ss_pred HHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccc-----------hhcC----CCceEEEEECCCc
Confidence 999999999999999999999999999999999999999876432110 0011 3344455444321
Q ss_pred ccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcE
Q 004034 352 AMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 431 (778)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~ 431 (778)
. .......|.+.+...+...+.....++++++|+|||||||.||||+++|++++.+ .......+++.++|+
T Consensus 178 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~-~~~~~~~~~~~~~d~ 248 (570)
T PRK04319 178 E--------EGPGTLDFNALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQH-YQTGKYVLDLHEDDV 248 (570)
T ss_pred C--------CCcCccCHHHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHH-HHHHHHhcCCCCCce
Confidence 0 0112234444443333333344557899999999999999999999999995543 444556688899999
Q ss_pred EEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCce
Q 004034 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSL 511 (778)
Q Consensus 432 ~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sL 511 (778)
+++..+++|.+++.+.++.+|..|+++++.... +++..+++.|+++++|+++++|++++.|.+.........++++|
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l 325 (570)
T PRK04319 249 YWCTADPGWVTGTSYGIFAPWLNGATNVIDGGR---FSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSL 325 (570)
T ss_pred EEecCChHHhhCchHHHHHHHhcCceEEEECCC---CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccc
Confidence 999999999999888899999999999997542 58999999999999999999999999998765433344578899
Q ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCe
Q 004034 512 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGEC 591 (778)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~ 591 (778)
|.+++|||++++++.+++.+.++ .++++.||+||++.+.+..... ....++++|+|+++++++|+|+++++++.|+
T Consensus 326 r~~~~gG~~l~~~~~~~~~~~~g---~~i~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~ 401 (570)
T PRK04319 326 RHILSVGEPLNPEVVRWGMKVFG---LPIHDNWWMTETGGIMIANYPA-MDIKPGSMGKPLPGIEAAIVDDQGNELPPNR 401 (570)
T ss_pred eEEEEcccCCCHHHHHHHHHHhC---CCeEeceeecccCCEEEecCCC-CCCCCCcCcCCCCCCEEEEECCCCCCCCCCC
Confidence 99999999999999999999887 6799999999998765543322 2346789999999999999999999999999
Q ss_pred eeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCC
Q 004034 592 SGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHP 671 (778)
Q Consensus 592 ~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p 671 (778)
.|||+|++++|++++|||++++.+...+. +|||+|||++++++||+++++||.||+||++|++|+|.|||++|.+||
T Consensus 402 ~Gel~i~~~~~~~~~GY~~~~~~~~~~~~---~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~ 478 (570)
T PRK04319 402 MGNLAIKKGWPSMMRGIWNNPEKYESYFA---GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHP 478 (570)
T ss_pred ceEEEEcCCCChHHhHhcCCHHHhhhhhc---CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCC
Confidence 99999998778999999999998877653 689999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 672 QCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 672 ~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
.|.+++|++++++..++.+++||++.++...++++.++|+++++++|+.|++|+.|+++++||+|++||++|++|+++..
T Consensus 479 ~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~ 558 (570)
T PRK04319 479 AVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWEL 558 (570)
T ss_pred CeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHh
Confidence 99999999999988899999999998776555667789999999999999999999999999999999999999999875
Q ss_pred cccCcCCCCCCCCC
Q 004034 752 RQLDELGDTSTLAD 765 (778)
Q Consensus 752 ~~~~~~~~~~~~~~ 765 (778)
+. ..++.+++.|
T Consensus 559 ~~--~~~~~~~~~~ 570 (570)
T PRK04319 559 GL--PEGDLSTMED 570 (570)
T ss_pred CC--CcCccccccC
Confidence 43 2334555554
No 14
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.3e-76 Score=756.25 Aligned_cols=608 Identities=18% Similarity=0.192 Sum_probs=469.7
Q ss_pred CCCCccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCccccccc
Q 004034 102 SGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSEN 181 (778)
Q Consensus 102 ~~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (778)
...++|||++.+. +.++.+...++|++++|+++++.+++++|..+|++++++|++++.++.. +. ..+.. .+...
T Consensus 152 ~~~~~~dl~~~v~--~~~~~l~l~~~y~~~lf~~~~i~~l~~~f~~lL~~~~~~p~~~l~~l~~-~~-~~~~~--~~~~~ 225 (1389)
T TIGR03443 152 STGSTTDLTVFLT--PSSPELELSIYYNSLLFSSDRITIVADQLAQLLSAASSNPDEPIGKVSL-IT-PSQKS--LLPDP 225 (1389)
T ss_pred ccCCccceEEEEE--ecCCcEEEEEEEchhcCCHHHHHHHHHHHHHHHHHHHhCcCCceecccC-CC-HHHHh--hhhcc
Confidence 3557899999877 5556788999999999999999999999999999999999999988742 11 11100 01000
Q ss_pred ccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCC---CCcceeecHHHHHHHHHHHHHHHHHcCCCCCC
Q 004034 182 LDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGD 258 (778)
Q Consensus 182 ~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~---~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd 258 (778)
.. ...|... ..+++++|+++++ .+||++|+++.... ....+++||+||+++++++|++|++.|+++||
T Consensus 226 ---~~---~~~~~~~--~~~l~~~~~~~a~-~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~ 296 (1389)
T TIGR03443 226 ---TK---DLDWSGF--RGAIHDIFADNAE-KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGD 296 (1389)
T ss_pred ---cc---ccCcCcc--cCcHHHHHHHHHH-hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 00 0134221 2368999999999 89999999864211 12367899999999999999999999999999
Q ss_pred EEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcC
Q 004034 259 AVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSG 338 (778)
Q Consensus 259 ~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (778)
+|+|+++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+.+.... +...+...........
T Consensus 297 ~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~------~~~~~~~~~~~~~~~~ 370 (1389)
T TIGR03443 297 VVMIYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGT------LDQLVRDYIDKELELR 370 (1389)
T ss_pred EEEEEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccc------cchhhhhhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999998764311 0111111110000000
Q ss_pred CCccEEEEEccCCccccccccCCCCcccchhhccCCC---CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHH
Q 004034 339 ISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY---PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH 415 (778)
Q Consensus 339 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~ 415 (778)
..+..+ .+....... .... .....+.+... ..........+++++||+|||||||+||||+++|++++ +
T Consensus 371 ~~~~~~-~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~-~ 442 (1389)
T TIGR03443 371 TEIPAL-ALQDDGSLV--GGSL----EGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLA-Y 442 (1389)
T ss_pred cccceE-Eeccccccc--cccc----ccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHH-H
Confidence 011111 111110000 0000 00000000000 00111223568999999999999999999999999954 4
Q ss_pred HHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 416 TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 416 ~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
...++...+++.++|++++.++++|+.+ .+.+|.+|+.|+++++.+.. ...++..+++.|++++||+++++|++++.|
T Consensus 443 ~~~~~~~~~~~~~~d~~~~~~~~~~d~~-~~~i~~~L~~G~~l~~~~~~-~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l 520 (1389)
T TIGR03443 443 YFPWMAKRFGLSENDKFTMLSGIAHDPI-QRDMFTPLFLGAQLLVPTAD-DIGTPGRLAEWMAKYGATVTHLTPAMGQLL 520 (1389)
T ss_pred HHHHHHHhcCCCCCCEEEEecCceecch-HHHHHHHHhCCCEEEEcChh-hccCHHHHHHHHHHhCCeEEEeCHHHHHHH
Confidence 4555667789999999999999999986 67899999999999997643 334788999999999999999999999998
Q ss_pred HhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCC-C--------CCCCCC
Q 004034 496 MRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG-A--------WPQKPG 566 (778)
Q Consensus 496 ~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~-~--------~~~~~~ 566 (778)
..... ..+++||.+++|||++++...+++.+..+ +++++|.||+||++.+++..... . ......
T Consensus 521 ~~~~~-----~~~~~lr~~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1389)
T TIGR03443 521 SAQAT-----TPIPSLHHAFFVGDILTKRDCLRLQTLAE--NVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVM 593 (1389)
T ss_pred Hhccc-----ccCCCccEEEEecccCCHHHHHHHHHhCC--CCEEEECccCCccceeEEEEEccccccccchhhcccCcC
Confidence 75432 25789999999999999999998887765 47899999999998755432111 0 011346
Q ss_pred CcCcCcCCceEEEECCC--CceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCC----------------------
Q 004034 567 SATFPFFGVQPVIVDEK--GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP---------------------- 622 (778)
Q Consensus 567 ~~G~p~~g~~~~Ivd~~--g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~---------------------- 622 (778)
++|+|+++++++|+|++ +++++.|+.|||+|+| |++++||+|+++.+.+.|...
T Consensus 594 ~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G--~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1389)
T TIGR03443 594 PAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRA--GGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREF 671 (1389)
T ss_pred cCCCccCCCEEEEECCccCCCcCCCCCceEEEecc--cccchhcCCChhHhhhhccCCcccCcccccccccccccccccc
Confidence 79999999999999964 5789999999999999 899999999999888877431
Q ss_pred ----CCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcC
Q 004034 623 ----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE 698 (778)
Q Consensus 623 ----~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~ 698 (778)
.+|||+|||+|++++||+|+|+||.|||||++|+||+|.|||++|.+||.|.+++|++.++...++.++|||++..
T Consensus 672 ~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~ 751 (1389)
T TIGR03443 672 WLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQD 751 (1389)
T ss_pred cCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccC
Confidence 2579999999999999999999999999999999999999999999999999999999988877889999999763
Q ss_pred CCC-C----------------------CHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHH
Q 004034 699 GVP-Y----------------------SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKI 749 (778)
Q Consensus 699 ~~~-~----------------------~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~ 749 (778)
... . ..+..++|+++++++||.||+|..|+++++||+|+||||||++|++.
T Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~ 825 (1389)
T TIGR03443 752 KSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFP 825 (1389)
T ss_pred ccccccccccccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCC
Confidence 211 0 01135789999999999999999999999999999999999999754
No 15
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.7e-77 Score=812.54 Aligned_cols=575 Identities=19% Similarity=0.242 Sum_probs=473.8
Q ss_pred CCCCccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCcccc-cc
Q 004034 102 SGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVC-SE 180 (778)
Q Consensus 102 ~~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 180 (778)
...++|||++.+.. ++.+...++|++++|+++++++++++|..+|++++++|++.++++.. +... .... ++ .+
T Consensus 3011 ~~~~~~~l~l~~~~---~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~l~~-l~~~-~~~~-~~~~~ 3084 (3956)
T PRK12467 3011 REQTNYPLTLAVGL---GDTLELEFSYDRQHFDAAAIERLAESFDRLLQAMLNNPAARLGELPT-LAAH-ERRQ-VLHAW 3084 (3956)
T ss_pred cccccCceEEEecc---CcceeEEEEechhhCCHHHHHHHHHHHHHHHHHHHhCcCCchhhccC-CCHH-HHHH-HHHhh
Confidence 34579999988763 34578899999999999999999999999999999999999988742 1111 1111 10 01
Q ss_pred cccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 004034 181 NLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAV 260 (778)
Q Consensus 181 ~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V 260 (778)
+.... .+ ....+++++|+++++ ++||++|+++. ++++||+||+++++++|+.|+++|+++|++|
T Consensus 3085 ~~~~~------~~---~~~~~~~~l~~~~a~-~~p~~~Av~~~------~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V 3148 (3956)
T PRK12467 3085 NATAA------AY---PSERLVHQLIEAQVA-RTPEAPALVFG------DQQLSYAELNRRANRLAHRLIAIGVGPDVLV 3148 (3956)
T ss_pred ccCCC------CC---CccccHHHHHHHHHH-hCCCcceEeeC------CcccCHHHHHHHHHHHHHHHHHcCCCCCCeE
Confidence 11000 00 111368999999999 89999999987 6889999999999999999999999999999
Q ss_pred EEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCC
Q 004034 261 IIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGIS 340 (778)
Q Consensus 261 ai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (778)
+|+++|++++++++|||+++|++|+|++|.+|.+++.+++++++++++|+++..... +.. ..
T Consensus 3149 ~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~-------------~~~-----~~ 3210 (3956)
T PRK12467 3149 GVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQ-------------LPA-----PA 3210 (3956)
T ss_pred EEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhh-------------ccc-----cc
Confidence 999999999999999999999999999999999999999999999999998653210 000 00
Q ss_pred ccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHH
Q 004034 341 VDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF 420 (778)
Q Consensus 341 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~ 420 (778)
...++.++... + .......+.....++++|||+|||||||+||||+++|+++ .+...+.
T Consensus 3211 ~~~~~~~~~~~----------------~----~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l-~~~~~~~ 3269 (3956)
T PRK12467 3211 GDTALTLDRLD----------------L----NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGAL-ANHLCWI 3269 (3956)
T ss_pred CCceeeecchh----------------h----cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHH-HHHHHHH
Confidence 11122222111 0 0011122233467899999999999999999999999995 5555666
Q ss_pred HHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCC
Q 004034 421 KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN 500 (778)
Q Consensus 421 ~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~ 500 (778)
...+++.++|++++++|++|+.+ ++.++.+|+.|+++++.++ ...++..+++.|++++||++.++|++++.|++...
T Consensus 3270 ~~~~~~~~~d~~l~~~~~~fd~~-~~~~~~~L~~G~~l~i~~~--~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~ 3346 (3956)
T PRK12467 3270 AEAYELDANDRVLLFMSFSFDGA-QERFLWTLICGGCLVVRDN--DLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG 3346 (3956)
T ss_pred HHhcCCCcCCEEEEecCccHhHH-HHHHHHHHhCCCEEEECCc--ccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc
Confidence 77889999999999999999987 7889999999999999872 33589999999999999999999999999987532
Q ss_pred cccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC---CCCCCCCcCcCcCCceE
Q 004034 501 EYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---WPQKPGSATFPFFGVQP 577 (778)
Q Consensus 501 ~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~---~~~~~~~~G~p~~g~~~ 577 (778)
..++++||.+++|||+++++++++|.+.++ ++.++|.||+||+++.++...... ......++|+|++|+++
T Consensus 3347 ----~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 3420 (3956)
T PRK12467 3347 ----GADCASLDIYVFGGEAVPPAAFEQVKRKLK--PRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSI 3420 (3956)
T ss_pred ----ccCCCCceEEEEecCCCCHHHHHHHHHhCC--CCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEE
Confidence 236789999999999999999999988876 478999999999987655332111 11234789999999999
Q ss_pred EEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCC-----CCCeEEcCcEEEEecCCeEEEEeecCCEEE
Q 004034 578 VIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 652 (778)
Q Consensus 578 ~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~-----~~G~yrTGDl~~~~~dG~l~~~GR~dd~Ik 652 (778)
+|+|++++++|.|+.|||+|+| |++++||+|+++.+.+.|..+ ..+||||||+|++++||+|+|+||+|||||
T Consensus 3421 ~v~d~~~~~vp~G~~GEL~i~G--~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~ik 3498 (3956)
T PRK12467 3421 YVLDGQLNPVPVGVAGELYIGG--VGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVK 3498 (3956)
T ss_pred EEECCCCCCCCCCCCceEEEcc--hhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEe
Confidence 9999999999999999999999 899999999998888877542 234999999999999999999999999999
Q ss_pred eCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCC
Q 004034 653 VSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPG 732 (778)
Q Consensus 653 i~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~ 732 (778)
++|+||+|+|||++|.+||+|.+|+|++..+ ..++.++|||+....... ..++|+++++++||.||+|..|+++++
T Consensus 3499 i~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~-~~~~~lva~v~~~~~~~~---~~~~l~~~l~~~Lp~y~vP~~~~~l~~ 3574 (3956)
T PRK12467 3499 IRGFRIELGEIEARLLQHPSVREAVVLARDG-AGGKQLVAYVVPADPQGD---WRETLRDHLAASLPDYMVPAQLLVLAA 3574 (3956)
T ss_pred eceEeecHHHHHHHHhhCcccceEEEEEecC-CCCcEEEEEEeCCCCCcc---cHHHHHHHHhccCChhhCCCeeeeecc
Confidence 9999999999999999999999999998754 467899999998764322 267899999999999999999999999
Q ss_pred CCCCCCCcccHHHHHHHHhc
Q 004034 733 LPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 733 lP~T~sGKi~R~~L~~~~~~ 752 (778)
||+|+||||||++|++....
T Consensus 3575 lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3575 MPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred CCCCCCCccchhhcCCCCcc
Confidence 99999999999999987643
No 16
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3.2e-76 Score=614.35 Aligned_cols=523 Identities=23% Similarity=0.298 Sum_probs=447.5
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++++-.++ ..||+.|+++..+ +.++||+|+.+.+.++|..|.++|+++||||+|..||+.+|+..+|||+++
T Consensus 51 Tigq~l~~~t~-~v~dkea~Vf~~e----g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 51 TIGQLLETTTE-RVPDKEAAVFDHE----GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred cHHHHHHHHhh-ccCcceEEEEeec----cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 67888888888 8999999999843 677999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhh---------cCCCccEEEEEccCC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK---------SGISVDVCLTYENQS 351 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~vi~~~~~~ 351 (778)
|.+.+++||.|+.+++++.|+..+++++|+...+.. -.+.+.+.++..+... .-+.+++++..++..
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~----~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~ 201 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKT----QNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH 201 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchhhh----chHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC
Confidence 999999999999999999999999999998876532 2233444444443321 124556666555332
Q ss_pred ccccccccCCCCcccchhhccCCCCC------CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC
Q 004034 352 AMTRENTKWQDGRDIWWQDVVPKYPT------KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (778)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (778)
. ..+...++|.+..... ..-..+..|+|++.|.|||||||.|||+.+||-|++.+ .......++
T Consensus 202 ~---------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nn-a~~vg~r~g 271 (596)
T KOG1177|consen 202 P---------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNN-ARAVGARAG 271 (596)
T ss_pred c---------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhh-HHHHHHHhC
Confidence 1 1123334444433221 11124567899999999999999999999999996554 445566789
Q ss_pred CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccccc
Q 004034 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (778)
Q Consensus 426 ~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~ 505 (778)
+...+++++..|++|..|.+..++.+|..|+|+|++.+. +++...+++|.++++|.++++|+++..|++.+. ..+
T Consensus 272 ~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~---f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~--~~~ 346 (596)
T KOG1177|consen 272 YNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPS---FDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQ--KQQ 346 (596)
T ss_pred cCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCC---CChHHHHHHHHhhceEEEecChHHHHHHhcchh--hcc
Confidence 999889999999999999999999999999999998654 699999999999999999999999999998765 567
Q ss_pred CCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCC-CCCCCCcCcCcCCceEEEECCCC
Q 004034 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAW-PQKPGSATFPFFGVQPVIVDEKG 584 (778)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~-~~~~~~~G~p~~g~~~~Ivd~~g 584 (778)
.+++++|.++.||.++++++.+.+.+...- ..+...||+||++...+.+..++. ..+..++|+.+++.+..|+|.+|
T Consensus 347 ~~~s~lr~~vigGa~~s~eLlk~iv~~~~m--~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g 424 (596)
T KOG1177|consen 347 VDLSSLRKGVIGGAPVSPELLKLIVNQMNM--KDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDG 424 (596)
T ss_pred CchhhhhhheeCCCCCCHHHHHHHHHhhCc--eeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCC
Confidence 899999999999999999999999886542 358899999999988777766552 23457899999999999999999
Q ss_pred ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHH
Q 004034 585 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVE 664 (778)
Q Consensus 585 ~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE 664 (778)
.++|-|+.|||+++| +..|.|||++++.+.++.-. +.||+|||+|.+|++|+++++||.+|+|+.+|.+|+|.|||
T Consensus 425 ~~v~~~~~Gel~iRG--Y~tMl~Ywg~~~kT~eti~~--drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE 500 (596)
T KOG1177|consen 425 SEVPLGTKGELLIRG--YSTMLGYWGEEEKTKETIGN--DRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELE 500 (596)
T ss_pred CccccCCCceEEEEe--chhheeecCCcccchhhccc--ccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHH
Confidence 999999999999999 89999999999888876543 67999999999999999999999999999999999999999
Q ss_pred HHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHH
Q 004034 665 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 744 (778)
Q Consensus 665 ~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~ 744 (778)
+.|.+||.|.++.||+++|+.-|+.++|+|.++.+.... -..++|+.+++.+|..|.+|+.|+++++||+|.+|||.|-
T Consensus 501 ~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~-~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKF 579 (596)
T KOG1177|consen 501 DFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGK-TTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKF 579 (596)
T ss_pred HHHhhCCCeeeEEEEccCCCcccceEEEEEEeecccccc-ccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhH
Confidence 999999999999999999999999999999998776531 2378999999999999999999999999999999999999
Q ss_pred HHHHHHhccc
Q 004034 745 ILRKIASRQL 754 (778)
Q Consensus 745 ~L~~~~~~~~ 754 (778)
++++++.++.
T Consensus 580 eir~~~k~~l 589 (596)
T KOG1177|consen 580 EIREMSKGHL 589 (596)
T ss_pred HHHHHHHhhc
Confidence 9999998653
No 17
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-76 Score=807.66 Aligned_cols=585 Identities=19% Similarity=0.255 Sum_probs=477.5
Q ss_pred CCCCCCccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCccccc
Q 004034 100 FPSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCS 179 (778)
Q Consensus 100 ~~~~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 179 (778)
...+.++|||++.+. +..+++...++|++++|+++++.+++++|..+|++++++|++.++++.. +. ..+... ++.
T Consensus 1487 ~~~~~~~~dL~l~v~--~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~-~~-~~~~~~-~~~ 1561 (3956)
T PRK12467 1487 WESQTAQFDLTLDTY--ESSEGLQASLTYATDLFEASTIERLAGHWLNLLQGLVADPERRLGELDL-LD-EAERRQ-ILE 1561 (3956)
T ss_pred cCCcccccceEEEEE--ecCCeEEEEEEEeCCcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccc-cc-hHHhhh-hHH
Confidence 345678999999987 4445688899999999999999999999999999999999999888742 11 111111 110
Q ss_pred -ccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCC
Q 004034 180 -ENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGD 258 (778)
Q Consensus 180 -~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd 258 (778)
++... .+++. ..+++++|+++++ ++||++|+++. ++++||+||+++++++|+.|+++|+++|+
T Consensus 1562 ~~~~~~-------~~~~~--~~~~~~~~~~~a~-~~p~~~Av~~~------~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~ 1625 (3956)
T PRK12467 1562 GWNATH-------TGYPL--ARLVHQLIEDQAA-ATPEAVALVFG------EQELTYGELNRRANRLAHRLIALGVGPEV 1625 (3956)
T ss_pred hhcCCc-------cCCCc--cccHHHHHHHHHH-hCCCCeEEEeC------CcEEeHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 11110 11111 1268999999999 89999999986 68899999999999999999999999999
Q ss_pred EEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcC
Q 004034 259 AVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSG 338 (778)
Q Consensus 259 ~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (778)
+|+|+++|++++++++|||+|+|++|+|+||.+|.+++.+++++++++++|+++..... +...
T Consensus 1626 ~V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~-------------~~~~---- 1688 (3956)
T PRK12467 1626 LVGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQAR-------------LPLP---- 1688 (3956)
T ss_pred EEEEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhh-------------Cccc----
Confidence 99999999999999999999999999999999999999999999999999997653210 0000
Q ss_pred CCccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH
Q 004034 339 ISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT 418 (778)
Q Consensus 339 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~ 418 (778)
... .++.++.... + +.......+.....+++++||+|||||||+||||+++|+++ .+...
T Consensus 1689 ~~~-~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l-~~~~~ 1748 (3956)
T PRK12467 1689 DGL-RSLVLDQEDD---------------W---LEGYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGAL-VNRLC 1748 (3956)
T ss_pred cCC-cEEEeccccc---------------h---hccCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHH-HHHHH
Confidence 011 1222221110 0 01111122233456899999999999999999999999995 45555
Q ss_pred HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhc
Q 004034 419 TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 498 (778)
Q Consensus 419 ~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~ 498 (778)
+....+++.++|++++++|++|+.+ ++++|.+|++|+++++.+... ..++..+++.|++++||++.++|++++.|.+.
T Consensus 1749 ~~~~~~~~~~~d~~l~~~~~~fd~~-~~~~~~~L~~G~~lvi~~~~~-~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~ 1826 (3956)
T PRK12467 1749 ATQEAYQLSAADVVLQFTSFAFDVS-VWELFWPLINGARLVIAPPGA-HRDPEQLIQLIERQQVTTLHFVPSMLQQLLQM 1826 (3956)
T ss_pred HHHHhcCCCcccEEEEecCccHHHH-HHHHHHHHhCCCEEEEcChhh-cCCHHHHHHHHHHcCCeEEECCHHHHHHHHhh
Confidence 6677889999999999999999997 678999999999999987543 34899999999999999999999999999875
Q ss_pred CCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCC---CCCCCCCCcCcCcCCc
Q 004034 499 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---AWPQKPGSATFPFFGV 575 (778)
Q Consensus 499 ~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~---~~~~~~~~~G~p~~g~ 575 (778)
.. ...++++||.+++|||++++++++.|.+.++ ++.++|.||+||+++.++..... .......++|+|++|+
T Consensus 1827 ~~---~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~ 1901 (3956)
T PRK12467 1827 DE---QVEHPLSLRRVVCGGEALEVEALRPWLERLP--DTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANL 1901 (3956)
T ss_pred cc---ccccCCCceEEEEccccCCHHHHHHHHHhCC--CCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCC
Confidence 32 2235789999999999999999999988876 36799999999998765533211 1112357899999999
Q ss_pred eEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCC-----CCCeEEcCcEEEEecCCeEEEEeecCCE
Q 004034 576 QPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDV 650 (778)
Q Consensus 576 ~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~-----~~G~yrTGDl~~~~~dG~l~~~GR~dd~ 650 (778)
+++|+|++++++|.|+.|||+|+| +++++||+|+++.+.+.|... ..+||||||+|++++||.|+|+||+|||
T Consensus 1902 ~~~vld~~~~~vp~G~~GEl~i~G--~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~q 1979 (3956)
T PRK12467 1902 STYILDASLNPVPIGVAGELYLGG--VGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQ 1979 (3956)
T ss_pred EEEEECCCCCCCCCCCceEEEecc--ccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCce
Confidence 999999999999999999999999 899999999999888877532 2349999999999999999999999999
Q ss_pred EEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCC-----HHHHHHHHHHHHhhcCCCcccc
Q 004034 651 INVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS-----EELRKSLVLAVRKQIGAFAAPD 725 (778)
Q Consensus 651 Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~-----~~l~~~l~~~l~~~Lp~~~~P~ 725 (778)
||++|+||+|+|||++|.+||+|.+|+|++.+ ...++.++|||+..++.... ....++|+++++++||.||+|.
T Consensus 1980 Vki~G~rIel~eIE~~l~~~p~V~~a~vv~~~-~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~ 2058 (3956)
T PRK12467 1980 VKIRGFRIELGEIEARLREQGGVREAVVIAQD-GANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPA 2058 (3956)
T ss_pred EEeCeEEechHHHHHHHHhCCCcceEEEEEec-CCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCch
Confidence 99999999999999999999999999999886 44678899999986543211 1235789999999999999999
Q ss_pred EEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 726 KIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 726 ~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
.|+++++||+|+||||||++|++....
T Consensus 2059 ~~~~l~~lP~t~~GKidr~~L~~~~~~ 2085 (3956)
T PRK12467 2059 HLVFLARMPLTPNGKLDRKALPAPDAS 2085 (3956)
T ss_pred hhhhhhcCCCCCCCCcchhhCCCCccc
Confidence 999999999999999999999876543
No 18
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=6.8e-75 Score=739.65 Aligned_cols=572 Identities=20% Similarity=0.269 Sum_probs=461.4
Q ss_pred ccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCccccccccccc
Q 004034 106 KISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVR 185 (778)
Q Consensus 106 kfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (778)
.+||.+.+...+ ++.+...++|++++|+++++.+++++|..+|++++++|+.+++++.. +...+ ... +...+....
T Consensus 378 ~~dl~l~~~~~~-~~~l~~~~~y~~~~f~~~~i~~l~~~~~~ll~~~~~~p~~~i~~~~~-~~~~~-~~~-~~~~~~~~~ 453 (1296)
T PRK10252 378 VNDLELALFPDE-HGGLSIEILANPQRYDEATLIAHAERLKALIAQFAADPALLCGDVDI-LLPGE-YAQ-LAQVNATAV 453 (1296)
T ss_pred cCCeEEEEEECC-CCcEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHhCCCCChhhcCC-CCHHH-HHH-HHHhcCCCC
Confidence 468877765322 35678899999999999999999999999999999999999988732 11110 000 000000000
Q ss_pred CCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeC
Q 004034 186 KGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLP 265 (778)
Q Consensus 186 ~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~ 265 (778)
.+ . ..+++++|+++++ .+||++|+++. .+++||+||.++++++|+.|++.|+++||+|+|+++
T Consensus 454 ------~~---~-~~~l~~~~~~~~~-~~p~~~Al~~~------~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~ 516 (1296)
T PRK10252 454 ------EI---P-ETTLSALVAQQAA-KTPDAPALADA------RYQFSYREMREQVVALANLLRERGVKPGDSVAVALP 516 (1296)
T ss_pred ------CC---C-cCCHHHHHHHHHH-hCCCCeEEEcC------CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeC
Confidence 11 1 1257899999998 89999999986 678999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEE
Q 004034 266 MLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCL 345 (778)
Q Consensus 266 ~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 345 (778)
|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++...... ... ..+. ++
T Consensus 517 ~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~-------------~~~----~~~~-~~ 578 (1296)
T PRK10252 517 RSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRF-------------ADV----PDLT-SL 578 (1296)
T ss_pred CCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhc-------------ccC----CCce-ee
Confidence 99999999999999999999999999999999999999999999986532110 000 0010 11
Q ss_pred EEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC
Q 004034 346 TYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (778)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (778)
.++.. ... ....+.....+++++||+|||||||+||||+++|+++ .+...+....++
T Consensus 579 ~~~~~---------------------~~~-~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l-~~~~~~~~~~~~ 635 (1296)
T PRK10252 579 CYNAP---------------------LAP-QGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAI-VNRLLWMQNHYP 635 (1296)
T ss_pred ecccc---------------------ccc-ccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHH-HHHHHHHHHhcC
Confidence 11100 000 0011112236789999999999999999999999995 555666777899
Q ss_pred CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccccc
Q 004034 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (778)
Q Consensus 426 ~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~ 505 (778)
+.++|++++.+|++|+.+ ++.+|.+|++|+++++.+... ..++..+++.|++++||++.++|++++.+++........
T Consensus 636 ~~~~d~~l~~~~~~fd~~-~~~~~~~l~~G~~l~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~ 713 (1296)
T PRK10252 636 LTADDVVLQKTPCSFDVS-VWEFFWPFIAGAKLVMAEPEA-HRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGAR 713 (1296)
T ss_pred CCCCCEEEEeCCcchhhh-HHHHHHHHhCCCEEEECChhc-cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccccc
Confidence 999999999999999987 678999999999999976533 358999999999999999999999999988764321222
Q ss_pred CCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC-----CCCCCCCcCcCcCCceEEEE
Q 004034 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-----WPQKPGSATFPFFGVQPVIV 580 (778)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~-----~~~~~~~~G~p~~g~~~~Iv 580 (778)
..+++||.+++|||++++++++.|.+.++ ++++|.||+||++..++...... ....+.++|+|++|++++|+
T Consensus 714 ~~~~~lr~i~~gGe~l~~~~~~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~ 790 (1296)
T PRK10252 714 QSCASLRQVFCSGEALPADLCREWQQLTG---APLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRIL 790 (1296)
T ss_pred ccCCCccEEEEecCCCCHHHHHHHHhcCC---CEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEE
Confidence 34689999999999999999999988765 78999999999987554322111 12345789999999999999
Q ss_pred CCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCC----CCCeEEcCcEEEEecCCeEEEEeecCCEEEeCce
Q 004034 581 DEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGH 656 (778)
Q Consensus 581 d~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~----~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~ 656 (778)
|+++++++.|+.|||+|+| +++++||+++++.+.+.|... ..+||+|||+|++++||+++|+||.|||||++|+
T Consensus 791 d~~~~~~~~g~~Gel~i~g--~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ 868 (1296)
T PRK10252 791 DARMRPVPPGVAGDLYLTG--IQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQ 868 (1296)
T ss_pred CCCCCCCCCCCceEEEecc--cccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeE
Confidence 9999999999999999999 899999999998877776532 3459999999999999999999999999999999
Q ss_pred eeCHHHHHHHHhcCCccceEEEEEEe----c--CCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEEC
Q 004034 657 RIGTAEVESALVSHPQCAEAAVVGVE----H--EVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWA 730 (778)
Q Consensus 657 rI~~~eIE~~L~~~p~V~ea~Vv~~~----~--~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v 730 (778)
||+|.|||++|.+||+|.+|+|+++. + ......+++||+...+...+ .++|+++++++||.||+|..++.+
T Consensus 869 ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~---~~~l~~~l~~~Lp~~~~P~~~~~~ 945 (1296)
T PRK10252 869 RIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLD---TSALQAQLRERLPPHMVPVVLLQL 945 (1296)
T ss_pred EecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCC---HHHHHHHHHhhCchhcCCcEEEEe
Confidence 99999999999999999999887653 1 11224799999987654333 578999999999999999999999
Q ss_pred CCCCCCCCCcccHHHHHHH
Q 004034 731 PGLPKTRSGKIMRRILRKI 749 (778)
Q Consensus 731 ~~lP~T~sGKi~R~~L~~~ 749 (778)
++||+|+||||||++|++.
T Consensus 946 ~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 946 DQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred cCCCCCCCcChhHHhcCCC
Confidence 9999999999999999864
No 19
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.1e-75 Score=802.36 Aligned_cols=582 Identities=19% Similarity=0.224 Sum_probs=473.2
Q ss_pred CCCccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCcccc-ccc
Q 004034 103 GAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVC-SEN 181 (778)
Q Consensus 103 ~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 181 (778)
..++|||++.+.++ +.+...+.|++++|++.++++++++|..+|++++++|++.++++.. +. ..+... +. .++
T Consensus 3637 ~~~~~~l~~~~~~~---~~l~~~l~y~~~~~~~~~~~~l~~~f~~~L~~l~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~ 3710 (4334)
T PRK05691 3637 THTNFPLTAVCYPG---DDLGLHLSYDQRYFDAPTVERLLGEFKRLLLALVQGFHGDLSELPL-LG-EQERDF-LLDGCN 3710 (4334)
T ss_pred cccCCCeEEEEecC---CceEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhCcCCChhhcCC-CC-HHHHHH-HHHhhC
Confidence 45789998876533 3577899999999999999999999999999999999999988842 11 111110 00 001
Q ss_pred ccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 004034 182 LDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVI 261 (778)
Q Consensus 182 ~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Va 261 (778)
.... .+ ....+++++|+++++ ++||++|+++. +.++||+||+++++++|+.|+++||++|++|+
T Consensus 3711 ~~~~------~~---~~~~~~~~~~~~~~~-~~p~~~Av~~~------~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~ 3774 (4334)
T PRK05691 3711 RSER------DY---PLEQSYVRLFEAQVA-AHPQRIAASCL------DQQWSYAELNRAANRLGHALRAAGVGVDQPVA 3774 (4334)
T ss_pred CccC------CC---ccccCHHHHHHHHHH-hCCCceEEEcC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 0000 00 111278999999999 99999999987 67899999999999999999999999999999
Q ss_pred EEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCc
Q 004034 262 IYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISV 341 (778)
Q Consensus 262 i~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (778)
|+++++++++++||||+|+|++||||||.+|.+|+.+++++++++++|+++..... .......+.. ...
T Consensus 3775 v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~---------~~~~~~~~~~--~~~ 3843 (4334)
T PRK05691 3775 LLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQ---------ARALLDELGC--ANR 3843 (4334)
T ss_pred EEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccch---------hhhhhccccc--ccc
Confidence 99999999999999999999999999999999999999999999999998765321 0011111100 001
Q ss_pred cEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHH
Q 004034 342 DVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK 421 (778)
Q Consensus 342 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~ 421 (778)
..+++.+... ....+...+.....++++|||+|||||||+||||+++|+++ .+...+..
T Consensus 3844 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~-~~~~~~~~ 3902 (4334)
T PRK05691 3844 PRLLVWEEVQ--------------------AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGM-LNNQLSKV 3902 (4334)
T ss_pred cceeeecccc--------------------cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHH-HHHHHHHH
Confidence 1122211110 00001112233457899999999999999999999999995 45555566
Q ss_pred HhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc
Q 004034 422 YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 501 (778)
Q Consensus 422 ~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~ 501 (778)
..++++++|+++++++++|+.+ +++++.+|+.|+++++++.... .++..+++.+++++||++.++|++++.|+....
T Consensus 3903 ~~~~~~~~~~~~~~~s~~fd~s-~~~~~~~l~~G~~l~i~~~~~~-~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~- 3979 (4334)
T PRK05691 3903 PYLALSEADVIAQTASQSFDIS-VWQFLAAPLFGARVEIVPNAIA-HDPQGLLAHVQAQGITVLESVPSLIQGMLAEDR- 3979 (4334)
T ss_pred HhcCCCccceEEEecCCchhHH-HHHHHHHHhCCCEEEEcCcccc-CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhcc-
Confidence 6789999999999999999997 7899999999999999876443 489999999999999999999999999886532
Q ss_pred ccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC--CCCCCCCcCcCcCCceEEE
Q 004034 502 YVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--WPQKPGSATFPFFGVQPVI 579 (778)
Q Consensus 502 ~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~--~~~~~~~~G~p~~g~~~~I 579 (778)
..+++||.+++|||++++++.+.|.+.++ ++.++|.||+||++..++...... ......++|+|++|++++|
T Consensus 3980 ----~~~~~lr~~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v 4053 (4334)
T PRK05691 3980 ----QALDGLRWMLPTGEAMPPELARQWLQRYP--QIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYL 4053 (4334)
T ss_pred ----ccCCCceEEEecCCcCCHHHHHHHHHhCC--CCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEE
Confidence 25689999999999999999999988765 578999999999997655332111 1223457999999999999
Q ss_pred ECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCC-----CCCeEEcCcEEEEecCCeEEEEeecCCEEEeC
Q 004034 580 VDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS 654 (778)
Q Consensus 580 vd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~-----~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~ 654 (778)
+|+.++++|.|+.|||+|+| |++++||+|+++.+.+.|..+ .++||||||+|++++||.|+|+||+|+|||++
T Consensus 4054 ~d~~~~~~p~g~~GEL~i~G--~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~ 4131 (4334)
T PRK05691 4054 LDEALELVPLGAVGELCVAG--TGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIR 4131 (4334)
T ss_pred ECCCCCCCCCCCceEEEEec--ccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEec
Confidence 99999999999999999999 999999999999988887642 24699999999999999999999999999999
Q ss_pred ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCC
Q 004034 655 GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLP 734 (778)
Q Consensus 655 G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP 734 (778)
|+||+++|||++|.+||+|.+|+|+... ...++.++|||+............++|+.+|++.||+||+|..|+++++||
T Consensus 4132 G~riel~eIE~~l~~~~~v~~a~v~~~~-~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP 4210 (4334)
T PRK05691 4132 GYRIELGEIEARLHEQAEVREAAVAVQE-GVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLP 4210 (4334)
T ss_pred eEEecHHHHHHHHHhCCCccEEEEEEec-CCCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCC
Confidence 9999999999999999999999887554 446788999999876544334456889999999999999999999999999
Q ss_pred CCCCCcccHHHHHHHH
Q 004034 735 KTRSGKIMRRILRKIA 750 (778)
Q Consensus 735 ~T~sGKi~R~~L~~~~ 750 (778)
+|+||||||++|+++.
T Consensus 4211 ~t~~GKidr~~L~~~~ 4226 (4334)
T PRK05691 4211 LNANGKLDRKALPALD 4226 (4334)
T ss_pred CCCCCcccHhhcCCCc
Confidence 9999999999998763
No 20
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=9.6e-75 Score=801.10 Aligned_cols=577 Identities=20% Similarity=0.263 Sum_probs=475.6
Q ss_pred CCCCCCccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCcccc-
Q 004034 100 FPSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVC- 178 (778)
Q Consensus 100 ~~~~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~- 178 (778)
.....++|||++.+. +..+.+...++|++++|+++++.++.++|..+|+.++++|++.+.++.. +. ..+... +.
T Consensus 424 ~~~~~~~~dL~l~v~--~~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~~i~~~p~~~i~~l~~-~~-~~~~~~-~~~ 498 (5163)
T PRK12316 424 WKSRTTQFDLTLDTY--EKGGRLHAALTYATDLFEARTVERMARHWQNLLRGMVENPQARVDELPM-LD-AEERGQ-LVE 498 (5163)
T ss_pred cCCCccceeEEEEEE--EcCCcEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhccccccccCCC-CC-HHHHHH-HHH
Confidence 345678999999877 5557788899999999999999999999999999999999999988742 11 111111 00
Q ss_pred cccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCC
Q 004034 179 SENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGD 258 (778)
Q Consensus 179 ~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd 258 (778)
.++.... .+ ....+++++|+++++ ++||++|+++. ++++||+||.++++++|+.|++.|+++|+
T Consensus 499 ~~~~~~~------~~---~~~~~~~~~~~~~a~-~~p~~~A~~~~------~~~~TY~eL~~~~~~lA~~L~~~gv~~g~ 562 (5163)
T PRK12316 499 GWNATAA------EY---PLQRGVHRLFEEQVE-RTPEAPALAFG------EETLDYAELNRRANRLAHALIERGVGPDV 562 (5163)
T ss_pred HhcCccc------cC---CCCCCHHHHHHHHHH-HCCCCeEEEeC------CceEcHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 0010000 00 011368999999999 89999999986 68999999999999999999999999999
Q ss_pred EEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcC
Q 004034 259 AVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSG 338 (778)
Q Consensus 259 ~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (778)
+|+|+++|++++++++|||+++|++++|++|.+|.+++.+++++++++++|++...... +..
T Consensus 563 ~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~-------------~~~----- 624 (5163)
T PRK12316 563 LVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRK-------------LPL----- 624 (5163)
T ss_pred EEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhh-------------CCc-----
Confidence 99999999999999999999999999999999999999999999999999998653210 000
Q ss_pred CCccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH
Q 004034 339 ISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT 418 (778)
Q Consensus 339 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~ 418 (778)
.....++.++.... + +.......+.....+++++||+|||||||+||||+++|+++ .+...
T Consensus 625 ~~~~~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l-~~~~~ 685 (5163)
T PRK12316 625 AAGVQVLDLDRPAA---------------W---LEGYSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRAL-SNRLC 685 (5163)
T ss_pred ccCceEEEecCcch---------------h---hccCCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHH-HHHHH
Confidence 00111232222110 0 01111122233456899999999999999999999999995 45556
Q ss_pred HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhc
Q 004034 419 TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 498 (778)
Q Consensus 419 ~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~ 498 (778)
+....+++.++|++++++|++|+.+ ++.++.+|++|+++++++.... .++..+++.|++++||++.++|++++.|++.
T Consensus 686 ~~~~~~~~~~~d~~l~~~p~~fd~~-~~~~~~~L~~G~~l~i~~~~~~-~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~ 763 (5163)
T PRK12316 686 WMQQAYGLGVGDTVLQKTPFSFDVS-VWEFFWPLMSGARLVVAAPGDH-RDPAKLVELINREGVDTLHFVPSMLQAFLQD 763 (5163)
T ss_pred HHHHhcCCCCCCEEEeeCCeehHHH-HHHHHHHHhCCCEEEECCcccc-CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhc
Confidence 6677899999999999999999998 6789999999999999865433 5899999999999999999999999999875
Q ss_pred CCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEE
Q 004034 499 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 578 (778)
Q Consensus 499 ~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~ 578 (778)
.. ..++++||.+++|||++++++++++.+.++ +++++|.||+||++..++..........+.++|+|++|++++
T Consensus 764 ~~----~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 837 (5163)
T PRK12316 764 ED----VASCTSLRRIVCSGEALPADAQEQVFAKLP--QAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACY 837 (5163)
T ss_pred cc----cccCCCccEEEEeeccCCHHHHHHHHHhCC--CCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEE
Confidence 32 236789999999999999999999988775 478999999999986544332222223567899999999999
Q ss_pred EECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC----CCCCeEEcCcEEEEecCCeEEEEeecCCEEEeC
Q 004034 579 IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS 654 (778)
Q Consensus 579 Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~----~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~ 654 (778)
|+|++++++|.|+.|||+|+| |++++||+++++.+.+.|.. ..++||+|||+|++++||.|+|+||+|||||++
T Consensus 838 i~d~~~~~~p~G~~GEl~i~G--~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~ 915 (5163)
T PRK12316 838 ILDANLEPVPVGVLGELYLAG--RGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLR 915 (5163)
T ss_pred EECCCCCCCCCCCceEEEecc--cccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEc
Confidence 999999999999999999999 89999999999988887753 234699999999999999999999999999999
Q ss_pred ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCC
Q 004034 655 GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLP 734 (778)
Q Consensus 655 G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP 734 (778)
|+||+|.|||++|.+||+|.+|+|++.+ ++.++|||++.++.... .++|+++++++||+||+|+.|+++++||
T Consensus 916 G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~~~~---~~~l~~~l~~~Lp~y~vP~~i~~v~~lP 988 (5163)
T PRK12316 916 GLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESEGGDW---REALKAHLAASLPEYMVPAQWLALERLP 988 (5163)
T ss_pred eEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCCCCC---HHHHHHHHHhhCCCccCCCeEEEHhhCC
Confidence 9999999999999999999999999875 67899999987654332 5789999999999999999999999999
Q ss_pred CCCCCcccHHHHHHHHh
Q 004034 735 KTRSGKIMRRILRKIAS 751 (778)
Q Consensus 735 ~T~sGKi~R~~L~~~~~ 751 (778)
+|+||||||++|++...
T Consensus 989 ~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 989 LTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred CCCCCChhHHhhcCccc
Confidence 99999999999987654
No 21
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.9e-74 Score=795.05 Aligned_cols=568 Identities=19% Similarity=0.255 Sum_probs=469.4
Q ss_pred CCCCCccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCcccc-c
Q 004034 101 PSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVC-S 179 (778)
Q Consensus 101 ~~~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~ 179 (778)
....++|||.+.+. +..+++...++|++++|+++++.+++++|..+|++++++|+..++++.. +. ..+... ++ .
T Consensus 2971 ~~~~~~~dL~l~v~--~~~~~l~~~~~y~~~~~~~~~i~~l~~~f~~lL~~l~~~p~~~i~~l~~-~~-~~~~~~-~~~~ 3045 (5163)
T PRK12316 2971 DGAATQFDLALDTW--ESAEGLGASLTYATDLFDARTVERLARHWQNLLRGMVENPQRSVDELAM-LD-AEERGQ-LLEA 3045 (5163)
T ss_pred cCCccceeeEEEEE--ecCCcEEEEEEECcCCCCHHHHHHHHHHHHHHHHHHHhCCCCchhhccC-CC-HHHHHH-HHHH
Confidence 34568899999877 4445688899999999999999999999999999999999999988742 11 101000 00 0
Q ss_pred ccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCE
Q 004034 180 ENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDA 259 (778)
Q Consensus 180 ~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~ 259 (778)
++.... .. ....+++++|+++++ ++||++|+.+. ++.+||+||+++++++|++|++.|+++|++
T Consensus 3046 ~~~~~~------~~---~~~~~~~~~~~~~~~-~~p~~~Av~~~------~~~lTY~eL~~~~~~lA~~L~~~gv~~~~~ 3109 (5163)
T PRK12316 3046 WNATAA------EY---PLERGVHRLFEEQVE-RTPDAVALAFG------EQRLSYAELNRRANRLAHRLIERGVGPDVL 3109 (5163)
T ss_pred hCCCCc------CC---CCcCCHHHHHHHHHH-hCCCCeeEeeC------CeEEeHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 110000 00 111268999999999 89999999987 689999999999999999999999999999
Q ss_pred EEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCC
Q 004034 260 VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI 339 (778)
Q Consensus 260 Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (778)
|+|++++++++++++|||+|+|++|||++|.+|.+|+.+++++++++++|+++.... .. .
T Consensus 3110 V~l~~~~s~~~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~---------------~~-----~ 3169 (5163)
T PRK12316 3110 VGVAVERSLEMVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHLRL---------------PL-----A 3169 (5163)
T ss_pred EEEEccCCHHHHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCccccC---------------Cc-----c
Confidence 999999999999999999999999999999999999999999999999998764310 00 0
Q ss_pred CccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHH
Q 004034 340 SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT 419 (778)
Q Consensus 340 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~ 419 (778)
....++.++... .......+.....++++|||+|||||||+||||+++|+++ .+...+
T Consensus 3170 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l-~~~~~~ 3227 (5163)
T PRK12316 3170 QGVQVLDLDRGD---------------------ENYAEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSAL-SNHLCW 3227 (5163)
T ss_pred CCccEEEecccc---------------------ccccccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHH-HHHHHH
Confidence 011123222210 0001112233456899999999999999999999999995 555666
Q ss_pred HHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcC
Q 004034 420 FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDG 499 (778)
Q Consensus 420 ~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~ 499 (778)
+...+++.++|+++++++++|+.+ ++++|.+|+.|+++++.+... ..++..+.+.++++++|++..+|++++.+++..
T Consensus 3228 ~~~~~~~~~~d~~l~~~~~~fd~~-~~~i~~~L~~G~~l~~~~~~~-~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~ 3305 (5163)
T PRK12316 3228 MQQAYGLGVGDRVLQFTTFSFDVF-VEELFWPLMSGARVVLAGPED-WRDPALLVELINSEGVDVLHAYPSMLQAFLEEE 3305 (5163)
T ss_pred HHHhhCCCcccEEEeecCccHHHH-HHHHHHHHhCCCEEEEcChhh-cCCHHHHHHHHHHcCCcEEEcCHHHHHHHHhcc
Confidence 677889999999999999999986 789999999999999976543 348899999999999999999999999988653
Q ss_pred CcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEE
Q 004034 500 NEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVI 579 (778)
Q Consensus 500 ~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~I 579 (778)
. ...+++||.+++|||++++++.++|. .+ ++++|.||+||++++++............++|+|++|++++|
T Consensus 3306 ~----~~~~~~lr~~~~gGe~l~~~~~~~~~--~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i 3376 (5163)
T PRK12316 3306 D----AHRCTSLKRIVCGGEALPADLQQQVF--AG---LPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYI 3376 (5163)
T ss_pred c----cccCCcceEEEEccccCCHHHHHHHH--hC---CcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEE
Confidence 2 22567899999999999999999887 23 679999999999987664332222234678999999999999
Q ss_pred ECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCC----CCCeEEcCcEEEEecCCeEEEEeecCCEEEeCc
Q 004034 580 VDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSG 655 (778)
Q Consensus 580 vd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~----~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G 655 (778)
+|++++++|.|+.|||+|+| |++++||+|+++.+.+.|... ..+||+|||+|++++||.|+|+||+|+|||++|
T Consensus 3377 ~d~~~~~~p~G~~GEl~i~G--~~v~~GY~~~~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~qvKi~G 3454 (5163)
T PRK12316 3377 LDGSLEPVPVGALGELYLGG--EGLARGYHNRPGLTAERFVPDPFVPGERLYRTGDLARYRADGVIEYIGRVDHQVKIRG 3454 (5163)
T ss_pred ECCCCCCCCCCCCceEEecc--cccchhcCCChhhchhhCCCCCCCCCCeeEecCceEEECCCCCEEEecccCCeEeeCc
Confidence 99999999999999999999 999999999999888877542 346999999999999999999999999999999
Q ss_pred eeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCC
Q 004034 656 HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPK 735 (778)
Q Consensus 656 ~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~ 735 (778)
+||+|+|||++|.+||+|.+|+|++.. ++.++|||++...... ..++|+++|+++||.||+|..|+++++||+
T Consensus 3455 ~rIel~eIE~~l~~~~~V~~a~v~~~~----~~~l~a~vv~~~~~~~---~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~ 3527 (5163)
T PRK12316 3455 FRIELGEIEARLLEHPWVREAVVLAVD----GRQLVAYVVPEDEAGD---LREALKAHLKASLPEYMVPAHLLFLERMPL 3527 (5163)
T ss_pred EeeChHHHHHHHHhCCCcceEEEEEcc----CCeEEEEEEcCCcCcc---cHHHHHHHHHhhCCcccCcceeeeHhhcCC
Confidence 999999999999999999999998764 5689999998654322 257899999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHh
Q 004034 736 TRSGKIMRRILRKIAS 751 (778)
Q Consensus 736 T~sGKi~R~~L~~~~~ 751 (778)
|+||||||++|++...
T Consensus 3528 t~~GKvdr~~L~~~~~ 3543 (5163)
T PRK12316 3528 TPNGKLDRKALPRPDA 3543 (5163)
T ss_pred CCCcchhHHhcCCCcc
Confidence 9999999999987543
No 22
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-72 Score=651.26 Aligned_cols=511 Identities=31% Similarity=0.418 Sum_probs=420.9
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++...|.+++. .+|+++|+++.+.. .++||+||.++++++|+.|++.||++||+|+|+++|++++++++|||+++
T Consensus 12 ~~~~~l~~~a~-~~~~~~a~~~~~~~----~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 12 TLASLLERAAR-RNPDRPALIFLGRG----GRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred cHHHHHHHHHH-hCCCceEEEEcCCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 47788999988 89999999998432 25999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.+..+++.+++++++++++++++... ..+....... +....+........
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-------- 145 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFA---------ALLEAVAEAL----PVVLVVLLVGDADD-------- 145 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccch---------hHHHHHhccC----CcceEEEecccccc--------
Confidence 99999999999999999999999999999987631 1222211111 11111111111000
Q ss_pred CCCcccchhhccCCCCC-CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC--CCCCcEEEEeCC
Q 004034 361 QDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD--YKPSDVYWCTAD 437 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~--~~~~d~~l~~~~ 437 (778)
. ....+.+.....+. ......++++|+++|+|||||||.||||++||+|++.+ .......++ +.+.|++++.+|
T Consensus 146 ~--~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~-~~~~~~~~~~~~~~~d~~l~~lP 222 (534)
T COG0318 146 R--LPITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLAN-AAGIAAALGGGLTPDDVVLSWLP 222 (534)
T ss_pred c--ccccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHH-HHHHHHHhcccCCCCceEEEecC
Confidence 0 00123333222111 11122267999999999999999999999999996655 344555666 899999999999
Q ss_pred cchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCC-ceeEEEE
Q 004034 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK-SLRVLGS 516 (778)
Q Consensus 438 ~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~-sLr~v~~ 516 (778)
++|++|+...++.+++.|+++++..+. .++++.++..+.++++|+++++|+++..|+...... ..++. +||.+++
T Consensus 223 l~H~~Gl~~~~~~~~~~G~~~v~~~~~--~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~--~~~~~~~lr~~~~ 298 (534)
T COG0318 223 LFHIFGLIVGLLAPLLGGGTLVLLSPE--PFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKD--DDDLSSSLRLVLS 298 (534)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEeCCCC--CcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccC--ccccccceEEEEe
Confidence 999999887888889999999998632 358999999999999999999999999998886532 23344 4999999
Q ss_pred ecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCc-eeCCCeeeEE
Q 004034 517 VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGV-EIEGECSGYL 595 (778)
Q Consensus 517 gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~-~~~~g~~GEL 595 (778)
||+++++++++.+.+.++. ..+++.||+||++.+++.........+.+++|+|+++++++|+|+++. ++| |..|||
T Consensus 299 gg~~~~~~~~~~~~~~~~~--~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei 375 (534)
T COG0318 299 GGAPLPPELLERFEERFGP--IAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEI 375 (534)
T ss_pred cCCcCCHHHHHHHHHHhCC--CceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEE
Confidence 9999999999999999983 479999999999976665433220135677899999999999997665 556 889999
Q ss_pred EEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccce
Q 004034 596 CIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAE 675 (778)
Q Consensus 596 ~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~e 675 (778)
+|+| |+++.|||++|+.+.+.|.. +|||+|||+|++|+||+++|+||.+|+||.+|++|+|.|||.+|.+||.|.+
T Consensus 376 ~irg--p~v~~GY~~~pe~t~~~f~~--~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~ 451 (534)
T COG0318 376 WVRG--PNVMKGYWNRPEATAEAFDE--DGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAE 451 (534)
T ss_pred EEEC--chhhhhhcCChHHHHHhhcc--CCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcce
Confidence 9999 89999999999999885533 5899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 676 AAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 676 a~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
|+|++++|+..|+.++|+|+++++.. .....++|+++|+++++.|++|+.++++++||+|++||++|+.|++.+..
T Consensus 452 aavvgvpd~~~Ge~~~a~v~~~~~~~-~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 452 AAVVGVPDERWGERVVAVVVLKPGGD-AELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred EEEEeCCCCccCceEEEEEEEcCCCC-CCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 99999999999999999999987632 01126899999999999999999999999999999999999999998875
No 23
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-72 Score=655.80 Aligned_cols=499 Identities=23% Similarity=0.311 Sum_probs=414.4
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++||++|+++. .+++||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++
T Consensus 50 ~~~~~~~~~a~-~~pd~~Al~~~------~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~ 122 (549)
T PRK07788 50 PFAGLVAHAAR-RAPDRAALIDE------RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKV 122 (549)
T ss_pred hHHHHHHHHHH-HCCCceEEEEC------CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 57899999998 89999999976 578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++.+++++++++++|+++... ..+....... ..+..++...... ..
T Consensus 123 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~-------~~ 182 (549)
T PRK07788 123 GARIILLNTGFSGPQLAEVAAREGVKALVYDDEFT---------DLLSALPPDL----GRLRAWGGNPDDD-------EP 182 (549)
T ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhH---------HHHHhhcccc----ccceEEEEecCcc-------cc
Confidence 99999999999999999999999999999986542 1121111111 1222222111110 00
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
.......+++.+...... .....++++++|+|||||||+||||+++|++++.. .......+++.++|++++..|++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~-~~~~~~~~~~~~~d~~~~~~p~~~ 259 (549)
T PRK07788 183 SGSTDETLDDLIAGSSTA--PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAP-LAGLLSRVPFRAGETTLLPAPMFH 259 (549)
T ss_pred CCcCcccHHHHhcCCCCC--CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHH-HHHHHhhCCCCcCCeEEEccchHH
Confidence 001223344444332211 12234678899999999999999999999996544 334445678889999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
..++ ..++.++..|+++++... +++..+++.++++++|++.++|++++.|++.........++++||.+++|||+
T Consensus 260 ~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~ 334 (549)
T PRK07788 260 ATGW-AHLTLAMALGSTVVLRRR----FDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSA 334 (549)
T ss_pred HHHH-HHHHHHHHhCCEEEECCC----CCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCC
Confidence 9885 456778999999998742 58999999999999999999999999998875432244568899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecC
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~ 600 (778)
+++++++++.+.++ ++++|.||+||++..++... ......++++|+|+++++++|+|+++++++.|+.|||+|+|
T Consensus 335 l~~~~~~~~~~~~~---~~l~~~YG~TE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g- 409 (549)
T PRK07788 335 LSPELATRALEAFG---PVLYNLYGSTEVAFATIATP-EDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVVGRIFVGN- 409 (549)
T ss_pred CCHHHHHHHHHHhC---ccceeccCcchhchhhccCh-hhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCeEEEEEeC-
Confidence 99999999999887 57999999999986544322 22234567899999999999999999999999999999999
Q ss_pred CCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEE
Q 004034 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVG 680 (778)
Q Consensus 601 ~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 680 (778)
+.++.||+++++. . ..+|||+|||++++|+||+++|+||.||+||++|++|+|.|||++|.+||+|.+|+|++
T Consensus 410 -~~~~~gY~~~~~~--~----~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~ 482 (549)
T PRK07788 410 -GFPFEGYTDGRDK--Q----IIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIG 482 (549)
T ss_pred -CCccccccCCCcc--c----ccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEEC
Confidence 8899999998864 1 13689999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHH
Q 004034 681 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKI 749 (778)
Q Consensus 681 ~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~ 749 (778)
++++..++.++|||+++++...+ .++|+++++++|+.|++|..|+++++||+|++|||+|++|+++
T Consensus 483 ~~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 483 VDDEEFGQRLRAFVVKAPGAALD---EDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred CcCcccccEEEEEEEeCCCCCCC---HHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99988899999999998765444 5789999999999999999999999999999999999999864
No 24
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=6.6e-73 Score=777.71 Aligned_cols=576 Identities=20% Similarity=0.273 Sum_probs=471.6
Q ss_pred CCCCCccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCcccccc
Q 004034 101 PSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSE 180 (778)
Q Consensus 101 ~~~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 180 (778)
....++|||.+.+.... ++.+...+.|++++|+++++++++++|..+|++++++|++.++++.. +. ..+... +..+
T Consensus 1046 ~~~~~~~~l~l~~~~~~-~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~~~~~~p~~~~~~l~l-~~-~~~~~~-l~~~ 1121 (4334)
T PRK05691 1046 HSREAKFDLQLHSEEDR-NGRLTLSFDYAAELFDAATIERLAEHFLALLEQVCEDPQRALGDVQL-LD-AAERAQ-LAQW 1121 (4334)
T ss_pred cCCcccceEEEEEEECC-CCcEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhCcccchhhhcC-CC-HHHHHH-HHhc
Confidence 34457899988765222 34577899999999999999999999999999999999999998842 11 111001 1111
Q ss_pred cccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 004034 181 NLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAV 260 (778)
Q Consensus 181 ~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V 260 (778)
+.... .....+++++|+++++ .+||++|+++. ++++||+||+++++++|++|+++|+++|++|
T Consensus 1122 ~~~~~----------~~~~~~l~~~~~~~a~-~~p~~~Al~~~------~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V 1184 (4334)
T PRK05691 1122 GQAPC----------APAQAWLPELLNEQAR-QTPERIALVWD------GGSLDYAELHAQANRLAHYLRDKGVGPDVCV 1184 (4334)
T ss_pred cCCCC----------CCccCCHHHHHHHHHH-hCCCCeEEEEC------CceEeHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 11000 0112368999999999 89999999986 5789999999999999999999999999999
Q ss_pred EEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCC
Q 004034 261 IIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGIS 340 (778)
Q Consensus 261 ai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (778)
+|++++++++++++|||+|+|++|+|++|.+|.+++.+++++++++++|+++..... +... ..
T Consensus 1185 ~i~~~~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~-------------~~~~----~~ 1247 (4334)
T PRK05691 1185 AIAAERSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLER-------------LPQA----EG 1247 (4334)
T ss_pred EEEeCCCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhh-------------cccc----cC
Confidence 999999999999999999999999999999999999999999999999998654210 0000 00
Q ss_pred ccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHH
Q 004034 341 VDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF 420 (778)
Q Consensus 341 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~ 420 (778)
. .++.++... ........+.....+++++||+|||||||+||||+++|+++ .+...+.
T Consensus 1248 ~-~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l-~~~~~~~ 1305 (4334)
T PRK05691 1248 V-SAIALDSLH--------------------LDSWPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAAL-AERLQWM 1305 (4334)
T ss_pred c-eEEeecccc--------------------ccccCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHH-HHHHHHH
Confidence 1 112111110 00001111223456899999999999999999999999995 4555566
Q ss_pred HHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCC
Q 004034 421 KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN 500 (778)
Q Consensus 421 ~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~ 500 (778)
...+++.++|++++++|++|+.+ ++++|.+|++|+++++.+.... .++..+++.|++++||++.++|++++.|.+...
T Consensus 1306 ~~~~~~~~~d~~l~~~~~~fd~s-~~~~~~~L~~G~~l~i~~~~~~-~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~ 1383 (4334)
T PRK05691 1306 QATYALDDSDVLMQKAPISFDVS-VWECFWPLITGCRLVLAGPGEH-RDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL 1383 (4334)
T ss_pred HHhcCCCCCCEEEEeCCccHHHH-HHHHHHHHhCCCEEEEcCcccc-CCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc
Confidence 67789999999999999999987 6789999999999999865433 589999999999999999999999999987532
Q ss_pred cccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEE
Q 004034 501 EYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV 580 (778)
Q Consensus 501 ~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Iv 580 (778)
...+++||.+++|||++++++.++|.+.++ +++++|.||+||+++.++............++|+|++|++++|+
T Consensus 1384 ----~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~ 1457 (4334)
T PRK05691 1384 ----AAACTSLRRLFSGGEALPAELRNRVLQRLP--QVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVL 1457 (4334)
T ss_pred ----cccCCcccEEEEeecCCCHHHHHHHHHhCC--CcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEE
Confidence 236789999999999999999999998876 47899999999998765532211122345789999999999999
Q ss_pred CCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCC-----CCCeEEcCcEEEEecCCeEEEEeecCCEEEeCc
Q 004034 581 DEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSG 655 (778)
Q Consensus 581 d~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~-----~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G 655 (778)
|++++++|.|+.|||+|+| |++++||+|+++.+.+.|... ..+||+|||+|++++||+++|+||+|+|||++|
T Consensus 1458 d~~~~~vp~G~~GEL~i~G--~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G 1535 (4334)
T PRK05691 1458 DAELNLLPPGVAGELCIGG--AGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRG 1535 (4334)
T ss_pred CCCCCCCCCCCceEEEecC--cccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECC
Confidence 9999999999999999999 899999999999888877542 234999999999999999999999999999999
Q ss_pred eeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCC
Q 004034 656 HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPK 735 (778)
Q Consensus 656 ~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~ 735 (778)
+||+|+|||++|.+||+|.+|+|++..+. .++.+++|++...+.... .++|+++|+++||.||+|..|+++++||+
T Consensus 1536 ~rie~~eIE~~l~~~~~V~~a~v~~~~~~-~~~~lva~~~~~~~~~~~---~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~ 1611 (4334)
T PRK05691 1536 FRVEPEEIQARLLAQPGVAQAAVLVREGA-AGAQLVGYYTGEAGQEAE---AERLKAALAAELPEYMVPAQLIRLDQMPL 1611 (4334)
T ss_pred EEcCHHHHHHHHHhCCCcceEEEEEeeCC-CCCEEEEEEEeCCCCCCC---HHHHHHHHHHhCccccCCcEEEEccccCC
Confidence 99999999999999999999999976654 458899999987654433 46899999999999999999999999999
Q ss_pred CCCCcccHHHHHHHH
Q 004034 736 TRSGKIMRRILRKIA 750 (778)
Q Consensus 736 T~sGKi~R~~L~~~~ 750 (778)
|+||||||++|++..
T Consensus 1612 t~~GKidr~~L~~~~ 1626 (4334)
T PRK05691 1612 GPSGKLDRRALPEPV 1626 (4334)
T ss_pred CCCCCcChhhcCccc
Confidence 999999999998754
No 25
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.7e-71 Score=654.18 Aligned_cols=524 Identities=25% Similarity=0.341 Sum_probs=425.1
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCC--CCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEAND--PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~--~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l 278 (778)
+++++|+++++ ++||++|+++.... ....+++||+||.++++++|+.|+++|+++||+|++++||++++++++|||+
T Consensus 26 t~~~~l~~~a~-~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~ 104 (632)
T PRK07529 26 STYELLSRAAA-RHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGE 104 (632)
T ss_pred CHHHHHHHHHH-HCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 57899999998 89999999874221 1236799999999999999999999999999999999999999999999999
Q ss_pred HhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccc
Q 004034 279 RIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENT 358 (778)
Q Consensus 279 ~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 358 (778)
++| +++|++|.++.+++.+++++++++++|+++.... ......+....... +.++.++.++....... ..
T Consensus 105 ~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~-~~ 174 (632)
T PRK07529 105 AAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPG----TDIWQKVAEVLAAL----PELRTVVEVDLARYLPG-PK 174 (632)
T ss_pred HhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCC----chHHHHHHHHHhcC----CcceeEEEecCcccccc-cc
Confidence 999 6799999999999999999999999999876421 11222233333322 45555655543211000 00
Q ss_pred cC--------CCCcccchhhccCCCCCC--CCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCC
Q 004034 359 KW--------QDGRDIWWQDVVPKYPTK--CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKP 428 (778)
Q Consensus 359 ~~--------~~~~~~~~~~~l~~~~~~--~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~ 428 (778)
.+ .......|.+.+...+.. .......++++++|+|||||||.||||+++|++++ ...+.....+++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~-~~~~~~~~~~~~~~ 253 (632)
T PRK07529 175 RLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEV-ANAWLGALLLGLGP 253 (632)
T ss_pred cccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHH-HHHHHHHHhcCCCC
Confidence 00 011223444444433221 12233467999999999999999999999999954 44455556678889
Q ss_pred CcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCC---hhHHHHHHHHhCccEEEecHHHHHHHHhcCCccccc
Q 004034 429 SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPD---SGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (778)
Q Consensus 429 ~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~---~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~ 505 (778)
+|++++..|++|..+....++.+|..|+++++.+.... .+ ...+|++++++++|++.++|+++..|++... ..
T Consensus 254 ~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~-~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---~~ 329 (632)
T PRK07529 254 GDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGY-RGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV---DG 329 (632)
T ss_pred CCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCcccc-CcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc---cC
Confidence 99999999999999887888999999999999764221 12 3678999999999999999999999988753 23
Q ss_pred CCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEE--CCC
Q 004034 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV--DEK 583 (778)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Iv--d~~ 583 (778)
.++++||.+++||+++++++.+++.+.++ +++++.||+||++.++...... ....++++|+|+++++++|+ |++
T Consensus 330 ~~~~slr~v~~gg~~l~~~l~~~~~~~~g---~~l~~~YG~TE~~~~~~~~~~~-~~~~~~svG~~~p~~~v~i~~~d~~ 405 (632)
T PRK07529 330 HDISSLRYALCGAAPLPVEVFRRFEAATG---VRIVEGYGLTEATCVSSVNPPD-GERRIGSVGLRLPYQRVRVVILDDA 405 (632)
T ss_pred CCccceEEEEEcCCCCCHHHHHHHHHHhC---CcEeeeecccccCcccccCCcc-ccccCCCcccccCCceEEEEEcCCC
Confidence 47899999999999999999999999886 7899999999998765543322 23467899999999998884 777
Q ss_pred C---ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCH
Q 004034 584 G---VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGT 660 (778)
Q Consensus 584 g---~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~ 660 (778)
| ++++.|+.|||+|+| |+++.||++++. ....++ .+|||+|||+|++|+||+++|.||.||+||++|++|+|
T Consensus 406 g~~~~~~~~g~~Gel~v~g--p~v~~GY~~~~~-~~~~~~--~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p 480 (632)
T PRK07529 406 GRYLRDCAVDEVGVLCIAG--PNVFSGYLEAAH-NKGLWL--EDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDP 480 (632)
T ss_pred CcccccCCCCCceEEEEEC--CCccccccCCcc-cccccc--CCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECH
Confidence 7 889999999999999 899999998754 334443 36899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcC-CCccccEEEECCCCCCCCCC
Q 004034 661 AEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIG-AFAAPDKIHWAPGLPKTRSG 739 (778)
Q Consensus 661 ~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp-~~~~P~~i~~v~~lP~T~sG 739 (778)
.|||++|.+||+|.+|+|++++++..++.++|||+++++...+ .++|+++++++++ .+++|+.|+++++||+|++|
T Consensus 481 ~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~---~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~G 557 (632)
T PRK07529 481 AAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASAT---EAELLAFARDHIAERAAVPKHVRILDALPKTAVG 557 (632)
T ss_pred HHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCC---HHHHHHHHHHhcchhccCCcEEEEecCCCCCCCC
Confidence 9999999999999999999999998899999999998776544 4689999999997 47999999999999999999
Q ss_pred cccHHHHHHHHhc
Q 004034 740 KIMRRILRKIASR 752 (778)
Q Consensus 740 Ki~R~~L~~~~~~ 752 (778)
||+|++|++.+..
T Consensus 558 Ki~r~~Lr~~~~~ 570 (632)
T PRK07529 558 KIFKPALRRDAIR 570 (632)
T ss_pred cccHHHHHHHHHH
Confidence 9999999988754
No 26
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-71 Score=663.90 Aligned_cols=483 Identities=22% Similarity=0.313 Sum_probs=404.7
Q ss_pred HHHHHHHhhhcc--CCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 202 CYNCLDRNIEAG--LGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 202 ~~~~l~~~~~~~--~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
+.++|.+++. . +||++|++.. +.+||+||+++++++|++|+++|+++||+|+|+++|++++++++|||++
T Consensus 6 ~~~~~~~~a~-~~~~pd~~a~~~~-------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 77 (705)
T PRK06060 6 LAGLLAEQAS-EAGWYDRPAFYAA-------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLA 77 (705)
T ss_pred HHHHHHHHHh-hccCCCceEEEec-------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 5677888776 4 7999999853 3799999999999999999999999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccccc
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (778)
+|++++|++|.++.+++.+++++++++++|+++........ . .++.....
T Consensus 78 aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~--------------------~-~~~~~~~~--------- 127 (705)
T PRK06060 78 RGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQP--------------------S-RVAEAAEL--------- 127 (705)
T ss_pred hCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc--------------------c-ccchhhhh---------
Confidence 99999999999999999999999999999997643211000 0 00000000
Q ss_pred CCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcc
Q 004034 360 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
+.+.....+ .......+++++||+|||||||+||||+++|++++.+........+++.++|++++..+++
T Consensus 128 --------~~~~~~~~~--~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 197 (705)
T PRK06060 128 --------MSEAARVAP--GGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMY 197 (705)
T ss_pred --------hhhccccCC--CCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccch
Confidence 000000000 0112345789999999999999999999999996555443334467888999999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|..++...++.+|..|+++++.+.. .++..++++++++++|+++++|+++..|++... ..++++||.+++|||
T Consensus 198 ~~~~~~~~~~~~l~~G~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~----~~~~~slr~i~~gGe 270 (705)
T PRK06060 198 FAYGLGNSVWFPLATGGSAVINSAP---VTPEAAAILSARFGPSVLYGVPNFFARVIDSCS----PDSFRSLRCVVSAGE 270 (705)
T ss_pred hhcchhHHHHHHHhcCCEEEEeCCC---CCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc----cccccceeEEEEecC
Confidence 9888767788999999999997532 477888999999999999999999999887542 235789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEec
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g 599 (778)
++++++++++.+.++ +++++|.||+||++.+....... ...++++|+|+++++++|+|+++++++.|+.|||+|+|
T Consensus 271 ~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~GEl~i~g 346 (705)
T PRK06060 271 ALELGLAERLMEFFG--GIPILDGIGSTEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVAPDGTTAGPGVEGDLWVRG 346 (705)
T ss_pred cCCHHHHHHHHHHcC--CCceEeeeeccccCceEEeccCC--CCCcCcccccCCCcEEEEECCCCCCCCCCCceEEEEcc
Confidence 999999999999886 47899999999998654432211 23567899999999999999999999999999999999
Q ss_pred CCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEE
Q 004034 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 679 (778)
Q Consensus 600 ~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv 679 (778)
|++++||||+++.+.. .+|||+|||+|++++||+++|+||.||+||++|+||+|.|||++|.+||.|.+++|+
T Consensus 347 --~~v~~GY~~~~~~~~~-----~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv 419 (705)
T PRK06060 347 --PAIAKGYWNRPDSPVA-----NEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVV 419 (705)
T ss_pred --chhhhhhhCCCccccc-----CCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 8999999999975422 368999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHH
Q 004034 680 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 750 (778)
Q Consensus 680 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~ 750 (778)
+++++..++.+++||+...+...+.+..++|+++++++||.||+|..|+++++||+|+||||+|++|++.+
T Consensus 420 ~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 420 AVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred eecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 99988888899999998766544444457899999999999999999999999999999999999999865
No 27
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.8e-70 Score=636.17 Aligned_cols=511 Identities=25% Similarity=0.343 Sum_probs=423.6
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ .+||++|+++.+...+..+++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 25 ~l~~~l~~~a~-~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~ 103 (547)
T PRK13295 25 TINDDLDACVA-SCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRI 103 (547)
T ss_pred CHHHHHHHHHH-HCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 47788999988 89999999986432233489999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++.+++++++++++|+++.... ......+.+....+ +.+..++.++....
T Consensus 104 G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 167 (547)
T PRK13295 104 GAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRG----FDHAAMARRLRPEL----PALRHVVVVGGDGA-------- 167 (547)
T ss_pred CcEEeccccccCHHHHHHHHHhcCceEEEEeccccC----cchHHHHHHHhhhC----CCcceEEEecCCCc--------
Confidence 999999999999999999999999999999876421 11122222222222 34445554432210
Q ss_pred CCCcccchhhccCC--------CCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEE
Q 004034 361 QDGRDIWWQDVVPK--------YPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 432 (778)
Q Consensus 361 ~~~~~~~~~~~l~~--------~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~ 432 (778)
..|.+.+.. ...........++++++|+|||||||.||||+++|++++.+.. .....+++.++|++
T Consensus 168 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~ 241 (547)
T PRK13295 168 -----DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIV-PYAERLGLGADDVI 241 (547)
T ss_pred -----cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHH-HHHHHhCCCCCCeE
Confidence 011111110 0111112234678999999999999999999999999655443 35567888999999
Q ss_pred EEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCcee
Q 004034 433 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 512 (778)
Q Consensus 433 l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr 512 (778)
++.+|++|..++++.++.+|..|+++++.+. .++..+++.++++++|++.++|++++.|..... ....++++||
T Consensus 242 l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~--~~~~~~~~l~ 315 (547)
T PRK13295 242 LMASPMAHQTGFMYGLMMPVMLGATAVLQDI----WDPARAAELIRTEGVTFTMASTPFLTDLTRAVK--ESGRPVSSLR 315 (547)
T ss_pred EEecCchhhhhHHHHHHHHHHcCCeEEeCCC----CCHHHHHHHHHHcCCcEEEecHHHHHHHHhccc--ccCCCcccce
Confidence 9999999999888889999999999998753 488999999999999999999999999987643 2235678999
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCee
Q 004034 513 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECS 592 (778)
Q Consensus 513 ~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~ 592 (778)
.+++|||++++++++++.+.++ +++++.||+||++.+.+............++|+|+++++++|+|+++++++.|+.
T Consensus 316 ~~~~~G~~l~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~ 392 (547)
T PRK13295 316 TFLCAGAPIPGALVERARAALG---AKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQI 392 (547)
T ss_pred EEEEecCCCCHHHHHHHHHHhC---CCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCCC
Confidence 9999999999999999999886 7899999999998765433221112234678999999999999999999999999
Q ss_pred eEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCc
Q 004034 593 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 672 (778)
Q Consensus 593 GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~ 672 (778)
|||+|+| ++++.||+++++.+... .+|||+|||+|++++||++++.||.||+||++|++|+|.|||++|.+||+
T Consensus 393 Gel~v~g--~~~~~gY~~~~~~t~~~----~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~ 466 (547)
T PRK13295 393 GRLQVRG--CSNFGGYLKRPQLNGTD----ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPA 466 (547)
T ss_pred CeEEEEc--CcccccccCCccccccC----CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCC
Confidence 9999999 89999999999877654 37899999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHh-hcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 673 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 673 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~-~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
|.+++|++++++..++.++++|++.++...+ .+++++++++ .+++|++|..|+++++||+|.+||++|++|+++++
T Consensus 467 v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~ 543 (547)
T PRK13295 467 IAQVAIVAYPDERLGERACAFVVPRPGQSLD---FEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLR 543 (547)
T ss_pred eeeEEEEeeecCCCCcEEEEEEEeCCCCCCC---HHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHh
Confidence 9999999999988889999999988764433 4678888986 79999999999999999999999999999999886
Q ss_pred c
Q 004034 752 R 752 (778)
Q Consensus 752 ~ 752 (778)
+
T Consensus 544 ~ 544 (547)
T PRK13295 544 G 544 (547)
T ss_pred c
Confidence 4
No 28
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=8.9e-71 Score=642.32 Aligned_cols=515 Identities=21% Similarity=0.214 Sum_probs=408.9
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++||++|+++. ++++||+||.++++++|++|.++|+++||+|+|+++|++++++++|||+++
T Consensus 8 ~~~~~~~~~~~-~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~ 80 (563)
T PLN02860 8 HICQCLTRLAT-LRGNAVVTISG------NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACA 80 (563)
T ss_pred HHHHHHHHHHH-hcCCceEEecC------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhc
Confidence 46788999998 89999999865 578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHH-HHHhhcCCCccEEEEEccCCcccccccc
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAAL-DECAKSGISVDVCLTYENQSAMTRENTK 359 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (778)
|++++|++|.++.+++.+++++++++++++++.... ...... ..+ +.+..++..+...... ...
T Consensus 81 Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~----~~~~~~i~~~~~~~~~--~~~ 145 (563)
T PLN02860 81 GGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSS---------WYEELQNDRL----PSLMWQVFLESPSSSV--FIF 145 (563)
T ss_pred cEEEEeCCcccCHHHHHHHHHhcCceEEEEecccch---------HHHHHhhccC----CceeEEEEecCccccc--ccc
Confidence 999999999999999999999999999999875321 011110 111 2233333333211000 000
Q ss_pred CCCCcccchhhccCCC-CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCc
Q 004034 360 WQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 438 (778)
Q Consensus 360 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 438 (778)
+ ...+.+.+..... ..........++++++|+|||||||+||||+++|++++.+.. .....+++.++|+++..+|+
T Consensus 146 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~-~~~~~~~~~~~d~~l~~~pl 222 (563)
T PLN02860 146 L--NSFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSL-AKIAIVGYGEDDVYLHTAPL 222 (563)
T ss_pred h--hhccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHH-HHHhhcCCCCCCEEEEecCc
Confidence 0 0000111111100 000111234678999999999999999999999999654433 33446788999999999999
Q ss_pred chhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEec
Q 004034 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (778)
Q Consensus 439 ~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gG 518 (778)
+|+.++ ..++.+|..|+++++.+. +++..+++.|+++++|++.++|+++..|++..........+++||.+++||
T Consensus 223 ~h~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG 297 (563)
T PLN02860 223 CHIGGL-SSALAMLMVGACHVLLPK----FDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGG 297 (563)
T ss_pred hhhccH-HHHHHHHHcCceEEecCC----CCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCC
Confidence 999885 467889999999998753 489999999999999999999999999987643222234678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCCcceecccccccccceecccCC-CC-------------------C-CCCCCCcCcCcCCceE
Q 004034 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP-GA-------------------W-PQKPGSATFPFFGVQP 577 (778)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~-~~-------------------~-~~~~~~~G~p~~g~~~ 577 (778)
+++++++++++.+.++ ++++++.||+||+++.++.... .. . .....++|+|++++++
T Consensus 298 ~~l~~~~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v 375 (563)
T PLN02860 298 GSLSSRLLPDAKKLFP--NAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVEL 375 (563)
T ss_pred CcCCHHHHHHHHHhcC--CCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEE
Confidence 9999999999999885 4789999999999864432211 10 0 0112368999999999
Q ss_pred EEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCcee
Q 004034 578 VIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHR 657 (778)
Q Consensus 578 ~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~r 657 (778)
+|+|++ .|+.|||+|+| |+++.|||++++.+...+.. +|||+|||+|++|+||+++|+||.||+||++|++
T Consensus 376 ~i~~~~-----~g~~Gel~v~g--~~~~~GY~~~~~~t~~~~~~--~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~ 446 (563)
T PLN02860 376 KIGLDE-----SSRVGRILTRG--PHVMLGYWGQNSETASVLSN--DGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGEN 446 (563)
T ss_pred EEecCC-----CCceeEEEEec--CcccccccCCccccchhccC--CCeEEccceEEEcCCCCEEEeecccceeEECCEE
Confidence 999875 57899999999 89999999999888776543 6899999999999999999999999999999999
Q ss_pred eCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCC-----------CHHHHHHHHHHHHh-hcCCCcccc
Q 004034 658 IGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY-----------SEELRKSLVLAVRK-QIGAFAAPD 725 (778)
Q Consensus 658 I~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~-----------~~~l~~~l~~~l~~-~Lp~~~~P~ 725 (778)
|+|.|||++|.+||+|.+|+|++++++..++.++|+|+++++... .....++|++++++ .|++|++|+
T Consensus 447 v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~ 526 (563)
T PLN02860 447 VYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPK 526 (563)
T ss_pred ccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccce
Confidence 999999999999999999999999998889999999998765210 01125688999987 599999999
Q ss_pred EEEEC-CCCCCCCCCcccHHHHHHHHhcccCc
Q 004034 726 KIHWA-PGLPKTRSGKIMRRILRKIASRQLDE 756 (778)
Q Consensus 726 ~i~~v-~~lP~T~sGKi~R~~L~~~~~~~~~~ 756 (778)
.|+++ ++||+|++|||+|++|++++.+....
T Consensus 527 ~~~~~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 558 (563)
T PLN02860 527 LFVQWRKPFPLTTTGKIRRDEVRREVLSHLQS 558 (563)
T ss_pred EEEEEecCCCCCcccchhHHHHHHHHHHHHhc
Confidence 98765 67999999999999999998765443
No 29
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.1e-70 Score=651.38 Aligned_cols=525 Identities=18% Similarity=0.202 Sum_probs=406.7
Q ss_pred HHHHHHHHhhhccCCCeEEEEEE---cCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWE---ANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 277 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~---~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~ 277 (778)
+++++|+++++ ++||++|+.+. +...+..+.+||+||.++++++|++|+++|+++||+|+|+++|++|+++++|||
T Consensus 45 tl~~~l~~~a~-~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 123 (651)
T PLN02736 45 TLHDNFVYAVE-TFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHAC 123 (651)
T ss_pred CHHHHHHHHHH-hCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 57899999998 89999999652 111123467999999999999999999999999999999999999999999999
Q ss_pred HHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccc
Q 004034 278 ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN 357 (778)
Q Consensus 278 l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 357 (778)
+++|++++|+++.++.+++.++|++++++++|+++... ..+.+....+ +.++.++.++.........
T Consensus 124 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~---------~~~~~~~~~~----~~l~~ii~~~~~~~~~~~~ 190 (651)
T PLN02736 124 SAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTL---------NTLLSCLSEI----PSVRLIVVVGGADEPLPSL 190 (651)
T ss_pred HHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHH---------HHHHHHhhcC----CCceEEEEECCCchhhhhh
Confidence 99999999999999999999999999999999975431 2222222222 4455565553211000000
Q ss_pred ccCCCCcccchhhccCCCC-CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeC
Q 004034 358 TKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 436 (778)
Q Consensus 358 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~ 436 (778)
..........|++.+.... ...+.....++|+++|+|||||||.||||++||++++.+ .......+++.++|++++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~-~~~~~~~~~~~~~d~~l~~l 269 (651)
T PLN02736 191 PSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIAN-VAGSSLSTKFYPSDVHISYL 269 (651)
T ss_pred hccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHH-HHHHHhccCCCCCCEEEEeC
Confidence 0000011233444433211 111223457899999999999999999999999995544 44445567888999999999
Q ss_pred CcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcc--------------
Q 004034 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY-------------- 502 (778)
Q Consensus 437 ~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~-------------- 502 (778)
|++|+++.. .++.+|..|+++++++. ++..+++.|+++++|+++.+|++++.|.+.....
T Consensus 270 Pl~h~~~~~-~~~~~l~~G~~i~~~~~-----~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (651)
T PLN02736 270 PLAHIYERV-NQIVMLHYGVAVGFYQG-----DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNA 343 (651)
T ss_pred CHHHHHHHH-HHHHHHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 999999854 67789999999998763 6788999999999999999999998876531000
Q ss_pred --------------c----c-------cCCC-CceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceeccc
Q 004034 503 --------------V----T-------RYSR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITP 556 (778)
Q Consensus 503 --------------~----~-------~~~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~ 556 (778)
. . +..+ ++||.+++||+++++++++++.+.+| +++++.||+||+++.++..
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g---~~~~~~YG~TE~~~~~~~~ 420 (651)
T PLN02736 344 AYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG---GRVLEGYGMTETSCVISGM 420 (651)
T ss_pred HHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC---CCeEEEechHHhchheecc
Confidence 0 0 0011 48999999999999999999998887 6899999999998765533
Q ss_pred CCCCCCCCCCCcCcCcCCceEEEECC-CCc---eeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcE
Q 004034 557 LPGAWPQKPGSATFPFFGVQPVIVDE-KGV---EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDG 632 (778)
Q Consensus 557 ~~~~~~~~~~~~G~p~~g~~~~Ivd~-~g~---~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl 632 (778)
... ...++++|+|++|++++|+|. ++. ...++..|||+|+| |++++|||++++.+.+.|.. +|||+|||+
T Consensus 421 ~~~--~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrg--p~v~~GY~~~~~~t~~~~~~--dgw~~TGDl 494 (651)
T PLN02736 421 DEG--DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRG--PIIFKGYYKDEVQTREVIDE--DGWLHTGDI 494 (651)
T ss_pred CCC--CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecC--CccccccccCHHHHHhhhcc--CCCeeccce
Confidence 322 245788999999999999984 322 12233469999999 89999999999998887643 789999999
Q ss_pred EEEecCCeEEEEeecCCEEEe-CceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCC----------CC
Q 004034 633 CSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG----------VP 701 (778)
Q Consensus 633 ~~~~~dG~l~~~GR~dd~Iki-~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~----------~~ 701 (778)
|++|+||+|+|+||.||+||+ +|++|+|.|||++|.+||.|.+|+|++. ..++.++|+|+++++ .+
T Consensus 495 g~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~ 571 (651)
T PLN02736 495 GLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIK 571 (651)
T ss_pred EEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCC
Confidence 999999999999999999998 5999999999999999999999999983 356789999998642 11
Q ss_pred C--------CHHHHHHHHHHHH-----hhcCCCccccEEEECCCCC------CCCCCcccHHHHHHHHhcccCcCC
Q 004034 702 Y--------SEELRKSLVLAVR-----KQIGAFAAPDKIHWAPGLP------KTRSGKIMRRILRKIASRQLDELG 758 (778)
Q Consensus 702 ~--------~~~l~~~l~~~l~-----~~Lp~~~~P~~i~~v~~lP------~T~sGKi~R~~L~~~~~~~~~~~~ 758 (778)
. .+++.+.|.+.+. +.|+.|.+|++|+++++.| +|++|||+|++|++.+.+++++++
T Consensus 572 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~~y 647 (651)
T PLN02736 572 YEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISDMY 647 (651)
T ss_pred ccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHHHH
Confidence 0 1122233333333 2599999999999999886 799999999999999988877665
No 30
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.3e-70 Score=634.86 Aligned_cols=506 Identities=18% Similarity=0.169 Sum_probs=396.4
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.+.|.+.++ ++|+++|+++.. .+++||+||.++++++|+.|.+ .+||+|+|+++|++++++++|||+++
T Consensus 20 ~~~~~~~~~~~-~~p~~~a~~~~~-----~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~ 90 (539)
T PRK06334 20 TVLESFLKLCS-EMTTATVCWDEQ-----LGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLS 90 (539)
T ss_pred cHHHHHHHHHH-hCCCceEEEeCC-----CCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhc
Confidence 57788999998 899999987642 3689999999999999999987 38999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++.++|+++++++||++++.. ..+.+..... . .....++.++.... ...+
T Consensus 91 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~--~-~~~~~~i~~~~~~~----~~~~ 154 (539)
T PRK06334 91 GKIPVMINWSQGLREVTACANLVGVTHVLTSKQLM---------QHLAQTHGED--A-EYPFSLIYMEEVRK----ELSF 154 (539)
T ss_pred CCeeEecCcccchHHHHHHHHHcCCCEEEehHHHH---------HHHhhhhhcc--c-cccccEEEEehhhh----hccH
Confidence 99999999999999999999999999999875431 1111111100 0 00112332222100 0000
Q ss_pred CCCcccchhhccCCC--CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCc
Q 004034 361 QDGRDIWWQDVVPKY--PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 438 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~--~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 438 (778)
............... ..........++++++|+|||||||+||||+++|++++.+ .......+++.++|++++.+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l~~~p~ 233 (539)
T PRK06334 155 WEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLAN-QRACLKFFSPKEDDVMMSFLPP 233 (539)
T ss_pred HHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHH-HHHHHHhcCCCCCceEEEecch
Confidence 000000000000000 0001122356799999999999999999999999996544 4444556788899999999999
Q ss_pred chhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEec
Q 004034 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (778)
Q Consensus 439 ~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gG 518 (778)
+|.+++...++.+|..|+++++... .+++..+++.|+++++|++.++|++++.|++... ....++++||.+++||
T Consensus 234 ~h~~g~~~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~i~~gG 308 (539)
T PRK06334 234 FHAYGFNSCTLFPLLSGVPVVFAYN---PLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAK--KQESCLPSLRFVVIGG 308 (539)
T ss_pred HhhhhhHHHHHHHHHcCCeEEEecC---CCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhh--hcccccccccEEEECC
Confidence 9999877778899999999988643 2489999999999999999999999999987643 2234678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECC-CCceeCCCeeeEEEE
Q 004034 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCI 597 (778)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v 597 (778)
+++++++++++.+.++ ++.+++.||+||++.+++..... .....+++|+|++|++++|+|+ ++++++.|+.|||+|
T Consensus 309 ~~l~~~~~~~~~~~~~--~~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v 385 (539)
T PRK06334 309 DAFKDSLYQEALKTFP--HIQLRQGYGTTECSPVITINTVN-SPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLT 385 (539)
T ss_pred ccCCHHHHHHHHHHCC--CCeEEecccccccCceEEeccCC-CCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEE
Confidence 9999999999999885 47899999999998765543322 1234567999999999999986 578999999999999
Q ss_pred ecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccce--
Q 004034 598 KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAE-- 675 (778)
Q Consensus 598 ~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~e-- 675 (778)
+| |++++|||++++.+.... .+.+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||+|.+
T Consensus 386 ~g--~~~~~GY~~~~~~~~~~~-~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~ 462 (539)
T PRK06334 386 RG--TSLFSGYLGEDFGQGFVE-LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAAD 462 (539)
T ss_pred ec--CcccccccCCccccccee-eCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCcccc
Confidence 99 899999999987532211 1236799999999999999999999999999999999999999999999999998
Q ss_pred ----EEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhh-cCCCccccEEEECCCCCCCCCCcccHHHHHHHH
Q 004034 676 ----AAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 750 (778)
Q Consensus 676 ----a~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~ 750 (778)
++|++++++ ...+++|++.. . + .++|+++++++ ++.|++|+.|+++++||+|++|||+|+.|+++.
T Consensus 463 ~~~~~~v~~~~~~--~~~~~~~~~~~--~--~---~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~ 533 (539)
T PRK06334 463 HAGPLVVCGLPGE--KVRLCLFTTFP--T--S---ISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALA 533 (539)
T ss_pred ccCceEEEcCCCC--ceEEEEEEecc--C--C---hHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHH
Confidence 777777643 24556666532 1 1 46788899886 789999999999999999999999999999986
Q ss_pred hc
Q 004034 751 SR 752 (778)
Q Consensus 751 ~~ 752 (778)
..
T Consensus 534 ~~ 535 (539)
T PRK06334 534 KS 535 (539)
T ss_pred HH
Confidence 53
No 31
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.1e-69 Score=632.69 Aligned_cols=509 Identities=23% Similarity=0.344 Sum_probs=412.6
Q ss_pred ccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCChHHHHHHHHH
Q 004034 199 TNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLAC 277 (778)
Q Consensus 199 ~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~~s~e~vva~LA~ 277 (778)
++....+|++ + .+|+++|+++.. ...++||+||+++++++|+.|++ .|+++||+|+|+++|++++++++|||
T Consensus 40 ~~~~~~l~~~--~-~~~~~~a~~~~~----~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~ 112 (560)
T PLN02574 40 LDAVSFIFSH--H-NHNGDTALIDSS----TGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAV 112 (560)
T ss_pred CCHHHHHhcC--c-ccCCCCEEEECC----CCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHH
Confidence 3456677766 3 689999999642 13479999999999999999999 99999999999999999999999999
Q ss_pred HHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccc
Q 004034 278 ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN 357 (778)
Q Consensus 278 l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 357 (778)
+++|++++|++|.++.+++.++++++++++++++++.. .. +.. .... ++.++.....
T Consensus 113 ~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~----~~~-----~~~~-~~~~~~~~~~---- 169 (560)
T PLN02574 113 LSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENV---------EK----LSP-----LGVP-VIGVPENYDF---- 169 (560)
T ss_pred HHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHH---------HH----HHh-----cCCc-EEecCccccc----
Confidence 99999999999999999999999999999999976531 11 111 1111 2222211000
Q ss_pred ccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHH---HhhCC-CCCcEEE
Q 004034 358 TKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDY-KPSDVYW 433 (778)
Q Consensus 358 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~~-~~~d~~l 433 (778)
.........|.+.+.......+.....++++++|+|||||||.||||+++|++++........ ..+.. ...++++
T Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (560)
T PLN02574 170 -DSKRIEFPKFYELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYL 248 (560)
T ss_pred -ccCccCcccHHHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEE
Confidence 000001112333232222222233456789999999999999999999999996554332211 11222 3468899
Q ss_pred EeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeE
Q 004034 434 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRV 513 (778)
Q Consensus 434 ~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~ 513 (778)
..+|++|..++...++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|.+.... ....++++||.
T Consensus 249 ~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~~~lr~ 323 (560)
T PLN02574 249 AALPMFHIYGLSLFVVGLLSLGSTIVVMRR----FDASDMVKVIDRFKVTHFPVVPPILMALTKKAKG-VCGEVLKSLKQ 323 (560)
T ss_pred EecchHHHHHHHHHHHHHHhcCCEEEEecC----CCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccc-cccCccccceE
Confidence 999999999877777788899999998854 4899999999999999999999999999887532 12356889999
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEEC-CCCceeCCCee
Q 004034 514 LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGECS 592 (778)
Q Consensus 514 v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd-~~g~~~~~g~~ 592 (778)
+++||+++++++++++.+.++ ++++++.||+||++.+.+..........++++|+|+++++++|+| ++|++++.|+.
T Consensus 324 ~~~gg~~l~~~~~~~~~~~~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~ 401 (560)
T PLN02574 324 VSCGAAPLSGKFIQDFVQTLP--HVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNC 401 (560)
T ss_pred EEEecccCCHHHHHHHHHHCC--CCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCC
Confidence 999999999999999998885 478999999999986554322222224567899999999999999 68999999999
Q ss_pred eEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCc
Q 004034 593 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 672 (778)
Q Consensus 593 GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~ 672 (778)
|||+|+| |+++.|||++++.+...+.. +|||+|||+|++|+||+++++||.||+||++|++|++.|||++|.+||+
T Consensus 402 Gei~v~g--~~~~~GY~~~~~~t~~~~~~--~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~ 477 (560)
T PLN02574 402 GELWIQG--PGVMKGYLNNPKATQSTIDK--DGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPE 477 (560)
T ss_pred eEEEEEC--cchhhhhcCChhHhhhhccC--CCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCC
Confidence 9999999 89999999999988777643 7899999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 673 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 673 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
|.|++|++++++..++.+++||+.+++...+ .++|+++++++|++|+.|+.|+++++||+|++|||+|+.|++.+.+
T Consensus 478 V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~ 554 (560)
T PLN02574 478 IIDAAVTAVPDKECGEIPVAFVVRRQGSTLS---QEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTN 554 (560)
T ss_pred cceEEEEccccCCCCcceEEEEEeCCCCCCC---HHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhh
Confidence 9999999999988888999999987655443 4689999999999999999999999999999999999999999864
No 32
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-69 Score=627.38 Aligned_cols=492 Identities=24% Similarity=0.297 Sum_probs=407.6
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+.++|.++++ ++||++|++.. .+++||.||.++++++|++|.++|+++||+|+|+++|++++++++|||+++|
T Consensus 45 ~~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 117 (537)
T PRK13382 45 PTSGFAIAAQ-RCPDRPGLIDE------LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIG 117 (537)
T ss_pred HHHHHHHHHH-hCCCCeEEEeC------CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcC
Confidence 6788999998 89999999975 5789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|++|.++.+++.+++++++++++|+++... ..+....... +....++.+....
T Consensus 118 ~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~---------- 174 (537)
T PRK13382 118 ADILLLNTSFAGPALAEVVTREGVDTVIYDEEFS---------ATVDRALADC----PQATRIVAWTDED---------- 174 (537)
T ss_pred cEEEecCcccCHHHHHHHHHhcCCCEEEEchhhH---------HHHHHHHhhc----cccceEEEecCCc----------
Confidence 9999999999999999999999999999986532 2222222211 2222233222110
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchh
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 441 (778)
....+........... ....++++++++|||||||+||||+++|++++.+ .......+.+..+++++...|++|.
T Consensus 175 --~~~~~~~~~~~~~~~~--~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~~~ 249 (537)
T PRK13382 175 --HDLTVEVLIAAHAGQR--PEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGT-LKAILDRTPWRAEEPTVIVAPMFHA 249 (537)
T ss_pred --ccccHHHHhhccCcCC--CCCCCCCCeEEEECCCCCCCCCEEEeccchHHHH-HHHHHHhhCCCCCCeEEEecChHhh
Confidence 0112222222111111 1234688999999999999999999999885443 3444456778889999999999999
Q ss_pred hhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCC
Q 004034 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (778)
Q Consensus 442 ~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (778)
.++ ..++.++..|+++++... ++++.+++.|+++++|++.++|++++.|++.........++++||.+++|||++
T Consensus 250 ~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l 324 (537)
T PRK13382 250 WGF-SQLVLAASLACTIVTRRR----FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRM 324 (537)
T ss_pred hHH-HHHHHHHhcCcEEEECCC----cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCC
Confidence 885 577889999999988642 589999999999999999999999999987653323344567899999999999
Q ss_pred CHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCC
Q 004034 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 601 (778)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~ 601 (778)
++++++.|.+.++ .++++.||+||++.+.+..... ....++++|+|+++++++|+|+++++++.|+.|||+|+|
T Consensus 325 ~~~~~~~~~~~~~---~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g-- 398 (537)
T PRK13382 325 RPDVVIAFMDQFG---DVIYNNYNATEAGMIATATPAD-LRAAPDTAGRPAEGTEIRILDQDFREVPTGEVGTIFVRN-- 398 (537)
T ss_pred CHHHHHHHHHHcC---CcEEecccccccCcceecChhH-hccCCCCccccCcCcEEEEECCCCCCCCCCCeeEEEEEc--
Confidence 9999999999987 5799999999998765533221 234678999999999999999999999999999999999
Q ss_pred CcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEE
Q 004034 602 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 681 (778)
Q Consensus 602 p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~ 681 (778)
|+++.||+ ++.+.. + .+|||+|||++++++||+++|+||+||+||++|++|+|.|||++|.+||+|.+++|+++
T Consensus 399 ~~~~~gY~--~~~~~~-~---~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~ 472 (537)
T PRK13382 399 DTQFDGYT--SGSTKD-F---HDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGV 472 (537)
T ss_pred CCcccCcc--ccchhh-c---cCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEcc
Confidence 89999998 333332 2 26899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHH
Q 004034 682 EHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 748 (778)
Q Consensus 682 ~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~ 748 (778)
+++..++.++++|++.++.... .++|+++++++|+.|++|..++++++||+|++||++|++|++
T Consensus 473 ~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 473 DDEQYGQRLAAFVVLKPGASAT---PETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred CccccCCEEEEEEEECCCCCCC---HHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 9887889999999987654333 578999999999999999999999999999999999999874
No 33
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=9.4e-69 Score=622.06 Aligned_cols=505 Identities=24% Similarity=0.355 Sum_probs=418.3
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
.+.+++.++++ ++||++|+++.. .++++||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++
T Consensus 24 ~~~~~l~~~~~-~~~~~~a~~~~~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~ 98 (537)
T PLN02246 24 PLHDYCFERLS-EFSDRPCLIDGA----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRR 98 (537)
T ss_pred cHHHHHHHHHH-hCCCCeEEEecC----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 36677888887 799999998642 2478999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++..++++++++++|+++... ..+.+.... ..+ .++.++...
T Consensus 99 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~-----~~~-~~i~~~~~~--------- 154 (537)
T PLN02246 99 GAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYV---------DKLKGLAED-----DGV-TVVTIDDPP--------- 154 (537)
T ss_pred CEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHHHHhhc-----CCc-eEEEeCCCC---------
Confidence 99999999999999999999999999999976542 112221110 122 233333211
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHH---HhhCCCCCcEEEEeCC
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDYKPSDVYWCTAD 437 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~~~~~d~~l~~~~ 437 (778)
.....+.+.........+.....++++++|+|||||||.||||+++|++++.+...... ..+++.++|++++.+|
T Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p 232 (537)
T PLN02246 155 --EGCLHFSELTQADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLP 232 (537)
T ss_pred --CCceeHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeec
Confidence 00111222222222222334456899999999999999999999999996655443221 2467889999999999
Q ss_pred cchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEe
Q 004034 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 517 (778)
Q Consensus 438 ~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~g 517 (778)
++|..++...++.++..|+++++.+. .++..+++.|+++++|++.++|+++..|.+... ....+++++|.+++|
T Consensus 233 l~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~g 306 (537)
T PLN02246 233 MFHIYSLNSVLLCGLRVGAAILIMPK----FEIGALLELIQRHKVTIAPFVPPIVLAIAKSPV--VEKYDLSSIRMVLSG 306 (537)
T ss_pred hHHHHHHHHHHHHHHhcCCEEEEeCC----CCHHHHHHHHHHhCceEEEcchHHHHHHhcCcc--ccccCccceeEEEEe
Confidence 99998876778889999999999864 478999999999999999999999999987643 223467899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCC---CCCCCCCCCcCcCcCCceEEEECC-CCceeCCCeee
Q 004034 518 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP---GAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSG 593 (778)
Q Consensus 518 Ge~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~---~~~~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~G 593 (778)
|+++++++.+++.+.++ ++.+++.||+||++.+++.... .....+++++|+|+++++++|+|+ ++++++.|+.|
T Consensus 307 g~~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~G 384 (537)
T PLN02246 307 AAPLGKELEDAFRAKLP--NAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPG 384 (537)
T ss_pred cCcCCHHHHHHHHHHcC--CCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCce
Confidence 99999999999999886 4789999999999865432211 112245678999999999999995 78999999999
Q ss_pred EEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCcc
Q 004034 594 YLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQC 673 (778)
Q Consensus 594 EL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V 673 (778)
||+|+| +.++.||+++++.+...+.. +|||+|||++++++||+++++||.||+||++|+||+|.|||++|.+||+|
T Consensus 385 el~v~g--~~~~~GY~~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v 460 (537)
T PLN02246 385 EICIRG--PQIMKGYLNDPEATANTIDK--DGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSI 460 (537)
T ss_pred EEEEEC--CchhccccCCchhhhhcccC--CCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCe
Confidence 999999 89999999999888776533 68999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 674 AEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 674 ~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
.+++|++++++..++.++++|+..++...+ .++|+++++++|++|++|..|+++++||+|++||++|++|++++.
T Consensus 461 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~ 535 (537)
T PLN02246 461 ADAAVVPMKDEVAGEVPVAFVVRSNGSEIT---EDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLA 535 (537)
T ss_pred eEEEEEcccCccCCceeEEEEEeCCCCCCC---HHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHh
Confidence 999999998888888999999987665433 578999999999999999999999999999999999999999875
No 34
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-68 Score=618.86 Aligned_cols=518 Identities=20% Similarity=0.239 Sum_probs=417.0
Q ss_pred ccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHH
Q 004034 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (778)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~v 271 (778)
+|++....+++.++|+++++ ++|+++|+++.+ ..+.+||+||+++++++|++|.++|+++||+|+|+++|+++++
T Consensus 8 ~~~~~~~~~~l~~~l~~~a~-~~p~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~ 82 (534)
T PRK05852 8 APMASDFGPRIADLVEVAAT-RLPEAPALVVTA----DRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFV 82 (534)
T ss_pred cchhhhhcccHHHHHHHHHH-hCCCCcEEEecC----CCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHH
Confidence 56666667789999999998 899999998753 2468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCC
Q 004034 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (778)
Q Consensus 272 va~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 351 (778)
+++|||+++|++++|++|.++.+++.++|++++++++|+++....... .... ......+.+....
T Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~---------~~~~------~~~~~~~~~~~~~ 147 (534)
T PRK05852 83 VALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA---------EPTT------RWWPLTVNVGGDS 147 (534)
T ss_pred HHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc---------cccc------cccceeeeecccc
Confidence 999999999999999999999999999999999999998764321000 0000 0011111111110
Q ss_pred ccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcE
Q 004034 352 AMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 431 (778)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~ 431 (778)
... ...+ ...+...... ..........++++++|+|||||||.||||+++|+++. .........+++.++|+
T Consensus 148 ~~~--~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~-~~~~~~~~~~~~~~~d~ 219 (534)
T PRK05852 148 GPS--GGTL----SVHLDAATEP-TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIA-SSVRAIITGYRLSPRDA 219 (534)
T ss_pred ccc--cccc----ccccccccCC-CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHH-HHHHHHHHHhCCCCcce
Confidence 000 0000 0001111110 00001111225788999999999999999999999965 44444556778999999
Q ss_pred EEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCce
Q 004034 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSL 511 (778)
Q Consensus 432 ~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sL 511 (778)
+++.+|+.|..++...++.+|..|+++++... ..+++..+++.|+++++|+++++|++++.|.+.........+++++
T Consensus 220 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~--~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l 297 (534)
T PRK05852 220 TVAVMPLYHGHGLIAALLATLASGGAVLLPAR--GRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAAL 297 (534)
T ss_pred EEEecCcchhHHHHHHHHHHHhcCCeEEeCCC--cCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCe
Confidence 99999999999988888999999999888543 2347889999999999999999999999998865432223457899
Q ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCC------CCCCCCCCcCcCcCCceEEEECCCCc
Q 004034 512 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------AWPQKPGSATFPFFGVQPVIVDEKGV 585 (778)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~------~~~~~~~~~G~p~~g~~~~Ivd~~g~ 585 (778)
|.++++|+++++++++++.+.++ +++++.||+||++..++..... ......+..|. .+|++++|+|++|+
T Consensus 298 r~i~~~G~~~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~~g~ 373 (534)
T PRK05852 298 RFIRSCSAPLTAETAQALQTEFA---APVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGSDGL 373 (534)
T ss_pred eEEEECCCCCCHHHHHHHHHHhC---CChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECCCCC
Confidence 99999999999999999999887 6899999999998754432111 00112334444 79999999999999
Q ss_pred eeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHH
Q 004034 586 EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVES 665 (778)
Q Consensus 586 ~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~ 665 (778)
+++.|+.|||+|+| +.+++|||++++.+.+.|. +|||+|||++++|+||++++.||.||+||++|.+|+|.|||+
T Consensus 374 ~~~~g~~Gel~v~g--~~v~~gY~~~~~~t~~~~~---~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~ 448 (534)
T PRK05852 374 PLPAGAVGEVWLRG--TTVVRGYLGDPTITAANFT---DGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEG 448 (534)
T ss_pred CCCCCCceEEEEec--CcccchhcCCcccchhhhc---CCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHH
Confidence 99999999999999 8999999999998877653 689999999999999999999999999999999999999999
Q ss_pred HHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHH
Q 004034 666 ALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRI 745 (778)
Q Consensus 666 ~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~ 745 (778)
+|.+||+|.+|+|++++++..++.++++|+..+....+ .++|+++++++||.|++|..|+++++||+|++||++|++
T Consensus 449 ~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~---~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~ 525 (534)
T PRK05852 449 VLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPPT---AEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRA 525 (534)
T ss_pred HHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCCC---HHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHH
Confidence 99999999999999999888889999999986654333 578999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 004034 746 LRKIAS 751 (778)
Q Consensus 746 L~~~~~ 751 (778)
|++.+.
T Consensus 526 L~~~~~ 531 (534)
T PRK05852 526 VAEQFG 531 (534)
T ss_pred HHHHhc
Confidence 999875
No 35
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.9e-69 Score=638.50 Aligned_cols=529 Identities=18% Similarity=0.242 Sum_probs=400.8
Q ss_pred ccHHHHHHHHhhhccCCCeEEEEEEcC---CCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHH
Q 004034 199 TNICYNCLDRNIEAGLGDKVAIYWEAN---DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAML 275 (778)
Q Consensus 199 ~n~~~~~l~~~~~~~~pd~~Al~~~~~---~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~L 275 (778)
++++.++|+++++ ++||++|+.+... ..+..+.+||+||+++++++|++|+++|+++||+|+|+++|++|+++++|
T Consensus 44 ~~t~~~~l~~~a~-~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~l 122 (666)
T PLN02614 44 MDSCWDVFRMSVE-KYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISME 122 (666)
T ss_pred CCcHHHHHHHHHH-hCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3468899999998 8999999986421 11223568999999999999999999999999999999999999999999
Q ss_pred HHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccc
Q 004034 276 ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 355 (778)
Q Consensus 276 A~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 355 (778)
||+++|+++||++|.++.+++.++|++++++++|++++. +......+......++.++.++.......
T Consensus 123 A~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~------------~~~~~~~~~~~~~~l~~vi~~~~~~~~~~ 190 (666)
T PLN02614 123 ACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKK------------ISELFKTCPNSTEYMKTVVSFGGVSREQK 190 (666)
T ss_pred HHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHH------------HHHHHHhcccccccceEEEEeCCCChHHh
Confidence 999999999999999999999999999999999997542 11111111100122455565543210000
Q ss_pred ccccCCCCcccchhhccCCCC-CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHh-----hCCCCC
Q 004034 356 ENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA-----FDYKPS 429 (778)
Q Consensus 356 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~-----~~~~~~ 429 (778)
............|.+.+.... ...+.....++|+++|+|||||||.||||+++|+|++.+... .... .++.++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~-~~~~~~~~~~~~~~~ 269 (666)
T PLN02614 191 EEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAG-VIRLLKSANAALTVK 269 (666)
T ss_pred hhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHH-HHhhccccccCCCCC
Confidence 000000000123444332211 111122346899999999999999999999999996554332 2222 257789
Q ss_pred cEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccc------
Q 004034 430 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV------ 503 (778)
Q Consensus 430 d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~------ 503 (778)
|++++++|++|+++.. ..+..+..|+++++.+ +++..+++.|+++++|+++++|++++.|........
T Consensus 270 d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~ 343 (666)
T PLN02614 270 DVYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR-----GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFL 343 (666)
T ss_pred cEEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHH
Confidence 9999999999998864 3456788999998874 378999999999999999999999998864210000
Q ss_pred -----------------------cc-------------CCC-CceeEEEEecCCCCHHHHHHHHHHhCCCCcceeccccc
Q 004034 504 -----------------------TR-------------YSR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQ 546 (778)
Q Consensus 504 -----------------------~~-------------~~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~ 546 (778)
.. ..+ ++||.+++||+++++++ +.|.+.++ ++++++.||+
T Consensus 344 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~--~~~i~~~YG~ 420 (666)
T PLN02614 344 KKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVA--CCHVLQGYGL 420 (666)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhc--CCCEEeeCch
Confidence 00 011 68999999999999875 55666665 3789999999
Q ss_pred ccccceecccCCCCCCCCCCCcCcCcCCceEEEEC-CC--CceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCC
Q 004034 547 TETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EK--GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 623 (778)
Q Consensus 547 TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd-~~--g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~ 623 (778)
||+++..+...+.. ..+++++|+|++|++++|+| ++ +++++.|+.|||+|+| |++++|||++++.+.+.|.
T Consensus 421 TE~~~~~~~~~~~~-~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrG--p~v~~GY~~~pe~T~~~f~--- 494 (666)
T PLN02614 421 TESCAGTFVSLPDE-LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRG--KTLFSGYYKREDLTKEVLI--- 494 (666)
T ss_pred Hhhhhheeeecccc-CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcC--CcccccccCCHHHhhhhhc---
Confidence 99986544333322 23568999999999999997 33 4789999999999999 8999999999999988762
Q ss_pred CCeEEcCcEEEEecCCeEEEEeecCCEEEe-CceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCC--
Q 004034 624 PGYYFTGDGCSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV-- 700 (778)
Q Consensus 624 ~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki-~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~-- 700 (778)
+|||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|++..+ ...++|+|++....
T Consensus 495 dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~---~~~l~alvv~~~~~~~ 571 (666)
T PLN02614 495 DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSF---ESFLVAIANPNQQILE 571 (666)
T ss_pred cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCC---cceEEEEEeCCHHHHH
Confidence 799999999999999999999999999998 599999999999999999999999998642 23699999876421
Q ss_pred --------C-------CCHHHHHHHHHHH-----HhhcCCCccccEEEECCC-C-----CCCCCCcccHHHHHHHHhccc
Q 004034 701 --------P-------YSEELRKSLVLAV-----RKQIGAFAAPDKIHWAPG-L-----PKTRSGKIMRRILRKIASRQL 754 (778)
Q Consensus 701 --------~-------~~~~l~~~l~~~l-----~~~Lp~~~~P~~i~~v~~-l-----P~T~sGKi~R~~L~~~~~~~~ 754 (778)
. ..+++.+.|.+.+ ++.|+.|.+++.|+++++ | -+|+++|+.|+.+.+.+..++
T Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i 651 (666)
T PLN02614 572 RWAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVI 651 (666)
T ss_pred HHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHH
Confidence 0 0122334444443 356999999999998874 4 389999999999999999888
Q ss_pred CcCCC
Q 004034 755 DELGD 759 (778)
Q Consensus 755 ~~~~~ 759 (778)
++++.
T Consensus 652 ~~ly~ 656 (666)
T PLN02614 652 DEMYK 656 (666)
T ss_pred HHHHH
Confidence 87763
No 36
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-68 Score=621.73 Aligned_cols=514 Identities=21% Similarity=0.327 Sum_probs=413.8
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
++.++|+++++ .+|+++|++.. ++.+||+||+++++++|+.|.+ .|+++||+|+|+++|++++++++|||++
T Consensus 25 ~~~~~l~~~a~-~~p~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~ 97 (562)
T PRK05677 25 NIQAVLKQSCQ-RFADKPAFSNL------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMR 97 (562)
T ss_pred cHHHHHHHHHH-hCCCCeeEEEC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 47788988888 89999999975 5789999999999999999997 6999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccc--
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN-- 357 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-- 357 (778)
+|++++|++|.++.+++.+++++++++++|+++... ..+.+.... ..++.++..+.........
T Consensus 98 ~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 163 (562)
T PRK05677 98 AGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMA---------HLAEKVLPK-----TGVKHVIVTEVADMLPPLKRL 163 (562)
T ss_pred cCeEEeecCCCCCHHHHHHHHhccCceEEEEecchh---------hhHHHhhhc-----cCcceeEEecccccccchhhh
Confidence 999999999999999999999999999999876432 111111111 1222222211100000000
Q ss_pred ------------c-cCCCCcccchhhccCCCC-CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHh
Q 004034 358 ------------T-KWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 423 (778)
Q Consensus 358 ------------~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~ 423 (778)
. .........+.+.+.... ...+.....++++++|+|||||||+||||+++|++++.+.. .....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~-~~~~~ 242 (562)
T PRK05677 164 LINAVVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANML-QCRAL 242 (562)
T ss_pred hcccchhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHH-HHHHH
Confidence 0 000001112222222111 11122335679999999999999999999999999655433 23323
Q ss_pred h--CCCC-CcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCC
Q 004034 424 F--DYKP-SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN 500 (778)
Q Consensus 424 ~--~~~~-~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~ 500 (778)
+ .+.. .+++++..|+.|..++.+.++.++..|++.++.+.. .++..+++.|+++++|+++.+|+++..|.....
T Consensus 243 ~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 319 (562)
T PRK05677 243 MGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNP---RDLPAMVKELGKWKFSGFVGLNTLFVALCNNEA 319 (562)
T ss_pred hccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCc---ccHHHHHHHHHHcCceEEecHHHHHHHHHhCcc
Confidence 3 2343 468899999999998777788888999988777542 478999999999999999999999999987543
Q ss_pred cccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEE
Q 004034 501 EYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV 580 (778)
Q Consensus 501 ~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Iv 580 (778)
....+++++|.+++||+++++++++++.+.++ +++++.||+||++.+....... ...++++|+|+++++++|+
T Consensus 320 --~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~ 392 (562)
T PRK05677 320 --FRKLDFSALKLTLSGGMALQLATAERWKEVTG---CAICEGYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVI 392 (562)
T ss_pred --cccCChhhceEEEEcCccCCHHHHHHHHHHcC---CCeeccCCccccCcceeecCcc--CCCCCccCccCCCCEEEEE
Confidence 22345679999999999999999999999876 7899999999998765543222 2456789999999999999
Q ss_pred CCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCH
Q 004034 581 DEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGT 660 (778)
Q Consensus 581 d~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~ 660 (778)
|+++++++.|+.|||+|+| |.+++||+++++.+...|.. +|||+|||+|++|+||+++|.||.||+||++|++|+|
T Consensus 393 d~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~--~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p 468 (562)
T PRK05677 393 DDDGNELPLGEVGELCVKG--PQVMKGYWQRPEATDEILDS--DGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYP 468 (562)
T ss_pred CCCCCCCCCCCCeEEEEec--CccchhhcCCchhhhhccCC--CCcccccceEEECCCCcEEEEecCcCeEEeCCEEECH
Confidence 9999999999999999999 89999999999988877643 6899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCc
Q 004034 661 AEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGK 740 (778)
Q Consensus 661 ~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGK 740 (778)
.|||++|.+||+|.+++|++++++..++.++++|+++++...+ .++|+++++++|++|++|..|+++++||+|+|||
T Consensus 469 ~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK 545 (562)
T PRK05677 469 NELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLT---KEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGK 545 (562)
T ss_pred HHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCCC---HHHHHHHHHHhhhhccCCcEEEEeccCCCCCccc
Confidence 9999999999999999999999988889999999987654433 5789999999999999999999999999999999
Q ss_pred ccHHHHHHHHhcc
Q 004034 741 IMRRILRKIASRQ 753 (778)
Q Consensus 741 i~R~~L~~~~~~~ 753 (778)
++|++|+++..++
T Consensus 546 i~r~~L~~~~~~~ 558 (562)
T PRK05677 546 ILRRELRDEELKK 558 (562)
T ss_pred ccHHHHHHHHHHh
Confidence 9999999876544
No 37
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.7e-68 Score=612.50 Aligned_cols=506 Identities=24% Similarity=0.347 Sum_probs=425.1
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.+.|+++++ .+|+++|+++. ++++||+||++++.++|+.|++.|+++||+|+++++|++++++++|||+++
T Consensus 6 ~i~~~l~~~~~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~ 78 (513)
T PRK07656 6 TLPELLARAAR-RFGDKEAYVFG------DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKA 78 (513)
T ss_pred cHHHHHHHHHH-HCCCCeEEEeC------CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 57788999888 89999999986 688999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++..++++++++++++++... .........+ ...+.++....... ..
T Consensus 79 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~~- 139 (513)
T PRK07656 79 GAVVVPLNTRYTADEAAYILARGDAKALFVLGLFL---------GVDYSATTRL----PALEHVVICETEED-----DP- 139 (513)
T ss_pred CeEEEecCcccCHHHHHHHHhhcCceEEEEchhhH---------HHHHHHHhcc----CCccEEEEEcCccc-----cc-
Confidence 99999999999999999999999999999987642 1112221222 33444444433221 00
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
.......|.+.+.......+.....++++++|+|||||||.||+|.++|++++ .....+...+++.++|++++..|++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (513)
T PRK07656 140 HTEKMKTFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLL-SNAADWAEYLGLTEGDRYLAANPFFH 218 (513)
T ss_pred CccccccHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHH-HHHHHHHHhhCCCCCCeEEEccchHH
Confidence 01122334444433322223345678999999999999999999999999954 44455566788999999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
++++...++.+|..|+++++... .++..+++.|+++++|++.++|++++.|.+.... ....++++|.+++||++
T Consensus 219 ~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~l~~v~~~g~~ 292 (513)
T PRK07656 219 VFGYKAGVNAPLMRGATILPLPV----FDPDEVFRLIETERITVLPGPPTMYNSLLQHPDR--SAEDLSSLRLAVTGAAS 292 (513)
T ss_pred HHHHHHHHHHHHHcCceEEecCc----CCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCc--CCCCccceeeEEecCCC
Confidence 99988888999999999988643 4899999999999999999999999999987642 23467899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC-CCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEec
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~-~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g 599 (778)
+++++++++.+.++. .++++.||+||++++........ ....++++|+|+++++++|+|+++++++.|+.|||+|+|
T Consensus 293 ~~~~~~~~~~~~~~~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~ 370 (513)
T PRK07656 293 MPVALLERFESELGV--DIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEVGELLVRG 370 (513)
T ss_pred CCHHHHHHHHHHcCC--CceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCceEEEEEc
Confidence 999999999998872 27999999999987665443222 112367899999999999999999999999999999999
Q ss_pred CCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEE
Q 004034 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 679 (778)
Q Consensus 600 ~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv 679 (778)
+.++.||+++++.+...+. .+|||+|||+|++++||.++++||.||+||++|.+|+|.|||++|.+||+|.+++|+
T Consensus 371 --~~~~~gy~~~~~~~~~~~~--~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 446 (513)
T PRK07656 371 --PNVMKGYYDDPEATAAAID--ADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVI 446 (513)
T ss_pred --chhhhhhcCCHHHHhhhhc--cCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEE
Confidence 8999999999887766553 268999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHH
Q 004034 680 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 748 (778)
Q Consensus 680 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~ 748 (778)
+.+++..++.+++||+.+++...+ .++|++++++.||++++|..|+++++||+|++||++|+.|++
T Consensus 447 ~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 447 GVPDERLGEVGKAYVVLKPGAELT---EEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred ecCCcccCceEEEEEEECCCCCCC---HHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 999887888999999987644433 468999999999999999999999999999999999999975
No 38
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.1e-68 Score=618.06 Aligned_cols=515 Identities=24% Similarity=0.355 Sum_probs=422.1
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~-Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
++.++|.++++ ++|+++|+++. ++++||+||.++++++|..|++. |+++||+|+|+++|++++++++|||++
T Consensus 11 tl~~~l~~~a~-~~~~~~a~~~~------~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 83 (546)
T PRK08314 11 SLFHNLEVSAR-RYPDKTAIVFY------GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILR 83 (546)
T ss_pred CHHHHHHHHHH-HcCCCcceeec------CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 47788888888 89999999987 57899999999999999999999 999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccc----
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR---- 355 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---- 355 (778)
+|++++|++|.++.+++.+++++++++++|+++.... .+......+ .+..+++.........
T Consensus 84 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 149 (546)
T PRK08314 84 ANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAP---------KVAPAVGNL-----RLRHVIVAQYSDYLPAEPEI 149 (546)
T ss_pred cCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhh---------hHHHHhhcc-----CcceEEEecchhhccccccc
Confidence 9999999999999999999999999999999875421 111111111 1222322211000000
Q ss_pred c----------cccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC
Q 004034 356 E----------NTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (778)
Q Consensus 356 ~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (778)
. ...........|.+.+.... ..+.....++++++|+|||||||.||||+++|++++.+.. .....++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~-~~~~~~~ 227 (546)
T PRK08314 150 AVPAWLRAEPPLQALAPGGVVAWKEALAAGL-APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAV-GSVLWSN 227 (546)
T ss_pred CcccccccccccccccccccccHHHHhcccC-CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHH-HHHHhhC
Confidence 0 00000112223444333211 1223345789999999999999999999999999765544 3455678
Q ss_pred CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccccc
Q 004034 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (778)
Q Consensus 426 ~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~ 505 (778)
+.++|++++.+|++|..|+.+.++.+|.+|+++++.+. +++..+++.++++++|++.++|++++.++.... ...
T Consensus 228 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~--~~~ 301 (546)
T PRK08314 228 STPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPR----WDREAAARLIERYRVTHWTNIPTMVVDFLASPG--LAE 301 (546)
T ss_pred CCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCC----CCHHHHHHHHHHhcCceecccHHHHHHHHhCCC--ccc
Confidence 89999999999999999988888999999999999864 488999999999999999999999999887643 234
Q ss_pred CCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECC-CC
Q 004034 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KG 584 (778)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~-~g 584 (778)
.+++++|.+++||+++++++++++.+.++ +++++.||+||++......... ....+++|+|++|++++|+|+ ++
T Consensus 302 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~ 376 (546)
T PRK08314 302 RDLSSLRYIGGGGAAMPEAVAERLKELTG---LDYVEGYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETL 376 (546)
T ss_pred cCchhhheeeeccccCCHHHHHHHHHHcC---CcEEecccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCC
Confidence 56789999999999999999999999886 6899999999998765433222 134578999999999999995 78
Q ss_pred ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC-CCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHH
Q 004034 585 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEV 663 (778)
Q Consensus 585 ~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~-~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eI 663 (778)
++++.|+.|||+|+| ++++.||+++++.+...|.. +..+||+|||+|+++++|+++++||.||+||++|++|+|.||
T Consensus 377 ~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eI 454 (546)
T PRK08314 377 EELPPGEVGEIVVHG--PQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEV 454 (546)
T ss_pred cCCCCCCceEEEEEC--CchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHH
Confidence 999999999999999 89999999999887776643 223599999999999999999999999999999999999999
Q ss_pred HHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccH
Q 004034 664 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMR 743 (778)
Q Consensus 664 E~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R 743 (778)
|++|.+||+|.+++|++.++...++.+++||+++++.... ...++|+++++++|++|++|..|+++++||+|.+||++|
T Consensus 455 E~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~-~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r 533 (546)
T PRK08314 455 ENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARGK-TTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILW 533 (546)
T ss_pred HHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCCC-CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeH
Confidence 9999999999999999999988889999999987654321 114789999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 004034 744 RILRKIASR 752 (778)
Q Consensus 744 ~~L~~~~~~ 752 (778)
+.|++...+
T Consensus 534 ~~L~~~~~~ 542 (546)
T PRK08314 534 RQLQEQEKA 542 (546)
T ss_pred HHHHHHHhh
Confidence 999987653
No 39
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.1e-67 Score=613.33 Aligned_cols=506 Identities=24% Similarity=0.335 Sum_probs=414.2
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ .+|+++|+++.++..+..+.+||+||+++++++|.+|+++|+++||+|+++++|++++++++|||+++
T Consensus 23 ~~~~~~~~~~~-~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 23 TINDHFDAAVA-NCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred cHHHHHHHHHH-HCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 46788999998 89999999874332233678999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++.+++++++++++++++... .+.......+....+ +....++.++....
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 165 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFR----GFDHAAMARELQSKL----PALRQVVVIDGDGD-------- 165 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEccccc----cccHHHHHHHHhccC----CcceEEEEecCCCC--------
Confidence 99999999999999999999999999999987542 111112222221111 23344554432210
Q ss_pred CCCcccchhhccCCC-----CC---CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEE
Q 004034 361 QDGRDIWWQDVVPKY-----PT---KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 432 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~-----~~---~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~ 432 (778)
..|.+.+... +. ........++++++|+|||||||.||||+++|++++.. .......+++..+|++
T Consensus 166 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~-~~~~~~~~~~~~~d~~ 239 (538)
T TIGR03208 166 -----DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSN-IHPYAERLELGGGDVI 239 (538)
T ss_pred -----cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHH-HHHHHhhcCCCCCCeE
Confidence 0111111100 00 01112356799999999999999999999999995544 4444556788889999
Q ss_pred EEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCcee
Q 004034 433 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 512 (778)
Q Consensus 433 l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr 512 (778)
++.+|++|..++.+.++.++..|+++++.+. +++..+++.++++++|++.++|+++..+...... ...+++++|
T Consensus 240 l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~--~~~~~~~l~ 313 (538)
T TIGR03208 240 LMASPMAHQTGFMYGLMMPLILNATAVLQDI----WNPARAAELIRETGVTFTMASTPFLTDLCRAVKE--SGAPVPSLF 313 (538)
T ss_pred EEeCCchhHHHHHHHHHHHHHcCCEEEecCc----cCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhc--cCCCCCcce
Confidence 9999999998888888999999999998743 4899999999999999999999999988765421 234678999
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCee
Q 004034 513 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECS 592 (778)
Q Consensus 513 ~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~ 592 (778)
.+++||+++++++++++.+.++ +++++.||+||++.+.+............++|+|++|++++|+|+++++++.|+.
T Consensus 314 ~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~ 390 (538)
T TIGR03208 314 TFLCAGAPIPGILVERAWELLG---ALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGET 390 (538)
T ss_pred EEEEcCCCCCHHHHHHHHHHcC---CeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCC
Confidence 9999999999999999998886 7899999999998765433222112234678999999999999999999999999
Q ss_pred eEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCc
Q 004034 593 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 672 (778)
Q Consensus 593 GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~ 672 (778)
|||+|+| +.++.||+++++.+.. ..+|||+|||+|++|+||+++++||.||+||++|++|+|.|||++|.+||+
T Consensus 391 Gel~v~g--~~~~~gy~~~~~~~~~----~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~ 464 (538)
T TIGR03208 391 GRLLVRG--CSNFGGYLKRPHLNST----DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPA 464 (538)
T ss_pred cEEEEec--CcccccccCCcccccc----cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcc
Confidence 9999999 8899999999876532 247899999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHh-hcCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 673 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 673 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~-~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
|.+++|++.++...++.+.++|++.++...+ .+++++++++ +++.|++|..|+++++||+|++||++|++|+
T Consensus 465 v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 465 VAQVAIVAYPDERLGERACAVVVPKPGCTLD---FAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred eeeEEEEeccCCCCCceEEEEEEECCCCCCC---HHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 9999999999887889999999997665443 4678888985 7999999999999999999999999999986
No 40
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-67 Score=605.24 Aligned_cols=490 Identities=22% Similarity=0.300 Sum_probs=412.6
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
+.+.|+++++ .+||++|+++. ++.+||+||+++++++|+.|++ .|+++||+|+++++|++++++++|||+++
T Consensus 4 ~~~~~~~~a~-~~p~~~a~~~~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 76 (496)
T PRK06839 4 IAYWIEKRAY-LHPDRIAIITE------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKV 76 (496)
T ss_pred HHHHHHHHHH-HCCCCeEEEEC------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 4567889998 89999999976 6899999999999999999985 79999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++.+++++++++++++++... ..+.+.... .....++.+.+.
T Consensus 77 G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~---------- 132 (496)
T PRK06839 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQ---------NMALSMQKV-----SYVQRVISITSL---------- 132 (496)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHH---------HHHHHhhhc-----cCcceEEEecch----------
Confidence 99999999999999999999999999999976532 111111111 112223332211
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
.+...... .+.....++++++|+|||||||.||+|+++|.+++.+.. .....+++.++|++++.+|+.|
T Consensus 133 --------~~~~~~~~--~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~-~~~~~~~~~~~d~~l~~~p~~~ 201 (496)
T PRK06839 133 --------KEIEDRKI--DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNAL-NNTFAIDLTMHDRSIVLLPLFH 201 (496)
T ss_pred --------HhhhccCC--CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHH-HHHHHcCCCCCCeEEEeeCCcc
Confidence 11111111 112234568999999999999999999999999644333 3344568889999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
..+....++.++..|+++++.+. .+++.+++.++++++|++.++|++++.|++... ....+++++|.+++||++
T Consensus 202 ~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gG~~ 275 (496)
T PRK06839 202 IGGIGLFAFPTLFAGGVIIVPRK----FEPTKALSMIEKHKVTVVMGVPTIHQALINCSK--FETTNLQSVRWFYNGGAP 275 (496)
T ss_pred hhhHHHHHHHHHhcCcEEEEccC----CCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcc--cccCCCcccceEEECCCC
Confidence 99877777889999999988653 489999999999999999999999999988754 233567899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecC
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~ 600 (778)
+++++++++.+. + +++.+.||+||++.+.+.........+.+++|+|+++++++|+|+++++++.|+.|||+|+|
T Consensus 276 ~~~~~~~~~~~~-g---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~Gel~v~~- 350 (496)
T PRK06839 276 CPEELMREFIDR-G---FLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEVGELLIRG- 350 (496)
T ss_pred CCHHHHHHHHHh-C---CeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCceEEEEEC-
Confidence 999999998875 4 78999999999987544332222234678899999999999999999999999999999999
Q ss_pred CCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEE
Q 004034 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVG 680 (778)
Q Consensus 601 ~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 680 (778)
|.++.||+++++.+...+ .+|||+|||++++++||++++.||.||+||.+|.+|+|.|||++|.+||+|.+++|++
T Consensus 351 -~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 426 (496)
T PRK06839 351 -PNVMKEYWNRPDATEETI---QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG 426 (496)
T ss_pred -CCcchhhcCChHHHHHHH---cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 899999999998776554 2689999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 681 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 681 ~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
++++..++.++++|+++++...+ .++|++++++.|+.+++|..|++++++|+|.+||++|++|+++..
T Consensus 427 ~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~ 494 (496)
T PRK06839 427 RQHVKWGEIPIAFIVKKSSSVLI---EKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLK 494 (496)
T ss_pred ccccccCceEEEEEEECCCCCCC---HHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhh
Confidence 99988889999999998765443 478999999999999999999999999999999999999998875
No 41
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-67 Score=612.98 Aligned_cols=519 Identities=22% Similarity=0.290 Sum_probs=424.2
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
+++++|+++++ ++|+++|+++.+ .++.+||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 19 ~l~~~l~~~~~-~~p~~~a~~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~ 93 (558)
T PRK12583 19 TIGDAFDATVA-RFPDREALVVRH----QALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARI 93 (558)
T ss_pred cHHHHHHHHHH-HCCCCeEEEecC----CCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhh
Confidence 58899999998 899999999853 2578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhh---------cCCCccEEEEEccCC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK---------SGISVDVCLTYENQS 351 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~vi~~~~~~ 351 (778)
|++++|+++.++.+++.+++++++++++|+.+....... ...+.+....+.. ..+.+..++..+...
T Consensus 94 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
T PRK12583 94 GAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDY----HAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP 169 (558)
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccch----hHHHHHHhhhhccccccccccccCCcceEEEEecCCC
Confidence 999999999999999999999999999999876432111 1111111111100 001222233222111
Q ss_pred ccccccccCCCCcccchhhccCCCC------CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC
Q 004034 352 AMTRENTKWQDGRDIWWQDVVPKYP------TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (778)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (778)
. .....|.+...... .........++++++++|||||||.||||+++|++++. ........++
T Consensus 170 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~-~~~~~~~~~~ 238 (558)
T PRK12583 170 P----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILN-NGYFVAESLG 238 (558)
T ss_pred C----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHH-HHHHHHHHhC
Confidence 0 00111222211110 11112234678999999999999999999999999644 4444556688
Q ss_pred CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccccc
Q 004034 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (778)
Q Consensus 426 ~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~ 505 (778)
+.++|++++..|++|..|..+.++.++..|+++++.... .++..+++.++++++|++..+|+++..++.... ...
T Consensus 239 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~--~~~ 313 (558)
T PRK12583 239 LTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEA---FDPLATLQAVEEERCTALYGVPTMFIAELDHPQ--RGN 313 (558)
T ss_pred CCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCC---CCHHHHHHHHHHcCCeEEeccHHHHHHHHcccc--ccC
Confidence 999999999999999999888899999999999876432 488999999999999999999999988886643 233
Q ss_pred CCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCC-CCCCCCCCcCcCcCCceEEEECCCC
Q 004034 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG-AWPQKPGSATFPFFGVQPVIVDEKG 584 (778)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~-~~~~~~~~~G~p~~g~~~~Ivd~~g 584 (778)
.++++||.+++||+++++++++++.+.++ ...+++.||+||++.+.+..... ....++.++|+|++++.++|+|+++
T Consensus 314 ~~~~~lr~i~~~G~~~~~~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~ 391 (558)
T PRK12583 314 FDLSSLRTGIMAGAPCPIEVMRRVMDEMH--MAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDG 391 (558)
T ss_pred CCchhheEEEecCCCCCHHHHHHHHHHcC--CcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCC
Confidence 56889999999999999999999999887 35799999999999865543221 1223567899999999999999999
Q ss_pred ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHH
Q 004034 585 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVE 664 (778)
Q Consensus 585 ~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE 664 (778)
++++.|+.|||+|+| +.++.||+++++.+...+.. +|||+|||++++++||++++.||.||+||++|.+|+|.|||
T Consensus 392 ~~~~~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~~~--~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE 467 (558)
T PRK12583 392 ATVPRGEIGELCTRG--YSVMKGYWNNPEATAESIDE--DGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIE 467 (558)
T ss_pred CCCCCCCeeEEEEEe--CccchhhcCChHHHHhhcCC--CCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHH
Confidence 999999999999999 89999999999887766533 68999999999999999999999999999999999999999
Q ss_pred HHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHH
Q 004034 665 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 744 (778)
Q Consensus 665 ~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~ 744 (778)
++|.+||+|.+++|++++++..++.++++|+..++...+ .++|+.+++++||.|++|..++++++||+|++||++|+
T Consensus 468 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~ 544 (558)
T PRK12583 468 EFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAAS---EEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKF 544 (558)
T ss_pred HHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCCC---HHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHH
Confidence 999999999999999999887788999999987654433 57899999999999999999999999999999999999
Q ss_pred HHHHHHhcc
Q 004034 745 ILRKIASRQ 753 (778)
Q Consensus 745 ~L~~~~~~~ 753 (778)
.|+++...+
T Consensus 545 ~L~~~~~~~ 553 (558)
T PRK12583 545 RMREISIEE 553 (558)
T ss_pred HHHHHHHhh
Confidence 999997654
No 42
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-68 Score=616.17 Aligned_cols=507 Identities=21% Similarity=0.282 Sum_probs=402.4
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
.+.+.|.++++ .+|+++|+++.+. ++.+||+||+++++++|+.|+++|+++||+|+|+++|++++++++|||+++
T Consensus 15 ~~~~~l~~~a~-~~p~~~a~~~~~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~ 89 (540)
T PRK05857 15 TVLDRVFEQAR-QQPEAIALRRCDG----TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKL 89 (540)
T ss_pred chHHHHHHHHh-hCCCcEEEeecCC----CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 46778888888 8999999986532 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++.++++.++++++|+++....... .+.+.. ..+. .+.++.... .
T Consensus 90 G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~------~~~~~~-------~~~~-~~~~~~~~~----~--- 148 (540)
T PRK05857 90 GAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASS------AVPEAL-------HSIP-VIAVDIAAV----T--- 148 (540)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccc------cccccc-------cccc-eeEeecccc----c---
Confidence 999999999999999999999999999999876432110 000000 1111 222221100 0
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHH---HhhCCCCCcEEEEeCC
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDYKPSDVYWCTAD 437 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~~~~~d~~l~~~~ 437 (778)
.. +.+...... ........++++++|+|||||||.||||+++|++++.+...... ..++...+++.++.+|
T Consensus 149 ----~~-~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 222 (540)
T PRK05857 149 ----RE-SEHSLDAAS-LAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLP 222 (540)
T ss_pred ----cc-ccccccccc-cccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCC
Confidence 00 000011000 01122356789999999999999999999999996543221111 1245667899999999
Q ss_pred cchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEe
Q 004034 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 517 (778)
Q Consensus 438 ~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~g 517 (778)
++|..++. .++.+|+.|+++++.+ .++..++++|+++++|+++++|++++.|.+... ....+++++|.+++|
T Consensus 223 ~~h~~~l~-~~~~~l~~G~~~v~~~-----~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~g 294 (540)
T PRK05857 223 ATHIGGLW-WILTCLMHGGLCVTGG-----ENTTSLLEILTTNAVATTCLVPTLLSKLVSELK--SANATVPSLRLVGYG 294 (540)
T ss_pred ccccchHH-HHHHHhhcceeEEecC-----CChhHHHHHHHhcCcceEEeChHHHHHHHhccc--cCCCcCccceEEEEc
Confidence 99998854 5788899999987632 377899999999999999999999999987653 223578899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC---CCCCCCCcCcCcCCceEEEECCCCce------eC
Q 004034 518 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---WPQKPGSATFPFFGVQPVIVDEKGVE------IE 588 (778)
Q Consensus 518 Ge~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~---~~~~~~~~G~p~~g~~~~Ivd~~g~~------~~ 588 (778)
|++++....+++ +.++ +++++.||+||++...+...... ...+++++|+|++|++++|+|++++. ++
T Consensus 295 G~~~~~~~~~~~-~~~g---~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~ 370 (540)
T PRK05857 295 GSRAIAADVRFI-EATG---VRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGP 370 (540)
T ss_pred CccCCchhHHHH-HHhC---CeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCC
Confidence 999998887644 4555 78999999999986543222111 12356889999999999999987663 24
Q ss_pred CCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHh
Q 004034 589 GECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALV 668 (778)
Q Consensus 589 ~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~ 668 (778)
.|+.|||+|+| |++++|||++++.+.+.|. +|||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.
T Consensus 371 ~~~~Gel~v~g--~~~~~GY~~~~~~t~~~~~---~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~ 445 (540)
T PRK05857 371 SASFGTLWIKS--PANMLGYWNNPERTAEVLI---DGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAE 445 (540)
T ss_pred CCCcceEEEeC--cchhhhhhCCccchhhhcC---CCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHH
Confidence 57899999999 8999999999998887764 689999999999999999999999999999999999999999999
Q ss_pred cCCccceEEEEEEecCCCCeEEEEEEEEcCCCCC--CHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHH
Q 004034 669 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY--SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRIL 746 (778)
Q Consensus 669 ~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~--~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L 746 (778)
.||+|.+|+|+++++...++.++++|+..+.... .+++.+.+.+.+++.+++|++|..|+++++||+|++||++|++|
T Consensus 446 ~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l 525 (540)
T PRK05857 446 GVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASL 525 (540)
T ss_pred hCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHH
Confidence 9999999999999988777888888887654321 13456677778889999999999999999999999999999999
Q ss_pred HHHHhcccCc
Q 004034 747 RKIASRQLDE 756 (778)
Q Consensus 747 ~~~~~~~~~~ 756 (778)
++++++...+
T Consensus 526 ~~~~~~~~~~ 535 (540)
T PRK05857 526 AAAATADKAR 535 (540)
T ss_pred HHhhhhccce
Confidence 9999876544
No 43
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1e-67 Score=615.60 Aligned_cols=512 Identities=21% Similarity=0.233 Sum_probs=398.5
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCC----CcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHH
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDP----GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 277 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~----~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~ 277 (778)
+.++|+++++ ++||++|+++.+... ...+++||+||.++++++|++|.++|+++||+|+++++|++++++++|||
T Consensus 8 ~~~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~ 86 (552)
T PRK09274 8 IARHLPRAAQ-ERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFAL 86 (552)
T ss_pred HHHHHHHHHH-hCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHH
Confidence 4567888887 899999999863210 01238999999999999999999999999999999999999999999999
Q ss_pred HHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccc
Q 004034 278 ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN 357 (778)
Q Consensus 278 l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 357 (778)
+++|++++|++|.++.+++.+++++++++++|+++... ..+.+... .......++.++....
T Consensus 87 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-----------~~~~~~~~--~~~~~~~~i~~~~~~~----- 148 (552)
T PRK09274 87 FKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH-----------LARRLFGW--GKPSVRRLVTVGGRLL----- 148 (552)
T ss_pred HHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH-----------HHHHHhcc--Cccchhheeccccccc-----
Confidence 99999999999999999999999999999999865210 00001000 0011222222221100
Q ss_pred ccCCCCcccchhhccCCC-CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeC
Q 004034 358 TKWQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 436 (778)
Q Consensus 358 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~ 436 (778)
. ....+.+..... ....+.....++++++|+|||||||.||||+++|++++ .........+++.++|+.++..
T Consensus 149 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 222 (552)
T PRK09274 149 ----W-GGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFE-AQIEALREDYGIEPGEIDLPTF 222 (552)
T ss_pred ----c-CCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHH-HHHHHHHHHhCCCCCceeeecc
Confidence 0 011122222111 11122234567899999999999999999999999954 4444455678899999999988
Q ss_pred CcchhhhhhHHHHHHHhcCcEEEEEcCC---CCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeE
Q 004034 437 DCGWITGHSYVTYGPMLNGASVVVFEGA---PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRV 513 (778)
Q Consensus 437 ~~~~~~g~~~~i~~~L~~G~tlvl~~~~---~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~ 513 (778)
|+.|.. .+..|+++++.+.. +..+++..+++.|+++++|+++++|++++.|.+... ....++++||.
T Consensus 223 pl~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--~~~~~~~~lr~ 292 (552)
T PRK09274 223 PLFALF--------GPALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGE--ANGIKLPSLRR 292 (552)
T ss_pred CHHHhh--------hhhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhh--hcCCCCchhhE
Confidence 876533 24568888876422 223588999999999999999999999999987643 23457889999
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCC------C--CCCCCCCcCcCcCCceEEEECC---
Q 004034 514 LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------A--WPQKPGSATFPFFGVQPVIVDE--- 582 (778)
Q Consensus 514 v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~------~--~~~~~~~~G~p~~g~~~~Ivd~--- 582 (778)
+++|||++++++++++.+.++. ++++++.||+||++.+++..... . ......++|+|+++++++|+|+
T Consensus 293 ~~~gG~~~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~ 371 (552)
T PRK09274 293 VISAGAPVPIAVIERFRAMLPP-DAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDA 371 (552)
T ss_pred EEecCCcCCHHHHHHHHHHcCC-CceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEecccc
Confidence 9999999999999999999863 36899999999998755432211 0 0112347899999999999984
Q ss_pred ------CCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCC--eEEcCcEEEEecCCeEEEEeecCCEEEeC
Q 004034 583 ------KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRDKDGYHWLTGRVDDVINVS 654 (778)
Q Consensus 583 ------~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G--~yrTGDl~~~~~dG~l~~~GR~dd~Iki~ 654 (778)
++++++.|+.|||+|+| |.+++|||++++.+...++.+.+| ||+|||+|++|+||+|+|+||.||+||++
T Consensus 372 ~~~~~~~~~~~~~g~~Gel~v~g--~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~ 449 (552)
T PRK09274 372 PIPEWDDALRLATGEIGEIVVAG--PMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETA 449 (552)
T ss_pred ccccccccccCCCCCeeEEEEec--CcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEEC
Confidence 46789999999999999 899999999999888776554456 99999999999999999999999999999
Q ss_pred ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCC-HHHHHHHHHHHHhhcCCCccccEEEECCCC
Q 004034 655 GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGL 733 (778)
Q Consensus 655 G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~-~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~l 733 (778)
|++|+|.|||++|.+||+|.+|+|++++++ .++.++++|++.++...+ +++.++++++++.. +.++.|..|+++++|
T Consensus 450 G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~~~~l 527 (552)
T PRK09274 450 GGTLYTIPCERIFNTHPGVKRSALVGVGVP-GAQRPVLCVELEPGVACSKSALYQELRALAAAH-PHTAGIERFLIHPSF 527 (552)
T ss_pred CEEECcHHHHHHHHhCcccceeEEEEeCCC-CCceEEEEEEccCccccchHHHhhhhHHHHHhc-CCCcceeEEeccCCC
Confidence 999999999999999999999999999876 467889999988765433 23455666655443 556788999999999
Q ss_pred CCC--CCCcccHHHHHHHHhcc
Q 004034 734 PKT--RSGKIMRRILRKIASRQ 753 (778)
Q Consensus 734 P~T--~sGKi~R~~L~~~~~~~ 753 (778)
|+| +||||+|++|++++.++
T Consensus 528 P~t~~~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 528 PVDIRHNAKIFREKLAVWAAKQ 549 (552)
T ss_pred CccccccccccHHHHHHHHHHh
Confidence 999 79999999999988654
No 44
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.1e-67 Score=611.73 Aligned_cols=514 Identities=23% Similarity=0.302 Sum_probs=418.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++|+++|+++. ++.+||+||+++++++|+.|.++|+++||+|+|+++|++++++++|||+++
T Consensus 33 ~l~~~~~~~~~-~~p~~~a~~~~------~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~ 105 (573)
T PRK05605 33 TLVDLYDNAVA-RFGDRPALDFF------GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRL 105 (573)
T ss_pred CHHHHHHHHHH-HCCCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 37788999998 89999999986 578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccc----
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE---- 356 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~---- 356 (778)
|++++|++|.++.+++.+++++++++++|+++... ..+.+.... .....++.++........
T Consensus 106 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~ 171 (573)
T PRK05605 106 GAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVA---------PTVERLRRT-----TPLETIVSVNMIAAMPLLQRLA 171 (573)
T ss_pred CcEEeecCcCCCHHHHHHHHhccCCcEEEechhhH---------HHHHhhhhc-----cccceeEeeecccccccccccc
Confidence 99999999999999999999999999999976532 111111111 122223322211000000
Q ss_pred ------c-------ccCCCCcccchhhccCCCCCC----CCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHH
Q 004034 357 ------N-------TKWQDGRDIWWQDVVPKYPTK----CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT 419 (778)
Q Consensus 357 ------~-------~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~ 419 (778)
. ..........|.+........ .......++++++|+|||||||.||+|+++|++++.+....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 251 (573)
T PRK05605 172 LRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQG 251 (573)
T ss_pred cccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHH
Confidence 0 000011123344433221111 12234567899999999999999999999999966554432
Q ss_pred HHHhhCCC-CCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhc
Q 004034 420 FKYAFDYK-PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 498 (778)
Q Consensus 420 ~~~~~~~~-~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~ 498 (778)
.....++. .++++++..|+.|..|+...++.++..|+++++.+. ++++.+++.|+++++|++.++|++++.|.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~ 327 (573)
T PRK05605 252 KAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPA----PDIDLILDAMKKHPPTWLPGVPPLYEKIAEA 327 (573)
T ss_pred HhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCC----CCHHHHHHHHHHhCCEEEEchHHHHHHHHhC
Confidence 22222333 368999999999998877777888999999999864 4889999999999999999999999999986
Q ss_pred CCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEE
Q 004034 499 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 578 (778)
Q Consensus 499 ~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~ 578 (778)
.. ....++++||.+++||+++++++.+++.+.++ +++++.||+||+++++...... ....++++|+|++++.++
T Consensus 328 ~~--~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~---~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~ 401 (573)
T PRK05605 328 AE--ERGVDLSGVRNAFSGAMALPVSTVELWEKLTG---GLLVEGYGLTETSPIIVGNPMS-DDRRPGYVGVPFPDTEVR 401 (573)
T ss_pred cc--ccCCCchhccEEEECCCcCCHHHHHHHHHHhC---CCeecccccchhchhhhcCCcc-cCCcCCccccCCCCCEEE
Confidence 54 23456789999999999999999999988876 6799999999998765543221 123567899999999999
Q ss_pred EECCC--CceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCce
Q 004034 579 IVDEK--GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGH 656 (778)
Q Consensus 579 Ivd~~--g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~ 656 (778)
|+|++ +++++.|+.|||+|+| +.++.||+++++.+...|. +|||+|||+++++++|+++++||.||+||++|+
T Consensus 402 i~d~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~---~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~ 476 (573)
T PRK05605 402 IVDPEDPDETMPDGEEGELLVRG--PQVFKGYWNRPEETAKSFL---DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGF 476 (573)
T ss_pred EEcCCCCCccCCCCCeeEEEEec--CchhhhhcCChhHhhhccc---CCCcccCCEEEEcCCCcEEEEeccccceeeCCE
Confidence 99975 5889999999999999 8999999999988877654 479999999999999999999999999999999
Q ss_pred eeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCC
Q 004034 657 RIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKT 736 (778)
Q Consensus 657 rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T 736 (778)
+|+|.|||++|.+|+.|.+++|++++++..++.++++|++.++...+ .++|+++++++|+.+++|..|+++++||+|
T Consensus 477 ~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t 553 (573)
T PRK05605 477 NVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALD---PEGLRAYCREHLTRYKVPRRFYHVDELPRD 553 (573)
T ss_pred EECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCCC---HHHHHHHHHHhCccccCCcEEEEeccCCCC
Confidence 99999999999999999999999999888889999999988765443 478999999999999999999999999999
Q ss_pred CCCcccHHHHHHHHhcc
Q 004034 737 RSGKIMRRILRKIASRQ 753 (778)
Q Consensus 737 ~sGKi~R~~L~~~~~~~ 753 (778)
.+||++|++|++++.++
T Consensus 554 ~~GKi~r~~L~~~~~~~ 570 (573)
T PRK05605 554 QLGKVRRREVREELLEK 570 (573)
T ss_pred CcccccHHHHHHHHHHH
Confidence 99999999999988653
No 45
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.8e-68 Score=628.44 Aligned_cols=528 Identities=18% Similarity=0.243 Sum_probs=399.1
Q ss_pred cHHHHHHHHhhhccCCCeEEEEEE---cCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHH
Q 004034 200 NICYNCLDRNIEAGLGDKVAIYWE---ANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLA 276 (778)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~---~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA 276 (778)
.+++++|+++++ ++|+++|+.+. +...+..+.+||+||.++++++|++|+++|+++||+|+|+++|++||++++||
T Consensus 43 ~t~~~~l~~~~~-~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 121 (660)
T PLN02861 43 DSPWQFFSDAVK-KYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (660)
T ss_pred CCHHHHHHHHHH-hCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 367899999998 89999999763 11113356899999999999999999999999999999999999999999999
Q ss_pred HHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccc
Q 004034 277 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE 356 (778)
Q Consensus 277 ~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 356 (778)
|+++|++++|++|.++.+++.++|++++++++|+++... ..+......+ ...++.++.++........
T Consensus 122 ~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~---------~~~~~~~~~~---~~~l~~ii~~~~~~~~~~~ 189 (660)
T PLN02861 122 CNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI---------SSILSCLPKC---SSNLKTIVSFGDVSSEQKE 189 (660)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH---------HHHHHhhhhC---CCCCEEEEEECCCChhhhh
Confidence 999999999999999999999999999999999865421 1111111111 1235566655432100000
Q ss_pred cccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC-----CCCCcE
Q 004034 357 NTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-----YKPSDV 431 (778)
Q Consensus 357 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~-----~~~~d~ 431 (778)
...........|.+.+.......+.....++|+++|+|||||||.||||+++|++++.... .....++ +.++|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~-~~~~~~~~~~~~~~~~d~ 268 (660)
T PLN02861 190 EAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVL-STDHLLKVTDRVATEEDS 268 (660)
T ss_pred hhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHH-HHHhccccccccCCCCCE
Confidence 0000000112344333221111122345689999999999999999999999999655433 2333332 467899
Q ss_pred EEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCC-----------
Q 004034 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN----------- 500 (778)
Q Consensus 432 ~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~----------- 500 (778)
+++++|++|+++.... +.+|+.|++++++. +++..+++.|+++++|+++++|++++.|.+...
T Consensus 269 ~l~~lPl~H~~~~~~~-~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~ 342 (660)
T PLN02861 269 YFSYLPLAHVYDQVIE-TYCISKGASIGFWQ-----GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRK 342 (660)
T ss_pred EEEECcHHHHHHHHHH-HHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHH
Confidence 9999999999986654 45799999998873 378999999999999999999999998864100
Q ss_pred ------------------------cccccC-------CC-CceeEEEEecCCCCHHHHHHHHHHhCCCCcceeccccccc
Q 004034 501 ------------------------EYVTRY-------SR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTE 548 (778)
Q Consensus 501 ------------------------~~~~~~-------~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE 548 (778)
...... .+ ++||.+++||+++++++.+ |.+.++ ...+++.||+||
T Consensus 343 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~--~~~l~~~YG~TE 419 (660)
T PLN02861 343 KLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTS--CSVLSQGYGLTE 419 (660)
T ss_pred HHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHc--CCCeeEecchhh
Confidence 000000 12 5899999999999999855 556665 246999999999
Q ss_pred ccceecccCCCCCCCCCCCcCcCcCCceEEEEC--CCC-ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCC
Q 004034 549 TGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD--EKG-VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG 625 (778)
Q Consensus 549 ~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd--~~g-~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G 625 (778)
+++.++...... ..+++++|+|+++++++|+| +.| ..++.+..|||+|+| |+++.|||++++.+.+.|. +|
T Consensus 420 ~~~~~~~~~~~~-~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrG--p~v~~GY~~~pe~T~~~f~---dG 493 (660)
T PLN02861 420 SCGGCFTSIANV-FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRG--NTLFSGYHKRQDLTEEVLI---DG 493 (660)
T ss_pred hhhceeeccccc-CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcC--CcccccccCCHHHHHhhhh---cc
Confidence 986554333221 23568999999999999997 334 334456689999999 8999999999999988873 79
Q ss_pred eEEcCcEEEEecCCeEEEEeecCCEEEe-CceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCC-----
Q 004034 626 YYFTGDGCSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG----- 699 (778)
Q Consensus 626 ~yrTGDl~~~~~dG~l~~~GR~dd~Iki-~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~----- 699 (778)
||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|++.+ .++.++|+|++...
T Consensus 494 w~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~~~~l~~~ 570 (660)
T PLN02861 494 WFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPDRQALEDW 570 (660)
T ss_pred CcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcCHHHHHHH
Confidence 9999999999999999999999999998 59999999999999999999999999875 34679999998632
Q ss_pred -----CCCC-H------HHHHHHHHHHHh-----hcCCCccccEEEECC-CC-----CCCCCCcccHHHHHHHHhcccCc
Q 004034 700 -----VPYS-E------ELRKSLVLAVRK-----QIGAFAAPDKIHWAP-GL-----PKTRSGKIMRRILRKIASRQLDE 756 (778)
Q Consensus 700 -----~~~~-~------~l~~~l~~~l~~-----~Lp~~~~P~~i~~v~-~l-----P~T~sGKi~R~~L~~~~~~~~~~ 756 (778)
...+ . .....+.+.+.+ .++.|..++.|.+++ .| .+|+++|+.|+.+.+.+..++++
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~ 650 (660)
T PLN02861 571 AANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQ 650 (660)
T ss_pred HHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHH
Confidence 0001 1 122334444443 489999999999866 56 89999999999999999998887
Q ss_pred CCC
Q 004034 757 LGD 759 (778)
Q Consensus 757 ~~~ 759 (778)
+++
T Consensus 651 lY~ 653 (660)
T PLN02861 651 LYS 653 (660)
T ss_pred HHH
Confidence 764
No 46
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-67 Score=602.15 Aligned_cols=493 Identities=22% Similarity=0.310 Sum_probs=414.5
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+.++|+++++ ++|+++|+++. ++.+||.||.+++.++|.+|.+.|+++|++|+|+++|++++++++|||+++|
T Consensus 4 ~~~~~~~~~~-~~~~~~a~~~~------~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G 76 (497)
T PRK06145 4 LSASIAFHAR-RTPDRAALVYR------DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLG 76 (497)
T ss_pred HHHHHHHHHH-HCCCceEEEEC------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 5688999998 89999999986 6789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++.+++++++++++++++..... . .. . ...+.++....
T Consensus 77 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-------------~-~~-----~-~~~~~~~~~~~--------- 127 (497)
T PRK06145 77 AVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAI-------------V-AL-----E-TPKIVIDAAAQ--------- 127 (497)
T ss_pred cEEEecccccCHHHHHHHHHhcCCcEEEEccchhhh-------------h-hc-----c-cceEEecCccc---------
Confidence 999999999999999999999999999997654210 0 00 0 11122221100
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchh
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 441 (778)
..+.................++++++|+|||||||.||||+++|++++.. .......+++..+++++...|++|.
T Consensus 128 ----~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~ 202 (497)
T PRK06145 128 ----ADSRRLAQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWK-SIDHVIALGLTASERLLVVGPLYHV 202 (497)
T ss_pred ----chhHHHhccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHH-HHHHHHhhCCCCCcEEEEecCchhH
Confidence 00000000000111122356789999999999999999999999996543 3334456788999999999999998
Q ss_pred hhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCC
Q 004034 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (778)
Q Consensus 442 ~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (778)
.++....+.++..|+++++.+. +++..+++.++++++|++.++|++++.|+..... ...+++++|.+++|||++
T Consensus 203 ~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~--~~~~~~~l~~~~~gG~~~ 276 (497)
T PRK06145 203 GAFDLPGIAVLWVGGTLRIHRE----FDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDR--DRFDLDSLAWCIGGGEKT 276 (497)
T ss_pred hHHHHHHHHHHhccCEEEECCc----CCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCc--cccccccceEEEecCCCC
Confidence 8876666788999999988753 4899999999999999999999999999876542 345678999999999999
Q ss_pred CHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCC
Q 004034 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 601 (778)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~ 601 (778)
++++++++.+.++ +.++++.||+||++...+....+.....++++|+|+++++++|+|+++++++.|+.|||+++|
T Consensus 277 ~~~~~~~~~~~~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g-- 352 (497)
T PRK06145 277 PESRIRDFTRVFT--RARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMKGEICMRG-- 352 (497)
T ss_pred CHHHHHHHHHHcC--CCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCceEEEEEC--
Confidence 9999999999886 478999999999987544332222233567899999999999999999999999999999999
Q ss_pred CcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEE
Q 004034 602 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 681 (778)
Q Consensus 602 p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~ 681 (778)
+.++.||+++++.+...|. ++||+|||++++++||+++++||.||+||++|++|+|.|||++|.+||+|.+++|++.
T Consensus 353 ~~~~~Gy~~~~~~~~~~~~---~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~ 429 (497)
T PRK06145 353 PKVTKGYWKDPEKTAEAFY---GDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGV 429 (497)
T ss_pred cchhhhhcCChHHHHHHHh---CCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEec
Confidence 8999999999998888764 6899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 682 EHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 682 ~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
+++..++.+++++++.+....+ .++|+++++++|++|++|..|+++++||+|++||++|++|++++.
T Consensus 430 ~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 430 HDDRWGERITAVVVLNPGATLT---LEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred CCCccCceEEEEEEECCCCCCC---HHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 9888888999999987654433 578999999999999999999999999999999999999999764
No 47
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-68 Score=544.86 Aligned_cols=507 Identities=23% Similarity=0.331 Sum_probs=432.2
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.+.|.++++ ++||++|++.. ++.+||+||++++.++|..|+++|+++||+|.+-+||..|+++++||.+|+
T Consensus 29 ~l~d~L~~~A~-~~pdriAv~d~------~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrl 101 (542)
T COG1021 29 TLTDILTDHAA-RYPDRIAVIDG------ERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRL 101 (542)
T ss_pred cHHHHHHHHHh-hcCCceEEecC------cccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHc
Confidence 36688999998 99999999987 678999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|+++|.--|+....+|.+..+.+.++.+|.++.. ..+.......+.+... +.++++++.++....
T Consensus 102 Gv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~----~gFd~~~~ar~~~a~~----~tlr~v~v~ge~~~~------- 166 (542)
T COG1021 102 GVAPVLALPSHRASELGAFASQIEAALLIVARQH----SGFDYRPFARELVAKH----PTLRHVIVAGEAEHP------- 166 (542)
T ss_pred CcchhhccchhhHHHHHHHHHhhcchheeechhh----cccCcHHHHHHHHhhC----CcceEEEEccCCCCc-------
Confidence 9999999999999999999999999999988654 3445556656555554 677888776544210
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
...+...-.......+..+.+++++||..-+-||||.||-|..+|..|..+... ....++++..+++++.+|..|
T Consensus 167 ----~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~a-SaEiC~~~~~tvyL~~LP~AH 241 (542)
T COG1021 167 ----SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRA-SAEICGFDQQTVYLCALPAAH 241 (542)
T ss_pred ----chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeee-hhhhhCcCccceEEEeccccc
Confidence 001111111222233445677889999999999999999999999997655444 455789999999999999998
Q ss_pred hhhh-hHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 441 ITGH-SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 441 ~~g~-~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
.+-+ .-.+++.++.|+++|+.+. ++|+..+.+|++|+||+..++|.+...+++..+. ...+++|||.+=+||.
T Consensus 242 NfplssPG~LGv~~agG~VVla~~----psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~--~~~~LsSLrllQVGGa 315 (542)
T COG1021 242 NFPLSSPGALGVFLAGGTVVLAPD----PSPELCFPLIERHGVTVTALVPPLASLWLQAAEW--ERADLSSLRLLQVGGA 315 (542)
T ss_pred CCCCCCcchhheeeeccEEEECCC----CCHHHHHHHHHHhccceEEeccHHHHHHHHhhhc--ccCCchheeEEeecCc
Confidence 7643 2367889999999999865 5899999999999999999999999999988763 5668999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCc-CCceEEEECCCCceeCCCeeeEEEEe
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPF-FGVQPVIVDEKGVEIEGECSGYLCIK 598 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~-~g~~~~Ivd~~g~~~~~g~~GEL~v~ 598 (778)
.+++++.+++...+| |.+.+.+||.|--. ..+...+.......+-|+|+ |.-+++|+|++|+++++|++|+|..+
T Consensus 316 rl~~~~Arrv~~~lg---C~LQQVFGMAEGLv-nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~G~LltR 391 (542)
T COG1021 316 RLSATLARRVPAVLG---CQLQQVFGMAEGLV-NYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEVGELLTR 391 (542)
T ss_pred ccCHHHHhhchhhhC---chHHHHhhhhhhhh-cccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCcceeeec
Confidence 999999999999998 89999999999643 22222222223345679998 67899999999999999999999999
Q ss_pred cCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEE
Q 004034 599 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 678 (778)
Q Consensus 599 g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~V 678 (778)
| |-..+|||+-++-....|.. +|+|+|||++++|+||+|.+.||.+|||+.+|++|-.+|||+.|+.||.|.+|++
T Consensus 392 G--PYTirGYyrap~HNa~aF~a--~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAl 467 (542)
T COG1021 392 G--PYTIRGYYRAPEHNARAFDA--DGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAAL 467 (542)
T ss_pred C--CeeeeeeccCchhhhhccCc--CCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhh
Confidence 9 88999999999888888765 8999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhh-cCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 679 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 679 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
|+.+|+.-||+.+|||+.++... + ..+++.+|+++ +..|++|++|.+++.||+|+-||||+++|++.+..
T Consensus 468 VampDelLGEksCAfiv~~~~~~-~---~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 468 VAMPDELLGEKSCAFIVVKEPPL-R---AAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred hcCchhhcCcceeEEEEecCCCC-C---HHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhh
Confidence 99999999999999999987643 2 56888888775 89999999999999999999999999999988753
No 48
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-67 Score=620.95 Aligned_cols=511 Identities=20% Similarity=0.186 Sum_probs=399.5
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcC---CCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEAN---DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 277 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~---~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~ 277 (778)
.+.++|+++++ .+||++|+++.+. ..+..+.+||+||+++++++|++|++. +++||+|+|+++|++++++++|||
T Consensus 22 ~l~~~l~~~a~-~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA~ 99 (631)
T PRK07769 22 NLVRHVERWAK-VRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFGA 99 (631)
T ss_pred CHHHHHHHHHH-hCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHHH
Confidence 46788999988 8999999998531 112347899999999999999999987 899999999999999999999999
Q ss_pred HHhCCEEEeC-CCCCC--HHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccc
Q 004034 278 ARIGAVHSVV-FAGFS--SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 354 (778)
Q Consensus 278 l~~Gav~vpl-~p~~~--~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 354 (778)
+++|++++|+ ++..+ .+++.+++++++++++|+++... ..+........ ......++.++...
T Consensus 100 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~--- 165 (631)
T PRK07769 100 LYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSA---------EGVRKFFRARP--AKERPRVIAVDAVP--- 165 (631)
T ss_pred HHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHH---------HHHHHHHhhcc--ccccceEEEccccc---
Confidence 9999999999 56655 68899999999999999976531 11222111110 00112233222110
Q ss_pred cccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEE
Q 004034 355 RENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWC 434 (778)
Q Consensus 355 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~ 434 (778)
+.... ........++++++|+|||||||+||||+++|++++.+ .......+++.++|++++
T Consensus 166 ---------------~~~~~---~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~l~ 226 (631)
T PRK07769 166 ---------------DEVGA---TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTN-VLQVIDALEGQEGDRGVS 226 (631)
T ss_pred ---------------ccccc---ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHH-HHHHHHHcCCCCcceEEE
Confidence 00000 01112346799999999999999999999999996544 344455678889999999
Q ss_pred eCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCc---cEEEecHHHHHHHHhc---CCcccccCCC
Q 004034 435 TADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV---TIFYTAPTLVRSLMRD---GNEYVTRYSR 508 (778)
Q Consensus 435 ~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~v---T~l~~~Ps~l~~L~~~---~~~~~~~~~l 508 (778)
++|++|+.|+. .++.+++.|++++++.+.....++..+++.++++++ +++..+|+++..+... ........++
T Consensus 227 ~~Pl~h~~gl~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l 305 (631)
T PRK07769 227 WLPFFHDMGLI-TVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDL 305 (631)
T ss_pred eCCCcCchhhH-HHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcch
Confidence 99999999864 456677889999988542222378899999999986 7899999988776643 1111113578
Q ss_pred CceeEEEEecCCCCHHHHHHHHHHhCC---CCcceecccccccccceecccCCCCC------------------------
Q 004034 509 KSLRVLGSVGEPINPSAWRWFFNVVGD---SRCPISDTWWQTETGGFMITPLPGAW------------------------ 561 (778)
Q Consensus 509 ~sLr~v~~gGe~l~~~~~~~~~~~~g~---~~~~i~~~YG~TE~g~~~~~~~~~~~------------------------ 561 (778)
++||.+++||++++++++++|.+.++. ....+++.||+||++.+++.......
T Consensus 306 ~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 385 (631)
T PRK07769 306 SNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAP 385 (631)
T ss_pred hheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCC
Confidence 999999999999999999999998742 22469999999999865543221110
Q ss_pred -CCCCCCcCcCcCCceEEEECC-CCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC---------------CCC
Q 004034 562 -PQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK---------------PFP 624 (778)
Q Consensus 562 -~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~---------------~~~ 624 (778)
.....++|+|+++++++|+|+ ++++++.|+.|||+|+| |+++.|||++++.+.+.|.. ..+
T Consensus 386 ~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~g--p~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~ 463 (631)
T PRK07769 386 NAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHG--NNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDA 463 (631)
T ss_pred CceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecC--CCccccccCChhHHHHHHhhhcccccccccccCcccCC
Confidence 012357999999999999994 78999999999999999 89999999999988877752 124
Q ss_pred CeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhc-CCccce--EEEEEEec------------------
Q 004034 625 GYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVS-HPQCAE--AAVVGVEH------------------ 683 (778)
Q Consensus 625 G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~-~p~V~e--a~Vv~~~~------------------ 683 (778)
|||+|||+|+++ ||+|+|+||.||+||++|++|+|.|||++|.+ ||.|.+ ++|+++++
T Consensus 464 gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~ 542 (631)
T PRK07769 464 LWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFD 542 (631)
T ss_pred CeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccc
Confidence 799999999995 99999999999999999999999999999996 899998 99999998
Q ss_pred -CCCCeEEEEEEEEcCCC-CCCHHHHHHHHHHHHhhcCC-Cc-cccEEEECC--CCCCCCCCcccHHHHHHHHhcc
Q 004034 684 -EVKGQGIYAFVTLVEGV-PYSEELRKSLVLAVRKQIGA-FA-APDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 684 -~~~~~~lva~Vv~~~~~-~~~~~l~~~l~~~l~~~Lp~-~~-~P~~i~~v~--~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
+..++.++++|+++++. ..+ .++|+++++++|+. |. .|+.+++++ +||+|++|||+|++|++.+...
T Consensus 543 ~~~~ge~~~a~v~~~~~~~~~~---~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~ 615 (631)
T PRK07769 543 PEDTSEQLVIVAERAPGAHKLD---PQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDG 615 (631)
T ss_pred cCCCCccEEEEEEecCcccccc---HHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcC
Confidence 55788999999988753 222 57889999999885 56 488888887 6999999999999999987644
No 49
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-67 Score=599.09 Aligned_cols=480 Identities=21% Similarity=0.267 Sum_probs=401.9
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+.+.|+++++ ++||++|+++. ++++||.||.++++++|++|.+.|. +||+|+|+++|++++++++|||+++|
T Consensus 3 ~~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G 74 (487)
T PRK07638 3 ITKEYKKHAS-LQPNKIAIKEN------DRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAG 74 (487)
T ss_pred hHHHHHHHHH-hCCCCeEEecC------CcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 5577888888 89999999976 5799999999999999999999984 89999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++.++++.++++++|+++...... .. .. ..++.++..
T Consensus 75 ~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-------------~~-----~~-~~~~~~~~~----------- 124 (487)
T PRK07638 75 WTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDL-------------PD-----EE-GRVIEIDEW----------- 124 (487)
T ss_pred eEEEecCccCCHHHHHHHHHhCCCCEEEEecccccch-------------hh-----cc-ceEEEehhh-----------
Confidence 9999999999999999999999999999987542110 00 00 112222111
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchh
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 441 (778)
.+.+..............+++++|+|||||||.||||+++|++++.+. ......+++.++|+++...++.|.
T Consensus 125 -------~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~-~~~~~~~~~~~~d~~~~~~~l~~~ 196 (487)
T PRK07638 125 -------KRMIEKYLPTYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSF-DCNVHDFHMKREDSVLIAGTLVHS 196 (487)
T ss_pred -------hhhhhhccccccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHH-HHHHHhcCcCCCCEEEEeecchHH
Confidence 001111111111112235778999999999999999999999965544 445567888999999999999998
Q ss_pred hhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCC
Q 004034 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (778)
Q Consensus 442 ~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (778)
.+ ++.++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|.+... ...+.+.++++|+++
T Consensus 197 ~~-l~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------~~~~~~~~~~~G~~l 265 (487)
T PRK07638 197 LF-LYGAISTLYVGQTVHLMRK----FIPNQVLDKLETENISVMYTVPTMLESLYKENR------VIENKMKIISSGAKW 265 (487)
T ss_pred HH-HHHHHHHHccCcEEEEcCC----CCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC------cCCceeEEEEcCCCC
Confidence 76 5678889999999998754 489999999999999999999999999988632 234566778899999
Q ss_pred CHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCC
Q 004034 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 601 (778)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~ 601 (778)
++++.+++.+.++ ++.+++.||+||++.+...... ....++.++|+|+++++++|+|++|++++.|+.|||+|+|
T Consensus 266 ~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~Gel~v~~-- 340 (487)
T PRK07638 266 EAEAKEKIKNIFP--YAKLYEFYGASELSFVTALVDE-ESERRPNSVGRPFHNVQVRICNEAGEEVQKGEIGTVYVKS-- 340 (487)
T ss_pred CHHHHHHHHHHcC--CCeEEEEecCCccCceEEeccc-ccCCCCCCCCcccCCcEEEEECCCCCCCCCCCCeEEEEec--
Confidence 9999999999986 4789999999999976543322 2234677899999999999999999999999999999999
Q ss_pred CcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEE
Q 004034 602 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 681 (778)
Q Consensus 602 p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~ 681 (778)
|.++.||+++++.+... + .+|||+|||++++|+||+++++||+||+||++|++|+|.|||++|.+||+|.+++|++.
T Consensus 341 ~~~~~gy~~~~~~~~~~-~--~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~ 417 (487)
T PRK07638 341 PQFFMGYIIGGVLAREL-N--ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGV 417 (487)
T ss_pred ccceeeecCCHHHHhhh-c--cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEec
Confidence 88999999999766543 2 36899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 682 EHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 682 ~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
+++..++.++++|+.. .. .+++++++++.|+.|++|..|+++++||+|++||++|++|++++..+
T Consensus 418 ~~~~~g~~~~~~v~~~----~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 418 PDSYWGEKPVAIIKGS----AT---KQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQ 482 (487)
T ss_pred CchhcCCeeEEEEECC----CC---HHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcc
Confidence 9988888899988742 11 57899999999999999999999999999999999999999988754
No 50
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-66 Score=601.80 Aligned_cols=511 Identities=24% Similarity=0.311 Sum_probs=425.0
Q ss_pred cHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
++++++|.++++ .+||++|+++. ++.+||.||.+++.++|..|.+.|+++||+|+++++|++++++++|||++
T Consensus 11 ~~l~~~l~~~a~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~ 83 (523)
T PRK08316 11 QTIGDILRRSAR-RYPDKTALVFG------DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACAR 83 (523)
T ss_pred CCHHHHHHHHHH-HCCCCeEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 468899999998 89999999987 58999999999999999999999999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccccc
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (778)
+|++++|+++.++.+++.++++.++++++++++... ..+.+..+.. . ...+. ..... ...
T Consensus 84 ~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~-~~~~~-~~~~~-----~~~ 143 (523)
T PRK08316 84 AGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALA---------PTAEAALALL----P-VDTLI-LSLVL-----GGR 143 (523)
T ss_pred cCcEEEecccccCHHHHHHHHHhCCCCEEEEccchH---------HHHHHHhhhc----C-cccee-eeecc-----ccc
Confidence 999999999999999999999999999999987542 1222222211 1 11111 10000 000
Q ss_pred CCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcc
Q 004034 360 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
........+.+.....+...+.....++++++|+|||||||.||+|.++|++++.... .....+++.++|+++..+|+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~p~~ 222 (523)
T PRK08316 144 EAPGGWLDFADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYV-SCIVAGDMSADDIPLHALPLY 222 (523)
T ss_pred ccccchhhHHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHH-HHHHHhCCCCCceEEEccCCc
Confidence 0011122233333222222233456788999999999999999999999999654433 345567899999999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|..++...++.++..|+++++.+. +++..+++.++++++|++.++|+++..|.+... ....++++||.+++||+
T Consensus 223 h~~g~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~~gg~ 296 (523)
T PRK08316 223 HCAQLDVFLGPYLYVGATNVILDA----PDPELILRTIEAERITSFFAPPTVWISLLRHPD--FDTRDLSSLRKGYYGAS 296 (523)
T ss_pred hhhhHHHHHHHHHhcCceEEEecC----CCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcc--cccCCcccceEEEEcCC
Confidence 998866666778899999999864 488999999999999999999999999988754 23457789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEec
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g 599 (778)
+++.++.+.+.+.++ ++++++.||+||++.+.............+++|+|+++++++|+|+++++++.|+.|||+++|
T Consensus 297 ~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gei~v~~ 374 (523)
T PRK08316 297 IMPVEVLKELRERLP--GLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEVGEIVHRS 374 (523)
T ss_pred cCCHHHHHHHHHHcC--CCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCcceEEEEC
Confidence 999999999999875 478999999999987655433222234567899999999999999999999999999999999
Q ss_pred CCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEE
Q 004034 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 679 (778)
Q Consensus 600 ~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv 679 (778)
+.++.||+++++.+...|. +|||+|||+|++++||+++++||.||+||++|++|+|.+||+.|.++|+|.+++|+
T Consensus 375 --~~~~~~y~~~~~~~~~~~~---~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~ 449 (523)
T PRK08316 375 --PQLMLGYWDDPEKTAEAFR---GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVI 449 (523)
T ss_pred --CchhhhhcCCHHHHHHHhh---CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEe
Confidence 8999999999988777652 68999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhccc
Q 004034 680 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 754 (778)
Q Consensus 680 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~ 754 (778)
+++++..++.+++++++.++.... .++|+++++++|+.|++|..+++++++|+|++||++|++|++++.+.+
T Consensus 450 ~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~ 521 (523)
T PRK08316 450 GLPDPKWIEAVTAVVVPKAGATVT---EDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAF 521 (523)
T ss_pred cccCcccCCeEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhc
Confidence 999988889999999988665433 567899999999999999999999999999999999999999997653
No 51
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.1e-66 Score=606.05 Aligned_cols=514 Identities=23% Similarity=0.349 Sum_probs=420.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++||++|++..+ ++++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 24 ~l~~~~~~~~~-~~pd~~a~~~~~-----~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~ 97 (547)
T PRK06087 24 SLADYWQQTAR-AMPDKIAVVDNH-----GASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKV 97 (547)
T ss_pred CHHHHHHHHHH-HCCCceEEEcCC-----CCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 37788999998 899999998642 478999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++.+++++++++++++++..... ...+.+.+....+ .....++.++....
T Consensus 98 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 161 (547)
T PRK06087 98 GAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQT----RPVDLILPLQNQL----PQLQQIVGVDKLAP-------- 161 (547)
T ss_pred CcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccc----cHHHHHHHHHhhC----CCCcEEEEeCCcCC--------
Confidence 9999999999999999999999999999997653211 1122222222222 33445554443210
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
......+.+.+.............++++++|+|||||||.||||+++|++++.. .......+++.++|++++..|++|
T Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~l~~~pl~h 239 (547)
T PRK06087 162 -ATSSLSLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILAS-ERAYCARLNLTWQDVFMMPAPLGH 239 (547)
T ss_pred -CcCccCHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHH-HHHHHHhcCCCCCCeEEEecchHH
Confidence 001122333333222222223456789999999999999999999999996544 344555678899999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
.+++...++.++..|+++++.+. +++..+++.|+++++|++..+|+.+..+++... ....++++||.+++||++
T Consensus 240 ~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~--~~~~~~~~lr~i~~gG~~ 313 (547)
T PRK06087 240 ATGFLHGVTAPFLIGARSVLLDI----FTPDACLALLEQQRCTCMLGATPFIYDLLNLLE--KQPADLSALRFFLCGGTT 313 (547)
T ss_pred HHHHHHHHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCCEEeccHHHHHHHHhccc--cCCCCCCCeEEEEEcCCC
Confidence 99887788899999999999764 489999999999999999888777777766533 223467899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecC
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~ 600 (778)
+++++.+.+.+. + +++++.||+||++.+.+............+.|+|++++.++|+|+++++++.|+.|||+|+|
T Consensus 314 ~~~~~~~~~~~~-~---~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g- 388 (547)
T PRK06087 314 IPKKVARECQQR-G---IKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCEGEEASRG- 388 (547)
T ss_pred CCHHHHHHHHHc-C---CcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCcceEEEec-
Confidence 999999887664 4 78999999999987655332221122346789999999999999999999999999999999
Q ss_pred CCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEE
Q 004034 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVG 680 (778)
Q Consensus 601 ~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 680 (778)
+.+++||+++++.+...+.. +|||+|||+++++++|+++++||.||+||++|++|+|.+||++|.++|+|.+++|++
T Consensus 389 -~~~~~gy~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 465 (547)
T PRK06087 389 -PNVFMGYLDEPELTARALDE--EGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVA 465 (547)
T ss_pred -ccccccccCCHHHHHHHhCC--CCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 89999999999888776543 689999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCC-CCCCHHHHHHHHHHHH-hhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccC
Q 004034 681 VEHEVKGQGIYAFVTLVEG-VPYSEELRKSLVLAVR-KQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLD 755 (778)
Q Consensus 681 ~~~~~~~~~lva~Vv~~~~-~~~~~~l~~~l~~~l~-~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~ 755 (778)
.+++..++.++++|+..+. ...+ .+++.++++ +.++.+++|..|.++++||+|.+||++|++|++.+.++..
T Consensus 466 ~~~~~~g~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~~ 539 (547)
T PRK06087 466 MPDERLGERSCAYVVLKAPHHSLT---LEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRLT 539 (547)
T ss_pred cCCCCcCceEEEEEEECCCCCCCC---HHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHhh
Confidence 9988888999999998753 2222 467777775 5799999999999999999999999999999999886643
No 52
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.1e-66 Score=603.31 Aligned_cols=501 Identities=22% Similarity=0.317 Sum_probs=410.3
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ .+|+++|+++. .+++||+||.++++++|..|+++|+++||+|+|+++|++++++++|||+++
T Consensus 24 ~l~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 96 (527)
T TIGR02275 24 PLTDILRDQAA-RYPDAIAIICG------NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKL 96 (527)
T ss_pred cHHHHHHHHHH-HCCCceEEEeC------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 36788999998 89999999875 679999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++++++.++.+++.++++.++++++++++.... +.......+....+ +.++.++...... .
T Consensus 97 G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------~ 160 (527)
T TIGR02275 97 GIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSL----FDYDAFARQLQSKL----PTLRNIIVAGQTR--------V 160 (527)
T ss_pred CeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccc----cchHHHHHHHHhhC----CcceEEEEecCCC--------C
Confidence 999999999999999999999999999999865321 11111111111111 2333333322110 0
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
.....+.+.......+.....++++++|+|||||||.||||+++|.+++.+.. .....+.+.++|++++.+|++|
T Consensus 161 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~-~~~~~~~~~~~d~~l~~~P~~h 235 (527)
T TIGR02275 161 ----EAELFLWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVR-RSVEICWLTQQTRYLCALPAAH 235 (527)
T ss_pred ----cchhhHHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHH-HHHhhcCCCcCCEEEECCChHh
Confidence 00000111111111222345689999999999999999999999999655443 3455678889999999999999
Q ss_pred hhhhhH-HHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 441 ITGHSY-VTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 441 ~~g~~~-~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
.+++.. .++.++..|+++++.+. +++..+++.++++++|++..+|++++.|.+.... ...+++++|.+++||+
T Consensus 236 ~~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~gG~ 309 (527)
T TIGR02275 236 NYPLSSPGALGVFYAGGCVVLAPD----PSPTDCFPLIERHKVTVTALVPPAVALWMQAASK--SRYDLSSLKLLQVGGA 309 (527)
T ss_pred hhhhhHHHHHHHHhcCCeEEECCC----CCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccc--cCCCccceEEEEEcCC
Confidence 887544 47889999999988643 4789999999999999999999999998876542 3456789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCc-CCceEEEECCCCceeCCCeeeEEEEe
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPF-FGVQPVIVDEKGVEIEGECSGYLCIK 598 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~-~g~~~~Ivd~~g~~~~~g~~GEL~v~ 598 (778)
++++++++++.+.++ +++++.||+||++.... ..........+++|+|+ ++..++|+|++|++++.|+.|||+|+
T Consensus 310 ~l~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~-~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~Gei~v~ 385 (527)
T TIGR02275 310 KFSEAAARRVPAVFG---CQLQQVFGMAEGLVNYT-RLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGETGMLLTR 385 (527)
T ss_pred CCCHHHHHHHHHHhC---CeEEeeeccCccCcccc-CCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCceEEEec
Confidence 999999999999887 68999999999754332 11111123456899999 48999999999999999999999999
Q ss_pred cCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEE
Q 004034 599 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 678 (778)
Q Consensus 599 g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~V 678 (778)
| |.++.|||++++.+...+.. +|||+|||++++++||+++++||.||+||++|++|+|.|||++|.+||+|.+++|
T Consensus 386 g--~~~~~gY~~~~~~~~~~~~~--dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v 461 (527)
T TIGR02275 386 G--PYTFRGYYKAPEHNAAAFDA--EGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAAL 461 (527)
T ss_pred C--CccchhhcCChhHhHhhcCc--CCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEE
Confidence 9 89999999999988777644 6899999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhh-cCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 679 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 679 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
+++++...++.++++|+++++. .+ .++|+++++++ ++.|++|..|+++++||+|++||++|++|+
T Consensus 462 ~~~~~~~~~~~~~a~vv~~~~~-~~---~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 462 VSMPDELLGEKSCAFIVVRDPA-LK---AAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred EecCCcccccEEEEEEEECCCC-CC---HHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 9999988889999999987653 22 57899999985 999999999999999999999999999874
No 53
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.7e-66 Score=603.41 Aligned_cols=501 Identities=23% Similarity=0.315 Sum_probs=413.7
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ .+||++|+++. ++++||+||.+++.++|..|.+.|+++|++|+|+++|++++++++|||+++
T Consensus 22 ~l~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~ 94 (542)
T PRK06155 22 TLPAMLARQAE-RYPDRPLLVFG------GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWL 94 (542)
T ss_pred CHHHHHHHHHH-HCCCCeEEEeC------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 47789999998 89999999976 578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++..++++++++++++++... ..+.+... ....+..++.++.... .
T Consensus 95 G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~---------~~~~~~~~----~~~~~~~~~~~~~~~~-------~ 154 (542)
T PRK06155 95 GAIAVPINTALRGPQLEHILRNSGARLLVVEAALL---------AALEAADP----GDLPLPAVWLLDAPAS-------V 154 (542)
T ss_pred CCEEEEeccccCHHHHHHHHHhcCceEEEEChhhH---------HHHHHhcc----cccCcceEEEecCccc-------c
Confidence 99999999999999999999999999999976542 11111111 0122344554443211 0
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
.........+.. ............++++++|+|||||||.||||+++|++++.. .......+++.+++++++..|++|
T Consensus 155 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~-~~~~~~~~~~~~~~~~l~~~pl~~ 232 (542)
T PRK06155 155 SVPAGWSTAPLP-PLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWW-GRNSAEDLEIGADDVLYTTLPLFH 232 (542)
T ss_pred ccccccchhhhc-ccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHH-HHHHHHhcCCCCCCEEEEecCHHH
Confidence 000000000010 011111223456799999999999999999999999996444 444556788999999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
..++ ..++.+++.|+++++.+. .++..+++.|+++++|++.++|+++..|.+.... .....+++|.++.+|
T Consensus 233 ~~~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~l~~~~~g~-- 303 (542)
T PRK06155 233 TNAL-NAFFQALLAGATYVLEPR----FSASGFWPAVRRHGATVTYLLGAMVSILLSQPAR--ESDRAHRVRVALGPG-- 303 (542)
T ss_pred HHHH-HHHHHHHHcCceEEeeCC----CCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCc--cccccCceEEEEEcC--
Confidence 8874 467899999999998753 4899999999999999999999999999877542 234567899887665
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecC
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~ 600 (778)
+++.+.+++.+.++ +++++.||+||++.++..... ...++++|.|+++++++|+|+++++++.|+.|||+|+|+
T Consensus 304 ~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~---~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gei~v~~~ 377 (542)
T PRK06155 304 VPAALHAAFRERFG---VDLLDGYGSTETNFVIAVTHG---SQRPGSMGRLAPGFEARVVDEHDQELPDGEPGELLLRAD 377 (542)
T ss_pred CCHHHHHHHHHHcC---CCEEeeecccccCccccCCCC---CCCCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecC
Confidence 57888899988886 689999999999876543221 246678999999999999999999999999999999995
Q ss_pred CC-cccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEE
Q 004034 601 WP-GAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 679 (778)
Q Consensus 601 ~p-~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv 679 (778)
.| +++.||+++++.+...+ . +|||+|||+|++++||+++|+||.||+||++|.+|+|.|||++|.+||+|.+++|+
T Consensus 378 ~~~~~~~GY~~~~~~~~~~~-~--~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~ 454 (542)
T PRK06155 378 EPFAFATGYFGMPEKTVEAW-R--NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVF 454 (542)
T ss_pred CccccchhhcCCHHHHHHhh-c--CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 43 79999999998887764 2 68999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 680 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 680 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
+++++..++.+.+++++..+...+ ..+++++++++|+.|++|..|+++++||+|++||++|++|++++.
T Consensus 455 ~v~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 455 PVPSELGEDEVMAAVVLRDGTALE---PVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred eecccccCceEEEEEEECCCCCCC---HHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 999988888899999987665443 578999999999999999999999999999999999999999764
No 54
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-66 Score=602.84 Aligned_cols=503 Identities=23% Similarity=0.361 Sum_probs=413.3
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+.++|.++++ ++||++|+++. ++++||+||.++++++|..|++.|+++||+|+|+++|++++++++|||+++|
T Consensus 9 ~~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 81 (528)
T PRK07470 9 LAHFLRQAAR-RFPDRIALVWG------DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLG 81 (528)
T ss_pred HHHHHHHHHH-HCCCceEEEEC------CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCC
Confidence 5678888888 89999999975 5789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++.+++++++++++++++.... .+....... .....++.+....
T Consensus 82 ~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~----~~~~~~~~~~~~~---------- 138 (528)
T PRK07470 82 AVWVPTNFRQTPDEVAYLAEASGARAMICHADFPE---------HAAAVRAAS----PDLTHVVAIGGAR---------- 138 (528)
T ss_pred eEEEecCccCCHHHHHHHHHhcCceEEEEcchhHH---------HHHHHHhhC----CcCceEEEeCCCc----------
Confidence 99999999999999999999999999999875421 111111111 2333444443211
Q ss_pred CCcccchhhccCCC-CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHh-hCCCCCcEEEEeCCcc
Q 004034 362 DGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA-FDYKPSDVYWCTADCG 439 (778)
Q Consensus 362 ~~~~~~~~~~l~~~-~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~-~~~~~~d~~l~~~~~~ 439 (778)
....+.+.+... ..........++++++|+|||||||.||||+++|++++.......... .+..++|+++..+|++
T Consensus 139 --~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 216 (528)
T PRK07470 139 --AGLDYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLS 216 (528)
T ss_pred --ccccHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccch
Confidence 012233332221 111223345678999999999999999999999999643333222222 2567789999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|..++ ..+ ..++.|++.++++.. .++++.+++.|+++++|++.++|++++.|.+... ....+++++|.+++||+
T Consensus 217 ~~~~~-~~~-~~~~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gG~ 290 (528)
T PRK07470 217 HGAGI-HQL-CQVARGAATVLLPSE--RFDPAEVWALVERHRVTNLFTVPTILKMLVEHPA--VDRYDHSSLRYVIYAGA 290 (528)
T ss_pred hHHHH-HHH-HHHhcCceEEEeccc--CcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcC--cCCCCCcceEEEEEcCC
Confidence 98874 333 467888888887642 2488999999999999999999999999987654 23356789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCC------CCCCCCCCcCcCcCCceEEEECCCCceeCCCeee
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------AWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSG 593 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~------~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~G 593 (778)
++++.+.+++.+.+| .++++.||+||+++.+...... ......+++|+|++|++++|+|+++++++.|+.|
T Consensus 291 ~l~~~~~~~~~~~~g---~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~G 367 (528)
T PRK07470 291 PMYRADQKRALAKLG---KVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGETG 367 (528)
T ss_pred CCCHHHHHHHHHHhC---cHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCce
Confidence 999999999988887 5799999999998755432211 0123457899999999999999999999999999
Q ss_pred EEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCcc
Q 004034 594 YLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQC 673 (778)
Q Consensus 594 EL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V 673 (778)
||+|+| +.++.||+++++.+...+. +|||+|||++++++||+++++||.||+||++|+||+|.|||++|.++|.|
T Consensus 368 el~i~~--~~~~~gy~~~~~~~~~~~~---~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v 442 (528)
T PRK07470 368 EICVIG--PAVFAGYYNNPEANAKAFR---DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAV 442 (528)
T ss_pred EEEEeC--CccchhhcCCHHHHHhhhc---CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCc
Confidence 999999 8999999999988876653 68999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 674 AEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 674 ~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
.+++|++.+++..++.++++++..++...+ .++++++|++.||.|++|..++++++||+|++||++|+.|++++..+
T Consensus 443 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 443 SEVAVLGVPDPVWGEVGVAVCVARDGAPVD---EAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred eEEEEEeccCcccCceeEEEEEECCCCCCC---HHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhc
Confidence 999999999887788899999987664433 56899999999999999999999999999999999999999988754
No 55
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-66 Score=609.07 Aligned_cols=523 Identities=19% Similarity=0.232 Sum_probs=417.8
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
++.++|++++. .+|+++|+++.++ .++.+||+||.++++++|++|++ .|+++||+|+++++|++++++++|||++
T Consensus 11 ~~~~~l~~~a~-~~~~~~a~~~~~~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 11 SLTRILEYGST-VHGDTTVTTWGGA---EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred cHHHHHHHHHH-hCCCceEEEEcCC---ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 37789999998 8999999998643 26899999999999999999986 7999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccccc
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (778)
+|++++|++|.++.+++.+++++++++++|+++... ..+.+.+..+ +..+.++.++...... ....
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~i~~~~~~~~~~-~~~~ 152 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLA---------EQLGEILKEC----PCVRAVVFIGPSDADS-AAAH 152 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhhH---------HHHHHHHhhC----ccccEEEEecCccccc-chhc
Confidence 999999999999999999999999999999976532 2333333333 3344455443221000 0000
Q ss_pred CC-CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH-HHHHhhCCCCCcEEEEeCC
Q 004034 360 WQ-DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT-TFKYAFDYKPSDVYWCTAD 437 (778)
Q Consensus 360 ~~-~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~-~~~~~~~~~~~d~~l~~~~ 437 (778)
.. ......|.+.++......+.....++++++|+|||||||+||||+++|++++..... .....+++.+++++++.+|
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p 232 (576)
T PRK05620 153 MPEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVP 232 (576)
T ss_pred cccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCC
Confidence 00 112234555554333222333456799999999999999999999999996443322 1223467888999999999
Q ss_pred cchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEe
Q 004034 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 517 (778)
Q Consensus 438 ~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~g 517 (778)
++|..+. ..++.++..|+++++.... +++..+++.|+++++|++..+|+++..|+..... ...+..+||.+++|
T Consensus 233 l~h~~g~-~~~~~~l~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~~g 306 (576)
T PRK05620 233 IYHVLSW-GVPLAAFMSGTPLVFPGPD---LSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLK--NPPERMSLQEIYVG 306 (576)
T ss_pred hHHhhhh-HHHHHHHhcCceEEecCCC---CCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhc--cCcccCceeEEEEc
Confidence 9999884 4567889999999887532 4889999999999999999999999988765321 11234689999999
Q ss_pred cCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC--C----CCCCCCcCcCcCCceEEEECCCCceeC--C
Q 004034 518 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--W----PQKPGSATFPFFGVQPVIVDEKGVEIE--G 589 (778)
Q Consensus 518 Ge~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~--~----~~~~~~~G~p~~g~~~~Ivd~~g~~~~--~ 589 (778)
|+++++++++++.+.++ +++++.||+||++...+...+.. . .....+.|++.++++++|+|+ +++++ .
T Consensus 307 G~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~ 382 (576)
T PRK05620 307 GSAVPPILIKAWEERYG---VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTD 382 (576)
T ss_pred CCCCCHHHHHHHHHHhC---CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCC
Confidence 99999999999988886 68999999999987544322111 0 012347899999999999997 77764 4
Q ss_pred CeeeEEEEecCCCcccccccCChhhh----hhhcc----------CCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCc
Q 004034 590 ECSGYLCIKSSWPGAFRTLYGDHERY----ETTYF----------KPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSG 655 (778)
Q Consensus 590 g~~GEL~v~g~~p~v~~gY~~~~~~~----~~~~~----------~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G 655 (778)
+..|||+++| +.+++|||++++.+ ...|. ...+|||+|||++++++||+++|+||.||+||++|
T Consensus 383 ~~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G 460 (576)
T PRK05620 383 RNEGEIQVRG--NWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGG 460 (576)
T ss_pred CCceEEEEEc--CcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCC
Confidence 6789999999 88999999998765 22221 01267999999999999999999999999999999
Q ss_pred eeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCC
Q 004034 656 HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPK 735 (778)
Q Consensus 656 ~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~ 735 (778)
++|+|.|||++|.+||.|.+|+|++.+++..++.++++|++.++...++...++|+++++++|+.|++|+.|+++++||+
T Consensus 461 ~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~ 540 (576)
T PRK05620 461 EWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDK 540 (576)
T ss_pred EEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCC
Confidence 99999999999999999999999999998888899999998876544333468999999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHhcc
Q 004034 736 TRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 736 T~sGKi~R~~L~~~~~~~ 753 (778)
|.+||++|++|++++.+.
T Consensus 541 t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 541 TSVGKFDKKDLRQHLADG 558 (576)
T ss_pred CCcccCcHHHHHHHHhcC
Confidence 999999999999998854
No 56
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-66 Score=599.42 Aligned_cols=492 Identities=23% Similarity=0.335 Sum_probs=397.1
Q ss_pred HhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeC
Q 004034 208 RNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 287 (778)
Q Consensus 208 ~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl 287 (778)
.+++ .+|+++|+++.+ .++++||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|++++|+
T Consensus 5 ~~a~-~~p~~~a~~~~~----~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 5 THAQ-IAPDRPAVIVAE----TGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhh-hCCCCcEEEecC----CCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 3555 799999998742 25789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccc
Q 004034 288 FAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIW 367 (778)
Q Consensus 288 ~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 367 (778)
++.++.+++.+++++++++++++++... ....+. . ......+.+.... .....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~-~------~~~~~~~~~~~~~-----------~~~~~ 132 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALD---------GLAAKV-G------ADLPLRLSFGGEI-----------DGFGS 132 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhh---------hHHHHh-h------hccceEEEecCcc-----------ccccc
Confidence 9999999999999999999999876431 111110 0 0111112111100 00111
Q ss_pred hhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEE--ccchHHHH---HHHHHHHhhCCCCCcEEEEeCCcchhh
Q 004034 368 WQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLH--TTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWIT 442 (778)
Q Consensus 368 ~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~--th~~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~ 442 (778)
+++...... + ......++++|+|||||||.||||++ +|.++... ........+++..+|+++..+|++|..
T Consensus 133 ~~~~~~~~~---~-~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~ 208 (501)
T PRK13390 133 FEAALAGAG---P-RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAA 208 (501)
T ss_pred HHHHhcccC---C-CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhh
Confidence 222211110 0 01122357999999999999999996 45553321 112223457888999999999999988
Q ss_pred hhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCC
Q 004034 443 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPIN 522 (778)
Q Consensus 443 g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~ 522 (778)
++.+. +..+..|+++++.+. +++..+++.|+++++|++.++|+++..|+..........+++++|.++++|++++
T Consensus 209 ~~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~ 283 (501)
T PRK13390 209 PLRWC-SMVHALGGTVVLAKR----FDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCP 283 (501)
T ss_pred HHHHH-HHHHhcCceEEEcCC----cCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCC
Confidence 75443 345778999988753 4889999999999999999999999999875433233456789999999999999
Q ss_pred HHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCC
Q 004034 523 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP 602 (778)
Q Consensus 523 ~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p 602 (778)
+++.+.+.+.++ .++++.||+||+++++..... .....++++|+|+++ .++|+|+++++++.|+.|||+|++ +
T Consensus 284 ~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~Gel~v~~--~ 356 (501)
T PRK13390 284 VDVKHAMIDWLG---PIVYEYYSSTEAHGMTFIDSP-DWLAHPGSVGRSVLG-DLHICDDDGNELPAGRIGTVYFER--D 356 (501)
T ss_pred HHHHHHHHHhcC---CceeeeecccccCceEEecch-hhccCCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEec--C
Confidence 999999998876 579999999999875443221 122456789999999 799999999999999999999999 8
Q ss_pred cccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEe
Q 004034 603 GAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVE 682 (778)
Q Consensus 603 ~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~ 682 (778)
+++.||+++++.+...+....+|||+|||+|++|+||+++|.||.||+||++|++|+|.|||++|.+||.|.|++|++++
T Consensus 357 ~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~ 436 (501)
T PRK13390 357 RLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVP 436 (501)
T ss_pred CccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEecc
Confidence 99999999999988877654578999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 683 HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 683 ~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
++..++.++++|++.++...+++..++|+++++++|+.|++|..++++++||+|++||++|++|+
T Consensus 437 ~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 437 DPEMGEQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred CcccCceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 98888999999998866544445567999999999999999999999999999999999999984
No 57
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.4e-66 Score=597.81 Aligned_cols=507 Identities=27% Similarity=0.375 Sum_probs=428.3
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
+++++|.++++ .+|+++|+.+. ++.+||+||+++++++|+.|.+.|+++|++|+|+++|++++++++|||+++
T Consensus 7 ~l~~~l~~~~~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~ 79 (521)
T PRK06187 7 TIGRILRHGAR-KHPDKEAVYFD------GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKI 79 (521)
T ss_pred CHHHHHHHHHH-HCCCceEEEeC------CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 58899999998 89999999987 567999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++..+++.+++++++++.... ..+....+.+ +.++.++.++.... . .
T Consensus 80 G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~----~--~ 140 (521)
T PRK06187 80 GAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFV---------PLLAAILPQL----PTVRTVIVEGDGPA----A--P 140 (521)
T ss_pred CeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHH---------HHHHHHhhcc----CCccEEEEecCccc----c--c
Confidence 99999999999999999999999999999987532 2333333322 33445555543321 0 0
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
.......+.+.+...+...+.....++++++|+|||||||.||+|.++|++++.. .......+++.++|++++.+|++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~~~~~~~~~ 219 (521)
T PRK06187 141 LAPEVGEYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLH-SLAVCAWLKLSRDDVYLVIVPMFH 219 (521)
T ss_pred cccccccHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHH-HHHHHHhhCCCCCCEEEEeCCchH
Confidence 1112233444444433333344567789999999999999999999999995544 444555789999999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
..++... +.++..|+++++++. .++..+++.++++++|.++++|++++.|.+.... ...++++||.+++|||+
T Consensus 220 ~~~~~~~-~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~l~~v~~~Ge~ 292 (521)
T PRK06187 220 VHAWGLP-YLALMAGAKQVIPRR----FDPENLLDLIETERVTFFFAVPTIWQMLLKAPRA--YFVDFSSLRLVIYGGAA 292 (521)
T ss_pred HhhHHHH-HHHHHhCCEEEecCC----CCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCC--CccCcchhhEEEEcCcC
Confidence 8875444 459999999999865 2889999999999999999999999999987653 34577899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCC----CCCCCCcCcCcCCceEEEECCCCceeCC--CeeeE
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAW----PQKPGSATFPFFGVQPVIVDEKGVEIEG--ECSGY 594 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~----~~~~~~~G~p~~g~~~~Ivd~~g~~~~~--g~~GE 594 (778)
+++++++++.+.++ +++++.||+||++.+......... .....++|+|++++.++|+|+++++++. |+.||
T Consensus 293 l~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~Ge 369 (521)
T PRK06187 293 LPPALLREFKEKFG---IDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEVGE 369 (521)
T ss_pred CCHHHHHHHHHHhC---cchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCeeE
Confidence 99999999999885 789999999999876554332211 1256789999999999999999999998 99999
Q ss_pred EEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccc
Q 004034 595 LCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCA 674 (778)
Q Consensus 595 L~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ 674 (778)
|++++ +.++.||+++++.+...+. +|||+|||+++++++|++++.||.||+||++|.+|+|.+||++|.++++|.
T Consensus 370 l~v~~--~~~~~~y~~~~~~~~~~~~---~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~ 444 (521)
T PRK06187 370 IIVRG--PWLMQGYWNRPEATAETID---GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVA 444 (521)
T ss_pred EEEEC--cchhhhhcCCHHHHHHHhh---CCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCce
Confidence 99999 8999999999987777653 569999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 675 EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 675 ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
+++|++++++..++.++++++++++...+ .++++++++++|+.+++|..|+++++||+|++||++|+.|++++.+
T Consensus 445 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 445 EVAVIGVPDEKWGERPVAVVVLKPGATLD---AKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAE 519 (521)
T ss_pred EEEEEeccCCCcCceEEEEEEECCCCCCC---HHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhc
Confidence 99999998887789999999988765443 5789999999999999999999999999999999999999999863
No 58
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2.7e-66 Score=598.77 Aligned_cols=508 Identities=22% Similarity=0.319 Sum_probs=416.2
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
+++++|+++++ ++||++|+++.+.+ +..+.+||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++
T Consensus 8 ~l~~~~~~~a~-~~p~~~a~~~~~~~-~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~ 85 (517)
T PRK08008 8 HLRQMWDDLAD-VYGHKTALIFESSG-GVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKI 85 (517)
T ss_pred cHHHHHHHHHH-HCCCceEEEcccCC-CccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 58899999998 89999999986432 34588999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++.+++++++++++++.+... ..+.+..... ...++.++..+.... .
T Consensus 86 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~~----~--- 146 (517)
T PRK08008 86 GAIMVPINARLLREESAWILQNSQASLLVTSAQFY---------PMYRQIQQED---ATPLRHICLTRVALP----A--- 146 (517)
T ss_pred CeEEEEcCcccCHHHHHHHHHhcCceEEEEecchh---------HHHHHHHhhc---cccCcEEEEecCCCc----c---
Confidence 99999999999999999999999999999987542 2233322221 133444544433210 0
Q ss_pred CCCcccchhhccCCCCC-CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcc
Q 004034 361 QDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
......+.+....... ........++++++|+|||||||.||||+++|++++.. .........+.+++++++..|++
T Consensus 147 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~p~~ 224 (517)
T PRK08008 147 -DDGVSSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFA-GYYSAWQCALRDDDVYLTVMPAF 224 (517)
T ss_pred -cccccCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHH-HHHHhhhcCCCCCCeEEEecCcH
Confidence 0011223222221111 11123346789999999999999999999999996533 22223344677899999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|..++...++.++..|+++++.+. +++..+++.++++++|++.++|++++.++...... .....+++.++++ .
T Consensus 225 ~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~~~~l~~~~~~-~ 297 (517)
T PRK08008 225 HIDCQCTAAMAAFSAGATFVLLEK----YSARAFWGQVCKYRATITECIPMMIRTLMVQPPSA--NDRQHCLREVMFY-L 297 (517)
T ss_pred HHHHHHHHHHHHHhcCcEEEEccc----cCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcc--ccccccceeeEEe-c
Confidence 988877888999999999999864 48899999999999999999999999988764321 1234578887775 5
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEec
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g 599 (778)
+++++.+.++.+.++ +++++.||+||++...+...... .....++|.|+++++++|+|+++++++.|+.|||+++|
T Consensus 298 ~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~v~g 373 (517)
T PRK08008 298 NLSDQEKDAFEERFG---VRLLTSYGMTETIVGIIGDRPGD-KRRWPSIGRPGFCYEAEIRDDHNRPLPAGEIGEICIKG 373 (517)
T ss_pred CCCHHHHHHHHHHhC---CeEEeeccccccccccccCCccc-cccCCccccCCCCcEEEEECCCCCCCCCCCcceEEEeC
Confidence 889999999988886 78999999999987555443322 34567899999999999999999999999999999998
Q ss_pred C-CCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEE
Q 004034 600 S-WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 678 (778)
Q Consensus 600 ~-~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~V 678 (778)
+ .+++++|||++++.+.+.+.. +|||+|||+|++|+||+++++||.||+||++|++|+|.|||++|.+||.|.+++|
T Consensus 374 ~~~~~~~~gy~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v 451 (517)
T PRK08008 374 VPGKTIFKEYYLDPKATAKVLEA--DGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVV 451 (517)
T ss_pred CCCcchhhhHhCChHHHhhcccC--CCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEE
Confidence 3 258999999999988777643 6899999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 679 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 679 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
++++++..++.+.++|+++++...+ .++|++++++++++|++|..++++++||+|++||++|+.|+
T Consensus 452 ~g~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 452 VGIKDSIRDEAIKAFVVLNEGETLS---EEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred EccCCCCCCceEEEEEEECCCCCCC---HHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 9999888888999999998765443 57899999999999999999999999999999999999874
No 59
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=3.2e-66 Score=596.07 Aligned_cols=497 Identities=25% Similarity=0.350 Sum_probs=413.3
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
.+.++|..++ .+|+++|+.+.+ ++.+||.||.++++++|++|+++|+++||+|+++++|++++++++|||+++
T Consensus 4 ~l~~~~~~~~--~~~~~~a~~~~~-----~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~ 76 (504)
T PRK07514 4 NLFDALRAAF--ADRDAPFIETPD-----GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRA 76 (504)
T ss_pred cHHHHHHHHh--hCCCCeEEEeCC-----CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 3567777766 489999998742 678999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++..+++.++++++++++.... .+...... .....++.++....
T Consensus 77 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~-----~~~~~~~~~~~~~~-------- 134 (504)
T PRK07514 77 GAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFA---------WLSKIAAA-----AGAPHVETLDADGT-------- 134 (504)
T ss_pred CcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhH---------HHHHhhhc-----cCCceEEEecCCCc--------
Confidence 999999999999999999999999999999865421 11111111 12222333332110
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
..+.+.....+.........++++++|+|||||||.||+|+++|++++.. .......+++.++|++++..|+.|
T Consensus 135 -----~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~-~~~~~~~~~~~~~d~~l~~~p~~~ 208 (504)
T PRK07514 135 -----GSLLEAAAAAPDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSN-ALTLVDYWRFTPDDVLIHALPIFH 208 (504)
T ss_pred -----ccHHHhhhhcCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHH-HHHHHHHhCCCCccEEEEecchHH
Confidence 00111111112222233456899999999999999999999999995544 445556788999999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
..++.+.++.+++.|+++++.+. .++..+++.+ .++|++.++|+++..+++... .....++++|.+++||++
T Consensus 209 ~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gg~~ 280 (504)
T PRK07514 209 THGLFVATNVALLAGASMIFLPK----FDPDAVLALM--PRATVMMGVPTFYTRLLQEPR--LTREAAAHMRLFISGSAP 280 (504)
T ss_pred HHHHHHHHHHHHhcCcEEEECCC----CCHHHHHHHH--HhheeeecHHHHHHHHHcCCC--CCcccccceeeEEecCCC
Confidence 98877788899999999999854 4789999999 479999999999999987643 233467899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEEC-CCCceeCCCeeeEEEEec
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGECSGYLCIKS 599 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd-~~g~~~~~g~~GEL~v~g 599 (778)
+++++++++.+.++ +++++.||+||++........ .....+++|.|+++++++|+| +++++++.|+.|||+|+|
T Consensus 281 ~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~--~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~ 355 (504)
T PRK07514 281 LLAETHREFQERTG---HAILERYGMTETNMNTSNPYD--GERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKG 355 (504)
T ss_pred CCHHHHHHHHHHhC---CcceeecccccccccccCCcc--ccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEec
Confidence 99999999999886 679999999999865443221 123467899999999999999 789999999999999999
Q ss_pred CCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEE
Q 004034 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 679 (778)
Q Consensus 600 ~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv 679 (778)
|+++.||+++++.+...|.. +|||+|||+++++++|+++++||.||+||++|++|+|.|||++|.++++|.+++|+
T Consensus 356 --~~~~~gy~~~~~~~~~~~~~--~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~ 431 (504)
T PRK07514 356 --PNVFKGYWRMPEKTAEEFRA--DGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVI 431 (504)
T ss_pred --CCccccccCCchhhhhhccc--CCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEE
Confidence 89999999999888776643 67999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 680 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 680 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
+++++..++.++++++..++...+ .++|+++++++|+.+++|..|+++++||+|++||++|++|++++.+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~ 501 (504)
T PRK07514 432 GVPHPDFGEGVTAVVVPKPGAALD---EAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYAD 501 (504)
T ss_pred eCCCCCcCceEEEEEEECCCCCCC---HHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHh
Confidence 999887788999999987655433 4689999999999999999999999999999999999999998764
No 60
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-66 Score=595.05 Aligned_cols=479 Identities=26% Similarity=0.362 Sum_probs=403.4
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++++.|+++++ .+||++|+++. .+.+||.||+++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 3 ~~~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (483)
T PRK03640 3 TMPNWLKQRAF-LTPDRTAIEFE------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQL 75 (483)
T ss_pred cHHHHHHHHHH-hCCCceEEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhC
Confidence 46788999998 89999999976 589999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++..++++++++++++++..... .... .. +.
T Consensus 76 G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~-------------~~~~----~~----~~-------------- 120 (483)
T PRK03640 76 GAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAK-------------LIPG----IS----VK-------------- 120 (483)
T ss_pred CcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHH-------------Hhhh----cc----cc--------------
Confidence 9999999999999999999999999999997653210 0000 00 00
Q ss_pred CCCcccchhhccCC-CCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcc
Q 004034 361 QDGRDIWWQDVVPK-YPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 361 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
+.+.... ...........++++++|+|||||||.||+|+++|++++..... ....+++.++|++++.+|++
T Consensus 121 -------~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~-~~~~~~~~~~d~~l~~~p~~ 192 (483)
T PRK03640 121 -------FAELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVG-SALNLGLTEDDCWLAAVPIF 192 (483)
T ss_pred -------HHHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHH-HHHhcCCCcCcEEEEecCHH
Confidence 0000000 00111122346789999999999999999999999996554433 44457899999999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|+.++ ..++.+|..|+++++.+. .++..+++.++++++|++.++|+++..|.+..... ....+||.+++||+
T Consensus 193 ~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~---~~~~~lr~~~~~g~ 264 (483)
T PRK03640 193 HISGL-SILMRSVIYGMRVVLVEK----FDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG---TYPSSFRCMLLGGG 264 (483)
T ss_pred HHHHH-HHHHHHHhcCCEEEecCC----CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc---ccCCcceEEEEcCC
Confidence 99885 457889999999999864 48999999999999999999999999998654321 23468999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEec
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g 599 (778)
++++.+.+++.+. + +++++.||+||++...+..........++++|+|+++++++|+|+ +++++.|+.|||+|+|
T Consensus 265 ~~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~-~~~~~~g~~Gel~v~g 339 (483)
T PRK03640 265 PAPKPLLEQCKEK-G---IPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD-GVVVPPFEEGEIVVKG 339 (483)
T ss_pred CCCHHHHHHHHHh-C---CCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecC-CCcCCCCCceEEEEEC
Confidence 9999999888764 4 789999999998764332222222346789999999999999985 4899999999999999
Q ss_pred CCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEE
Q 004034 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 679 (778)
Q Consensus 600 ~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv 679 (778)
|+++.||+++++.+...+. +|||+|||++++++||+++++||+||++|++|.+|++.|||++|.++|+|.+++|+
T Consensus 340 --~~~~~gy~~~~~~~~~~~~---~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~ 414 (483)
T PRK03640 340 --PNVTKGYLNREDATRETFQ---DGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVV 414 (483)
T ss_pred --cchhhhhcCCHHHHHHHHh---cCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 8999999999988777652 68999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 680 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 680 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
+.+++..++.++++++..... + .+++++++++.|++|++|..|+++++||+|++||++|++|++++.+
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~--~---~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 415 GVPDDKWGQVPVAFVVKSGEV--T---EEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred eCCCcccCCceEEEEEeCCCC--C---HHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 998887788888988865433 2 4678999999999999999999999999999999999999998863
No 61
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=6e-66 Score=601.61 Aligned_cols=519 Identities=21% Similarity=0.286 Sum_probs=422.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++|+++|+++.+ ..+.+||+||.++++++|+.|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 17 ~l~~~l~~~~~-~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 91 (559)
T PRK08315 17 TIGQLLDRTAA-RYPDREALVYRD----QGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKI 91 (559)
T ss_pred cHHHHHHHHHH-HCCCCeEEEEcC----CCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 57899999998 899999999853 2578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHh---------hcCCCccEEEEEccCC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECA---------KSGISVDVCLTYENQS 351 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~vi~~~~~~ 351 (778)
|++++|++|.++.+++..++++++++++|++++.... .....+.+....+. ...+....++.++...
T Consensus 92 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (559)
T PRK08315 92 GAILVTINPAYRLSELEYALNQSGCKALIAADGFKDS----DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK 167 (559)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCCCEEEEecccccc----chHHHHHHhhhhhhcccccccccccCCCceeEEeecccC
Confidence 9999999999999999999999999999998764321 01111111111110 0001122233222211
Q ss_pred ccccccccCCCCcccchhhccCCC------CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC
Q 004034 352 AMTRENTKWQDGRDIWWQDVVPKY------PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (778)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (778)
. .....|.+..... ..........++++++|+|||||||.||||.++|++++ .........++
T Consensus 168 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~-~~~~~~~~~~~ 236 (559)
T PRK08315 168 H----------PGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNIL-NNGYFIGEAMK 236 (559)
T ss_pred C----------cccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHH-HHHHHHHHhcC
Confidence 0 0011222221110 00112233567889999999999999999999999965 44445566788
Q ss_pred CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccccc
Q 004034 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (778)
Q Consensus 426 ~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~ 505 (778)
+.++|+++...|+.|..++...++.+|..|+++++... .+++..+++.++++++|+++++|+++..++..... ..
T Consensus 237 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~---~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~--~~ 311 (559)
T PRK08315 237 LTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE---GFDPLATLAAVEEERCTALYGVPTMFIAELDHPDF--AR 311 (559)
T ss_pred CCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecC---CCCHHHHHHHHHHcCCeEEecchHHHHHHHhCccc--CC
Confidence 99999999999999999888888999999999996543 25899999999999999999999999988876542 33
Q ss_pred CCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC-CCCCCCCcCcCcCCceEEEECCC-
Q 004034 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPFFGVQPVIVDEK- 583 (778)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~-~~~~~~~~G~p~~g~~~~Ivd~~- 583 (778)
.++++||.++++||++++++++.+.+.++. .++++.||+||++.+++...... ...++.++|+|++++.++|+|++
T Consensus 312 ~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~--~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~ 389 (559)
T PRK08315 312 FDLSSLRTGIMAGSPCPIEVMKRVIDKMHM--SEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPET 389 (559)
T ss_pred CCchhhheeEecCCCCCHHHHHHHHHHcCC--cceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCcc
Confidence 467899999999999999999999998873 45999999999987654332211 12356789999999999999987
Q ss_pred CceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHH
Q 004034 584 GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEV 663 (778)
Q Consensus 584 g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eI 663 (778)
+++++.|+.|||+|+| +++++||+++++.+...+.. ++||+|||++++++||+++|+||.||+||++|++|+|.||
T Consensus 390 ~~~~~~g~~GEl~v~g--~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eI 465 (559)
T PRK08315 390 GETVPRGEQGELCTRG--YSVMKGYWNDPEKTAEAIDA--DGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREI 465 (559)
T ss_pred CCcCCCCCceEEEEEC--chhhhhhcCChhHHhhcCCC--CCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHH
Confidence 9999999999999999 89999999999877665533 6799999999999999999999999999999999999999
Q ss_pred HHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccH
Q 004034 664 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMR 743 (778)
Q Consensus 664 E~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R 743 (778)
|++|.++|+|.+++|++++++..++.+++||++..+...+ .++++++++++||.|++|..|+++++||+|++||++|
T Consensus 466 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r 542 (559)
T PRK08315 466 EEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATLT---EEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQK 542 (559)
T ss_pred HHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCCC---HHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeH
Confidence 9999999999999999999887788899999987654433 5689999999999999999999999999999999999
Q ss_pred HHHHHHHhcc
Q 004034 744 RILRKIASRQ 753 (778)
Q Consensus 744 ~~L~~~~~~~ 753 (778)
++|++++...
T Consensus 543 ~~L~~~~~~~ 552 (559)
T PRK08315 543 FKMREMMIEE 552 (559)
T ss_pred HHHHHHHHhh
Confidence 9999987653
No 62
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.9e-67 Score=626.75 Aligned_cols=500 Identities=20% Similarity=0.266 Sum_probs=393.9
Q ss_pred HHHHHHHHhhhccCCC-eEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGD-KVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd-~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
+++++|+++++ ++|+ ++|+... ..+++||+||.++++++|++|++. +++||+|+|+++|++|+++++|||++
T Consensus 205 t~~~~l~~~~~-~~p~~~~a~~~~-----~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~ 277 (718)
T PRK08043 205 TLYEALLSAQY-RYGAGKPCIEDV-----NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASL 277 (718)
T ss_pred CHHHHHHHHHH-HhCCCCcceEcC-----CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHH
Confidence 36788999888 8998 5787642 147899999999999999999987 59999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccccc
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (778)
+|++++|+++.++.+++++++++++++++|++++.....+...+ ...+ ..+. ++.+++... ...
T Consensus 278 ~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~-------~~~~----~~~~-~i~~~~~~~----~~~ 341 (718)
T PRK08043 278 RRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHL-------PEQL----TQVR-WVYLEDLKD----DVT 341 (718)
T ss_pred cCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCCh-------hhhh----cccc-EEEhhhhhh----hcc
Confidence 99999999999999999999999999999997654211000000 0001 1111 222221100 000
Q ss_pred CCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcc
Q 004034 360 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
... ......+... + ........++|+++|+|||||||.||||+++|++++.+ .......+++.++|++++.+|++
T Consensus 342 ~~~-~~~~~~~~~~--~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~-~~~~~~~~~~~~~d~~l~~~Pl~ 416 (718)
T PRK08043 342 TAD-KLWIFAHLLM--P-RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLAN-VEQIKTIADFTPNDRFMSALPLF 416 (718)
T ss_pred hhH-HHHHHHHHhC--C-ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHH-HHHHHHhhCCCccCeEEEcCcch
Confidence 000 0000000000 0 01112346799999999999999999999999996544 44455667899999999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|..++...++.+|..|+++++.+.. .++..+++.+.++++|+++.+|+++..+.+.. ...++++||.+++|||
T Consensus 417 h~~g~~~~~~~~l~~G~~vv~~~~~---~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~----~~~~~~~lr~i~~gg~ 489 (718)
T PRK08043 417 HSFGLTVGLFTPLLTGAEVFLYPSP---LHYRIVPELVYDRNCTVLFGTSTFLGNYARFA----NPYDFARLRYVVAGAE 489 (718)
T ss_pred hhhhhHHHHHHHHHcCCEEEEeCCc---ccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc----CcccccceEEEEEeCc
Confidence 9998877889999999999998642 35678899999999999999999998876642 2346789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEec
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g 599 (778)
++++++.+++.+.+| +++++.||+||++.+.+...+. ..+++++|+|++|++++|+|+++. ++.|||+++|
T Consensus 490 ~l~~~~~~~~~~~~g---~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d~~~~----~~~Gel~v~g 560 (718)
T PRK08043 490 KLQESTKQLWQDKFG---LRILEGYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLSVPGI----EQGGRLQLKG 560 (718)
T ss_pred cCCHHHHHHHHHHcC---CCeecccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEecCCCC----CCceEEEEec
Confidence 999999999998886 7899999999998765543322 245789999999999999997653 4569999999
Q ss_pred CCCcccccccC--Chhhhhhhcc-----CCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCc
Q 004034 600 SWPGAFRTLYG--DHERYETTYF-----KPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 672 (778)
Q Consensus 600 ~~p~v~~gY~~--~~~~~~~~~~-----~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~ 672 (778)
|+++.|||+ +++.+..... ...+|||+|||+|++|+||+++|+||+||+||++|++|+|.|||++|.+|+.
T Consensus 561 --~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~ 638 (718)
T PRK08043 561 --PNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSP 638 (718)
T ss_pred --CCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCc
Confidence 899999998 4442111100 0126899999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhh-cCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 673 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 673 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
+.+++|++.+++..++.++++++. ...+ .++|+++++++ |+.|++|..|+++++||+|++|||||++|++++.
T Consensus 639 ~~~~avv~~~~~~~ge~~v~~~~~---~~~~---~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~ 712 (718)
T PRK08043 639 DKQHATAIKSDASKGEALVLFTTD---SELT---REKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVD 712 (718)
T ss_pred cceEEEEEccCCCCCceEEEEEcC---cccC---HHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHh
Confidence 999999999888888888888742 2222 46799999987 9999999999999999999999999999999876
Q ss_pred c
Q 004034 752 R 752 (778)
Q Consensus 752 ~ 752 (778)
+
T Consensus 713 ~ 713 (718)
T PRK08043 713 E 713 (718)
T ss_pred c
Confidence 4
No 63
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-66 Score=599.63 Aligned_cols=511 Identities=21% Similarity=0.263 Sum_probs=411.8
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+.++. .+|+++++.+... +..+.+||.||.++++++|++|.++|+++||+|+++++|++++++++|||+++
T Consensus 11 ~~~~~l~~~~~-~~~~~~~~~~~~~--~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 11 LISSLIAHAAR-HAGDTEIVSRRVE--GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CHHHHHHHHHh-hCCCceEEEeecc--CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 47788998887 7888888765311 22478999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++.+++++++++++++++... +.+.+....+ ..+..++.+.+... ...
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~ 149 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFL---------PLVDALAPQC----PNVKGWVAMTDAAH-----LPA 149 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhH---------HHHHHHHhhC----CCceEEEEEccCCc-----ccc
Confidence 99999999999999999999999999999886542 2233322222 33444444433211 000
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHH-HHHHHhhCCCCCcEEEEeCCcc
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA-TTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
.....+.|++...............++++++|+|||||||.||||+++|++++.+.. ......+++.++|++++..|++
T Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 229 (539)
T PRK07008 150 GSTPLLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMF 229 (539)
T ss_pred CCcccccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchH
Confidence 011123444443322222223345678999999999999999999999999654332 2233457788899999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|..++ ..++.++..|+++++.... +++..++++++++++|++..+|+++..|++.... ...++++||.++++|+
T Consensus 230 h~~~~-~~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~~~G~ 303 (539)
T PRK07008 230 HVNAW-GLPYSAPLTGAKLVLPGPD---LDGKSLYELIEAERVTFSAGVPTVWLGLLNHMRE--AGLRFSTLRRTVIGGS 303 (539)
T ss_pred HhhhH-HHHHHHHhcCceEEEecCC---cCHHHHHHHHHHcCCEEEEechHHHHHHHhcccc--cCCCcccceEEEEcCC
Confidence 87763 3457789999999987532 4889999999999999999999999999876542 2456789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC---------CCCCCCCcCcCcCCceEEEECCCCceeCCC
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---------WPQKPGSATFPFFGVQPVIVDEKGVEIEGE 590 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~---------~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g 590 (778)
++++++++++.+.++ +++++.||+||++...+...... ......++|+|+++++++|+|+++++++.+
T Consensus 304 ~l~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~ 380 (539)
T PRK07008 304 ACPPAMIRTFEDEYG---VEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWD 380 (539)
T ss_pred CCCHHHHHHHHHHhC---CceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCC
Confidence 999999999999886 68999999999986543221100 001245789999999999999999888753
Q ss_pred --eeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHh
Q 004034 591 --CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALV 668 (778)
Q Consensus 591 --~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~ 668 (778)
+.|||+++| |.++.||+++++. . +. +|||+|||++++|+||+++++||.||+||++|++|+|.|||++|.
T Consensus 381 ~~~~Gei~v~g--~~~~~gy~~~~~~---~-~~--~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 452 (539)
T PRK07008 381 GKAFGDLQVRG--PWVIDRYFRGDAS---P-LV--DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAV 452 (539)
T ss_pred CCcceEEEEeC--CccchhhcCChhh---h-hc--CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHH
Confidence 579999999 8899999999832 2 22 689999999999999999999999999999999999999999999
Q ss_pred cCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHH
Q 004034 669 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 748 (778)
Q Consensus 669 ~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~ 748 (778)
+||.|.+++|++++++..++.++++|+..++...+ .++|+++++++|++|++|+.|+++++||+|++||++|++|++
T Consensus 453 ~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~ 529 (539)
T PRK07008 453 AHPAVAEAACIACAHPKWDERPLLVVVKRPGAEVT---REELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLRE 529 (539)
T ss_pred hCCceeEEEEEecCCchhccceEEEEEeCCCCccC---HHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHH
Confidence 99999999999999887788899999887654433 578999999999999999999999999999999999999999
Q ss_pred HHhc
Q 004034 749 IASR 752 (778)
Q Consensus 749 ~~~~ 752 (778)
++.+
T Consensus 530 ~~~~ 533 (539)
T PRK07008 530 QFRD 533 (539)
T ss_pred HHHh
Confidence 8874
No 64
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4.5e-66 Score=595.59 Aligned_cols=507 Identities=28% Similarity=0.406 Sum_probs=421.7
Q ss_pred cccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHH
Q 004034 198 ITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 277 (778)
Q Consensus 198 ~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~ 277 (778)
.+|.+++++++++...+||++|++.. .+.+||.||.++++++|++|++.|+++|++|+++++|+++++++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~p~~~a~~~~------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~ 75 (508)
T TIGR02262 2 KYNAAEDLLDRNVVEGRGGKTAFIDD------ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGA 75 (508)
T ss_pred cchHHHHHHHHHHhcccCCceEEEeC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 35789999998743279999999865 678999999999999999999999999999999999999999999999
Q ss_pred HHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccc
Q 004034 278 ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN 357 (778)
Q Consensus 278 l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 357 (778)
+++|++++|+++.++.+++.++++.++++++|+++... ..+.+....+ +....++..+...
T Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~------ 136 (508)
T TIGR02262 76 IRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL---------PVIKAALGKS----PHLEHRVVVGRPE------ 136 (508)
T ss_pred HHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH---------HHHHHHHhcC----CCccEEEEeCCCC------
Confidence 99999999999999999999999999999999986532 2222222222 3344444433211
Q ss_pred ccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCC
Q 004034 358 TKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTAD 437 (778)
Q Consensus 358 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 437 (778)
.....+.+..........+....++++++|+|||||||.||||+++|+++...........+++.++|+++...|
T Consensus 137 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 211 (508)
T TIGR02262 137 -----AGEVQLAELLATESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAK 211 (508)
T ss_pred -----cccccHHHHhhcCCCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCc
Confidence 011222222222222222334567899999999999999999999999966554433455678999999999999
Q ss_pred cchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEe
Q 004034 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 517 (778)
Q Consensus 438 ~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~g 517 (778)
++|+.++...++.++..|+++++.++. +++..+++.|+++++|.+.++|+++..++.... .......++|.++++
T Consensus 212 ~~~~~~~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~--~~~~~~~~l~~~~~~ 286 (508)
T TIGR02262 212 LFFAYGLGNALTFPMSVGATTVLMGER---PTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPN--LPAEDQVRLRLCTSA 286 (508)
T ss_pred hHHHHHHHHHHHHHHHcCceEEEeCCC---CCHHHHHHHHHHHCCcEEecchHHHHHHhcCcc--ccccccccceeEEEc
Confidence 999988777788899999999998643 478999999999999999999999988876543 222346789999999
Q ss_pred cCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEE
Q 004034 518 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCI 597 (778)
Q Consensus 518 Ge~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v 597 (778)
|+++++++++.|.+.++ +++++.||+||++.+.+..... ....+++|+|++|+.++|+|+++++++.|+.|||+|
T Consensus 287 G~~l~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~Gel~i 361 (508)
T TIGR02262 287 GEALPAEVGQRWQARFG---VDIVDGIGSTEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPGELLI 361 (508)
T ss_pred CCCCCHHHHHHHHHHhC---CchhhCccccccCceeecCCcc--CCCCCCcCCCCCCcEEEEECCCCCCCCCCCeeEEEE
Confidence 99999999999999886 6899999999998755433221 235678999999999999999999999999999999
Q ss_pred ecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEE
Q 004034 598 KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAA 677 (778)
Q Consensus 598 ~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~ 677 (778)
+| +.++.||+++++.+...+. +|||+|||++++++||.++++||.||+||++|.+|+|.|||++|.+||+|.+++
T Consensus 362 ~~--~~~~~gY~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~ 436 (508)
T TIGR02262 362 SG--PSSATMYWNNRAKTRDTFQ---GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAA 436 (508)
T ss_pred ec--CccccccCCCHHHhHhhhh---cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEE
Confidence 99 8999999999988776552 589999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHH
Q 004034 678 VVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKI 749 (778)
Q Consensus 678 Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~ 749 (778)
+++.++....+.+.+|+++.++....+.+.++|+++++++|+++++|..++++++||+|++||++|+.|+++
T Consensus 437 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 437 VVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred EEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 999888777788999999876544333446889999999999999999999999999999999999998763
No 65
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.9e-67 Score=605.66 Aligned_cols=494 Identities=19% Similarity=0.189 Sum_probs=376.3
Q ss_pred ccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHH
Q 004034 199 TNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (778)
Q Consensus 199 ~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l 278 (778)
||-+.++|+++++ ++|+++|+++.+. +.++++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||+
T Consensus 1 ~~~~~~~l~~~~~-~~~~~~a~~~~~~--~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~ 75 (525)
T PRK05851 1 MNELAAALSDAMT-ASGRDLVVLDRES--GLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAW 75 (525)
T ss_pred CchHHHHHHHHhc-CCCCceEEeCCCC--CcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHH
Confidence 3556788888888 8999999987632 2358999999999999999999988 899999999999999999999999
Q ss_pred HhCCEEEeCCCC--------CCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccC
Q 004034 279 RIGAVHSVVFAG--------FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQ 350 (778)
Q Consensus 279 ~~Gav~vpl~p~--------~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~ 350 (778)
++|++++ ++|. ...+++.+++++++++++|+++... ..+.+. . ..+ .+.+.
T Consensus 76 ~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~---~----~~~----~~~~~ 134 (525)
T PRK05851 76 LAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHL---------ERLRAV---D----SSV----TVHDL 134 (525)
T ss_pred HcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHH---------HHHHHh---h----ccc----ccccc
Confidence 9999865 4442 2335667789999999999875431 111110 0 000 00000
Q ss_pred CccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCC-CC
Q 004034 351 SAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK-PS 429 (778)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~-~~ 429 (778)
. ..... ....+.....+++++||+|||||||+||||+++|++++.+ .......+++. ++
T Consensus 135 ~------------------~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~-~~~~~~~~~~~~~~ 194 (525)
T PRK05851 135 A------------------TAAHT-NRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSN-LRGLNARVGLDAAT 194 (525)
T ss_pred c------------------ccccc-cccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHH-HHHHHHHhCCCCCC
Confidence 0 00000 0000112246799999999999999999999999996544 44556678888 89
Q ss_pred cEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCC
Q 004034 430 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK 509 (778)
Q Consensus 430 d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~ 509 (778)
|++++++|++|++++ ..++.+|+.|+++++.+......++..+++.++++++|++..+|.++..+.+.... ....+++
T Consensus 195 d~~l~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~-~~~~~l~ 272 (525)
T PRK05851 195 DVGCSWLPLYHDMGL-AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARR-VSDVDLG 272 (525)
T ss_pred CeEEEcCCCccCccH-HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhcc-ccCCCHH
Confidence 999999999999986 46788999999999975322223678899999999999886666555555443221 2234678
Q ss_pred ceeEEEEecCCCCHHHHHHHHHH---hCCCCcceecccccccccceecccCCCC-------------CCCCCCCcCcCcC
Q 004034 510 SLRVLGSVGEPINPSAWRWFFNV---VGDSRCPISDTWWQTETGGFMITPLPGA-------------WPQKPGSATFPFF 573 (778)
Q Consensus 510 sLr~v~~gGe~l~~~~~~~~~~~---~g~~~~~i~~~YG~TE~g~~~~~~~~~~-------------~~~~~~~~G~p~~ 573 (778)
+||.+++||++++++++++|.+. +|.....+++.||+||++.+++...++. ...+.+++|+|++
T Consensus 273 ~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~ 352 (525)
T PRK05851 273 ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIP 352 (525)
T ss_pred HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCC
Confidence 99999999999999999998875 3422245999999999986554332210 1123468999999
Q ss_pred CceEEEECCCC-ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEE
Q 004034 574 GVQPVIVDEKG-VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 652 (778)
Q Consensus 574 g~~~~Ivd~~g-~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Ik 652 (778)
|++++|+|+++ .+++.|+.|||+|+| |++++|||++++.. .+|||+|||+|+++ +|+|+|+||.||+||
T Consensus 353 g~~v~i~d~~~~~~~~~g~~GEl~v~g--~~~~~GY~~~~~~~-------~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~ 422 (525)
T PRK05851 353 GMEVRISPGDGAAGVAGREIGEIEIRG--ASMMSGYLGQAPID-------PDDWFPTGDLGYLV-DGGLVVCGRAKELIT 422 (525)
T ss_pred CcEEEEECCCCCccCCCCCeEEEEEec--CchhhccccCCccC-------CCCceeccceEEEE-CCEEEEEeecCCEEE
Confidence 99999999876 468999999999999 89999999998532 26799999999996 899999999999999
Q ss_pred eCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECC-
Q 004034 653 VSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP- 731 (778)
Q Consensus 653 i~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~- 731 (778)
++|+||+|.|||++|.+||+|.+|+|++++++..++.+.++|+........+++.++++++|...+ +++|..+++++
T Consensus 423 ~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~l--~~~P~~~~~v~~ 500 (525)
T PRK05851 423 VAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGPDEAGARSEVVQRVASEC--GVVPSDVVFVAP 500 (525)
T ss_pred ECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecCcchHHHHHHHHHHHHHHh--CCCccEEEEECC
Confidence 999999999999999999999999999999887777777777654211111233344444444443 28999999998
Q ss_pred -CCCCCCCCcccHHHHHHHHhc
Q 004034 732 -GLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 732 -~lP~T~sGKi~R~~L~~~~~~ 752 (778)
+||+|++|||+|++|++.+.+
T Consensus 501 ~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 501 GSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred CCcCcCcchHHHHHHHHHHHHh
Confidence 899999999999999998753
No 66
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2.3e-66 Score=603.22 Aligned_cols=501 Identities=21% Similarity=0.306 Sum_probs=411.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|.++++ .+|+++|+++.. .++.+||+||.++++++|..|++.|+++||+|+++++|++++++++|||+++
T Consensus 29 ~~~~~l~~~a~-~~p~~~a~~~~~----~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 103 (546)
T PLN02330 29 TLPDFVLQDAE-LYADKVAFVEAV----TGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAA 103 (546)
T ss_pred cHHHHHhhhhh-cCCCccEEEecC----CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHh
Confidence 47788888888 899999998642 1478999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++.+++++++++++|+++..... ++.+ ... ++.++....
T Consensus 104 G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~-------------~~~~-----~~~-~i~~~~~~~-------- 156 (546)
T PLN02330 104 GGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGK-------------VKGL-----GLP-VIVLGEEKI-------- 156 (546)
T ss_pred CcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhh-------------Hhhc-----CCc-EEEecCCCC--------
Confidence 9999999999999999999999999999998764321 1111 111 233332110
Q ss_pred CCCcccchhhccCCCC---CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCC----CCcEEE
Q 004034 361 QDGRDIWWQDVVPKYP---TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK----PSDVYW 433 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~---~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~----~~d~~l 433 (778)
.....|.+.+.... ...+.....++++++|+|||||||.||||+++|++++.+... ..+++. ..++++
T Consensus 157 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~---~~~~~~~~~~~~~~~~ 231 (546)
T PLN02330 157 --EGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCS---SLFSVGPEMIGQVVTL 231 (546)
T ss_pred --CCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHH---HhhccCccccCceEEE
Confidence 01122443332211 111223445789999999999999999999999996554332 123333 346889
Q ss_pred EeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCC--ce
Q 004034 434 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK--SL 511 (778)
Q Consensus 434 ~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~--sL 511 (778)
...|++|..++...++.+|..|+++++.+. +++..+++.++++++|.+..+|+++..|++... ..+.++. ++
T Consensus 232 ~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--~~~~~~~~~~l 305 (546)
T PLN02330 232 GLIPFFHIYGITGICCATLRNKGKVVVMSR----FELRTFLNALITQEVSFAPIVPPIILNLVKNPI--VEEFDLSKLKL 305 (546)
T ss_pred EecChHHHHHHHHHHHHHhhcCCEEEEecc----cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcc--ccccccchhee
Confidence 999999998877778889999999999864 488999999999999999999999999987643 1222333 57
Q ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccC-C--CCCCCCCCCcCcCcCCceEEEEC-CCCcee
Q 004034 512 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-P--GAWPQKPGSATFPFFGVQPVIVD-EKGVEI 587 (778)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~-~--~~~~~~~~~~G~p~~g~~~~Ivd-~~g~~~ 587 (778)
|.++++||++++++++++.+.++ ++++++.||+||++.+..... + +.......++|+|++|++++|+| ++++++
T Consensus 306 ~~i~~~g~~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~ 383 (546)
T PLN02330 306 QAIMTAAAPLAPELLTAFEAKFP--GVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSL 383 (546)
T ss_pred eeEEEcCCcCCHHHHHHHHHHcC--CCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccC
Confidence 99999999999999999999885 478999999999986544321 1 11113456899999999999998 478999
Q ss_pred CCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHH
Q 004034 588 EGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESAL 667 (778)
Q Consensus 588 ~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L 667 (778)
|.|+.|||+|+| |.++.||+++++.+...+. .+|||+|||+|++++||+++++||.||+||++|++|+|.|||++|
T Consensus 384 p~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~~--~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (546)
T PLN02330 384 PKNTPGELCVRS--QCVMQGYYNNKEETDRTID--EDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAIL 459 (546)
T ss_pred CCCCceEEEEec--chhhhhhccCccchhhhcc--CCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHH
Confidence 999999999999 8999999999988776643 378999999999999999999999999999999999999999999
Q ss_pred hcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 668 VSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 668 ~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
.+||.|.+++|++++++..++.++++|++.++...+ .++|+++++++|+.|++|+.|+++++||+|++||++|++|+
T Consensus 460 ~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~ 536 (546)
T PLN02330 460 LTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKES---EEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLK 536 (546)
T ss_pred HhCCchheEEEEeccccccCceeEEEEEECCCCCCC---HHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHH
Confidence 999999999999999888889999999987654433 46799999999999999999999999999999999999999
Q ss_pred HHHhcc
Q 004034 748 KIASRQ 753 (778)
Q Consensus 748 ~~~~~~ 753 (778)
+++...
T Consensus 537 ~~~~~~ 542 (546)
T PLN02330 537 EKMLSI 542 (546)
T ss_pred HHHHhh
Confidence 998643
No 67
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=9.3e-66 Score=593.74 Aligned_cols=504 Identities=24% Similarity=0.313 Sum_probs=415.7
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
++++|+++++ ++|+++|+.+. .+++||+||++++.++|+.|++.|+++||+|+++++|++++++++|||+++|
T Consensus 2 ~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 2 LHHLLEDAAA-RLPDATALVHH------DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred HHHHHHHHHH-HCCCCeEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 5678888888 89999999986 5789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++..++++++++++++++... ..+......+ +.+..++.++.... ....
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~ 136 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSERL---------DLLHPALPGC----HDLRTLILVGEPAH-----ASEG 136 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchh---------hhhHhhhhcc----cccceEEEecCccc-----ccCC
Confidence 9999999999999999999999999999976532 1111111221 23444554443221 0000
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchh
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 441 (778)
......|.+....... .+......+++++|+|||||||.||||+++|++++.+ .......+++.++|++++..|++|+
T Consensus 137 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~l~~~p~~~~ 214 (515)
T TIGR03098 137 GGESPSWPKLLALGDA-DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAG-AQSVATYLENRPDDRLLAVLPLSFD 214 (515)
T ss_pred ccccccHHHhhccccc-cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHH-HHHHHHHhCCCcccEEEEECchhhH
Confidence 1122334444332221 1223345688999999999999999999999996544 4444456788899999999999999
Q ss_pred hhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCC
Q 004034 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (778)
Q Consensus 442 ~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (778)
.++ ..++.+|..|+++++.+. .+++.+++.++++++|++.++|+++..|.+... ...+++++|.++++|+++
T Consensus 215 ~~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~~~l~~~~~~g~~l 286 (515)
T TIGR03098 215 YGF-NQLTTAFYVGATVVLHDY----LLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW---PESAAPSLRYLTNSGGAM 286 (515)
T ss_pred hHH-HHHHHHHHcCCEEEEcCC----CCHHHHHHHHHHcCCceEecChHHHHHHHhccc---CCCCccceEEEEecCCcC
Confidence 885 567899999999998754 489999999999999999999999999987532 123678999999999999
Q ss_pred CHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCC
Q 004034 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 601 (778)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~ 601 (778)
++++++.+.+.++ ++.+++.||+||++....... .....+++++|+|+++++++|+|+++++++.|+.|||+++|
T Consensus 287 ~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g-- 361 (515)
T TIGR03098 287 PRATLSRLRSFLP--NARLFLMYGLTEAFRSTYLPP-EEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEEGELVHRG-- 361 (515)
T ss_pred CHHHHHHHHHHCC--CCeEeeeeccccccceEeccc-ccccCCCCCcceecCCCEEEEECCCCCCCCCCCceEEEEcC--
Confidence 9999999999885 378999999999986543322 11234678999999999999999999999999999999999
Q ss_pred CcccccccCChhhhhhhccCC---------CCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCc
Q 004034 602 PGAFRTLYGDHERYETTYFKP---------FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 672 (778)
Q Consensus 602 p~v~~gY~~~~~~~~~~~~~~---------~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~ 672 (778)
+.++.|||++++.+...+... .++||+|||+|++++||++++.||.||+||++|.+|+|.|||++|.+||.
T Consensus 362 ~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~ 441 (515)
T TIGR03098 362 ALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGL 441 (515)
T ss_pred chhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCC
Confidence 889999999987766554321 13489999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHH
Q 004034 673 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 748 (778)
Q Consensus 673 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~ 748 (778)
|.+++|++++++..++.++++++...+...+ .++|+++++++|+++++|..++++++||+|.+||++|++|++
T Consensus 442 v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 442 VAEAVAFGVPDPTLGQAIVLVVTPPGGEELD---RAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred eeEEEEEeccCcccCceEEEEEEeCCCCCCC---HHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 9999999999988899999999876544333 578999999999999999999999999999999999999974
No 68
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-66 Score=611.86 Aligned_cols=508 Identities=20% Similarity=0.223 Sum_probs=389.2
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCC---CCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 277 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~---~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~ 277 (778)
.+.++|+++++ ++|+++|+++.+.. .+..+.+||+||.++++++|++|++. +++||+|+|+++|++++++++|||
T Consensus 35 ~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~ 112 (612)
T PRK12476 35 TLISLIERNIA-NVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAA 112 (612)
T ss_pred cHHHHHHHHHH-hCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHH
Confidence 36678898888 89999999985321 12346899999999999999999987 999999999999999999999999
Q ss_pred HHhCCEEEeC-CCCCC--HHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccc
Q 004034 278 ARIGAVHSVV-FAGFS--SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 354 (778)
Q Consensus 278 l~~Gav~vpl-~p~~~--~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 354 (778)
+++|++++|+ ++.++ .+++.+++++++++++|+++... ..+.+....+. ......++.++....
T Consensus 113 ~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~~--~~~~~~~i~~~~~~~-- 179 (612)
T PRK12476 113 IKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAA---------EAVEGFLRNLP--RLRRPRVIAIDAIPD-- 179 (612)
T ss_pred HHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHH---------HHHHHHHhhcc--cccCceEEEeccccc--
Confidence 9999999999 67777 88999999999999999976532 12222111110 001123333322100
Q ss_pred cccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC-CCCCcEEE
Q 004034 355 RENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-YKPSDVYW 433 (778)
Q Consensus 355 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~-~~~~d~~l 433 (778)
............++++++|+|||||||+||||+++|++++.+.. .....++ +.++++++
T Consensus 180 -------------------~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~~~~~l 239 (612)
T PRK12476 180 -------------------SAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLV-QMILSIDLLDRNTHGV 239 (612)
T ss_pred -------------------cccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHH-HHHHHhccCCCCceEE
Confidence 00001111234678999999999999999999999999654433 3344566 78889999
Q ss_pred EeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHH--HhCccEEEecHHHHHHHHhcCC--cccccCCCC
Q 004034 434 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVD--KYKVTIFYTAPTLVRSLMRDGN--EYVTRYSRK 509 (778)
Q Consensus 434 ~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~--~~~vT~l~~~Ps~l~~L~~~~~--~~~~~~~l~ 509 (778)
+.+|++|..|+.. ++.+++.|+++++........++..+++.++ ++++|+++.+|+++..++.... ......+++
T Consensus 240 ~~~Pl~h~~g~~~-~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~ 318 (612)
T PRK12476 240 SWLPLYHDMGLSM-IGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLS 318 (612)
T ss_pred EeCCcccccchHH-HHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchh
Confidence 9999999998644 4445556777666643222237899999995 5899999999998887776421 111234688
Q ss_pred ceeEEEEecCCCCHHHHHHHHHHhCC---CCcceecccccccccceecccCCCCC-------------------------
Q 004034 510 SLRVLGSVGEPINPSAWRWFFNVVGD---SRCPISDTWWQTETGGFMITPLPGAW------------------------- 561 (778)
Q Consensus 510 sLr~v~~gGe~l~~~~~~~~~~~~g~---~~~~i~~~YG~TE~g~~~~~~~~~~~------------------------- 561 (778)
+|| +++||+++++++++++.+.++. ....+++.||+||++..++...+...
T Consensus 319 ~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 397 (612)
T PRK12476 319 NVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPN 397 (612)
T ss_pred Hhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCC
Confidence 999 9999999999999999998732 23459999999998765433211100
Q ss_pred CCCCCCcCcCcCCceEEEECCC-CceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC----------------CCC
Q 004034 562 PQKPGSATFPFFGVQPVIVDEK-GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----------------PFP 624 (778)
Q Consensus 562 ~~~~~~~G~p~~g~~~~Ivd~~-g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~----------------~~~ 624 (778)
....+++|+|++|++++|+|++ |++++.|+.|||+|+| |.++.|||++++.+.+.|.. ..+
T Consensus 398 ~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g--~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~ 475 (612)
T PRK12476 398 AVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHG--DNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDG 475 (612)
T ss_pred cceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcC--CcccccccCChHHHHHHHhhhhccccccccccccccCCC
Confidence 0123578999999999999987 9999999999999999 89999999999988887742 123
Q ss_pred CeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhc-CCccce--EEEEEEecCCCCeEEEEEEEEcCCCC
Q 004034 625 GYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVS-HPQCAE--AAVVGVEHEVKGQGIYAFVTLVEGVP 701 (778)
Q Consensus 625 G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~-~p~V~e--a~Vv~~~~~~~~~~lva~Vv~~~~~~ 701 (778)
+||+|||+|+++ ||+|+|+||+||+||++|+||+|.|||++|.+ ||.|.+ ++|++++++. ++.++++|+.+++..
T Consensus 476 ~w~~TGDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~ 553 (612)
T PRK12476 476 TWLRTGDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTS 553 (612)
T ss_pred CeeeccccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcc
Confidence 599999999984 99999999999999999999999999999985 899999 7778888776 788999999876532
Q ss_pred -CCHHHHHHHHHHHHhhcC-CCcc-ccEEEECC--CCCCCCCCcccHHHHHHHHhc
Q 004034 702 -YSEELRKSLVLAVRKQIG-AFAA-PDKIHWAP--GLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 702 -~~~~l~~~l~~~l~~~Lp-~~~~-P~~i~~v~--~lP~T~sGKi~R~~L~~~~~~ 752 (778)
.+ .++|.+++++++. .|++ |..+++++ +||+|++|||+|++|++++.+
T Consensus 554 ~~~---~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 554 RAD---PAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLD 606 (612)
T ss_pred ccc---HHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHc
Confidence 22 3456666666665 3676 67888886 699999999999999998753
No 69
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-65 Score=596.66 Aligned_cols=510 Identities=24% Similarity=0.288 Sum_probs=418.8
Q ss_pred CcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHH
Q 004034 197 GITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLA 276 (778)
Q Consensus 197 ~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA 276 (778)
.+.|.. +.|+++++ .+|+++|+++. ++.+||.||.++++++|.+|.+.|+++||+|+|+++|+++++++++|
T Consensus 15 ~~~n~~-~~~~~~a~-~~~~~~a~~~~------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a 86 (542)
T PRK07786 15 RRQNWV-NQLARHAL-MQPDAPALRFL------GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLA 86 (542)
T ss_pred cccCHH-HHHHHHHH-HCCCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 455654 55777787 89999999987 57899999999999999999999999999999999999999999999
Q ss_pred HHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccc
Q 004034 277 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE 356 (778)
Q Consensus 277 ~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 356 (778)
|+++|++++|+++.++.+++..++++++++++++++... ..+..... ..+.++.++...+...
T Consensus 87 ~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~----~~~~~~~~~~~~~~~~---- 149 (542)
T PRK07786 87 ANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA---------PVATAVRD----IVPLLSTVVVAGGSSD---- 149 (542)
T ss_pred HHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH---------HHHHHhhh----ccCccceEEEecCCCc----
Confidence 999999999999999999999999999999999986532 11111111 1133444554432110
Q ss_pred cccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCC-CCCcEEEEe
Q 004034 357 NTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDY-KPSDVYWCT 435 (778)
Q Consensus 357 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~-~~~d~~l~~ 435 (778)
.....+.+.+.......+......+++++|+|||||||.||||+++|++++... ......+++ ..++++++.
T Consensus 150 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 222 (542)
T PRK07786 150 ------DSVLGYEDLLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQA-MTCLRTNGADINSDVGFVG 222 (542)
T ss_pred ------ccccCHHHHhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHH-HHHHHhcCCCCCCceEEEe
Confidence 011223333322222223334567889999999999999999999999965444 334445666 568899999
Q ss_pred CCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEE
Q 004034 436 ADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLG 515 (778)
Q Consensus 436 ~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~ 515 (778)
.|+.|.+|+ ..++.++..|+++++.+.. .+++..+++.++++++|.++++|++++.|....... . ...++|.++
T Consensus 223 ~p~~~~~g~-~~~~~~l~~G~~~v~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~--~-~~~~lr~i~ 296 (542)
T PRK07786 223 VPLFHIAGI-GSMLPGLLLGAPTVIYPLG--AFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQAR--P-RDLALRVLS 296 (542)
T ss_pred cchHHHHHH-HHHHHHHHccCEEEEccCC--CcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccC--c-cCcceEEEE
Confidence 999998874 6788999999999997532 248999999999999999999999999998765421 1 223799999
Q ss_pred EecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEE
Q 004034 516 SVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYL 595 (778)
Q Consensus 516 ~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL 595 (778)
+||+++++++++++.+.++ +.++++.||+||++.+.+..........++++|+|++++.++|+|+++++++.|+.|||
T Consensus 297 ~gg~~~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel 374 (542)
T PRK07786 297 WGAAPASDTLLRQMAATFP--EAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEVGEI 374 (542)
T ss_pred ECCCCCCHHHHHHHHHHcC--CCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCceEE
Confidence 9999999999999999885 47899999999998764432222222456789999999999999999999999999999
Q ss_pred EEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccce
Q 004034 596 CIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAE 675 (778)
Q Consensus 596 ~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~e 675 (778)
+++| +.+++||+++++.+...|. +|||+|||++++++||+++++||.||+||++|++|++.|||++|.+||.|.+
T Consensus 375 ~v~g--~~~~~gy~~~~~~~~~~f~---~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~ 449 (542)
T PRK07786 375 VYRA--PTLMSGYWNNPEATAEAFA---GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVE 449 (542)
T ss_pred EEEC--hhhhhhhcCCHHHHHHHhh---CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccE
Confidence 9999 8999999999988877653 6899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 676 AAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 676 a~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
++|++++++..++.++++|+....... ...++++++++++++.|++|..++++++||+|++||++|++|++++.+.
T Consensus 450 ~~v~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 525 (542)
T PRK07786 450 VAVIGRADEKWGEVPVAVAAVRNDDAA--LTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGAC 525 (542)
T ss_pred EEEEeccCcccCceEEEEEEECCCCCC--CCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhh
Confidence 999999887778889999998754321 1257899999999999999999999999999999999999999998754
No 70
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.3e-65 Score=595.35 Aligned_cols=505 Identities=23% Similarity=0.330 Sum_probs=411.4
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|++++ + ||++|+++. ++++||+||+++++++|..|.+.|+++|++|+++++|++++++++|||+++
T Consensus 26 ~~~~~~~~~a--~-p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~ 96 (536)
T PRK10946 26 PLTDILTRHA--A-SDAIAVICG------ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKL 96 (536)
T ss_pred cHHHHHHHhh--C-CCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHc
Confidence 4778898876 3 999999976 678999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++++.+..+..++..++++++++++++++.... +.......+....+ +.+..++..+...
T Consensus 97 G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~----~~~~~~~~~l~~~~----~~~~~~~~~~~~~--------- 159 (536)
T PRK10946 97 GVAPVNALFSHQRSELNAYASQIEPALLIADRQHAL----FSDDDFLNTLVAEH----SSLRVVLLLNDDG--------- 159 (536)
T ss_pred CeEEecCCccccHHHHHHHHhhcCCCEEEEeccccc----cchHHHHHHHHhhC----CCceEEEEecCCC---------
Confidence 998887777778889999999999999998765321 00011111111111 3333333322211
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
...+.+.+.......+.....++++++|+|||||||.||||+++|++++.+ .......+++.++|++++..|++|
T Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~-~~~~~~~~~~~~~~~~l~~~p~~h 234 (536)
T PRK10946 160 ----EHSLDDAINHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYS-VRRSVEICGFTPQTRYLCALPAAH 234 (536)
T ss_pred ----CccHHHHhhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHH-HHHHHHhcCCCCCceEEEecCccc
Confidence 111222222222222233456799999999999999999999999996554 444556788999999999999999
Q ss_pred hhhhhH-HHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 441 ITGHSY-VTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 441 ~~g~~~-~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
.+++.. .++.+|..|+++++.+. +++..++++++++++|++.++|++++.|++..........+++||.+++||+
T Consensus 235 ~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~ 310 (536)
T PRK10946 235 NYPMSSPGALGVFLAGGTVVLAPD----PSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGA 310 (536)
T ss_pred cccchhhhHHHHhhcCcEEEECCC----CCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCC
Confidence 877543 57888999999998654 4788999999999999999999999999876322222346789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCc-CCceEEEECCCCceeCCCeeeEEEEe
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPF-FGVQPVIVDEKGVEIEGECSGYLCIK 598 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~-~g~~~~Ivd~~g~~~~~g~~GEL~v~ 598 (778)
++++++.+++.+.++ +++++.||+||++.... ..........+++|+|+ +++.++|+|+++++++.|+.|||+|+
T Consensus 311 ~l~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~-~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~Gel~v~ 386 (536)
T PRK10946 311 RLSETLARRIPAELG---CQLQQVFGMAEGLVNYT-RLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEVGRLMTR 386 (536)
T ss_pred CCCHHHHHHHHHhcC---CeEEEeecccccceeee-cCCCccccccccCCcccCCCceEEEECCCCCCCCCCCccEEEEe
Confidence 999999999988886 78999999999764332 21111123467899999 79999999999999999999999999
Q ss_pred cCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEE
Q 004034 599 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 678 (778)
Q Consensus 599 g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~V 678 (778)
| +.++.|||++++.+...|.. +|||+|||++++|+||+++++||.||+||++|++|+|.|||++|.+||+|.+++|
T Consensus 387 g--~~~~~GY~~~~~~t~~~~~~--d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v 462 (536)
T PRK10946 387 G--PYTFRGYYKSPQHNASAFDA--NGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAAL 462 (536)
T ss_pred c--CccchhhcCCcccchhhccc--CCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEE
Confidence 9 89999999999877766543 6899999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhh-cCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 679 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 679 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
++++++..++.++++|+++++. + .++|++++++. +++|++|..+++++++|+|++||++|++|++++...
T Consensus 463 ~~~~~~~~g~~~~a~vv~~~~~--~---~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~ 533 (536)
T PRK10946 463 VSMEDELMGEKSCAFLVVKEPL--K---AVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASR 533 (536)
T ss_pred EcCCCcccCceEEEEEEeCCCC--C---HHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhh
Confidence 9999888888999999987652 2 46888899886 999999999999999999999999999999987654
No 71
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-66 Score=589.78 Aligned_cols=480 Identities=22% Similarity=0.343 Sum_probs=398.3
Q ss_pred HhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeC
Q 004034 208 RNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 287 (778)
Q Consensus 208 ~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl 287 (778)
.+++ .+||++|+.... .++.+||+||.++++++|.+|++.|+++||+|+|+++|++++++++|||+++|++++|+
T Consensus 3 ~~a~-~~p~~~a~~~~~----~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~ 77 (488)
T PRK09088 3 FHAR-LQPQRLAAVDLA----LGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPL 77 (488)
T ss_pred hhhh-hCCCceEEEecC----CCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEee
Confidence 4555 799999998631 15789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccc
Q 004034 288 FAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIW 367 (778)
Q Consensus 288 ~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 367 (778)
++.++.+++.+++++++++++|+++....... ..+.++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------------------~~~~~~~~----------------- 117 (488)
T PRK09088 78 NWRLSASELDALLQDAEPRLLLGDDAVAAGRT-----------------------DVEDLAAF----------------- 117 (488)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEcchhhcccc-----------------------cccchhhh-----------------
Confidence 99999999999999999999999765321000 00000000
Q ss_pred hhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHH
Q 004034 368 WQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYV 447 (778)
Q Consensus 368 ~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~ 447 (778)
.+...... ........++++++++|||||||.||+|+++|++++ .....+...+.+.++|++++.+|+.|.+++...
T Consensus 118 -~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~-~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~ 194 (488)
T PRK09088 118 -IASADALE-PADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQ-QTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITS 194 (488)
T ss_pred -hhhccccc-cccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHH-HHHHHHHHhhCCCCCcEEEEecchHHHHHHHHH
Confidence 00000000 011123456889999999999999999999999954 444445556678889999999999999998778
Q ss_pred HHHHHhcCcEEEEEcCCCCCCChhHHHHHHHH--hCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHH
Q 004034 448 TYGPMLNGASVVVFEGAPTYPDSGRSWDIVDK--YKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSA 525 (778)
Q Consensus 448 i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~--~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~ 525 (778)
++.++..|+++++.++ .++..++..+.+ +++|+++++|++++.|.+... .....+++||.+++||++++.+.
T Consensus 195 ~~~~l~~g~~~~~~~~----~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~~gG~~~~~~~ 268 (488)
T PRK09088 195 VRPVLAVGGSILVSNG----FEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPG--FDAAALRHLTALFTGGAPHAAED 268 (488)
T ss_pred HHHHHhcCCEEEEcCC----CCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcC--cCccccccceEEEecCCCCCHHH
Confidence 8889999999998754 377888888864 889999999999999887643 12345789999999999999998
Q ss_pred HHHHHHHhCCCCcceecccccccccceecccCC-CCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcc
Q 004034 526 WRWFFNVVGDSRCPISDTWWQTETGGFMITPLP-GAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGA 604 (778)
Q Consensus 526 ~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~-~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v 604 (778)
++.+.+. + +++++.||+||++.+...... .....+++++|+|+++++++|+|+++++++.|+.|||+|+| |.+
T Consensus 269 ~~~~~~~-g---~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~--~~~ 342 (488)
T PRK09088 269 ILGWLDD-G---IPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVPGELLLRG--PNL 342 (488)
T ss_pred HHHHHHh-C---CceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCceEEEEEC--Ccc
Confidence 8877654 3 789999999999875432211 11123568899999999999999999999999999999999 899
Q ss_pred cccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecC
Q 004034 605 FRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHE 684 (778)
Q Consensus 605 ~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~ 684 (778)
+.||+++++.+...+.. +|||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.+||.|.+++|++++++
T Consensus 343 ~~gY~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~ 420 (488)
T PRK09088 343 SPGYWRRPQATARAFTG--DGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADA 420 (488)
T ss_pred chhhcCChhhhhhhhcC--CCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCc
Confidence 99999999888766543 6899999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 685 VKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 685 ~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
..++..+++|+++++...+ .+++++++++++++|++|..|+++++||+|++||++|++|++++.+
T Consensus 421 ~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~ 485 (488)
T PRK09088 421 QWGEVGYLAIVPADGAPLD---LERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAA 485 (488)
T ss_pred cCCceeEEEEEECCCCCCC---HHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHh
Confidence 7788889999987654433 5789999999999999999999999999999999999999998864
No 72
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.7e-65 Score=599.16 Aligned_cols=511 Identities=21% Similarity=0.301 Sum_probs=396.8
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+.++|+++++ .+||++|+++. ++++||+||+++++++|+.|.++|+++||+|+|+++|++++++++|||+++|
T Consensus 16 ~~~~l~~~~~-~~p~~~Al~~~------~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G 88 (579)
T PLN03102 16 PITFLKRASE-CYPNRTSIIYG------KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAG 88 (579)
T ss_pred HHHHHHHHHH-hCCCCeEEEEC------CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence 6778999998 89999999986 5789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhh--cCCCccEEEEEccCCcccccccc
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK--SGISVDVCLTYENQSAMTRENTK 359 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vi~~~~~~~~~~~~~~ 359 (778)
++++|++|.++.+++.++|+.+++++||++++.. ..+.+....+.. ....+ .++.++..... ...
T Consensus 89 ~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~ 155 (579)
T PLN03102 89 AVLNPINTRLDATSIAAILRHAKPKILFVDRSFE---------PLAREVLHLLSSEDSNLNL-PVIFIHEIDFP---KRP 155 (579)
T ss_pred cEEeeccccCCHHHHHHHHhccCCeEEEEChhhH---------HHHHHHHhhccccccccCc-eEEEecccccc---cCC
Confidence 9999999999999999999999999999976542 222222222210 00112 23333322100 000
Q ss_pred CCCCcccchhhccCCCCCCC-----CccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEE
Q 004034 360 WQDGRDIWWQDVVPKYPTKC-----EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWC 434 (778)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~ 434 (778)
......|.+......... ......++++++|+|||||||.||||+++|++++.... .....+.+...+++++
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~-~~~~~~~~~~~~~~l~ 232 (579)
T PLN03102 156 --SSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTL-SAIIGWEMGTCPVYLW 232 (579)
T ss_pred --cccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHH-HHHhhcCCCCCCeEEe
Confidence 001223333332211110 11234578999999999999999999999999544332 2233455667789999
Q ss_pred eCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEE
Q 004034 435 TADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVL 514 (778)
Q Consensus 435 ~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v 514 (778)
.+|++|..++ ...+.++..|+++++... +++..+++.|+++++|++.++|+++..|.+.... .....++++.+
T Consensus 233 ~~pl~h~~g~-~~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~~~~~ 305 (579)
T PLN03102 233 TLPMFHCNGW-TFTWGTAARGGTSVCMRH----VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSL--DLSPRSGPVHV 305 (579)
T ss_pred cCChhhhcch-hHHHHHHHhcCcEEeecc----CChHHHHHHHHHcCCeEEEeChHHHHHHHhCccc--ccCCcccceEE
Confidence 9999998874 455678889999988764 3678899999999999999999999999876431 22345678899
Q ss_pred EEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccC-CC-------C----CCCCCCCcCcCcCCceEEEECC
Q 004034 515 GSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PG-------A----WPQKPGSATFPFFGVQPVIVDE 582 (778)
Q Consensus 515 ~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~-~~-------~----~~~~~~~~G~p~~g~~~~Ivd~ 582 (778)
++||+++++.+.+++.+ +| +++++.||+||+++..+... .. . .....+..+.+++++ .+.|+
T Consensus 306 ~~gg~~~~~~~~~~~~~-~g---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v--~i~~~ 379 (579)
T PLN03102 306 LTGGSPPPAALVKKVQR-LG---FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADV--DVKNK 379 (579)
T ss_pred EECCCCCCHHHHHHHHH-cC---CeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccce--EEecc
Confidence 99999999999988865 45 68999999999986433211 00 0 001223344455544 45563
Q ss_pred -CCceeCC--CeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeC
Q 004034 583 -KGVEIEG--ECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIG 659 (778)
Q Consensus 583 -~g~~~~~--g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~ 659 (778)
.+++++. ++.|||+|+| |++++|||++++.+...|. +|||+|||+|++|+||+++|+||.||+||++|++|+
T Consensus 380 ~~~~~v~~~~~~~GEl~v~g--~~~~~GY~~~~~~t~~~f~---~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~ 454 (579)
T PLN03102 380 ETQESVPRDGKTMGEIVIKG--SSIMKGYLKNPKATSEAFK---HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENIS 454 (579)
T ss_pred ccccccCCCCCCceEEEEEC--cchhhhhcCChhhhHhhhc---cCceecCceEEEcCCCeEEEEeccCcEEEECCEEEC
Confidence 5667764 4689999999 8999999999988877653 689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCH-------HHHHHHHHHHHhhcCCCccccEEEECCC
Q 004034 660 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSE-------ELRKSLVLAVRKQIGAFAAPDKIHWAPG 732 (778)
Q Consensus 660 ~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~-------~l~~~l~~~l~~~Lp~~~~P~~i~~v~~ 732 (778)
|.|||++|.+||.|.+++|++++++..++.++|+|++.++....+ ....+++++++++||.|++|..|+++++
T Consensus 455 p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~ 534 (579)
T PLN03102 455 SVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQE 534 (579)
T ss_pred HHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEccc
Confidence 999999999999999999999999888899999999876543211 0146899999999999999999999999
Q ss_pred CCCCCCCcccHHHHHHHHhcc
Q 004034 733 LPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 733 lP~T~sGKi~R~~L~~~~~~~ 753 (778)
||+|++|||+|++|++++.+.
T Consensus 535 ~P~t~~gKi~r~~L~~~~~~~ 555 (579)
T PLN03102 535 LPKNGNGKILKPKLRDIAKGL 555 (579)
T ss_pred CCCCCcccccHHHHHHHHHHh
Confidence 999999999999999998764
No 73
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-65 Score=593.23 Aligned_cols=488 Identities=23% Similarity=0.296 Sum_probs=394.3
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGV-KKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv-~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
++.++|.++ ..|+++|+++. +.++||.||.++++++|..|.++|+ ++||+|+|+++|++++++++|||++
T Consensus 4 ~~~~~l~~~---~~p~~~Al~~~------~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~ 74 (540)
T PRK13388 4 TIAQLLRDR---AGDDTIAVRYG------DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAAL 74 (540)
T ss_pred hHHHHHHhh---ccCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHh
Confidence 466777664 47999999876 5789999999999999999999999 8999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccccc
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (778)
+|++++|++|.++.+++..++++++++++|++++.. ..+ ..+. .+.++ ++.++..
T Consensus 75 ~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~---------~~~----~~~~--~~~~~-~i~~~~~--------- 129 (540)
T PRK13388 75 GGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHR---------PLL----DGLD--LPGVR-VLDVDTP--------- 129 (540)
T ss_pred CCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhh---------HHH----Hhhc--ccCce-EEEccch---------
Confidence 999999999999999999999999999999976532 111 1110 01222 2322211
Q ss_pred CCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcc
Q 004034 360 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
.|.+.+.......+.....++++++|+|||||||+||||+++|++++ .........+++.++|+++..+|++
T Consensus 130 -------~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~-~~~~~~~~~~~~~~~d~~l~~~p~~ 201 (540)
T PRK13388 130 -------AYAELVAAAGALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLA-FAGRALTERFGLTRDDVCYVSMPLF 201 (540)
T ss_pred -------hhhhhhccccCcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHH-HHHHHHHHHhCCCCCCEEEEeeCch
Confidence 11122221111122233567999999999999999999999999954 4455556678999999999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|..++...++.+|..|+++++.+. +++..+++.++++++|++..+|+.+..++..... ......+++.+ + |+
T Consensus 202 ~~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~~~l~~~-~-G~ 273 (540)
T PRK13388 202 HSNAVMAGWAPAVASGAAVALPAK----FSASGFLDDVRRYGATYFNYVGKPLAYILATPER--PDDADNPLRVA-F-GN 273 (540)
T ss_pred hhcchHHHHHHHHHcCcEEEECCC----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCC--ccccccceEEE-E-CC
Confidence 998876666678999999988643 4789999999999999999999999998876432 11223466643 3 66
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEE-----------EECCCCcee-
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV-----------IVDEKGVEI- 587 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~-----------Ivd~~g~~~- 587 (778)
+++++..+++.+.++ +++++.||+||++.++... . ...++++|+|++|++++ ++|++|+++
T Consensus 274 ~~~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~-~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~ 346 (540)
T PRK13388 274 EASPRDIAEFSRRFG---CQVEDGYGSSEGAVIVVRE-P---GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLN 346 (540)
T ss_pred CCCHHHHHHHHHHhC---CceecccccccccceeecC-C---CCCCCCCCCCCCCcEEEcCCCCccccceeccCcccccc
Confidence 778888888888886 6899999999998765432 1 13467899999998753 455666665
Q ss_pred CCCeeeEEEEe-cCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHH
Q 004034 588 EGECSGYLCIK-SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESA 666 (778)
Q Consensus 588 ~~g~~GEL~v~-g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~ 666 (778)
+.+..|||+++ | ++++.||+++++.+.+.+. +|||+|||+|++|+||+++++||.||+||++|++|+|.|||++
T Consensus 347 ~~~~~GEl~v~~g--~~~~~gY~~~~~~t~~~~~---~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~ 421 (540)
T PRK13388 347 ADEAIGELVNTAG--AGFFEGYYNNPEATAERMR---HGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERI 421 (540)
T ss_pred CCCcceEEEEecC--CcccccccCChHHHHHHhh---cCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHH
Confidence 34678999998 8 8999999999998877652 6899999999999999999999999999999999999999999
Q ss_pred HhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--cCCCccccEEEECCCCCCCCCCcccHH
Q 004034 667 LVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ--IGAFAAPDKIHWAPGLPKTRSGKIMRR 744 (778)
Q Consensus 667 L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~--Lp~~~~P~~i~~v~~lP~T~sGKi~R~ 744 (778)
|.+||+|.+|+|++++++..|+.+++++++.++...+ .++++++++.+ |++|++|..++++++||+|++||++|+
T Consensus 422 l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~ 498 (540)
T PRK13388 422 LLRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFD---PDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKR 498 (540)
T ss_pred HHhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCC---HHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHH
Confidence 9999999999999999887888899999887665443 45778888764 999999999999999999999999999
Q ss_pred HHHHHHhcc
Q 004034 745 ILRKIASRQ 753 (778)
Q Consensus 745 ~L~~~~~~~ 753 (778)
+|+++....
T Consensus 499 ~L~~~~~~~ 507 (540)
T PRK13388 499 ELIAQGWAT 507 (540)
T ss_pred hHHHhccCC
Confidence 999987544
No 74
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-65 Score=597.83 Aligned_cols=510 Identities=22% Similarity=0.331 Sum_probs=407.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~-Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
.+.++|+++++ ++|+++|+++. .+++||.||.++++++|+.|.+. |+++||+|+|+++|++++++++|||++
T Consensus 25 ~~~~~l~~~~~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~ 97 (562)
T PRK12492 25 SVVEVFERSCK-KFADRPAFSNL------GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALR 97 (562)
T ss_pred cHHHHHHHHHH-hCCCCeeEecC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 47788999998 89999999865 57899999999999999999984 999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEc--c-CCcc---
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYE--N-QSAM--- 353 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~--~-~~~~--- 353 (778)
+|++++|++|.++.+++.+++++++++++++++.... .+...... .....++... + ....
T Consensus 98 ~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~---------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 163 (562)
T PRK12492 98 AGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGK---------LVQEVLPD-----TGIEYLIEAKMGDLLPAAKGW 163 (562)
T ss_pred cCeEEeccCccCCHHHHHHHHhccCceEEEeccccch---------HHHHhhhc-----cCceEEEeechhhccccccch
Confidence 9999999999999999999999999999999765421 11111110 0111111100 0 0000
Q ss_pred ---------ccccccCCCCcccchhhccCCCC-CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHh
Q 004034 354 ---------TRENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 423 (778)
Q Consensus 354 ---------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~ 423 (778)
..............|.+.+.... ..........+++++|+|||||||.||||+++|++++.+..... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~ 242 (562)
T PRK12492 164 LVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVR-AC 242 (562)
T ss_pred hcccccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHH-HH
Confidence 00000000011223333322211 11122345678999999999999999999999999654433222 22
Q ss_pred hC---------CCC-CcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHH
Q 004034 424 FD---------YKP-SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVR 493 (778)
Q Consensus 424 ~~---------~~~-~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~ 493 (778)
++ +.. .++++...|+.|..++.+.++..+..|+++++.... .++..+++.++++++|++..+|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~ 319 (562)
T PRK12492 243 LSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNP---RDIPGFIKELGKWRFSALLGLNTLFV 319 (562)
T ss_pred HhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCC---cCHHHHHHHHHHhCCceeeCcHHHHH
Confidence 22 223 357788999999998777777788899988776532 37889999999999999999999999
Q ss_pred HHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcC
Q 004034 494 SLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFF 573 (778)
Q Consensus 494 ~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~ 573 (778)
.|++... ....+++++|.+++||+++++++.++|.+.++ +++++.||+||++.+++...... ...++++|+|++
T Consensus 320 ~l~~~~~--~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~p~~ 393 (562)
T PRK12492 320 ALMDHPG--FKDLDFSALKLTNSGGTALVKATAERWEQLTG---CTIVEGYGLTETSPVASTNPYGE-LARLGTVGIPVP 393 (562)
T ss_pred HHHhCcC--cccccccceeEEEeccccCCHHHHHHHHHHhC---CceeeccCccccCceeeecCCcc-cccCCccceecC
Confidence 9987653 23456789999999999999999999998876 78999999999987655433221 235678999999
Q ss_pred CceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEe
Q 004034 574 GVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINV 653 (778)
Q Consensus 574 g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki 653 (778)
+++++|+|+++++++.|+.|||+|+| +.+++|||++++.+...+. .+|||+|||+|+++++|+++|.||.||+||+
T Consensus 394 ~~~v~ivd~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~--~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~ 469 (562)
T PRK12492 394 GTALKVIDDDGNELPLGERGELCIKG--PQVMKGYWQQPEATAEALD--AEGWFKTGDIAVIDPDGFVRIVDRKKDLIIV 469 (562)
T ss_pred CCEEEEECCCCCCCCCCCceEEEEeC--CccccccccCchhhhhccc--CCCceecCcEEEECCCCeEEEecccCCeEEE
Confidence 99999999999999999999999999 8999999999998877653 3689999999999999999999999999999
Q ss_pred CceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCC
Q 004034 654 SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGL 733 (778)
Q Consensus 654 ~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~l 733 (778)
+|++|+|.|||++|.+||.|.+++|++.++...++.++++++..+... + .++|+++++++|+.|++|..|+++++|
T Consensus 470 ~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~---~~~i~~~~~~~l~~~~~P~~i~~~~~~ 545 (562)
T PRK12492 470 SGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPGL-S---VEELKAYCKENFTGYKVPKHIVLRDSL 545 (562)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCC-C---HHHHHHHHHHhcccccCCcEEEEeccC
Confidence 999999999999999999999999999998878889999998765422 2 478999999999999999999999999
Q ss_pred CCCCCCcccHHHHHHH
Q 004034 734 PKTRSGKIMRRILRKI 749 (778)
Q Consensus 734 P~T~sGKi~R~~L~~~ 749 (778)
|+|.+||++|++|+++
T Consensus 546 P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 546 PMTPVGKILRRELRDI 561 (562)
T ss_pred CCCCCCceeHHHHHhh
Confidence 9999999999999975
No 75
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.2e-66 Score=609.02 Aligned_cols=523 Identities=16% Similarity=0.168 Sum_probs=396.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEeCC
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI---GVKKG-----------DAVIIYLPM 266 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~---Gv~~G-----------d~Vai~~~~ 266 (778)
++.++|.++++ ++||++|+++.. .+..++.+||+||.++++++|++|.++ |+++| |+|+|+++|
T Consensus 62 ~l~~~l~~~~~-~~p~~~Al~~~~-~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N 139 (746)
T PTZ00342 62 HIMKLLLEKYK-LNNNKIAIVEHS-CGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSN 139 (746)
T ss_pred hHHHHHHHHHh-hcCCceeEeccC-CCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCC
Confidence 67899999998 899999998642 111257999999999999999999974 99999 999999999
Q ss_pred ChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEE
Q 004034 267 LMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLT 346 (778)
Q Consensus 267 s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 346 (778)
++||++++|||+++|++.||+++.++.+++.++|+++++++||++... .+.+.+....+ +.++.+++
T Consensus 140 ~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~---------~~~l~~~~~~~----~~l~~ii~ 206 (746)
T PTZ00342 140 SINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDL---------VEGLLERKNEL----PHLKKLII 206 (746)
T ss_pred CHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHH---------HHHHHHhhccC----CCceEEEE
Confidence 999999999999999999999999999999999999999999985432 12222222222 56677777
Q ss_pred EccCCcccc----------------ccc------------------------cCC-----------------CCcccchh
Q 004034 347 YENQSAMTR----------------ENT------------------------KWQ-----------------DGRDIWWQ 369 (778)
Q Consensus 347 ~~~~~~~~~----------------~~~------------------------~~~-----------------~~~~~~~~ 369 (778)
++....... ... .+. ......|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 286 (746)
T PTZ00342 207 LDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFD 286 (746)
T ss_pred ECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHH
Confidence 764211000 000 000 00001112
Q ss_pred hccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHh-hCCCCCcEEEEeCCcchhhhhhHHH
Q 004034 370 DVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA-FDYKPSDVYWCTADCGWITGHSYVT 448 (778)
Q Consensus 370 ~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~g~~~~i 448 (778)
+.........+.....++|+|+|+|||||||.||||++||+|++.......... ....+.|++++++|++|+++.. ..
T Consensus 287 ~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~-~~ 365 (746)
T PTZ00342 287 DMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERV-IA 365 (746)
T ss_pred HHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHH-HH
Confidence 211111111223345689999999999999999999999999665543322211 1223568999999999999865 45
Q ss_pred HHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCC------ccccc-----------------
Q 004034 449 YGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN------EYVTR----------------- 505 (778)
Q Consensus 449 ~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~------~~~~~----------------- 505 (778)
+.+++.|++++++++ ++..+++.|+++++|+++++|.+++.|.+... ....+
T Consensus 366 ~~~l~~G~~i~~~~~-----~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 440 (746)
T PTZ00342 366 YLSFMLGGTINIWSK-----DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGG 440 (746)
T ss_pred HHHHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCC
Confidence 678999999999853 68899999999999999999999998875200 00000
Q ss_pred -----------------CCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCc
Q 004034 506 -----------------YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSA 568 (778)
Q Consensus 506 -----------------~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~ 568 (778)
...++||.+++||+++++++.++|...+| ++++++||+||+++..+...+. ...++++
T Consensus 441 ~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g---~~i~~gYGlTEt~~~~~~~~~~--~~~~gsv 515 (746)
T PTZ00342 441 FSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN---VNYYQGYGLTETTGPIFVQHAD--DNNTESI 515 (746)
T ss_pred cchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC---CCEEEeeccCcccceeeeccCC--CCCcccc
Confidence 01268999999999999999999998887 7899999999998765544332 2467899
Q ss_pred CcCc-CCceEEEEC-CCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEee
Q 004034 569 TFPF-FGVQPVIVD-EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGR 646 (778)
Q Consensus 569 G~p~-~g~~~~Ivd-~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR 646 (778)
|+|+ ++++++|+| +++...+.+..|||+|+| |+++.|||++++.+.+.|.. +|||+|||+|++|+||+|+|+||
T Consensus 516 G~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrG--p~v~~GY~~~pe~T~~~f~~--dGW~~TGDig~~d~dG~l~i~gR 591 (746)
T PTZ00342 516 GGPISPNTKYKVRTWETYKATDTLPKGELLIKS--DSIFSGYFLEKEQTKNAFTE--DGYFKTGDIVQINKNGSLTFLDR 591 (746)
T ss_pred cCcCCCcEEEEEecccccccCCCCCceEEEEec--CcccccccCChhhhhhhcCc--CCcccCCcEEEECCCCeEEEEcc
Confidence 9998 999999998 343444444579999999 89999999999999988754 78999999999999999999999
Q ss_pred cCCEEEe-CceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCC----------------CC---CCH--
Q 004034 647 VDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG----------------VP---YSE-- 704 (778)
Q Consensus 647 ~dd~Iki-~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~----------------~~---~~~-- 704 (778)
+||+||+ +|++|+|.|||++|.+||.|.+|+|++.. ....++|+|++... .. ..+
T Consensus 592 ~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~---~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~ 668 (746)
T PTZ00342 592 SKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDD---SMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKL 668 (746)
T ss_pred CCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccC---CccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHh
Confidence 9999997 59999999999999999999999999852 23469999988641 10 000
Q ss_pred --------HHHHHHHHHHH-----hhcCCCccccEEEECC-CC----CCCCCCcccHHHHHHHHhcccCc
Q 004034 705 --------ELRKSLVLAVR-----KQIGAFAAPDKIHWAP-GL----PKTRSGKIMRRILRKIASRQLDE 756 (778)
Q Consensus 705 --------~l~~~l~~~l~-----~~Lp~~~~P~~i~~v~-~l----P~T~sGKi~R~~L~~~~~~~~~~ 756 (778)
.+.+.+++.+. ..|+.|..+++|.+++ .+ -+|++.|+.|+.+.+.++..+++
T Consensus 669 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i~~ 738 (746)
T PTZ00342 669 TDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFIDQ 738 (746)
T ss_pred hhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHHHH
Confidence 11222332332 2599999999999886 33 28999999999999998865543
No 76
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-65 Score=596.66 Aligned_cols=515 Identities=24% Similarity=0.345 Sum_probs=410.9
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
+++++|+++++ .+|+++|+++. ++.+||+||++++.++|+.|++.|+++||+|+|+++|++++++++|||+++
T Consensus 25 ~~~~~~~~~a~-~~p~~~a~~~~------~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 97 (563)
T PRK06710 25 PLHKYVEQMAS-RYPEKKALHFL------GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLA 97 (563)
T ss_pred cHHHHHHHHHH-HCCCceEEEec------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 57899999988 89999999986 678999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccc---
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN--- 357 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~--- 357 (778)
|++++|++|.++.+++.++++.++++++++++....... ..... .....+++...........
T Consensus 98 G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 163 (563)
T PRK06710 98 GGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVT---------NVQSA-----TKIEHVIVTRIADFLPFPKNLL 163 (563)
T ss_pred CeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhh---------ccchh-----hccceeEEeccccccccccccc
Confidence 999999999999999999999999999999875422110 00000 0111121110000000000
Q ss_pred ------------ccCCCCc-ccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhh
Q 004034 358 ------------TKWQDGR-DIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAF 424 (778)
Q Consensus 358 ------------~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~ 424 (778)
....... ...|.................++++++|+|||||||.||||+++|++++.+........+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~ 243 (563)
T PRK06710 164 YPFVQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLY 243 (563)
T ss_pred cchhhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhcc
Confidence 0000000 001111111111111111123578999999999999999999999996544433333334
Q ss_pred CCCC-CcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccc
Q 004034 425 DYKP-SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV 503 (778)
Q Consensus 425 ~~~~-~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~ 503 (778)
+... ++++++..|++|..++...++.+++.|+++++.+. +++..+++.|+++++|++.++|++++.++.... .
T Consensus 244 ~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~ 317 (563)
T PRK06710 244 NCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPK----FDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPL--L 317 (563)
T ss_pred CCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCC----CCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCc--c
Confidence 5444 45889999999998876667788999999999753 488999999999999999999999999987643 2
Q ss_pred ccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEEC-C
Q 004034 504 TRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-E 582 (778)
Q Consensus 504 ~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd-~ 582 (778)
...++++||.+++||+++++++++++.+.++ +++++.||+||++.+...... .....++++|+|++++.++|+| +
T Consensus 318 ~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~~~~ 393 (563)
T PRK06710 318 KEYDISSIRACISGSAPLPVEVQEKFETVTG---GKLVEGYGLTESSPVTHSNFL-WEKRVPGSIGVPWPDTEAMIMSLE 393 (563)
T ss_pred ccCChhhhhheeeCCCcCCHHHHHHHHHhhC---CCEecccccccCccccccCcc-cccccCCccCCCCCCCeEEEEECC
Confidence 2346689999999999999999999988876 689999999999875442221 1123467899999999999998 5
Q ss_pred CCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHH
Q 004034 583 KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAE 662 (778)
Q Consensus 583 ~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~e 662 (778)
++++++.|+.|||+|+| |.+++||+++++.+...+ . +|||+|||++++++||+++++||.||+||++|++|+|.|
T Consensus 394 ~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~~~~~~-~--~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~e 468 (563)
T PRK06710 394 TGEALPPGEIGEIVVKG--PQIMKGYWNKPEETAAVL-Q--DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPRE 468 (563)
T ss_pred CCccCCCCCceEEEEec--CccchhhhCChHHHhhhc-c--cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHH
Confidence 78999999999999999 899999999998877654 2 689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCccc
Q 004034 663 VESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 742 (778)
Q Consensus 663 IE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~ 742 (778)
||++|.+||.|.+++|++++++..++.++++|+..++...+ .++++++++++|+.+++|..|+++++||+|++||++
T Consensus 469 iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~ 545 (563)
T PRK06710 469 VEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECS---EEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKIL 545 (563)
T ss_pred HHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCCC---HHHHHHHHHHhcccccCCcEEEEcccCCCCccchhh
Confidence 99999999999999999999888889999999988765443 568999999999999999999999999999999999
Q ss_pred HHHHHHHHhccc
Q 004034 743 RRILRKIASRQL 754 (778)
Q Consensus 743 R~~L~~~~~~~~ 754 (778)
|+.|+++...+.
T Consensus 546 r~~L~~~~~~~~ 557 (563)
T PRK06710 546 RRVLIEEEKRKN 557 (563)
T ss_pred HHHHHHHHhhcC
Confidence 999999987654
No 77
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-64 Score=592.27 Aligned_cols=522 Identities=23% Similarity=0.316 Sum_probs=416.2
Q ss_pred ccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHH
Q 004034 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (778)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~v 271 (778)
.||++...+ +.++|+++++ .+||++|+.+. ++.+||.||+++++++|..|.++|+++||+|+|+++|+++++
T Consensus 26 ~~~~~~~~~-l~~~l~~~a~-~~p~~~al~~~------~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~ 97 (567)
T PRK06178 26 PEYPHGERP-LTEYLRAWAR-ERPQRPAIIFY------GHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH 97 (567)
T ss_pred CCCCcCccc-HHHHHHHHHH-HCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH
Confidence 477777664 7788888888 89999999876 578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCC
Q 004034 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (778)
Q Consensus 272 va~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 351 (778)
+++|||+++|++++|++|.++.+++.+++++++++++++++... +.+.+.... ..+..++......
T Consensus 98 ~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~l~~~~~~-----~~~~~i~~~~~~~ 163 (567)
T PRK06178 98 IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA---------PVVEQVRAE-----TSLRHVIVTSLAD 163 (567)
T ss_pred HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHHHhhcc-----CCcceEEEecccc
Confidence 99999999999999999999999999999999999999987642 222222111 1233333222110
Q ss_pred ccccc-cccCCC------CcccchhhccC---CCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHH
Q 004034 352 AMTRE-NTKWQD------GRDIWWQDVVP---KYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK 421 (778)
Q Consensus 352 ~~~~~-~~~~~~------~~~~~~~~~l~---~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~ 421 (778)
..... ...... .....+.+..+ ..+.........++++++|+|||||||.||||+++|++++.+......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~ 243 (567)
T PRK06178 164 VLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYA 243 (567)
T ss_pred ccccccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHH
Confidence 00000 000000 00001111111 111111223456899999999999999999999999996655444434
Q ss_pred HhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc
Q 004034 422 YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 501 (778)
Q Consensus 422 ~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~ 501 (778)
....+.++|+++..+|++|+.|+...++.+|..|+++++.++ +++..+++.++++++|.+..+|..+..|++...
T Consensus 244 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~- 318 (567)
T PRK06178 244 VAVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLAR----WDAVAFMAAVERYRVTRTVMLVDNAVELMDHPR- 318 (567)
T ss_pred HhccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC-
Confidence 446778899999999999999877778889999999999864 489999999999999999999999999887643
Q ss_pred ccccCCCCceeEEEE--ecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCC--CC---CCCCCCCcCcCcCC
Q 004034 502 YVTRYSRKSLRVLGS--VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP--GA---WPQKPGSATFPFFG 574 (778)
Q Consensus 502 ~~~~~~l~sLr~v~~--gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~--~~---~~~~~~~~G~p~~g 574 (778)
....++++++.+.. .|+++++++++++.+.+|. ..+.+.||+||++........ .. ....++++|+|++|
T Consensus 319 -~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g 395 (567)
T PRK06178 319 -FAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGS--VLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPG 395 (567)
T ss_pred -CCCCCcchheeeeeccccccCCHHHHHHHHHHhCC--cccccccccccccccceeccccccCccccccCCcccccccCC
Confidence 23446678887654 4699999999999998872 334468999999865432211 00 12346779999999
Q ss_pred ceEEEEC-CCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEe
Q 004034 575 VQPVIVD-EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINV 653 (778)
Q Consensus 575 ~~~~Ivd-~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki 653 (778)
++++|+| +++++++.|+.|||+|+| |.++.||+++++.+...+. +|||+|||++++++||+++|+||+||+||+
T Consensus 396 ~~v~v~d~~~~~~~~~g~~Gel~v~g--~~v~~gY~~~~~~~~~~~~---dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~ 470 (567)
T PRK06178 396 TEFKICDFETGELLPLGAEGEIVVRT--PSLLKGYWNKPEATAEALR---DGWLHTGDIGKIDEQGFLHYLGRRKEMLKV 470 (567)
T ss_pred cEEEEEcCCCCCcCCCCCceEEEEEC--CcccccccCChhhhhhccc---CCceeecceEEEecCCeEEEEecccccEEE
Confidence 9999999 579999999999999999 8999999999987776653 689999999999999999999999999999
Q ss_pred CceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCC
Q 004034 654 SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGL 733 (778)
Q Consensus 654 ~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~l 733 (778)
+|++|+|.|||++|.++|+|.+++|++++++..++.++++|+++++...+ .++|+++++++++.|++|. +++++++
T Consensus 471 ~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~-i~~v~~i 546 (567)
T PRK06178 471 NGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADLT---AAALQAWCRENMAVYKVPE-IRIVDAL 546 (567)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCcCC---HHHHHHHHHhcCcccCCce-EEEeccC
Confidence 99999999999999999999999999998887788999999987655433 5789999999999999996 8889999
Q ss_pred CCCCCCcccHHHHHHHHhc
Q 004034 734 PKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 734 P~T~sGKi~R~~L~~~~~~ 752 (778)
|+|++||++|+.|++++.+
T Consensus 547 P~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 547 PMTATGKVRKQDLQALAEE 565 (567)
T ss_pred CCCCccceeHHHHHHHHHh
Confidence 9999999999999998864
No 78
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=4.2e-65 Score=586.46 Aligned_cols=494 Identities=19% Similarity=0.233 Sum_probs=407.7
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+.+.|.++++ .+|+++|+.+. ++++||+||.++++++|+.|++.|+++||+|+|+++|+.++++++|||+++|
T Consensus 2 ~~~~l~~~a~-~~p~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G 74 (502)
T TIGR01734 2 LIEAIQAFAE-TYPQTIAYRYQ------GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSG 74 (502)
T ss_pred HHHHHHHHHH-HCCCceEEEcC------CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhC
Confidence 3467888888 89999999876 6789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++.++++..+++.+++++...... .... ++.++...
T Consensus 75 ~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------------------~~~~-~~~~~~~~---------- 123 (502)
T TIGR01734 75 HAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDA--------------------VGTQ-IITLSALE---------- 123 (502)
T ss_pred CEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccc--------------------cCCc-eEEchHhh----------
Confidence 9999999999999999999999999999987542110 0011 11111100
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchh
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 441 (778)
................++++++|+|||||||.||+|+++|+++... ..+....+++..++++++..|++|.
T Consensus 124 --------~~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~~~ 194 (502)
T TIGR01734 124 --------QAETSGGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSF-TNWMLADFPLSEGKQFLNQAPFSFD 194 (502)
T ss_pred --------hhhhhcCCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHH-HHHHHHhCCCCCCceEEeecCceec
Confidence 0000000001112345789999999999999999999999996544 4444556788889999999999998
Q ss_pred hhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCC
Q 004034 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (778)
Q Consensus 442 ~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (778)
.+ ++.++.+|..|+++++++.. ...++..+++.+.++++|.+..+|++++.++.... .....+++++.++++|+++
T Consensus 195 ~~-~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~--~~~~~~~~l~~~~~~G~~~ 270 (502)
T TIGR01734 195 LS-VMDLYPCLASGGTLHCLDKD-ITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPN--FNQENYPHLTHFLFCGEEL 270 (502)
T ss_pred hh-HHHHHHHHHCCCEEEEcCHH-HhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccc--cccccCCcccEEEEcCCcC
Confidence 87 56788999999999998653 22478999999999999999999999988776532 2334678999999999999
Q ss_pred CHHHHHHHHHHhCCCCcceecccccccccceeccc-CCCC--CCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEe
Q 004034 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITP-LPGA--WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 598 (778)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~-~~~~--~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~ 598 (778)
++++++++.+.++ ++.+++.||+||++...... .... ......++|+|+++++++|+|+++++++.|+.|||+|+
T Consensus 271 ~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~Gel~v~ 348 (502)
T TIGR01734 271 PVKTAKALLERFP--KATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEKGEIVIV 348 (502)
T ss_pred CHHHHHHHHHHCC--CcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCeeEEEEc
Confidence 9999999999886 47899999999997644322 1111 12334679999999999999999999999999999999
Q ss_pred cCCCcccccccCChhhhhhhccCC-CCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEE
Q 004034 599 SSWPGAFRTLYGDHERYETTYFKP-FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAA 677 (778)
Q Consensus 599 g~~p~v~~gY~~~~~~~~~~~~~~-~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~ 677 (778)
| |.++.||+++++.+...++.. ..+||+|||+|++|++ +++++||.+|+||++|++|+|.|||++|.+||.|.+|+
T Consensus 349 g--~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~ 425 (502)
T TIGR01734 349 G--PSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAV 425 (502)
T ss_pred c--ccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEE
Confidence 9 899999999999888776542 2359999999999977 99999999999999999999999999999999999999
Q ss_pred EEEEe-cCCCCeEEEEEEEEcCCCCCC-HHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 678 VVGVE-HEVKGQGIYAFVTLVEGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 678 Vv~~~-~~~~~~~lva~Vv~~~~~~~~-~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
|+++. +....+.++++|+........ ..+.++|++.++++|++|++|+.++++++||+|++||++|++|++++.
T Consensus 426 vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 426 VVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred EEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 99976 445678899999987543222 344588999999999999999999999999999999999999999875
No 79
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-64 Score=586.48 Aligned_cols=500 Identities=23% Similarity=0.294 Sum_probs=414.5
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|.++++ ++|+++|+++. .+.+||.||.++++++|..|.+.|+++|++|+++++|++++++++|||+++
T Consensus 13 ~~~~~~~~~~~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~ 85 (524)
T PRK06188 13 TYGHLLVSALK-RYPDRPALVLG------DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLA 85 (524)
T ss_pred cHHHHHHHHHH-HCCCCeEEEEC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 47788999998 89999999986 578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++..++++++++++++++... ...+.+..... ..+..++.+.....
T Consensus 86 G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 145 (524)
T PRK06188 86 GLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPF--------VERALALLARV----PSLKHVLTLGPVPD-------- 145 (524)
T ss_pred CCEEEecccCCCHHHHHHHHHhcCceEEEEecchh--------hHHHHHHhhhc----CCceEEEEeCCccc--------
Confidence 99999999999999999999999999999976521 11111211111 23334443332110
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
..+..+.....+.........++++++|+|||||||.||+|+++|.+++ .........+++..+|++++..|++|
T Consensus 146 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~-~~~~~~~~~~~~~~~~~~l~~~pl~~ 220 (524)
T PRK06188 146 ----GVDLLAAAAKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIA-TMAQIQLAEWEWPADPRFLMCTPLSH 220 (524)
T ss_pred ----hhhHHHhhhccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHH-HHHHHHHhhcCCCcCcEEEEecCchh
Confidence 0000000010111111112245679999999999999999999999954 44455566788899999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
..+. .++.+++.|+++++.+. .++..+++.++++++|+++.+|++++.|++.... ...+++++|.+++||++
T Consensus 221 ~~g~--~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~~~l~~lr~~~~gg~~ 292 (524)
T PRK06188 221 AGGA--FFLPTLLRGGTVIVLAK----FDPAEVLRAIEEQRITATFLVPTMIYALLDHPDL--RTRDLSSLETVYYGASP 292 (524)
T ss_pred hhhH--HHHHHHHcCCEEEEcCC----CCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCc--cCCCCcceeEEEEcCCC
Confidence 8774 46788999999999864 4799999999999999999999999999887542 23478899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC----CCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEE
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA----WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLC 596 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~----~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~ 596 (778)
++++.++.+.+.++ ..+++.||+||++..+....... ......++|+|++++.++|+|+++++++.|+.|||+
T Consensus 293 ~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~Gel~ 369 (524)
T PRK06188 293 MSPVRLAEAIERFG---PIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEVGEIC 369 (524)
T ss_pred CCHHHHHHHHHHhC---chhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCeeEEE
Confidence 99999998888887 56999999999975544322111 134567899999999999999999999999999999
Q ss_pred EecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceE
Q 004034 597 IKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEA 676 (778)
Q Consensus 597 v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea 676 (778)
|+| |.++.||+++++.+...+ .+|||+|||++++++||++++.||.||+||++|++|+|.+||++|.+||+|.++
T Consensus 370 v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~ 444 (524)
T PRK06188 370 VRG--PLVMDGYWNRPEETAEAF---RDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQV 444 (524)
T ss_pred EEC--cchhhhhcCChHHhhhhh---cCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEE
Confidence 999 899999999998776665 268999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 677 AVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 677 ~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
+|++++++..++.+++++++++....+ .++|+++++++++.|++|..|+++++||+|++||++|++|++.+.
T Consensus 445 ~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~ 516 (524)
T PRK06188 445 AVIGVPDEKWGEAVTAVVVLRPGAAVD---AAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYW 516 (524)
T ss_pred EEEeccCCCcCceEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHH
Confidence 999999887889999999987654433 578999999999999999999999999999999999999999974
No 80
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-64 Score=588.59 Aligned_cols=512 Identities=22% Similarity=0.297 Sum_probs=411.7
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++||+++++...+ +..+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 11 ~~~~~~~~~a~-~~~~~~~~~~~~~--~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~ 87 (542)
T PRK06018 11 LCHRIIDHAAR-IHGNREVVTRSVE--GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGI 87 (542)
T ss_pred CHHHHHHHHHH-hCCCceEEEeecc--CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhc
Confidence 47899999998 8999999985321 23578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|++|.++.+++.++++.+++++++++.... ..+.+..... +.+..++.+.+..... ...+
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~ 152 (542)
T PRK06018 88 GAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFV---------PILEKIADKL----PSVERYVVLTDAAHMP--QTTL 152 (542)
T ss_pred CeEeeccccccCHHHHHHHHhccCCCEEEEccccH---------HHHHHHHhhC----CCccEEEEeccccccc--ccCc
Confidence 99999999999999999999999999999986542 2233322222 3444454443221100 0000
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHH-HHHHHHHHhhCCCCCcEEEEeCCcc
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMV-HTATTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
.....|.+.+.............++++++|+|||||||.||||+++|++.+. .........+++..+|+++...|++
T Consensus 153 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 230 (542)
T PRK06018 153 --KNAVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLF 230 (542)
T ss_pred --cccccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHH
Confidence 0122344433332222222345678899999999999999999999997432 2333344567888999999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|..++. ..+.++..|+++++... .+++..+++.++++++|++.++|++++.|.+.... ...++++||.++++||
T Consensus 231 h~~~~~-~~~~~~~~g~~~v~~~~---~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~G~ 304 (542)
T PRK06018 231 HANSWG-IAFSAPSMGTKLVMPGA---KLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEK--EGLKLPHLKMVVCGGS 304 (542)
T ss_pred HHhhhH-HHHhhhhcCceEEccCc---CCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccc--cCCCcccceEEEEcCC
Confidence 987743 44678899999988542 24789999999999999999999999999876532 2346789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccC-CCC-C-------CCCCCCcCcCcCCceEEEECCCCceeCCC
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PGA-W-------PQKPGSATFPFFGVQPVIVDEKGVEIEGE 590 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~-~~~-~-------~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g 590 (778)
+++++++++|.+ ++ +++++.||+||++.+.+... +.. . .....++|+|+++++++|+|+++++++.+
T Consensus 305 ~l~~~~~~~~~~-~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~ 380 (542)
T PRK06018 305 AMPRSMIKAFED-MG---VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWD 380 (542)
T ss_pred CCCHHHHHHHHH-hC---CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCC
Confidence 999999999998 65 78999999999987544321 110 0 01235789999999999999999988753
Q ss_pred --eeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHh
Q 004034 591 --CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALV 668 (778)
Q Consensus 591 --~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~ 668 (778)
..|||+++| +.++.|||++.. . . .+.+|||+|||++++++||+++++||.||+||++|++|++.|||++|.
T Consensus 381 ~~~~Gel~i~g--~~~~~gy~~~~~---~-~-~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~ 453 (542)
T PRK06018 381 GKTFGRLKVRG--PAVAAAYYRVDG---E-I-LDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAV 453 (542)
T ss_pred CCceeEEEEec--CCcchhhhcCcc---c-E-ecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHH
Confidence 689999999 899999999432 1 1 124789999999999999999999999999999999999999999999
Q ss_pred cCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHH
Q 004034 669 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 748 (778)
Q Consensus 669 ~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~ 748 (778)
+||+|.+|+|++++++..++.+.++|++.++...+ .++++++++++++.|++|..|+++++||+|++||++|++|++
T Consensus 454 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~ 530 (542)
T PRK06018 454 GHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETAT---REEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALRE 530 (542)
T ss_pred hCCcceeEEEEeccCCCcCceeEEEEEeCCCCCCC---HHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHH
Confidence 99999999999999988788999999988765443 468999999999999999999999999999999999999999
Q ss_pred HHhc
Q 004034 749 IASR 752 (778)
Q Consensus 749 ~~~~ 752 (778)
.+.+
T Consensus 531 ~~~~ 534 (542)
T PRK06018 531 QFKD 534 (542)
T ss_pred HHhc
Confidence 8864
No 81
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-65 Score=598.74 Aligned_cols=517 Identities=23% Similarity=0.294 Sum_probs=398.5
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|.++++ ++||++|+++. .+++||+||.++++++|..|++.|+++||+|+|+++|++++++++|||+++
T Consensus 38 tl~~~l~~~a~-~~p~~~Ai~~~------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~ 110 (600)
T PRK08279 38 SLGDVFEEAAA-RHPDRPALLFE------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKL 110 (600)
T ss_pred cHHHHHHHHHH-hCCCCcEEEeC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 57889999998 89999999986 678999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++.+++++++++++|+++... ..+.+..... .....++..+.... ..
T Consensus 111 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~------~~ 171 (600)
T PRK08279 111 GAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELV---------EAFEEARADL----ARPPRLWVAGGDTL------DD 171 (600)
T ss_pred CcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHH---------HHHHHHhhhh----cccceEEEecCccc------cc
Confidence 99999999999999999999999999999986532 2222222221 11122222221100 00
Q ss_pred CCCcccchhhccCCCCC--CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCc
Q 004034 361 QDGRDIWWQDVVPKYPT--KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 438 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~--~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 438 (778)
......+.+.....+. ........++++++|+|||||||.||||+++|++++.+ .......+++.++|++++.+|+
T Consensus 172 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~l~~~d~~l~~~pl 249 (600)
T PRK08279 172 -PEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKA-MGGFGGLLRLTPDDVLYCCLPL 249 (600)
T ss_pred -cccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHH-HHHHHHhcCCCCCcEEEEecCc
Confidence 0000011111111111 11123346789999999999999999999999996554 4445556899999999999999
Q ss_pred chhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEec
Q 004034 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (778)
Q Consensus 439 ~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gG 518 (778)
+|.+++...++.+|..|+++++.+. +++..+++.++++++|++.++|++++.++...... .....++|.+ +|
T Consensus 250 ~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~--~~~~~~l~~~--~g 321 (600)
T PRK08279 250 YHNTGGTVAWSSVLAAGATLALRRK----FSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKP--TDRDHRLRLM--IG 321 (600)
T ss_pred hhhhhHHHHHHHHHhcCcEEEEcCC----CCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCc--cccCcceeEE--ec
Confidence 9999987777788889999888653 58899999999999999999999999988764321 2234567754 48
Q ss_pred CCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcC----CceE---------EEECCCC-
Q 004034 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFF----GVQP---------VIVDEKG- 584 (778)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~----g~~~---------~Ivd~~g- 584 (778)
+.+++++++++.+.++. ..+++.||+||++..... . ...++++|++.+ +..+ .|.+.++
T Consensus 322 ~~l~~~~~~~~~~~~~~--~~l~~~YG~tE~~~~~~~-~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 394 (600)
T PRK08279 322 NGLRPDIWDEFQQRFGI--PRILEFYAASEGNVGFIN-V----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGR 394 (600)
T ss_pred CCCCHHHHHHHHHHhCc--ceeeeeecccccceeecc-c----CCCCcccccccccccccceeeeeccCcCceeeCCCCc
Confidence 88999999999999873 469999999999864332 1 123456676555 3332 2333333
Q ss_pred -ceeCCCeeeEEE--EecCCCcccccccCChhhhhhhcc----CCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCcee
Q 004034 585 -VEIEGECSGYLC--IKSSWPGAFRTLYGDHERYETTYF----KPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHR 657 (778)
Q Consensus 585 -~~~~~g~~GEL~--v~g~~p~v~~gY~~~~~~~~~~~~----~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~r 657 (778)
.+++.|+.|||+ |++ ++++.|| ++++.+...++ ...++||+|||+|++|+||+++|+||.||+||++|+|
T Consensus 395 ~~~~~~g~~Gel~~~i~~--~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~ 471 (600)
T PRK08279 395 CIKVKPGEVGLLIGRITD--RGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGEN 471 (600)
T ss_pred cccCCCCCceeEEEEecC--ccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcc
Confidence 357889999998 677 8999999 88877666553 2346799999999999999999999999999999999
Q ss_pred eCHHHHHHHHhcCCccceEEEEEEecCC-CCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCC
Q 004034 658 IGTAEVESALVSHPQCAEAAVVGVEHEV-KGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKT 736 (778)
Q Consensus 658 I~~~eIE~~L~~~p~V~ea~Vv~~~~~~-~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T 736 (778)
|+|.|||++|.+||+|.+|+|++++++. .+...+++++..++...+ .++|+++|+++||.|++|..|+++++||+|
T Consensus 472 i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~~---~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t 548 (600)
T PRK08279 472 VATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEFD---LAALAAHLYERLPAYAVPLFVRLVPELETT 548 (600)
T ss_pred cCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCccCC---HHHHHHHHHhhCccccCCeEEEeecCCCCC
Confidence 9999999999999999999999998764 345566666665433333 578999999999999999999999999999
Q ss_pred CCCcccHHHHHHHHhcccCcCCCCCCCCChh
Q 004034 737 RSGKIMRRILRKIASRQLDELGDTSTLADPG 767 (778)
Q Consensus 737 ~sGKi~R~~L~~~~~~~~~~~~~~~~~~~~~ 767 (778)
++||++|++|+++..... +..+.....||.
T Consensus 549 ~~GKi~r~~L~~~~~~~~-~~~~~~~~~~~~ 578 (600)
T PRK08279 549 GTFKYRKVDLRKEGFDPS-KVDDPLYVLDPG 578 (600)
T ss_pred cchhhhHHHHhhcCCCcc-ccCCeeEEEecC
Confidence 999999999999876552 223434444443
No 82
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-64 Score=588.55 Aligned_cols=512 Identities=22% Similarity=0.337 Sum_probs=410.3
Q ss_pred cHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
+++.++|.++++ ++|+++|+++. ++.+||.||+++++++|+.|.+.|+++||+|+|+++|++++++++|||++
T Consensus 23 ~~i~~~l~~~a~-~~p~~~a~~~~------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~ 95 (557)
T PRK07059 23 PSLADLLEESFR-QYADRPAFICM------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLR 95 (557)
T ss_pred CCHHHHHHHHHH-HcCCCceEEEc------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 368899999998 89999999986 57899999999999999999999999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccc-----
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT----- 354 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----- 354 (778)
+|++++|++|.++.+++.+++++++++++|+++... ..+.+.... .....+++........
T Consensus 96 ~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 161 (557)
T PRK07059 96 AGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFA---------TTVQQVLAK-----TAVKHVVVASMGDLLGFKGHI 161 (557)
T ss_pred cCeEEeccCcccCHHHHHHHHHccCceEEEEchhhH---------HHHHHhhcc-----cCCceeEEecccccccccccc
Confidence 999999999999999999999999999999876532 112111111 1222222221100000
Q ss_pred ---------cccccCCCCcccchhhccCCC-CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHH---
Q 004034 355 ---------RENTKWQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK--- 421 (778)
Q Consensus 355 ---------~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~--- 421 (778)
.....+.......+.+.+... ..........++++++|+|||||||.||||+++|++++.+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~ 241 (557)
T PRK07059 162 VNFVVRRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQ 241 (557)
T ss_pred cccccccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhc
Confidence 000011111223333333221 1122234456899999999999999999999999996544332111
Q ss_pred HhhCCC---CCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhc
Q 004034 422 YAFDYK---PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 498 (778)
Q Consensus 422 ~~~~~~---~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~ 498 (778)
..+... ....+++..|++|.+++....+.++..|++.++.+.. .++..+++.++++++|.+..+|+++..|...
T Consensus 242 ~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~ 318 (557)
T PRK07059 242 PAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNP---RDIPGFIKELKKYQVHIFPAVNTLYNALLNN 318 (557)
T ss_pred ccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCC---cCHHHHHHHHHHhCCeeeecCHHHHHHHHcC
Confidence 111111 2357788899999887666777888899988887542 3788999999999999999999999999876
Q ss_pred CCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEE
Q 004034 499 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 578 (778)
Q Consensus 499 ~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~ 578 (778)
.. ....+++++|.++.||+++++.++++|.+.++ +++++.||+||++.+++..... ....+.++|+|+++++++
T Consensus 319 ~~--~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~ 392 (557)
T PRK07059 319 PD--FDKLDFSKLIVANGGGMAVQRPVAERWLEMTG---CPITEGYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVS 392 (557)
T ss_pred cC--cCcCCchhheEEEeccccCCHHHHHHHHHHhC---CCeeeccccccccchhhcCCCC-CCCcCCcccCccCCcEEE
Confidence 53 23456789999999999999999999998886 7899999999998765433221 123467899999999999
Q ss_pred EECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceee
Q 004034 579 IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRI 658 (778)
Q Consensus 579 Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI 658 (778)
|+|+++++++.|+.|||+|+| +.++.||+++++.+...+.. +|||+|||++++++||+++++||+||+||++|++|
T Consensus 393 i~d~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i 468 (557)
T PRK07059 393 IRDDDGNDLPLGEPGEICIRG--PQVMAGYWNRPDETAKVMTA--DGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNV 468 (557)
T ss_pred EECCCCCCCCCCCceEEEEeC--CccchhhhcCHHHHhhhccc--CCceecCcEEEEcCCCcEEEecccccceEECCEEE
Confidence 999999999999999999999 89999999999888766543 78999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCC
Q 004034 659 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRS 738 (778)
Q Consensus 659 ~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~s 738 (778)
+|.|||++|.+||+|.+++|+++++...++.++++|+..+.. .+ .++++++++++|+.+++|..+++++++|+|++
T Consensus 469 ~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~-~~---~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~ 544 (557)
T PRK07059 469 YPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPA-LT---EEDVKAFCKERLTNYKRPKFVEFRTELPKTNV 544 (557)
T ss_pred cHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCC-CC---HHHHHHHHHHhcccccCCcEEEEeccCCCCcc
Confidence 999999999999999999999999888889999999876432 22 46899999999999999999999999999999
Q ss_pred CcccHHHHHHH
Q 004034 739 GKIMRRILRKI 749 (778)
Q Consensus 739 GKi~R~~L~~~ 749 (778)
||++|+.|+++
T Consensus 545 GK~~r~~L~~~ 555 (557)
T PRK07059 545 GKILRRELRDG 555 (557)
T ss_pred cceeHHHHHhh
Confidence 99999999864
No 83
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.8e-64 Score=586.80 Aligned_cols=509 Identities=23% Similarity=0.332 Sum_probs=407.8
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ .+|+++|+++. ++.+||.||.++++++|++|.++|+++||+|+|+++|++++++++|||+++
T Consensus 22 ~~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 94 (541)
T TIGR03205 22 TLPDLLSKAAA-DYGPRPALEFR------DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKA 94 (541)
T ss_pred CHHHHHHHHHH-HcCCCceEEEC------CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 57889999888 89999999876 578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcc--ccccc
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAM--TRENT 358 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~--~~~~~ 358 (778)
|++++|++|.++.+++.+++++++++++|+++... ....+.+.... ..+..+++++..... .....
T Consensus 95 G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 162 (541)
T TIGR03205 95 GARVVHLSPLDGERALSHKLSDSGARLLITSDLAA-------LLPMALKFLEK-----GLLDRLIVCEDDNWGKVGTPQA 162 (541)
T ss_pred CeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchh-------hhHHHHHhhhc-----ccceEEEEeccccccccccccc
Confidence 99999999999999999999999999999875321 11111111111 112333333321100 00000
Q ss_pred cC-CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHH-----hhCCCCCcEE
Q 004034 359 KW-QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY-----AFDYKPSDVY 432 (778)
Q Consensus 359 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~-----~~~~~~~d~~ 432 (778)
.. .......|.+.+.............++++++|+|||||||.||||+++|+++..... .... .+.....+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 241 (541)
T TIGR03205 163 PIPADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVS-IYDVWGKPSRATRGDVERV 241 (541)
T ss_pred ccCCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHH-HHHhhcccccccCCCCceE
Confidence 00 011123344443322222222345678999999999999999999999999653322 1111 1122335789
Q ss_pred EEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCcee
Q 004034 433 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 512 (778)
Q Consensus 433 l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr 512 (778)
++..|++|..++...++.++..|+++++... .++..+++.|+++++|++..+|++++.|.+... ....+++++|
T Consensus 242 l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~ 315 (541)
T TIGR03205 242 ICVLPLFHIYALTVILLRSLRRGDLISLHQR----FDVAAVFRDIEEKRATVFPGVPTMWIALANDPS--LEKRDLSSLA 315 (541)
T ss_pred EEeccHHHHHHHHHHHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCeEeechHHHHHHHHhCcc--ccccCccccc
Confidence 9999999998877778899999999888743 489999999999999999999999999987532 2234678999
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEE--CCCCceeCCC
Q 004034 513 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV--DEKGVEIEGE 590 (778)
Q Consensus 513 ~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Iv--d~~g~~~~~g 590 (778)
.+++||+++++++.+++.+.++ +++++.||+||++.+.+..... ....++++|+|++++.++|+ |+++++++.|
T Consensus 316 ~i~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g 391 (541)
T TIGR03205 316 TIGSGGAPLPVEVANFFERKTG---LKLKSGWGMTETCSPGTGHPPE-GPDKPGSIGLMLPGIELDVVSLDDPTKVLPPG 391 (541)
T ss_pred eEEEccccCCHHHHHHHHHHhC---CCeecccccccCCcccccCCCC-CCCCCCCcceeccCceeEEEecCCCCccCCCC
Confidence 9999999999999999988876 6899999999998765533221 12356789999999998875 6778999999
Q ss_pred eeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcC
Q 004034 591 CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSH 670 (778)
Q Consensus 591 ~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~ 670 (778)
+.|||+|+| |+++.||+++++.+.+.|. ++||+|||++++++||+++++||.||+||++|++|+|.|||++|.+|
T Consensus 392 ~~Gel~v~~--~~~~~gy~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~ 466 (541)
T TIGR03205 392 EVGELRIRG--PNVTRGYWNRPEESAEAFV---GDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEH 466 (541)
T ss_pred CeeEEEEec--CCccccccCChhhhHhhhc---cCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhC
Confidence 999999999 8999999999988877654 57999999999999999999999999999999999999999999999
Q ss_pred CccceEEEEEEecCCCCeEEEEEEEEcCCCC-CCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 671 PQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP-YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 671 p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~-~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
|+|.+++|++++++..++.+++++++.++.. .+ .++|+++++++|++|++|..|+++++||+|++||++|+.|+
T Consensus 467 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 467 PGVQEVIVIGIPDQYRGEAAKAFVKLRPGAKPFS---LDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred CCeeeEEEEecCCcccCceEEEEEEECCCCCcCC---HHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 9999999999998877889999999876532 22 57899999999999999999999999999999999999874
No 84
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.1e-65 Score=608.53 Aligned_cols=533 Identities=20% Similarity=0.227 Sum_probs=398.0
Q ss_pred cHHHHHHHHhhhccCCCeEEEEEEc---------CC--------CCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 004034 200 NICYNCLDRNIEAGLGDKVAIYWEA---------ND--------PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVII 262 (778)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~---------~~--------~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai 262 (778)
+++.++|+++++ .+||++|+.+.. .+ .+..+.+||+||.++++++|++|.++|+++||+|+|
T Consensus 58 ~t~~~l~~~~~~-~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai 136 (696)
T PLN02387 58 TTLAALFEQSCK-KYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAI 136 (696)
T ss_pred CCHHHHHHHHHH-HCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 467899999999 899999995421 00 123456999999999999999999999999999999
Q ss_pred EeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCcc
Q 004034 263 YLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVD 342 (778)
Q Consensus 263 ~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (778)
+++|++||++++|||+++|+++||+++.++.+++.++|++++++++|+++... ..+......+ +.++
T Consensus 137 ~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~---------~~l~~~~~~~----~~l~ 203 (696)
T PLN02387 137 FADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL---------KKLIDISSQL----ETVK 203 (696)
T ss_pred EcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH---------HHHHHHhhcc----CCce
Confidence 99999999999999999999999999999999999999999999999975431 1122222222 4566
Q ss_pred EEEEEccCCccccccc-cCCCCcccchhhccCCCCC-CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHH
Q 004034 343 VCLTYENQSAMTRENT-KWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF 420 (778)
Q Consensus 343 ~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~ 420 (778)
.++.+++......... .........|.+....... ..+.....++|+++|+|||||||.||||+++|++++.+.....
T Consensus 204 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~ 283 (696)
T PLN02387 204 RVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVM 283 (696)
T ss_pred EEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHH
Confidence 7777764321000000 0000011234433322111 1122334689999999999999999999999999765544433
Q ss_pred HHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCC-----hhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 421 KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPD-----SGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 421 ~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~-----~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
....++.++|++++++|++|+++.... +..+..|+++.+.... ...+ +..+++.++++++|++.++|++++.|
T Consensus 284 ~~~~~~~~~d~~l~~lPl~Hi~~~~~~-~~~~~~g~~i~~g~~~-~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l 361 (696)
T PLN02387 284 TVVPKLGKNDVYLAYLPLAHILELAAE-SVMAAVGAAIGYGSPL-TLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRV 361 (696)
T ss_pred hhcCCCCCCCEEEEECcHHHHHHHHHH-HHHHHhCCEEEECChh-hhcccccccccCchhhHHHhCCcEEEehhHHHHHH
Confidence 333467889999999999999886543 3456778777653221 1101 23456789999999999999999988
Q ss_pred HhcCCcccc--------------------------------------------cCCC-CceeEEEEecCCCCHHHHHHHH
Q 004034 496 MRDGNEYVT--------------------------------------------RYSR-KSLRVLGSVGEPINPSAWRWFF 530 (778)
Q Consensus 496 ~~~~~~~~~--------------------------------------------~~~l-~sLr~v~~gGe~l~~~~~~~~~ 530 (778)
.+....... +..+ +++|.+++||+++++++.+++.
T Consensus 362 ~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~ 441 (696)
T PLN02387 362 RDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFIN 441 (696)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHH
Confidence 753210000 0001 5899999999999999988887
Q ss_pred HHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEEC-CCCce-e--CCCeeeEEEEecCCCcccc
Q 004034 531 NVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVE-I--EGECSGYLCIKSSWPGAFR 606 (778)
Q Consensus 531 ~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd-~~g~~-~--~~g~~GEL~v~g~~p~v~~ 606 (778)
..+| +++++.||+||+++..+..... ....+++|+|+++++++|+| +++.. + .++..|||+|+| |++++
T Consensus 442 ~~~g---~~v~~~YG~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrG--p~v~~ 514 (696)
T PLN02387 442 ICLG---APIGQGYGLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGG--PSVTL 514 (696)
T ss_pred HHcC---CCeeEeechhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEecc--Ccccc
Confidence 7776 7899999999998765543332 23568999999999999998 44432 2 233469999999 89999
Q ss_pred cccCChhhhhhhccCCCCC--eEEcCcEEEEecCCeEEEEeecCCEEEeC-ceeeCHHHHHHHHhcCCccceEEEEEEec
Q 004034 607 TLYGDHERYETTYFKPFPG--YYFTGDGCSRDKDGYHWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCAEAAVVGVEH 683 (778)
Q Consensus 607 gY~~~~~~~~~~~~~~~~G--~yrTGDl~~~~~dG~l~~~GR~dd~Iki~-G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~ 683 (778)
|||++++.+.+.|..+.+| ||+|||+|++|+||+|+|+||+||+||++ |++|+|.|||++|.+||.|.+++|++.+.
T Consensus 515 GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~ 594 (696)
T PLN02387 515 GYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPF 594 (696)
T ss_pred hhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCC
Confidence 9999999999887543345 99999999999999999999999999995 99999999999999999999999998542
Q ss_pred CCCCeEEEEEEEEcCCC----------C--------CCHHHHHHHHHHHH-----hhcCCCccccEEEECCCCC------
Q 004034 684 EVKGQGIYAFVTLVEGV----------P--------YSEELRKSLVLAVR-----KQIGAFAAPDKIHWAPGLP------ 734 (778)
Q Consensus 684 ~~~~~~lva~Vv~~~~~----------~--------~~~~l~~~l~~~l~-----~~Lp~~~~P~~i~~v~~lP------ 734 (778)
...++|+|++.+.. . .++++.+++.+.+. .+|+.|.+|+.|.++++-.
T Consensus 595 ---~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~ 671 (696)
T PLN02387 595 ---HSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGL 671 (696)
T ss_pred ---cceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCc
Confidence 34688999985421 0 01233444444443 3699999999999988643
Q ss_pred CCCCCcccHHHHHHHHhcccCcCC
Q 004034 735 KTRSGKIMRRILRKIASRQLDELG 758 (778)
Q Consensus 735 ~T~sGKi~R~~L~~~~~~~~~~~~ 758 (778)
+|++.|+.|+.+++.+++++++++
T Consensus 672 lT~t~K~~R~~i~~~y~~~i~~ly 695 (696)
T PLN02387 672 VTAALKLKREQIRKKFKDDLKKLY 695 (696)
T ss_pred CChhhhhhhHHHHHHHHHHHHHHh
Confidence 678889999999999998877654
No 85
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-64 Score=584.54 Aligned_cols=512 Identities=22% Similarity=0.283 Sum_probs=408.4
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
.+.++|+++++ .+|+++|++.. .+++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 11 ~l~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~ 83 (540)
T PRK06164 11 TLASLLDAHAR-ARPDAVALIDE------DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARL 83 (540)
T ss_pred CHHHHHHHHHH-hCCCCeEEecC------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 47889999998 89999999954 678999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+++.++.+++.+++++++++++|++++... +.+...+....... .+.+..++.++.... . .
T Consensus 84 G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~--~ 150 (540)
T PRK06164 84 GATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKG----IDFAAILAAVPPDA---LPPLRAIAVVDDAAD----A--T 150 (540)
T ss_pred CcEEEecCCCCCcHHHHHHHHhcCccEEEEcccccc----ccHHHHhhcccccc---cCCcceEEEeccCcc----c--C
Confidence 999999999999999999999999999999776421 12222222211110 023344444431110 0 0
Q ss_pred CCCcccchhhccCCCCCC-C---CccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeC
Q 004034 361 QDGRDIWWQDVVPKYPTK-C---EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 436 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~-~---~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~ 436 (778)
.......+.......... . ......++++++++|||||||+||||+++|.+++. ........+++.+++++++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~l~~~ 229 (540)
T PRK06164 151 PAPAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLR-HARAIARAYGYDPGAVLLAAL 229 (540)
T ss_pred CCCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHH-HHHHHHHhcCCCCCCEEEEcC
Confidence 000000111111100000 0 01223468899999999999999999999999554 444556678889999999999
Q ss_pred CcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEE
Q 004034 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGS 516 (778)
Q Consensus 437 ~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~ 516 (778)
|++|.+|+ ..++.+|..|+++++.+. +++..+++.|+++++|+++++|++++.|.+.. ....+++++|.+.+
T Consensus 230 p~~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~---~~~~~~~~l~~~~~ 301 (540)
T PRK06164 230 PFCGVFGF-STLLGALAGGAPLVCEPV----FDAARTARALRRHRVTHTFGNDEMLRRILDTA---GERADFPSARLFGF 301 (540)
T ss_pred CchhHHHH-HHHHHHHhcCceEEecCC----CCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh---cccCCCcceeeeee
Confidence 99999985 578999999999998753 48899999999999999999999999998872 23457889998877
Q ss_pred ec-CCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC-CCCCCCCcCcCc-CCceEEEECC-CCceeCCCee
Q 004034 517 VG-EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPF-FGVQPVIVDE-KGVEIEGECS 592 (778)
Q Consensus 517 gG-e~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~-~~~~~~~~G~p~-~g~~~~Ivd~-~g~~~~~g~~ 592 (778)
+| .+...++.+++.+. + +++++.||+||++.+++...... ......+.|.|+ +++.++|+|+ ++++++.|+.
T Consensus 302 ~~~~~~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~ 377 (540)
T PRK06164 302 ASFAPALGELAALARAR-G---VPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGES 377 (540)
T ss_pred ccCCcchHHHHHHHhhc-C---CceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCe
Confidence 66 55666777776654 3 78999999999987654332211 112334568876 7999999995 7889999999
Q ss_pred eEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCc
Q 004034 593 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 672 (778)
Q Consensus 593 GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~ 672 (778)
|||+|+| |+++.||+++++.+...+.. +|||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+||+
T Consensus 378 Gel~v~g--~~~~~gY~~~~~~t~~~~~~--~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~ 453 (540)
T PRK06164 378 GEIEIRA--PSLMRGYLDNPDATARALTD--DGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPG 453 (540)
T ss_pred eEEEEec--ccccccccCCchhhhhcccC--CCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCC
Confidence 9999999 89999999999988877654 6899999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCC---cccHHHHHHH
Q 004034 673 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSG---KIMRRILRKI 749 (778)
Q Consensus 673 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sG---Ki~R~~L~~~ 749 (778)
|.+++|++++. .+++.++++|++.++...+ .++|+++++++||+|++|+.|++++++|+|++| |++|+.|+++
T Consensus 454 v~~~~v~~~~~-~~~~~~~~~vv~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~ 529 (540)
T PRK06164 454 VAAAQVVGATR-DGKTVPVAFVIPTDGASPD---EAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREM 529 (540)
T ss_pred ceeEEEEecCC-CCceeEEEEEEeCCCCCCC---HHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHH
Confidence 99999999884 4567899999987664433 578999999999999999999999999999999 9999999998
Q ss_pred Hhcc
Q 004034 750 ASRQ 753 (778)
Q Consensus 750 ~~~~ 753 (778)
++..
T Consensus 530 ~~~~ 533 (540)
T PRK06164 530 AQAR 533 (540)
T ss_pred HHHh
Confidence 7654
No 86
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-64 Score=581.67 Aligned_cols=485 Identities=23% Similarity=0.294 Sum_probs=397.1
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~-Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
.+..+|++++ .++++|+++. ++++||.||+++++++|++|+++ |++++++|+|+++|++++++++|||++
T Consensus 6 ~~~~~l~~~a---~~~~~a~~~~------~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~ 76 (529)
T PRK07867 6 TVAELLLPLA---EDDDRGLYFE------DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAAL 76 (529)
T ss_pred cHHHHHHHhc---ccCCceEEEC------CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4677887765 3789999876 57899999999999999999997 899999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccccc
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (778)
+|++++|++|.++.+++.+++++++++++|+++.... . ++.+. ..+. ++..+.
T Consensus 77 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~---------~----~~~~~---~~~~-~~~~~~---------- 129 (529)
T PRK07867 77 SGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAE---------L----LDGLD---PGVR-VINVDS---------- 129 (529)
T ss_pred cCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHH---------H----HHhhc---cCce-EEEecc----------
Confidence 9999999999999999999999999999999875421 1 11110 1111 222211
Q ss_pred CCCCcccchhhccCCC-CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCc
Q 004034 360 WQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 438 (778)
Q Consensus 360 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 438 (778)
..|.+.+... ..........++++++|+|||||||.||||+++|+++. .........+++.++|++++.+|+
T Consensus 130 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~-~~~~~~~~~~~~~~~d~~l~~~pl 202 (529)
T PRK07867 130 ------PAWADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVA-SAGVMLAQRFGLGPDDVCYVSMPL 202 (529)
T ss_pred ------ccHHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHH-HHHHHHHHhhCCCcccEEEEecch
Confidence 0122222211 11122234567999999999999999999999999964 444445667889999999999999
Q ss_pred chhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEec
Q 004034 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (778)
Q Consensus 439 ~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gG 518 (778)
+|..++...++.+|..|+++++.+. +++..+++.++++++|++..+|+.+..++..... .....+++|. ++||
T Consensus 203 ~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~--~~~~~~~lr~-~~gg 275 (529)
T PRK07867 203 FHSNAVMAGWAVALAAGASIALRRK----FSASGFLPDVRRYGATYANYVGKPLSYVLATPER--PDDADNPLRI-VYGN 275 (529)
T ss_pred hHHHHHHHHHHHHHhcCceEEecCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCc--ccccccceEE-EecC
Confidence 9999877777889999999998753 4889999999999999999999999998876432 1123357884 5688
Q ss_pred CCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEEC-CCCceeCCCe------
Q 004034 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGEC------ 591 (778)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd-~~g~~~~~g~------ 591 (778)
+++++.. .++.+.+| +++++.||+||++...... + ...++++|.|+++ ++|+| +++++++.|+
T Consensus 276 ~~~~~~~-~~~~~~~g---~~l~~~YG~TE~~~~~~~~-~---~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~ 345 (529)
T PRK07867 276 EGAPGDI-ARFARRFG---CVVVDGFGSTEGGVAITRT-P---DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRL 345 (529)
T ss_pred CCChHHH-HHHHHHhC---CcEEEeecccccccccccC-C---CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccc
Confidence 8888765 56677776 6899999999998654321 1 1345789999999 66777 4788899888
Q ss_pred ------eeEEEE-ecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHH
Q 004034 592 ------SGYLCI-KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVE 664 (778)
Q Consensus 592 ------~GEL~v-~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE 664 (778)
.|||++ +| |+++.||+++++.+...+- +|||+|||+++++++|+++|+||.||+||++|++|+|.|||
T Consensus 346 ~~~~~~~Gel~i~~g--~~~~~gy~~~~~~~~~~~~---~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE 420 (529)
T PRK07867 346 LNADEAIGELVNTAG--PGGFEGYYNDPEADAERMR---GGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIE 420 (529)
T ss_pred cccCCcceEEEEecC--CcccccccCChHhhhhhhc---CCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHH
Confidence 899999 99 8999999999988776552 68999999999999999999999999999999999999999
Q ss_pred HHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--cCCCccccEEEECCCCCCCCCCccc
Q 004034 665 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ--IGAFAAPDKIHWAPGLPKTRSGKIM 742 (778)
Q Consensus 665 ~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~--Lp~~~~P~~i~~v~~lP~T~sGKi~ 742 (778)
++|.+||+|.+|+|++++++..++.++++|+..++...+ .++++++++++ |+.|++|..|+++++||+|++||++
T Consensus 421 ~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~ 497 (529)
T PRK07867 421 RILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFD---PDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVL 497 (529)
T ss_pred HHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCC---HHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCccee
Confidence 999999999999999999998899999999998765444 56788888775 9999999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 004034 743 RRILRKIASRQ 753 (778)
Q Consensus 743 R~~L~~~~~~~ 753 (778)
|+.|+++....
T Consensus 498 r~~L~~~~~~~ 508 (529)
T PRK07867 498 KRQLSAEGVDC 508 (529)
T ss_pred HHHHHHhcCCC
Confidence 99999987643
No 87
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-64 Score=582.74 Aligned_cols=477 Identities=22% Similarity=0.253 Sum_probs=394.6
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+...|.++++ .+||++|+++. .+.+||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|
T Consensus 37 ~~~~~~~~a~-~~p~~~a~~~~------~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G 109 (516)
T PRK13383 37 PYTLLAVTAA-RWPGRTAIIDD------DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLG 109 (516)
T ss_pred HHHHHHHHHH-HCCCCcEEEeC------CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 5666788888 89999999875 5689999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++.+++++++++++++++.... . +... ...++.++....
T Consensus 110 ~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~----~~~~------~~~~~~~~~~~~--------- 161 (516)
T PRK13383 110 ADVVPISTEFRSDALAAALRAHHISTVVADNEFAE---------R----IAGA------DDAVAVIDPATA--------- 161 (516)
T ss_pred eEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHH---------H----HHhh------hcceEEeccchh---------
Confidence 99999999999999999999999999999875421 1 1111 011222221100
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHH--HHHHHHhhCCCCCcEEEEeCCcc
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCG 439 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~ 439 (778)
.... . ...+...++.++|+|||||||+||||+++|... ... .......+++.++|+++...|++
T Consensus 162 ---------~~~~-~---~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~pl~ 227 (516)
T PRK13383 162 ---------GAEE-S---GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLR-SAVGVWVTILDRTRLRTGSRISVAMPMF 227 (516)
T ss_pred ---------hhhc-C---CCCCCCCCCCcEEEECCCCCCCCCeeeecchhh-hhhhhHHhHHhhhccCCCCeEEEecCCc
Confidence 0000 0 001123456789999999999999999999742 211 11122346788899999999999
Q ss_pred hhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 440 ~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
|.+++ ..++.++..|+++++... ++++.+++.++++++|.+.++|++++.|...........+++++|.+++||+
T Consensus 228 h~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~ 302 (516)
T PRK13383 228 HGLGL-GMLMLTIALGGTVLTHRH----FDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGD 302 (516)
T ss_pred chhhH-HHHHHHHhcCCEEEECCC----CCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCC
Confidence 99986 456778999999987642 5889999999999999999999999999876432222345789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEec
Q 004034 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (778)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g 599 (778)
+++++++++|.+.++ +.+++.||+||++........ .....++++|+|+++++++|+|+++++++.|+.|||+++|
T Consensus 303 ~l~~~~~~~~~~~~g---~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g 378 (516)
T PRK13383 303 RLDPTLGQRFMDTYG---DILYNGYGSTEVGIGALATPA-DLRDAPETVGKPVAGCPVRILDRNNRPVGPRVTGRIFVGG 378 (516)
T ss_pred CCCHHHHHHHHHHcC---chhhhcccccccccceecccc-ccccCCCcccCCCCCcEEEEECCCCCCCCCCCceEEEEec
Confidence 999999999999987 679999999999865543321 1234567899999999999999999999999999999999
Q ss_pred CCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEE
Q 004034 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 679 (778)
Q Consensus 600 ~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv 679 (778)
+.++.+|++++... + .+|||+|||++++|++|+++++||.||+||++|++|+|.|||++|.+||.|.+++|+
T Consensus 379 --~~~~~~Y~~~~~~~----~--~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv 450 (516)
T PRK13383 379 --ELAGTRYTDGGGKA----V--VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVI 450 (516)
T ss_pred --CcccccccCCchhh----e--ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 88999999876421 1 268999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 680 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 680 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
++++...++.+.++|+.+++...+ .++|+++++++++.|++|..|+++++||+|++||++|+.|+
T Consensus 451 ~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 451 GVPDERFGHRLAAFVVLHPGSGVD---AAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred eccccccCceEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 999888889999999987654433 46899999999999999999999999999999999999985
No 88
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.5e-64 Score=588.02 Aligned_cols=510 Identities=22% Similarity=0.293 Sum_probs=406.2
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLK-DIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~-~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
.+.++|.++++ .+|+++|+++. ++++||+||.++++++|+.|. +.|+++||+|+++++|++++++++|||++
T Consensus 26 ~~~~~l~~~~~-~~~~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 98 (560)
T PRK08751 26 TVAEVFATSVA-KFADRPAYHSF------GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLR 98 (560)
T ss_pred cHHHHHHHHHH-hCCCCceEEEC------CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 47788999998 89999999975 678999999999999999997 68999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccc-----
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT----- 354 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----- 354 (778)
+|++++|++|.++.+++.+++++++++++++++... ..+.+.... .....++..+......
T Consensus 99 ~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 164 (560)
T PRK08751 99 AGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFG---------TTVQQVIAD-----TPVKQVITTGLGDMLGFPKAA 164 (560)
T ss_pred hCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhH---------HHHHHHhhC-----CCccEEEEechhhhcccccch
Confidence 999999999999999999999999999999987542 112222111 1122233221000000
Q ss_pred ---------cc-cccCCCCcccchhhccCCCC-CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHh
Q 004034 355 ---------RE-NTKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 423 (778)
Q Consensus 355 ---------~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~ 423 (778)
.. ...........|.+.+.... ...+.....++++++|+|||||||.||||+++|.+++.+.... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~ 243 (560)
T PRK08751 165 LVNFVVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA-HQW 243 (560)
T ss_pred hhhhhhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHH-HHh
Confidence 00 00000011122222222111 1122334567899999999999999999999999965544332 223
Q ss_pred hC----CCCC-cEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhc
Q 004034 424 FD----YKPS-DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 498 (778)
Q Consensus 424 ~~----~~~~-d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~ 498 (778)
++ +.++ +++++..++.|..++....+.++..|+++++.... .++..+++.++++++|++..+|+++..+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 320 (560)
T PRK08751 244 LAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNP---RDMPGFVKELKKTRFTAFTGVNTLFNGLLNT 320 (560)
T ss_pred hccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCc---CCHHHHHHHHHhcceeEecChHHHHHHHHcC
Confidence 32 3343 57788899999888666667778888888777542 4788999999999999999999999999886
Q ss_pred CCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEE
Q 004034 499 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 578 (778)
Q Consensus 499 ~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~ 578 (778)
.. ..+.++++||.+++||+++++.+.+.+.+.++ +++++.||+||++..++.... .....++++|.|++++.++
T Consensus 321 ~~--~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~~~~v~ 394 (560)
T PRK08751 321 PG--FDQIDFSSLKMTLGGGMAVQRSVAERWKQVTG---LTLVEAYGLTETSPAACINPL-TLKEYNGSIGLPIPSTDAC 394 (560)
T ss_pred cC--cCCcchhhheeeeeCCCCCCHHHHHHHHHHhC---CeEEEeeccccCCCceecccc-cccccCCCcCccCCCceEE
Confidence 43 23456789999999999999999999998876 689999999999876543321 1123467899999999999
Q ss_pred EECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceee
Q 004034 579 IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRI 658 (778)
Q Consensus 579 Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI 658 (778)
|+|+++++++.|+.|||+|+| +.+++||+++++.+...+. .+|||+|||+|+++++|+++++||.||+||++|++|
T Consensus 395 i~d~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v 470 (560)
T PRK08751 395 IKDDAGTVLAIGEIGELCIKG--PQVMKGYWKRPEETAKVMD--ADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNV 470 (560)
T ss_pred EECCCCCCCCCCCceEEEEec--CccchhhcCChhhhhhccc--cCCCccccceEEEcCCceEEEEeechhheeECCEEE
Confidence 999999999999999999999 8899999999988776553 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCC
Q 004034 659 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRS 738 (778)
Q Consensus 659 ~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~s 738 (778)
+|.|||++|.+||+|.+++|+++++...++.++++++.... ..+ .++|+++++++++.|++|..|+++++||+|++
T Consensus 471 ~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~-~~~---~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~ 546 (560)
T PRK08751 471 YPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKDP-ALT---AEDVKAHARANLTGYKQPRIIEFRKELPKTNV 546 (560)
T ss_pred cHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCCC-CCC---HHHHHHHHHHhhhhccCCeEEEEhhhCCCCcc
Confidence 99999999999999999999999988778888888876532 222 56899999999999999999999999999999
Q ss_pred CcccHHHHHHH
Q 004034 739 GKIMRRILRKI 749 (778)
Q Consensus 739 GKi~R~~L~~~ 749 (778)
||++|++|++.
T Consensus 547 gKv~r~~L~~~ 557 (560)
T PRK08751 547 GKILRRELRDA 557 (560)
T ss_pred ccccHHHHHHh
Confidence 99999999876
No 89
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.3e-64 Score=581.74 Aligned_cols=469 Identities=25% Similarity=0.382 Sum_probs=354.6
Q ss_pred eCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccE
Q 004034 264 LPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDV 343 (778)
Q Consensus 264 ~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (778)
+||++|+++++|||+++|++++|+++.++++++.++|++++++++|+++......+.... +.+.... ....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~---~~~~~~~-----~~~~- 71 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPL---YSKVVEA-----APAK- 71 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecc---hhhhhhc-----ccce-
Confidence 689999999999999999999999999999999999999999999998653211111111 1111111 1112
Q ss_pred EEEEccCCccccccccCCCCcccchhhccCCC-------CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHH
Q 004034 344 CLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-------PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT 416 (778)
Q Consensus 344 vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~ 416 (778)
.+++....... .... ......|.+.+... ..........++|+++|+|||||||.||||+++|++++.+.
T Consensus 72 ~i~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~ 148 (499)
T PLN03051 72 AIVLPAAGEPV--AVPL-REQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCA 148 (499)
T ss_pred EEEEeccCccc--CCcc-ccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHH
Confidence 22222110000 0000 00122344433110 00111122356899999999999999999999999965543
Q ss_pred HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHH
Q 004034 417 ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 496 (778)
Q Consensus 417 ~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~ 496 (778)
. .....+++.++|++++.+|++|+.+. +.++.+|+.|+++++.+.. +++..+++.|+++++|++.++|++++.|+
T Consensus 149 ~-~~~~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~---~~~~~~~~~i~~~~vt~~~~vP~~~~~l~ 223 (499)
T PLN03051 149 S-DGWAHMDIQPGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGA---PLGRGFGKFVQDAGVTVLGLVPSIVKAWR 223 (499)
T ss_pred H-HHHHhcCCCCCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCC---CCcHHHHHHHHHhCCcEEEeCHHHHHHHH
Confidence 3 33345788899999999999999884 5788999999999998642 36789999999999999999999999998
Q ss_pred hcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCce
Q 004034 497 RDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQ 576 (778)
Q Consensus 497 ~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~ 576 (778)
+.........++++||.+++|||++++++.+++.+..+. ++++++.||+||++...+..... .+.+++++|+|+++++
T Consensus 224 ~~~~~~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~p~~~~~ 301 (499)
T PLN03051 224 HTGAFAMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGY-YKPVIEYCGGTELASGYISSTLL-QPQAPGAFSTASLGTR 301 (499)
T ss_pred hcCccccccCCchhheEEEecCCCCCHHHHHHHHHhccc-cceeEeeeccccccceeeccccc-CCCCCccccCCCCCce
Confidence 754211234577899999999999999999888774321 26799999999987543322211 1345678999999999
Q ss_pred EEEECCCCceeCCC--eeeEEEEecCCCcccccccCChhhhhhhccCC-------CCCeEEcCcEEEEecCCeEEEEeec
Q 004034 577 PVIVDEKGVEIEGE--CSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-------FPGYYFTGDGCSRDKDGYHWLTGRV 647 (778)
Q Consensus 577 ~~Ivd~~g~~~~~g--~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~-------~~G~yrTGDl~~~~~dG~l~~~GR~ 647 (778)
++|+|++|++++.| +.|||+|+||+.+++.|||+++. ...++.. ..+||+|||+|++|+||+|+|+||.
T Consensus 302 ~~ivd~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~--~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~ 379 (499)
T PLN03051 302 FVLLNDNGVPYPDDQPCVGEVALAPPMLGASDRLLNADH--DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRA 379 (499)
T ss_pred EEEECCCCCCCCCCCCcceEEEEecCcCCCCccccCCcc--cceeeecCCccccCCcceeecCCeEEECCCCcEEEEecc
Confidence 99999999999988 58999999954445789998653 2333321 1237999999999999999999999
Q ss_pred CCEEEeCceeeCHHHHHHHHhc-CCccceEEEEEEecCCCC-eEEEEEE---EEcCCC-C-CCHHHHHHHHHHHHhhcCC
Q 004034 648 DDVINVSGHRIGTAEVESALVS-HPQCAEAAVVGVEHEVKG-QGIYAFV---TLVEGV-P-YSEELRKSLVLAVRKQIGA 720 (778)
Q Consensus 648 dd~Iki~G~rI~~~eIE~~L~~-~p~V~ea~Vv~~~~~~~~-~~lva~V---v~~~~~-~-~~~~l~~~l~~~l~~~Lp~ 720 (778)
||+||++|+||+|.|||++|.+ ||+|.||+|++++|+..+ +.++||| +++++. . ..+++.+.++++|+++|++
T Consensus 380 ~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~ 459 (499)
T PLN03051 380 DDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNP 459 (499)
T ss_pred CCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999996 999999999999998888 7899999 776653 2 2255667777788888998
Q ss_pred CccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 721 FAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 721 ~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
|+.|..|+++++||+|++|||+|++|++.+.+.
T Consensus 460 ~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 492 (499)
T PLN03051 460 LFKVSRVKIVPELPRNASNKLLRRVLRDQLKKE 492 (499)
T ss_pred ccCCceEEEcCCCCCCCCccHHHHHHHHHHHHh
Confidence 877878999999999999999999999887644
No 90
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-64 Score=576.24 Aligned_cols=455 Identities=22% Similarity=0.315 Sum_probs=386.5
Q ss_pred cCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCC
Q 004034 213 GLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFS 292 (778)
Q Consensus 213 ~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~ 292 (778)
+.++++|+++. ++++||+||.++++++|..|+ ++|+|+|+++|++++++++|||+++|++++|++|.++
T Consensus 12 ~~~~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~ 80 (471)
T PRK07787 12 AADIADAVRIG------GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSG 80 (471)
T ss_pred ccCCceEEEeC------CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCC
Confidence 67899999986 689999999999999999996 5799999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhcc
Q 004034 293 SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVV 372 (778)
Q Consensus 293 ~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l 372 (778)
.+++.+++++++++++++++.... ..+... .+... . ..|.
T Consensus 81 ~~~l~~~l~~~~~~~il~~~~~~~----------------------~~~~~~-~~~~~------~--------~~~~--- 120 (471)
T PRK07787 81 VAERRHILADSGAQAWLGPAPDDP----------------------AGLPHV-PVRLH------A--------RSWH--- 120 (471)
T ss_pred hHHHHHHHHhcCCCEEEecCCccc----------------------ccccce-eeecc------c--------cccc---
Confidence 999999999999999999753110 001000 00000 0 0000
Q ss_pred CCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHH
Q 004034 373 PKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPM 452 (778)
Q Consensus 373 ~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L 452 (778)
......++|+++|+|||||||.||||+++|++++.+ .......+++.++|++++.+|+.|..|+...++.++
T Consensus 121 -------~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 192 (471)
T PRK07787 121 -------RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAAD-LDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPL 192 (471)
T ss_pred -------cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHH-HHHHHHhcCCCccceeEeccCCeeechhHHHHHHHH
Confidence 011235789999999999999999999999996544 444455678889999999999999999888899999
Q ss_pred hcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHH
Q 004034 453 LNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNV 532 (778)
Q Consensus 453 ~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (778)
..|+++++.+. +++..+++.++ +++|++.++|+++..|.+... ....++++|.+++||+++++++++++.+.
T Consensus 193 ~~G~~~~~~~~----~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~---~~~~l~~l~~~~~gg~~~~~~~~~~~~~~ 264 (471)
T PRK07787 193 RIGNRFVHTGR----PTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE---AARALRGARLLVSGSAALPVPVFDRLAAL 264 (471)
T ss_pred hcCCEEEecCC----CCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc---ccccccceeEEEECCCCCCHHHHHHHHHH
Confidence 99999998754 48999999999 999999999999999987532 12367899999999999999999999988
Q ss_pred hCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeC-CC-eeeEEEEecCCCcccccccC
Q 004034 533 VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIE-GE-CSGYLCIKSSWPGAFRTLYG 610 (778)
Q Consensus 533 ~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~-~g-~~GEL~v~g~~p~v~~gY~~ 610 (778)
++ .++++.||+||++........ ....++++|+|+++++++|+|+++++++ .| +.|||+++| +++++||++
T Consensus 265 ~~---~~~~~~YG~tE~~~~~~~~~~--~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~~Gei~v~g--~~~~~gy~~ 337 (471)
T PRK07787 265 TG---HRPVERYGMTETLITLSTRAD--GERRPGWVGLPLAGVETRLVDEDGGPVPHDGETVGELQVRG--PTLFDGYLN 337 (471)
T ss_pred cC---CCeecccCccccCcceecCCC--CcccCCcccccCCCcEEEEECCCCCCCCCCCCCceEEEEEC--cccchhhcC
Confidence 76 679999999999865433221 1345678999999999999999999887 34 489999999 899999999
Q ss_pred ChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeec-CCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeE
Q 004034 611 DHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRV-DDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQG 689 (778)
Q Consensus 611 ~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~-dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~ 689 (778)
+++.+...|.. +|||+|||+|++++||+++++||+ ||+||++|++|+|.|||++|.+||.|++++|++.++...++.
T Consensus 338 ~~~~t~~~~~~--~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 415 (471)
T PRK07787 338 RPDATAAAFTA--DGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQR 415 (471)
T ss_pred ChhhchhcccC--CCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeE
Confidence 99988777653 689999999999999999999996 899999999999999999999999999999999998877899
Q ss_pred EEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHH
Q 004034 690 IYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 748 (778)
Q Consensus 690 lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~ 748 (778)
+++||+..... + .++|+++++++|++|++|..|+++++||+|++||++|++|++
T Consensus 416 ~~a~v~~~~~~--~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 416 IVAYVVGADDV--A---ADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred EEEEEEeCCCC--C---HHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhcc
Confidence 99999984332 2 568999999999999999999999999999999999999976
No 91
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.8e-65 Score=601.20 Aligned_cols=531 Identities=18% Similarity=0.214 Sum_probs=399.8
Q ss_pred cccHHHHHHHHhhhccCCCeEEEEEEc---CCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHH
Q 004034 198 ITNICYNCLDRNIEAGLGDKVAIYWEA---NDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAM 274 (778)
Q Consensus 198 ~~n~~~~~l~~~~~~~~pd~~Al~~~~---~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~ 274 (778)
.+++++++|+++++ ++|+++|+.+.. ...+..+.+||+||.++++++|..|+++|+++||+|+|+++|++||++++
T Consensus 40 ~~~t~~~~~~~~~~-~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~ 118 (660)
T PLN02430 40 DITTAWDIFSKSVE-KYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAM 118 (660)
T ss_pred CCCCHHHHHHHHHH-hCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 45678999999998 899999997642 11122356899999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccc
Q 004034 275 LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 354 (778)
Q Consensus 275 LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 354 (778)
|||+++|++++|+++.++++++.+++++++++++|+++... ...+...... .+.++.++.++......
T Consensus 119 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~--------~~~~~~~~~~----~~~l~~ii~~~~~~~~~ 186 (660)
T PLN02430 119 EACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKI--------KELLEPDCKS----AKRLKAIVSFTSVTEEE 186 (660)
T ss_pred HHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHH--------HHHHhhhccc----CCCceEEEEECCCChHH
Confidence 99999999999999999999999999999999999875421 1111111111 13455666664321100
Q ss_pred cccccCCCCcccchhhccCCCCC-CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHH--h--hCCCCC
Q 004034 355 RENTKWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY--A--FDYKPS 429 (778)
Q Consensus 355 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~--~--~~~~~~ 429 (778)
.............|++.+..... ........++|+++|+|||||||.||||+++|++++.+....... . .++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~ 266 (660)
T PLN02430 187 SDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHD 266 (660)
T ss_pred hhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCC
Confidence 00000000012345444322111 111223468999999999999999999999999976544322111 1 256789
Q ss_pred cEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc------cc
Q 004034 430 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE------YV 503 (778)
Q Consensus 430 d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~------~~ 503 (778)
|++++++|++|+.+.... +.++..|++++++.. ++..+++.|+++++|++.++|.+++.+.+.... ..
T Consensus 267 d~~ls~lPl~H~~~~~~~-~~~l~~G~~i~~~~~-----~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~ 340 (660)
T PLN02430 267 DVYLSFLPLAHILDRMIE-EYFFRKGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPR 340 (660)
T ss_pred CEEEEeCcHHHHHHHHHH-HHHHHcCCEEEEeCC-----ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHH
Confidence 999999999999886554 457889999988753 567899999999999999999999887642100 00
Q ss_pred -----------------------ccC-------------CC-CceeEEEEecCCCCHHHHHHHHHHhCCCCcceeccccc
Q 004034 504 -----------------------TRY-------------SR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQ 546 (778)
Q Consensus 504 -----------------------~~~-------------~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~ 546 (778)
... .+ ++||.+++||+++++++.+++. .++ .+++++.||+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~--~~~i~~~YG~ 417 (660)
T PLN02430 341 RRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTS--CAFVVQGYGL 417 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-Hhc--CCCeeeecch
Confidence 000 01 5899999999999999876654 444 2679999999
Q ss_pred ccccceecccCCCCCCCCCCCcCcCcCCceEEEEC--CCC-ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCC
Q 004034 547 TETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD--EKG-VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 623 (778)
Q Consensus 547 TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd--~~g-~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~ 623 (778)
||+++..+...+.. ...++++|+|+++++++++| +.+ .+++.+..|||+|+| |++++|||++++.+.+.+ .
T Consensus 418 TE~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg--~~v~~GY~~~~e~t~~~~-~-- 491 (660)
T PLN02430 418 TETLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRG--KCLFSGYYKNPELTEEVM-K-- 491 (660)
T ss_pred hhhhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecC--CCccccccCChHHhhhhh-h--
Confidence 99987655443322 23578999999999999986 333 456666789999999 899999999999888776 2
Q ss_pred CCeEEcCcEEEEecCCeEEEEeecCCEEEeC-ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCC--
Q 004034 624 PGYYFTGDGCSRDKDGYHWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV-- 700 (778)
Q Consensus 624 ~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~-G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~-- 700 (778)
+|||+|||+|++|+||+|+|+||+||+||++ |++|+|.+||++|.+||.|.+|+|++. ..++.++|+|++++..
T Consensus 492 dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~---~~~~~~~A~vv~~~~~~~ 568 (660)
T PLN02430 492 DGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGD---SFKSMLVAVVVPNEENTN 568 (660)
T ss_pred ccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEec---CCcceEEEEEEcCHHHHH
Confidence 7999999999999999999999999999985 999999999999999999999999983 2357899999986421
Q ss_pred --------C-------CCHHHHHHHHHHHH-----hhcCCCccccEEEECCC-C-----CCCCCCcccHHHHHHHHhccc
Q 004034 701 --------P-------YSEELRKSLVLAVR-----KQIGAFAAPDKIHWAPG-L-----PKTRSGKIMRRILRKIASRQL 754 (778)
Q Consensus 701 --------~-------~~~~l~~~l~~~l~-----~~Lp~~~~P~~i~~v~~-l-----P~T~sGKi~R~~L~~~~~~~~ 754 (778)
. ..+++.+.|.+.+. +.|+.|..+++|+++++ | .+|+++|+.|+.+.+.+..++
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i 648 (660)
T PLN02430 569 KWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEI 648 (660)
T ss_pred HHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHH
Confidence 0 11223333333332 35999999999998764 3 489999999999999999888
Q ss_pred CcCCC
Q 004034 755 DELGD 759 (778)
Q Consensus 755 ~~~~~ 759 (778)
+++++
T Consensus 649 ~~ly~ 653 (660)
T PLN02430 649 DEMYR 653 (660)
T ss_pred HHHHH
Confidence 77663
No 92
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-64 Score=578.84 Aligned_cols=501 Identities=24% Similarity=0.336 Sum_probs=407.1
Q ss_pred HhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeC
Q 004034 208 RNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 287 (778)
Q Consensus 208 ~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl 287 (778)
.+++ ++||++|+++.. .++.+||.||.++++++|++|+++|+++|++|++++++++++++++|||+++|++++|+
T Consensus 5 ~~a~-~~p~~~a~~~~~----~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 5 IHAQ-TTPDKPAVIMAS----TGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hhHh-hCCCceEEEecC----CCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 4555 799999998752 25789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccc
Q 004034 288 FAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIW 367 (778)
Q Consensus 288 ~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 367 (778)
++.++.+++.+++++++++++++++... ..+.+....+ ......+.++.... . .....
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~----~-----~~~~~ 137 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKL---------DVARALLKQC----PGVRHRLVLDGDGE----L-----EGFVG 137 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhH---------HHHHHHHhcC----CCceEEEEecCCCC----C-----ccccc
Confidence 9999999999999999999999986532 1122222221 22333333332110 0 01112
Q ss_pred hhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEc--cchHHH--HHHHHHHHhhCCCCCcEEEEeCCcchhhh
Q 004034 368 WQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHT--TGGYMV--HTATTFKYAFDYKPSDVYWCTADCGWITG 443 (778)
Q Consensus 368 ~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~t--h~~~l~--~~~~~~~~~~~~~~~d~~l~~~~~~~~~g 443 (778)
+.+.....+. ....+.++.++|+|||||||.||||+++ |.+... .........+++.+++++++..|++|..+
T Consensus 138 ~~~~~~~~~~---~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~ 214 (511)
T PRK13391 138 YAEAVAGLPA---TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAP 214 (511)
T ss_pred HHHHhcCCCC---CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHH
Confidence 2222221111 1112345679999999999999999964 555321 22333445677888999999999999887
Q ss_pred hhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCH
Q 004034 444 HSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINP 523 (778)
Q Consensus 444 ~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~ 523 (778)
+ ...+.++..|+++++.+. +++..+++.++++++|++..+|+++..+.+.........+++++|.+++||+++++
T Consensus 215 ~-~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~ 289 (511)
T PRK13391 215 Q-RAVMLVIRLGGTVIVMEH----FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPP 289 (511)
T ss_pred H-HHHHHHHHcCceEEECCC----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCH
Confidence 5 455778999999999753 48999999999999999999999999988764433334568899999999999999
Q ss_pred HHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCc
Q 004034 524 SAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPG 603 (778)
Q Consensus 524 ~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~ 603 (778)
++++++.+.+| ..+++.||+||++.+....... ....++++|+|+++ .++|+|+++++++.|+.|||+++| +
T Consensus 290 ~~~~~~~~~~g---~~v~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~Gel~~~g--~- 361 (511)
T PRK13391 290 QVKEQMIDWWG---PIIHEYYAATEGLGFTACDSEE-WLAHPGTVGRAMFG-DLHILDDDGAELPPGEPGTIWFEG--G- 361 (511)
T ss_pred HHHHHHHHHcC---CceeeeeccccccceEEecCcc-ccccCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEec--C-
Confidence 99999999887 5799999999998765433221 23456789999999 699999999999999999999999 7
Q ss_pred ccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEec
Q 004034 604 AFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEH 683 (778)
Q Consensus 604 v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~ 683 (778)
++.||+++++.+...+... +|||+|||++++++||.++++||.||++|++|++|++.|||++|.+||.|.+++|+++++
T Consensus 362 ~~~gy~~~~~~~~~~~~~~-~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~ 440 (511)
T PRK13391 362 RPFEYLNDPAKTAEARHPD-GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPN 440 (511)
T ss_pred cceEEcCChhHhHHhhccC-CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCC
Confidence 8899999998887776542 589999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 684 EVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 684 ~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
+..++.+++++++.++...++.+.++|+++++++||.|++|..|++++++|+|++||++|+.|++.+.+
T Consensus 441 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 441 EDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred cccCceeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 888889999999876654444557899999999999999999999999999999999999999998864
No 93
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=6.1e-64 Score=576.77 Aligned_cols=494 Identities=19% Similarity=0.255 Sum_probs=411.1
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+.++|++++. .+|+++|++.. ++.+||.||.++++++|..|+++|+++||+|+++++|+.++++++|||+++|
T Consensus 4 ~~~~l~~~a~-~~p~~~~~~~~------~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G 76 (503)
T PRK04813 4 IIETIEEFAQ-TQPDFPAYDYL------GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAG 76 (503)
T ss_pred HHHHHHHHHH-hCCCceEEEeC------CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 5578888888 89999999876 5789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++..+++.++++++++.+...... ..+. .+..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~-~~~~~~~----------- 124 (503)
T PRK04813 77 HAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------------------LGIP-VITLDEL----------- 124 (503)
T ss_pred CEEecCCCCChHHHHHHHHHhcCCCEEEecccccccc--------------------cCCc-EEehHHh-----------
Confidence 9999999999999999999999999999987541100 0000 1111100
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchh
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 441 (778)
.+...............++++++++|||||||.||||.++|++++.. ..+....+++..++++++..|++|.
T Consensus 125 -------~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~ 196 (503)
T PRK04813 125 -------KDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSF-TNWMLEDFALPEGPQFLNQAPYSFD 196 (503)
T ss_pred -------hhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHH-HHHHHHHcCCCcCceeeecCCcchh
Confidence 00000000111122346788999999999999999999999996554 4444556888899999999999998
Q ss_pred hhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCC
Q 004034 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (778)
Q Consensus 442 ~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (778)
.+ .+.++.+|..|+++++++.. ...++..+++.++++++|++..+|++++.+..... ....+++++|.++++|+++
T Consensus 197 ~~-~~~~~~~l~~g~~~v~~~~~-~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~--~~~~~~~~l~~i~~~G~~l 272 (503)
T PRK04813 197 LS-VMDLYPTLASGGTLVALPKD-MTANFKQLFETLPQLPINVWVSTPSFADMCLLDPS--FNEEHLPNLTHFLFCGEEL 272 (503)
T ss_pred Hh-HHHHHHHHhcCCEEEEcChh-hhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhc--cCcccCCCceEEEEecCcC
Confidence 87 56778899999999998753 23488999999999999999999999988765532 2234678999999999999
Q ss_pred CHHHHHHHHHHhCCCCcceecccccccccceecccC-C-C-CCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEe
Q 004034 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-P-G-AWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 598 (778)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~-~-~-~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~ 598 (778)
++.+++++.+.++ ++.+++.||+||++...+... . . .......++|+|.++++++|+|+++.+++.|+.|||+++
T Consensus 273 ~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 350 (503)
T PRK04813 273 PHKTAKKLLERFP--SATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQGEIVIS 350 (503)
T ss_pred CHHHHHHHHHHCC--CceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCceEEEEe
Confidence 9999999999985 478999999999976443211 1 1 112445679999999999999999999999999999999
Q ss_pred cCCCcccccccCChhhhhhhccCC-CCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEE
Q 004034 599 SSWPGAFRTLYGDHERYETTYFKP-FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAA 677 (778)
Q Consensus 599 g~~p~v~~gY~~~~~~~~~~~~~~-~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~ 677 (778)
| +.++.||+++++.+...|+.. ..+||+|||++++ +||++++.||.||+||++|++|+|.|||++|.+||+|.+++
T Consensus 351 ~--~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 427 (503)
T PRK04813 351 G--PSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAV 427 (503)
T ss_pred c--cccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEE
Confidence 9 899999999999888877642 2359999999999 99999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCeEEEEEEEEcCCC-CCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 678 VVGVEHEVKGQGIYAFVTLVEGV-PYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 678 Vv~~~~~~~~~~lva~Vv~~~~~-~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
|++.++...++.++++|++.++. ....++.++++++++++++.+++|..|+++++||+|+|||++|++|++.++
T Consensus 428 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 428 VVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred EEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 99988777778899999987642 222355678999999999999999999999999999999999999999875
No 94
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=9.2e-65 Score=639.77 Aligned_cols=507 Identities=23% Similarity=0.255 Sum_probs=410.3
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++||++|++... ++++||+||+++++++|+.|++ ++++||+|+++++|++|+++++|||+++
T Consensus 616 ~l~~~~~~~a~-~~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~ 688 (1146)
T PRK08633 616 PLAEAWIDTAK-RNWSRLAVADST-----GGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLA 688 (1146)
T ss_pred CHHHHHHHHHH-hcCCCcEEEcCC-----CCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHc
Confidence 46788888888 899999998531 4689999999999999999987 4899999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHH--HHHHhhcCCCccEEEEEccCCccccccc
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAA--LDECAKSGISVDVCLTYENQSAMTRENT 358 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 358 (778)
|++++|++|.++.+++.+++++++++++++++.... .+.+. .... +....++..++...
T Consensus 689 G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~------ 749 (1146)
T PRK08633 689 GKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLE---------KLKNKGFDLEL----PENVKVIYLEDLKA------ 749 (1146)
T ss_pred CCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHH---------HHhccCCchhc----ccCceEEEeehhcc------
Confidence 999999999999999999999999999999765321 11100 0001 11223333332110
Q ss_pred cCCCCcccchhhccCCC--CC----CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEE
Q 004034 359 KWQDGRDIWWQDVVPKY--PT----KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 432 (778)
Q Consensus 359 ~~~~~~~~~~~~~l~~~--~~----~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~ 432 (778)
... ....+.+..... +. ........++|+++|+|||||||.||||+++|++++.+ .......+++.++|++
T Consensus 750 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~-~~~~~~~~~~~~~d~~ 826 (1146)
T PRK08633 750 KIS--KVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSN-IEQISDVFNLRNDDVI 826 (1146)
T ss_pred ccc--hhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHH-HHHHHHhcCCCCCCEE
Confidence 000 000011111000 00 00013456799999999999999999999999996544 4445567888999999
Q ss_pred EEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCcee
Q 004034 433 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 512 (778)
Q Consensus 433 l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr 512 (778)
++.+|+.|..++...++.+++.|+++++.+.. .+++.+++.++++++|++.++|++++.+.+... ....+++++|
T Consensus 827 l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr 901 (1146)
T PRK08633 827 LSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDP---TDALGIAKLVAKHRATILLGTPTFLRLYLRNKK--LHPLMFASLR 901 (1146)
T ss_pred EEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCC---CCHHHHHHHHHHcCCeEEEecHHHHHHHHhccc--cCcccCCCee
Confidence 99999999999877788999999999987532 488999999999999999999999999987543 2345778999
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCC--------CCCCCCCcCcCcCCceEEEECC-C
Q 004034 513 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--------WPQKPGSATFPFFGVQPVIVDE-K 583 (778)
Q Consensus 513 ~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~--------~~~~~~~~G~p~~g~~~~Ivd~-~ 583 (778)
.+++|||++++++.+++.+.++ +++++.||+||++++.+...+.. ...+++++|+|++|++++|+|+ +
T Consensus 902 ~~~~gg~~~~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~ 978 (1146)
T PRK08633 902 LVVAGAEKLKPEVADAFEEKFG---IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPET 978 (1146)
T ss_pred eEEEcCCcCCHHHHHHHHHHhC---CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCC
Confidence 9999999999999999999886 68999999999987655432211 1235678999999999999995 6
Q ss_pred CceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC-CCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHH
Q 004034 584 GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAE 662 (778)
Q Consensus 584 g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~-~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~e 662 (778)
+++++.|+.|||+|+| |.+++||+++++.+.+.+.. +.+|||+|||+|++|+||+++++||.||+||++|++|+|.|
T Consensus 979 ~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~e 1056 (1146)
T PRK08633 979 FEELPPGEDGLILIGG--PQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGA 1056 (1146)
T ss_pred CccCCCCCceEEEEcC--CCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHH
Confidence 8999999999999999 89999999999888776542 23479999999999999999999999999999999999999
Q ss_pred HHHHHhcCC--ccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHh-hcCCCccccEEEECCCCCCCCCC
Q 004034 663 VESALVSHP--QCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRSG 739 (778)
Q Consensus 663 IE~~L~~~p--~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~-~Lp~~~~P~~i~~v~~lP~T~sG 739 (778)
||++|.+|| .+.+++|++++|+..++.++++++... .+ .+++++++++ .+|+|++|..++++++||+|++|
T Consensus 1057 iE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~---~~---~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~G 1130 (1146)
T PRK08633 1057 VEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGA---ED---VEELKRAIKESGLPNLWKPSRYFKVEALPLLGSG 1130 (1146)
T ss_pred HHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCc---cC---HHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCC
Confidence 999999999 567899999999988999999998631 12 4678888875 69999999999999999999999
Q ss_pred cccHHHHHHHHhc
Q 004034 740 KIMRRILRKIASR 752 (778)
Q Consensus 740 Ki~R~~L~~~~~~ 752 (778)
|+||++|+++..+
T Consensus 1131 Ki~r~~L~~~~~~ 1143 (1146)
T PRK08633 1131 KLDLKGLKELALA 1143 (1146)
T ss_pred CCcHHHHHHHHHH
Confidence 9999999998653
No 95
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.8e-65 Score=604.46 Aligned_cols=520 Identities=19% Similarity=0.238 Sum_probs=387.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcC-----------C----------CCcceeecHHHHHHHHHHHHHHHHHcCCCCCCE
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEAN-----------D----------PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDA 259 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~-----------~----------~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~ 259 (778)
+++++|.++++ ++||++|+.+... . .+..+.+||+||.++++++|+.|+++|+++||+
T Consensus 70 t~~~~~~~~~~-~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~ 148 (700)
T PTZ00216 70 NFLQRLERICK-ERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSN 148 (700)
T ss_pred CHHHHHHHHHH-hCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 58899999999 9999999998421 0 023689999999999999999999999999999
Q ss_pred EEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCC
Q 004034 260 VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI 339 (778)
Q Consensus 260 Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (778)
|+|+++|++||++++|||+++|++++|+++.++++++.++|++++++++|++.... ............
T Consensus 149 V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~------------~~l~~~~~~~~~ 216 (700)
T PTZ00216 149 VAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV------------PNLLRLMKSGGM 216 (700)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH------------HHHHHhhhhccC
Confidence 99999999999999999999999999999999999999999999999999975421 111111110001
Q ss_pred CccEEEEEccCCccccccccCCCCcccchhhccCCC----CCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHH
Q 004034 340 SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY----PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH 415 (778)
Q Consensus 340 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~ 415 (778)
....++.++.... ...........|.+.+... ..........++|+++|+|||||||.||||+++|+|++.+
T Consensus 217 ~~~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 217 PNTTIIYLDSLPA----SVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred CceEEEEECCCcc----ccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 1123454443211 0000011123454443322 1111123456899999999999999999999999996554
Q ss_pred HHHHHHHhh----C-CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHH-------HHHHhCcc
Q 004034 416 TATTFKYAF----D-YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWD-------IVDKYKVT 483 (778)
Q Consensus 416 ~~~~~~~~~----~-~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~-------~i~~~~vT 483 (778)
... ....+ + +.++|++++++|++|+++... .+..+..|+++++. ++..+++ .++++++|
T Consensus 293 ~~~-~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~-------~~~~l~~~~~~~~~~l~~~~pT 363 (700)
T PTZ00216 293 ILA-LEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG-------SPRTLTDTFARPHGDLTEFRPV 363 (700)
T ss_pred HHH-HHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC-------CHHHhhhhhccccchHHHcCCc
Confidence 332 22222 2 467899999999999887543 34457778776552 3444444 68899999
Q ss_pred EEEecHHHHHHHHhcCCccc-----------------------c----------------cCCCCceeEEEEecCCCCHH
Q 004034 484 IFYTAPTLVRSLMRDGNEYV-----------------------T----------------RYSRKSLRVLGSVGEPINPS 524 (778)
Q Consensus 484 ~l~~~Ps~l~~L~~~~~~~~-----------------------~----------------~~~l~sLr~v~~gGe~l~~~ 524 (778)
++.++|++++.|.+...... . ....++||.+++||++++++
T Consensus 364 ~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~ 443 (700)
T PTZ00216 364 FLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAA 443 (700)
T ss_pred EEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHH
Confidence 99999999988764311000 0 00015899999999999999
Q ss_pred HHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCc--eeCCCeeeEEEEecCCC
Q 004034 525 AWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGV--EIEGECSGYLCIKSSWP 602 (778)
Q Consensus 525 ~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~--~~~~g~~GEL~v~g~~p 602 (778)
+.+++...++ ++++.||+||+++..+....+ ...++++|+|++|++++|+|+++. ..+++..|||+|+| |
T Consensus 444 ~~~~~~~~~~----~l~~~YG~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG--~ 515 (700)
T PTZ00216 444 TQEFVNVVFG----MVIQGWGLTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRG--P 515 (700)
T ss_pred HHHHHHHHhh----hHhhccCcccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcC--C
Confidence 9988776653 699999999998765443332 245789999999999999997642 34556679999999 8
Q ss_pred cccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEE-eCceeeCHHHHHHHHhcCCccceE--EEE
Q 004034 603 GAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN-VSGHRIGTAEVESALVSHPQCAEA--AVV 679 (778)
Q Consensus 603 ~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Ik-i~G~rI~~~eIE~~L~~~p~V~ea--~Vv 679 (778)
++++|||++++.+.+.|.. +|||+|||+|++|+||+|+|+||+||+|| .+|++|+|.|||++|.+||.|.++ +|+
T Consensus 516 ~v~~GY~~~pe~T~~~f~~--dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~ 593 (700)
T PTZ00216 516 FLFKGYYKQEELTREVLDE--DGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVL 593 (700)
T ss_pred cccchhcCChhHhhhhccc--cCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEE
Confidence 9999999999999888754 68999999999999999999999999999 789999999999999999999974 344
Q ss_pred EEecCCCCeEEEEEEEEcCC----------CC-------CCHHHHHHHHHHHH-----hhcCCCccccEEEECCC-----
Q 004034 680 GVEHEVKGQGIYAFVTLVEG----------VP-------YSEELRKSLVLAVR-----KQIGAFAAPDKIHWAPG----- 732 (778)
Q Consensus 680 ~~~~~~~~~~lva~Vv~~~~----------~~-------~~~~l~~~l~~~l~-----~~Lp~~~~P~~i~~v~~----- 732 (778)
+.+ ....++|+|++... .. .++++.+.+.+.+. +.+..|..++.|+++++
T Consensus 594 ~~~---~~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~ 670 (700)
T PTZ00216 594 VHP---ARSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPE 670 (700)
T ss_pred Eec---CCceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCC
Confidence 332 23678999987531 00 01223333333332 35888999999998753
Q ss_pred -CCCCCCCcccHHHHHHHHhcccCcCCC
Q 004034 733 -LPKTRSGKIMRRILRKIASRQLDELGD 759 (778)
Q Consensus 733 -lP~T~sGKi~R~~L~~~~~~~~~~~~~ 759 (778)
=-+|+++|+.|+.+.+.+..++++++.
T Consensus 671 ~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 698 (700)
T PTZ00216 671 NGVLTAAMKLKRRVIDERYADLIKELFA 698 (700)
T ss_pred CCCCChhhccchHHHHHHHHHHHHHHhc
Confidence 246999999999999999988877653
No 96
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.7e-64 Score=595.01 Aligned_cols=516 Identities=18% Similarity=0.186 Sum_probs=395.3
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++||++|+++.+.. +..+++||+||.++++++|++|.++|+++||+|+|+++|++|+++++|||+++
T Consensus 40 ~l~~~l~~~a~-~~p~~~a~~~~~~~-~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~ 117 (614)
T PRK08180 40 RLTDRLVHWAQ-EAPDRVFLAERGAD-GGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYA 117 (614)
T ss_pred cHHHHHHHHHH-HCCCCceeeeccCC-CceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 47788999998 89999999875211 23578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCC-----HHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccc
Q 004034 281 GAVHSVVFAGFS-----SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 355 (778)
Q Consensus 281 Gav~vpl~p~~~-----~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 355 (778)
|++++|++|.++ .+++.+++++++++++|+++... ....+.... .....++..+...
T Consensus 118 Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~-----------~~~~~~~~~---~~~~~~i~~~~~~---- 179 (614)
T PRK08180 118 GVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA-----------FARALAAVV---PADVEVVAVRGAV---- 179 (614)
T ss_pred CCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH-----------HHHHHhhhc---cCCceEEEecCCC----
Confidence 999999999998 79999999999999999875321 111111110 1111222222110
Q ss_pred ccccCCCCcccchhhccCCCCC---CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCC--CCc
Q 004034 356 ENTKWQDGRDIWWQDVVPKYPT---KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK--PSD 430 (778)
Q Consensus 356 ~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~--~~d 430 (778)
.......|.+.+..... ..+.....++|+++|+|||||||.||||+++|++++.+.. .....+++. .++
T Consensus 180 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~~~~ 253 (614)
T PRK08180 180 -----PGRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQ-MLAQTFPFLAEEPP 253 (614)
T ss_pred -----CCcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHH-HHHhhccccCCCCc
Confidence 00001234433322111 1112234679999999999999999999999999654433 333445543 568
Q ss_pred EEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc--ccccCCC
Q 004034 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE--YVTRYSR 508 (778)
Q Consensus 431 ~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~--~~~~~~l 508 (778)
++++++|++|..++...++.+|..|+++++.++.........+++.++++++|+++++|++++.|++.... .....++
T Consensus 254 ~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~ 333 (614)
T PRK08180 254 VLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFF 333 (614)
T ss_pred EEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhc
Confidence 99999999999987778889999999999976432212345788899999999999999999998864221 1123457
Q ss_pred CceeEEEEecCCCCHHHHHHHHHH----hCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCC
Q 004034 509 KSLRVLGSVGEPINPSAWRWFFNV----VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKG 584 (778)
Q Consensus 509 ~sLr~v~~gGe~l~~~~~~~~~~~----~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g 584 (778)
++||.+++||+++++++++++.+. +|. ++++++.||+||++.+++..... ...++++|+|++|++++|+|+.
T Consensus 334 ~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d~~- 409 (614)
T PRK08180 334 SRLKLLFYAGAALSQDVWDRLDRVAEATCGE-RIRMMTGLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVPVG- 409 (614)
T ss_pred cceeEEEEccCCCCHHHHHHHHHHHHhhcCC-CceeeeeecccccCCceEecccc--cCCCCcccCccCCcEEEEecCC-
Confidence 899999999999999999998875 332 36899999999998655433222 2467899999999999999853
Q ss_pred ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEE----ecCCeEEEEeecCCEEEeC-ceeeC
Q 004034 585 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSR----DKDGYHWLTGRVDDVINVS-GHRIG 659 (778)
Q Consensus 585 ~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~----~~dG~l~~~GR~dd~Iki~-G~rI~ 659 (778)
..|||+|+| |+++.|||++++.+.+.|.. +|||+|||+|++ |+||+|+|+||+||+||++ |++|+
T Consensus 410 ------~~GEi~vrg--~~v~~GY~~~p~~t~~~~~~--dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~ 479 (614)
T PRK08180 410 ------GKLEVRVKG--PNVTPGYWRAPELTAEAFDE--EGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVS 479 (614)
T ss_pred ------CCcEEEEec--CccchhhcCChhHhHhhccc--CCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEec
Confidence 369999999 89999999999988776643 789999999999 5689999999999999974 98776
Q ss_pred --HHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCC---------C--CHH-HHHHHHHHHHhhcCCCc---
Q 004034 660 --TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP---------Y--SEE-LRKSLVLAVRKQIGAFA--- 722 (778)
Q Consensus 660 --~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~---------~--~~~-l~~~l~~~l~~~Lp~~~--- 722 (778)
+.|||.++.+||.|.||+|++.+++ .+.|+|+++++.. . .+. ..++|++++++.|..|.
T Consensus 480 ~~p~Eie~~l~~~p~V~~a~V~g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 555 (614)
T PRK08180 480 VGPLRARAVSAGAPLVQDVVITGHDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQA 555 (614)
T ss_pred chhhhHHHHhhcCchhheEEEEcCCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhc
Confidence 7899999999999999999998764 4779998865410 0 000 12456666666666555
Q ss_pred -----cccEEEECCCCCCCC------CCcccHHHHHHHHhcccCcCCCC
Q 004034 723 -----APDKIHWAPGLPKTR------SGKIMRRILRKIASRQLDELGDT 760 (778)
Q Consensus 723 -----~P~~i~~v~~lP~T~------sGKi~R~~L~~~~~~~~~~~~~~ 760 (778)
+|+++++++++|+|+ +||+.|+++.+.+.++++++++.
T Consensus 556 ~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~lY~~ 604 (614)
T PRK08180 556 TGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEALYAD 604 (614)
T ss_pred cccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHHHhCC
Confidence 899999999999865 55889999999999999888763
No 97
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-63 Score=572.46 Aligned_cols=508 Identities=23% Similarity=0.299 Sum_probs=403.6
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+.++|+++++ ++||++|+++. .+.+||.||+++++++|+.|.+.|+++||+|+|+++|++++++++|||+++|
T Consensus 5 l~~~~~~~a~-~~p~~~a~~~~------~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G 77 (533)
T PRK07798 5 IADLFEAVAD-AVPDRVALVCG------DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKAR 77 (533)
T ss_pred HHHHHHHHHH-hCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 6788999998 89999999986 6899999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|+++.++.+++.+++++++++++++++... ..+.+....+ +....++.++.... ....
T Consensus 78 ~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~ 139 (533)
T PRK07798 78 AVPVNVNYRYVEDELRYLLDDSDAVALVYEREFA---------PRVAEVLPRL----PKLRTLVVVEDGSG-----NDLL 139 (533)
T ss_pred eEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhH---------HHHHHHhccC----CCccEEEEecCCcc-----cccC
Confidence 9999999999999999999999999999976432 2222221111 33444555543221 0000
Q ss_pred CCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHH--------hhCC------C
Q 004034 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY--------AFDY------K 427 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~--------~~~~------~ 427 (778)
...+.|.+.+........... ...+.++|+|||||||.||||+++|++++......... ...+ .
T Consensus 140 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (533)
T PRK07798 140 -PGAVDYEDALAAGSPERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAG 217 (533)
T ss_pred -CccccHHHHHhccCCcCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCC
Confidence 012334444433222222212 23455799999999999999999999965433221111 1111 5
Q ss_pred CCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHH-HHHhcCCcccccC
Q 004034 428 PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVR-SLMRDGNEYVTRY 506 (778)
Q Consensus 428 ~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~-~L~~~~~~~~~~~ 506 (778)
.+++++..+|+.|..++ +.++.+|+.|+++++.+.. .+++..+++.++++++|.+.++|..+. .+..... .....
T Consensus 218 ~~~~~~~~~pl~~~~~~-~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~~~~~ 293 (533)
T PRK07798 218 PGMRRFPAPPLMHGAGQ-WAAFAALFSGQTVVLLPDV--RFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-ARGPY 293 (533)
T ss_pred CCceEEEecchhhhhhH-HHHHHHHhcCceEEEecCC--CcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-ccccC
Confidence 67899999999999985 5788999999999998743 358999999999999999999986553 3333221 11234
Q ss_pred CCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcC--cCcCCceEEEECCCC
Q 004034 507 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSAT--FPFFGVQPVIVDEKG 584 (778)
Q Consensus 507 ~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G--~p~~g~~~~Ivd~~g 584 (778)
+++++|.+++||+++++++.+++.+.++ ++.+++.||+||++.+...... . .....| ++.++..++|+|+++
T Consensus 294 ~~~~l~~i~~gG~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~-~---~~~~~g~~~~~~~~~~~i~~~~~ 367 (533)
T PRK07798 294 DLSSLFAIASGGALFSPSVKEALLELLP--NVVLTDSIGSSETGFGGSGTVA-K---GAVHTGGPRFTIGPRTVVLDEDG 367 (533)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHcC--CCeEEeeecccccccccccCCC-C---CCccCCCCccCCCceEEEECCCC
Confidence 6789999999999999999999999885 4789999999999754442211 1 112233 788999999999999
Q ss_pred ceeCCCee--eEEEEecCCCcccccccCChhhhhhhccC-CCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHH
Q 004034 585 VEIEGECS--GYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTA 661 (778)
Q Consensus 585 ~~~~~g~~--GEL~v~g~~p~v~~gY~~~~~~~~~~~~~-~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~ 661 (778)
++++.|+. |+|+. + +.++.||+++++.+...|.. +..+||+|||++++|+||+++++||.||+||++|++|+|.
T Consensus 368 ~~~~~g~~~~g~l~~-~--~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~ 444 (533)
T PRK07798 368 NPVEPGSGEIGWIAR-R--GHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPE 444 (533)
T ss_pred CCCCCCCCCeeEEEe-e--cCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHH
Confidence 99999877 77765 4 47899999999888777643 2345999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcc
Q 004034 662 EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKI 741 (778)
Q Consensus 662 eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi 741 (778)
|||++|.++|.|.+++|++++++..++.++++|+++++...+ .++|+++++++|+.|++|..++++++||+|++||+
T Consensus 445 eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~ 521 (533)
T PRK07798 445 EVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGARPD---LAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKA 521 (533)
T ss_pred HHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCCCC---HHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchh
Confidence 999999999999999999998887788999999988665433 57899999999999999999999999999999999
Q ss_pred cHHHHHHHHhc
Q 004034 742 MRRILRKIASR 752 (778)
Q Consensus 742 ~R~~L~~~~~~ 752 (778)
+|+.|+++.++
T Consensus 522 ~~~~~~~~~~~ 532 (533)
T PRK07798 522 DYRWAKEQAAE 532 (533)
T ss_pred hHHHHhhhhcc
Confidence 99999998864
No 98
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-63 Score=608.76 Aligned_cols=528 Identities=19% Similarity=0.197 Sum_probs=394.6
Q ss_pred HHHHHHHhhCHHHHHHHHHhh----cccccccCcccccccccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEE
Q 004034 146 LEMYKRSVEDPAGFWADIASE----FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIY 221 (778)
Q Consensus 146 ~~ll~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~ 221 (778)
.+-+..++.+|++...+++.+ +.-...+++ + . ....+ ++.++|+++++ ++||++|++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~---------~~~~~-sl~~ll~~~a~-~~pd~~Al~ 467 (994)
T PRK07868 407 ARGAADAAVAANRSVRTLAVETARTLPRLARLGQ-I-------N---------DHTRI-SLGRIIAEQAR-DAPKGEFLL 467 (994)
T ss_pred hhhHHHHHHHhhhhhHHHHHHHHHhhhhHHHhhh-c-------C---------CCCCc-cHHHHHHHHHH-HCCCCeEEE
Confidence 344567778899999888531 111112221 0 0 00111 47889999998 899999999
Q ss_pred EEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHH
Q 004034 222 WEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIM 301 (778)
Q Consensus 222 ~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~ 301 (778)
+. ++++||+||+++++++|+.|+++|+++||+|+|+++|++++++++|||+++|++++|++|. +++.++++
T Consensus 468 ~~------~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~ 538 (994)
T PRK07868 468 FD------GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVR 538 (994)
T ss_pred eC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHh
Confidence 86 5789999999999999999999999999999999999999999999999999999999985 68999999
Q ss_pred hcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCC-CcccchhhccCCC---CC
Q 004034 302 DCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQD-GRDIWWQDVVPKY---PT 377 (778)
Q Consensus 302 ~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~---~~ 377 (778)
++++++||+++... ... ..+ ...+++++..... ...... .....+.+..... +.
T Consensus 539 ~s~~~~li~~~~~~------------~~~-~~~------~~~iiv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (994)
T PRK07868 539 LGGVTEIITDPTNL------------EAA-RQL------PGRVLVLGGGESR---DLDLPDDADVIDMEKIDPDAVELPG 596 (994)
T ss_pred ccCCeEEEEChHHH------------HHH-Hhc------CceEEEecCCccc---cccCCcchhhhhhhhcCcccccCCc
Confidence 99999999975432 111 111 1234444321100 000000 0011111111100 00
Q ss_pred CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcE
Q 004034 378 KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGAS 457 (778)
Q Consensus 378 ~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~t 457 (778)
..+.....++|++||+|| ||||.||++.++|.++.... ......+++.++|++++.+|++|+.++...++.++..|++
T Consensus 597 ~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~-~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~ 674 (994)
T PRK07868 597 WYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSA-FGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR 674 (994)
T ss_pred ccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHH-HhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE
Confidence 011122246899999999 57777777777777654433 2334467888999999999999999865555555555555
Q ss_pred EEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCC
Q 004034 458 VVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSR 537 (778)
Q Consensus 458 lvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~ 537 (778)
+++.+. ++++.+++.|++++||+++++|++++.|++... ....++++||.++ |+.+++++++++.+.++ .
T Consensus 675 vvl~~~----~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~--~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~--~ 744 (994)
T PRK07868 675 IALSRG----LDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPA--FVLHGNHPVRLFI--GSGMPTGLWERVVEAFA--P 744 (994)
T ss_pred EEecCC----CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcC--CccCCCCceEEEe--cCCCCHHHHHHHHHHhC--c
Confidence 555432 589999999999999999999999999987643 2234677899876 44599999999999987 3
Q ss_pred cceecccccccccceecccCCCCCCCCCCCcCcCcCCc-eEEEE-----------CCCC--ceeCCCeeeEEEEecCCCc
Q 004034 538 CPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGV-QPVIV-----------DEKG--VEIEGECSGYLCIKSSWPG 603 (778)
Q Consensus 538 ~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~-~~~Iv-----------d~~g--~~~~~g~~GEL~v~g~~p~ 603 (778)
+++++.||+||++.+.. ... ..+++++|+|++|+ +++|. |++| ++++.|+.|||++++ +.
T Consensus 745 ~~l~~~YG~TE~~~~~~-~~~---~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~--~~ 818 (994)
T PRK07868 745 AHVVEFFATTDGQAVLA-NVS---GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARA--RG 818 (994)
T ss_pred hheeeeeeccccccccc-ccC---CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEec--CC
Confidence 78999999999875433 221 23568999999997 55543 5566 678899999999999 43
Q ss_pred ccccccCChhhhh-hhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEe
Q 004034 604 AFRTLYGDHERYE-TTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVE 682 (778)
Q Consensus 604 v~~gY~~~~~~~~-~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~ 682 (778)
|+ +++.+. ..+|.+.+|||+|||+|++|+||+|+|+||.||+||++|.+|+|.|||++|.+||+|.+|+|++++
T Consensus 819 ----~~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~ 893 (994)
T PRK07868 819 ----PI-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVE 893 (994)
T ss_pred ----CC-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeec
Confidence 23 344322 223443478999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHh
Q 004034 683 HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 683 ~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 751 (778)
++. ++.++|||+++++...+ .++|++++++ +|.||+|+.|+++++||+|+||||+|++|++...
T Consensus 894 d~~-~~~~~a~Vv~~~~~~~~---~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 894 VGG-RQLAVAAVTLRPGAAIT---AADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred CCC-CceEEEEEEeCCCCcCC---HHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCC
Confidence 875 67899999988765444 5689999986 9999999999999999999999999999987643
No 99
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-63 Score=569.65 Aligned_cols=483 Identities=26% Similarity=0.350 Sum_probs=397.3
Q ss_pred ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEE
Q 004034 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 309 (778)
Q Consensus 230 ~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~ii 309 (778)
++.+||+||.++++++|++|+++|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++++++++++
T Consensus 9 ~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 9 GEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred CcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCcccCCcccchHHHHHHHHHHHhhcCC-CccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCC
Q 004034 310 TSNAVKRGPKAIHLKDIVDAALDECAKSGI-SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAED 388 (778)
Q Consensus 310 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d 388 (778)
+++... ..+.+..+.. . .++.+++.+... .....|.+....... ......++
T Consensus 89 ~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~~~ 141 (502)
T PRK08276 89 VSAALA---------DTAAELAAEL----PAGVPLLLVVAGPV-----------PGFRSYEEALAAQPD---TPIADETA 141 (502)
T ss_pred Eccchh---------hHHHHHhhhc----cccccEEEEeCCCC-----------CccccHHHHHhcCCC---CCCCCCCc
Confidence 986542 1122221211 1 334444332110 011123322222111 11234577
Q ss_pred cEEEEeCCCCCCCCceEEEccchHHHHHH-----HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcC
Q 004034 389 PLFLLYTSGSTGKPKGVLHTTGGYMVHTA-----TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (778)
Q Consensus 389 ~a~Il~TSGSTG~PKgV~~th~~~l~~~~-----~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~ 463 (778)
+++|+|||||||.||||+++|.++..... ......+....++++++..|++|..++.+ .+.++..|+++++.+.
T Consensus 142 ~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~ 220 (502)
T PRK08276 142 GADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEK 220 (502)
T ss_pred ceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCC
Confidence 89999999999999999999887543221 11111222346789999999999887544 4578999999988754
Q ss_pred CCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecc
Q 004034 464 APTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDT 543 (778)
Q Consensus 464 ~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~ 543 (778)
+++..+++.++++++|++.++|++++.+++.........+++++|.++++||+++.++++++.+.++ .++++.
T Consensus 221 ----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~---~~~~~~ 293 (502)
T PRK08276 221 ----FDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG---PIIHEY 293 (502)
T ss_pred ----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC---cHhhhh
Confidence 4899999999999999999999999999887654344567899999999999999999999999886 579999
Q ss_pred cccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCC
Q 004034 544 WWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 623 (778)
Q Consensus 544 YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~ 623 (778)
||+||++.+++..... ....++++|+|+ ++.++|+|+++++++.|+.|||+++| +.++.||+++++.+...+..
T Consensus 294 yG~tE~~~~~~~~~~~-~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~-- 367 (502)
T PRK08276 294 YASSEGGGVTVITSED-WLAHPGSVGKAV-LGEVRILDEDGNELPPGEIGTVYFEM--DGYPFEYHNDPEKTAAARNP-- 367 (502)
T ss_pred cccccccceeEecCcc-ccccCCCcceec-ccEEEEECCCCCCCcCCCceEEEEEC--CCccchhcCCHHHHHHHhcC--
Confidence 9999999755543321 234567899999 88999999999999999999999999 78899999999888887764
Q ss_pred CCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCC
Q 004034 624 PGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS 703 (778)
Q Consensus 624 ~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~ 703 (778)
+|||+|||++++++||.+++.||.||++|++|++|++.|||.+|.+||+|.+++|+++.++..++.++++|+++++...+
T Consensus 368 ~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 447 (502)
T PRK08276 368 HGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAG 447 (502)
T ss_pred CCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCC
Confidence 48999999999999999999999999999999999999999999999999999999999888889999999998765555
Q ss_pred HHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 704 EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 704 ~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
+++.++++++++++|+.+++|..++++++||+|++||++|+.|++.+...
T Consensus 448 ~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 448 DALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEG 497 (502)
T ss_pred hhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhh
Confidence 55667899999999999999999999999999999999999999997643
No 100
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=5.8e-63 Score=577.05 Aligned_cols=518 Identities=20% Similarity=0.266 Sum_probs=399.2
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
.+..|+++++ .+|+++|+++. .+++||+||+++++++|..|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 22 ~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G 94 (567)
T PLN02479 22 PLWFLERAAV-VHPTRKSVVHG------SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAG 94 (567)
T ss_pred HHHHHHHHHh-hCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCC
Confidence 5677888888 89999999875 5789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhc---CCCccEEEEEccCCccccccc
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKS---GISVDVCLTYENQSAMTRENT 358 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~vi~~~~~~~~~~~~~ 358 (778)
++++|++|.++.+++.+++++++++++|+++... +...++...+... ......++.+...........
T Consensus 95 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (567)
T PLN02479 95 AVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFF---------TLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQ 165 (567)
T ss_pred cEEEEeccccCHHHHHHHHhhcCceEEEEchhhh---------hHHHHHHHHHhhcccccCCCceEEEecCCcCCccccc
Confidence 9999999999999999999999999999987542 1122222221100 011123333332110000000
Q ss_pred cCCCCcccchhhccCCCCCCCC-ccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCC
Q 004034 359 KWQDGRDIWWQDVVPKYPTKCE-VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTAD 437 (778)
Q Consensus 359 ~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 437 (778)
.....+...|.+.+........ ......+++++|+|||||||.||||+++|++++... ......+++.+++++++.+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~-~~~~~~~~~~~~~~~~~~~p 244 (567)
T PLN02479 166 YALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMA-LSNALIWGMNEGAVYLWTLP 244 (567)
T ss_pred cccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHH-HHHHhhcCCCCCCEEEEecc
Confidence 0001123345444433211111 112234578889999999999999999999954433 23334677888999999999
Q ss_pred cchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEe
Q 004034 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 517 (778)
Q Consensus 438 ~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~g 517 (778)
++|..+....++.+++.|.++++. . +++..+++.++++++|++..+|++++.|.+.... ....++++++.++++
T Consensus 245 ~~h~~~~~~~~~~~~~~g~~~~~~-~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~~~l~~~~~~ 318 (567)
T PLN02479 245 MFHCNGWCFTWTLAALCGTNICLR-Q----VTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKS-ETILPLPRVVHVMTA 318 (567)
T ss_pred hhhhhhHHHHHHHHhhcCceEecc-C----CCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhh-cccccccceeEEEEc
Confidence 999988655544456666665543 2 5899999999999999999999999999876431 111256899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCCcceecccccccccceecccC-CC-------C-CCCCCCCcCcCcCCce-EEEEC-CCCce
Q 004034 518 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PG-------A-WPQKPGSATFPFFGVQ-PVIVD-EKGVE 586 (778)
Q Consensus 518 Ge~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~-~~-------~-~~~~~~~~G~p~~g~~-~~Ivd-~~g~~ 586 (778)
|+++++.+++++.+. + .++++.||+||+++..+... .. . ........|.+.+++. ++|+| +++++
T Consensus 319 G~~~~~~~~~~~~~~-~---~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~ 394 (567)
T PLN02479 319 GAAPPPSVLFAMSEK-G---FRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKP 394 (567)
T ss_pred CCCCCHHHHHHHHhc-C---CceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcc
Confidence 999999999988764 4 68999999999865332111 00 0 0011235688888876 88998 46888
Q ss_pred eCCC--eeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHH
Q 004034 587 IEGE--CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVE 664 (778)
Q Consensus 587 ~~~g--~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE 664 (778)
++.+ +.|||+++| +++++|||++++.+.+.|. +|||+|||++++|++|+++|+||.||+||++|++|+|.|||
T Consensus 395 ~~~~g~~~GEl~v~g--~~~~~GY~~~~~~t~~~~~---~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE 469 (567)
T PLN02479 395 VPADGKTMGEIVMRG--NMVMKGYLKNPKANEEAFA---NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVE 469 (567)
T ss_pred cCCCCCCceEEEEec--cchhhhhhcCcccccchhc---CCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHH
Confidence 8753 689999999 8999999999998888764 68999999999999999999999999999999999999999
Q ss_pred HHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCC--HHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCccc
Q 004034 665 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS--EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 742 (778)
Q Consensus 665 ~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~--~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~ 742 (778)
.+|.+||.|.+++|++.+++..++.++++|++..+...+ ....++|+++++++||+|++|+.+++ ++||+|++||++
T Consensus 470 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~ 548 (567)
T PLN02479 470 NVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQ 548 (567)
T ss_pred HHHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCee
Confidence 999999999999999998877788999999987654221 23467899999999999999998877 679999999999
Q ss_pred HHHHHHHHhc
Q 004034 743 RRILRKIASR 752 (778)
Q Consensus 743 R~~L~~~~~~ 752 (778)
|+.|++.+..
T Consensus 549 r~~L~~~~~~ 558 (567)
T PLN02479 549 KHVLRAKAKE 558 (567)
T ss_pred HHHHHHHHHh
Confidence 9999988664
No 101
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.9e-63 Score=563.87 Aligned_cols=430 Identities=19% Similarity=0.212 Sum_probs=355.7
Q ss_pred eecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEE
Q 004034 232 TLTYSQLLQQVCQLANYLKDIGV-KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVIT 310 (778)
Q Consensus 232 ~lTY~eL~~~v~~lA~~L~~~Gv-~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit 310 (778)
-+.|+||.++++++|+.|++.|+ ++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47899999999999999999998 57999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcE
Q 004034 311 SNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPL 390 (778)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a 390 (778)
++..... . ... .. . ......+++++
T Consensus 99 ~~~~~~~-----------------------~-----~~~----------------------~~--~---~~~~~~~~~~~ 123 (452)
T PRK07445 99 LDQLKLS-----------------------H-----PPP----------------------LP--S---QGILPNLETGW 123 (452)
T ss_pred cCccccc-----------------------c-----CCC----------------------CC--c---cccCCCCCCcE
Confidence 6542100 0 000 00 0 00113568999
Q ss_pred EEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCCh
Q 004034 391 FLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDS 470 (778)
Q Consensus 391 ~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~ 470 (778)
+++|||||||.||||+++|++++.. .......+++.+ ++.++.+|++|.+|+ ..++.+|+.|+++++.+.. ..
T Consensus 124 ~i~~TSGTTG~PKgV~~t~~~l~~~-~~~~~~~~~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~----~~ 196 (452)
T PRK07445 124 IMIPTGGSSGQIRFAIHTWETLTAS-VQGFQRYFQLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYK----RL 196 (452)
T ss_pred EEEeCCCCCCCCcEEEechHHHHHH-HHHHHHHhcCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChH----hc
Confidence 9999999999999999999995443 333444556654 467889999999885 5678899999999997531 11
Q ss_pred hHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceeccccccccc
Q 004034 471 GRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETG 550 (778)
Q Consensus 471 ~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g 550 (778)
........++++|++.++|++++.|++.. ...+++||.+++||+++++++.+.+.+ ++ +++++.||+||++
T Consensus 197 ~~~~~~~~~~~~t~~~~vP~~l~~l~~~~-----~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~---~~l~~~YG~TE~~ 267 (452)
T PRK07445 197 KSGQELPPNPSDFFLSLVPTQLQRLLQLR-----PQWLAQFRTILLGGAPAWPSLLEQARQ-LQ---LRLAPTYGMTETA 267 (452)
T ss_pred cchhhhhhhcCceEEEehHHHHHHHHhhC-----hhhhhcceEEEECCccCCHHHHHHHHh-cC---CeEecCcchhhhc
Confidence 22233445789999999999999998732 124789999999999999999988765 34 7899999999998
Q ss_pred ceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcC
Q 004034 551 GFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTG 630 (778)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTG 630 (778)
..++...+......++++|+|+++++++|+ .|+.|||+|+| |.+++||++++. ..+|||+||
T Consensus 268 ~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~--------~g~~Gel~v~g--~~~~~gY~~~~~--------~~~g~~~TG 329 (452)
T PRK07445 268 SQIATLKPDDFLAGNNSSGQVLPHAQITIP--------ANQTGNITIQA--QSLALGYYPQIL--------DSQGIFETD 329 (452)
T ss_pred ccccccCchhhccCCCcCCccCCCCeEEEc--------CCCcceEEEeC--CccchhhcCCcc--------CCCCEEECC
Confidence 654433222212345789999999999997 35689999999 899999998642 136899999
Q ss_pred cEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHH
Q 004034 631 DGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSL 710 (778)
Q Consensus 631 Dl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l 710 (778)
|++++|+||+++|.||.||+||++|++|+|.|||++|.+||+|.+|+|++++++..|+.++|+|+.+++. .+ .++|
T Consensus 330 Dl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~-~~---~~~l 405 (452)
T PRK07445 330 DLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPS-IS---LEEL 405 (452)
T ss_pred CEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCC-CC---HHHH
Confidence 9999999999999999999999999999999999999999999999999999988889999999987653 22 5789
Q ss_pred HHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhccc
Q 004034 711 VLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 754 (778)
Q Consensus 711 ~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~ 754 (778)
+++++++|+.|++|+.++++++||+|++||++|++|++++.+++
T Consensus 406 ~~~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 449 (452)
T PRK07445 406 KTAIKDQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRL 449 (452)
T ss_pred HHHHHHhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999987654
No 102
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6.3e-63 Score=621.59 Aligned_cols=499 Identities=20% Similarity=0.237 Sum_probs=395.9
Q ss_pred HHHHHHHhhhccCC-CeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 202 CYNCLDRNIEAGLG-DKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 202 ~~~~l~~~~~~~~p-d~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
+.+.|+++++ ++| +++|+.+.+ ++++||+||+++++++|+.|++ |+++||+|+++++|++++++++|||+++
T Consensus 633 ~~~~l~~~~~-~~~~~~~ai~~~~-----~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~ 705 (1140)
T PRK06814 633 LFEALIEAAK-IHGFKKLAVEDPV-----NGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSA 705 (1140)
T ss_pred HHHHHHHHHH-HcCCCCeEeECCC-----CCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHC
Confidence 5667777777 565 667776421 5789999999999999999975 9999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++++|+||.++.+++.+++++++++++|+++......+ ..+..+.+ .....++.+++... ...
T Consensus 706 G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~-------~~~~~~~~----~~~~~~i~~~~~~~----~~~- 769 (1140)
T PRK06814 706 GRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKAR-------LGPLIEAL----EFGIRIIYLEDVRA----QIG- 769 (1140)
T ss_pred CCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhc-------chhHHHHh----ccCceEEEehHhhc----cCC-
Confidence 999999999999999999999999999999865421100 01111111 11223444433210 000
Q ss_pred CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
....+.+......+..+.....++|+++|+|||||||.||||+++|++++ .........+++.++|++++.+|++|
T Consensus 770 ---~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~-~~~~~~~~~~~~~~~d~~l~~~pl~h 845 (1140)
T PRK06814 770 ---LADKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLL-ANRAQVAARIDFSPEDKVFNALPVFH 845 (1140)
T ss_pred ---hHHHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHH-HHHHHHHHhhCCCCcCEEEEecchHH
Confidence 00001111111111111113578999999999999999999999999954 44445556788999999999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
..++...++.++..|+++++.+.. .+...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|||+
T Consensus 846 ~~g~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~----~~~~~~~lr~v~~gg~~ 918 (1140)
T PRK06814 846 SFGLTGGLVLPLLSGVKVFLYPSP---LHYRIIPELIYDTNATILFGTDTFLNGYARYA----HPYDFRSLRYVFAGAEK 918 (1140)
T ss_pred HHHHHHHHHHHHHcCCEEEEecCc---ccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc----ccccccceeEEEEcCCc
Confidence 998778888999999999998642 35677889999999999999999999987753 23467899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecC
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~ 600 (778)
+++++.+++.+.++ +++++.||+||++.......+. ..+++++|+|++++++++.+..+ .|+.|||+++|
T Consensus 919 l~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~~~~----~~~~Gel~v~g- 988 (1140)
T PRK06814 919 VKEETRQTWMEKFG---IRILEGYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEPVPG----IDEGGRLFVRG- 988 (1140)
T ss_pred CCHHHHHHHHHHhC---CcEEeccccccccceEEecCCC--CCCCCcCCccCCCCeEEEeecCC----CCCceEEEEeC-
Confidence 99999999999886 6899999999998765543321 23567899999999999987543 35789999999
Q ss_pred CCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEE
Q 004034 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVG 680 (778)
Q Consensus 601 ~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 680 (778)
|++++||+++++.... ....+|||+|||++++|+||+++++||.||+||++|+||+|.|||++|.+||.|.|++|++
T Consensus 989 -~~~~~gY~~~~~~~~~--~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~ 1065 (1140)
T PRK06814 989 -PNVMLGYLRAENPGVL--EPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVS 1065 (1140)
T ss_pred -CCcchhhcCCCCCCcc--ccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEE
Confidence 8999999997643221 1124789999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhh-cCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 681 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 681 ~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
++++..++.+++++... +.+ .+++++++++. +++|++|..|+++++||+|++||+||++|+++..+.
T Consensus 1066 ~~~~~~g~~~~~~~~~~---~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 1133 (1140)
T PRK06814 1066 IPDARKGERIILLTTAS---DAT---RAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEA 1133 (1140)
T ss_pred cccCCCCceEEEEEcCC---CcC---HHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 99988888888776421 222 46788888864 999999999999999999999999999999988754
No 103
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.5e-62 Score=567.70 Aligned_cols=514 Identities=21% Similarity=0.298 Sum_probs=406.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCChHHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLK-DIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~-~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~ 279 (778)
.+.++|+++++ ++|+++|++.. ++++||.||.++++++|.+|+ ++|+++||+|+|+++|++++++++|||++
T Consensus 24 ~l~~~l~~~a~-~~p~~~a~~~~------~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 96 (560)
T PRK08974 24 SLVDMFEQAVA-RYADQPAFINM------GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILR 96 (560)
T ss_pred cHHHHHHHHHH-hCCCCceEEEC------CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 47789999998 89999999875 579999999999999999998 48999999999999999999999999999
Q ss_pred hCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccccc--
Q 004034 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN-- 357 (778)
Q Consensus 280 ~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-- 357 (778)
+|++++|++|.++.+++.+++++++++++++.+... ..+.+.... .....++............
T Consensus 97 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 162 (560)
T PRK08974 97 AGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFA---------HTLEKVVFK-----TPVKHVILTRMGDQLSTAKGT 162 (560)
T ss_pred cCcEEeccCccCCHHHHHHHHHhcCceEEEEecccc---------HHHHHHhhh-----cCcceEEEecccccccccccc
Confidence 999999999999999999999999999999976532 112221111 1122222111000000000
Q ss_pred -------------ccCCCCcccchhhccCCCC-CCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHh
Q 004034 358 -------------TKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 423 (778)
Q Consensus 358 -------------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~ 423 (778)
..........+.+...... .........++++++|+|||||||.||||+++|++++.+........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~ 242 (560)
T PRK08974 163 LVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAY 242 (560)
T ss_pred cccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhh
Confidence 0000000001111111110 01111234678999999999999999999999999654433222211
Q ss_pred h--CCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc
Q 004034 424 F--DYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 501 (778)
Q Consensus 424 ~--~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~ 501 (778)
. ....+++++..+|+.|.++.....+.++..|+++++.... .++..+++.++++++|++..+|++++.|+....
T Consensus 243 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~- 318 (560)
T PRK08974 243 GPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNP---RDIPGFVKELKKYPFTAITGVNTLFNALLNNEE- 318 (560)
T ss_pred ccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCc---cCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcC-
Confidence 1 1234567888899999888666667788899998876432 378889999999999999999999999987643
Q ss_pred ccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEEC
Q 004034 502 YVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD 581 (778)
Q Consensus 502 ~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd 581 (778)
....+++++|.+++||+++++.++++|.+.+| +++++.||+||++.+.+...... ...++++|.|+++++++|+|
T Consensus 319 -~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~~ 393 (560)
T PRK08974 319 -FQELDFSSLKLSVGGGMAVQQAVAERWVKLTG---QYLLEGYGLTECSPLVSVNPYDL-DYYSGSIGLPVPSTEIKLVD 393 (560)
T ss_pred -cccCCccceeEEEecCccCCHHHHHHHHHHhC---CcEEeeecccccCceeeccCCCC-cccCCccccCcCCCEEEEEC
Confidence 23346789999999999999999999998876 78999999999987655433221 23467899999999999999
Q ss_pred CCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHH
Q 004034 582 EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTA 661 (778)
Q Consensus 582 ~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~ 661 (778)
+++++++.|+.|||+|+| +.+++||+++++.+...+ . +|||+|||+++++++|+++++||.||+|+++|++|+|.
T Consensus 394 ~~~~~~~~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~-~--~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~ 468 (560)
T PRK08974 394 DDGNEVPPGEPGELWVKG--PQVMLGYWQRPEATDEVI-K--DGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPN 468 (560)
T ss_pred CCCCCCCCCCceEEEEec--CCcchhhcCChhhhhhhh-h--cCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHH
Confidence 999999999999999999 899999999998777655 3 68999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcc
Q 004034 662 EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKI 741 (778)
Q Consensus 662 eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi 741 (778)
+||++|.+||+|.+++|++.+++..++.++++|+..+.. .+ .++++++++++|+.|++|..++++++||+|++||+
T Consensus 469 ~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~-~~---~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~ 544 (560)
T PRK08974 469 EIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPS-LT---EEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKI 544 (560)
T ss_pred HHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCC-CC---HHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcE
Confidence 999999999999999999999988888888888765432 22 46789999999999999999999999999999999
Q ss_pred cHHHHHHHHhcc
Q 004034 742 MRRILRKIASRQ 753 (778)
Q Consensus 742 ~R~~L~~~~~~~ 753 (778)
+|+.|++....+
T Consensus 545 ~r~~l~~~~~~~ 556 (560)
T PRK08974 545 LRRELRDEARAK 556 (560)
T ss_pred eHHHHHHHHHhh
Confidence 999999987654
No 104
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-63 Score=586.58 Aligned_cols=524 Identities=19% Similarity=0.201 Sum_probs=390.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
++.++|+++++ ++||++|+++.+...+..+++||+||.++++++|++|+++|+++||+|+|+++|++++++++|||+++
T Consensus 50 ~l~~~l~~~a~-~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~ 128 (624)
T PRK12582 50 SIPHLLAKWAA-EAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQA 128 (624)
T ss_pred CHHHHHHHHHH-HCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 57889999998 89999999875321233579999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCH-----HHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccc
Q 004034 281 GAVHSVVFAGFSS-----DSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 355 (778)
Q Consensus 281 Gav~vpl~p~~~~-----~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 355 (778)
|++++|++|.++. +++.+++++++++++|+++... ....+..+.. ..++ ++.++....
T Consensus 129 G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----------~~~~~~~~~~--~~~~-~i~~~~~~~--- 191 (624)
T PRK12582 129 GVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP-----------FARALAALDL--LDVT-VVHVTGPGE--- 191 (624)
T ss_pred CCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH-----------HHHHHHhhhh--cCce-EEEEcCCCc---
Confidence 9999999999885 8999999999999999876421 1111111110 1122 333322110
Q ss_pred ccccCCCCcccchhhccCCCCCC---CCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCC---C
Q 004034 356 ENTKWQDGRDIWWQDVVPKYPTK---CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKP---S 429 (778)
Q Consensus 356 ~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~---~ 429 (778)
......+.+........ .......++++++|+|||||||.||||+++|++++.+... ....+.... .
T Consensus 192 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~~~~ 264 (624)
T PRK12582 192 ------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAM-QEQLRPREPDPPP 264 (624)
T ss_pred ------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHH-HHHhccccCCCCC
Confidence 00112233322211110 1112346789999999999999999999999996554333 333344443 5
Q ss_pred cEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc--ccccCC
Q 004034 430 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE--YVTRYS 507 (778)
Q Consensus 430 d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~--~~~~~~ 507 (778)
++++.++|++|.+++...++.+|..|+++++.++.........+++.++++++|+++++|++++.|++.... .....+
T Consensus 265 ~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~ 344 (624)
T PRK12582 265 PVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSF 344 (624)
T ss_pred ceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHH
Confidence 799999999999987777888999999999875421111224567778899999999999999988764221 112235
Q ss_pred CCceeEEEEecCCCCHHHHHHHHHHh----CCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCC
Q 004034 508 RKSLRVLGSVGEPINPSAWRWFFNVV----GDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEK 583 (778)
Q Consensus 508 l~sLr~v~~gGe~l~~~~~~~~~~~~----g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~ 583 (778)
+++||.+++||+++++++.+++.+.+ |. ++++++.||+||++.++...... ..+++++|+|++|++++|+
T Consensus 345 ~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~--- 418 (624)
T PRK12582 345 FKNLRLMAYGGATLSDDLYERMQALAVRTTGH-RIPFYTGYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLA--- 418 (624)
T ss_pred hhheeEEEecCCCCCHHHHHHHHHHHHhhcCC-CceEEeccccccccceeecccCC--CCCCCCCCcCCCCcEEEEc---
Confidence 68999999999999999999998863 32 36799999999998765422211 2457899999999999985
Q ss_pred CceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEE-e---cCCeEEEEeecCCEEEeC-ceee
Q 004034 584 GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSR-D---KDGYHWLTGRVDDVINVS-GHRI 658 (778)
Q Consensus 584 g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~-~---~dG~l~~~GR~dd~Iki~-G~rI 658 (778)
+.|+.|||+|+| |+++.|||++++.+.+.|.. +|||+|||+|++ | +||+|+|+||+||+||++ |++|
T Consensus 419 ----~~G~~GEl~vrg--~~v~~GY~~~p~~t~~~f~~--dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i 490 (624)
T PRK12582 419 ----PVGDKYEVRVKG--PNVTPGYHKDPELTAAAFDE--EGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWV 490 (624)
T ss_pred ----cCCCceEEEEEC--CcccccccCCccchhhhcCc--cCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEe
Confidence 456789999999 89999999999988776643 789999999998 4 569999999999999975 9999
Q ss_pred CHHHHH--HHHhcCCccceEEEEEEecCCCCeEEEEEEEEcC----------CCC-----CCHHHHHHHHHHH---Hhhc
Q 004034 659 GTAEVE--SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE----------GVP-----YSEELRKSLVLAV---RKQI 718 (778)
Q Consensus 659 ~~~eIE--~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~----------~~~-----~~~~l~~~l~~~l---~~~L 718 (778)
+|.+|| .++.+||.|.||+|++++++. +.+.|++.. +.. ..+++.+.++..| ++.+
T Consensus 491 ~p~~iE~e~~l~~~p~V~~a~VvG~~~~~----~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 566 (624)
T PRK12582 491 SVGTLRPDAVAACSPVIHDAVVAGQDRAF----IGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEA 566 (624)
T ss_pred chHHHHHHHHHhcCcchheEEEEcCCCCc----EEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhc
Confidence 998885 688999999999999987664 344444321 110 1123333333332 3346
Q ss_pred CCCc-cccEEEECCCCCC------CCCCcccHHHHHHHHhcccCcCCCCCCCCChhhH
Q 004034 719 GAFA-APDKIHWAPGLPK------TRSGKIMRRILRKIASRQLDELGDTSTLADPGVV 769 (778)
Q Consensus 719 p~~~-~P~~i~~v~~lP~------T~sGKi~R~~L~~~~~~~~~~~~~~~~~~~~~~~ 769 (778)
+.+. .|+++++++++|+ |++||+.|+++.+.+..+++++++. ...|+++
T Consensus 567 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ly~~--~~~~~~~ 622 (624)
T PRK12582 567 GGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVERLYAE--PPGPDVI 622 (624)
T ss_pred CCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHHHhcC--CCCCCcc
Confidence 6666 9999999998875 5677889999999999999998854 4666664
No 105
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-62 Score=573.81 Aligned_cols=504 Identities=20% Similarity=0.224 Sum_probs=389.7
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
.+.++|+..++ .+|+.+++ .. +.+..+.+||.||+++++++|.+|+++|+++||+|+|+++|++++++++|||+++
T Consensus 22 ~~~~~~~~~~~-~~~~~~~~-~~--~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~ 97 (579)
T PRK09192 22 TLVEALDYAAL-GEAGMNFY-DR--RGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYA 97 (579)
T ss_pred hHHHHHHHhhc-cCCceEEE-ec--CCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHc
Confidence 68899998887 67755543 22 1122478999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCC-------HHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcc
Q 004034 281 GAVHSVVFAGFS-------SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAM 353 (778)
Q Consensus 281 Gav~vpl~p~~~-------~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 353 (778)
|++++|+++.++ .+++.++++.+++++||+++... ..+.+.... .....+..
T Consensus 98 G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~---------~~~~~~~~~-----~~~~~~~~------- 156 (579)
T PRK09192 98 GLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELL---------PWVNEATHG-----NPLLHVLS------- 156 (579)
T ss_pred CCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHH---------HHHHHhhcc-----ccccceee-------
Confidence 999999987543 68999999999999999976531 122221111 00111110
Q ss_pred ccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEE
Q 004034 354 TRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYW 433 (778)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l 433 (778)
|.++........+.....+++++||+|||||||.||||+++|++++.+........+++.++|+++
T Consensus 157 --------------~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l 222 (579)
T PRK09192 157 --------------HAWFKALPEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCV 222 (579)
T ss_pred --------------hhhhcccCCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEE
Confidence 111111111111122346789999999999999999999999996655443333378899999999
Q ss_pred EeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc-ccccCCCCcee
Q 004034 434 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE-YVTRYSRKSLR 512 (778)
Q Consensus 434 ~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~-~~~~~~l~sLr 512 (778)
+.+|++|..+++..++.++..|+++++........++..+++++.++++|+++..|.++..+...... .....+++++|
T Consensus 223 ~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr 302 (579)
T PRK09192 223 SWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWR 302 (579)
T ss_pred EeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhh
Confidence 99999999997777888899999998765322223678899999999999887766656555433211 12235788999
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCC---cceecccccccccceecccCCCCC--------------------------CC
Q 004034 513 VLGSVGEPINPSAWRWFFNVVGDSR---CPISDTWWQTETGGFMITPLPGAW--------------------------PQ 563 (778)
Q Consensus 513 ~v~~gGe~l~~~~~~~~~~~~g~~~---~~i~~~YG~TE~g~~~~~~~~~~~--------------------------~~ 563 (778)
.+++||+++++++++.+.+.++..+ ..+++.||+||++...+....... ..
T Consensus 303 ~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (579)
T PRK09192 303 VAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVR 382 (579)
T ss_pred eeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccce
Confidence 9999999999999999988774221 358999999999865443211100 01
Q ss_pred CCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEE
Q 004034 564 KPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWL 643 (778)
Q Consensus 564 ~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~ 643 (778)
...++|+|+++++++|+|+++++++.|+.|||+|+| +++++|||++ +.+...+. .+|||+|||+|++ +||+++|
T Consensus 383 ~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~i~g--~~~~~gY~~~-~~~~~~~~--~dgw~~TGDlg~~-~~G~l~~ 456 (579)
T PRK09192 383 TFVNCGKALPGHEIEIRNEAGMPLPERVVGHICVRG--PSLMSGYFRD-EESQDVLA--ADGWLDTGDLGYL-LDGYLYI 456 (579)
T ss_pred eEeecCCcCCCcEEEEECCCCCCCCCCCEEEEEecC--CchhhhhcCC-cccccccc--CCceeeccceeeE-ECCEEEE
Confidence 125789999999999999999999999999999999 8999999999 54544443 3789999999999 9999999
Q ss_pred EeecCCEEEeCceeeCHHHHHHHHhcCCccc--eEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcC-C
Q 004034 644 TGRVDDVINVSGHRIGTAEVESALVSHPQCA--EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIG-A 720 (778)
Q Consensus 644 ~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~--ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp-~ 720 (778)
+||+||+||++|++|+|.|||++|.+||+|. +|+|++++++. ++.++++|+..++.. ...++|++++++.+. .
T Consensus 457 ~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~---~~~~~l~~~~~~~l~~~ 532 (579)
T PRK09192 457 TGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDE---ERRGQLIHALAALVRSE 532 (579)
T ss_pred EeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCCh---HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 89999998874 558888888765432 224677777777764 5
Q ss_pred CccccEEEECC--CCCCCCCCcccHHHHHHHHhcc
Q 004034 721 FAAPDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 721 ~~~P~~i~~v~--~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
+++|..+++++ +||+|++||++|++|++++..-
T Consensus 533 ~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~ 567 (579)
T PRK09192 533 FGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSG 567 (579)
T ss_pred hCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHcC
Confidence 78888888885 8999999999999999998653
No 106
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.1e-61 Score=556.93 Aligned_cols=487 Identities=22% Similarity=0.278 Sum_probs=390.6
Q ss_pred ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEE
Q 004034 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 309 (778)
Q Consensus 230 ~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~ii 309 (778)
.+.+||.||.++++++|++|.++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++++++++++
T Consensus 9 ~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~ 88 (509)
T PRK12406 9 DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLI 88 (509)
T ss_pred CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcc----ccc-cccCCCCcccchhhccCCCCCCCCcccc
Q 004034 310 TSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAM----TRE-NTKWQDGRDIWWQDVVPKYPTKCEVEWV 384 (778)
Q Consensus 310 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~----~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 384 (778)
++..... .+.+... ..+. ++........ ... ...........|.+...... +....
T Consensus 89 ~~~~~~~---------~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 149 (509)
T PRK12406 89 AHADLLH---------GLASALP------AGVT-VLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE---PYDGP 149 (509)
T ss_pred Eccchhh---------hhhhhhh------cccc-eeecccccccccccccccccccCCCCccCHHHHhcccC---ccCCC
Confidence 8765321 1111110 0111 1111110000 000 00000111223333322211 12234
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHH--HHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH--TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~--~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.++++++|+|||||||.||+|+++|...... ........+++.++++++...|+.|..++.+. +.++..|+++++.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~~~~~g~~~~~~~ 228 (509)
T PRK12406 150 PVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYG-LRAGRLGGVLVLQP 228 (509)
T ss_pred CCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHH-HHHHhhheEEEEcc
Confidence 5789999999999999999999987753222 12233456788999999999999998875544 45688999998875
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceec
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD 542 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~ 542 (778)
. .+++.+++.++++++|.+.++|++++.|++.........+++++|.+++||+++++++++++.+.++ +.+++
T Consensus 229 ~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~---~~~~~ 301 (509)
T PRK12406 229 R----FDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWG---PVIYE 301 (509)
T ss_pred C----CCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcC---CcEEe
Confidence 3 4889999999999999999999999999876543334557889999999999999999999999886 67999
Q ss_pred ccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccc-cccCChhhhhhhccC
Q 004034 543 TWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFR-TLYGDHERYETTYFK 621 (778)
Q Consensus 543 ~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~-gY~~~~~~~~~~~~~ 621 (778)
.||+||++.+++.... .....++++|+|+++++++|+|+++++++.|+.|||++++ ++++. +|+++++.+....
T Consensus 302 ~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~--~~~~~~~y~~~~~~~~~~~-- 376 (509)
T PRK12406 302 YYGSTESGAVTFATSE-DALSHPGTVGKAAPGAELRFVDEDGRPLPQGEIGEIYSRI--AGNPDFTYHNKPEKRAEID-- 376 (509)
T ss_pred eccccccCceEecCcc-cccccCCCcCccCCCcEEEEECCCCCCCCCCCceEEEEEC--CccccccccCCchhccccc--
Confidence 9999999976553322 1234567899999999999999999999999999999999 77764 8999887665432
Q ss_pred CCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCC
Q 004034 622 PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP 701 (778)
Q Consensus 622 ~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~ 701 (778)
.+|||+|||++++++||++++.||.||+||++|++|+|.|||++|.+||+|.+++|++.++...++.++++|++.++..
T Consensus 377 -~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 455 (509)
T PRK12406 377 -RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGAT 455 (509)
T ss_pred -CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCC
Confidence 3789999999999999999999999999999999999999999999999999999999998877888999999876543
Q ss_pred CCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 702 YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 702 ~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
.+ .++|++++++.|++|++|..++++++||+|++||++|+.|++.+..
T Consensus 456 ~~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 456 LD---EADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred CC---HHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHh
Confidence 33 5789999999999999999999999999999999999999988764
No 107
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-62 Score=569.64 Aligned_cols=511 Identities=20% Similarity=0.240 Sum_probs=380.2
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCC---CCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHH
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~---~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l 278 (778)
+.++|++++. .+|+++|+++.+.. .+..+++||+||.++++++|++|+++| ++||+|+|+++|++++++++|||+
T Consensus 3 ~~~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~ 80 (578)
T PRK05850 3 VPSLLRERAS-LQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGAL 80 (578)
T ss_pred HHHHHHHHHh-cCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHH
Confidence 5577889888 89999999975321 122478999999999999999999999 689999999999999999999999
Q ss_pred HhCCEEEeCCC---CCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCcccc
Q 004034 279 RIGAVHSVVFA---GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 355 (778)
Q Consensus 279 ~~Gav~vpl~p---~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 355 (778)
++|++++|+++ .++.+++.++|+++++++|++++... ..+.+...... ......++.++...
T Consensus 81 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~---- 145 (578)
T PRK05850 81 QAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVV---------DDVTEYVAPQP--GQSAPPVIEVDLLD---- 145 (578)
T ss_pred HcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHH---------HHHHHHHhhcc--cccccceEeecccc----
Confidence 99999999997 55789999999999999999986532 11211111100 00111122111100
Q ss_pred ccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC-----CCCCc
Q 004034 356 ENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-----YKPSD 430 (778)
Q Consensus 356 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~-----~~~~d 430 (778)
+ .. ..........++++++|+|||||||.||||+++|++++.+........+. ...++
T Consensus 146 ------------~----~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (578)
T PRK05850 146 ------------L----DS-PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDT 208 (578)
T ss_pred ------------c----cc-CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcc
Confidence 0 00 00001123457899999999999999999999999966554433333333 34578
Q ss_pred EEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHH-HHHHhcCC-cccccCCC
Q 004034 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLV-RSLMRDGN-EYVTRYSR 508 (778)
Q Consensus 431 ~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l-~~L~~~~~-~~~~~~~l 508 (778)
++++..|++|+.|++..++.+++.|+++++.++.....++..+++++++++++++ .+|+++ ..+..... ......++
T Consensus 209 ~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~ 287 (578)
T PRK05850 209 TVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDL 287 (578)
T ss_pred eEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcch
Confidence 9999999999999888899999999999998643222378999999999999865 555554 33333211 11223467
Q ss_pred CceeEEEEecCCCCHHHHHHHHHHhCC---CCcceecccccccccceecccCCCCCC-----------------------
Q 004034 509 KSLRVLGSVGEPINPSAWRWFFNVVGD---SRCPISDTWWQTETGGFMITPLPGAWP----------------------- 562 (778)
Q Consensus 509 ~sLr~v~~gGe~l~~~~~~~~~~~~g~---~~~~i~~~YG~TE~g~~~~~~~~~~~~----------------------- 562 (778)
+++|.+++||++++++++++|.+.++. .+..+++.||+||++..+........+
T Consensus 288 ~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 367 (578)
T PRK05850 288 GGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGG 367 (578)
T ss_pred hhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCC
Confidence 899999999999999999999887742 234689999999987544322111000
Q ss_pred CCCCCcCcCcCCceEEEECC-CCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC---------CCCCeEEcCcE
Q 004034 563 QKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK---------PFPGYYFTGDG 632 (778)
Q Consensus 563 ~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~---------~~~G~yrTGDl 632 (778)
....+.|.|. +.+++|+|+ ++++++.|+.|||+|+| |++++|||++++.+.+.|.. ..+|||+|||+
T Consensus 368 ~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl 444 (578)
T PRK05850 368 TPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHG--DNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDL 444 (578)
T ss_pred ceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEec--CcccccccCChhhhHHHhhcccccccccCCCCCeeeccce
Confidence 0112345554 578999995 57899999999999999 89999999999988887742 12469999999
Q ss_pred EEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHH---HHHH
Q 004034 633 CSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEE---LRKS 709 (778)
Q Consensus 633 ~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~---l~~~ 709 (778)
|+++ ||+++|+||+||+||++|++|+|.|||++|.+||.+ +++|++++++ .++.++|+|+++++...+++ ..++
T Consensus 445 ~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~ 521 (578)
T PRK05850 445 GFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRT 521 (578)
T ss_pred eeEE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHH
Confidence 9998 999999999999999999999999999999999995 5888888886 67889999998765432211 2345
Q ss_pred HHHHHHhhcCC--CccccEEEECC--CCCCCCCCcccHHHHHHHHhcc
Q 004034 710 LVLAVRKQIGA--FAAPDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 710 l~~~l~~~Lp~--~~~P~~i~~v~--~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
+++.+...++. ...|..+++++ .||+|++|||+|++|++.+.+.
T Consensus 522 l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 522 VKREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred HHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcC
Confidence 55555544432 23566666664 8999999999999999998653
No 108
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-61 Score=551.94 Aligned_cols=446 Identities=19% Similarity=0.165 Sum_probs=374.2
Q ss_pred HHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEE
Q 004034 206 LDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHS 285 (778)
Q Consensus 206 l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~v 285 (778)
...+++ ++|+++|++.. ++.+||+||.++++++|..|++.|+++||+|+++++|++++++++|||+++|++++
T Consensus 9 ~~~~a~-~~~~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v 81 (458)
T PRK09029 9 WRHWAQ-VRPQAIALRLN------DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVL 81 (458)
T ss_pred HHHHHH-hCCCceeeecC------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEe
Confidence 345566 89999999865 67899999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcc
Q 004034 286 VVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRD 365 (778)
Q Consensus 286 pl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 365 (778)
|+++.++.+++..++++++++++++.++... + .. +.... ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~----~~-------~~~~~-~~----------------- 122 (458)
T PRK09029 82 PLNPQLPQPLLEELLPSLTLDFALVLEGENT----------F----SA-------LTSLH-LQ----------------- 122 (458)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEEcCcccc----------h----hh-------ccccc-cc-----------------
Confidence 9999999999999999999999998765321 0 00 00000 00
Q ss_pred cchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhh
Q 004034 366 IWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHS 445 (778)
Q Consensus 366 ~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~ 445 (778)
. ....+.....++++++++|||||||.||||+++|++++.. .......+++.++|+++...|++|.+++
T Consensus 123 --------~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~h~~g~- 191 (458)
T PRK09029 123 --------L-VEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLAS-AEGVLSLMPFTAQDSWLLSLPLFHVSGQ- 191 (458)
T ss_pred --------c-ccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHH-HHHHhhcCCCCccceEEEecCcHhhhhh-
Confidence 0 0001112346789999999999999999999999996554 4444556788899999999999999885
Q ss_pred HHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHH
Q 004034 446 YVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSA 525 (778)
Q Consensus 446 ~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~ 525 (778)
..++.+|..|+++++.+. ..+++.+ .++|.+..+|+++..|+..... ..++|.+++||+++++.+
T Consensus 192 ~~~~~~l~~G~~v~~~~~-------~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~------~~~l~~i~~gG~~~~~~~ 256 (458)
T PRK09029 192 GIVWRWLYAGATLVVRDK-------QPLEQAL--AGCTHASLVPTQLWRLLDNRSE------PLSLKAVLLGGAAIPVEL 256 (458)
T ss_pred HHHHHHHhCCceEEeCCh-------HHHHHHH--hhceeeecChHHHHHHHhcccc------CCcceEEEECCCCCCHHH
Confidence 456778999999998642 4567777 4799999999999998876432 347999999999999999
Q ss_pred HHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCccc
Q 004034 526 WRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAF 605 (778)
Q Consensus 526 ~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~ 605 (778)
.+++.+. + +++++.||+||++...+.... ....++|+|+++++++|+| |||+|+| +.++
T Consensus 257 ~~~~~~~-g---~~~~~~YG~tE~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~-----------gel~v~g--~~~~ 315 (458)
T PRK09029 257 TEQAEQQ-G---IRCWCGYGLTEMASTVCAKRA----DGLAGVGSPLPGREVKLVD-----------GEIWLRG--ASLA 315 (458)
T ss_pred HHHHHHc-C---CcEeccccccccCcceeccCC----CCCCCCCCCCCCCEEEEeC-----------CEEEEec--Ccee
Confidence 9988754 4 789999999999865443221 1235699999999999976 8999999 8999
Q ss_pred ccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCC
Q 004034 606 RTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEV 685 (778)
Q Consensus 606 ~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~ 685 (778)
.||+++++.+... ..+|||+|||+|++| ||+++|.||+||+||++|++|+|.|||++|.+||+|.||+|++++++.
T Consensus 316 ~gY~~~~~~~~~~---~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~ 391 (458)
T PRK09029 316 LGYWRQGQLVPLV---NDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAE 391 (458)
T ss_pred eeeecCccccccc---cCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcc
Confidence 9999998765422 236899999999999 999999999999999999999999999999999999999999999988
Q ss_pred CCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcc
Q 004034 686 KGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 753 (778)
Q Consensus 686 ~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 753 (778)
.++.++++|+..... ..++|+++++++|++|++|..+++++++|+|.+||++|+.|++++.+.
T Consensus 392 ~~~~~~a~v~~~~~~-----~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~ 454 (458)
T PRK09029 392 FGQRPVAVVESDSEA-----AVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQ 454 (458)
T ss_pred cCceEEEEEEcCccc-----CHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhc
Confidence 889999999876332 257899999999999999999999999999999999999999999854
No 109
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-60 Score=555.51 Aligned_cols=506 Identities=21% Similarity=0.255 Sum_probs=392.1
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
..+.|++.++ .+|+++|+++. +..+||+||.++++++|.+|.+.|+++||+|+|+++|++++++++|||+++|
T Consensus 20 ~~~~~~~~~~-~~~~~~a~~~~------~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 92 (545)
T PRK08162 20 PLSFLERAAE-VYPDRPAVIHG------DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAG 92 (545)
T ss_pred HHHHHHHHHH-HCCCCeEEEEC------CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhC
Confidence 5577888888 89999999886 5789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCC
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (778)
++++|++|.++.+++.+++++++++++++++... ..+.++...+ +.. ..+.++..... .....
T Consensus 93 ~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~----~~~-~~~~~~~~~~~---~~~~~ 155 (545)
T PRK08162 93 AVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFA---------EVAREALALL----PGP-KPLVIDVDDPE---YPGGR 155 (545)
T ss_pred cEEeccccccChHHHHHHHHhCCCeEEEEccchh---------hHHHHHHhhC----CCC-ceEEEecCccc---cccCC
Confidence 9999999999999999999999999999987642 2223322222 111 12222211100 00000
Q ss_pred CCcccchhhccCCCCCCCC-ccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcch
Q 004034 362 DGRDIWWQDVVPKYPTKCE-VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (778)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~-~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 440 (778)
......+.+.+........ ....+.+++++|+|||||||.||||+++|++++.+.... ...+++..++++++..|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~-~~~~~~~~~~~~l~~~pl~h 234 (545)
T PRK08162 156 FIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSN-ILAWGMPKHPVYLWTLPMFH 234 (545)
T ss_pred CcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHH-HHhcCCCCCCeeEeccCcHh
Confidence 0011223333322211111 112244679999999999999999999999865544333 34567788899999999999
Q ss_pred hhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCC
Q 004034 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 441 ~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (778)
..+..+.++.++ .|++.++... +++..+++.|+++++|++.++|++++.|++.... ....+.+++.++++|++
T Consensus 235 ~~~~~~~~~~~~-~~g~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~~~~~~~~g~~ 307 (545)
T PRK08162 235 CNGWCFPWTVAA-RAGTNVCLRK----VDPKLIFDLIREHGVTHYCGAPIVLSALINAPAE--WRAGIDHPVHAMVAGAA 307 (545)
T ss_pred hhhHHHHHHHHH-HccEEEEeCC----CCHHHHHHHHHHcCCeEEEechHHHHHHHhCccc--cccCCccceEEEECCCC
Confidence 887655544444 4555555432 4899999999999999999999999999876542 12244567778899999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCC-C--------CCCCCCCcCcCcCC-ceEEEECC-CCceeCC
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG-A--------WPQKPGSATFPFFG-VQPVIVDE-KGVEIEG 589 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~-~--------~~~~~~~~G~p~~g-~~~~Ivd~-~g~~~~~ 589 (778)
+++++.+++.+. + +++++.||+||+++........ . ....+.+.|.+++. ..++|+|+ ++++++.
T Consensus 308 ~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~ 383 (545)
T PRK08162 308 PPAAVIAKMEEI-G---FDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPA 383 (545)
T ss_pred CCHHHHHHHHHh-C---CceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCC
Confidence 999999888764 4 7899999999986543322110 0 01123456766653 45788885 7888875
Q ss_pred -C-eeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHH
Q 004034 590 -E-CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESAL 667 (778)
Q Consensus 590 -g-~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L 667 (778)
| +.|||+|+| +.++.||+++++.+...|. +|||+|||++++|+||+++|+||.||+||++|+||+|.|||++|
T Consensus 384 ~g~~~Gel~v~g--~~~~~gY~~~~~~~~~~~~---~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l 458 (545)
T PRK08162 384 DGETIGEIMFRG--NIVMKGYLKNPKATEEAFA---GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVL 458 (545)
T ss_pred CCCceeEEEEec--CcchhhhcCChhhhHHHhh---CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHH
Confidence 3 469999999 8899999999998877663 58999999999999999999999999999999999999999999
Q ss_pred hcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 668 VSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 668 ~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
.+||+|.+++|++.+++..++.++++|+++++...+ .++|++++++.|+.|++|..+++ ++||+|++||++|+.|+
T Consensus 459 ~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~ 534 (545)
T PRK08162 459 YRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASAT---EEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLR 534 (545)
T ss_pred HhCCcccEEEEEeeeccccCceEEEEEEeCCCCCCC---HHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHH
Confidence 999999999999999887788999999988765433 56899999999999999999875 68999999999999999
Q ss_pred HHHhc
Q 004034 748 KIASR 752 (778)
Q Consensus 748 ~~~~~ 752 (778)
+.+..
T Consensus 535 ~~~~~ 539 (545)
T PRK08162 535 EQAKS 539 (545)
T ss_pred HHHhh
Confidence 98764
No 110
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=8.4e-61 Score=540.03 Aligned_cols=518 Identities=22% Similarity=0.307 Sum_probs=387.4
Q ss_pred ccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHH
Q 004034 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (778)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~v 271 (778)
.|..-...+.+..++.+++. .+|+.+|+.+.. .+.++.+||+|+.+++.++|++|+++|+.+||+|+|++.|++||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~--~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~ 84 (613)
T COG1022 8 AWEDVAEIHTLPKRLAERVK-DRPDGVALMYKE--LGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWA 84 (613)
T ss_pred cchhhhhcccHHHHHHHHhh-cCCcceeEeeec--CCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH
Confidence 34433444467788888888 899988988765 366899999999999999999999999977999999999999999
Q ss_pred HHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEE-E---E
Q 004034 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCL-T---Y 347 (778)
Q Consensus 272 va~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi-~---~ 347 (778)
++.+||+.+|++.||+++..+++.++++|+++++++||+.+... .+.+......+ +.+.... . +
T Consensus 85 i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~--------~~~~~~~~~~~----~~~~~~~~~~~~~ 152 (613)
T COG1022 85 IADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQEL--------LDLVLPVLEDC----PKVVDLIVIIDLV 152 (613)
T ss_pred HHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHH--------HHHHHhhhccc----cchhhhhhhhhhh
Confidence 99999999999999999999999999999999999999987542 12222222211 0000000 0 0
Q ss_pred ccCCccccccccC-CCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhC-
Q 004034 348 ENQSAMTRENTKW-QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD- 425 (778)
Q Consensus 348 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~- 425 (778)
+............ .......+ ............+..+||+|.|+|||||||.||||+++|+|++.+ .......+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~-v~~~~~~~~~ 229 (613)
T COG1022 153 REAVEAKALVLEVFPDEGISLF--LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQ-VAGIDEVLPP 229 (613)
T ss_pred hhccchhhccccccccccchhh--hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHH-HHHHHhhCCC
Confidence 0000000000000 00011111 111111222225678999999999999999999999999996555 445556675
Q ss_pred CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCC-----
Q 004034 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN----- 500 (778)
Q Consensus 426 ~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~----- 500 (778)
+.++|++++++|+.|++...+.....+..|+++... .++..+++.++++++|.+..+|.+++.+.+.-.
T Consensus 230 ~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~------~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~ 303 (613)
T COG1022 230 IGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK------EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAK 303 (613)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec------CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHh
Confidence 889999999999999998765544444444444433 388999999999999999999999988743210
Q ss_pred cc------------------------------------------cccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCc
Q 004034 501 EY------------------------------------------VTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRC 538 (778)
Q Consensus 501 ~~------------------------------------------~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~ 538 (778)
.. ..... .++|.+++||.+|++++..+++.. | +
T Consensus 304 ~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l-G---i 378 (613)
T COG1022 304 APAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL-G---I 378 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc-C---C
Confidence 00 00111 489999999999999999888775 3 8
Q ss_pred ceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhh
Q 004034 539 PISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETT 618 (778)
Q Consensus 539 ~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~ 618 (778)
++..+||+|||++..+.+.+.. ..++++|.|+|+++++|.| .|||+|+| |.+|+|||++|+.|.+.
T Consensus 379 ~i~eGYGlTEts~~~~v~~~~~--~~~gtvG~p~p~~evKI~d----------~GEilVRG--~~Vm~GYyk~pe~Taea 444 (613)
T COG1022 379 PILEGYGLTETSAVVSVNPPDR--FVLGTVGKPLPGIEVKIAD----------DGEILVRG--PNVMKGYYKNPEATAEA 444 (613)
T ss_pred CeEEEecccccccceEEccccC--cccCCcCCcCCCceEEEcc----------CceEEEec--chhcchhcCChHHHhhh
Confidence 9999999999998877765543 5789999999999999998 49999999 99999999999999999
Q ss_pred ccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeC-ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEc
Q 004034 619 YFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLV 697 (778)
Q Consensus 619 ~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~-G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~ 697 (778)
|.. +|||+|||+|.+|++|+|.++||++|.||.+ |+.|.|..||+.+.++|-|.+++|++ .+ ...++|.|++.
T Consensus 445 f~~--DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~---k~~~~AlIvp~ 518 (613)
T COG1022 445 FTE--DGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DD---KKFLVALIVPD 518 (613)
T ss_pred ccc--cCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cC---CcceEEEEeCC
Confidence 876 8999999999999999999999999999997 99999999999999999999999998 32 34588999986
Q ss_pred CCCC------------CC-------HHHHHHHHHHHHh---hcCCCccccEEEECC-CCC-----CCCCCcccHHHHHHH
Q 004034 698 EGVP------------YS-------EELRKSLVLAVRK---QIGAFAAPDKIHWAP-GLP-----KTRSGKIMRRILRKI 749 (778)
Q Consensus 698 ~~~~------------~~-------~~l~~~l~~~l~~---~Lp~~~~P~~i~~v~-~lP-----~T~sGKi~R~~L~~~ 749 (778)
.+.- .+ .++.+.+...+.+ .+..+..+..++.++ ++. .|+.-|+.|..+.+.
T Consensus 519 ~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~ 598 (613)
T COG1022 519 FDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDR 598 (613)
T ss_pred HHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHh
Confidence 4210 01 1122222222222 234455666666654 343 588899999999999
Q ss_pred HhcccCcCC
Q 004034 750 ASRQLDELG 758 (778)
Q Consensus 750 ~~~~~~~~~ 758 (778)
+..+++.++
T Consensus 599 ~~~~i~~~y 607 (613)
T COG1022 599 YKDEIEAVY 607 (613)
T ss_pred hhhHHHHHh
Confidence 887766554
No 111
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-59 Score=525.30 Aligned_cols=403 Identities=18% Similarity=0.200 Sum_probs=348.9
Q ss_pred ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEE
Q 004034 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 309 (778)
Q Consensus 230 ~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~ii 309 (778)
++++||+||.++++++|+.|. +|+++|++|+|+++|++++++++|||+++|++++|+++..+.+++..+++++++++++
T Consensus 6 ~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i 84 (414)
T PRK08308 6 DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLL 84 (414)
T ss_pred CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEE
Confidence 579999999999999999985 7899999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCc
Q 004034 310 TSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDP 389 (778)
Q Consensus 310 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~ 389 (778)
+++.... . .. .....++++
T Consensus 85 ~~~~~~~------------------------~------~~-------------------------------~~~~~~~~~ 103 (414)
T PRK08308 85 YGESDFT------------------------K------LE-------------------------------AVNYLAEEP 103 (414)
T ss_pred ecCcccc------------------------c------cc-------------------------------CCCCCCCCc
Confidence 8653100 0 00 001346889
Q ss_pred EEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCC
Q 004034 390 LFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPD 469 (778)
Q Consensus 390 a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~ 469 (778)
++|+|||||||.||||+++|+++.. ........+++..+|+++..+|+.|.++++..++.+|..|+++++.+. ++
T Consensus 104 ~~i~~TSGtTG~PKgv~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~~ 178 (414)
T PRK08308 104 SLLQYSSGTTGEPKLIRRSWTEIDR-EIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN----KN 178 (414)
T ss_pred eEEEECCCCCCCCcEEEEehHhHHH-HHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC----CC
Confidence 9999999999999999999999654 344445567888899999999999999887888999999999999864 48
Q ss_pred hhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccc
Q 004034 470 SGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTET 549 (778)
Q Consensus 470 ~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~ 549 (778)
+..+++.++++++|.++++|+++..|.+.... ..+++.++++|+++++++++++.+.. .++++.||+||+
T Consensus 179 ~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~------~~~l~~~~~~G~~l~~~~~~~~~~~~----~~~~~~YG~tE~ 248 (414)
T PRK08308 179 PKFALNILRNTPQHILYAVPLMLHILGRLLPG------TFQFHAVMTSGTPLPEAWFYKLRERT----TYMMQQYGCSEA 248 (414)
T ss_pred HHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc------cccccEEEEccCCCCHHHHHHHHHhC----ChhhhccCcccc
Confidence 89999999999999999999999999876431 13688999999999999999988762 579999999999
Q ss_pred cceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEc
Q 004034 550 GGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFT 629 (778)
Q Consensus 550 g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrT 629 (778)
+.+..... ...++++|+|++++++++.++. ++.|||++++ . ++||+|
T Consensus 249 ~~~~~~~~----~~~~~~~G~p~~~~~~~~~~~~------~~~gel~v~~--~---------------------~~~~~T 295 (414)
T PRK08308 249 GCVSICPD----MKSHLDLGNPLPHVSVSAGSDE------NAPEEIVVKM--G---------------------DKEIFT 295 (414)
T ss_pred CCeeecCC----CCCCCccCccCCCeEEEEecCC------CCCceEEEEc--C---------------------CceEEC
Confidence 86543211 1345789999999999987643 4579999987 1 479999
Q ss_pred CcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHH
Q 004034 630 GDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKS 709 (778)
Q Consensus 630 GDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~ 709 (778)
||+|++|+||+++|+||.||+||++|+||+|.|||++|.+||+|.+|+|++++++..++.++++++..... + .++
T Consensus 296 GDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~~--~---~~~ 370 (414)
T PRK08308 296 KDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEEI--D---PVQ 370 (414)
T ss_pred CceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC--C---HHH
Confidence 99999999999999999999999999999999999999999999999999999988889999999876532 2 468
Q ss_pred HHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHH
Q 004034 710 LVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 747 (778)
Q Consensus 710 l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~ 747 (778)
|+++++++|++|++|..++++++||+|++||++|+.|+
T Consensus 371 l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 371 LREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 89999999999999999999999999999999999654
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2e-59 Score=529.50 Aligned_cols=435 Identities=23% Similarity=0.318 Sum_probs=360.3
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCC
Q 004034 234 TYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 313 (778)
Q Consensus 234 TY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~ 313 (778)
||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEE
Q 004034 314 VKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLL 393 (778)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il 393 (778)
.... .+. ...+.... .... ...........+++++|+
T Consensus 81 ~~~~--~~~---------------------~~~~~~~~-------------------~~~~-~~~~~~~~~~~~~~~~i~ 117 (436)
T TIGR01923 81 LEEK--DFQ---------------------ADSLDRIE-------------------AAGR-YETSLSASFNMDQIATLM 117 (436)
T ss_pred cccc--cee---------------------ecchHhhh-------------------hccc-ccccccccCCcCceEEEE
Confidence 3210 000 00000000 0000 000112234578999999
Q ss_pred eCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHH
Q 004034 394 YTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRS 473 (778)
Q Consensus 394 ~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~ 473 (778)
|||||||.||+|+++|+++... .......+++.++|++++..|+.|..+. ..++.++..|+++++.++ ...+
T Consensus 118 ~TSGtTG~PK~v~~s~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~------~~~~ 189 (436)
T TIGR01923 118 FTSGTTGKPKAVPHTFRNHYAS-AVGSKENLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDK------FNQL 189 (436)
T ss_pred eCCCCCCCCcEEEEehHHHHHH-HHHHHhhcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecch------HHHH
Confidence 9999999999999999996544 4455567899999999999999998874 567899999999999753 2489
Q ss_pred HHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceeccccccccccee
Q 004034 474 WDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFM 553 (778)
Q Consensus 474 ~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~ 553 (778)
++.++++++|++.++|++++.|.+.... .+++|.++++||++++++.+++.. ++ +++++.||+||++...
T Consensus 190 ~~~l~~~~~t~~~~~P~~l~~l~~~~~~------~~~l~~~~~~G~~~~~~~~~~~~~-~~---~~~~~~YG~tE~~~~~ 259 (436)
T TIGR01923 190 LEMIANERVTHISLVPTQLNRLLDEGGH------NENLRKILLGGSAIPAPLIEEAQQ-YG---LPIYLSYGMTETCSQV 259 (436)
T ss_pred HHHHHHhCCeEEEeHHHHHHHHHhCcCC------CCceEEEEECCCCCCHHHHHHHHH-hC---CceeeEecCCccchhc
Confidence 9999999999999999999999887531 168999999999999999988765 34 7899999999998755
Q ss_pred cccCCCCCCCCCCCcCcCcCCceEEE-ECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcE
Q 004034 554 ITPLPGAWPQKPGSATFPFFGVQPVI-VDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDG 632 (778)
Q Consensus 554 ~~~~~~~~~~~~~~~G~p~~g~~~~I-vd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl 632 (778)
+.........++ ++|+|+++++++| .|+.+ +.|||+|++ +.+++||+++++.+...+ .+|||+|||+
T Consensus 260 ~~~~~~~~~~~~-~~G~~~~~~~~~i~~~~~~------~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~~~~~TGD~ 327 (436)
T TIGR01923 260 TTATPEMLHARP-DVGRPLAGREIKIKVDNKE------GHGEIMVKG--ANLMKGYLYQGELTPAFE---QQGWFNTGDI 327 (436)
T ss_pred cCcCcccccccc-CCCccCCCcEEEEEeCCCC------CceEEEEEC--CccchhhCCChhhhhhhh---cCCCeeccce
Confidence 433222211222 4899999999999 44332 679999999 899999999876554432 2689999999
Q ss_pred EEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHH
Q 004034 633 CSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVL 712 (778)
Q Consensus 633 ~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~ 712 (778)
+++++||++++.||.||+||++|++|++.|||++|.++|.|.+++|++.++...+..++++|+..++.. .+++.+
T Consensus 328 ~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~l~~ 402 (436)
T TIGR01923 328 GELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESDIS-----QAKLIA 402 (436)
T ss_pred EEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCCCC-----HHHHHH
Confidence 999999999999999999999999999999999999999999999999987777788999998876422 468889
Q ss_pred HHHhhcCCCccccEEEECCCCCCCCCCcccHHHH
Q 004034 713 AVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRIL 746 (778)
Q Consensus 713 ~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L 746 (778)
++++.|+.|++|..|+++++||+|++||++|++|
T Consensus 403 ~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 403 YLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred HHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 9999999999999999999999999999999875
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-59 Score=546.37 Aligned_cols=498 Identities=19% Similarity=0.152 Sum_probs=382.1
Q ss_pred HHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhC
Q 004034 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~G 281 (778)
+++.|..++. ..|+.+++...+ ..+.+||.||+++++++|++|++.|+++||+|+|+++|++++++++|||+++|
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~~----~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g 78 (545)
T PRK07768 4 FTEKMYANAR-TSPRGMVTGEPD----APVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRG 78 (545)
T ss_pred HHHHHHHHhh-CCCcceEEecCC----CceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 5566667777 789999886653 26789999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCCCCCHHHH-------HHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccc
Q 004034 282 AVHSVVFAGFSSDSL-------AQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 354 (778)
Q Consensus 282 av~vpl~p~~~~~~l-------~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 354 (778)
++++|+++..+.+++ ..+++.++++++++++.... . .+.+.. ... .++
T Consensus 79 ~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~----~~~~~~--~~~-~~~--------- 133 (545)
T PRK07768 79 ASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLA---------A----APVLEE--KGI-RVL--------- 133 (545)
T ss_pred ccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhh---------h----hhhhcc--cCC-cee---------
Confidence 999999998886554 45677789999999765321 0 000000 000 011
Q ss_pred cccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCC-cEEE
Q 004034 355 RENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPS-DVYW 433 (778)
Q Consensus 355 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~-d~~l 433 (778)
.++++....+. ......++++++|+|||||||+||||+++|++++. ........+++.++ |+++
T Consensus 134 ------------~~~~l~~~~~~--~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~~d~~~ 198 (545)
T PRK07768 134 ------------TVADLLAADPI--DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYA-NAEAMFVAAEFDVETDVMV 198 (545)
T ss_pred ------------ehhhhcccCCC--CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHH-HHHHHHHhcCCCCCCceeE
Confidence 12222221111 22345679999999999999999999999999654 44445556777776 8999
Q ss_pred EeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc--ccccCCCCce
Q 004034 434 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE--YVTRYSRKSL 511 (778)
Q Consensus 434 ~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~--~~~~~~l~sL 511 (778)
+..|++|..++...++.++..|++++++.+.....++..++++++++++|++.++|.++..|...... .....++++|
T Consensus 199 ~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 278 (545)
T PRK07768 199 SWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSL 278 (545)
T ss_pred EeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchhe
Confidence 99999999987777778899999999886533334788899999999999998888887766643211 0113578899
Q ss_pred eEEEEecCCCCHHHHHHHHHH---hCCCCcceecccccccccceecccCCCC------------------------CCCC
Q 004034 512 RVLGSVGEPINPSAWRWFFNV---VGDSRCPISDTWWQTETGGFMITPLPGA------------------------WPQK 564 (778)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~---~g~~~~~i~~~YG~TE~g~~~~~~~~~~------------------------~~~~ 564 (778)
|.++++|+++++++.+++.+. ++.....+++.||+||++..++....+. ....
T Consensus 279 r~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (545)
T PRK07768 279 RFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRR 358 (545)
T ss_pred eeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcce
Confidence 999999999999999998874 4432345999999999987543321110 0123
Q ss_pred CCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEE
Q 004034 565 PGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLT 644 (778)
Q Consensus 565 ~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~ 644 (778)
++++|+|+++++++|+|+++++++.|+.|||+++| +.+++||++++... ... ..+|||+|||++++++||+++++
T Consensus 359 ~~~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~-~~~--~~~g~~~TGDl~~~~~~g~l~~~ 433 (545)
T PRK07768 359 LATLGPPLPGLEVRVVDEDGQVLPPRGVGVIELRG--ESVTPGYLTMDGFI-PAQ--DADGWLDTGDLGYLTEEGEVVVC 433 (545)
T ss_pred EEeccCCCCCCEEEEECCCCCCCCCCCEEEEEEcc--CcccccccCCCCCc-ccc--cCCCeeeccceEEEecCCEEEEE
Confidence 46899999999999999999999999999999999 89999999865432 222 23679999999999999999999
Q ss_pred eecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEe--cCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCC-
Q 004034 645 GRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVE--HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAF- 721 (778)
Q Consensus 645 GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~--~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~- 721 (778)
||.||+||++|++|+|.|||++|.+||+|.+++|+++. +...++.++++|...... ++....++.+++++.++.+
T Consensus 434 GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~l~~~~~~~l~~~~ 511 (545)
T PRK07768 434 GRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFE--DPAEVRRIRHQVAHEVVAEV 511 (545)
T ss_pred ccccceEEECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccc--cHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998887765 333455555555544322 2222345666666655443
Q ss_pred -ccccEEEECC--CCCCCCCCcccHHHHHHHHh
Q 004034 722 -AAPDKIHWAP--GLPKTRSGKIMRRILRKIAS 751 (778)
Q Consensus 722 -~~P~~i~~v~--~lP~T~sGKi~R~~L~~~~~ 751 (778)
..|..+.+++ +||+|++||++|+.|++.+.
T Consensus 512 ~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 512 GVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 5788888886 89999999999999998764
No 114
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-59 Score=517.06 Aligned_cols=536 Identities=22% Similarity=0.265 Sum_probs=413.3
Q ss_pred ccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcC--CCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChH
Q 004034 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAN--DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME 269 (778)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~--~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e 269 (778)
.|+.+.. ++++.|.+.+. ..|+.+++-+... ..+..+.+||.|..+++.++|..|+++|+++++.|+|+.-|++|
T Consensus 69 ~~~~~~~--T~~~~f~~~~~-~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pE 145 (691)
T KOG1256|consen 69 CPFDGPL--TLYEGFRRSVE-KSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPE 145 (691)
T ss_pred CCCCCcc--cHHHHhhcchh-ccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChh
Confidence 4554443 58999999998 9999999987652 22558899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhh-cCCCccEEEEEc
Q 004034 270 LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK-SGISVDVCLTYE 348 (778)
Q Consensus 270 ~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vi~~~ 348 (778)
|+++++||...|++.|||...++++++.++++++...++|++++.. +...++.... ..+.++.++.++
T Consensus 146 Wiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k-----------~~~ll~~~~~~~~~~LK~iI~~~ 214 (691)
T KOG1256|consen 146 WIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKK-----------AEKLLEIKENDSLPSLKAIIQLD 214 (691)
T ss_pred hHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHH-----------HHHHHhhcccccCccceeEEEec
Confidence 9999999999999999999999999999999999999999986532 2233332221 136688888887
Q ss_pred cCCccccccccCCCCcccchhhccCCCC-CCCCc-cccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH---HHHHh
Q 004034 349 NQSAMTRENTKWQDGRDIWWQDVVPKYP-TKCEV-EWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT---TFKYA 423 (778)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~-~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~---~~~~~ 423 (778)
..............-...+|+++++-.. ....+ .+..|+|+|.|+|||||||.|||||+||+|++..... .....
T Consensus 215 ~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~ 294 (691)
T KOG1256|consen 215 EPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAE 294 (691)
T ss_pred CCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcc
Confidence 6532110010111112456777765442 12222 5788999999999999999999999999996553222 11111
Q ss_pred hC--CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCc
Q 004034 424 FD--YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 501 (778)
Q Consensus 424 ~~--~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~ 501 (778)
.. ....|++++++|++|++..+...+. +..|+.+.++.+ |+..+.+-|++.++|.+.++|.+|+.+.+.-.+
T Consensus 295 ~~~~~~~~dv~lSyLPLAHi~er~~~~~~-~~~G~~IgF~~g-----D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~ 368 (691)
T KOG1256|consen 295 NAKATVGDDVYLSYLPLAHIFERVVELYT-FYIGAKIGFARG-----DILKLTDDLKELKPTVFPGVPRVLERIYEGIQK 368 (691)
T ss_pred cccccccCceEEEeCcHHHHHHHHHHHhH-hhcccEEEEecC-----ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHH
Confidence 11 2236999999999999987777654 588999999986 778888889999999999999999887432100
Q ss_pred c------------------------cccCC-------------------CCceeEEEEecCCCCHHHHHHHHHHhCCCCc
Q 004034 502 Y------------------------VTRYS-------------------RKSLRVLGSVGEPINPSAWRWFFNVVGDSRC 538 (778)
Q Consensus 502 ~------------------------~~~~~-------------------l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~ 538 (778)
. ..+.. -..+|.+++|++|+++++.+.++..+| +
T Consensus 369 ~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g---~ 445 (691)
T KOG1256|consen 369 QVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG---C 445 (691)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC---c
Confidence 0 00000 136899999999999999999999987 8
Q ss_pred ceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECC-CCceeCCCeeeEEEEecCCCcccccccCChhhhhh
Q 004034 539 PISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYET 617 (778)
Q Consensus 539 ~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~ 617 (778)
+|+++||+|||++.++...++. ...+++|.|+|+++++++|. +.+.-+.|..|||||+| +.++.|||+||++|.+
T Consensus 446 ~v~eGYGlTEts~g~~~~~~~d--~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG--~~Vf~GYyK~p~~T~e 521 (691)
T KOG1256|consen 446 RVLEGYGLTETSAGTTLTLPGD--NVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRG--PNVFMGYYKDPEKTAE 521 (691)
T ss_pred eeeecccccccCCceEeccCCC--CCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEec--chhceeccCChHHHhh
Confidence 9999999999996555555544 26799999999999999884 44445556689999999 9999999999999999
Q ss_pred hccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeC-ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEE
Q 004034 618 TYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 696 (778)
Q Consensus 618 ~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~-G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 696 (778)
.+.. +||+||||+|+|+++|.|.++||+++.+|++ |+.|.|..||++..+.+-|.+.+|.+.. ....|+|.|++
T Consensus 522 ~ide--DGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s---~~~~LvaiVvp 596 (691)
T KOG1256|consen 522 AIDE--DGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDS---LRSFLVAIVVP 596 (691)
T ss_pred hhcc--ccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCc---chhcEEEEEec
Confidence 8865 8999999999999999999999999999998 9999999999999999999999998643 24579999999
Q ss_pred cCCCCCC-----------------HHH----HHHHHHHHH-hhcCCCccccEEEECC------CCCCCCCCcccHHHHHH
Q 004034 697 VEGVPYS-----------------EEL----RKSLVLAVR-KQIGAFAAPDKIHWAP------GLPKTRSGKIMRRILRK 748 (778)
Q Consensus 697 ~~~~~~~-----------------~~l----~~~l~~~l~-~~Lp~~~~P~~i~~v~------~lP~T~sGKi~R~~L~~ 748 (778)
+.....+ ..+ ..++.+.-+ +.|..+..-+.|.+.+ .=-+||+-|+.|..|.+
T Consensus 597 d~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~ 676 (691)
T KOG1256|consen 597 DPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLK 676 (691)
T ss_pred ChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHH
Confidence 6542210 011 122222222 2355555556666643 22368899999999999
Q ss_pred HHhcccCcCCC
Q 004034 749 IASRQLDELGD 759 (778)
Q Consensus 749 ~~~~~~~~~~~ 759 (778)
.+++++|+++.
T Consensus 677 ~yk~~Id~mY~ 687 (691)
T KOG1256|consen 677 YYKKQIDELYK 687 (691)
T ss_pred HHHHHHHHHHh
Confidence 99999887753
No 115
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=4.6e-56 Score=499.01 Aligned_cols=411 Identities=29% Similarity=0.454 Sum_probs=321.1
Q ss_pred HHHhhhccCCCeEEEEE-EcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEE
Q 004034 206 LDRNIEAGLGDKVAIYW-EANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVH 284 (778)
Q Consensus 206 l~~~~~~~~pd~~Al~~-~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~ 284 (778)
|+++|+ ++||++|+++ . ++++||+||+++++++|..|+++|+++||+|+|+++|++++++++|||+++|+++
T Consensus 1 f~~~a~-~~pd~~a~~~~~------~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~ 73 (417)
T PF00501_consen 1 FERQAQ-RYPDRIALIDDE------GRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIP 73 (417)
T ss_dssp HHHHHH-HSTTSEEEEETT------TEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EE
T ss_pred ChhHHh-hCCCceEEEECC------CEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccc
Confidence 678888 8999999998 3 7999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCc
Q 004034 285 SVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGR 364 (778)
Q Consensus 285 vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 364 (778)
+|++|.++.+++.++++.+++++||+ .+.. +-.. +........ .......++.++..... ...
T Consensus 74 v~l~~~~~~~~~~~~l~~~~~~~ii~-~~~~------d~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~ 136 (417)
T PF00501_consen 74 VPLDPSLSEDELRHILRQSGPKVIIT-SEAV------DSEP-LKKLKSIFK-QEDPSSSIIILDRDDLP--------KKE 136 (417)
T ss_dssp EEEETTSSHHHHHHHHHHHTESEEEE-CHHH------SCHH-HHHHHHHHT-TSTTTEEEEEESHSSCT--------TCH
T ss_pred cccccccccccccccccccceeEEEE-eccc------cccc-cccchhhhc-ccccccccccccccccc--------ccc
Confidence 99999999999999999999999998 2000 0011 122222110 00123344555433210 000
Q ss_pred ccchhhccCCCCCCCCccc-cCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHH-HHhhCCCCCcEEEEeCCcchhh
Q 004034 365 DIWWQDVVPKYPTKCEVEW-VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF-KYAFDYKPSDVYWCTADCGWIT 442 (778)
Q Consensus 365 ~~~~~~~l~~~~~~~~~~~-~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~ 442 (778)
.. .......... .. ..++++++|+|||||||.||+|.++|++++....... ...++++ |++++.+|++|..
T Consensus 137 ~~-~~~~~~~~~~----~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~ 209 (417)
T PF00501_consen 137 AL-KSASLSDEPQ----SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIF 209 (417)
T ss_dssp HH-HHHHHCHCSH----STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHH
T ss_pred cc-cccccccccc----cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccc
Confidence 00 0000000000 00 0579999999999999999999999999655544321 2223333 6999999999999
Q ss_pred hhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcc--cccCCCCceeEEEEecCC
Q 004034 443 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY--VTRYSRKSLRVLGSVGEP 520 (778)
Q Consensus 443 g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~--~~~~~l~sLr~v~~gGe~ 520 (778)
+++..++.+|..|+++++++.... .+++.+++.++++++|+++++|++++.|++..... ....++++||.++++|++
T Consensus 210 g~~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~ 288 (417)
T PF00501_consen 210 GLISALLAALFSGATLVLPSPFDL-FDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEP 288 (417)
T ss_dssp HHHHHHHHHHHCTSEEEEESSHHH-HHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST
T ss_pred cccccccccccccccccccccccc-cccccchhccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 976899999999999999976432 23577899999999999999999999999843211 123478899999999999
Q ss_pred CCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCC-CceeCCCeeeEEEEec
Q 004034 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEK-GVEIEGECSGYLCIKS 599 (778)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~-g~~~~~g~~GEL~v~g 599 (778)
+++++++++.+.++. .+|++.||+||++.+.+.........+++++|+|+++++++|+|++ +++++.|+.|||+|+|
T Consensus 289 l~~~~~~~~~~~~~~--~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~ 366 (417)
T PF00501_consen 289 LPPDLLRRLRKAFGN--APIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRG 366 (417)
T ss_dssp -CHHHHHHHHHHHTT--SEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEES
T ss_pred CChhhcccccccccc--ccceecccccccceeeecccccccccccccccccccccccccccccccccccccccccccccC
Confidence 999999999999983 5899999999999887644211112366789999999999999987 9999999999999999
Q ss_pred CCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeC
Q 004034 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS 654 (778)
Q Consensus 600 ~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~ 654 (778)
|.++.||+++++.+.+.|.. +|||+|||+|++|+||+|+++||+||+||+|
T Consensus 367 --~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 367 --PNVFSGYYNDPELTAEAFID--DGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp --TTSBSEETTBHHHHHHHEET--TSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred --Cccceeeecccccccccccc--ccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 89999999999999888764 5799999999999999999999999999986
No 116
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.1e-54 Score=455.93 Aligned_cols=524 Identities=20% Similarity=0.242 Sum_probs=394.0
Q ss_pred HHHHHhhhccCCC-eEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCE-EEEEeCCChHHHHHHHHHHHhC
Q 004034 204 NCLDRNIEAGLGD-KVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDA-VIIYLPMLMELPIAMLACARIG 281 (778)
Q Consensus 204 ~~l~~~~~~~~pd-~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~-Vai~~~~s~e~vva~LA~l~~G 281 (778)
++++++.+ +.+| ++...++ .+.-..+||.|+.+++.++|++|.++|++++++ |+|+++.+.+|+++++||++.+
T Consensus 64 ~li~~h~e-k~~dGK~f~k~~---Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ 139 (678)
T KOG1180|consen 64 ELIKEHEE-KQVDGKTFEKYE---LGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQN 139 (678)
T ss_pred HHHHHHhh-ccCCCeEEEEEe---ccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcC
Confidence 45566655 4444 3444443 255788999999999999999999999997776 9999999999999999999999
Q ss_pred CEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccc-ccccc-
Q 004034 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT-RENTK- 359 (778)
Q Consensus 282 av~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~- 359 (778)
...|.+...++.+.|.+-|.+++++.|||+.+.. +.+...+..+ ..++++|.++..+... .+..+
T Consensus 140 ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL---------~kl~~~l~~~----~~vk~II~~d~id~~~~~~~v~~ 206 (678)
T KOG1180|consen 140 IPVVTAYATLGEEALIHSLNETESTAIFTDSELL---------PKLKAPLKQA----KTVKHIIYFDPIDYDAAKDDVNS 206 (678)
T ss_pred CeEEEEehhcChhhhhhhhccccceEEEeCHHHH---------HHHHHHHhcc----CceeEEEEecCCCCccchhhhhh
Confidence 9999999999999999999999999999987642 2333344444 6788888887532110 00111
Q ss_pred C--CCCcccchhhccCCCCC-CCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeC
Q 004034 360 W--QDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 436 (778)
Q Consensus 360 ~--~~~~~~~~~~~l~~~~~-~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~ 436 (778)
. +.-..+.+++.+.-... ..++.+..|+|+|.|+|||||||.||||+++|.|+++...........+.+.|+++.++
T Consensus 207 i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yL 286 (678)
T KOG1180|consen 207 IVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYL 286 (678)
T ss_pred hccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEec
Confidence 0 11223455555543322 23445558899999999999999999999999997766666566666889999999999
Q ss_pred CcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChh-H----HHHHHHHhCccEEEecHHHHHHHHhcCCcccc-------
Q 004034 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSG-R----SWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVT------- 504 (778)
Q Consensus 437 ~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~-~----~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~------- 504 (778)
|+.|+..+.+++ .++..|+++-..+..... |.. . .---+...|+|++.++|.++..+.+.-.+...
T Consensus 287 PLAHIlEl~aE~-~~ft~G~~iGY~S~~TLt-dts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k 364 (678)
T KOG1180|consen 287 PLAHILELTAEL-VCFTWGGRIGYSSPLTLT-DTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQK 364 (678)
T ss_pred hHHHHHHHHHHH-HHHhhCCEeecCCcceec-ccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHH
Confidence 999999988775 578899988765432111 111 0 01123467899999999988877442100000
Q ss_pred --------------c-------------------CCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccc
Q 004034 505 --------------R-------------------YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGG 551 (778)
Q Consensus 505 --------------~-------------------~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~ 551 (778)
. ..-..||.+++||.||+++..+++...+. |++..+||.||+++
T Consensus 365 ~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C---~Pv~qGYGLTEtca 441 (678)
T KOG1180|consen 365 KLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFC---CPVLQGYGLTETCA 441 (678)
T ss_pred HHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcc---ccccccccccchhc
Confidence 0 00136999999999999999999888875 79999999999987
Q ss_pred eecccCCCCCCCCCCCcCcCcCCceEEEECC-CCceeCCC--eeeEEEEecCCCcccccccCChhhhhhhccCCCCC--e
Q 004034 552 FMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGE--CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--Y 626 (778)
Q Consensus 552 ~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g--~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G--~ 626 (778)
..+...+.. ...+.+|.|++-++++++|= +|--.+.+ -.|||+|+| +++..|||++++.+.+.|.. .+| |
T Consensus 442 ~~tv~e~~d--~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G--~~vt~gY~kn~ekT~e~ft~-~~G~~W 516 (678)
T KOG1180|consen 442 AATVLEPED--FSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGG--PNVTMGYYKNEEKTKEDFTV-EDGQRW 516 (678)
T ss_pred ccEecChhh--cccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecC--CccChhhhCChhhhhhhcee-cCCcEE
Confidence 655443332 35578999999999999982 32222111 379999999 99999999999999999976 567 9
Q ss_pred EEcCcEEEEecCCeEEEEeecCCEEEe-CceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCC-----
Q 004034 627 YFTGDGCSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV----- 700 (778)
Q Consensus 627 yrTGDl~~~~~dG~l~~~GR~dd~Iki-~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~----- 700 (778)
|+|||+|++.+||+|.|++|++|.||. +|+-|+++-||++++..|-|...+|.+-. ....++++||+.++.
T Consensus 517 F~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~---~~s~~VaiVVPn~~~lt~lA 593 (678)
T KOG1180|consen 517 FRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADS---NKSKPVAIVVPNQKHLTKLA 593 (678)
T ss_pred EeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccc---ccceeEEEEcCCchHHHHHH
Confidence 999999999999999999999999998 59999999999999999999999998653 345799999997531
Q ss_pred -----CC--------CHHH----HHHHHHHH-HhhcCCCccccEEEECCCCCCCC-CC------cccHHHHHHHHhcccC
Q 004034 701 -----PY--------SEEL----RKSLVLAV-RKQIGAFAAPDKIHWAPGLPKTR-SG------KIMRRILRKIASRQLD 755 (778)
Q Consensus 701 -----~~--------~~~l----~~~l~~~l-~~~Lp~~~~P~~i~~v~~lP~T~-sG------Ki~R~~L~~~~~~~~~ 755 (778)
.. +..+ .++|.++- .+.|..+.+|..|++.+ .|.|| || |+.|+.++..+..+++
T Consensus 594 ~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~-e~WTPenGlvT~A~KLKRk~I~~~~k~ei~ 672 (678)
T KOG1180|consen 594 EKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSP-EPWTPENGLVTAALKLKRKEILAAYKKEID 672 (678)
T ss_pred HHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecC-CCcCCCccccHHHHHhhHHHHHHHHHHHHH
Confidence 11 1112 23333333 44688999999999885 46665 44 9999999999988876
Q ss_pred cCC
Q 004034 756 ELG 758 (778)
Q Consensus 756 ~~~ 758 (778)
.++
T Consensus 673 ~~Y 675 (678)
T KOG1180|consen 673 RLY 675 (678)
T ss_pred HHh
Confidence 654
No 117
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-53 Score=505.39 Aligned_cols=494 Identities=20% Similarity=0.226 Sum_probs=398.4
Q ss_pred CCCCccchhhhhhhccccCCCCCcccCCChhhhhccCCCChHHHHHHHHHHhhCHHHHHHHHHhhcccccccCccccccc
Q 004034 102 SGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSEN 181 (778)
Q Consensus 102 ~~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (778)
+.+++||+++.+.++ .+...+.|.+++|++.++.++.++|..++..++.+|+..++++.. +...+. . . ++
T Consensus 148 ~~~~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~l-l~~~e~--~-~--~~ 217 (642)
T COG1020 148 TPAAKLDLALAVVEG----GLRLSFDYARELFDAETIERELRHFLQLLAALADAPRTSLSALPL-LLPSER--E-V--WN 217 (642)
T ss_pred CcccccceEEEEEeC----ceEEEEEeecccCCHHHHHHHHHHHHHHHHHHHhCcccCcccCCC-CCHHHH--h-h--cc
Confidence 567899998886633 677899999999999999999999999999999999977766642 222211 0 0 11
Q ss_pred ccccCCCcccccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 004034 182 LDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVI 261 (778)
Q Consensus 182 ~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Va 261 (778)
. .+......-+++.+|.++++ +.|+++|+.+. ..++||+||+.+++++|+.|++.|++++++|+
T Consensus 218 -~--------~~~~~~~~~~i~~~f~~~a~-~~p~~~a~~~~------~~~lty~el~~~a~~la~~l~~~g~~~~~~V~ 281 (642)
T COG1020 218 -A--------LAAPIPLRLTIHLLFEEQAA-TTPDAVALVRG------GQQLTYAELDARANRLARLLISLGVGPGETVA 281 (642)
T ss_pred -c--------cccCCCccchHHHHHHHHHH-hCCCceeEecC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEE
Confidence 0 11111111268999999998 99999999986 68999999999999999999999999999999
Q ss_pred EEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCc
Q 004034 262 IYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISV 341 (778)
Q Consensus 262 i~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (778)
++++++++++++++|++|+|++|+|+||.+|.+|+.++++++++++++++........ ..
T Consensus 282 i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~ 341 (642)
T COG1020 282 ILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV--------------------GL 341 (642)
T ss_pred EEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccc--------------------cC
Confidence 9999999999999999999999999999999999999999999999999843321000 00
Q ss_pred cEEEEEccCCccccccccCCCCcccchhhccCCCCCCCC-ccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHH
Q 004034 342 DVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCE-VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF 420 (778)
Q Consensus 342 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~ 420 (778)
.. +.++.. ....+...+ .....+++++|++|||||||+||||+++|++. .+...+.
T Consensus 342 ~~-~~~~~~---------------------~~~~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~-~~~~~~~ 398 (642)
T COG1020 342 PG-LALDDA---------------------LSEIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRAL-ANLLNDA 398 (642)
T ss_pred Cc-cccccc---------------------cccCCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHH-HHHHHHH
Confidence 00 111100 000000011 23345689999999999999999999999995 4466666
Q ss_pred HHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCC
Q 004034 421 KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN 500 (778)
Q Consensus 421 ~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~ 500 (778)
...+.+..+|+++...++.|+.+ ++.+|.+++.|+++++.+.... .++..+.+.+.++++|++..+|.++..++....
T Consensus 399 ~~~~~~~~~d~~l~~~s~~fD~~-~~~~f~~l~~G~~l~~~~~~~~-~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~ 476 (642)
T COG1020 399 GARFGLDADDRVLALASLSFDAS-VFEIFGALLEGARLVLAPALLQ-VDPAALLELLEAQGITVLLLVPLLLRLLLLAAL 476 (642)
T ss_pred HHhcCCCcccEEeecCCcccchh-HHHHHHHHhCCCEEEecCcccc-CCHHHHHHHHHHcCCEEEEecHHHHHHHHhchh
Confidence 66799999999999999999986 8899999999999999887544 489999999999999999999999999987632
Q ss_pred cccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEE
Q 004034 501 EYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV 580 (778)
Q Consensus 501 ~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Iv 580 (778)
..........+|.+++|||.++.++...+...... ...+.|.||+||++................++|+|++|++++|+
T Consensus 477 ~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~-~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~il 555 (642)
T COG1020 477 APDLISPCERLRQLLSGGEALPLALVQRLLQLAAL-ARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYIL 555 (642)
T ss_pred hccccCCcccccEEEEcCCCCCHHHHHHHHHhccc-cceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEE
Confidence 21112233459999999999999999988876543 36799999999976544322111111114689999999999999
Q ss_pred CCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCH
Q 004034 581 DEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGT 660 (778)
Q Consensus 581 d~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~ 660 (778)
|+.++++|.|+.|||+|.| .++++||+++++.+...|+.. .+|+|||++++++||.+.++||.|+|||++|+||++
T Consensus 556 d~~~~~~p~gv~gel~i~g--~~~a~gy~~~p~lt~~~f~~~--~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel 631 (642)
T COG1020 556 DQGLRPLPLGVPGELYIAG--LGLALGYLNRPDLTAERFIAL--RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIEL 631 (642)
T ss_pred CCCCCcCCCCCCeeeEECC--cchhhhhcCChhhhHHHhhhc--cCccCCCeeeECCCCeEEEeccccceeEeceEecCc
Confidence 9999999999999999999 899999999999999998764 499999999999999999999999999999999999
Q ss_pred HHHHHHHhcCC
Q 004034 661 AEVESALVSHP 671 (778)
Q Consensus 661 ~eIE~~L~~~p 671 (778)
+|||..+.+||
T Consensus 632 ~eie~~l~~~~ 642 (642)
T COG1020 632 GEIEAALAEQP 642 (642)
T ss_pred HHHHHHHhcCC
Confidence 99999999886
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.5e-51 Score=458.97 Aligned_cols=397 Identities=24% Similarity=0.286 Sum_probs=327.6
Q ss_pred cHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcC
Q 004034 234 TYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 312 (778)
Q Consensus 234 TY~eL~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~ 312 (778)
||.||.+.++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 8999999999999999999999999999999999999999999999999999999999987
Q ss_pred CcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchhhccCCC-CCCCCccccCCCCcEE
Q 004034 313 AVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLF 391 (778)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~d~a~ 391 (778)
......+. .....+.++... ....... ..........++++++
T Consensus 81 ~~~~~~~~-------------------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~ 124 (408)
T TIGR01733 81 ALASRLAG-------------------LVLPIILVDPLE-----------------LAALDDAPAPPPPDAPSGPDDLAY 124 (408)
T ss_pred chhhhccc-------------------cCCceEEechhh-----------------hhhcccccccccccCCCCCCCcEE
Confidence 64321100 000111111100 0000000 0000111145789999
Q ss_pred EEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChh
Q 004034 392 LLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSG 471 (778)
Q Consensus 392 Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~ 471 (778)
|+|||||||.||+|+++|++++.. .......+++.++|++++..|+.|..+ .+.++.++..|+++++++..... .+.
T Consensus 125 i~~TSGTtG~pK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~l~~g~~~~~~~~~~~~-~~~ 201 (408)
T TIGR01733 125 VIYTSGSTGRPKGVVVTHRSLVNL-LAWLARRYGLDPDDRVLQFASLSFDAS-VEEIFGTLLAGATLVVPPEDEER-DAA 201 (408)
T ss_pred EEEcCCCCCCCCEEEeccHHHHHH-HHHHHHhcCCCCCceEEEecCCccchh-HHHHHHHHhCCCEEEEcChhhcc-CHH
Confidence 999999999999999999996544 444555788889999999999999987 56789999999999998764332 578
Q ss_pred HHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccc
Q 004034 472 RSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGG 551 (778)
Q Consensus 472 ~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~ 551 (778)
.+.++++++++|.+.++|++++.|++... ..+++||.++++|+++++++++++.+.++ ++.+++.||+||++.
T Consensus 202 ~~~~~~~~~~~t~l~~~p~~~~~l~~~~~-----~~~~~l~~v~~~g~~~~~~~~~~~~~~~~--~~~i~~~YG~tE~g~ 274 (408)
T TIGR01733 202 LLAALIAEHPVTVLNLTPSLLALLAAALP-----PALASLRLVILGGEALTPALVDRWRARGP--GARLINLYGPTETTV 274 (408)
T ss_pred HHHHHHHHcCceEEEeCHHHHHHHHHhhh-----hcccCceEEEEeCccCCHHHHHHHHHhCC--CcEEEecccCCceEE
Confidence 89999999999999999999999998753 46789999999999999999999999987 478999999999997
Q ss_pred eeccc-CCCCCCC--CCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC----CCC
Q 004034 552 FMITP-LPGAWPQ--KPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----PFP 624 (778)
Q Consensus 552 ~~~~~-~~~~~~~--~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~----~~~ 624 (778)
++... ....... ++.++|+|+++++++|+|+++++++.|+.|||+|++ +.++.||+++++.+...+.. ..+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~~~~~~~ 352 (408)
T TIGR01733 275 WSTATLVDADDAPRESPVPIGRPLANTRLYVLDDDLRPVPVGVVGELYIGG--PGVARGYLNRPELTAERFVPDPFAGGD 352 (408)
T ss_pred EEEEEEcCccccCCccccccCcccCCceEEEECCCCCCCCCCCceEEEecC--ccccccccCChhhhhcceeeCCCCCCC
Confidence 66422 1111111 277899999999999999999999999999999999 89999999999877766542 223
Q ss_pred C--eEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEE
Q 004034 625 G--YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 678 (778)
Q Consensus 625 G--~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~V 678 (778)
| ||+|||++++|++|++++.||.||+|+++|++|+|.|||++|.+||.|.+|+|
T Consensus 353 ~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 353 GARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred CceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 4 99999999999999999999999999999999999999999999999999875
No 119
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-51 Score=435.02 Aligned_cols=504 Identities=23% Similarity=0.296 Sum_probs=392.9
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHh
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~ 280 (778)
+++++|.++|+ ++|+++|+++.++ .+++||+|+++.++|+|+.|...|++.||.|+|+|+|.+|++..-|+.+|+
T Consensus 78 ti~~~F~~~vr-r~p~k~aii~~~~----~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKl 152 (649)
T KOG1179|consen 78 TIAELFLSQVR-RQPDKPAIIYEGP----FQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKL 152 (649)
T ss_pred cHHHHHHHHHH-hCCCccEEEEeCC----CceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhh
Confidence 47899999999 9999999999943 689999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccC
Q 004034 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (778)
Q Consensus 281 Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (778)
|++...||++.-.+.|.|-|..++++.+|+..+.. ..+.++++.+... .-.++..+...
T Consensus 153 Gv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~---------~~~~e~~~~l~~~---~i~~~~~~~~~--------- 211 (649)
T KOG1179|consen 153 GVITAFINTNLRGEPLLHSITVSGARALVVGPELL---------NALEEILPLLIKN---GIHVFSLGPTS--------- 211 (649)
T ss_pred CceeeeeccccccchhhhhhhhcCceEEEECHHHH---------HHHHhcchhhhhc---cceEEecCCCC---------
Confidence 99999999999999999999999999999987743 3333333332111 01122222111
Q ss_pred CCCcccchhhccCCCCCCC----CccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeC
Q 004034 361 QDGRDIWWQDVVPKYPTKC----EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 436 (778)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~----~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~ 436 (778)
.+....++...++..+... .....+..+++..||||||||.||..+++|.-++ ..+..+-..++++++|+++..+
T Consensus 212 ~~~g~~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~-~~a~g~~~~~g~~~~DvvY~~l 290 (649)
T KOG1179|consen 212 VPDGIESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYL-QGAAGFYYVFGMTADDVVYTTL 290 (649)
T ss_pred CCchHHHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHH-HHHHHHHHHhCCCccceEEEcc
Confidence 1112223333333332222 2234566789999999999999999999999854 4455466789999999999999
Q ss_pred CcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEE
Q 004034 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGS 516 (778)
Q Consensus 437 ~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~ 516 (778)
|++|.++.+..+-++|..|+|+|+-.. ++...||+-+.+|+||++.-.--+.|.|+..+.... ..-..+|..+
T Consensus 291 PLYHsaa~ilGi~~~l~~GaT~VlrkK----FSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~--er~HkVRla~- 363 (649)
T KOG1179|consen 291 PLYHSAAGILGIGGCLLHGATVVLRKK----FSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPE--ERQHKVRLAY- 363 (649)
T ss_pred hhHHHHHHHHHHHHHHhcCceEEEecc----cchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChh--hcCceEEEEe-
Confidence 999999999999999999999999654 699999999999999999999999999998876432 2345677766
Q ss_pred ecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCc------CcCCceEEEEC---------
Q 004034 517 VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATF------PFFGVQPVIVD--------- 581 (778)
Q Consensus 517 gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~------p~~g~~~~Ivd--------- 581 (778)
|..|.+++|+.|.++||. ..|.+.||+||...-.+ +..+ +-|.+|+ -+.-+++.=+|
T Consensus 364 -GNGLR~diW~~Fv~RFg~--~~IgE~YgaTEgn~~~~-N~d~----~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd 435 (649)
T KOG1179|consen 364 -GNGLRPDIWQQFVKRFGI--IKIGEFYGATEGNSNLV-NYDG----RVGACGFMSRLLKLLYPFRLIKVDPETGEPIRD 435 (649)
T ss_pred -cCCCCchHHHHHHHHcCC--CeEEEEeccccCcceee-eecC----ccccccchhhhhhhccceEEEEecCCCCceeec
Confidence 888999999999999995 67999999999876433 3221 1222222 11122222223
Q ss_pred CCC--ceeCCCeeeEEEEecCCCc---ccccccCChhhhh----hhccCCCCCeEEcCcEEEEecCCeEEEEeecCCEEE
Q 004034 582 EKG--VEIEGECSGYLCIKSSWPG---AFRTLYGDHERYE----TTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 652 (778)
Q Consensus 582 ~~g--~~~~~g~~GEL~v~g~~p~---v~~gY~~~~~~~~----~~~~~~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Ik 652 (778)
++| .+|++|++|.|+-+=.-.. -+.||.+..+.+. .+.|.+.+-||.|||+-.+|+.|++||.+|..|.+.
T Consensus 436 ~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFR 515 (649)
T KOG1179|consen 436 SQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFR 515 (649)
T ss_pred CCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCcee
Confidence 333 3578999997764421122 3789999654443 344565555999999999999999999999999999
Q ss_pred eCceeeCHHHHHHHHhcCCccceEEEEEEecCCC-CeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECC
Q 004034 653 VSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVK-GQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP 731 (778)
Q Consensus 653 i~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~-~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~ 731 (778)
-.|++|++.|||++|.....+.|+.|.|+.-+.. |..=.|.|+.++....+ .+++-+++++.||+|+.|..+.+++
T Consensus 516 WKGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d---~~~l~~~l~~~LP~YA~P~FlRl~~ 592 (649)
T KOG1179|consen 516 WKGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKD---LEKLYQHLRENLPSYARPRFLRLQD 592 (649)
T ss_pred ecCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcccch---HHHHHHHHHhhCccccchHHHHHHh
Confidence 9999999999999999999999999999986643 33334555555554433 6789999999999999999999999
Q ss_pred CCCCCCCCcccHHHHHHH
Q 004034 732 GLPKTRSGKIMRRILRKI 749 (778)
Q Consensus 732 ~lP~T~sGKi~R~~L~~~ 749 (778)
++++|.+=|..+..|.+.
T Consensus 593 ~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 593 EIEKTGTFKLQKTELQKE 610 (649)
T ss_pred hhhcccchhhHHHHHHHc
Confidence 999999999999998875
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-47 Score=422.76 Aligned_cols=324 Identities=23% Similarity=0.269 Sum_probs=271.9
Q ss_pred cCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcC
Q 004034 384 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (778)
Q Consensus 384 ~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~ 463 (778)
..++|+++|+|||||||.||||+++|+++...... .... +...++++...|++|+.++ ..++.+++.|+++++++.
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~-~~~~--~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADA-THDR--LGGPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHH-HHhc--cCCCCeEEEECChHHHHHH-HHHHHHHHcCCeEEecCc
Confidence 34689999999999999999999999996544332 2222 3345788999999999984 567788999999988543
Q ss_pred CCCCCChhHHHHHHHHhC--ccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCccee
Q 004034 464 APTYPDSGRSWDIVDKYK--VTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (778)
Q Consensus 464 ~~~~~~~~~~~~~i~~~~--vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~ 541 (778)
... +++..+++.+++++ +++...+|+.+..++.... ...+++++|.+++|||++++++++++.+. + ++++
T Consensus 108 ~~~-~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~---~~~~~~~l~~i~~gG~~l~~~~~~~~~~~-~---~~v~ 179 (358)
T PRK07824 108 SAG-FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA---ATAALAELDAVLVGGGPAPAPVLDAAAAA-G---INVV 179 (358)
T ss_pred CCC-cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc---ccCCcccceEEEECCCCCCHHHHHHHHhc-C---CcEE
Confidence 222 58999999999998 5566778988887766533 22467899999999999999999988753 4 7899
Q ss_pred cccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC
Q 004034 542 DTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK 621 (778)
Q Consensus 542 ~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~ 621 (778)
+.||+||++..+. ..|+|+++++++|.| |||+++| |.++.||+++++.. .+.
T Consensus 180 ~~YG~TE~~~~~~------------~~G~~~~g~~v~i~~-----------Gei~v~g--~~~~~gY~~~~~~~--~~~- 231 (358)
T PRK07824 180 RTYGMSETSGGCV------------YDGVPLDGVRVRVED-----------GRIALGG--PTLAKGYRNPVDPD--PFA- 231 (358)
T ss_pred ecccCCccCCCcC------------cCceeCCCCEEEecC-----------CEEEEec--CccccccCCCcccc--ccc-
Confidence 9999999875321 258899999999843 8999999 89999999988632 222
Q ss_pred CCCCeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCC
Q 004034 622 PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP 701 (778)
Q Consensus 622 ~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~ 701 (778)
.+|||+|||++++ +||+++++||.||+||++|++|+|.|||++|.+||+|.+|+|++.+++..++.++++|+.+.+..
T Consensus 232 -~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~ 309 (358)
T PRK07824 232 -EPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPA 309 (358)
T ss_pred -CCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCC
Confidence 3679999999999 89999999999999999999999999999999999999999999999888899999998775443
Q ss_pred CCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhc
Q 004034 702 YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 702 ~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 752 (778)
.. .++|++++++.|+.|++|..|+++++||+|++||++|++|++++.+
T Consensus 310 ~~---~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 310 PT---LEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred cC---HHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 33 6789999999999999999999999999999999999999998863
No 121
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=4e-44 Score=439.43 Aligned_cols=498 Identities=15% Similarity=0.071 Sum_probs=354.5
Q ss_pred ccCCCCcccHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHH
Q 004034 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (778)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~v 271 (778)
+|.+-...+++.++|++.++ ++|+++|+.+... .+..+.+||+|+.+++.++|.+|+++|+++||+|+|+++|++||+
T Consensus 419 ~~~~~~~~~Tl~dll~~~a~-~~pd~~al~~~~~-~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewv 496 (1452)
T PTZ00297 419 EYNPLAGVRSLGEMWERSVT-RHSTFRCLGQTSE-SGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIV 496 (1452)
T ss_pred cCCCcccCCCHHHHHHHHHH-HCCCCeEEEEecc-CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH
Confidence 55555556678899999998 8999999974311 123578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCC
Q 004034 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (778)
Q Consensus 272 va~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 351 (778)
++.+||+++|++.||+++ +.+++.++++++++++||+++... ..+.+ .. ...++++++++...
T Consensus 497 ia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l---------~kl~~---i~---~~~Lr~IIv~d~~~ 559 (1452)
T PTZ00297 497 ILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSV---------AAILT---CR---SRKLETVVYTHSFY 559 (1452)
T ss_pred HHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHH---------HHHHh---hc---ccCCcEEEEECCCc
Confidence 999999999999999985 467899999999999999975431 11111 11 13577888875321
Q ss_pred ccccccccCC-CCcccchhhccCCCCC--CCCccccCCCCcEEEEe---CCCCCCCCceEEEccchHHHHHHHHHHHh--
Q 004034 352 AMTRENTKWQ-DGRDIWWQDVVPKYPT--KCEVEWVDAEDPLFLLY---TSGSTGKPKGVLHTTGGYMVHTATTFKYA-- 423 (778)
Q Consensus 352 ~~~~~~~~~~-~~~~~~~~~~l~~~~~--~~~~~~~~~~d~a~Il~---TSGSTG~PKgV~~th~~~l~~~~~~~~~~-- 423 (778)
.......... ....+.|++.++.... .......+++|++.|+| ||||||.||||++||+|++.+........
T Consensus 560 ~~~~~~~~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~ 639 (1452)
T PTZ00297 560 DEDDHAVARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVL 639 (1452)
T ss_pred ccccccccccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccc
Confidence 0000000000 0112446666654321 11123347889999996 99999999999999999766554433211
Q ss_pred hCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccc
Q 004034 424 FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV 503 (778)
Q Consensus 424 ~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~ 503 (778)
....++|++++++|++|+++. ...+.++..|+++.. ++++.+++.|+++++|++.++|++++.+........
T Consensus 640 ~~~~~~D~~Ls~LPLaHI~er-~~~~~~l~~G~~I~~-------~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~ 711 (1452)
T PTZ00297 640 PSSFKKHLMVHFTPFAMLFNR-VFVLGLFAHGSAVAT-------VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRAN 711 (1452)
T ss_pred cCCCCCCEEEEechHHHHHHH-HHHHHHHHcCCEEEe-------CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHh
Confidence 245678999999999999884 455677899999863 378899999999999999999999997754311000
Q ss_pred c------------------------cCC----------------CCceeEEEEec--CCCCHHHHHHHHHHhCCCCccee
Q 004034 504 T------------------------RYS----------------RKSLRVLGSVG--EPINPSAWRWFFNVVGDSRCPIS 541 (778)
Q Consensus 504 ~------------------------~~~----------------l~sLr~v~~gG--e~l~~~~~~~~~~~~g~~~~~i~ 541 (778)
. +.. =..+|.+++|| ++++..+.. .+++.
T Consensus 712 ~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~---------~i~i~ 782 (1452)
T PTZ00297 712 ERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE---------HISVC 782 (1452)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC---------CceEE
Confidence 0 000 03688888887 355544322 26688
Q ss_pred cccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC
Q 004034 542 DTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK 621 (778)
Q Consensus 542 ~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~ 621 (778)
.+||.||+. +.+.++. .. ..|.|+|+++++|.|.....-. +..|||++++ ++|++.|.+.+
T Consensus 783 ~g~glTE~~---~~~~~~~--~~--~~G~PlpgvEvKI~~~~E~~~~-~~~GEIlvr~---------~kdpe~T~e~~-- 843 (1452)
T PTZ00297 783 YVPCLREVF---FLPSEGV--FC--VDGTPAPSLQVDLEPFDEPSDG-AGIGQLVLAK---------KGEPRRTLPIA-- 843 (1452)
T ss_pred EecceEEee---eecCCCC--cc--cCCeecCceEEEEcccccccCC-CCCCeEEEEE---------CCChHHHHHhh--
Confidence 899999953 2233322 12 2399999999999863111011 1359999965 47888887631
Q ss_pred CCCCeEEcCcEEEEecCCeEEEEeecCCEEEeC-ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCC
Q 004034 622 PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV 700 (778)
Q Consensus 622 ~~~G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~-G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~ 700 (778)
+||+ +||+|.|+||++|+||.+ |+.|.|..||+.+.++|.|.+++|+|... ..++|+|+++...
T Consensus 844 --~gW~---------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~----k~lvALVvpd~e~ 908 (1452)
T PTZ00297 844 --AQWK---------RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPS----RPIIAIVSPNRDT 908 (1452)
T ss_pred --CcCc---------cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCC----CceEEEEEeCHHH
Confidence 4564 799999999999999997 99999999999999999999999997543 2389999886311
Q ss_pred C--------------------CCHHHHH----HHHHHH---Hh--hcCCCccccEEEECC-CC-----CCCCCCcccHHH
Q 004034 701 P--------------------YSEELRK----SLVLAV---RK--QIGAFAAPDKIHWAP-GL-----PKTRSGKIMRRI 745 (778)
Q Consensus 701 ~--------------------~~~~l~~----~l~~~l---~~--~Lp~~~~P~~i~~v~-~l-----P~T~sGKi~R~~ 745 (778)
- ..+++.+ .+++.+ .+ .+..+.+++.|++++ +| -+|++.|+.|+.
T Consensus 909 l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~ 988 (1452)
T PTZ00297 909 VEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDA 988 (1452)
T ss_pred HHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHH
Confidence 0 0122211 233332 21 256678888777764 55 479999999999
Q ss_pred HHHHHhcccCcCCC
Q 004034 746 LRKIASRQLDELGD 759 (778)
Q Consensus 746 L~~~~~~~~~~~~~ 759 (778)
+.+.+..+++++++
T Consensus 989 I~~kY~~~Ie~LY~ 1002 (1452)
T PTZ00297 989 VHSYFSSVIERFYS 1002 (1452)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999988877664
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=7.2e-40 Score=360.53 Aligned_cols=290 Identities=22% Similarity=0.297 Sum_probs=232.5
Q ss_pred CCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCC--CcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCC
Q 004034 387 EDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKP--SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGA 464 (778)
Q Consensus 387 ~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~ 464 (778)
++.++|+|||||||.||||+++|+++.. ....+...+++.. .|++++.+|++|+.++.+.++.++..|+++++...
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~- 172 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLS-EAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA- 172 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHH-HHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC-
Confidence 5588999999999999999999999544 3444455566644 46899999999998887888889999999998753
Q ss_pred CCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceeccc
Q 004034 465 PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTW 544 (778)
Q Consensus 465 ~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~Y 544 (778)
+++..+++.++.+ |++.++|++++.|.+.. .+++++|. ++||+++++++++.+.+. +. ..+++.|
T Consensus 173 ---~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~------~~l~slr~-i~gGa~l~~~l~~~~~~~-g~--~~v~~~Y 237 (386)
T TIGR02372 173 ---APASGIMRHARPG--DLIVGTPFIWEQLADLD------YRLPGVVG-VSSGAPSTAATWRCLLAA-GL--ARLLEVY 237 (386)
T ss_pred ---CChHHHHHhhccC--CEEEECcHHHHHHHhhC------cCCCccee-EecCCCCCHHHHHHHHHh-cc--cchhhee
Confidence 4777888887653 89999999999998753 24667876 688999999999999875 42 3689999
Q ss_pred ccccccceecccCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCC
Q 004034 545 WQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFP 624 (778)
Q Consensus 545 G~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~ 624 (778)
|+||++++.+.. .+...|+|++++++.+ | ++.. .| | .
T Consensus 238 G~TEt~~i~~~~-------~~~~~~~~~p~~~~~~-~-~~~~-----------~g--~---------------------~ 274 (386)
T TIGR02372 238 GATETGGIGLRE-------APDDPFRLLPDLACFA-D-TLSS-----------AG--L---------------------A 274 (386)
T ss_pred cccccccccccc-------CCCCCcccCCCccccC-C-CccC-----------CC--c---------------------c
Confidence 999998754321 1234567777766543 1 1110 02 1 1
Q ss_pred CeEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCH
Q 004034 625 GYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSE 704 (778)
Q Consensus 625 G~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~ 704 (778)
.|++|||+++||++|+|+|+||+||+||++|++|+|.|||++|.+||+|.+|+|+. .++++.|+|+++++... +
T Consensus 275 ~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~-~ 348 (386)
T TIGR02372 275 RRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADE-A 348 (386)
T ss_pred ceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCCh-H
Confidence 26899999999999999999999999999999999999999999999999998862 45789999998865432 3
Q ss_pred HHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCccc
Q 004034 705 ELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 742 (778)
Q Consensus 705 ~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~ 742 (778)
.+.++|+++++++|+.|++|..|+++++||+|++||++
T Consensus 349 ~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 349 ELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 35679999999999999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=6.4e-37 Score=344.31 Aligned_cols=329 Identities=18% Similarity=0.196 Sum_probs=245.4
Q ss_pred cCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 384 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 384 ~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
.+.+++++++|||||||.||+|.++|.++..+... .....+++.++|++++..++++..+.....+.++..|++++..
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 35678899999999999999999999986443222 2223468899999998777766544444456778899999877
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCccee
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~ 541 (778)
... +++.+++.|+++++|++.++|+++..|++............+||.++++||+++++..+++.+.+| ++++
T Consensus 152 ~~~----~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g---~~v~ 224 (422)
T TIGR02155 152 SGG----QTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG---MKAT 224 (422)
T ss_pred CCC----CHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC---CceE
Confidence 542 578899999999999999999999998865321111122358999999999999999999999987 7899
Q ss_pred cccccccccce-ecccCCCCCCCCCCCcCcCcC--CceEEEECC-CCceeCCCeeeEEEEecCCCcccccccCChhhhhh
Q 004034 542 DTWWQTETGGF-MITPLPGAWPQKPGSATFPFF--GVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYET 617 (778)
Q Consensus 542 ~~YG~TE~g~~-~~~~~~~~~~~~~~~~G~p~~--g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~ 617 (778)
+.||+||+++. +...+.. ...|.++. +..++|+|+ ++++++.|+.|||++++. . ..
T Consensus 225 ~~YG~tE~~~~~~~~~~~~------~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~--~------------~~ 284 (422)
T TIGR02155 225 DIYGLSEVIGPGVAMECVE------TQDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL--T------------KE 284 (422)
T ss_pred ecccchhhcCCceeecccc------cCCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC--C------------cc
Confidence 99999998532 2211110 11233433 567789994 899999999999999982 1 11
Q ss_pred hccCCCCCeEEcCcEEEEecC-C-----eEEEEeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEE
Q 004034 618 TYFKPFPGYYFTGDGCSRDKD-G-----YHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIY 691 (778)
Q Consensus 618 ~~~~~~~G~yrTGDl~~~~~d-G-----~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lv 691 (778)
. + ..+||+|||+++++++ | .+++.||.||+||++|.+|+|.|||++|.+||+|...+++.+......+.+.
T Consensus 285 ~-~--p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~ 361 (422)
T TIGR02155 285 A-L--PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELT 361 (422)
T ss_pred c-c--ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEE
Confidence 1 1 1359999999999886 4 5789999999999999999999999999999999855555565544456788
Q ss_pred EEEEEcCCCC------CCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHH
Q 004034 692 AFVTLVEGVP------YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 744 (778)
Q Consensus 692 a~Vv~~~~~~------~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~ 744 (778)
++|+..++.. ..+.+.++|++.+++.++.+.. ..|+.+++||+|. ||+.|.
T Consensus 362 ~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 362 LKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 8887764321 1133467899999999887642 2333457999988 998763
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.3e-36 Score=348.16 Aligned_cols=504 Identities=18% Similarity=0.211 Sum_probs=341.0
Q ss_pred HHHHHHHHhhhccCCCeEEEEEEcC--CCCcceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHH
Q 004034 201 ICYNCLDRNIEAGLGDKVAIYWEAN--DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (778)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~--~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l 278 (778)
+.+..+.+.+. ..|+..+..+-.. ..+.-.++||++.+..++.+|+.|...|...|+.|+++|..+.++++..++++
T Consensus 37 ~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~ 115 (1032)
T KOG1178|consen 37 TLEDSFRRELA-EAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVL 115 (1032)
T ss_pred chhhHHHHHHh-hcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehh
Confidence 35556666666 6777666554322 22446789999999999999999999999999999999999999999999999
Q ss_pred HhCCEEEeCCCCCC----HHHHHH---HHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCC
Q 004034 279 RIGAVHSVVFAGFS----SDSLAQ---RIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (778)
Q Consensus 279 ~~Gav~vpl~p~~~----~~~l~~---~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 351 (778)
++|+.+++++|.++ ++++.. .+......++. ..++++....... +... +.
T Consensus 116 ~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~-------------~l~i~~~~~~~~~---~~~s-v~------ 172 (1032)
T KOG1178|consen 116 AAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVR-------------RLNIIDILLNSLF---PKLS-VE------ 172 (1032)
T ss_pred hcceEEEEecCCCcccccchHHHhhhhhheeccceehh-------------hhhhHHHHhhccc---cccc-hh------
Confidence 99999999999999 332221 11111111110 1111111111110 0000 00
Q ss_pred ccccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcE
Q 004034 352 AMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 431 (778)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~ 431 (778)
.. .-.+. .+............-+++.+++.||||+||.||||.-+|.. +.+...|+...|....+++
T Consensus 173 ----------~~-~~~f~-~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~s-l~~~fdw~~~~f~~t~s~~ 239 (1032)
T KOG1178|consen 173 ----------TI-ADSFQ-MVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFS-LANAFDWMFTTFPPTGSDR 239 (1032)
T ss_pred ----------hc-cchhh-hhhccCCCcceeeecccccceEeecccccccccccchhHHH-HHhhhhhccccCCcCccch
Confidence 00 00000 11111222223345577899999999999999999999999 5666667777788888887
Q ss_pred EEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcc----cc---
Q 004034 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY----VT--- 504 (778)
Q Consensus 432 ~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~----~~--- 504 (778)
+-.....+++.. +....++++..+..++++.+.....+..+.+.+++++++.++.+|++.+.++...... ..
T Consensus 240 ~~~~~~~~~~d~-i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~ 318 (1032)
T KOG1178|consen 240 FTFKTSVYFDDT-IQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFS 318 (1032)
T ss_pred hhhhheeecccc-hHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhh
Confidence 644445544443 4555555555555444443333324789999999999999999999988887664421 00
Q ss_pred ----cCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCC------------CCCCCCc
Q 004034 505 ----RYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAW------------PQKPGSA 568 (778)
Q Consensus 505 ----~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~------------~~~~~~~ 568 (778)
....+.|+...++||+....++..+...+.. .-...-|+.++..+.......... +.....+
T Consensus 319 ~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~--~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~ 396 (1032)
T KOG1178|consen 319 LSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAE--IFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSII 396 (1032)
T ss_pred cccccccchhheeeeecCCccchhhhhhhhhcccc--eeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhcc
Confidence 1123479999999999999999866665432 223344888877654432111000 0000011
Q ss_pred CcCcCCceEEEECCCCceeCCCeeeEEEEecCC--CcccccccCChhhhhhhccC---CCCCeEEcCcEEEEecCCeEEE
Q 004034 569 TFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW--PGAFRTLYGDHERYETTYFK---PFPGYYFTGDGCSRDKDGYHWL 643 (778)
Q Consensus 569 G~p~~g~~~~Ivd~~g~~~~~g~~GEL~v~g~~--p~v~~gY~~~~~~~~~~~~~---~~~G~yrTGDl~~~~~dG~l~~ 643 (778)
|.+ +...+....+.+.+.++.+.....+-. ..+..| +..++++...+.. ....+|||||.++..++|.+.|
T Consensus 397 ~~~---~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~ 472 (1032)
T KOG1178|consen 397 GSL---TVLESLYRAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEI 472 (1032)
T ss_pred CCC---cceeeeeccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEE
Confidence 211 233344444555554443333322200 223334 3555655554432 1234999999999999999999
Q ss_pred EeecCCEEEeCceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCcc
Q 004034 644 TGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAA 723 (778)
Q Consensus 644 ~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~ 723 (778)
.||.|+|||+||+||+++||++++..||.|.++.+.++.+..-++.+++||+....... .+..+|++++++.|++||+
T Consensus 473 ~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~--~~~~~i~~~l~~~La~y~v 550 (1032)
T KOG1178|consen 473 SGRADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKS--VLIRDIRNYLKKELASYML 550 (1032)
T ss_pred EEeccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCc--hhHHHHHHhhcccccceec
Confidence 99999999999999999999999999999999999999998889999999999876543 3478999999999999999
Q ss_pred ccEEEECCCCCCCCCCcccHHHHHHHH
Q 004034 724 PDKIHWAPGLPKTRSGKIMRRILRKIA 750 (778)
Q Consensus 724 P~~i~~v~~lP~T~sGKi~R~~L~~~~ 750 (778)
|..++.++++|+|++||||+++|.+..
T Consensus 551 Ps~~V~l~~vPl~~~GKvDkkaL~~~~ 577 (1032)
T KOG1178|consen 551 PSLVVPLAKVPLNPNGKVDKKALLEYN 577 (1032)
T ss_pred ceEEEEhhhCCcCCCCCcChhhhhhhh
Confidence 999999999999999999999999943
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=1.3e-28 Score=277.54 Aligned_cols=329 Identities=16% Similarity=0.115 Sum_probs=218.5
Q ss_pred cCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHH--HhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 384 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK--YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 384 ~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
++.++++.|.|||||||+||+|.++|.++......... ...++.++|+++...++++..+.....++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 45678999999999999999999999986544322221 2348899999999999888776444456677889887543
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCccee
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~ 541 (778)
. .....+++|+++++|.+.++|+.+..|.+............+||.+++|||+++++..+++.+.+| ++++
T Consensus 163 ~------~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g---~~v~ 233 (445)
T TIGR03335 163 G------KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWG---CEVY 233 (445)
T ss_pred C------chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhC---CcEE
Confidence 2 224568999999999999999988777654321111112468999999999999999999998887 7899
Q ss_pred cccccccccceecccCCCCCCCCCCCcCcCc--CCceEEEECCC-CceeCCCeeeEEEEecCCCcccccccCChhhhhhh
Q 004034 542 DTWWQTETGGFMITPLPGAWPQKPGSATFPF--FGVQPVIVDEK-GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETT 618 (778)
Q Consensus 542 ~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~--~g~~~~Ivd~~-g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~ 618 (778)
+.||+||++.... +.. ..|..+ +.+.++|+|++ +.++++|+.|||+++.- .+...+....
T Consensus 234 ~~YG~TE~~~~~~--c~~-------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L--------~~~~~r~~~P 296 (445)
T TIGR03335 234 NTYGSTEGTMCGE--CQA-------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTL--------LKPGERCGSL 296 (445)
T ss_pred ecCChhhhhheEE--ecC-------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEec--------CCCCccCCce
Confidence 9999999863221 111 123333 45788999986 46689999999999981 1100001111
Q ss_pred ccCCCCCeEEcCcEEEEec-C----C----eEEEEeecCCEEEeCceeeCHHHHHHHHhcC---Cccce-EEEEEEecCC
Q 004034 619 YFKPFPGYYFTGDGCSRDK-D----G----YHWLTGRVDDVINVSGHRIGTAEVESALVSH---PQCAE-AAVVGVEHEV 685 (778)
Q Consensus 619 ~~~~~~G~yrTGDl~~~~~-d----G----~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~---p~V~e-a~Vv~~~~~~ 685 (778)
.+ -|+|||++++.. + | .+...||.||+++++|.+|+|.+||++|.++ +++.. ..++...+..
T Consensus 297 li-----RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~ 371 (445)
T TIGR03335 297 LI-----NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEE 371 (445)
T ss_pred EE-----EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCC
Confidence 11 499999999732 2 2 2555799999999999999999999999995 55542 3333222222
Q ss_pred CCeEEEEEEEEcCCCC-CCHHHHHHHHHH----HHh---hcCCCccccEEEECC--CCCCCC-CCcccH
Q 004034 686 KGQGIYAFVTLVEGVP-YSEELRKSLVLA----VRK---QIGAFAAPDKIHWAP--GLPKTR-SGKIMR 743 (778)
Q Consensus 686 ~~~~lva~Vv~~~~~~-~~~~l~~~l~~~----l~~---~Lp~~~~P~~i~~v~--~lP~T~-sGKi~R 743 (778)
....+..-|...+... ..+++.+++.+. +++ .+....+...+.+++ .||+++ .||..|
T Consensus 372 ~~~~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 372 GEITLRVSLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CCceEEEEEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 2224555555544322 113334444444 211 111122233344444 799984 688765
No 126
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=1.7e-27 Score=268.99 Aligned_cols=520 Identities=15% Similarity=0.141 Sum_probs=356.1
Q ss_pred cHHHHHHHHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCChHHHHHHHHHH
Q 004034 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACA 278 (778)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~-Gv~~Gd~Vai~~~~s~e~vva~LA~l 278 (778)
-++.++|+-+++ ++||.+|+..-+.++.+..++||++|..+|.++|.+|++. -+++||.|+++.|+++|++++++||+
T Consensus 770 ~~ile~Lq~R~a-~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cl 848 (1363)
T KOG3628|consen 770 LTILEILQWRAA-KTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACL 848 (1363)
T ss_pred HHHHHHHHHHhh-cCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHH
Confidence 367788888888 9999999999888778889999999999999999999976 47999999999999999999999999
Q ss_pred HhCCEEEeCCCCCC------HHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCc
Q 004034 279 RIGAVHSVVFAGFS------SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSA 352 (778)
Q Consensus 279 ~~Gav~vpl~p~~~------~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 352 (778)
.+|.+++|+.|-.. ...+..+++..+++.|+++.......+.-.....++. ..+..++++++...
T Consensus 849 y~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~---------s~~p~i~~~~~~~~ 919 (1363)
T KOG3628|consen 849 YLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQ---------SAIPLILVLPKLPE 919 (1363)
T ss_pred hcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhh---------hcchhhhcccccch
Confidence 99999999988533 3468899999999999998765322211111111111 11222232222110
Q ss_pred cccccccCCCCcccchhhccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEE
Q 004034 353 MTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 432 (778)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~ 432 (778)
.+.. ......+.....++....++.+||+-|.--++|.--|+.++|.+ +.++....+....+.+..-+
T Consensus 920 ------t~~k-----~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHss-lla~Ck~iKe~~~l~~~rpl 987 (1363)
T KOG3628|consen 920 ------TIRK-----RKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSS-LLAFCKIIKETCQLYKSRPL 987 (1363)
T ss_pred ------hhhh-----hhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHH-HHHHHHHHHHHHccccCCce
Confidence 0000 00011111222233445678899999999999999999999999 66778888888888888877
Q ss_pred EEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcc-----cccCC
Q 004034 433 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY-----VTRYS 507 (778)
Q Consensus 433 l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~-----~~~~~ 507 (778)
+...+..-..|+....+...+.|.+.++..+.....+|..|++.|++++|.-++.+-..++.+.+..... ....+
T Consensus 988 ~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn 1067 (1363)
T KOG3628|consen 988 LGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNN 1067 (1363)
T ss_pred EEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcc
Confidence 7777777777777777778889999888877666678999999999999999999988888887653211 11122
Q ss_pred CCceeEEEEecCCCCHHHHHHHHHHh---CCCCcceecccccccccceecccCCCCCC--------------CC------
Q 004034 508 RKSLRVLGSVGEPINPSAWRWFFNVV---GDSRCPISDTWWQTETGGFMITPLPGAWP--------------QK------ 564 (778)
Q Consensus 508 l~sLr~v~~gGe~l~~~~~~~~~~~~---g~~~~~i~~~YG~TE~g~~~~~~~~~~~~--------------~~------ 564 (778)
+++ ..++..-|.....+..-|.+.+ |...-.+...|+.--.-.++.....+..| .+
T Consensus 1068 ~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~a 1146 (1363)
T KOG3628|consen 1068 TSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGA 1146 (1363)
T ss_pred ccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCC
Confidence 222 2222233344444444444433 32212233344433222111111111000 00
Q ss_pred -----CCCcCcCcCCceEEEECC-CCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccC------C--CCCeEEcC
Q 004034 565 -----PGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK------P--FPGYYFTG 630 (778)
Q Consensus 565 -----~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~------~--~~G~yrTG 630 (778)
.-..|.-.+++++.|+++ +-.+|..|+.||||+.+ +.-+.+|++-.+.+...-|. + ..+|-|||
T Consensus 1147 p~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S--~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG 1224 (1363)
T KOG3628|consen 1147 PHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNS--AHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTG 1224 (1363)
T ss_pred CCccccccCCcccccceeEEeCCccccccccCCcceEEecc--ccccccccccCchhhhhhhhhhccccccccccceeee
Confidence 113477788999999997 55679999999999999 77777777643223322221 1 23499999
Q ss_pred cEEEEec------CC----eEEEEeecCCEEEeCceeeCHHHHHHHHh-cCCccceEEEEEEecCCCCeEEEEEEEEcCC
Q 004034 631 DGCSRDK------DG----YHWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG 699 (778)
Q Consensus 631 Dl~~~~~------dG----~l~~~GR~dd~Iki~G~rI~~~eIE~~L~-~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~ 699 (778)
|+|+... .| -||++|-.++.+.++|-|..|.+||..+. .||.|.+|+|+- ++..+|..+....
T Consensus 1225 ~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~-----~~glvVvviE~~g- 1298 (1363)
T KOG3628|consen 1225 DLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQ-----ATGLVVVVIECHG- 1298 (1363)
T ss_pred eeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEe-----eCCeEEEEEEecC-
Confidence 9999742 22 48999999999999999999999999885 699999999983 4445777777665
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCccccEEEECC--CCCCCCCCcccHHHHHHHHhc
Q 004034 700 VPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP--GLPKTRSGKIMRRILRKIASR 752 (778)
Q Consensus 700 ~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~--~lP~T~sGKi~R~~L~~~~~~ 752 (778)
.+.-.++..-|...+-+.. +.+-..+.+|+ .+|+++.|..+|..+++.+..
T Consensus 1299 q~~~~~LvPlIv~~vL~eH--~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~ 1351 (1363)
T KOG3628|consen 1299 QQELADLVPLIVNVVLEEH--YIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLA 1351 (1363)
T ss_pred chhHhhhhHHHHHHHHhhc--ceEEEEEEEecCCccccCCchhhHHHHHHHHHHh
Confidence 2222233344444443332 44555677776 599999999999999887654
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=2.1e-25 Score=227.94 Aligned_cols=223 Identities=17% Similarity=0.129 Sum_probs=163.1
Q ss_pred HHhhhccCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEE
Q 004034 207 DRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIGAVHS 285 (778)
Q Consensus 207 ~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~v 285 (778)
+.+++ ++|+++|+++.++..++.+++||+||.++++++|+.|++ +|+++||+|+|+++|++++++++|||+++|++++
T Consensus 3 ~~~~~-~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 3 SPLLA-ADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhh-hCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 34555 799999999753321135689999999999999999998 7999999999999999999999999999999999
Q ss_pred eCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcc
Q 004034 286 VVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRD 365 (778)
Q Consensus 286 pl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 365 (778)
|++ +++++++|++++...... . . +.++.+............. ....
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~--------------~----~--~~~~~~~~~~~~~~~~~~~-~~~~ 127 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAA--------------G----S--GEVVALSLDPLGRRVAGEL-PPGV 127 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcc--------------c----C--CceEEEeccccccCCCCCC-CCcc
Confidence 995 789999999876532100 0 1 1223221100000000000 1112
Q ss_pred cchhhccCCCCCCCCcc-ccCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhh
Q 004034 366 IWWQDVVPKYPTKCEVE-WVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGH 444 (778)
Q Consensus 366 ~~~~~~l~~~~~~~~~~-~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~ 444 (778)
..|.+.+........+. ...++|++.|+||||+ +|++++.+. ...++.++|+++ .+|++|..|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~-----~~~~l~~~D~~l-~~Pl~H~~gl 192 (227)
T TIGR03089 128 IDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA-----RAAGLPPGDRVL-VLAWTDLEDF 192 (227)
T ss_pred cchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH-----hhcCCCCCCeEE-ecCCCchHHH
Confidence 34555444322222222 4567999999999985 666655443 457889999999 9999999998
Q ss_pred hHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCcc
Q 004034 445 SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (778)
Q Consensus 445 ~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT 483 (778)
...++.+|..|+++|+++ .++++.+++.|+++|||
T Consensus 193 ~~~~~~~l~~G~t~v~~~----rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 193 LATLLAPLAAGGSLVLVT----HPDPARLDQIAETERVT 227 (227)
T ss_pred HHHHHHHhccCceEEEec----CCCHHHHHHHHHhhcCC
Confidence 788999999999999984 36999999999999997
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.93 E-value=2.3e-23 Score=224.03 Aligned_cols=327 Identities=21% Similarity=0.211 Sum_probs=232.6
Q ss_pred cCCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 384 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 384 ~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
++-++...|--||||||+|+-+..++..+..+... ..-...+...+|++......+..+|....-+++--.|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 34466677889999999999999998874433222 2223457788999888777776666544445555567776655
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCccee
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~ 541 (778)
.+ -+.++.+++++.+++|++.++|+.+..|.+..........-.+||.+++|+|+++++..+.+.+.+| +.++
T Consensus 167 ~~----g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g---~~~~ 239 (438)
T COG1541 167 SG----GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG---CKAF 239 (438)
T ss_pred CC----ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC---Ccee
Confidence 43 2668899999999999999999999999887543211234468999999999999999999999998 7889
Q ss_pred cccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECC-CCceeCCCeeeEEEEecCCCcccccccCChhhhhhhcc
Q 004034 542 DTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYF 620 (778)
Q Consensus 542 ~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~ 620 (778)
+.||.||..+.....+.. .. -.-.+-+...+.|+|+ +|++++.|+.|||+++. + ++ .....+
T Consensus 240 diYGltE~~g~g~~eC~~----~~-glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~----L-----~~---~~~PlI 302 (438)
T COG1541 240 DIYGLTEGFGPGAGECTE----RN-GLHIWEDHFIFEIVDPETGEQLPDGERGELVITT----L-----TK---EGMPLI 302 (438)
T ss_pred eccccccccCCccccccc----cc-CCCcchhhceeeeecCCcCccCCCCCeeEEEEEe----c-----cc---cCcceE
Confidence 999999997653111111 11 1222445677889996 89999999999999988 1 11 111111
Q ss_pred CCCCCeEEcCcEEEEecC----Ce-----EEEEeecCCEEEeCceeeCHHHHHHHHhcCCccc-eEEEEEEecCCCCeEE
Q 004034 621 KPFPGYYFTGDGCSRDKD----GY-----HWLTGRVDDVINVSGHRIGTAEVESALVSHPQCA-EAAVVGVEHEVKGQGI 690 (778)
Q Consensus 621 ~~~~G~yrTGDl~~~~~d----G~-----l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~p~V~-ea~Vv~~~~~~~~~~l 690 (778)
-|+|||+.++.++ |. ..+.||.||+++++|.+|.|..||++|.+.+.+. +-.++... +.....+
T Consensus 303 -----RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L 376 (438)
T COG1541 303 -----RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDEL 376 (438)
T ss_pred -----EEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceE
Confidence 4999999999874 32 5699999999999999999999999999999999 55555444 4445678
Q ss_pred EEEEEEcCCCCCCHHH---HHHHHHHHHhhcCCCccccEEEECCCCCCCCCCccc
Q 004034 691 YAFVTLVEGVPYSEEL---RKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 742 (778)
Q Consensus 691 va~Vv~~~~~~~~~~l---~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~ 742 (778)
.+-|+..++....... .++|...++..++. .+-..++.+..+|+|.. |..
T Consensus 377 ~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~v~~v~~g~l~r~~~-K~k 429 (438)
T COG1541 377 TVRVELENEAEELEDERRLAKKLIKNIKSELGV-RVEVELVEPGELPRTEG-KAK 429 (438)
T ss_pred EEEEEecCcccchHHHHHHHHHHHHHHHhhcCC-ceEEEEEeccceecccC-cee
Confidence 8888877542222222 24566666665542 22223555568999975 643
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1.8e-23 Score=225.65 Aligned_cols=140 Identities=27% Similarity=0.345 Sum_probs=123.9
Q ss_pred CCCeEEcCcEEEE-ecCCeEEEEeecCCEEEeCc---eeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcC
Q 004034 623 FPGYYFTGDGCSR-DKDGYHWLTGRVDDVINVSG---HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE 698 (778)
Q Consensus 623 ~~G~yrTGDl~~~-~~dG~l~~~GR~dd~Iki~G---~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~ 698 (778)
.+|||+|||+|++ |+||+|+|+||.| +| ++|+|. ||++|.+||+|.||+|++++++..|+.++|||++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 3789999999998 6999999999998 88 799999 999999999999999999999999999999999874
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCccccEEEECCCCCCCCCCcccHHHHHHHHhcccCcCCCC-CCCCChhhHHHHHh
Q 004034 699 GVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDT-STLADPGVVDQLIA 774 (778)
Q Consensus 699 ~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 774 (778)
. .+ .++|+++++++|+. ++|+.|+++++||+|++|||+|+.|+++..++.+.++|+ +++++...++.+.+
T Consensus 281 ~--~~---~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 351 (365)
T PRK09188 281 P--AD---EKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQIDELDDLLREPEIRGLVEAIAA 351 (365)
T ss_pred C--CC---HHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhcccccccccccChhHHHHHHHHHH
Confidence 2 22 57899999999999 999999999999999999999999999998887777777 55555555555544
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.75 E-value=2.5e-16 Score=179.46 Aligned_cols=492 Identities=16% Similarity=0.156 Sum_probs=314.3
Q ss_pred cCCCeEEEEEEcCCCCcceeecHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEeCCC--hHHHHHHHHHHHhCCEEEeCCC
Q 004034 213 GLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLAN-YLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVFA 289 (778)
Q Consensus 213 ~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~-~L~~~Gv~~Gd~Vai~~~~s--~e~vva~LA~l~~Gav~vpl~p 289 (778)
+.+..+|.++-+..+. ...+||..+..++.+.|+ .|.+.|++++|+|.++...+ .|+++..++|...|.+.+|+++
T Consensus 106 hs~~~ta~i~id~kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e 184 (1363)
T KOG3628|consen 106 HSATSTAHICIDKKGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSE 184 (1363)
T ss_pred CCCCCceEEEEcCCCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchh
Confidence 7888999999877744 889999999999999999 77788999999999999665 7999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEEccCCccccccccCCCCcccchh
Q 004034 290 GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQ 369 (778)
Q Consensus 290 ~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 369 (778)
..+.+++..+++....+++++.....+.............+++.. ... ++.
T Consensus 185 ~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w--------------~t~---------------~~k 235 (1363)
T KOG3628|consen 185 LSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWW--------------KTN---------------DFK 235 (1363)
T ss_pred hhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhh--------------hcc---------------ccc
Confidence 999999999999999999999876543111100000011111110 000 000
Q ss_pred hccCCCCCCCCccccCCCCcEEEEeCCCCCCCCceEEEccchHHHH--------------HHHHH-----HHhhCCCCCc
Q 004034 370 DVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH--------------TATTF-----KYAFDYKPSD 430 (778)
Q Consensus 370 ~~l~~~~~~~~~~~~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~--------------~~~~~-----~~~~~~~~~d 430 (778)
-.........|...+ . ..||-||++++|.--|++.+|+ ++.. ...++ ...+.....+
T Consensus 236 ~~~~~~k~~~P~~~~--~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~ 311 (1363)
T KOG3628|consen 236 GNYTKDKIKKPRMQL--P-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSED 311 (1363)
T ss_pred ceeehhhccCCceee--e-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCccc
Confidence 000000111122222 2 7899999999999999999998 3322 11112 2234455567
Q ss_pred EEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcc--------
Q 004034 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY-------- 502 (778)
Q Consensus 431 ~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~-------- 502 (778)
.++......--.|++..++.+|++|.|.+.++.. ....|..+.+++.+++.+++.+--..+......-.+.
T Consensus 312 ~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~-~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~ 390 (1363)
T KOG3628|consen 312 VLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKE-VLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFK 390 (1363)
T ss_pred ceeeccCcccccchhhhhhhhhhcCceeecCchh-hcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchh
Confidence 7777777666677777889999999999998764 3447788999999999999877655444443221110
Q ss_pred -cccCCCCceeEEEEecCCCCHHHHHHHHHH----hCCCCcceeccccc-----------------ccccceecccCCCC
Q 004034 503 -VTRYSRKSLRVLGSVGEPINPSAWRWFFNV----VGDSRCPISDTWWQ-----------------TETGGFMITPLPGA 560 (778)
Q Consensus 503 -~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~----~g~~~~~i~~~YG~-----------------TE~g~~~~~~~~~~ 560 (778)
-+..++++||.+++..+.+..+..+..... +|... .-..|-+ +|++..... .++.
T Consensus 391 k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~--~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r-~p~~ 467 (1363)
T KOG3628|consen 391 KYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETN--VKVVDFPILCLLWHGGIPISFKDWMEIGTVSIR-RPEQ 467 (1363)
T ss_pred hccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcC--cceeechhhhhhhcCceEEEeccchhhhccccc-Cccc
Confidence 112468899999999999988765433222 22111 1111211 333332221 1110
Q ss_pred ----C-------------------------CCCCCCcCcCcCC-ceEEEECC-CCceeCCCeeeEEEEecCCCccccccc
Q 004034 561 ----W-------------------------PQKPGSATFPFFG-VQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLY 609 (778)
Q Consensus 561 ----~-------------------------~~~~~~~G~p~~g-~~~~Ivd~-~g~~~~~g~~GEL~v~g~~p~v~~gY~ 609 (778)
. ...+...|+-.++ +.+.|+++ ..+.|..++.|||||.+ +.+..+||
T Consensus 468 ~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS--~~~~~~~~ 545 (1363)
T KOG3628|consen 468 MADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSS--NSLGKLFY 545 (1363)
T ss_pred ccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEec--CCccccee
Confidence 0 0011234554444 45556665 56779999999999999 89999999
Q ss_pred CChhhhhhhccC-------CCCC---eEEcCcEEEEecCCeEEEEeecCCEEEeCceeeCHHHH----------HHHHhc
Q 004034 610 GDHERYETTYFK-------PFPG---YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEV----------ESALVS 669 (778)
Q Consensus 610 ~~~~~~~~~~~~-------~~~G---~yrTGDl~~~~~dG~l~~~GR~dd~Iki~G~rI~~~eI----------E~~L~~ 669 (778)
.-+..+...|-. ..++ +.|||=+|++.+++-+.+.++.|....++|.+....+| +.+.+.
T Consensus 546 al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~ 625 (1363)
T KOG3628|consen 546 ALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRG 625 (1363)
T ss_pred eccccccceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhc
Confidence 866444444321 1122 88999999998666555555555555678888876664 334445
Q ss_pred CCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHH--HHHHHHHHHh--hcCCCccccEEEECCCCCCCCCCcccHHH
Q 004034 670 HPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEEL--RKSLVLAVRK--QIGAFAAPDKIHWAPGLPKTRSGKIMRRI 745 (778)
Q Consensus 670 ~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l--~~~l~~~l~~--~Lp~~~~P~~i~~v~~lP~T~sGKi~R~~ 745 (778)
.+.|-++.++- .++++..++-.+.....+.+ ..++.+.+.. ++..|-+ .++..+.||||+-|-|.-..
T Consensus 626 v~~VF~~saf~------~E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCi--livP~~tLPrt~~~Gi~~~~ 697 (1363)
T KOG3628|consen 626 VIAVFDVSAFE------DEHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCI--LIVPANTLPRTPLGGIHNNE 697 (1363)
T ss_pred cceEEEEeeee------cceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEE--EEeccccCCCccccccccHH
Confidence 56777777763 45566666555443211111 2233332322 2332322 25555689999987799999
Q ss_pred HHHHHhc
Q 004034 746 LRKIASR 752 (778)
Q Consensus 746 L~~~~~~ 752 (778)
+++.|.+
T Consensus 698 ~k~~F~~ 704 (1363)
T KOG3628|consen 698 CKQAFLE 704 (1363)
T ss_pred HHHHHHc
Confidence 9998864
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.70 E-value=4.2e-15 Score=164.54 Aligned_cols=257 Identities=15% Similarity=0.111 Sum_probs=163.8
Q ss_pred cEEEEeCCCCCCCCceEEEccchHHHHHHHHHHHh--hCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcE-EEEEcCCC
Q 004034 389 PLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA--FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGAS-VVVFEGAP 465 (778)
Q Consensus 389 ~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~t-lvl~~~~~ 465 (778)
-..+..||||||+|-.++.+......+....+... .++..++++..+. |..+ .++..+.+... +-.++-
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~---~ly~~~~~~~~~~~~~~l-- 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADN---NLYQSVNNRWISLDFFDL-- 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccCh---hHHHHHHhccceeeecCC--
Confidence 34577899999999999999887543332222221 2455566655542 1111 12233333221 233322
Q ss_pred CCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccc
Q 004034 466 TYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWW 545 (778)
Q Consensus 466 ~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG 545 (778)
..+.+.+++.|++++++++.+.|+.+..|.+...+ ...+ ..++.++++||.++++..+.+.+.|| +++++.||
T Consensus 173 -~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~--~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg---~~V~~~YG 245 (430)
T TIGR02304 173 -LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVME--GELT-IKPKKVISVAEVLEPQDRELIRNVFK---NTVHQIYQ 245 (430)
T ss_pred -CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHh--cCCC-CCceEEEEccCCCCHHHHHHHHHHhC---CCeeEccC
Confidence 14678999999999999999999999999886432 1112 47999999999999999999999998 78999999
Q ss_pred cccccceecccCCCCCCCCCCCcCcCcCCceEE--EECCCCceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCC
Q 004034 546 QTETGGFMITPLPGAWPQKPGSATFPFFGVQPV--IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 623 (778)
Q Consensus 546 ~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~--Ivd~~g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~ 623 (778)
+|| |.+.. .+.. +..-.--..+-++ ++|+++++ +.+|++ +.|.. ..++
T Consensus 246 ~tE-g~la~-eC~~------g~lHl~ed~~~vE~~ivD~~~~~-------~~ViT~--------L~n~~----~PlI--- 295 (430)
T TIGR02304 246 ATE-GFLAS-TCRC------GTLHLNEDLVHIEKQYLDEHKRF-------VPIITD--------FTRTT----QPIV--- 295 (430)
T ss_pred Cch-hheEE-ecCC------CCEEEccccEEEEeeEECCCCce-------EEEEec--------CCCcc----ceEE---
Confidence 999 54322 1111 1110011122333 77876643 346666 12211 1111
Q ss_pred CCeEEcCcEEEEecC----Ce----E-EEEeecCCEEEe---Cce--eeCHHHHHHHHh-cCCccceEEEEEEecCCCCe
Q 004034 624 PGYYFTGDGCSRDKD----GY----H-WLTGRVDDVINV---SGH--RIGTAEVESALV-SHPQCAEAAVVGVEHEVKGQ 688 (778)
Q Consensus 624 ~G~yrTGDl~~~~~d----G~----l-~~~GR~dd~Iki---~G~--rI~~~eIE~~L~-~~p~V~ea~Vv~~~~~~~~~ 688 (778)
-|+|||++++.++ |. | .+.||.||++++ +|. .|.|..|+.+|. ..++|.+..++-. ...
T Consensus 296 --RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~----~~~ 369 (430)
T TIGR02304 296 --RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQT----GSA 369 (430)
T ss_pred --eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEc----cCC
Confidence 3999999998654 32 3 488999999996 254 459999998855 5789999877732 123
Q ss_pred EEEEEEEE
Q 004034 689 GIYAFVTL 696 (778)
Q Consensus 689 ~lva~Vv~ 696 (778)
.+...++.
T Consensus 370 ~l~v~~~~ 377 (430)
T TIGR02304 370 QLELIADC 377 (430)
T ss_pred eEEEEEEe
Confidence 45555554
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.42 E-value=4e-13 Score=111.43 Aligned_cols=70 Identities=40% Similarity=0.550 Sum_probs=62.4
Q ss_pred HHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccc--cEEEECCC-CCCCCC
Q 004034 662 EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAP--DKIHWAPG-LPKTRS 738 (778)
Q Consensus 662 eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P--~~i~~v~~-lP~T~s 738 (778)
|||++|.+||+|.||+|++++++..|+.++|||++ ..++|+++++++||+|++| ..++.+++ ||+|+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~---------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~ 71 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL---------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPS 71 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE---------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETT
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe---------eecccccchhhhCCCcceeeEEEEccccCcCCCCCC
Confidence 89999999999999999999999889999999998 1489999999999999999 56666677 999999
Q ss_pred Cc
Q 004034 739 GK 740 (778)
Q Consensus 739 GK 740 (778)
||
T Consensus 72 GK 73 (73)
T PF13193_consen 72 GK 73 (73)
T ss_dssp SS
T ss_pred CC
Confidence 98
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.80 E-value=3.2e-07 Score=99.79 Aligned_cols=242 Identities=16% Similarity=0.139 Sum_probs=136.1
Q ss_pred cCCCCcEEEEeCCCCCCCCceEEEccchHHHH---HHHHHHHhhCCCC-CcEEEEeCCcchhhhhh----HHHHHHHhcC
Q 004034 384 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH---TATTFKYAFDYKP-SDVYWCTADCGWITGHS----YVTYGPMLNG 455 (778)
Q Consensus 384 ~~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~---~~~~~~~~~~~~~-~d~~l~~~~~~~~~g~~----~~i~~~L~~G 455 (778)
.+++++..++-||||||.|--+.+.+...... ....+....+... .-.++...|-......+ ......++.+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 34567778899999999986666655442211 1222222222222 12333333322211111 1222334445
Q ss_pred cEEEEEcCCCCCCChhHHHHHHH----HhCccEEEecHHHHHHHHhcCCcccccCCCC-ceeEEEEec------CCCCH-
Q 004034 456 ASVVVFEGAPTYPDSGRSWDIVD----KYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK-SLRVLGSVG------EPINP- 523 (778)
Q Consensus 456 ~tlvl~~~~~~~~~~~~~~~~i~----~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~-sLr~v~~gG------e~l~~- 523 (778)
.. .+.++. ..+.+.+++.+. +.+...+++.|.++..++....+......++ ..+.+-.|| |.++.
T Consensus 166 ~~-~~l~~~--~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ 242 (365)
T PF04443_consen 166 SR-FALDND--ELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSRE 242 (365)
T ss_pred ce-eeecCC--ccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHH
Confidence 55 333322 246676666664 3456778888887666654433222233444 345555555 45765
Q ss_pred HHHHHHHHHhCC-CCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceEEEECC-CCceeCCCeeeEEEEecCC
Q 004034 524 SAWRWFFNVVGD-SRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSW 601 (778)
Q Consensus 524 ~~~~~~~~~~g~-~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~~Ivd~-~g~~~~~g~~GEL~v~g~~ 601 (778)
+..+.+.+.+|. ..-.+++.||+||.....+..-.+ -.+.|-. +.|.|+ +.++++.|++|-|.+-.+.
T Consensus 243 ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~---------~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~ 312 (365)
T PF04443_consen 243 EFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG---------HFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLA 312 (365)
T ss_pred HHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCC---------cccCCCe-EEEECCCCCcCCCCCCeeEEEEEccc
Confidence 455667777884 345799999999977543321111 1123333 667787 6789999999999987732
Q ss_pred CcccccccCChhhhhhhccCCCCCeEEcCcEEEEecC--------CeEEEEeecCCEEEeCcee
Q 004034 602 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKD--------GYHWLTGRVDDVINVSGHR 657 (778)
Q Consensus 602 p~v~~gY~~~~~~~~~~~~~~~~G~yrTGDl~~~~~d--------G~l~~~GR~dd~Iki~G~r 657 (778)
+ . ..++..-|.|+|.+..+ .++.++||.+. -.+||-.
T Consensus 313 ~---~---------------s~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~-ae~RGCs 357 (365)
T PF04443_consen 313 N---T---------------SYPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG-AEIRGCS 357 (365)
T ss_pred c---c---------------CCCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC-CccCCcH
Confidence 1 0 12455779999988654 27999999874 2344433
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.46 E-value=2.1e-06 Score=98.68 Aligned_cols=161 Identities=17% Similarity=0.099 Sum_probs=95.7
Q ss_pred CCceeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcCcCCceE-EEE--CCC-
Q 004034 508 RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQP-VIV--DEK- 583 (778)
Q Consensus 508 l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p~~g~~~-~Iv--d~~- 583 (778)
++.|+.|.+.+..-...-...+++.+|. -..+...|++||.- +.+ +... . ...+..+++... +.+ ++.
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~-~~~~~~~y~ASEg~-i~i-~~~~---~--~~~~~l~~~~~ffEFip~~~~~ 337 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGG-VPIQSKGYGASEGF-IGI-PLDP---E--DPGYVLAPDSGFFEFIPVDEDE 337 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTT-S-EEE-EEEETTEE-EEE-ES-C---C--C--EEE-TTSSEEEEEE-STT-
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCC-CceeeccccccceE-EEE-ecCC---C--CCceEeecCCeEEEEEeccCCc
Confidence 6899988877766666777788888885 24467899999953 322 2210 0 112223333221 122 221
Q ss_pred ------C-----ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCC--eEEcCcEEEEec--CC--eEEEEee
Q 004034 584 ------G-----VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRDK--DG--YHWLTGR 646 (778)
Q Consensus 584 ------g-----~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G--~yrTGDl~~~~~--dG--~l~~~GR 646 (778)
. .++..|+..||+|+.. .| -|+.||++++.. ++ .|.|+||
T Consensus 338 ~~~~~~~~~l~~~ele~G~~YelviTt~-----------------------~GLyRY~iGDvVrv~gf~~~~P~i~F~~R 394 (528)
T PF03321_consen 338 QNPSEQPKTLLLHELEVGEEYELVITTN-----------------------SGLYRYRIGDVVRVTGFYNQTPRIEFVGR 394 (528)
T ss_dssp ------SSSEEGGG--TT-EEEEEEEST-----------------------TS-SSEEECEEEEEEEEETTEEEEEEEEE
T ss_pred ccccCCCceecHHHhcCCCeEEEEEecc-----------------------cceeeeecCCEEEEeeccCCCcEEEEecc
Confidence 1 2366888999999872 23 399999999864 45 7999999
Q ss_pred cCCEEEeCceeeCHHHHHHHHhcC-----CccceEEEEEEecCCCCeEEEEEEEEcCC
Q 004034 647 VDDVINVSGHRIGTAEVESALVSH-----PQCAEAAVVGVEHEVKGQGIYAFVTLVEG 699 (778)
Q Consensus 647 ~dd~Iki~G~rI~~~eIE~~L~~~-----p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~ 699 (778)
.+.++.+.|+++.-.+|+++|.+. -.+.+.++...........-+.|+.+...
T Consensus 395 ~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 395 RGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp TTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred CCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 999999999999999999999864 34556666544222344566777777654
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.66 E-value=0.0079 Score=69.79 Aligned_cols=131 Identities=16% Similarity=0.144 Sum_probs=80.9
Q ss_pred CCc---eeEEEEecCCCCHHHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCcC-cC-CceEEEE--
Q 004034 508 RKS---LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFP-FF-GVQPVIV-- 580 (778)
Q Consensus 508 l~s---Lr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~~~~~~~~~~~~~~G~p-~~-g~~~~Iv-- 580 (778)
++. +..+..||-. .-...+...+|. -..+...|++||.- +.+ +..... .+...+.- ++ +.-.+.+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~-~~~~~~~Y~ASEg~-~gi-~~~~~~--~p~~~~~~l~~~~~ffEFiP~ 372 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGG-LPMASTIYASSESY-FGI-NLNPMC--KPSEVSYTIMPNMAYFEFLPH 372 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCC-CccccccccccceE-EEe-ecCCCC--CCCCcceEecCCcEEEEeeec
Confidence 456 5566666644 444555555553 24578999999953 222 211000 01111111 11 2222222
Q ss_pred CCCC------------ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCC--eEEcCcEEEEecC----CeEE
Q 004034 581 DEKG------------VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRDKD----GYHW 642 (778)
Q Consensus 581 d~~g------------~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G--~yrTGDl~~~~~d----G~l~ 642 (778)
|+.+ ..|..|+.-||+|+. ..| -|+.||.+++..- -.|.
T Consensus 373 ~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT-----------------------~~GLyRY~iGDvVrvtgf~~~~P~i~ 429 (597)
T PLN02249 373 NHDGDGALDETSLVELADVEVGKEYELVITT-----------------------YAGLYRYRVGDILRVTGFHNSAPQFK 429 (597)
T ss_pred ccCCcccCCCCcEecHHHcCCCCeEEEEEEc-----------------------ccceeEeecCCEEEEeeccCCCcEEE
Confidence 2211 235678888999877 134 3889999998642 3699
Q ss_pred EEeecCCEEEeCceeeCHHHHHHHHhc
Q 004034 643 LTGRVDDVINVSGHRIGTAEVESALVS 669 (778)
Q Consensus 643 ~~GR~dd~Iki~G~rI~~~eIE~~L~~ 669 (778)
|+||.+.++.+.|.++.-.+++.+|.+
T Consensus 430 F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 430 FIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred EEccCCcceecccccCCHHHHHHHHHH
Confidence 999999999999999999999998877
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.61 E-value=0.0046 Score=71.19 Aligned_cols=135 Identities=13% Similarity=0.079 Sum_probs=84.4
Q ss_pred CCCceeEEEEecCCCCHHHHHHHHHHhCCCCccee-cccccccccceecccCCCCCCCCCCC-cCcCcCCceEE-EE--C
Q 004034 507 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPGAWPQKPGS-ATFPFFGVQPV-IV--D 581 (778)
Q Consensus 507 ~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i~-~~YG~TE~g~~~~~~~~~~~~~~~~~-~G~p~~g~~~~-Iv--d 581 (778)
-++.+++|.+.-..-...-...+....| +++++ ..|++||+-+ .+ +.... ..+.. ....+|+.... .+ |
T Consensus 291 LWP~lk~I~~~~tGsm~~Y~~~L~~y~g--glpl~s~~Y~sSE~~~-gi-nl~p~--~~p~~~sy~L~p~~~yFEFip~~ 364 (606)
T PLN02247 291 LWPRTKYIEVIVTGSMAQYIPTLEFYSG--GLPLVSTMYASSECYF-GI-NLKPL--SDPSDVSYTLLPNMAYFEFLPVD 364 (606)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcC--CCceecccccccceEE-Ee-ccCcC--CCccCCceeecCCcEEEEEeecC
Confidence 3577888877665555666666665555 46655 5899999542 22 22110 01111 12222332221 12 2
Q ss_pred CC----------------------------CceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCC--eEEcCc
Q 004034 582 EK----------------------------GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGD 631 (778)
Q Consensus 582 ~~----------------------------g~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G--~yrTGD 631 (778)
+. ...+..|+.-||+|+. +.| -||.||
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt-----------------------~~GLYRYrlGD 421 (606)
T PLN02247 365 KNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTT-----------------------FTGLYRYRVGD 421 (606)
T ss_pred CCcccccccccccccccccccccccCceecHHHccCCCeEEEEEEe-----------------------cCceEEEecCC
Confidence 11 1135678888888876 134 488999
Q ss_pred EEEEe----cCCeEEEEeecCCEEEeCceeeCHHHHHHHHhcC
Q 004034 632 GCSRD----KDGYHWLTGRVDDVINVSGHRIGTAEVESALVSH 670 (778)
Q Consensus 632 l~~~~----~dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~ 670 (778)
++++. .--.|.|++|.+.+..+.|.+..-.++-.++.+.
T Consensus 422 vv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 422 ILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 99974 3356999999999999999999999998888753
No 137
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.55 E-value=0.00062 Score=59.44 Aligned_cols=85 Identities=21% Similarity=0.336 Sum_probs=56.5
Q ss_pred ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCC----CHHHHHHHHHHHHhhcCCCccccEEEEC
Q 004034 655 GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY----SEELRKSLVLAVRKQIGAFAAPDKIHWA 730 (778)
Q Consensus 655 G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~----~~~l~~~l~~~l~~~Lp~~~~P~~i~~v 730 (778)
|.+|+|..||++|.++|++.....+.+........+...|...++... .+++.++|.+.|++.|.- .| .+.++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv--~~-~V~lv 77 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV--RP-EVELV 77 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc--eE-EEEEE
Confidence 789999999999999999994444334444456778888888876532 256788899999998863 23 44444
Q ss_pred --CCCCCCCCCcccH
Q 004034 731 --PGLPKTRSGKIMR 743 (778)
Q Consensus 731 --~~lP~T~sGKi~R 743 (778)
..||++ .||..|
T Consensus 78 ~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 78 PPGTLPRS-EGKAKR 91 (96)
T ss_dssp -TT-S----SSSS-S
T ss_pred CCCCccCC-CCcceE
Confidence 579998 578654
No 138
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.40 E-value=0.046 Score=63.01 Aligned_cols=135 Identities=11% Similarity=0.063 Sum_probs=83.4
Q ss_pred CCCceeEEEEecCCCCHHHHHHHHHHhCCCCcce-ecccccccccceecccCCCCCCCCCCCc-CcCcCCceEE-EE--C
Q 004034 507 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPI-SDTWWQTETGGFMITPLPGAWPQKPGSA-TFPFFGVQPV-IV--D 581 (778)
Q Consensus 507 ~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~i-~~~YG~TE~g~~~~~~~~~~~~~~~~~~-G~p~~g~~~~-Iv--d 581 (778)
-++.+++|-+....-...-...+....| ++++ -..|++||+-. .+ +.... ..+... ...+|+.... .+ |
T Consensus 302 LWP~lk~I~~~~tGsm~~Y~p~L~~y~g--glpl~~~~Y~ASE~~~-gi-nl~P~--~~p~~~sy~L~p~~~yFEFip~~ 375 (612)
T PLN02620 302 LWPNTKYVDVIVTGTMSQYIPTLDYYSN--GLPLVCTMYASSECYF-GV-NLNPL--CKPSEVSYTLIPTMAYFEFLPVH 375 (612)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcC--CCccccccccccceEE-Ee-ccCCC--CCcccceeeecCCcEEEEEeecc
Confidence 3577888777666555555566655444 4554 57799999542 22 22111 011111 2222333222 11 1
Q ss_pred C-C-----------------C-----ceeCCCeeeEEEEecCCCcccccccCChhhhhhhccCCCCC--eEEcCcEEEEe
Q 004034 582 E-K-----------------G-----VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRD 636 (778)
Q Consensus 582 ~-~-----------------g-----~~~~~g~~GEL~v~g~~p~v~~gY~~~~~~~~~~~~~~~~G--~yrTGDl~~~~ 636 (778)
+ + + ..+..|+.-||+|+. +.| -||.||++++.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt-----------------------~~GLyRYrlGDvv~V~ 432 (612)
T PLN02620 376 RNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTT-----------------------YAGLYRYRVGDVLRVA 432 (612)
T ss_pred CcccccccccccccccccccCccccHHHccCCCeEEEEEEe-----------------------cCceEEEecCCEEEEe
Confidence 1 0 1 125678888888876 134 48899999975
Q ss_pred c----CCeEEEEeecCCEEEeCceeeCHHHHHHHHhcC
Q 004034 637 K----DGYHWLTGRVDDVINVSGHRIGTAEVESALVSH 670 (778)
Q Consensus 637 ~----dG~l~~~GR~dd~Iki~G~rI~~~eIE~~L~~~ 670 (778)
- .-.|.|++|.+-+..+.|.+..-.++-.++.+.
T Consensus 433 Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 433 GFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred eecCCCceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 3 346999999999999999999999988777653
No 139
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=94.17 E-value=0.0033 Score=54.06 Aligned_cols=44 Identities=16% Similarity=0.103 Sum_probs=30.5
Q ss_pred cccCCCCCCCCccchhhhhhhccccCCCCCcccCCChhhhhccCCC
Q 004034 95 ESLASFPSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVP 140 (778)
Q Consensus 95 ~~~~~~~~~~akfdl~~~~~~~~~~~~~~~~~~y~t~lf~~~~~~~ 140 (778)
.+..+.+.+.+||||++.+. +..+++.+.++|+++||++++|++
T Consensus 47 ~~~~~~~~~~~~~DL~l~~~--~~~~~l~~~~~Y~~~lf~~~ti~~ 90 (91)
T PF13745_consen 47 LEPIPLENGGAKFDLTLEVR--EDGDGLRLQLEYNTDLFSEETIER 90 (91)
T ss_dssp EEE-SS--SB-SSSEEEEEE--E-SS-EEEEEEEETTT--HHHHHH
T ss_pred EEEeeccccceeeeEEEEEE--ecCCeEEEEEEEEhHhCCHHHHhc
Confidence 44556778899999999988 555889999999999999998764
No 140
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=93.13 E-value=0.4 Score=53.05 Aligned_cols=84 Identities=23% Similarity=0.188 Sum_probs=71.3
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCh--HHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~--e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
--+|+.++...+..+|+.|...|+.+||+|.++..-++ .-+...+|+.++|+.++|+.++ .-++-..++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 34899999999999999999999999999998886222 1267889999999999999884 45667789999999999
Q ss_pred EEcCCcc
Q 004034 309 ITSNAVK 315 (778)
Q Consensus 309 it~~~~~ 315 (778)
.+.+++.
T Consensus 187 ~~tps~~ 193 (438)
T COG1541 187 AATPSYL 193 (438)
T ss_pred EEChHHH
Confidence 9998753
No 141
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=81.27 E-value=9.7 Score=43.19 Aligned_cols=80 Identities=18% Similarity=0.149 Sum_probs=62.3
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHH--HHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMEL--PIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~--vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
.-+|..++...+...+..+...|+.+||++.++.+..... ...++++.+.|+..+|... .+....++++.++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 4578999999888889888889999999999998766532 2445788999998777543 2455678899999998
Q ss_pred EEcCC
Q 004034 309 ITSNA 313 (778)
Q Consensus 309 it~~~ 313 (778)
+....
T Consensus 181 ~~~ps 185 (445)
T TIGR03335 181 VASVF 185 (445)
T ss_pred EECHH
Confidence 86543
No 142
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=78.75 E-value=11 Score=42.33 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=63.8
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCh--HHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEE
Q 004034 232 TLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 309 (778)
Q Consensus 232 ~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~--e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~ii 309 (778)
.+|..++...+..++..+...|+++||++....+... ......++..+.|+..+++.+.. .+++...|++.++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4677888777777888888889999999887665443 22334677889999988887754 57888999999999999
Q ss_pred EcCCc
Q 004034 310 TSNAV 314 (778)
Q Consensus 310 t~~~~ 314 (778)
+.+..
T Consensus 173 ~~Ps~ 177 (422)
T TIGR02155 173 VTPSY 177 (422)
T ss_pred EcHHH
Confidence 87654
No 143
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=77.92 E-value=10 Score=38.57 Aligned_cols=54 Identities=20% Similarity=0.203 Sum_probs=45.3
Q ss_pred HHcCCCCCCEEEEEeCCCh--HHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCC
Q 004034 250 KDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKP 305 (778)
Q Consensus 250 ~~~Gv~~Gd~Vai~~~~s~--e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~ 305 (778)
...|+.++|++. .+|-.- -+...+++++..|+..+.+ +.+.++++...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 567899999999 888665 4456789999999988877 79999999999988775
No 144
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=73.46 E-value=9.2 Score=37.26 Aligned_cols=56 Identities=16% Similarity=0.142 Sum_probs=39.3
Q ss_pred HHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCC
Q 004034 660 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGA 720 (778)
Q Consensus 660 ~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~ 720 (778)
..+|+..+.+.|+|.+|.|+...+ ..+||+- ++......++++++|.+.+++..|.
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~~----~a~Vav~-~~~~~~~~~~i~~~V~~~v~~~~p~ 132 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTDD----NAYVAVD-LDFNRFNTKKIKKKVEKAVKSADPR 132 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEECC----EEEEEEE-ecccccchhHHHHHHHHHHHHhCCC
Confidence 567999999999999999996533 2344443 3322333466788888888888876
No 145
>PLN02736 long-chain acyl-CoA synthetase
Probab=69.50 E-value=70 Score=38.15 Aligned_cols=121 Identities=12% Similarity=-0.048 Sum_probs=77.6
Q ss_pred CCCCcEEEE--eCCCCCCCCceEEEccchHHHHHH--HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEE
Q 004034 385 DAEDPLFLL--YTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (778)
Q Consensus 385 ~~~d~a~Il--~TSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl 460 (778)
.|+.+++.. ...|.+|. -..+|.+.+..... ...-...++.++|++...++-.... +..+++++..|+.++.
T Consensus 57 ~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vp 132 (651)
T PLN02736 57 FRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVP 132 (651)
T ss_pred CCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEE
Confidence 466676532 12233222 23357666433221 1222346899999998887766543 4567888999999987
Q ss_pred EcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEec
Q 004034 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (778)
Q Consensus 461 ~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gG 518 (778)
.... ..++.+..+++.-+++++++.+..+..+..... .++.++.++..+
T Consensus 133 l~~~---~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~------~~~~l~~ii~~~ 181 (651)
T PLN02736 133 LYDT---LGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS------EIPSVRLIVVVG 181 (651)
T ss_pred eecC---CCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh------cCCCceEEEEEC
Confidence 7643 478899999999999999999887766654321 235566666543
No 146
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=56.60 E-value=45 Score=31.84 Aligned_cols=57 Identities=18% Similarity=0.205 Sum_probs=33.5
Q ss_pred HHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCC--CHHHHHHHHHHHHhhcCCC
Q 004034 660 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY--SEELRKSLVLAVRKQIGAF 721 (778)
Q Consensus 660 ~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~--~~~l~~~l~~~l~~~Lp~~ 721 (778)
...|.+.+.+.|+|.+|.|+...+ ..++++- ++.+... .+++++++.+.+++..|.+
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~----~A~Vgv~-~~~~~~~~~~~~iK~~Va~~Vk~~dp~~ 114 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGN----YAYVGVD-LTNGLEGSVTDELKEKVAETVKSTDNRI 114 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECC----EEEEEEE-cCCCcchhhHHHHHHHHHHHHHhhCCCc
Confidence 356888889999999999996533 3344442 2222211 2344555555566644443
No 147
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=55.20 E-value=3e+02 Score=30.41 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=43.9
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHH
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 326 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~ 326 (778)
+++||.|.+..+.-......+-...+.+++-+........+.+...++. ++++|+.+.-....+...+++.+
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I 158 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKI 158 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHH
Confidence 6799988766655444444333445565555544444567777777754 57888877655555666665544
No 148
>PRK08315 AMP-binding domain protein; Validated
Probab=52.98 E-value=60 Score=37.63 Aligned_cols=80 Identities=19% Similarity=0.252 Sum_probs=61.4
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCC--ChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM--LMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~--s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
-.+|++.+...+..+.. ..+++++|++...+|. +..++..+++.+..|+..+.....+.+.++...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 46788888766555443 3488999999888776 344556778999999987755667788899999999999999
Q ss_pred EEcCC
Q 004034 309 ITSNA 313 (778)
Q Consensus 309 it~~~ 313 (778)
+..+.
T Consensus 294 ~~~P~ 298 (559)
T PRK08315 294 YGVPT 298 (559)
T ss_pred ecchH
Confidence 87654
No 149
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=52.50 E-value=2e+02 Score=34.99 Aligned_cols=120 Identities=14% Similarity=0.125 Sum_probs=78.1
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHH---HHHHHHh--hCCCCC-----------cEEEEeCCcchhhhhhHHH
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT---ATTFKYA--FDYKPS-----------DVYWCTADCGWITGHSYVT 448 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~---~~~~~~~--~~~~~~-----------d~~l~~~~~~~~~g~~~~i 448 (778)
.++.+|++.... |.+ ...+|.+.+.... +..+... .|+.++ |++..+++-..-. +...
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew--~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW--LVAD 147 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHH--HHHH
Confidence 467777753322 211 1346666643322 2223321 378887 8887777765432 4567
Q ss_pred HHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEecC
Q 004034 449 YGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 449 ~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gGe 519 (778)
++++..|++.|..... ..++.+..+++.-++.++++.+..+..+..... .++.++.+++-+.
T Consensus 148 lA~~~~Gav~Vpl~~~---~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~------~~~~l~~ii~~~~ 209 (746)
T PTZ00342 148 LACMLSGVTTLVMHSK---FSIDVIVDILNETKLEWLCLDLDLVEGLLERKN------ELPHLKKLIILDT 209 (746)
T ss_pred HHHHHcCCeEEEecCC---CCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc------cCCCceEEEEECC
Confidence 8899999999887643 478999999999999999998888877765422 3466777776543
No 150
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=50.28 E-value=1.3e+02 Score=33.18 Aligned_cols=89 Identities=11% Similarity=0.009 Sum_probs=62.5
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHH---HHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
.|+.+|++. -.+-.+|...+... ++..+. ..+++++|++....+-.-. ++..+++++..|+..+..
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~-~~g~~~~~~V~i~~~n~~~--~~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALR-KLGVKKGDRVAILLPNSIE--FVVAFLACLRAGAIPVPL 76 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHH-HTTSSTTSEEEEEESSSHH--HHHHHHHHHHTT-EEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHH-HhCCCccccccccCCccce--eeeeeccccccccccccc
Confidence 477888766 13345666664322 233333 5688899988777776533 356788899999999999
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEe
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYT 487 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~ 487 (778)
+.. ...+.+..++++.+++++++
T Consensus 77 ~~~---~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPS---LSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETT---SSHHHHHHHHHHHTESEEEE
T ss_pred ccc---cccccccccccccceeEEEE
Confidence 753 36788999999999999986
No 151
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.03 E-value=63 Score=36.83 Aligned_cols=96 Identities=23% Similarity=0.194 Sum_probs=67.8
Q ss_pred CCCeEEEEEEcC-CCCc--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCh--HHHHHHHHHHHhCCEEEeCC
Q 004034 214 LGDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVF 288 (778)
Q Consensus 214 ~pd~~Al~~~~~-~~~~--~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~--e~vva~LA~l~~Gav~vpl~ 288 (778)
.++.+|.+.... ..|. ...+|++.+...+..+.. ..+++++|++...+|... .+...+++++..|+..++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 445666554322 1121 346899988766655443 347899999988887643 3345689999999987764
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCC
Q 004034 289 AGFSSDSLAQRIMDCKPKVVITSNA 313 (778)
Q Consensus 289 p~~~~~~l~~~l~~~~~~~iit~~~ 313 (778)
+.+.++.+...+++.++.++.+.+.
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~ 264 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPT 264 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHH
Confidence 5678999999999999999987654
No 152
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=49.19 E-value=3.2e+02 Score=31.69 Aligned_cols=99 Identities=10% Similarity=-0.081 Sum_probs=67.6
Q ss_pred cEEEEeCCCCCCCCceEEEccchHHH---HHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCC
Q 004034 389 PLFLLYTSGSTGKPKGVLHTTGGYMV---HTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAP 465 (778)
Q Consensus 389 ~a~Il~TSGSTG~PKgV~~th~~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~ 465 (778)
-..|+|-+-.++. -.+|.+.+.. ..+..++...+. ++|++..++|....+ ...++++.-.|+.-+.+.+.
T Consensus 26 ~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~--~~a~LA~~riGAI~~~vf~~- 98 (528)
T COG0365 26 DTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA--VIALLATARIGAIPAVVSPG- 98 (528)
T ss_pred ceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH--HHHHHHHHHcCCEEeecccC-
Confidence 3445555444444 4566665332 223333344567 999999999998765 56778888889876665432
Q ss_pred CCCChhHHHHHHHHhCccEEEecHHHHHHHH
Q 004034 466 TYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 496 (778)
Q Consensus 466 ~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~ 496 (778)
+.++.+...+..-++.++.+....++...
T Consensus 99 --f~~~al~~Ri~d~~~k~vit~d~~~~~gk 127 (528)
T COG0365 99 --LSAEAVADRIADLGPKVLIADDGTFRNGK 127 (528)
T ss_pred --CCHHHHHHHHHccCCCEEEEecccccccc
Confidence 57899999999999999998887766554
No 153
>PRK12583 acyl-CoA synthetase; Provisional
Probab=48.87 E-value=83 Score=36.42 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=60.4
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCC--ChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM--LMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~--s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
..+|++.+...+..+... .|++++|+|...+|- ....+..+++++..|+..+.....+.+.++...+++.++.++
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 468888886665554433 478999999887764 345667778889999877754556788888999999999999
Q ss_pred EEcCC
Q 004034 309 ITSNA 313 (778)
Q Consensus 309 it~~~ 313 (778)
+..+.
T Consensus 296 ~~~P~ 300 (558)
T PRK12583 296 YGVPT 300 (558)
T ss_pred eccHH
Confidence 87654
No 154
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=47.94 E-value=60 Score=32.51 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=47.9
Q ss_pred eeeCHHHHHHHHhcCCccceEEEEEE-ecC--C--CC--eEEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEE
Q 004034 656 HRIGTAEVESALVSHPQCAEAAVVGV-EHE--V--KG--QGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIH 728 (778)
Q Consensus 656 ~rI~~~eIE~~L~~~p~V~ea~Vv~~-~~~--~--~~--~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~ 728 (778)
.|---+|+|+.|.++++|..|-|... |.+ . .. ..--+++.++++...+ +..+.|++.+...+|. +-|..|.
T Consensus 113 ~~ale~eL~~tI~~i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~l~-~qv~~I~~LVa~sV~g-L~~enVt 190 (206)
T PF01514_consen 113 QRALEGELERTIESIDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSELS-EQVQGIQNLVASSVPG-LKPENVT 190 (206)
T ss_dssp HHHHHHHHHHHHTTSTTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS--G-GGHHHHHHHHHHHSTT---GGGEE
T ss_pred HHHHHHHHHHHHHcCCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCChH-HHHHHHHHHHHHhcCC-CCcccEE
Confidence 34456899999999999999988544 322 1 11 2234455567777665 5678999999999985 5677777
Q ss_pred ECCC
Q 004034 729 WAPG 732 (778)
Q Consensus 729 ~v~~ 732 (778)
++|.
T Consensus 191 VvD~ 194 (206)
T PF01514_consen 191 VVDQ 194 (206)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 7763
No 155
>PRK05934 type III secretion system protein; Validated
Probab=46.88 E-value=1e+02 Score=32.55 Aligned_cols=71 Identities=18% Similarity=0.165 Sum_probs=53.3
Q ss_pred HHHHHHHhcCCccceEEE-EEEecCCCC-eEEEEEEE--EcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECCC
Q 004034 661 AEVESALVSHPQCAEAAV-VGVEHEVKG-QGIYAFVT--LVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPG 732 (778)
Q Consensus 661 ~eIE~~L~~~p~V~ea~V-v~~~~~~~~-~~lva~Vv--~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~ 732 (778)
+|+++.|.++++|.+|.| +..+++... +..-|-|+ ++++...+++..+.|...|...+|. +-|..|.++|.
T Consensus 74 GELaRTIesld~VesARVHLAlPe~s~~~~~pTASVvLtL~~G~tLs~~QV~gIvnLVAsSVpG-LtpEnVTVVDq 148 (341)
T PRK05934 74 EQLEKDLTMFHPVAQATVALSLETEDDPMSPAEISVILSLPKAETLSPSLLHSITDYLTSSVPG-LTKEHITLSDN 148 (341)
T ss_pred HHHHHHHHcccCcceeEEEEeCCCCCccCCCCceEEEEecCCCCcCCHHHHHHHHHHHHhcCCC-CCccCeEEECC
Confidence 688899999999999998 444544322 33444444 4666667777789999999999985 78999999986
No 156
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=46.67 E-value=1.7e+02 Score=35.34 Aligned_cols=86 Identities=10% Similarity=0.032 Sum_probs=64.6
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcc
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY 502 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~ 502 (778)
..++.++|++...++-.... +...++++..|+..|..... ..++.+..+++..+++++++....+..+.....
T Consensus 125 ~lG~~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~-- 197 (696)
T PLN02387 125 ALGHNKEERVAIFADTRAEW--LIALQGCFRQNITVVTIYAS---LGEEALCHSLNETEVTTVICDSKQLKKLIDISS-- 197 (696)
T ss_pred HhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCC---CCHHHHHHHHHccCCCEEEECHHHHHHHHHHhh--
Confidence 46889999988887766542 45678889999999877543 478899999999999999998888777765422
Q ss_pred cccCCCCceeEEEEecC
Q 004034 503 VTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 503 ~~~~~l~sLr~v~~gGe 519 (778)
.++.++.+++-++
T Consensus 198 ----~~~~l~~ii~~~~ 210 (696)
T PLN02387 198 ----QLETVKRVIYMDD 210 (696)
T ss_pred ----ccCCceEEEEECC
Confidence 3456777776554
No 157
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.20 E-value=99 Score=35.21 Aligned_cols=96 Identities=13% Similarity=0.141 Sum_probs=66.7
Q ss_pred CCeEEEEEEcC-CCCc--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHH-HHHHHHHHHhCCEEEeCCCC
Q 004034 215 GDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMEL-PIAMLACARIGAVHSVVFAG 290 (778)
Q Consensus 215 pd~~Al~~~~~-~~~~--~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~-vva~LA~l~~Gav~vpl~p~ 290 (778)
++.+|.+.... ..|. .-.+|++.+...+..... ..+++++|++...+|..... ....++++..|+..+..+.
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~- 241 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR- 241 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC-
Confidence 34566654322 1122 235788888866665554 55889999999888765433 3344558889998777665
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCc
Q 004034 291 FSSDSLAQRIMDCKPKVVITSNAV 314 (778)
Q Consensus 291 ~~~~~l~~~l~~~~~~~iit~~~~ 314 (778)
++.+.+...+++.++.++++.+..
T Consensus 242 ~~~~~~~~~l~~~~~t~l~~~p~~ 265 (521)
T PRK06187 242 FDPENLLDLIETERVTFFFAVPTI 265 (521)
T ss_pred CCHHHHHHHHHHhCCeEEEchHHH
Confidence 489999999999999999987653
No 158
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=44.18 E-value=1.6e+02 Score=33.38 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=70.6
Q ss_pred ceEEEccchHHHHH--HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHh
Q 004034 403 KGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKY 480 (778)
Q Consensus 403 KgV~~th~~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~ 480 (778)
-|+..|-+.+.... .++--..+++.+||++..+.|-+.- + +...+++-..|..++... |.++ ...+.=.|.+.
T Consensus 74 eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~-w-~l~~lA~A~AG~v~v~~N--P~Yq-~~elr~~L~k~ 148 (596)
T KOG1177|consen 74 EGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYE-W-VLCQLACARAGLVLVNLN--PAYQ-SEELRYVLKKV 148 (596)
T ss_pred ccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHH-H-HHHHHHHHHhceEEeccC--cccc-cHHHHHHHhhc
Confidence 34445555543322 1122235799999999888876532 1 334566667788877765 4453 45566678999
Q ss_pred CccEEEecHHHH-----HHHHhcC-------CcccccCCCCceeEEEEecC
Q 004034 481 KVTIFYTAPTLV-----RSLMRDG-------NEYVTRYSRKSLRVLGSVGE 519 (778)
Q Consensus 481 ~vT~l~~~Ps~l-----~~L~~~~-------~~~~~~~~l~sLr~v~~gGe 519 (778)
++..++..|.+. +.|++.. ....+...++.|+.+++.+|
T Consensus 149 ~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 149 GCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred CeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 999999988753 3344332 12244567889999998883
No 159
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=43.09 E-value=97 Score=24.66 Aligned_cols=54 Identities=22% Similarity=0.270 Sum_probs=35.8
Q ss_pred EEeC-ceeeCHHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHhhc
Q 004034 651 INVS-GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQI 718 (778)
Q Consensus 651 Iki~-G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~L 718 (778)
|++. +. -...++.+.|.++|+|.+|..+ .+...+.+.+..++ .+++.+.+.+.+
T Consensus 3 V~~~~~~-~~~~~~~~~l~~~p~V~~~~~v-----tG~~d~~~~v~~~d--------~~~l~~~i~~~l 57 (74)
T PF01037_consen 3 VKVEPGH-DAYDEFAEALAEIPEVVECYSV-----TGEYDLILKVRARD--------MEELEEFIREKL 57 (74)
T ss_dssp EEESTTG-THHHHHHHHHHTSTTEEEEEEE-----SSSSSEEEEEEESS--------HHHHHHHHHHTH
T ss_pred EEEcCCC-chHHHHHHHHHcCCCEEEEEEE-----eCCCCEEEEEEECC--------HHHHHHHHHHHh
Confidence 4444 33 4478899999999999999988 34445666666542 345555555543
No 160
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=42.29 E-value=1.8e+02 Score=34.45 Aligned_cols=96 Identities=15% Similarity=-0.004 Sum_probs=64.9
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHH---HHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
.++.+|.+. .+..+|. .-.+|.+.+... ++..+ ...++.++|++...++-.... +..+++++..|+..+..
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L-~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAML-RSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHH-HHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEee
Confidence 467777654 3322232 234676664322 22222 346899999999998877543 56788899999998887
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEecH
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAP 489 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~~P 489 (778)
.+. ..++.+...|+..++..+++..
T Consensus 140 ~~~---~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 140 FGG---FASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCC---CCHHHHHHHHHhcCCcEEEEcc
Confidence 643 4778899999999999888754
No 161
>PLN03051 acyl-activating enzyme; Provisional
Probab=41.76 E-value=1.7e+02 Score=33.49 Aligned_cols=82 Identities=12% Similarity=0.026 Sum_probs=58.1
Q ss_pred ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChH-HHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 230 ~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e-~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
+..+|++.+...+... ....++.++|++...+|-+.. .+..+++++..|+..+.....+.++++...+++.++.++
T Consensus 136 gV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~ 212 (499)
T PLN03051 136 AIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVL 212 (499)
T ss_pred eEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEE
Confidence 3467887765543332 234578899998777765432 134577888999988777655677889999999999999
Q ss_pred EEcCCc
Q 004034 309 ITSNAV 314 (778)
Q Consensus 309 it~~~~ 314 (778)
...+..
T Consensus 213 ~~vP~~ 218 (499)
T PLN03051 213 GLVPSI 218 (499)
T ss_pred EeCHHH
Confidence 987653
No 162
>PRK07788 acyl-CoA synthetase; Validated
Probab=40.47 E-value=2.5e+02 Score=32.35 Aligned_cols=87 Identities=10% Similarity=-0.004 Sum_probs=61.5
Q ss_pred EEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCcc
Q 004034 406 LHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (778)
Q Consensus 406 ~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT 483 (778)
.+|.+.+...... ..-...++.++|++....+-+.. ++..+++++..|+..+..+.. ...+.+..++++.+++
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~--~~~~~la~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~ 148 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRG--FVLALYAAGKVGARIILLNTG---FSGPQLAEVAAREGVK 148 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCCEEEEeCCC---CCHHHHHHHHHhcCCc
Confidence 4666664322211 11123578899998888776643 356778999999999998653 3678899999999999
Q ss_pred EEEecHHHHHHHHh
Q 004034 484 IFYTAPTLVRSLMR 497 (778)
Q Consensus 484 ~l~~~Ps~l~~L~~ 497 (778)
.+++.+.....+..
T Consensus 149 ~ii~~~~~~~~~~~ 162 (549)
T PRK07788 149 ALVYDDEFTDLLSA 162 (549)
T ss_pred EEEECchhHHHHHh
Confidence 99998876665543
No 163
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=39.88 E-value=4.7e+02 Score=31.22 Aligned_cols=122 Identities=12% Similarity=0.024 Sum_probs=74.0
Q ss_pred CCCCcEEEEe--CCCCCCCCceEEEccchHHHHHH--HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEE
Q 004034 385 DAEDPLFLLY--TSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (778)
Q Consensus 385 ~~~d~a~Il~--TSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl 460 (778)
.|+.+++..- ..|..|.- ..+|.+.+..... ...-...++.++|++...++-..-. +...++++..|+..|.
T Consensus 55 ~p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew--~~~~lA~~~~G~v~vp 130 (660)
T PLN02430 55 YPDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW--IVAMEACAAHSLICVP 130 (660)
T ss_pred CCCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEE
Confidence 3566665432 23333322 2346665433221 1222345899999988887766532 4567889999998887
Q ss_pred EcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCcccccCCCCceeEEEEec
Q 004034 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (778)
Q Consensus 461 ~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~~~l~sLr~v~~gG 518 (778)
.... ..++.+..+++..+++.+++....+..++.... ...+.++.+++..
T Consensus 131 l~~~---~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~l~~ii~~~ 180 (660)
T PLN02430 131 LYDT---LGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDC-----KSAKRLKAIVSFT 180 (660)
T ss_pred eccC---CCHHHHHHHHhccCCCEEEECHHHHHHHHhhhc-----ccCCCceEEEEEC
Confidence 7543 478899999999999999988765444433211 1234566666543
No 164
>PLN02614 long-chain acyl-CoA synthetase
Probab=39.44 E-value=5.3e+02 Score=30.81 Aligned_cols=106 Identities=13% Similarity=0.020 Sum_probs=68.9
Q ss_pred CCCCcEEEEeC--CCCCCCCceEEEccchHHHHH--HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEE
Q 004034 385 DAEDPLFLLYT--SGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (778)
Q Consensus 385 ~~~d~a~Il~T--SGSTG~PKgV~~th~~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl 460 (778)
.|+.+|.+.-. .|..|. -..+|.+.+.... ....-...++.++|++...++-.... +...++++..|+..|.
T Consensus 58 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vp 133 (666)
T PLN02614 58 YPNNPMLGRREIVDGKPGK--YVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW--IISMEACNAHGLYCVP 133 (666)
T ss_pred CCCCCeEEEecccCCCCCC--cEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEE
Confidence 46777765311 121121 1335666643222 11122346899999988888776543 5567889999999988
Q ss_pred EcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHh
Q 004034 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMR 497 (778)
Q Consensus 461 ~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~ 497 (778)
.... ..++.+..+++..+++++++....+..+..
T Consensus 134 l~~~---~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 167 (666)
T PLN02614 134 LYDT---LGAGAVEFIISHSEVSIVFVEEKKISELFK 167 (666)
T ss_pred ecCC---CCHHHHHHHHhccCCCEEEECHHHHHHHHH
Confidence 7643 477889999999999999998776655543
No 165
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=39.40 E-value=5.1e+02 Score=30.92 Aligned_cols=87 Identities=10% Similarity=-0.045 Sum_probs=61.7
Q ss_pred EEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCcc
Q 004034 406 LHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (778)
Q Consensus 406 ~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT 483 (778)
.+|.+.+...... ..-...++.++|++...++-.... +...++++..|+..|..... ..++.+..++++-+++
T Consensus 77 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~il~~s~~~ 151 (660)
T PLN02861 77 WLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDT---LGANAVEFIINHAEVS 151 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCC---CCHHHHHHHHHcCCCC
Confidence 4677764332221 222346889999988888776543 55678899999998887643 3778899999999999
Q ss_pred EEEecHHHHHHHHh
Q 004034 484 IFYTAPTLVRSLMR 497 (778)
Q Consensus 484 ~l~~~Ps~l~~L~~ 497 (778)
++++....+..+..
T Consensus 152 ~v~~~~~~~~~~~~ 165 (660)
T PLN02861 152 IAFVQESKISSILS 165 (660)
T ss_pred EEEECHHHHHHHHH
Confidence 99987776655543
No 166
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=39.37 E-value=1.9e+02 Score=34.15 Aligned_cols=98 Identities=11% Similarity=-0.056 Sum_probs=66.3
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHHH--HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.|+.+|.+.... .+|. ...+|.+.+..... ...-...++.++|++...++-.... +..+++++..|+..+...
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEeccC
Confidence 467777664321 1222 34577776432221 1122346899999999998877543 567788999999988875
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecHH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPT 490 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~Ps 490 (778)
.. ..++.+...++..+++.+++...
T Consensus 145 ~~---~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GG---FSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CC---CCHHHHHHHHHhcCCCEEEEcCc
Confidence 43 47788999999999998887653
No 167
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=39.08 E-value=1.5e+02 Score=33.68 Aligned_cols=81 Identities=11% Similarity=0.139 Sum_probs=62.3
Q ss_pred ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChH-HHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 230 ~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e-~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
...+|++.+...+..+... .++.+||++...+|.+.. .+..+++++..|+..+.. +.+.++.+...+++.++.++
T Consensus 178 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 178 GVVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGL 253 (515)
T ss_pred eEEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceE
Confidence 4568888887776665543 367899999998886543 345678889999987755 55788999999999999999
Q ss_pred EEcCCc
Q 004034 309 ITSNAV 314 (778)
Q Consensus 309 it~~~~ 314 (778)
.+.+..
T Consensus 254 ~~~P~~ 259 (515)
T TIGR03098 254 AAVPPL 259 (515)
T ss_pred ecChHH
Confidence 987653
No 168
>PLN03052 acetate--CoA ligase; Provisional
Probab=38.82 E-value=2.4e+02 Score=34.21 Aligned_cols=100 Identities=12% Similarity=0.068 Sum_probs=67.1
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHHH--HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.++.+|.+.-..+..|.+ ...+|.+.+..... +..-...++.++|++...++-...+ +..+++++..|+..+.+.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeC
Confidence 357777654332221222 23467666432221 1222346899999999999877544 567889999999998886
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecHH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPT 490 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~Ps 490 (778)
.. +.++.+...++..+++++++...
T Consensus 265 p~---~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 265 DS---FAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CC---CCHHHHHHHHHhcCceEEEEcCc
Confidence 53 47899999999999999888654
No 169
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=38.49 E-value=2.1e+02 Score=29.17 Aligned_cols=75 Identities=17% Similarity=0.145 Sum_probs=41.4
Q ss_pred CcEEEEecCCeEEEEeecCCEEEeCce-eeCHHH--HHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCCHHH
Q 004034 630 GDGCSRDKDGYHWLTGRVDDVINVSGH-RIGTAE--VESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEEL 706 (778)
Q Consensus 630 GDl~~~~~dG~l~~~GR~dd~Iki~G~-rI~~~e--IE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l 706 (778)
|++.+.++||.+.|.|.. +.+.+. ++++.+ ++..+.++| .+.++++.++ .....+|..++.+.....+
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~----~k~~I~vFtDp~CpyCkkl 125 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQ----EKHVITVFTDITCGYCHKL 125 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCC----CCEEEEEEECCCChHHHHH
Confidence 568888999999999865 444442 333333 333444555 3455554332 2344555566666654444
Q ss_pred HHHHHHH
Q 004034 707 RKSLVLA 713 (778)
Q Consensus 707 ~~~l~~~ 713 (778)
.+++.++
T Consensus 126 ~~~l~~~ 132 (232)
T PRK10877 126 HEQMKDY 132 (232)
T ss_pred HHHHHHH
Confidence 4454443
No 170
>PRK07529 AMP-binding domain protein; Validated
Probab=38.07 E-value=4.2e+02 Score=31.36 Aligned_cols=98 Identities=10% Similarity=0.097 Sum_probs=63.0
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.|+.+|.+.+..+.. ..++..+|.+.+...... ..-...++.++|++...++-.... +..+++++..|. ++..+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi-~~pi~ 113 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGI-ANPIN 113 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCE-EEeCC
Confidence 467777765533221 123456777764332221 122246889999999998877643 556778888874 34333
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAP 489 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~P 489 (778)
+. ..++.+..++++.++..+.+..
T Consensus 114 --~~-~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 114 --PL-LEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred --Cc-CCHHHHHHHHHhcCCcEEEEeC
Confidence 22 3789999999999999888853
No 171
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=37.62 E-value=1.3e+02 Score=34.23 Aligned_cols=80 Identities=14% Similarity=0.129 Sum_probs=58.2
Q ss_pred CCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHhcCCccccc
Q 004034 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (778)
Q Consensus 426 ~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~~~~~~~~~ 505 (778)
..+||+++.=.|.++.. ..++ -..|..++-++-+..-.+++.+-+.++++++..++++|++ +.+
T Consensus 176 ~~pGd~v~vE~PtY~~~---~~~~--~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~-----qNP------ 239 (459)
T COG1167 176 LDPGDTVLVEDPTYPGA---LQAL--EALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF-----QNP------ 239 (459)
T ss_pred CCCCCEEEEcCCCcHHH---HHHH--HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC-----CCC------
Confidence 45899999988887643 2333 3468888877655555699999999999999999999972 111
Q ss_pred CCCCceeEEEEecCCCCHHHHHHHHHH
Q 004034 506 YSRKSLRVLGSVGEPINPSAWRWFFNV 532 (778)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (778)
.|..++.+-.+.+.+.
T Consensus 240 -----------tG~tms~~rR~~Ll~l 255 (459)
T COG1167 240 -----------TGVTMSLERRKALLAL 255 (459)
T ss_pred -----------CCCccCHHHHHHHHHH
Confidence 2667777777666554
No 172
>PRK09274 peptide synthase; Provisional
Probab=37.19 E-value=2.9e+02 Score=31.90 Aligned_cols=99 Identities=9% Similarity=-0.079 Sum_probs=63.0
Q ss_pred CCCcEEEEeCCCCC-CCCceEEEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 386 AEDPLFLLYTSGST-GKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 386 ~~d~a~Il~TSGST-G~PKgV~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
|+.+|++....+++ ...+-..+|.+.+...... ......++.++|++....+-+... +..+++++..|+..+..+
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF--FALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH--HHHHHHHHHcCeEEEEcC
Confidence 56666554322221 1122225677764322211 112245789999999888876543 566788999999988876
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAP 489 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~P 489 (778)
.. ...+.+..++++.++..+...+
T Consensus 98 ~~---~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PG---MGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CC---ccHHHHHHHHHhcCCCEEEecc
Confidence 43 3677888899999999887754
No 173
>TIGR02544 III_secr_YscJ type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF.
Probab=36.54 E-value=1.7e+02 Score=29.00 Aligned_cols=70 Identities=14% Similarity=0.098 Sum_probs=46.8
Q ss_pred CHHHHHHHHhcCCccceEEEEE-EecCC----CCe--EEEEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEEC
Q 004034 659 GTAEVESALVSHPQCAEAAVVG-VEHEV----KGQ--GIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWA 730 (778)
Q Consensus 659 ~~~eIE~~L~~~p~V~ea~Vv~-~~~~~----~~~--~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v 730 (778)
--+|+++.|..+++|.+|-|.. .|.+. ..+ .--+++.++++...+. ..+.|++.+...+|. +-|..|-++
T Consensus 108 le~EL~rtI~~i~~V~~ArVhl~~P~~~~f~~~~~~~sASV~l~~~~g~~l~~-qv~~I~~LVa~SV~~-L~~enVtVv 184 (193)
T TIGR02544 108 IEQRLEQTLSQIDGVISARVHVVLPENDNNGRPKKPSSASVFIKYRPGLNLDA-LIPKIKRLVANSIPG-LDYDNVSVV 184 (193)
T ss_pred HHHHHHHHHHhcCCeeeeEEEEECCCCCcccccCCCCcEEEEEEeCCCCCcHH-HHHHHHHHHHHhcCC-CCccceEEE
Confidence 4579999999999999998843 34321 112 2334445566654433 578999999999986 456666555
No 174
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=35.65 E-value=2.7e+02 Score=32.14 Aligned_cols=83 Identities=11% Similarity=0.029 Sum_probs=59.1
Q ss_pred EccchHHHHHHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEE
Q 004034 407 HTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFY 486 (778)
Q Consensus 407 ~th~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~ 486 (778)
+|.+.+. .........+.-.++|++...++-.... +..+++++..|+..+..+.. ...+++..+++.-+++.+.
T Consensus 46 ~Ty~el~-~~~~~lA~~L~~~~gd~Val~~~n~~e~--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~~l~~~~~~~ii 119 (539)
T PRK06334 46 LSYNQVR-KAVIALATKVSKYPDQHIGIMMPASAGA--YIAYFATLLSGKIPVMINWS---QGLREVTACANLVGVTHVL 119 (539)
T ss_pred ccHHHHH-HHHHHHHHHHhhccCCeEEEEcCCchHH--HHHHHHHHhcCCeeEecCcc---cchHHHHHHHHHcCCCEEE
Confidence 6777643 3333333334345799998888877653 56778999999998887643 3678899999999999998
Q ss_pred ecHHHHHHH
Q 004034 487 TAPTLVRSL 495 (778)
Q Consensus 487 ~~Ps~l~~L 495 (778)
+....+..+
T Consensus 120 ~~~~~~~~~ 128 (539)
T PRK06334 120 TSKQLMQHL 128 (539)
T ss_pred ehHHHHHHH
Confidence 887665544
No 175
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=35.55 E-value=3.1e+02 Score=32.50 Aligned_cols=98 Identities=10% Similarity=-0.105 Sum_probs=66.6
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.|+.+|.+.... . ......+|.+.+...... ..-...++.++|++...++-.... +..+++++..|+..+...
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecC
Confidence 467777664221 1 113456788874332221 112246889999999988877654 567889999999998876
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecHH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPT 490 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~Ps 490 (778)
.. ..++.+...++..++..+++...
T Consensus 155 ~~---~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GG---FSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CC---CCHHHHHHHHHhcCCcEEEEcCc
Confidence 43 37788999999999998887543
No 176
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=35.17 E-value=77 Score=34.71 Aligned_cols=65 Identities=23% Similarity=0.303 Sum_probs=43.1
Q ss_pred HHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCC-----CCCHHHHHHHHHhcCCcEEEEcC
Q 004034 244 QLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA-----GFSSDSLAQRIMDCKPKVVITSN 312 (778)
Q Consensus 244 ~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p-----~~~~~~l~~~l~~~~~~~iit~~ 312 (778)
.|-..|+.+|+++||.|.+-. .-+....-|++.+|+.++.+|- ...++.++.++..-. ++|+...
T Consensus 52 Al~~al~~l~~~~gdeVi~p~---~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h 121 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPA---YTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVH 121 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEES---SS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-
T ss_pred HHHHHHHhcCCCcCceEecCC---CcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEec
Confidence 344467779999999887764 4455567789999997777654 366788888877544 6666544
No 177
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=35.13 E-value=2.7e+02 Score=33.23 Aligned_cols=93 Identities=13% Similarity=0.027 Sum_probs=63.5
Q ss_pred CCcEEEEeCCCCCCCCceEEEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcC
Q 004034 387 EDPLFLLYTSGSTGKPKGVLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (778)
Q Consensus 387 ~d~a~Il~TSGSTG~PKgV~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~ 463 (778)
++++.+... .+|. ...+|.+.+.... +..+ ...++.++|++...++-.... +..+++++..|+..+....
T Consensus 99 ~~~a~~~~~--~~~~--~~~~Ty~eL~~~v~~lA~~L-~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 99 TEPALLYVD--ETHE--PAPVTWAELRRQVASLAAAL-RALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSP 171 (652)
T ss_pred CCeEEEEEC--CCCC--eeEEeHHHHHHHHHHHHHHH-HHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCC
Confidence 556655432 2232 2456777643222 2222 346899999999999887644 5677889999999888764
Q ss_pred CCCCCChhHHHHHHHHhCccEEEecH
Q 004034 464 APTYPDSGRSWDIVDKYKVTIFYTAP 489 (778)
Q Consensus 464 ~~~~~~~~~~~~~i~~~~vT~l~~~P 489 (778)
. ..++.+...+++.++..+++..
T Consensus 172 ~---~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 172 D---FGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred C---CCHHHHHHHHHhcCCcEEEEcc
Confidence 3 4678899999999999888754
No 178
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=35.05 E-value=1.3e+02 Score=33.31 Aligned_cols=78 Identities=13% Similarity=0.114 Sum_probs=58.6
Q ss_pred ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCh-HHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 230 ~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~-e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
...+|++.+...+..++.. .+++++|++...+|-.. ..+..+++.+..|+..+..++. +++...+++.++.++
T Consensus 128 ~v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 128 AVPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHI 201 (436)
T ss_pred EEEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEE
Confidence 3468999998877766654 47899999988886543 2234568889999987776543 488889999999999
Q ss_pred EEcCC
Q 004034 309 ITSNA 313 (778)
Q Consensus 309 it~~~ 313 (778)
.+...
T Consensus 202 ~~~P~ 206 (436)
T TIGR01923 202 SLVPT 206 (436)
T ss_pred EeHHH
Confidence 87654
No 179
>PLN02654 acetate-CoA ligase
Probab=34.70 E-value=2.6e+02 Score=33.44 Aligned_cols=97 Identities=9% Similarity=-0.034 Sum_probs=65.6
Q ss_pred CCCcEEEEeCCCCCCCCceEEEccchHHHHHH--HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcC
Q 004034 386 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (778)
Q Consensus 386 ~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~ 463 (778)
++.+|.+ |.....| ....+|.+.+..... ...-...+++++|++...++-.... +..+++++..|+..+....
T Consensus 103 ~~~~Al~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~--v~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 103 GDKIAIY-WEGNEPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL--PIAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCEEEE-EEcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecCC
Confidence 5666654 3221111 134577777433222 1222356899999999998877543 5678899999999888764
Q ss_pred CCCCCChhHHHHHHHHhCccEEEecHH
Q 004034 464 APTYPDSGRSWDIVDKYKVTIFYTAPT 490 (778)
Q Consensus 464 ~~~~~~~~~~~~~i~~~~vT~l~~~Ps 490 (778)
. ..++.+...++..++.++++...
T Consensus 178 ~---~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 178 G---FSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred C---CCHHHHHHHHHhcCceEEEEcCc
Confidence 3 47889999999999998887654
No 180
>PRK05852 acyl-CoA synthetase; Validated
Probab=34.21 E-value=3.9e+02 Score=30.68 Aligned_cols=81 Identities=16% Similarity=0.158 Sum_probs=59.1
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCh--HHHHHHHHHHHhCCEEE-eCCCCCCHHHHHHHHHhcCCcE
Q 004034 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHS-VVFAGFSSDSLAQRIMDCKPKV 307 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~--e~vva~LA~l~~Gav~v-pl~p~~~~~~l~~~l~~~~~~~ 307 (778)
-.+|++.+...+..+... .+++++|++..++|... .++..+++++..|+..+ |-...+.+.++...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITG---YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHH---hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 457888887766665543 36889998888877654 45566888888887544 3344677888999999999998
Q ss_pred EEEcCCc
Q 004034 308 VITSNAV 314 (778)
Q Consensus 308 iit~~~~ 314 (778)
++..+..
T Consensus 271 ~~~~P~~ 277 (534)
T PRK05852 271 YTAVPTI 277 (534)
T ss_pred EEcChHH
Confidence 8877653
No 181
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=34.16 E-value=1.3e+02 Score=33.08 Aligned_cols=66 Identities=21% Similarity=0.221 Sum_probs=50.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCC-----CCCHHHHHHHHHhcCCcEEEEcC
Q 004034 243 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA-----GFSSDSLAQRIMDCKPKVVITSN 312 (778)
Q Consensus 243 ~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p-----~~~~~~l~~~l~~~~~~~iit~~ 312 (778)
..|.-.|+.+|+++||-|.+ .+.-++...=+++..|+.+|.+|- ..+++.++..|... .|.||...
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVh 130 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVH 130 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEeh
Confidence 44555677889999995433 466788888899999998887764 36788899888876 77777654
No 182
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=34.00 E-value=1.8e+02 Score=31.86 Aligned_cols=74 Identities=18% Similarity=0.095 Sum_probs=55.9
Q ss_pred HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 417 ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 417 ~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
...+....++.++|++....+-... +...+++++..|+.++..+.. ...+.+..++++.+++.+...+.....+
T Consensus 13 a~~l~~~~g~~~gd~v~l~~~n~~~--~~~~~~a~~~~G~~~v~~~~~---~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 13 ARHLRAAGGVGPGDRVAVLLERSAE--LVVAILAVLKAGAAYVPLDPA---YPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred HHHHHHhhCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEEcCCC---CCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 3333333678899998888887754 356678889999999888643 3678889999999999999988766554
No 183
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=33.53 E-value=3e+02 Score=32.68 Aligned_cols=95 Identities=11% Similarity=-0.043 Sum_probs=64.5
Q ss_pred CCCcEEEEeCCCCCCCCceEEEccchHHHHHH--HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcC
Q 004034 386 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (778)
Q Consensus 386 ~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~ 463 (778)
++.+|.+.... .|. ...+|.+.+..... ...-...++.++|++...++-.... +..+++++..|+..+....
T Consensus 98 ~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 98 DDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET--VVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEeeCC
Confidence 56777654322 221 34577776432221 1122245889999999998877544 5678899999999888864
Q ss_pred CCCCCChhHHHHHHHHhCccEEEecH
Q 004034 464 APTYPDSGRSWDIVDKYKVTIFYTAP 489 (778)
Q Consensus 464 ~~~~~~~~~~~~~i~~~~vT~l~~~P 489 (778)
. ..++.+...++..++..+++..
T Consensus 172 ~---~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 172 D---FGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred C---CCHHHHHHHHHHcCCcEEEEcc
Confidence 3 3678899999999999888765
No 184
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=33.38 E-value=1.2e+02 Score=33.48 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=39.3
Q ss_pred HHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCC--CC---CCHHHHHHHHHhcCCcEEEEcC
Q 004034 248 YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--AG---FSSDSLAQRIMDCKPKVVITSN 312 (778)
Q Consensus 248 ~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~--p~---~~~~~l~~~l~~~~~~~iit~~ 312 (778)
.++.+++++||.|.+-.+ .+.....++...|+.+++++ ++ ...+.++..+.. +.++|+...
T Consensus 62 ~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~ 127 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVH 127 (376)
T ss_pred HHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeC
Confidence 445568999999877444 34445566678898666554 33 456777776653 677776543
No 185
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=33.05 E-value=1.6e+02 Score=34.23 Aligned_cols=96 Identities=16% Similarity=0.052 Sum_probs=65.3
Q ss_pred CCeEEEEE-EcCCCCc--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChH--HHHHHHHHHHhCCEEEeCCC
Q 004034 215 GDKVAIYW-EANDPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVFA 289 (778)
Q Consensus 215 pd~~Al~~-~~~~~~~--~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e--~vva~LA~l~~Gav~vpl~p 289 (778)
++.+|++. ....+|. .-.+|++.+...+.... ...+++++|++...++.... ....+++.+..|+..+....
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~ 280 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGK---YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG 280 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC
Confidence 44555553 3222222 34578887765443333 34578899987766655433 24567888899998777777
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCC
Q 004034 290 GFSSDSLAQRIMDCKPKVVITSNA 313 (778)
Q Consensus 290 ~~~~~~l~~~l~~~~~~~iit~~~ 313 (778)
.+.++++...+++.++.++.+.+.
T Consensus 281 ~~~~~~~~~~i~~~~~t~~~~~P~ 304 (570)
T PRK04319 281 RFSPERWYRILEDYKVTVWYTAPT 304 (570)
T ss_pred CCCHHHHHHHHHHcCCeEEEeCHH
Confidence 789999999999999999987764
No 186
>PRK05939 hypothetical protein; Provisional
Probab=32.89 E-value=2.3e+02 Score=31.52 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=44.5
Q ss_pred HHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHH
Q 004034 247 NYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 325 (778)
Q Consensus 247 ~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~ 325 (778)
..|..+ +++||.|.+.-+--......+-++.+.|+.+..++.. ..+.++..+. -+.++|++..-....+...+++.
T Consensus 77 ~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~ 152 (397)
T PRK05939 77 AVFLTL-LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIR-PNTRMVFVETIANPGTQVADLAG 152 (397)
T ss_pred HHHHHH-cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHH
Confidence 334444 7899998775433223333334456789877777653 5677887774 36787877654433344434433
No 187
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=32.63 E-value=3e+02 Score=31.82 Aligned_cols=98 Identities=9% Similarity=-0.049 Sum_probs=65.1
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHHH--HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.|+.+|++..-. +.++...+|...+..... .......++.++|++....+-.... +..+++.+..|+..+..+
T Consensus 37 ~p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 37 CPDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPLM 111 (547)
T ss_pred CCCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEeccc
Confidence 467777764322 233344677776432221 1122245889999999988877654 567788999999988775
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecHH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPT 490 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~Ps 490 (778)
.. ...+.+..+++..+++.+.+...
T Consensus 112 ~~---~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 112 PI---FRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred cc---cCHHHHHHHHHhcCceEEEEecc
Confidence 43 36788889999999998876553
No 188
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=32.40 E-value=3.5e+02 Score=30.81 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=53.0
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
..++.++|++....+-+... +..+++++..|+..+..+.. ..++.+...+++.+++.+++.+.....+
T Consensus 56 ~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 56 SLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPINAR---LLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEcCcc---cCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 46888999998888877643 45678889999998887643 3778899999999999998887655433
No 189
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=32.12 E-value=2.9e+02 Score=31.14 Aligned_cols=76 Identities=13% Similarity=0.228 Sum_probs=47.9
Q ss_pred HHHHcCCCCCCEEEEEeCCChHHHHHHH--HHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHH
Q 004034 248 YLKDIGVKKGDAVIIYLPMLMELPIAML--ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 325 (778)
Q Consensus 248 ~L~~~Gv~~Gd~Vai~~~~s~e~vva~L--A~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~ 325 (778)
.|..+ +++||.|.+-. ++......++ .+.+.|+.+..++.....+.++..|+. +.++|+...-.....+..++..
T Consensus 92 al~al-l~~GD~VI~~~-~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~ 168 (432)
T PRK06702 92 AVLNI-CSSGDHLLCSS-TVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKE 168 (432)
T ss_pred HHHHh-cCCCCEEEECC-CchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHH
Confidence 33344 78999876633 3333233332 357889998888887788889888865 6788887654333334445444
Q ss_pred H
Q 004034 326 I 326 (778)
Q Consensus 326 ~ 326 (778)
+
T Consensus 169 I 169 (432)
T PRK06702 169 F 169 (432)
T ss_pred H
Confidence 3
No 190
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=31.82 E-value=1.4e+02 Score=32.74 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=40.3
Q ss_pred HHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCC--CC---CCHHHHHHHHHhcCCcEEEEcC
Q 004034 248 YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--AG---FSSDSLAQRIMDCKPKVVITSN 312 (778)
Q Consensus 248 ~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~--p~---~~~~~l~~~l~~~~~~~iit~~ 312 (778)
.|+..++++||.|.+-.+..+ ....++...|+.++.++ +. ...+.++..+.. +.++|+...
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~ 127 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVH 127 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeC
Confidence 334457899999877655444 34456678898666654 33 457888887754 677777553
No 191
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=31.18 E-value=2.9e+02 Score=30.61 Aligned_cols=71 Identities=14% Similarity=0.283 Sum_probs=44.7
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHH
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 326 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~ 326 (778)
+++||.|.+..+.-....-.+-.+.+.|+.+..++++ .+.++..++..+.++|++..-....+...+++.+
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d--~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I 159 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPS--TEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEV 159 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECCC--HHHHHHhcCccCceEEEEECCCCCCCEecCHHHH
Confidence 6899998877655444443332334567766555553 5778877765578888876555555556665544
No 192
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=31.12 E-value=7e+02 Score=26.87 Aligned_cols=69 Identities=25% Similarity=0.315 Sum_probs=42.7
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCCEEE--eCCCC--CCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHH
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHS--VVFAG--FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 325 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~v--pl~p~--~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~ 325 (778)
+++||.|.+-.|.-. ....++...|+-.+ +++.+ ...+.+...+...++++|+.+.-....+...+.+.
T Consensus 97 ~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~ 169 (351)
T PRK14807 97 INKGDVVIYPHPSFA---MYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERED 169 (351)
T ss_pred cCCCCEEEEeCCChH---HHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHH
Confidence 578999987655432 23334556777544 44433 45678888877668888877654444555555433
No 193
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.10 E-value=2.9e+02 Score=32.21 Aligned_cols=88 Identities=10% Similarity=-0.025 Sum_probs=62.1
Q ss_pred EEEccchHHHH---HHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhC
Q 004034 405 VLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (778)
Q Consensus 405 V~~th~~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~ 481 (778)
-.+|.+.+... ++..+....++.++|++....+-+... +..+++.+..|+..+..+.. ..++.+..+++..+
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~--~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~ 111 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEH--LEVLFAVACMGAVFNPLNKQ---LMNDQIVHIINHAE 111 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCCEEeecccc---cCHHHHHHHHhccC
Confidence 34566654322 222332236888999988888876643 55678889999988887643 36788999999999
Q ss_pred ccEEEecHHHHHHHHh
Q 004034 482 VTIFYTAPTLVRSLMR 497 (778)
Q Consensus 482 vT~l~~~Ps~l~~L~~ 497 (778)
++.+++.+.....+..
T Consensus 112 ~~~~i~~~~~~~~~~~ 127 (576)
T PRK05620 112 DEVIVADPRLAEQLGE 127 (576)
T ss_pred CcEEEEChhhHHHHHH
Confidence 9999988876665543
No 194
>PRK07638 acyl-CoA synthetase; Validated
Probab=30.54 E-value=3.7e+02 Score=30.33 Aligned_cols=81 Identities=12% Similarity=0.157 Sum_probs=59.2
Q ss_pred ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChH-HHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 230 ~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e-~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
.-.+|.+.+...+...+ ...+++++|++....+-... .+..++..+..|+..+.. +.+.++++...+++.++.++
T Consensus 160 gv~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 235 (487)
T PRK07638 160 AFLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVM 235 (487)
T ss_pred EEEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEE
Confidence 34577777766554433 34578899999887765543 345667778889887754 56888999999999999999
Q ss_pred EEcCCc
Q 004034 309 ITSNAV 314 (778)
Q Consensus 309 it~~~~ 314 (778)
.+.+..
T Consensus 236 ~~~P~~ 241 (487)
T PRK07638 236 YTVPTM 241 (487)
T ss_pred EeCcHH
Confidence 987653
No 195
>PRK13383 acyl-CoA synthetase; Provisional
Probab=30.22 E-value=2.7e+02 Score=31.89 Aligned_cols=69 Identities=12% Similarity=0.014 Sum_probs=53.9
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHH
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 496 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~ 496 (778)
..++.++|++....+-.... +..+++.+..|+..+..+.. ..++.+..++++.+++.+++.+.....+.
T Consensus 79 ~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 147 (516)
T PRK13383 79 RDGVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTE---FRSDALAAALRAHHISTVVADNEFAERIA 147 (516)
T ss_pred hcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCcc---CCHHHHHHHHhcCCCCEEEEchhHHHHHH
Confidence 35788999988888765433 56678889999999988643 37788999999999999998887665543
No 196
>PRK05850 acyl-CoA synthetase; Validated
Probab=29.85 E-value=5e+02 Score=30.11 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=66.3
Q ss_pred CCCCcEEEEeC-CCC-CCCCceEEEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEE
Q 004034 385 DAEDPLFLLYT-SGS-TGKPKGVLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVV 459 (778)
Q Consensus 385 ~~~d~a~Il~T-SGS-TG~PKgV~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlv 459 (778)
.|+.+|.+... ++. .|. ...+|...+.... +..+. ..+ .++|++....+-+... +..+++++..|+..+
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~-~~g-~~gd~V~l~~~n~~~~--~~~~lA~~~~G~v~v 87 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELR-RHG-STGDRAVILAPQGLEY--IVAFLGALQAGLIAV 87 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHH-HhC-CCCCEEEEEcCCcccH--HHHHHHHHHcCceEE
Confidence 35666655321 111 122 2457777643222 22222 234 4689988888877543 567888999999999
Q ss_pred EEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 460 VFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 460 l~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
..+........+.+..+|+..++..+++.+.....+
T Consensus 88 pl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 88 PLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred ecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 886421123567889999999999999888766554
No 197
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=29.83 E-value=3.4e+02 Score=32.07 Aligned_cols=97 Identities=14% Similarity=-0.039 Sum_probs=65.3
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHH--HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.++.+|.+ +-+..+|. .-.+|.+.+.... ....-...++.++|++...++-.... +..+++++..|+..+...
T Consensus 65 ~p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~--v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA--VFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCCEEEecC
Confidence 35667755 43322332 2356777643222 12222346899999999998887543 567889999999988876
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAP 489 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~P 489 (778)
.. ..++.+...|+..++.++++..
T Consensus 140 ~~---~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GG---FASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CC---CCHHHHHHHHHhcCceEEEECC
Confidence 43 4778899999999999888753
No 198
>PRK06839 acyl-CoA synthetase; Validated
Probab=29.68 E-value=3.2e+02 Score=30.83 Aligned_cols=87 Identities=8% Similarity=-0.044 Sum_probs=61.3
Q ss_pred EEEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhC
Q 004034 405 VLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (778)
Q Consensus 405 V~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~ 481 (778)
..+|...+.... +..+....++.+++++....+-... ++..+++.+..|+..+..+.. ..++.+...+++.+
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~---~~~~~~~~~l~~~~ 100 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIR---LTENELIFQLKDSG 100 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcc---cCHHHHHHHHHhcC
Confidence 457777643322 2222223578899998888877654 356788889999998887643 36788889999999
Q ss_pred ccEEEecHHHHHHHH
Q 004034 482 VTIFYTAPTLVRSLM 496 (778)
Q Consensus 482 vT~l~~~Ps~l~~L~ 496 (778)
++.+++.+.....+.
T Consensus 101 ~~~i~~~~~~~~~~~ 115 (496)
T PRK06839 101 TTVLFVEKTFQNMAL 115 (496)
T ss_pred ceEEEEcHHHHHHHH
Confidence 999998887665543
No 199
>PLN02246 4-coumarate--CoA ligase
Probab=29.61 E-value=3.9e+02 Score=30.65 Aligned_cols=99 Identities=11% Similarity=-0.021 Sum_probs=65.6
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.++.++++.. . ++-.+|+..+...... ......++.++|++....+-+... +..+++++..|++.+..+
T Consensus 36 ~~~~~a~~~~---~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~ 106 (537)
T PLN02246 36 FSDRPCLIDG---A----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEF--VLAFLGASRRGAVTTTAN 106 (537)
T ss_pred CCCCeEEEec---C----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHHcCEEEecCC
Confidence 4677776532 1 1235777764333221 111246889999998887766533 556788888999998876
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
.. ...+.+..+++..++..+.+.......+
T Consensus 107 ~~---~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 107 PF---YTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CC---CCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 43 3678899999999999888776554443
No 200
>PLN02574 4-coumarate--CoA ligase-like
Probab=29.55 E-value=2.8e+02 Score=32.19 Aligned_cols=100 Identities=16% Similarity=0.105 Sum_probs=66.6
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHH---HHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
.++.++++- +.+|. .+|.+.+... ++..+....++.++|++....+-... +...+++++..|+..+..
T Consensus 52 ~~~~~a~~~---~~~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALID---SSTGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVY--FPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEE---CCCCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcch--HHHHHHHHHHhCeEEeCc
Confidence 456676653 22221 3566653222 22223322789999999888876643 355678899999998887
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHH
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 496 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~ 496 (778)
+.. ...+.+...+++.++..+++.+..+..+.
T Consensus 123 ~p~---~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 123 NPS---SSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred Ccc---cCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 643 36788889999999999888887666554
No 201
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=29.33 E-value=2.4e+02 Score=32.06 Aligned_cols=50 Identities=16% Similarity=0.040 Sum_probs=34.1
Q ss_pred HHcCCCCCCEEEEEeCCChHHHHHHHH-HHHhCCEEEeC--------------CCCCCHHHHHHHHHhcC
Q 004034 250 KDIGVKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVV--------------FAGFSSDSLAQRIMDCK 304 (778)
Q Consensus 250 ~~~Gv~~Gd~Vai~~~~s~e~vva~LA-~l~~Gav~vpl--------------~p~~~~~~l~~~l~~~~ 304 (778)
..+++++||.| .+..++.+.-| +...|++++=+ .-.+..+.++..|....
T Consensus 110 ~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 110 SRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 34689999965 33444445555 78889887733 34578899999988654
No 202
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=29.00 E-value=4.5e+02 Score=30.63 Aligned_cols=90 Identities=10% Similarity=-0.027 Sum_probs=65.6
Q ss_pred eEEEccchHHHHHHHHHHHh----hCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHH
Q 004034 404 GVLHTTGGYMVHTATTFKYA----FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDK 479 (778)
Q Consensus 404 gV~~th~~~l~~~~~~~~~~----~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~ 479 (778)
|..+|++.+........... .+++.+|++...+|-...+ ....+++++.|+.+.-... . .+...+...++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~--~~~~la~~~~Ga~~~~~Np--~-~~~~ei~~~~~~ 117 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF--VELALAVPMAGAVLNPLNP--R-LTASEIAKQLKD 117 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCccccccCc--c-cCHHHHHHHHHh
Confidence 78899887544433322222 2378899999999988765 4566788999998777653 3 488899999999
Q ss_pred hCccEEEecHHHHHHHHhc
Q 004034 480 YKVTIFYTAPTLVRSLMRD 498 (778)
Q Consensus 480 ~~vT~l~~~Ps~l~~L~~~ 498 (778)
-+.+++++....+..+...
T Consensus 118 s~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 118 SKPKLIFVDEDFYDKISEA 136 (537)
T ss_pred cCCeEEEEcCchHHHHHHH
Confidence 9999999987777666443
No 203
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=28.76 E-value=4e+02 Score=29.51 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=44.2
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCCE-EEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHH
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGAV-HSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 326 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav-~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~ 326 (778)
+++||.|.+..+.-....-.+....+.+++ ...++ ....+.+...+.. +.++|+.+.-....+...+++.+
T Consensus 88 ~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I 159 (386)
T PRK08045 88 LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKI 159 (386)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHH
Confidence 579999887766555444444445555653 33444 3567778777754 77888877655555666665544
No 204
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=28.46 E-value=3.5e+02 Score=30.59 Aligned_cols=51 Identities=20% Similarity=0.098 Sum_probs=35.8
Q ss_pred HHHcCCCCCCEEEEEeCCChHHHHHHHH-HHHhCCEEEeC--C------------CCCCHHHHHHHHHhcC
Q 004034 249 LKDIGVKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVV--F------------AGFSSDSLAQRIMDCK 304 (778)
Q Consensus 249 L~~~Gv~~Gd~Vai~~~~s~e~vva~LA-~l~~Gav~vpl--~------------p~~~~~~l~~~l~~~~ 304 (778)
|...++++||.| .+..++.+..| +...|++++=+ + -.+..+.++..|....
T Consensus 102 l~~l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 102 LSQIAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred HHHhCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 446689999977 34666666666 68888876655 2 2347889999888643
No 205
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=28.42 E-value=4.2e+02 Score=31.98 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=64.4
Q ss_pred CCCeEEEEEE-cCCCCc--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC--hHHHHHHHHHHHhCCEEEeCC
Q 004034 214 LGDKVAIYWE-ANDPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 288 (778)
Q Consensus 214 ~pd~~Al~~~-~~~~~~--~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s--~e~vva~LA~l~~Gav~vpl~ 288 (778)
.+|.+|++.. ...+|. +-.+|++.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 3456666543 222222 457899888776655543 34789999998888763 344556788899999877655
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcC
Q 004034 289 AGFSSDSLAQRIMDCKPKVVITSN 312 (778)
Q Consensus 289 p~~~~~~l~~~l~~~~~~~iit~~ 312 (778)
..+....+...+++.++..+...+
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p 463 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTS 463 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchH
Confidence 444556677788888888877554
No 206
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=28.39 E-value=3.5e+02 Score=31.22 Aligned_cols=70 Identities=17% Similarity=0.019 Sum_probs=56.1
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHh
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMR 497 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~ 497 (778)
..++.+++++....+-.... +..+++.+..|+..+..+.. ...+.+...+++.+++.+++.+.....+.+
T Consensus 65 ~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~---~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~ 134 (542)
T PRK06155 65 AAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTA---LRGPQLEHILRNSGARLLVVEAALLAALEA 134 (542)
T ss_pred HcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccc---cCHHHHHHHHHhcCceEEEEChhhHHHHHH
Confidence 45788999988888777654 56788999999999988653 367889999999999999998877666544
No 207
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=28.29 E-value=4e+02 Score=31.72 Aligned_cols=80 Identities=9% Similarity=-0.057 Sum_probs=59.1
Q ss_pred EEEccchHHHHH--HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCc
Q 004034 405 VLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (778)
Q Consensus 405 V~~th~~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~v 482 (778)
..+|.+.+.... .+..-...++.++|++...++..-.. +..+++++..|+..+..... ..++.+...|+..++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~---~~~~~l~~~l~~~~~ 165 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVLFDG---YSVKSLIDRIETITP 165 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCCC---CCHHHHHHHHHhcCC
Confidence 567777743222 11222346899999999999887654 56788899999998887643 478999999999999
Q ss_pred cEEEecH
Q 004034 483 TIFYTAP 489 (778)
Q Consensus 483 T~l~~~P 489 (778)
+++++..
T Consensus 166 ~~li~~~ 172 (647)
T PTZ00237 166 KLIITTN 172 (647)
T ss_pred CEEEEcc
Confidence 9988764
No 208
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=27.96 E-value=4.4e+02 Score=28.70 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=25.0
Q ss_pred hHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhC
Q 004034 445 SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (778)
Q Consensus 445 ~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~ 481 (778)
.+.+..+|++|.++++-...........+.+++.+..
T Consensus 110 ~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag 146 (367)
T cd06534 110 AWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAG 146 (367)
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcC
Confidence 5567789999999998765433334456667766654
No 209
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=27.96 E-value=2.8e+02 Score=32.08 Aligned_cols=96 Identities=13% Similarity=0.022 Sum_probs=64.6
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
.++.+|++.. | -.+|...+.... +..+....++.++|++....+-.... +..+++++..|++.+..
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY--PIATFGVLRAGLTVVNV 106 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEecc
Confidence 4667776532 1 246766643222 22222246889999988888776543 56778899999999987
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEecHHHHHH
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRS 494 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~ 494 (778)
+.. ..++.+...+.+.+++.+++.......
T Consensus 107 ~p~---~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 107 NPL---YTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred Ccc---CCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 643 366788899999999988887655443
No 210
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=27.93 E-value=8.1e+02 Score=27.17 Aligned_cols=73 Identities=19% Similarity=0.123 Sum_probs=45.7
Q ss_pred HHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCC--C-----CCCHHHHHHHHHhcCCcEEEEcCCcccC
Q 004034 245 LANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--A-----GFSSDSLAQRIMDCKPKVVITSNAVKRG 317 (778)
Q Consensus 245 lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~--p-----~~~~~~l~~~l~~~~~~~iit~~~~~~~ 317 (778)
+...+... +.+||.|.|..|.=+.+. -.+..+|+..++++ + ....++|...+.. +.|+|+.+.-....
T Consensus 102 l~~~~~a~-~~pGDeVlip~P~Y~~y~---~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPT 176 (393)
T COG0436 102 LFLAFLAL-LNPGDEVLIPDPGYPSYE---AAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPT 176 (393)
T ss_pred HHHHHHHh-cCCCCEEEEeCCCCcCHH---HHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCc
Confidence 33334333 678999888877655443 33556677655544 2 2346788888888 88888887665555
Q ss_pred Ccccc
Q 004034 318 PKAIH 322 (778)
Q Consensus 318 ~~~~~ 322 (778)
+...+
T Consensus 177 Gav~~ 181 (393)
T COG0436 177 GAVYS 181 (393)
T ss_pred CcCCC
Confidence 55444
No 211
>PRK09265 aminotransferase AlaT; Validated
Probab=27.89 E-value=8.2e+02 Score=26.94 Aligned_cols=65 Identities=15% Similarity=0.131 Sum_probs=35.9
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEe--CCCC----CCHHHHHHHHHhcCCcEEEEcCCcccCCcccc
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSV--VFAG----FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIH 322 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vp--l~p~----~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~ 322 (778)
+++||.|.+-.|.-..+ ..++...|+..+. ++.. ...+.+...+. .++++|+.+.-....+...+
T Consensus 116 ~~~gd~Vlv~~p~y~~~---~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~~ 186 (404)
T PRK09265 116 LNNGDEVLVPAPDYPLW---TAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYS 186 (404)
T ss_pred CCCCCEEEEeCCCCcCh---HHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCcCCC
Confidence 57899988876554432 2333456765554 4432 34667766654 35676555443434444454
No 212
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=27.88 E-value=81 Score=26.30 Aligned_cols=47 Identities=23% Similarity=0.365 Sum_probs=25.4
Q ss_pred eEEEEEEcCCCCcceeecHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEeCCC
Q 004034 217 KVAIYWEANDPGVDATLTYSQLLQ-QVCQLANYLKDIGVKKGDAVIIYLPML 267 (778)
Q Consensus 217 ~~Al~~~~~~~~~~~~lTY~eL~~-~v~~lA~~L~~~Gv~~Gd~Vai~~~~s 267 (778)
-+|++|++.--|..-+++=.|+.+ +..+++..|++.||+ |-+-..+|
T Consensus 15 ~I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~----v~L~~~~S 62 (86)
T PF09153_consen 15 WIAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS----VSLDEEPS 62 (86)
T ss_dssp EEEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EEEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce----eEEeecCC
Confidence 367777643112223344468777 999999999998764 44544443
No 213
>PRK05857 acyl-CoA synthetase; Validated
Probab=27.87 E-value=3.7e+02 Score=31.02 Aligned_cols=95 Identities=13% Similarity=-0.049 Sum_probs=64.3
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHHHHH--HHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT--FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.|+.+|.+.. .| ...+|.+.+....... .-...++.++|++....+-++.. +..+++.+..|+..+..+
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMAD 97 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecC
Confidence 4666665432 22 1347777743322211 12245788999999888877654 567888999999999886
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEecHHH
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTL 491 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~ 491 (778)
.. ..++.+..+++..++..++..+..
T Consensus 98 ~~---~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GN---LPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cc---CCHHHHHHHHHhcCCceEEEeccc
Confidence 43 367888899999888888777653
No 214
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=27.83 E-value=2.1e+02 Score=30.40 Aligned_cols=62 Identities=11% Similarity=0.131 Sum_probs=38.4
Q ss_pred HHHHHHHHhcCCccceEEEEEEecCCCCeEEEEEEEEcCCCCCC--HHHHHHHHHHHHhhcCCC
Q 004034 660 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS--EELRKSLVLAVRKQIGAF 721 (778)
Q Consensus 660 ~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~--~~l~~~l~~~l~~~Lp~~ 721 (778)
..+|++.+.++|+|.+.-=+-.........+-+.++..++.... .++.+++++.+++++|..
T Consensus 215 ~~~I~~~i~~~~~v~~v~~l~~~~~G~~~~v~v~i~v~~~~~~~e~h~i~~~ie~~l~~~~~~~ 278 (299)
T PRK09509 215 RQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQLHLEMEDNLPLVQAHMIADQVEQALLRRFPGS 278 (299)
T ss_pred HHHHHHHHHhCCCCcCceeeeeEeeCCeEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 46899999999988765544333322233445666666554322 345677888888887743
No 215
>PRK13391 acyl-CoA synthetase; Provisional
Probab=27.72 E-value=4.9e+02 Score=29.59 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=65.9
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEE
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~ 461 (778)
.|+.++.+...++ + .+|...+.... ...+ ...++.+++++....+-.... +..+++.+..|+..+..
T Consensus 10 ~p~~~a~~~~~~~-----~--~~ty~~l~~~~~~la~~L-~~~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-----E--VVTYRELDERSNRLAHLF-RSLGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-----C--EeeHHHHHHHHHHHHHHH-HHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEecc
Confidence 3566776654432 2 36666533222 2222 235788899998888777654 55678888899998887
Q ss_pred cCCCCCCChhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 462 ~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
+.. .+.+.+..++++.++..+.+.+.....+
T Consensus 80 ~~~---~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 80 NSH---LTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccc---cCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 643 3678899999999999988887655433
No 216
>PRK06164 acyl-CoA synthetase; Validated
Probab=27.54 E-value=4.4e+02 Score=30.25 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=67.5
Q ss_pred CCCeEEEEEEcC-CCCc--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCh-HHHHHHHHHHHhCCEEEeCCC
Q 004034 214 LGDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFA 289 (778)
Q Consensus 214 ~pd~~Al~~~~~-~~~~--~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~-e~vva~LA~l~~Gav~vpl~p 289 (778)
.++.++++.... ..|. ...+|.+.|...+..++..+ ++.++|++..++|.+- -.+..+++.+..|+..+.. +
T Consensus 179 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 179 DPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 456777776322 2222 34678888877666555444 6889999998887642 2335678888888877665 5
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCC
Q 004034 290 GFSSDSLAQRIMDCKPKVVITSNA 313 (778)
Q Consensus 290 ~~~~~~l~~~l~~~~~~~iit~~~ 313 (778)
.+...++...|++.++.+++..+.
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~ 278 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDE 278 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHH
Confidence 678889999999999999987654
No 217
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.12 E-value=3.1e+02 Score=31.49 Aligned_cols=86 Identities=9% Similarity=-0.027 Sum_probs=60.3
Q ss_pred EEccchHHHH---HHHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCc
Q 004034 406 LHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (778)
Q Consensus 406 ~~th~~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~v 482 (778)
.+|.+.+... .+..+...+++.+++++....+-... ++..+++++..|+..+..+.. ..++.+...+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~ 109 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQ--FVIAYYAILRANAVVVPVNPM---NREEELAHYVTDSGA 109 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChH--HHHHHHHHHHcCcEEeecCcC---cCHHHHHHHHHhCCC
Confidence 3666664322 22233333489999998888776643 356778889999999887643 367889999999999
Q ss_pred cEEEecHHHHHHHH
Q 004034 483 TIFYTAPTLVRSLM 496 (778)
Q Consensus 483 T~l~~~Ps~l~~L~ 496 (778)
+.+++.+.....+.
T Consensus 110 ~~ii~~~~~~~~~~ 123 (546)
T PRK08314 110 RVAIVGSELAPKVA 123 (546)
T ss_pred eEEEEccchhhhHH
Confidence 99988876655443
No 218
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=27.10 E-value=9.1e+02 Score=26.93 Aligned_cols=88 Identities=20% Similarity=0.152 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHH-HhCC--EEEeCCC--CCCHHHHHHHHHhcCCcEEEEcCCcc
Q 004034 241 QVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA-RIGA--VHSVVFA--GFSSDSLAQRIMDCKPKVVITSNAVK 315 (778)
Q Consensus 241 ~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l-~~Ga--v~vpl~p--~~~~~~l~~~l~~~~~~~iit~~~~~ 315 (778)
..+.+|..|... +++||.|.+---....-++...... +.|+ .++|++. .+..+.+.. +-+-+.++|..+....
T Consensus 96 aln~va~~l~~~-~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~-~i~~~Tklvais~vSn 173 (405)
T COG0520 96 ALNLVARGLGRS-LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEK-LITPKTKLVALSHVSN 173 (405)
T ss_pred HHHHHHHHhhhh-hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHH-hcCCCceEEEEECccc
Confidence 345555555433 7889988887766555555555555 4586 5566542 345566666 3445567777766655
Q ss_pred cCCcccchHHHHHHH
Q 004034 316 RGPKAIHLKDIVDAA 330 (778)
Q Consensus 316 ~~~~~~~~~~~~~~~ 330 (778)
-.+-..+++.+.+.+
T Consensus 174 ~tG~~~pv~~I~~la 188 (405)
T COG0520 174 VTGTVNPVKEIAELA 188 (405)
T ss_pred cccccchHHHHHHHH
Confidence 556666666654443
No 219
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=26.91 E-value=1.5e+02 Score=27.37 Aligned_cols=42 Identities=14% Similarity=0.030 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEeCC---ChHHHHHHHHHHHhCCE
Q 004034 242 VCQLANYLKDIGVKKGDAVIIYLPM---LMELPIAMLACARIGAV 283 (778)
Q Consensus 242 v~~lA~~L~~~Gv~~Gd~Vai~~~~---s~e~vva~LA~l~~Gav 283 (778)
..+++..|.++|+.+++.|.+|... ......+.+++-.+|--
T Consensus 80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 3567888999999999999999864 56666666777777753
No 220
>PRK07798 acyl-CoA synthetase; Validated
Probab=26.60 E-value=5.5e+02 Score=29.11 Aligned_cols=70 Identities=11% Similarity=-0.051 Sum_probs=53.2
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHHHh
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMR 497 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L~~ 497 (778)
..++.++|++....+-.... +..+++.+..|+..+..+.. ...+.+..++++.++..++........+.+
T Consensus 47 ~~g~~~~~~v~v~~~n~~~~--~~~~~a~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 116 (533)
T PRK07798 47 AQGLGPGDHVGIYARNRIEY--VEAMLGAFKARAVPVNVNYR---YVEDELRYLLDDSDAVALVYEREFAPRVAE 116 (533)
T ss_pred HcCCCCCCEEEEEcCCCHHH--HHHHHHHHhcCeEEEecCcC---CCHHHHHHHHhhcCCCEEEEchhhHHHHHH
Confidence 45788899988877766432 55678888999998887643 367889999999999999888776655544
No 221
>PRK15348 type III secretion system lipoprotein SsaJ; Provisional
Probab=26.55 E-value=3.2e+02 Score=28.29 Aligned_cols=70 Identities=14% Similarity=0.067 Sum_probs=45.1
Q ss_pred HHHHHHHHhcCCccceEEEEE-EecCCC---CeEE--EEEEEEcCCCCCCHHHHHHHHHHHHhhcCCCccccEEEECC
Q 004034 660 TAEVESALVSHPQCAEAAVVG-VEHEVK---GQGI--YAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP 731 (778)
Q Consensus 660 ~~eIE~~L~~~p~V~ea~Vv~-~~~~~~---~~~l--va~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~ 731 (778)
-+|+|+.|.++++|.+|-|-. .|++.. .+.. .+++..+++.+.+ ...-.|++.+...+|. +-|..|-+++
T Consensus 109 egELarTI~~idgV~~ArVhL~lP~~~~~~~~~~asASV~I~~~~~~~~~-~~~v~I~~LVA~SV~g-L~~enVTVvd 184 (249)
T PRK15348 109 EQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNME-AFRVKIKDLIEMSIPG-LQYSKISILM 184 (249)
T ss_pred HHHHHHHHHhCCCeeEeEEEEECCCCCcccCCCCccEEEEEEeCCCCChH-HHHHHHHHHHHHhcCC-CCccceEEEe
Confidence 389999999999999998843 343211 1223 3344445553332 2223799999999986 5577777665
No 222
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=26.30 E-value=1.1e+02 Score=25.30 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=34.7
Q ss_pred HHHHHc-CCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeC
Q 004034 247 NYLKDI-GVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 287 (778)
Q Consensus 247 ~~L~~~-Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl 287 (778)
.+|.+. |++.|+.++.+.....|.+.++=|.+|+.-+-+..
T Consensus 4 sYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~ 45 (87)
T cd07050 4 SYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELAT 45 (87)
T ss_pred hhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEe
Confidence 466654 99999999999999999999999999998654443
No 223
>PRK07503 methionine gamma-lyase; Provisional
Probab=26.20 E-value=4.2e+02 Score=29.47 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=42.8
Q ss_pred CCCCCEEEEEeCCChHHHH-HHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHH
Q 004034 254 VKKGDAVIIYLPMLMELPI-AMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 326 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vv-a~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~ 326 (778)
+++||.|.+-.+.-..... ...++.+.|+.+..++.. ..+++...+.. +.++|+...-....+...+++.+
T Consensus 101 l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I 172 (403)
T PRK07503 101 LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-DPAALKAAISD-KTRMVYFETPANPNMRLVDIAAV 172 (403)
T ss_pred cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC-CHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHH
Confidence 7899998775442222222 223455678887777664 56777777754 77888875444444555555443
No 224
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=25.99 E-value=3.8e+02 Score=30.44 Aligned_cols=98 Identities=16% Similarity=0.193 Sum_probs=67.7
Q ss_pred CCCeEEEEEEcC-CCC--cceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChH--HHHHHHHHHHhCCEEEeCC
Q 004034 214 LGDKVAIYWEAN-DPG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVF 288 (778)
Q Consensus 214 ~pd~~Al~~~~~-~~~--~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e--~vva~LA~l~~Gav~vpl~ 288 (778)
.++.+|.+.... ..| ....+|++.+...+.... ....+++++|++...+|.... +...+++.+..|+..+..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 356666654322 112 135678888766553322 234589999998887776543 3445677888999888777
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCC
Q 004034 289 AGFSSDSLAQRIMDCKPKVVITSNA 313 (778)
Q Consensus 289 p~~~~~~l~~~l~~~~~~~iit~~~ 313 (778)
+......+...|++.++.++++.+.
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~ 261 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPT 261 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchH
Confidence 7778899999999999999998764
No 225
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=25.58 E-value=3.5e+02 Score=35.55 Aligned_cols=99 Identities=15% Similarity=0.005 Sum_probs=63.9
Q ss_pred CCCCcEEEEeCCCCCCCCceEEEccchHHHHHH--HHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEc
Q 004034 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (778)
Q Consensus 385 ~~~d~a~Il~TSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~ 462 (778)
.|+.+|++...+...+......+|.+.+..... ...-...++.+++++....+-+... +..+++++..|+..+..+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vpld 326 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSVID 326 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEeccC
Confidence 467777764322111111234577777432221 1122245788999998888877543 567889999999998886
Q ss_pred CCCCCCChhHHHHHHHHhCccEEEec
Q 004034 463 GAPTYPDSGRSWDIVDKYKVTIFYTA 488 (778)
Q Consensus 463 ~~~~~~~~~~~~~~i~~~~vT~l~~~ 488 (778)
.. ..++++..+++..++..+.+.
T Consensus 327 p~---~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 327 PA---YPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CC---CcHHHHHHHHHhcCCCEEEEe
Confidence 43 367788888998888877654
No 226
>PLN03102 acyl-activating enzyme; Provisional
Probab=25.40 E-value=3.3e+02 Score=31.79 Aligned_cols=66 Identities=14% Similarity=0.094 Sum_probs=51.8
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHH
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVR 493 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~ 493 (778)
..++.++|++...++-.-. ++..+|+.+..|++++..+.. .+++.+..+++..+++.+++.+....
T Consensus 58 ~~Gl~~gd~Vai~~~n~~e--~~~~~la~~~~G~~~vpl~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (579)
T PLN03102 58 SLNITKNDVVSVLAPNTPA--MYEMHFAVPMAGAVLNPINTR---LDATSIAAILRHAKPKILFVDRSFEP 123 (579)
T ss_pred HcCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeecccc---CCHHHHHHHHhccCCeEEEEChhhHH
Confidence 3578999999888876543 355678889999998887643 47899999999999999988765543
No 227
>PF02878 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; InterPro: IPR005844 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain I found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 3I3W_B 1WQA_C 1KFQ_B 1KFI_A 2Z0F_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=24.93 E-value=4.6e+02 Score=24.02 Aligned_cols=80 Identities=23% Similarity=0.237 Sum_probs=59.1
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEe---CCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCc--
Q 004034 232 TLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYL---PMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPK-- 306 (778)
Q Consensus 232 ~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~---~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~-- 306 (778)
.+|-.-+..-+..++.++.+. ..+.+|.|-. +.|..+.-++.+++++-++-|..-.-.+...+.+.+.+.++.
T Consensus 17 ~lt~~~~~~~~~a~~~~~~~~--~~~~~VvVg~D~R~~s~~~~~~~~~~l~~~G~~V~~~g~~~tP~~~~~~~~~~~~gg 94 (137)
T PF02878_consen 17 ELTPEFAARLAQAFASYLKEK--GNGSRVVVGRDTRPSSPMLAKALAAGLRANGVDVIDIGLVPTPALSFAIRQLNADGG 94 (137)
T ss_dssp TBSHHHHHHHHHHHHHHHHHT--TTSSEEEEEE-SSTTHHHHHHHHHHHHHHTTEEEEEEEEB-HHHHHHHHHHHTESEE
T ss_pred CCCHHHHHHHHHHHHHhhccc--CCCCeEEEEEcccCCHHHHHHHHHHHHhhcccccccccccCcHHhhhhcccccccee
Confidence 389999999999999999987 5677788877 455677778888888877666655567888889988886555
Q ss_pred EEEEcCC
Q 004034 307 VVITSNA 313 (778)
Q Consensus 307 ~iit~~~ 313 (778)
+.||.+.
T Consensus 95 i~iTaSh 101 (137)
T PF02878_consen 95 IMITASH 101 (137)
T ss_dssp EEE--TT
T ss_pred eEEEecC
Confidence 6666544
No 228
>KOG2104 consensus Nuclear transport factor 2 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.67 E-value=60 Score=28.97 Aligned_cols=99 Identities=13% Similarity=0.222 Sum_probs=50.1
Q ss_pred HHHHHHHhCCCCcceecccccccccceecc--cCCCCCCCCCCCcCcCcCCceEEEECCCCceeCCC-----eeeEEEEe
Q 004034 526 WRWFFNVVGDSRCPISDTWWQTETGGFMIT--PLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE-----CSGYLCIK 598 (778)
Q Consensus 526 ~~~~~~~~g~~~~~i~~~YG~TE~g~~~~~--~~~~~~~~~~~~~G~p~~g~~~~Ivd~~g~~~~~g-----~~GEL~v~ 598 (778)
....+..|...+..+.+.|-.+ +...+- ...+.......-...|+.-++-.|-.-+-+|.+.| +.|.|-+.
T Consensus 14 vqhYY~~FD~dR~ql~~lY~~~--S~LTfEGqq~qG~~~IveKl~sLpFqkiqh~IttvD~QPt~~g~ilv~V~G~Lk~d 91 (126)
T KOG2104|consen 14 VQHYYSLFDNDRSQLGALYIDT--SMLTFEGQQIQGKDAIVEKLTSLPFQKIQHSITTVDSQPTPDGGILVMVVGQLKLD 91 (126)
T ss_pred HHHHHHHhcCchhHhhhhhccc--ceeeEcchhhcchHHHHHHHhcCChhhhhceeeecccccCCCCcEEEEEeeeeeec
Confidence 3444555655556678888766 222221 11111000001134566666666655456777766 23333332
Q ss_pred cCCCcccccccCChhhhhhhccCC-C--CCeEEcCcEEEEe
Q 004034 599 SSWPGAFRTLYGDHERYETTYFKP-F--PGYYFTGDGCSRD 636 (778)
Q Consensus 599 g~~p~v~~gY~~~~~~~~~~~~~~-~--~G~yrTGDl~~~~ 636 (778)
- +.+.+|.+.|.-. . +.||++.|+.|.+
T Consensus 92 E----------d~~~~FsQvF~L~~n~~~~~~v~ndiFRLn 122 (126)
T KOG2104|consen 92 E----------DPILRFSQVFLLKPNIQGSYYVFNDIFRLN 122 (126)
T ss_pred c----------CCccceeeEEEEeEcCCCCEEEEeeeEEEe
Confidence 1 2234566666522 2 3499999999875
No 229
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.49 E-value=3.1e+02 Score=31.56 Aligned_cols=81 Identities=16% Similarity=0.083 Sum_probs=55.4
Q ss_pred eeecHHHHHHHHHHHHHHH-HHcCCCCCCEEEEEeCCChHH-HHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEE
Q 004034 231 ATLTYSQLLQQVCQLANYL-KDIGVKKGDAVIIYLPMLMEL-PIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L-~~~Gv~~Gd~Vai~~~~s~e~-vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~i 308 (778)
..+|...+...+ .+..+ ...++.++|++..++|-.-.+ ...+++.+..|+..+...+.+.++.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 456666654322 22223 245788999998877654322 22346778899877766677889999999999999998
Q ss_pred EEcCC
Q 004034 309 ITSNA 313 (778)
Q Consensus 309 it~~~ 313 (778)
...+.
T Consensus 272 ~~~P~ 276 (539)
T PRK07008 272 AGVPT 276 (539)
T ss_pred EechH
Confidence 87654
No 230
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=24.43 E-value=70 Score=25.85 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=16.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEE
Q 004034 243 CQLANYLKDIGVKKGDAVIIY 263 (778)
Q Consensus 243 ~~lA~~L~~~Gv~~Gd~Vai~ 263 (778)
.-+-..|++.|+++||.|-|.
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 43 LGVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred CCHHHHHHHcCCCCCCEEEEc
Confidence 335556788899999999875
No 231
>PRK07867 acyl-CoA synthetase; Validated
Probab=24.42 E-value=4.7e+02 Score=30.06 Aligned_cols=84 Identities=10% Similarity=-0.032 Sum_probs=57.9
Q ss_pred EEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCc
Q 004034 406 LHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (778)
Q Consensus 406 ~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~v 482 (778)
.+|...+.... +..+....+..+++++....+-... ++..+++++..|+.++..+.. ..++.+..++++.++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~ 102 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPE--FSLLLGAAALSGIVPVGLNPT---RRGAALARDIAHADC 102 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCCEEEEecCC---CChHHHHHHHHhCCC
Confidence 46666643322 2223322356778887777776543 356788999999999988643 367889999999999
Q ss_pred cEEEecHHHHHH
Q 004034 483 TIFYTAPTLVRS 494 (778)
Q Consensus 483 T~l~~~Ps~l~~ 494 (778)
+.+++.......
T Consensus 103 ~~li~~~~~~~~ 114 (529)
T PRK07867 103 QLVLTESAHAEL 114 (529)
T ss_pred eEEEECHhHHHH
Confidence 999988766553
No 232
>PRK08316 acyl-CoA synthetase; Validated
Probab=24.41 E-value=3.7e+02 Score=30.48 Aligned_cols=86 Identities=14% Similarity=-0.006 Sum_probs=60.6
Q ss_pred EEEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhC
Q 004034 405 VLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (778)
Q Consensus 405 V~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~ 481 (778)
..+|...+.... +..+. ..++.++|++....+-.... ...+++++..|+..+..+.. ...+.+..++++.+
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~-~~gi~~~~~V~l~~~~~~~~--~~~~~a~~~~G~~~v~l~~~---~~~~~i~~~l~~~~ 108 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALL-DLGLKKGDRVAALGHNSDAY--ALLWLACARAGAVHVPVNFM---LTGEELAYILDHSG 108 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEecccc---cCHHHHHHHHHhCC
Confidence 346666643222 22222 35788999998888877653 56778899999998887643 36788889999999
Q ss_pred ccEEEecHHHHHHHH
Q 004034 482 VTIFYTAPTLVRSLM 496 (778)
Q Consensus 482 vT~l~~~Ps~l~~L~ 496 (778)
+..+++.......+.
T Consensus 109 ~~~ii~~~~~~~~~~ 123 (523)
T PRK08316 109 ARAFLVDPALAPTAE 123 (523)
T ss_pred CCEEEEccchHHHHH
Confidence 999988877665543
No 233
>PRK06188 acyl-CoA synthetase; Validated
Probab=24.29 E-value=5.9e+02 Score=29.00 Aligned_cols=79 Identities=10% Similarity=0.026 Sum_probs=60.8
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEE
Q 004034 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVIT 310 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit 310 (778)
..+|++.+...+.. .....++..+|++...+|-+..+...+++.+..|+..+..+ .+.++++...+++.++.+++.
T Consensus 186 v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 45778777765543 33456788999999999888766667788888898777664 567899999999999999987
Q ss_pred cCC
Q 004034 311 SNA 313 (778)
Q Consensus 311 ~~~ 313 (778)
.+.
T Consensus 262 ~P~ 264 (524)
T PRK06188 262 VPT 264 (524)
T ss_pred hHH
Confidence 654
No 234
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=24.07 E-value=6.5e+02 Score=26.16 Aligned_cols=85 Identities=12% Similarity=0.055 Sum_probs=59.9
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEe-CCChHHHHHHHHHHHhCC--EEEeCCCC-------CCHHHHHHHH
Q 004034 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYL-PMLMELPIAMLACARIGA--VHSVVFAG-------FSSDSLAQRI 300 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~-~~s~e~vva~LA~l~~Ga--v~vpl~p~-------~~~~~l~~~l 300 (778)
-...-..+++.+-..|-.|++.+ +-|.++++.+ |...+..-++--++..|+ .+..-+.. ..+..|+..+
T Consensus 30 ~~~~iN~~D~~AlE~Alrlke~~-~g~~Vtvvs~Gp~~a~~~~~lr~aLAmGaD~avli~d~~~~g~D~~~tA~~La~ai 108 (256)
T PRK03359 30 ADAKISQYDLNAIEAACQLKQQA-AEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAA 108 (256)
T ss_pred CccccChhhHHHHHHHHHHhhhc-CCCEEEEEEECCcchhhHHHHHHHHHcCCCEEEEEecCcccCcCHHHHHHHHHHHH
Confidence 34556888999999999999863 1267777777 444455567778888897 33333332 3366788888
Q ss_pred HhcCCcEEEEcCCccc
Q 004034 301 MDCKPKVVITSNAVKR 316 (778)
Q Consensus 301 ~~~~~~~iit~~~~~~ 316 (778)
+..++++|||-.....
T Consensus 109 ~~~~~DLVl~G~~s~D 124 (256)
T PRK03359 109 QKAGFDLILCGDGSSD 124 (256)
T ss_pred HHhCCCEEEEcCcccc
Confidence 8889999999876543
No 235
>PRK06234 methionine gamma-lyase; Provisional
Probab=24.04 E-value=5.7e+02 Score=28.38 Aligned_cols=72 Identities=18% Similarity=0.166 Sum_probs=45.6
Q ss_pred CCCCCEEEEEeCCChHHHHHH-HHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHH
Q 004034 254 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 327 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~-LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~ 327 (778)
+++||.|.+..+.-......+ .++.+.|+.++.++.. ..++++..+.+ +.++|+++.-....+...+++.+.
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~ 172 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-NLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAIS 172 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-CHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHH
Confidence 579998877665433333332 3456688887777764 56777777754 577888765555555666655443
No 236
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=23.99 E-value=5.1e+02 Score=28.91 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=26.5
Q ss_pred hHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhC
Q 004034 445 SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (778)
Q Consensus 445 ~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~ 481 (778)
++.+..+|+.|.++++-...........+.+++.+..
T Consensus 114 ~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag 150 (432)
T cd07078 114 AWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAG 150 (432)
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcC
Confidence 4567789999999998765433334567778888755
No 237
>PRK07514 malonyl-CoA synthase; Validated
Probab=23.97 E-value=3.8e+02 Score=30.33 Aligned_cols=68 Identities=13% Similarity=0.041 Sum_probs=52.8
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
..++.++|++....+-... ....+++.+..|+..+..+.. ..+..+..+++..+++.+.+.+.....+
T Consensus 47 ~~g~~~gd~v~i~~~~~~e--~~v~~la~~~~G~~~v~l~~~---~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 114 (504)
T PRK07514 47 ALGVKPGDRVAVQVEKSPE--ALALYLATLRAGAVFLPLNTA---YTLAELDYFIGDAEPALVVCDPANFAWL 114 (504)
T ss_pred HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEEECCCC---CCHHHHHHHHHhCCCcEEEEccchhHHH
Confidence 4578899998888877653 356778899999998887643 3678889999999999988887665544
No 238
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.69 E-value=4.1e+02 Score=30.78 Aligned_cols=68 Identities=12% Similarity=-0.014 Sum_probs=53.5
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHHHH
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~~L 495 (778)
..++.++|++....+-.... +..+++.+..|+..+..+.. ..++.+...+.+.++..+++....+..+
T Consensus 76 ~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 76 ALGVRPGDRVAIVLPNCPQH--IVAFYAVLRLGAVVVEHNPL---YTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred HhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCcC---CCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 45788999998888776543 56778889999999887643 3788999999999999998877765544
No 239
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=23.62 E-value=3.8e+02 Score=22.87 Aligned_cols=62 Identities=19% Similarity=0.207 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCC---------CCCCEEEEEe-CCChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHH
Q 004034 239 LQQVCQLANYLKDIGV---------KKGDAVIIYL-PMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRI 300 (778)
Q Consensus 239 ~~~v~~lA~~L~~~Gv---------~~Gd~Vai~~-~~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l 300 (778)
-+|...+...+.+.|. ++-|.|.|+= |....+..+.|++...|.+-.-.-+.++.+++..++
T Consensus 19 ~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 19 PDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIV 90 (91)
T ss_pred HHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHh
Confidence 4455555555556663 4677787777 555556668888889998777777888888887765
No 240
>PRK10595 SOS cell division inhibitor; Provisional
Probab=23.26 E-value=2.6e+02 Score=26.93 Aligned_cols=65 Identities=14% Similarity=0.103 Sum_probs=43.7
Q ss_pred HHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCC--C-CCCHHH---HHHHHHhcCCcEEEE
Q 004034 246 ANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--A-GFSSDS---LAQRIMDCKPKVVIT 310 (778)
Q Consensus 246 A~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~--p-~~~~~~---l~~~l~~~~~~~iit 310 (778)
+.+|.+.|+..+..+.|...+..+.+-+|-=|++.|..-+.|- | ....+. |...-+..++-.++.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 4588899999887777777788899999999999997443332 3 555443 333344444444443
No 241
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=23.19 E-value=2.7e+02 Score=30.67 Aligned_cols=64 Identities=19% Similarity=0.231 Sum_probs=40.5
Q ss_pred HHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCC--CC---CCHHHHHHHHHhcCCcEEEEc
Q 004034 244 QLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--AG---FSSDSLAQRIMDCKPKVVITS 311 (778)
Q Consensus 244 ~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~--p~---~~~~~l~~~l~~~~~~~iit~ 311 (778)
.+...|..+++++||.|.+-.+. +.....++...|+.++.++ ++ ...+.++..+.. +.++|+..
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~ 128 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPV 128 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEe
Confidence 34445566788999987765443 3334456677898666554 32 467788877754 56777643
No 242
>PRK08308 acyl-CoA synthetase; Validated
Probab=22.99 E-value=4.7e+02 Score=28.76 Aligned_cols=96 Identities=8% Similarity=0.148 Sum_probs=65.7
Q ss_pred CCCeEEEEEEcC-CCCc--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCh--HHHHHHHHHHHhCCEEEeCC
Q 004034 214 LGDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVF 288 (778)
Q Consensus 214 ~pd~~Al~~~~~-~~~~--~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s~--e~vva~LA~l~~Gav~vpl~ 288 (778)
.++..+++.... ..|. ...+|++.+...+..+.. ..++.++|++...+|..- .++..++..+..|+..+..+
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 445556554321 2222 456899988876655554 346788998888877653 34567888999998776654
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCC
Q 004034 289 AGFSSDSLAQRIMDCKPKVVITSNA 313 (778)
Q Consensus 289 p~~~~~~l~~~l~~~~~~~iit~~~ 313 (778)
...++.+...++..++.+++..+.
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~ 199 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPL 199 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHH
Confidence 466788888999999998886654
No 243
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=22.75 E-value=6.9e+02 Score=26.78 Aligned_cols=90 Identities=14% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCChHH-HHHHHHHHHhCCEEEeCCCC--CCHHHHHHHHHhcCCcEEEEcCCcccCC
Q 004034 242 VCQLANYLKDIGVKKGDAVIIYLPMLMEL-PIAMLACARIGAVHSVVFAG--FSSDSLAQRIMDCKPKVVITSNAVKRGP 318 (778)
Q Consensus 242 v~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~-vva~LA~l~~Gav~vpl~p~--~~~~~l~~~l~~~~~~~iit~~~~~~~~ 318 (778)
...+...+... +++||.|.+..+..... ...+.....+-.+++++++. ...+.++..+++.++++|+.+......+
T Consensus 60 t~al~~~~~~~-~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G 138 (356)
T cd06451 60 TGAMEAALSNL-LEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTG 138 (356)
T ss_pred HHHHHHHHHHh-CCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcc
Q ss_pred cccchHHHHHHHHH
Q 004034 319 KAIHLKDIVDAALD 332 (778)
Q Consensus 319 ~~~~~~~~~~~~~~ 332 (778)
...++..+..-+.+
T Consensus 139 ~~~~~~~i~~~a~~ 152 (356)
T cd06451 139 VLNPLEGIGALAKK 152 (356)
T ss_pred cccCHHHHHHHHHh
No 244
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=22.54 E-value=2.5e+02 Score=31.72 Aligned_cols=58 Identities=22% Similarity=0.284 Sum_probs=38.4
Q ss_pred HcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCCC-----CCHHHHHHHHHhcCCcEEEEcC
Q 004034 251 DIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSN 312 (778)
Q Consensus 251 ~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p~-----~~~~~l~~~l~~~~~~~iit~~ 312 (778)
+.++++||.|.+-.+.. .....++...|+.+++++.+ ...+.++..+.. +.++|+...
T Consensus 105 ~~~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~ 167 (438)
T PRK15407 105 DRALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAH 167 (438)
T ss_pred ccCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeC
Confidence 34899999987765544 44455667789876665432 456777777653 667777764
No 245
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=22.36 E-value=4.2e+02 Score=30.68 Aligned_cols=82 Identities=12% Similarity=0.026 Sum_probs=55.9
Q ss_pred EEEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhC
Q 004034 405 VLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (778)
Q Consensus 405 V~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~ 481 (778)
..+|...+.... +..+....++.++|++....+-.... +..+++++..|+..+..... ...+.+..++++-+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~--~~~~la~~~~G~v~v~~~~~---~~~~~l~~~l~~~~ 122 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY--PIAVFGALRAGLIVVNTNPL---YTAREMRHQFKDSG 122 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeccCcc---CCHHHHHHHHhccC
Confidence 356766642222 22222223788999998888776543 56778899999888877542 36788999999999
Q ss_pred ccEEEecHHH
Q 004034 482 VTIFYTAPTL 491 (778)
Q Consensus 482 vT~l~~~Ps~ 491 (778)
+..+.+.+.+
T Consensus 123 ~~~~i~~~~~ 132 (562)
T PRK12492 123 ARALVYLNMF 132 (562)
T ss_pred ceEEEecccc
Confidence 9988776543
No 246
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=22.03 E-value=5.7e+02 Score=26.83 Aligned_cols=69 Identities=16% Similarity=0.228 Sum_probs=42.4
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCC----------CCCHHHHHHHHHh-cCCcEEEEcCCcccCCcccc
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----------GFSSDSLAQRIMD-CKPKVVITSNAVKRGPKAIH 322 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p----------~~~~~~l~~~l~~-~~~~~iit~~~~~~~~~~~~ 322 (778)
+++||.|.+.-+...- .+-++...|+.++.+.+ ....+.++..++. .++++++.+... ..+...+
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~-~~G~~~d 171 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPT-YYGICYN 171 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCC-CCCEecC
Confidence 5799988776543322 23455667886665543 3568889888875 567876665433 3445555
Q ss_pred hHHH
Q 004034 323 LKDI 326 (778)
Q Consensus 323 ~~~~ 326 (778)
++.+
T Consensus 172 l~~I 175 (294)
T cd00615 172 LRKI 175 (294)
T ss_pred HHHH
Confidence 5443
No 247
>PLN02479 acetate-CoA ligase
Probab=21.74 E-value=5.3e+02 Score=29.89 Aligned_cols=66 Identities=11% Similarity=-0.001 Sum_probs=52.3
Q ss_pred hhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCccEEEecHHHHH
Q 004034 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVR 493 (778)
Q Consensus 423 ~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT~l~~~Ps~l~ 493 (778)
..++.++|++....+-.... +..+++.+..|+..+..+.. ...+.+..++++.++..+++.+..+.
T Consensus 64 ~~g~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~ 129 (567)
T PLN02479 64 KRSIGPGSTVAVIAPNIPAM--YEAHFGVPMAGAVVNCVNIR---LNAPTIAFLLEHSKSEVVMVDQEFFT 129 (567)
T ss_pred HcCCCCCCEEEEECCCcHHH--HHHHHHHHhCCcEEEEeccc---cCHHHHHHHHhhcCceEEEEchhhhh
Confidence 45889999998888876543 56678899999998888653 36788999999999999988776543
No 248
>PRK07050 cystathionine beta-lyase; Provisional
Probab=21.73 E-value=1.1e+03 Score=26.02 Aligned_cols=59 Identities=15% Similarity=0.004 Sum_probs=37.5
Q ss_pred CCCCCEEEEEeCCChHHHHHH-HHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCc
Q 004034 254 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAV 314 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~-LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~ 314 (778)
+++||.|.+-.+.-......+ ..+.+.|+-+..+++. ..+.++..++ -+.++|+.+.-.
T Consensus 101 ~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~-~~~~l~~~i~-~~tklV~le~p~ 160 (394)
T PRK07050 101 VKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL-IGAGIADLIQ-PNTRLIWLEAPG 160 (394)
T ss_pred hCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC-CHHHHHHhcC-CCCeEEEEECCC
Confidence 689999888776555444322 2345668888777764 3456666664 367888766443
No 249
>PRK08162 acyl-CoA synthetase; Validated
Probab=21.66 E-value=4.1e+02 Score=30.50 Aligned_cols=84 Identities=8% Similarity=-0.026 Sum_probs=59.9
Q ss_pred EEccchHHHHH---HHHHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCc
Q 004034 406 LHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (778)
Q Consensus 406 ~~th~~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~v 482 (778)
.+|.+.+.... +..+ ...++.++|++....+-.... +..+++.+..|+..+..+.. ...+.+..++++.++
T Consensus 43 ~~ty~~L~~~~~~~a~~L-~~~g~~~g~~v~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~---~~~~~~~~~l~~~~~ 116 (545)
T PRK08162 43 RRTWAETYARCRRLASAL-ARRGIGRGDTVAVLLPNIPAM--VEAHFGVPMAGAVLNTLNTR---LDAASIAFMLRHGEA 116 (545)
T ss_pred EEEHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEEeccccc---cChHHHHHHHHhCCC
Confidence 46777643221 2222 235788999998888877643 56778889999988877543 367889999999999
Q ss_pred cEEEecHHHHHHH
Q 004034 483 TIFYTAPTLVRSL 495 (778)
Q Consensus 483 T~l~~~Ps~l~~L 495 (778)
+.+++.+.....+
T Consensus 117 ~~i~~~~~~~~~~ 129 (545)
T PRK08162 117 KVLIVDTEFAEVA 129 (545)
T ss_pred eEEEEccchhhHH
Confidence 9998887665544
No 250
>KOG0883 consensus Cyclophilin type, U box-containing peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=21.65 E-value=73 Score=34.43 Aligned_cols=59 Identities=36% Similarity=0.642 Sum_probs=42.2
Q ss_pred EeeCce---eeeccccCCCCCCCccc-cccccCCCCCCCCCCccceeeecCCCceEEEeccCCcCCC
Q 004034 16 YYNNNV---CLSNLGVGGGASRGSTV-GASSYSKPLNKSSSPPLKLIRQSGGGGAVVMASSGCNNNN 78 (778)
Q Consensus 16 ~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (778)
||||-. -+.|+-+-||--.|+-- |-|-+.||....--|+|+ .-|-|.+-||-||=|.|-
T Consensus 313 YYnnt~FHRsIrnFmiQGGDPTGTG~GGeSiWgKpFkDEf~~~l~----H~gRGvlSMANsGpnTNg 375 (518)
T KOG0883|consen 313 YYNNTIFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDEFCSNLS----HDGRGVLSMANSGPNTNG 375 (518)
T ss_pred cccchHHHHHHHHHeeeCCCCCCCCCCCccccCCccccccCCCCC----cCCcceEeeccCCCCCCC
Confidence 556543 35678887877766654 456678999888888876 357789999988876543
No 251
>PRK06855 aminotransferase; Validated
Probab=21.26 E-value=9.3e+02 Score=26.92 Aligned_cols=67 Identities=13% Similarity=0.026 Sum_probs=39.6
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCC--EEEeCCCC----CCHHHHHHHHHhc-CCcEEEEcCCcccCCcccc
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGA--VHSVVFAG----FSSDSLAQRIMDC-KPKVVITSNAVKRGPKAIH 322 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Ga--v~vpl~p~----~~~~~l~~~l~~~-~~~~iit~~~~~~~~~~~~ 322 (778)
+.+||.|++--|.-+.+. ..+...+|+ +.+++++. ...+.++..+... +.++++...-....+...+
T Consensus 116 ~~~Gd~Vlv~~P~Y~~~~--~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s 189 (433)
T PRK06855 116 LRREARVIGPSPAYSTHS--SAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYP 189 (433)
T ss_pred cCCCCeEEEeCCCCchHH--HHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCC
Confidence 468999998877666532 233455677 44566542 3678888887643 4565554433344444444
No 252
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=21.14 E-value=3.7e+02 Score=29.41 Aligned_cols=67 Identities=18% Similarity=0.196 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEe--CCC---CCCHHHHHHHHHh---cCCcEEEEcC
Q 004034 243 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSV--VFA---GFSSDSLAQRIMD---CKPKVVITSN 312 (778)
Q Consensus 243 ~~lA~~L~~~Gv~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vp--l~p---~~~~~~l~~~l~~---~~~~~iit~~ 312 (778)
..+...++.+++++||.|.+-.+. +....-++...|+.++. +++ ....+.++..++. -+.++|+...
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~ 129 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD 129 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC
Confidence 334445566688999997766554 33445667788985554 433 2567888888874 4567776543
No 253
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=21.01 E-value=70 Score=25.85 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=17.9
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 004034 232 TLTYSQLLQQVCQLANYLKDIGVKKGDAVII 262 (778)
Q Consensus 232 ~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai 262 (778)
.+.|=+-.-+..-+-..|++.|++.||.|-|
T Consensus 32 ~~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 32 SLRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp GHHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 3444333344445566788889999999976
No 254
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=21.01 E-value=3.4e+02 Score=31.46 Aligned_cols=74 Identities=19% Similarity=0.204 Sum_probs=56.9
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeC--CChHHHHHHHHHHHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEE
Q 004034 232 TLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLP--MLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 309 (778)
Q Consensus 232 ~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~--~s~e~vva~LA~l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~ii 309 (778)
.+|+......+.- .....|+++.|+|-+.|| .+.-.++.+-+|+..|+..| |...+++...-.--...++.++-
T Consensus 261 vith~r~~~~a~g---~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 261 VITHLRYLQGAAG---FYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHHHHHHHH---HHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeee
Confidence 4666555544332 344569999999999997 56788899999999998855 68999999988888888887764
No 255
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=20.96 E-value=5.9e+02 Score=28.34 Aligned_cols=72 Identities=14% Similarity=0.083 Sum_probs=41.6
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHH-HHhCCEEEeCCCCCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHHHH
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLAC-ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 327 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~-l~~Gav~vpl~p~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~~~ 327 (778)
+++||.|.+..+.-......+-.+ .+.|..++.++. ...+.+...++. +.++|+.+.-....+...+++.+.
T Consensus 96 l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~-~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~ 168 (405)
T PRK08776 96 LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL-TDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVI 168 (405)
T ss_pred hCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC-CCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHH
Confidence 579999887655444333222222 245666666654 356777777754 678887765544445555554443
No 256
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.91 E-value=7.7e+02 Score=28.42 Aligned_cols=99 Identities=21% Similarity=0.244 Sum_probs=70.0
Q ss_pred CCCeEEEEEEcC-CCC--cceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC--hHHHHHHHHHHHhCCEEEeCC
Q 004034 214 LGDKVAIYWEAN-DPG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 288 (778)
Q Consensus 214 ~pd~~Al~~~~~-~~~--~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s--~e~vva~LA~l~~Gav~vpl~ 288 (778)
.|+.+|++.... .+| .+..+|++.+...+..+...+... +++.|++...+|-. .-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 367777664321 111 245689999998877777665321 78889878788765 455667888889999888877
Q ss_pred C-CCCHHHHHHHHHhcCCcEEEEcCC
Q 004034 289 A-GFSSDSLAQRIMDCKPKVVITSNA 313 (778)
Q Consensus 289 p-~~~~~~l~~~l~~~~~~~iit~~~ 313 (778)
+ .+.++.+...+...++..+...+.
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt 273 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPT 273 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchH
Confidence 5 699999999999888666665543
No 257
>PRK13388 acyl-CoA synthetase; Provisional
Probab=20.76 E-value=5.6e+02 Score=29.49 Aligned_cols=85 Identities=9% Similarity=-0.085 Sum_probs=58.8
Q ss_pred EEccchHHHHHHHH--HHHhhCC-CCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCc
Q 004034 406 LHTTGGYMVHTATT--FKYAFDY-KPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (778)
Q Consensus 406 ~~th~~~l~~~~~~--~~~~~~~-~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~v 482 (778)
.+|...+....... .-...++ .++|++...++-.... +..+++++..|+..+..+.. ...+.+..++++.++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~--v~~~lA~~~~Ga~~v~l~p~---~~~~~l~~~l~~~~~ 100 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM--LFWLAAAALGGYVLVGLNTT---RRGAALAADIRRADC 100 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH--HHHHHHHHhCCCEEEEeccc---CChHHHHHHHHhcCC
Confidence 56777643322211 1123467 6889988888876653 55678899999999988653 366888999999999
Q ss_pred cEEEecHHHHHHH
Q 004034 483 TIFYTAPTLVRSL 495 (778)
Q Consensus 483 T~l~~~Ps~l~~L 495 (778)
+.+++.......+
T Consensus 101 ~~~i~~~~~~~~~ 113 (540)
T PRK13388 101 QLLVTDAEHRPLL 113 (540)
T ss_pred CEEEEChhhhHHH
Confidence 9988876655443
No 258
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=20.61 E-value=7.6e+02 Score=27.85 Aligned_cols=89 Identities=9% Similarity=-0.002 Sum_probs=48.5
Q ss_pred EEEEeCCcchhhh-hhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCc--cEEEecH----HHHHHHHhcCCccc
Q 004034 431 VYWCTADCGWITG-HSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV--TIFYTAP----TLVRSLMRDGNEYV 503 (778)
Q Consensus 431 ~~l~~~~~~~~~g-~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~v--T~l~~~P----s~l~~L~~~~~~~~ 503 (778)
+++..+|..|-.. ....+..+|.+|.++|+-+..........+.+++.+... .++..++ .....|+.+
T Consensus 120 Vv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~----- 194 (454)
T cd07109 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAH----- 194 (454)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcC-----
Confidence 4445555444322 134567899999999987654332234566777777532 2333332 344455443
Q ss_pred ccCCCCceeEEEEecCCCCHHHHHHHHHH
Q 004034 504 TRYSRKSLRVLGSVGEPINPSAWRWFFNV 532 (778)
Q Consensus 504 ~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (778)
+.++.|.++| +..+.+.+.+.
T Consensus 195 -----~~v~~v~ftG---s~~~g~~i~~~ 215 (454)
T cd07109 195 -----PGVDHISFTG---SVETGIAVMRA 215 (454)
T ss_pred -----CCCCEEEEEC---CHHHHHHHHHH
Confidence 3466777777 44444444443
No 259
>PRK12342 hypothetical protein; Provisional
Probab=20.61 E-value=4.9e+02 Score=27.04 Aligned_cols=83 Identities=14% Similarity=0.021 Sum_probs=55.2
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC-hHHHHHHHHHHHhCC--EEEeCCC-------CCCHHHHHHHH
Q 004034 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML-MELPIAMLACARIGA--VHSVVFA-------GFSSDSLAQRI 300 (778)
Q Consensus 231 ~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~Vai~~~~s-~e~vva~LA~l~~Ga--v~vpl~p-------~~~~~~l~~~l 300 (778)
..+--..+++.+-..|-.|++.| |.++++.|.+. .+....+--++..|+ .+..-+. -..+..|+..+
T Consensus 29 ~~~~iNp~D~~AlE~AlrLk~~g---~~Vtvls~Gp~~a~~~~l~r~alamGaD~avli~d~~~~g~D~~ata~~La~~i 105 (254)
T PRK12342 29 AEAKISQFDLNAIEAASQLATDG---DEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAI 105 (254)
T ss_pred CCccCChhhHHHHHHHHHHhhcC---CEEEEEEeCCChHhHHHHHHHHHHcCCCEEEEEecCccCCCCHHHHHHHHHHHH
Confidence 34455778888999999998543 67777777544 333334455777787 3333333 22256788888
Q ss_pred HhcCCcEEEEcCCccc
Q 004034 301 MDCKPKVVITSNAVKR 316 (778)
Q Consensus 301 ~~~~~~~iit~~~~~~ 316 (778)
+..++++||+-.....
T Consensus 106 ~~~~~DLVl~G~~s~D 121 (254)
T PRK12342 106 EKIGFDLLLFGEGSGD 121 (254)
T ss_pred HHhCCCEEEEcCCccc
Confidence 8889999999876543
No 260
>PRK09088 acyl-CoA synthetase; Validated
Probab=20.58 E-value=7.6e+02 Score=27.73 Aligned_cols=79 Identities=6% Similarity=-0.106 Sum_probs=55.4
Q ss_pred EEccchHHHHHHH--HHHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCcc
Q 004034 406 LHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (778)
Q Consensus 406 ~~th~~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT 483 (778)
.+|...+...... ..-...++.++|++....+-+... +..+++++..|+..+..+.. ..++.+..++++.+++
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~~~~~---~~~~~~~~~~~~~~~~ 96 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL--VALHFACARVGAIYVPLNWR---LSASELDALLQDAEPR 96 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEeeCcc---CCHHHHHHHHHhCCCC
Confidence 4677764332221 111245788899998888877653 55678889999998887643 3678899999999999
Q ss_pred EEEecH
Q 004034 484 IFYTAP 489 (778)
Q Consensus 484 ~l~~~P 489 (778)
.+++..
T Consensus 97 ~ii~~~ 102 (488)
T PRK09088 97 LLLGDD 102 (488)
T ss_pred EEEEcc
Confidence 887654
No 261
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=20.54 E-value=1.1e+03 Score=25.65 Aligned_cols=69 Identities=19% Similarity=0.215 Sum_probs=43.0
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeC--CC--CCCHHHHHHHHHhcCCcEEEEcCCcccCCcccchHH
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV--FA--GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 325 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl--~p--~~~~~~l~~~l~~~~~~~iit~~~~~~~~~~~~~~~ 325 (778)
+++||.|.+..|.-.. ....+...|+.++.+ +. ....+.+...++..++++|+.+.-....+...+.+.
T Consensus 124 ~~~gd~Vlv~~P~y~~---y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~ 196 (380)
T PLN03026 124 LDPGDKIIDCPPTFGM---YVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDD 196 (380)
T ss_pred cCCCCEEEEcCCChHH---HHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHH
Confidence 4689998888765332 223345578755444 33 345677877776668888887765555555555433
No 262
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=20.54 E-value=5.7e+02 Score=29.87 Aligned_cols=85 Identities=11% Similarity=-0.044 Sum_probs=59.7
Q ss_pred EEccchHHHHHHHH--HHHhhCCCCCcEEEEeCCcchhhhhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhCcc
Q 004034 406 LHTTGGYMVHTATT--FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (778)
Q Consensus 406 ~~th~~~l~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~vT 483 (778)
.+|.+.+....... .-...++.++|++....+-+... +..+++++..|+..+..+.. ...+.+..++++.+++
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~--v~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~ 136 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY--LAAWLGLAKLGAVVALLNTQ---QRGAVLAHSLNLVDAK 136 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCCC---CCHHHHHHHHHhcCCC
Confidence 46666643322211 11245788999999888877653 56788899999998887643 3668889999999999
Q ss_pred EEEecHHHHHHH
Q 004034 484 IFYTAPTLVRSL 495 (778)
Q Consensus 484 ~l~~~Ps~l~~L 495 (778)
.+++.......+
T Consensus 137 ~li~~~~~~~~~ 148 (600)
T PRK08279 137 HLIVGEELVEAF 148 (600)
T ss_pred EEEEChHHHHHH
Confidence 998887655544
No 263
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=20.50 E-value=7e+02 Score=27.36 Aligned_cols=70 Identities=19% Similarity=0.206 Sum_probs=41.5
Q ss_pred CCCCCEEEEEeCCChHHHHHHHHHHHhCCEEEeCCC------CCCHHHHHHHHHhc------CCcEEEEcCCcccCCccc
Q 004034 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA------GFSSDSLAQRIMDC------KPKVVITSNAVKRGPKAI 321 (778)
Q Consensus 254 v~~Gd~Vai~~~~s~e~vva~LA~l~~Gav~vpl~p------~~~~~~l~~~l~~~------~~~~iit~~~~~~~~~~~ 321 (778)
+++||.|.+.-. .+.....++...|+.++.++. ....+.+...++.. ++++|+++......+...
T Consensus 99 ~~~gd~Vlv~~~---~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~ 175 (387)
T PRK09331 99 CKKGDYVVLDGL---AHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA 175 (387)
T ss_pred cCCCCEEEECCC---chHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc
Confidence 478998876533 222233456777886665543 25678888888753 678777765433334444
Q ss_pred chHHH
Q 004034 322 HLKDI 326 (778)
Q Consensus 322 ~~~~~ 326 (778)
+++.+
T Consensus 176 ~l~~I 180 (387)
T PRK09331 176 DAKKV 180 (387)
T ss_pred cHHHH
Confidence 44433
No 264
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=20.06 E-value=4.7e+02 Score=33.20 Aligned_cols=90 Identities=11% Similarity=0.103 Sum_probs=54.5
Q ss_pred cEEEEeCCcchhh-hhhHHHHHHHhcCcEEEEEcCCCCCCChhHHHHHHHHhC--ccEEEecHH----HHHHHHhcCCcc
Q 004034 430 DVYWCTADCGWIT-GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK--VTIFYTAPT----LVRSLMRDGNEY 502 (778)
Q Consensus 430 d~~l~~~~~~~~~-g~~~~i~~~L~~G~tlvl~~~~~~~~~~~~~~~~i~~~~--vT~l~~~Ps----~l~~L~~~~~~~ 502 (778)
-++++.+|..|-. .....+..+|.+|.++++-+..........+.+++.+.+ ..++.++|. .-..|..+
T Consensus 686 GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~---- 761 (1038)
T PRK11904 686 GVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTAD---- 761 (1038)
T ss_pred eEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcC----
Confidence 4677888877632 235678899999999988654322223355667777754 345555553 34445444
Q ss_pred cccCCCCceeEEEEecCCCCHHHHHHHHHH
Q 004034 503 VTRYSRKSLRVLGSVGEPINPSAWRWFFNV 532 (778)
Q Consensus 503 ~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (778)
+.+..|.++|. .++.+.+.+.
T Consensus 762 ------p~v~~V~FTGS---~~~g~~I~~~ 782 (1038)
T PRK11904 762 ------PRIAGVAFTGS---TETARIINRT 782 (1038)
T ss_pred ------CCcCeEEEECC---HHHHHHHHHH
Confidence 34677888774 4454555443
Done!