Query 004035
Match_columns 777
No_of_seqs 538 out of 2433
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 12:09:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004035.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004035hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ybx_A Phosphatidylinositol-5- 100.0 2.6E-84 9E-89 715.4 26.7 374 367-773 10-394 (394)
2 2gk9_A Phosphatidylinositol-4- 100.0 2.3E-83 8E-88 708.1 16.6 376 369-774 4-392 (392)
3 1h3i_A Histone H3 lysine 4 spe 99.9 2.4E-25 8.3E-30 238.4 15.2 87 148-234 46-139 (293)
4 1h3i_A Histone H3 lysine 4 spe 99.9 1.7E-25 5.9E-30 239.5 14.0 131 81-211 2-139 (293)
5 2f69_A Histone-lysine N-methyl 98.8 2.8E-09 9.6E-14 112.0 4.5 55 180-234 2-59 (261)
6 2f69_A Histone-lysine N-methyl 98.7 6.9E-09 2.4E-13 109.0 4.6 54 66-119 3-59 (261)
7 2aqx_A Predicted: inositol 1,4 81.2 3.3 0.00011 43.7 8.0 75 474-565 18-92 (289)
8 1w2f_A Inositol-trisphosphate 76.8 4.8 0.00016 42.1 7.5 73 477-565 7-79 (276)
9 2a98_A Inositol 1,4,5-trisphos 71.4 5.8 0.0002 41.1 6.4 62 489-565 1-62 (259)
10 2iew_A Inositol polyphosphate 67.3 6.1 0.00021 42.9 5.8 87 476-565 14-133 (363)
11 3ts3_A Capsid polyprotein; vir 54.5 3 0.0001 40.0 0.4 40 448-495 129-168 (208)
12 3q4u_A Activin receptor type-1 31.5 95 0.0032 30.9 7.5 75 472-551 13-88 (301)
13 3hmm_A TGF-beta receptor type- 29.6 91 0.0031 32.1 7.1 74 471-551 7-83 (303)
14 3gxj_A TGF-beta receptor type- 28.0 98 0.0033 30.8 6.8 74 473-551 9-83 (303)
15 2v62_A Serine/threonine-protei 26.0 2.7E+02 0.0093 28.5 10.1 114 474-622 44-173 (345)
16 3g2f_A Bone morphogenetic prot 24.7 1.4E+02 0.0048 30.3 7.5 73 475-551 21-94 (336)
17 4fie_A Serine/threonine-protei 24.0 2.3E+02 0.0078 31.1 9.3 101 476-622 160-269 (423)
18 2yex_A Serine/threonine-protei 23.9 2.3E+02 0.0079 27.5 8.7 111 474-622 14-127 (276)
19 4frf_A Inositol polyphosphate 22.6 18 0.00061 37.7 -0.1 74 476-565 5-89 (275)
20 4fih_A Serine/threonine-protei 22.4 2.7E+02 0.0091 29.6 9.2 96 477-622 84-192 (346)
21 4e5w_A Tyrosine-protein kinase 21.6 2.6E+02 0.0088 27.7 8.6 112 476-622 30-148 (302)
No 1
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=100.00 E-value=2.6e-84 Score=715.40 Aligned_cols=374 Identities=27% Similarity=0.435 Sum_probs=263.0
Q ss_pred CCccCceeccCCchhHHHHHHHHhhhhhhcCCCCCc-cccCCccCCCccceeee---cCCCCCCCCCCCCcccceEEEEe
Q 004035 367 PKKQGETIARGHKNYELMLNLQLGIRHSVGRPAPAT-SLDLKASAFDPKEKVWT---KFPPEGSKHTPPHQSCEFKWKDY 442 (777)
Q Consensus 367 ~~~~g~~i~~gh~~~~l~~~~~~Gir~sv~~~~~~~-~~~l~~~df~~~~~~~~---~f~~~gs~~tp~h~~~~f~~kdY 442 (777)
..-.|++.+..+.++.||.+||||||++|+++++.+ +..|+++||.+.+|+++ .|+++ .+|. +|+|++|
T Consensus 10 ~~~~~~~~~~~r~~~~l~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~~---~~p~----~f~~k~Y 82 (394)
T 2ybx_A 10 GVDLGTENLYFQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKE---NMPS----HFKFKEY 82 (394)
T ss_dssp -------CCCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEEEESSSTT---TSCS----EEEEEEE
T ss_pred ccCCCCcccccccchHHHHHHHHhHHHHHhhccCCCCccccChhHhhhheEEecccccCCcc---cCCC----CeEEEEE
Confidence 344678889999999999999999999999998764 45578999999999987 45554 4554 7999999
Q ss_pred CHHHHHHHHHHcCCChHHHHHHhccCcccccccCCCCccceEEEecCCceEEEecCHHHHHHHHHHHHHHHHHh-hcccc
Q 004035 443 CPVVFRTLRKLFNVDAADYMISICGNDALRELSSPGKSGSFFYLTNDDKYMIKTMKKAEVKVLIRMLPAYYNHV-RAFEN 521 (777)
Q Consensus 443 ~P~vF~~LR~~~~i~~~dy~~Sl~~~~~l~e~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~~h~-~~n~~ 521 (777)
||.+|++||++|||+++||+.|||.+.++ ++.|+|||||+||+|.|+|||||||+++|+++|+++||+||+|| .+||+
T Consensus 83 ~P~~F~~LR~~~~i~~~dy~~Sl~~~~~~-~~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~ 161 (394)
T 2ybx_A 83 CPMVFRNLRERFGIDDQDFQNSLTRSAPL-PNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGI 161 (394)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHHHSSCCE-ECC-----CCCEEECTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHhCCCHHHHHHHhcCCCcc-ccCCCCCccCEEEEeCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999977665 47899999999999999999999999999999999999999999 56999
Q ss_pred cceeeEEEEEEEEEeCCCccEEEEEEEeccccccceeEEEEecCCCccCCCCCCCCCCCCCCCccccccc---hhhhccC
Q 004035 522 TLVTKFFGLHCVKLTGTAQKKVRFVIMGNLFCSEYVIHRRFDLKGSSHGRTTAKPQTAVDPTTTLKDLDL---NFIFRLQ 598 (777)
Q Consensus 522 TLL~k~~Gl~~i~~~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~---~~~~~l~ 598 (777)
|||+||||||+|++.+ +++|||||+|||++...||++||||||+++|.+.+++ ..+..+||||+|| +..+.|+
T Consensus 162 TLL~k~~Gly~v~~~~---~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~ 237 (394)
T 2ybx_A 162 TLLPQFLGMYRLNVDG---VEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKE-KAKELPTLKDNDFINEGQKIYID 237 (394)
T ss_dssp CSSCCEEEEEEEEETT---EEEEEEEEECSSCSSSCCSEEEEECCSSSCCCCCHHH-HTSSSCEECHHHHHHTTCCCCCC
T ss_pred cChhhhcEEEEEEECC---eEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccCcceecccchHhcCCeEEEC
Confidence 9999999999999865 7899999999999988999999999999999987533 2346789999999 3578999
Q ss_pred HHHHHHHHHHHhhhhHHHhhccccccceEeeeeecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccc
Q 004035 599 KVWFQEFCRQVDRDCDFLEQERIMDYSLLIGVHFREAVSYRDSHTPPRTSGARTPRGNAELDNEPAAPRLSRVDMDQLLL 678 (777)
Q Consensus 599 ~~~~~~l~~ql~~D~~FL~~~~ImDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 678 (777)
+.+++.|++||++||+||+++||||||||||||+.+... .+....+......+.. + ..+... . ..+
T Consensus 238 ~~~k~~l~~qL~~D~~FL~~~~iMDYSLLvGIh~~~~~~-~~~~~~~~~~~~~~~~------~-~~~~~~-~-----t~~ 303 (394)
T 2ybx_A 238 DNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAE-QEEVECEENDGEEEGE------S-DGTHPV-G-----TPP 303 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEESCEEEEEEEEHHHHH-HHHHCC----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCccceeEEEEecccccc-hhhccccccccccccc------c-cccccc-C-----CCc
Confidence 999999999999999999999999999999999975211 1100000000000000 0 000000 0 000
Q ss_pred CcccccccccCCCCccccccccc--cCcccccccCCCCCCcceeEEEEEEEEeEeeccchhhHHHHhhhhccCC-CCcee
Q 004035 679 DPTRWASIKLGVNMPARVEQTVR--RNDCETQLIGEPTGELYDVILYFGIIDILQDYDISKKLEHAYKSMQYDP-TSISA 755 (777)
Q Consensus 679 ~~~~~~~~~lg~~~p~~~~~~~~--~~~~~~~~~g~~~~~~~~~v~y~GIIDiLq~Y~~~KklEh~~Ksl~~d~-~~IS~ 755 (777)
+ ..+..+++....... ..+.+...+....+++.++|||||||||||+||++|||||+||++++++ .+|||
T Consensus 304 ~-------~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~~~~iyyiGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~iS~ 376 (394)
T 2ybx_A 304 D-------SPGNTLNSSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIXILTHYDAKKKAAHAAKTVKHGAGAEIST 376 (394)
T ss_dssp ------------------CCCTTCCCTTTSTTEEECCTTCSSCEEEEEEEECCCEESCC-------------------CC
T ss_pred c-------ccccccccccccccccccccccccccccccCCCCceEEEEEEEEeeecCChhHHHHHHHHHhccCCCCCCce
Confidence 0 001111111000000 0000011111223456778999999999999999999999999999985 68999
Q ss_pred cChhhHHHHHHHHHHhhc
Q 004035 756 VDPRQYSRRFRDFIYRAF 773 (777)
Q Consensus 756 V~P~~Ya~RF~~fi~~iF 773 (777)
|+|++|++||++||.+||
T Consensus 377 V~P~~Y~~RF~~fm~~if 394 (394)
T 2ybx_A 377 VNPEQYSKRFLDFIGHIL 394 (394)
T ss_dssp CCHHHHHHHHHHHHHHHC
T ss_pred ECHHHHHHHHHHHHHHhC
Confidence 999999999999999987
No 2
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-83 Score=708.13 Aligned_cols=376 Identities=27% Similarity=0.438 Sum_probs=219.3
Q ss_pred ccCceeccCCchhHHHHHHHHhhhhhhcCCCCCcc-ccCCccCCCccceeee---cCCCCCCCCCCCCcccceEEEEeCH
Q 004035 369 KQGETIARGHKNYELMLNLQLGIRHSVGRPAPATS-LDLKASAFDPKEKVWT---KFPPEGSKHTPPHQSCEFKWKDYCP 444 (777)
Q Consensus 369 ~~g~~i~~gh~~~~l~~~~~~Gir~sv~~~~~~~~-~~l~~~df~~~~~~~~---~f~~~gs~~tp~h~~~~f~~kdY~P 444 (777)
..++++...+.++.||.+||||||+||+++++.+. ..|+++||.+.+|+++ .|+++ .+|. +|+|++|||
T Consensus 4 ~~~~~~~~~r~~~~~~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~e---~~p~----~f~~k~Y~P 76 (392)
T 2gk9_A 4 FVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRE---NLPS----HFKFKEYCP 76 (392)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEECSSSCCS---SSCS----SBEEEEESH
T ss_pred cceeeeeecCcchHHHHHHHHhHHHHhhcccCCCCccccChhHhhhheEEeeccccCCcc---cCCC----ceEEEEECH
Confidence 35677777778899999999999999999988654 4589999999999986 35544 3453 799999999
Q ss_pred HHHHHHHHHcCCChHHHHHHhccCcccccccCCCCccceEEEecCCceEEEecCHHHHHHHHHHHHHHHHHh-hcccccc
Q 004035 445 VVFRTLRKLFNVDAADYMISICGNDALRELSSPGKSGSFFYLTNDDKYMIKTMKKAEVKVLIRMLPAYYNHV-RAFENTL 523 (777)
Q Consensus 445 ~vF~~LR~~~~i~~~dy~~Sl~~~~~l~e~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~~h~-~~n~~TL 523 (777)
.+|++||++|||+++||+.|||.+.+|. |+|||| +||+|.|+|||||||+++|+++|+++||+||+|| .+||+||
T Consensus 77 ~~F~~LR~~~~i~~~dy~~Sl~~~~~~~---s~GKSG-~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TL 152 (392)
T 2gk9_A 77 QVFRNLRDRFGIDDQDYLVSLTRNPPSE---SEGSDG-RFLISYDRTLVIKEVSSEDIADMHSNLSNYHQYIVKCHGNTL 152 (392)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHSSCCCC---CC------CCCCTTSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTSCSS
T ss_pred HHHHHHHHHhCCCHHHHHHHhcCCCccc---CCCCcc-eEEEcCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 9999999999999999999999877765 999999 9999999999999999999999999999999999 5699999
Q ss_pred eeeEEEEEEEEEeCCCccEEEEEEEeccccccceeEEEEecCCCccCCCCCCCCCCCCCCCccccccc---hhhhccCHH
Q 004035 524 VTKFFGLHCVKLTGTAQKKVRFVIMGNLFCSEYVIHRRFDLKGSSHGRTTAKPQTAVDPTTTLKDLDL---NFIFRLQKV 600 (777)
Q Consensus 524 L~k~~Gl~~i~~~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~---~~~~~l~~~ 600 (777)
|+||||||+|++.+ +++|||||+|||++...||++||||||+++|.+.+++ ..++.+||||+|| +..+.|++.
T Consensus 153 L~k~~Gly~v~~~~---~~~~~vVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~~~ 228 (392)
T 2gk9_A 153 LPQFLGMYRVSVDN---EDSYMLVMRNMFSHRLPVHRKYDLKGSLVSREASDKE-KVKELPTLRDMDFLNKNQKVYIGEE 228 (392)
T ss_dssp SCCEEEEEECCBSS---CCCEEEEEECSSCSSSCCSCCCEECC------------------CCBTTC--CCCCCCCC---
T ss_pred hhhhceEEEEEECC---eEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccccceecccchhhcCCeEEECHH
Confidence 99999999999865 6789999999999988999999999999999997644 2345689999999 457899999
Q ss_pred HHHHHHHHHhhhhHHHhhccccccceEeeeeecccccccC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccc
Q 004035 601 WFQEFCRQVDRDCDFLEQERIMDYSLLIGVHFREAVSYRD--SHTPPRTSGARTPRGNAELDNEPAAPRLSRVDMDQLLL 678 (777)
Q Consensus 601 ~~~~l~~ql~~D~~FL~~~~ImDYSLLvGih~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 678 (777)
+++.|++||++||+||+++||||||||||||..+... .+ ...........+....+. ..+...... ...+
T Consensus 229 ~k~~l~~~l~~D~~FL~~~~iMDYSLLvGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~t~~ 300 (392)
T 2gk9_A 229 EKKIFLEKLKRDVEFLVQLKIMDYSLLLGIHDIIRGS-EPEEEAPVREDESEVDGDCSLT----GPPALVGSY---GTSP 300 (392)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCCCCEECCCBCC-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCccceeEEeeecccccc-cccccccccccccccccccccc----ccccccccc---CCCc
Confidence 9999999999999999999999999999999876211 11 000000000000000000 000000000 0000
Q ss_pred CcccccccccCCCCccccccccc--cCcccccccCCCCCCcceeEEEEEEEEeEeeccchhhHHHHhhhhccCC-CCcee
Q 004035 679 DPTRWASIKLGVNMPARVEQTVR--RNDCETQLIGEPTGELYDVILYFGIIDILQDYDISKKLEHAYKSMQYDP-TSISA 755 (777)
Q Consensus 679 ~~~~~~~~~lg~~~p~~~~~~~~--~~~~~~~~~g~~~~~~~~~v~y~GIIDiLq~Y~~~KklEh~~Ksl~~d~-~~IS~ 755 (777)
+ ..+..+++....... ..+.+...+....+.+.++|||||||||||+||++|||||+||++++++ .+|||
T Consensus 301 ~-------~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~~~~iyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~iS~ 373 (392)
T 2gk9_A 301 E-------GIGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTVKHGAGAEIST 373 (392)
T ss_dssp -------------------------------------------CBCCCEECCCC--------------------------
T ss_pred c-------cccccccccccccccccccccccccccccccCCCceEEEEEEEEeeeeCChhHHHHHHHHHhccCCCCCCce
Confidence 0 001112211100000 0000001111222355678999999999999999999999999999986 68999
Q ss_pred cChhhHHHHHHHHHHhhcc
Q 004035 756 VDPRQYSRRFRDFIYRAFV 774 (777)
Q Consensus 756 V~P~~Ya~RF~~fi~~iF~ 774 (777)
|+|++|++||++||.++|.
T Consensus 374 v~P~~Y~~RF~~fm~~~~~ 392 (392)
T 2gk9_A 374 VHPEQYAKRFLDFITNIFA 392 (392)
T ss_dssp -CHHHHHHHHHHHTC----
T ss_pred ECHHHHHHHHHHHHHHhhC
Confidence 9999999999999999983
No 3
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.92 E-value=2.4e-25 Score=238.36 Aligned_cols=87 Identities=14% Similarity=0.277 Sum_probs=56.2
Q ss_pred eeecCCC-cccceeecCeeecceEEEecCCcEEEEEEe-CCeEeee-EEEEEecCC-EEEEEEcCCeee-eeEEEE--eC
Q 004035 148 KSFSNGD-YYEGEWRRGLQDGHGRYQWKNGNHYIGQWK-NGMINGN-GTMIWSCGN-RYDGFWEDGLPK-GNGTFR--WA 220 (777)
Q Consensus 148 ~~y~nG~-~YeG~f~~G~~~G~G~~~~~nG~~Y~G~fk-nGk~~G~-G~~~~~nG~-~Y~G~w~nG~~~-G~G~~~--~~ 220 (777)
++|+||. +|+|+|++|+++|.|+++|+||.+|+|+|+ +|++||. |+++++||. .|+|.|++|+++ |.|+++ ++
T Consensus 46 ~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G~~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~ 125 (293)
T 1h3i_A 46 EYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTE 125 (293)
T ss_dssp EECSSSCEEEEEEEETTEECSEEEEECTTSCEEEEECCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECT
T ss_pred EEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEEEEeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecC
Confidence 3334444 455555555555555566666666666666 6777777 777777777 477777777777 777766 67
Q ss_pred CCCEEEEEEeCCCc
Q 004035 221 DGSFYVGVWSKDPK 234 (777)
Q Consensus 221 dG~~y~G~w~~g~~ 234 (777)
||..+.|.|.++..
T Consensus 126 ~g~~~~g~w~~g~~ 139 (293)
T 1h3i_A 126 EGRPHFELMPGNSV 139 (293)
T ss_dssp TTSCEEEECSSCCE
T ss_pred CcceEEeEEcCCce
Confidence 77777777766553
No 4
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.92 E-value=1.7e-25 Score=239.50 Aligned_cols=131 Identities=19% Similarity=0.357 Sum_probs=86.5
Q ss_pred EcCCcEEEEEEECCeEeeEEEEEeCCCCEEEEEEeCCEEeeEEEEEecCCC-EEEEEEEeEeecCcceeeecCCCcccce
Q 004035 81 WTDGCMYVGEWYRGKTMGKGKFSWPSGATYEGDFKGGYMDGIGTYTGSVGN-TYKGSWIMNLKHGKGTKSFSNGDYYEGE 159 (777)
Q Consensus 81 ~~dG~~YeG~w~ngk~~G~G~~~~~~G~~YeG~f~~G~~~G~G~~~~~~G~-~Y~G~f~~g~~~G~G~~~y~nG~~YeG~ 159 (777)
|+||.+|+|+|++|++||.|+++|++|.+|+|+|++|++||.|++++++|. +|+|+|++|++||.|+++|+||.+|+|+
T Consensus 2 ~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G~ 81 (293)
T 1h3i_A 2 FFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGE 81 (293)
T ss_dssp CSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEEE
Confidence 344445555555555555555555555555555555555555555555555 5555555566666666667777777777
Q ss_pred ee-cCeeecc-eEEEecCCc-EEEEEEeCCeEe-eeEEEE--EecCCEEEEEEcCCee
Q 004035 160 WR-RGLQDGH-GRYQWKNGN-HYIGQWKNGMIN-GNGTMI--WSCGNRYDGFWEDGLP 211 (777)
Q Consensus 160 f~-~G~~~G~-G~~~~~nG~-~Y~G~fknGk~~-G~G~~~--~~nG~~Y~G~w~nG~~ 211 (777)
|+ +|+++|. |+++++||. .|+|+|++|+++ |.|+++ ++||..+.|.|.++..
T Consensus 82 ~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~~g~~~~g~w~~g~~ 139 (293)
T 1h3i_A 82 VNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSV 139 (293)
T ss_dssp CCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECTTTSCEEEECSSCCE
T ss_pred EeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecCCcceEEeEEcCCce
Confidence 77 7888888 888888888 588888888888 888877 6788888888876655
No 5
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.77 E-value=2.8e-09 Score=111.96 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=39.9
Q ss_pred EEEEeCCeEeeeEEEEEecCCEEEEEEc-CCeeeee-EEEEeCCCCE-EEEEEeCCCc
Q 004035 180 IGQWKNGMINGNGTMIWSCGNRYDGFWE-DGLPKGN-GTFRWADGSF-YVGVWSKDPK 234 (777)
Q Consensus 180 ~G~fknGk~~G~G~~~~~nG~~Y~G~w~-nG~~~G~-G~~~~~dG~~-y~G~w~~g~~ 234 (777)
.|+|++|++||.|+++|+||.+|+|+|. +|.+||. |+|+|+||.+ |+|.|.+|.+
T Consensus 2 ~g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~ 59 (261)
T 2f69_A 2 AMGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM 59 (261)
T ss_dssp ---------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred CceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcE
Confidence 3788888888888888888888888888 8888888 8888888888 8888888765
No 6
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.70 E-value=6.9e-09 Score=109.00 Aligned_cols=54 Identities=31% Similarity=0.497 Sum_probs=36.4
Q ss_pred EEEECCeeeeEEEEEEcCCcEEEEEEE-CCeEeeE-EEEEeCCCCE-EEEEEeCCEE
Q 004035 66 GQWADNLPHGQGKYLWTDGCMYVGEWY-RGKTMGK-GKFSWPSGAT-YEGDFKGGYM 119 (777)
Q Consensus 66 G~~~~~~~hG~G~~~~~dG~~YeG~w~-ngk~~G~-G~~~~~~G~~-YeG~f~~G~~ 119 (777)
|+|++|++||.|+++|+||..|+|+|. +|.+||. |+++||||.+ |+|+|.+|.+
T Consensus 3 g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~ 59 (261)
T 2f69_A 3 MGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM 59 (261)
T ss_dssp --------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred ceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcE
Confidence 677788888888888888888888887 8888887 8888887777 7777777766
No 7
>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus}
Probab=81.25 E-value=3.3 Score=43.65 Aligned_cols=75 Identities=20% Similarity=0.352 Sum_probs=51.8
Q ss_pred ccCCCCccceEEEecCCceEEEecCHHHHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEEEEecccc
Q 004035 474 LSSPGKSGSFFYLTNDDKYMIKTMKKAEVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIMGNLFC 553 (777)
Q Consensus 474 ~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM~Nlf~ 553 (777)
..-.|-.|+ +...++..|+|-....|.++...+.++ .+ ..++|+|+|...+ .+ ..||+|+||.+
T Consensus 18 ~QvaGH~g~--~~~~~~G~i~Kp~~~~E~~fYe~l~~~---~L----~~fvP~y~G~~~~--~~-----~~~i~LEDLt~ 81 (289)
T 2aqx_A 18 IQLAGHAGS--FKAAANGRILKKHCESEQRCLDRLMAD---VL----RPFVPAYHGDVVK--DG-----ERYNQMDDLLA 81 (289)
T ss_dssp CCCSSCTTS--EEECSTTEEEEECCHHHHHHHHHHTTS---TT----GGGSCCEEEEEEE--TT-----EEEEEEECTTT
T ss_pred EEeeCCCCc--ceECCCCEEEeeCcHHHHHHHHHHhhh---hh----HHhCchheEeecc--CC-----ceEEEehhhhc
Confidence 345677776 333455568999999999998887543 12 3679999997554 22 36999999965
Q ss_pred ccceeEEEEecC
Q 004035 554 SEYVIHRRFDLK 565 (777)
Q Consensus 554 ~~~~i~~~yDLK 565 (777)
. ..--.+-|||
T Consensus 82 g-f~~PcVmDiK 92 (289)
T 2aqx_A 82 D-FDSPCVMDCK 92 (289)
T ss_dssp T-CSSCEEEEEE
T ss_pred C-CCCceEEEEe
Confidence 3 2233567888
No 8
>1w2f_A Inositol-trisphosphate 3-kinase A; inositol phosphate kinase, transferase, calmodulin-binding; 1.8A {Homo sapiens} SCOP: d.143.1.3 PDB: 1tzd_A* 1w2d_A* 1w2c_A*
Probab=76.83 E-value=4.8 Score=42.14 Aligned_cols=73 Identities=19% Similarity=0.275 Sum_probs=49.9
Q ss_pred CCCccceEEEecCCceEEEecCHHHHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEEEEeccccccc
Q 004035 477 PGKSGSFFYLTNDDKYMIKTMKKAEVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIMGNLFCSEY 556 (777)
Q Consensus 477 ~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM~Nlf~~~~ 556 (777)
.|-.|.+... .|+..|+|-....|.++...+.++ .+ ..++|+|+|.... . ...||+|+||-.. .
T Consensus 7 aGH~g~l~~~-~~~g~i~Kp~~~~E~~fY~~l~~~---~L----~~fvP~y~G~~~~--~-----~~~~i~LEdLt~g-f 70 (276)
T 1w2f_A 7 AGHTGSFKAA-GTSGLILKRCSEPERYCLARLMAD---AL----RGCVPAFHGVVER--D-----GESYLQLQDLLDG-F 70 (276)
T ss_dssp TTCCSCCEEC-SSTTEEEEECCHHHHHHHHHHHTS---GG----GGGSCCEEEEEEE--T-----TEEEEEEECTTTT-C
T ss_pred eCCCCceeec-CCCCEEEeeCCHHHHHHHHHhhhh---hH----HHhChhhheeecc--C-----CceEEEechHhcC-C
Confidence 3555654322 267789999999999998887642 22 2579999997543 2 2379999999653 2
Q ss_pred eeEEEEecC
Q 004035 557 VIHRRFDLK 565 (777)
Q Consensus 557 ~i~~~yDLK 565 (777)
.--.+-|||
T Consensus 71 ~~PcVmDiK 79 (276)
T 1w2f_A 71 DGPCVLDCK 79 (276)
T ss_dssp SSCEEEEEE
T ss_pred CCceEEEEE
Confidence 223567888
No 9
>2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens}
Probab=71.45 E-value=5.8 Score=41.14 Aligned_cols=62 Identities=18% Similarity=0.307 Sum_probs=44.6
Q ss_pred CCceEEEecCHHHHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEEEEeccccccceeEEEEecC
Q 004035 489 DDKYMIKTMKKAEVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIMGNLFCSEYVIHRRFDLK 565 (777)
Q Consensus 489 D~rfiIKti~~~E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLK 565 (777)
|+..|+|-.+..|..+...+.+. . -..++|+|+|.... . ...||+|+||.+. ..--.+-|||
T Consensus 1 ~~g~i~K~~~~~E~~fY~~l~~~---~----L~~fvP~y~G~~~~--~-----~~~~i~LEdLt~g-~~~PcVmDiK 62 (259)
T 2a98_A 1 EDGRILKRFCQCEQRSLEQLMKD---P----LRPFVPAYYGMVLQ--D-----GQTFNQMEDLLAD-FEGPSIMDCK 62 (259)
T ss_dssp CCSEEEEECCHHHHHHHHHHTTS---T----TGGGSCCEEEEEEE--T-----TEEEEEEECTTTT-CSSCEEEEEE
T ss_pred CCCEEeccCCHHHHHHHHHhhhh---h----HHHhCcCceEEEEE--C-----CceEEEeehHhcC-CCCceEEEEE
Confidence 45689999999999999887542 1 23589999997543 2 2379999999653 2233567888
No 10
>2iew_A Inositol polyphosphate multikinase; ATP-grAsp fold related, transferase; 2.00A {Saccharomyces cerevisiae} PDB: 2if8_A*
Probab=67.32 E-value=6.1 Score=42.95 Aligned_cols=87 Identities=14% Similarity=0.198 Sum_probs=45.8
Q ss_pred CCCCccceEEEecCCceEEEecCHHHHHHHHHHHHHHH------HHhhcccccceeeEEEEEEEEEeCC-----------
Q 004035 476 SPGKSGSFFYLTNDDKYMIKTMKKAEVKVLIRMLPAYY------NHVRAFENTLVTKFFGLHCVKLTGT----------- 538 (777)
Q Consensus 476 s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~------~h~~~n~~TLL~k~~Gl~~i~~~~~----------- 538 (777)
-.|-.| ++...|+.+|+|-....|+.|...+...=+ ..+..--..++|+|+|...+.....
T Consensus 14 VaGH~g--~l~~~dg~~i~Kp~~~~E~~FYe~l~~~~~~~~~~~~~~~~~L~~fvP~y~G~~~~~~~~~~~~~~~~~~~~ 91 (363)
T 2iew_A 14 AAGHDG--TLTDGDGLLIFKPAFPQELEFYKAIQVRDVSRRKSSADGDAPLCSWMPTYLGVLNEGAKIEQSGDAALLKID 91 (363)
T ss_dssp --------------CCEEEEECCHHHHHHHHHHC------------CCCCGGGGSCCEEEEEEC----------------
T ss_pred ccCCcc--eeEcCCCCEEeCcCChHHHHHHHHHhhhcccccccccccchhHHhhCcccceeEecccccccccchhhcccc
Confidence 346666 344468999999999999999877643200 0000112368999999987652110
Q ss_pred ----------------CccEEEEEEEeccccccceeEEEEecC
Q 004035 539 ----------------AQKKVRFVIMGNLFCSEYVIHRRFDLK 565 (777)
Q Consensus 539 ----------------~~~~~~fvVM~Nlf~~~~~i~~~yDLK 565 (777)
......||||+||-+. ..--.+-|||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~i~LEdLt~g-f~~PcVlDiK 133 (363)
T 2iew_A 92 ERLSDSTDNLDSIPVKSEKSKQYLVLENLLYG-FSKPNILDIK 133 (363)
T ss_dssp -------------------CCEEEEEECTTTT-CSSEEEEEEE
T ss_pred cccccCccchhcccccCCCCccEEEechhhcC-CCCceEEEEE
Confidence 0003479999999753 2334678888
No 11
>3ts3_A Capsid polyprotein; virus protein, projection domain, astrovirus capsid, viral P; 1.49A {Turkey astrovirus 2}
Probab=54.51 E-value=3 Score=40.02 Aligned_cols=40 Identities=30% Similarity=0.620 Sum_probs=28.6
Q ss_pred HHHHHHcCCChHHHHHHhccCcccccccCCCCccceEEEecCCceEEE
Q 004035 448 RTLRKLFNVDAADYMISICGNDALRELSSPGKSGSFFYLTNDDKYMIK 495 (777)
Q Consensus 448 ~~LR~~~~i~~~dy~~Sl~~~~~l~e~~s~GKSGs~F~~T~D~rfiIK 495 (777)
..|....++.+-|=..|+. .+.|+-+++||.|.|+||||=
T Consensus 129 q~lk~r~nl~egDpvismg--------dt~Grraalfyrtsder~ill 168 (208)
T 3ts3_A 129 EQLKQRLNLAEGDPVISMG--------DTNGRRAALFYRTSDEKYILF 168 (208)
T ss_dssp HHHHHHHCCCTTCEEEEEE--------ETTCCEEEEEEETTTTEEEEE
T ss_pred hhhhhhhccccCCceeeec--------ccCCceeeeeeeccCceEEEE
Confidence 3466666666544444443 367999999999999999985
No 12
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=31.50 E-value=95 Score=30.93 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=43.5
Q ss_pred ccccCCCCccceEEEecC-CceEEEecCHHHHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEEEEec
Q 004035 472 RELSSPGKSGSFFYLTND-DKYMIKTMKKAEVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIMGN 550 (777)
Q Consensus 472 ~e~~s~GKSGs~F~~T~D-~rfiIKti~~~E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM~N 550 (777)
.+....|..|.+|--+.+ ..+.||.++..+.+.+..-..-+-.-..+||| +++++|.+...... ....++||+-
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~n--iv~~~~~~~~~~~~---~~~~~lv~e~ 87 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN--ILGFIASDMTSRHS---STQLWLITHY 87 (301)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTT--BCCEEEEEEEEETT---EEEEEEEECC
T ss_pred EEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcC--eeeEEEeeccccCC---CceeEEehhh
Confidence 334455777877765554 45888999876555444322222111134554 67888876554332 4567888886
Q ss_pred c
Q 004035 551 L 551 (777)
Q Consensus 551 l 551 (777)
+
T Consensus 88 ~ 88 (301)
T 3q4u_A 88 H 88 (301)
T ss_dssp C
T ss_pred c
Confidence 4
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=29.62 E-value=91 Score=32.14 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=43.6
Q ss_pred cccccCCCCccceEEEecCC-ceEEEecCHHHHHHHHHHHHHHHHHh--hcccccceeeEEEEEEEEEeCCCccEEEEEE
Q 004035 471 LRELSSPGKSGSFFYLTNDD-KYMIKTMKKAEVKVLIRMLPAYYNHV--RAFENTLVTKFFGLHCVKLTGTAQKKVRFVI 547 (777)
Q Consensus 471 l~e~~s~GKSGs~F~~T~D~-rfiIKti~~~E~~~l~~~Lp~Y~~h~--~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvV 547 (777)
|.+..-.|..|.+|--..++ .+-||.++..+.+.+..-.. ..-+ .+||| |++++|.+.-.- . .....++|
T Consensus 7 L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~E--i~~~~~l~HpN--Iv~l~g~~~~~~-~--~~~~~~lV 79 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAE--IYQTVMLRHEN--ILGFIAADNKDN-G--TWTQLWLV 79 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHH--HHTSTTCCCTT--BCCEEEEEEEEC-S--SSEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHH--HHHHhcCCCCC--CCcEEEEEEecC-C--CceEEEEE
Confidence 34444557788887655555 45689998766554432211 1111 25666 788999755432 1 14567899
Q ss_pred Eecc
Q 004035 548 MGNL 551 (777)
Q Consensus 548 M~Nl 551 (777)
|+-+
T Consensus 80 ~Ey~ 83 (303)
T 3hmm_A 80 SDYH 83 (303)
T ss_dssp EECC
T ss_pred ecCC
Confidence 9975
No 14
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=28.05 E-value=98 Score=30.80 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=40.5
Q ss_pred cccCCCCccceEEEec-CCceEEEecCHHHHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEEEEecc
Q 004035 473 ELSSPGKSGSFFYLTN-DDKYMIKTMKKAEVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIMGNL 551 (777)
Q Consensus 473 e~~s~GKSGs~F~~T~-D~rfiIKti~~~E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM~Nl 551 (777)
+....|..|.+|--.. ...+.||.+++.+...+.+-..-+-.-...|| -+++++|.+...-.. ....++||+.+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~--~i~~~~~~~~~~~~~---~~~~~lv~e~~ 83 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHE--NILGFIAADNKDNGT---WTQLWLVSDYH 83 (303)
T ss_dssp EEEEECSSSEEEEC-CTTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC---CBCCEEEEEEEECSS---SEEEEEEEECC
T ss_pred hhccCCCCeEEEEEEEcCcceEEEEecccchhhHHHHHHHHHHHhccCc--ceeeeeeecccCCCc---cceeEEEEecc
Confidence 3344566777765443 45688999987766554432221111113445 467888876553211 34678899875
No 15
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=26.04 E-value=2.7e+02 Score=28.49 Aligned_cols=114 Identities=13% Similarity=0.262 Sum_probs=62.7
Q ss_pred ccCCCCccceEEEe------cCCceEEEecCH------HHHHHHHHHHH----HHHHHhhcccccceeeEEEEEEEEEeC
Q 004035 474 LSSPGKSGSFFYLT------NDDKYMIKTMKK------AEVKVLIRMLP----AYYNHVRAFENTLVTKFFGLHCVKLTG 537 (777)
Q Consensus 474 ~~s~GKSGs~F~~T------~D~rfiIKti~~------~E~~~l~~~Lp----~Y~~h~~~n~~TLL~k~~Gl~~i~~~~ 537 (777)
....|..|.+|--. ....++||.+.+ .|.+++.++.. .-+..+..-.+.-+++++|.+.....+
T Consensus 44 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~ 123 (345)
T 2v62_A 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKG 123 (345)
T ss_dssp EC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSS
T ss_pred eEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCC
Confidence 34456667766554 345789999854 45555555321 122233333344578999987765433
Q ss_pred CCccEEEEEEEeccccccceeEEEEecCCCccCCCCCCCCCCCCCCCccccccchhhhccCHHHHHHHHHHHhhhhHHHh
Q 004035 538 TAQKKVRFVIMGNLFCSEYVIHRRFDLKGSSHGRTTAKPQTAVDPTTTLKDLDLNFIFRLQKVWFQEFCRQVDRDCDFLE 617 (777)
Q Consensus 538 ~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~~~~~~l~~~~~~~l~~ql~~D~~FL~ 617 (777)
....++||+.+ ... +. |+ . .. .-.+.......++.||-.=.++|.
T Consensus 124 ---~~~~~lv~e~~-~~~--L~---~~-------l-~~------------------~~~~~~~~~~~i~~qi~~aL~~LH 168 (345)
T 2v62_A 124 ---RSYRFMVMERL-GID--LQ---KI-------S-GQ------------------NGTFKKSTVLQLGIRMLDVLEYIH 168 (345)
T ss_dssp ---CEEEEEEEECE-EEE--HH---HH-------C-BG------------------GGBCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CcEEEEEEecc-CCC--HH---HH-------H-Hh------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56788999986 321 10 00 0 00 002345556678888888899999
Q ss_pred hcccc
Q 004035 618 QERIM 622 (777)
Q Consensus 618 ~~~Im 622 (777)
+.+|+
T Consensus 169 ~~~iv 173 (345)
T 2v62_A 169 ENEYV 173 (345)
T ss_dssp HTTEE
T ss_pred hCCee
Confidence 98764
No 16
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=24.73 E-value=1.4e+02 Score=30.29 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=41.9
Q ss_pred cCCCCccceEEEec-CCceEEEecCHHHHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEEEEecc
Q 004035 475 SSPGKSGSFFYLTN-DDKYMIKTMKKAEVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIMGNL 551 (777)
Q Consensus 475 ~s~GKSGs~F~~T~-D~rfiIKti~~~E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM~Nl 551 (777)
...|..|.+|--+. +..+.||.++......+.....-+......|| -++++++.+....... ....++||+.+
T Consensus 21 lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~--~i~~~~~~~~~~~~~~--~~~~~lv~e~~ 94 (336)
T 3g2f_A 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHD--NIARFIVGDERVTADG--RMEYLLVMEYY 94 (336)
T ss_dssp EEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCT--TBCCEEEEEEEECTTS--CEEEEEEECCC
T ss_pred cccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCc--chhhheecccccccCC--CceEEEEEecC
Confidence 34566777776544 45588899976655444432211111123444 4678888765543332 56678999874
No 17
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=24.03 E-value=2.3e+02 Score=31.07 Aligned_cols=101 Identities=18% Similarity=0.232 Sum_probs=58.4
Q ss_pred CCCCccceEEEec---CCceEEEecCHH---HHHHHH-H--HHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEE
Q 004035 476 SPGKSGSFFYLTN---DDKYMIKTMKKA---EVKVLI-R--MLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFV 546 (777)
Q Consensus 476 s~GKSGs~F~~T~---D~rfiIKti~~~---E~~~l~-~--~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fv 546 (777)
..|..|.+|--.+ ...+-||.|... +.+.++ + +|.. .+||| |+++|+.|.. ....+|
T Consensus 160 G~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~-----l~Hpn--IV~l~~~~~~-------~~~~~i 225 (423)
T 4fie_A 160 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD-----YQHEN--VVEMYNSYLV-------GDELWV 225 (423)
T ss_dssp EECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHH-----CCCTT--BCCEEEEEEE-------TTEEEE
T ss_pred ccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHh-----CCCCC--CCceEEEEEE-------CCEEEE
Confidence 4466788876554 456889998532 111111 1 1111 14565 8899998754 234678
Q ss_pred EEeccccccceeEEEEecCCCccCCCCCCCCCCCCCCCccccccchhhhccCHHHHHHHHHHHhhhhHHHhhcccc
Q 004035 547 IMGNLFCSEYVIHRRFDLKGSSHGRTTAKPQTAVDPTTTLKDLDLNFIFRLQKVWFQEFCRQVDRDCDFLEQERIM 622 (777)
Q Consensus 547 VM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~Im 622 (777)
||+-+=... + +|+ -..-.+.......++.||-.=.+||.++||+
T Consensus 226 VmEy~~gG~--L---~~~---------------------------i~~~~l~e~~~~~~~~qil~aL~ylH~~~Ii 269 (423)
T 4fie_A 226 VMEFLEGGA--L---TDI---------------------------VTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 269 (423)
T ss_dssp EEECCTTEE--H---HHH---------------------------HHHSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EEeCCCCCc--H---HHH---------------------------HhccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 999643211 1 111 0011244555667888999999999998864
No 18
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=23.91 E-value=2.3e+02 Score=27.54 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=57.3
Q ss_pred ccCCCCccceEEEec---CCceEEEecCHHHHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEEEEec
Q 004035 474 LSSPGKSGSFFYLTN---DDKYMIKTMKKAEVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIMGN 550 (777)
Q Consensus 474 ~~s~GKSGs~F~~T~---D~rfiIKti~~~E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM~N 550 (777)
....|..|.+|--.. +..++||.+.........+.+..-..-+..-.+.-+++++|.+.- ....++||+.
T Consensus 14 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~ 86 (276)
T 2yex_A 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GNIQYLFLEY 86 (276)
T ss_dssp EEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEEEEEEC
T ss_pred EeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------CCEEEEEEEe
Confidence 344577777776542 567899998643211111111111122222223347888886542 3356788886
Q ss_pred cccccceeEEEEecCCCccCCCCCCCCCCCCCCCccccccchhhhccCHHHHHHHHHHHhhhhHHHhhcccc
Q 004035 551 LFCSEYVIHRRFDLKGSSHGRTTAKPQTAVDPTTTLKDLDLNFIFRLQKVWFQEFCRQVDRDCDFLEQERIM 622 (777)
Q Consensus 551 lf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~Im 622 (777)
+-.. +|. .... . ...+.......++.||-.=.++|.+.+|+
T Consensus 87 ~~~~--------~L~----~~l~-~------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 127 (276)
T 2yex_A 87 CSGG--------ELF----DRIE-P------------------DIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127 (276)
T ss_dssp CTTE--------EGG----GGSB-T------------------TTBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred cCCC--------cHH----HHHh-h------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4211 111 0000 0 01133445566788888888899988763
No 19
>4frf_A Inositol polyphosphate multikinase alpha; ATP grAsp, inositol phosphate kinase, transferase; 2.90A {Arabidopsis thaliana}
Probab=22.59 E-value=18 Score=37.70 Aligned_cols=74 Identities=19% Similarity=0.349 Sum_probs=28.9
Q ss_pred CCCCccceEEEecCCceEEEecCH-----HHHHHHHHHHHHHHHHhhccc---c---cceeeEEEEEEEEEeCCCccEEE
Q 004035 476 SPGKSGSFFYLTNDDKYMIKTMKK-----AEVKVLIRMLPAYYNHVRAFE---N---TLVTKFFGLHCVKLTGTAQKKVR 544 (777)
Q Consensus 476 s~GKSGs~F~~T~D~rfiIKti~~-----~E~~~l~~~Lp~Y~~h~~~n~---~---TLL~k~~Gl~~i~~~~~~~~~~~ 544 (777)
..|+.|.+. ..++ .|+|=+.. .|++|-.++. .++ . .++|+|+|...+.-. ....
T Consensus 5 ~~Gh~G~l~--~~~G-~v~KP~~~~~rg~~E~~FYe~l~--------~~~~~~~~L~~fvP~y~G~~~~~~~----~~~~ 69 (275)
T 4frf_A 5 KDGKPGPLV--DDKG-RFFKPLQGDSRGEIEVKFYESFS--------SNTEVPEHIHRYFPVYHGTQAVEGS----DGAA 69 (275)
T ss_dssp ----------------------------CCHHHHHHHHH--------HCTTSCHHHHTTSCCBCCC--------------
T ss_pred CCCCCCceE--CCCC-cEEeecCCCCcchHHHHHHHHHh--------hCCCchHHHHhhCcCCceeEEecCC----CCcc
Confidence 457777643 3444 57898865 5888766542 222 1 348999998776432 3456
Q ss_pred EEEEeccccccceeEEEEecC
Q 004035 545 FVIMGNLFCSEYVIHRRFDLK 565 (777)
Q Consensus 545 fvVM~Nlf~~~~~i~~~yDLK 565 (777)
||||+||-.. ..--.+-|||
T Consensus 70 ~i~LEdLt~g-f~~PcVlDiK 89 (275)
T 4frf_A 70 MMVLENLLAE-YTKPSVMDVK 89 (275)
T ss_dssp CCCBCCGGGG-CSSEEEEEEE
T ss_pred EEEEeecccc-cCCCceeEee
Confidence 9999999642 2334567888
No 20
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=22.35 E-value=2.7e+02 Score=29.59 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=58.0
Q ss_pred CCCccceEEEec---CCceEEEecCHH----------HHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEE
Q 004035 477 PGKSGSFFYLTN---DDKYMIKTMKKA----------EVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKV 543 (777)
Q Consensus 477 ~GKSGs~F~~T~---D~rfiIKti~~~----------E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~ 543 (777)
.|..|.+|--.+ ...+-||.|++. |++.|.++ +||| |+++++.+.- ...
T Consensus 84 ~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l---------~Hpn--IV~l~~~~~~-------~~~ 145 (346)
T 4fih_A 84 EGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY---------QHEN--VVEMYNSYLV-------GDE 145 (346)
T ss_dssp ECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC---------CCTT--BCCEEEEEEE-------TTE
T ss_pred cCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC---------CCCC--CCcEEEEEEE-------CCE
Confidence 467788876554 456889999543 33333221 4665 7899987653 234
Q ss_pred EEEEEeccccccceeEEEEecCCCccCCCCCCCCCCCCCCCccccccchhhhccCHHHHHHHHHHHhhhhHHHhhcccc
Q 004035 544 RFVIMGNLFCSEYVIHRRFDLKGSSHGRTTAKPQTAVDPTTTLKDLDLNFIFRLQKVWFQEFCRQVDRDCDFLEQERIM 622 (777)
Q Consensus 544 ~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~Im 622 (777)
.+|||+-+=... + +|+- ..-.+.......++.||-.=.++|.+.+|+
T Consensus 146 ~~ivmEy~~gg~--L---~~~l---------------------------~~~~l~e~~~~~~~~qi~~aL~ylH~~~Ii 192 (346)
T 4fih_A 146 LWVVMEFLEGGA--L---TDIV---------------------------THTRMNEEQIAAVCLAVLQALSVLHAQGVI 192 (346)
T ss_dssp EEEEECCCTTEE--H---HHHH---------------------------HHSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EEEEEeCCCCCc--H---HHHH---------------------------HcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 578999743211 1 1110 011234555667888998899999998864
No 21
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=21.61 E-value=2.6e+02 Score=27.69 Aligned_cols=112 Identities=15% Similarity=0.122 Sum_probs=56.1
Q ss_pred CCCCccceEEEe-------cCCceEEEecCHHHHHHHHHHHHHHHHHhhcccccceeeEEEEEEEEEeCCCccEEEEEEE
Q 004035 476 SPGKSGSFFYLT-------NDDKYMIKTMKKAEVKVLIRMLPAYYNHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIM 548 (777)
Q Consensus 476 s~GKSGs~F~~T-------~D~rfiIKti~~~E~~~l~~~Lp~Y~~h~~~n~~TLL~k~~Gl~~i~~~~~~~~~~~fvVM 548 (777)
..|..|..|-.. ....++||.+.........+.+..=..-+..-.+.-++++++++...- ....++||
T Consensus 30 g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~~~lv~ 104 (302)
T 4e5w_A 30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG-----GNGIKLIM 104 (302)
T ss_dssp EECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--------CCEEEEE
T ss_pred CCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC-----CceEEEEE
Confidence 457778887655 466799999975422111111111112222222345788888765421 23457888
Q ss_pred eccccccceeEEEEecCCCccCCCCCCCCCCCCCCCccccccchhhhccCHHHHHHHHHHHhhhhHHHhhcccc
Q 004035 549 GNLFCSEYVIHRRFDLKGSSHGRTTAKPQTAVDPTTTLKDLDLNFIFRLQKVWFQEFCRQVDRDCDFLEQERIM 622 (777)
Q Consensus 549 ~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKDlD~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~Im 622 (777)
+.+=... |.++=-...-.+.......++.||-.=.++|.+.+|+
T Consensus 105 e~~~~~~------------------------------L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 148 (302)
T 4e5w_A 105 EFLPSGS------------------------------LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148 (302)
T ss_dssp ECCTTCB------------------------------HHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EeCCCCc------------------------------HHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 8642211 0000000001134455566788888888999988754
Done!