Query 004047
Match_columns 777
No_of_seqs 437 out of 3125
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 12:32:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004047.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004047hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 4E-119 1E-123 1045.3 52.1 623 109-776 1-644 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2E-109 8E-114 966.7 49.1 609 109-776 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.1E-82 3.9E-87 771.0 45.2 542 134-776 8-605 (926)
4 3afg_A Subtilisin-like serine 100.0 1.3E-60 4.4E-65 545.7 30.7 369 22-637 34-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 2.5E-58 8.6E-63 510.6 21.8 346 22-636 1-392 (395)
6 3t41_A Epidermin leader peptid 100.0 1.1E-56 3.7E-61 510.3 27.1 337 63-637 66-466 (471)
7 1y9z_A Alkaline serine proteas 100.0 2.1E-55 7.1E-60 494.1 24.9 378 134-656 15-436 (441)
8 2p4e_P Proprotein convertase s 100.0 1E-56 3.5E-61 515.2 6.3 340 25-604 77-423 (692)
9 1r6v_A Subtilisin-like serine 100.0 7.6E-54 2.6E-58 495.0 27.4 386 22-647 30-450 (671)
10 1dbi_A AK.1 serine protease; h 100.0 7.6E-52 2.6E-56 437.0 23.3 258 134-635 22-279 (280)
11 1r0r_E Subtilisin carlsberg; h 100.0 3.3E-52 1.1E-56 438.6 20.1 256 134-635 15-274 (274)
12 1gci_A Subtilisin; hydrolase, 100.0 5.9E-52 2E-56 434.9 21.4 255 134-635 15-269 (269)
13 1to2_E Subtilisin BPN'; serine 100.0 1.1E-51 3.7E-56 436.0 21.5 258 134-636 15-276 (281)
14 4h6x_A Thiazoline oxidase/subt 100.0 3.8E-53 1.3E-57 462.5 7.5 307 134-635 22-337 (357)
15 1thm_A Thermitase; hydrolase(s 100.0 4.7E-51 1.6E-55 430.9 22.0 257 134-635 22-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 2.3E-51 7.7E-56 442.7 19.0 264 134-636 32-311 (327)
17 3zxy_A Subtilisin-like protein 100.0 1.3E-51 4.6E-56 436.6 14.1 267 139-635 3-274 (282)
18 2ixt_A 36KDA protease; serine 100.0 3.4E-50 1.2E-54 431.9 24.6 280 134-630 17-309 (310)
19 4h6w_A N-terminal cyanobactin 100.0 9.8E-51 3.3E-55 435.6 13.7 272 134-635 12-287 (306)
20 2z30_A TK-subtilisin; thermoco 100.0 4E-50 1.4E-54 432.5 17.9 264 134-636 19-317 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 1.2E-49 4.2E-54 434.2 17.3 269 134-636 34-329 (347)
22 1wmd_A Protease; alpha-beta hy 100.0 6E-49 2.1E-53 441.3 20.3 293 134-637 12-319 (434)
23 3lxu_X Tripeptidyl-peptidase 2 100.0 1.2E-48 3.9E-53 469.1 23.6 355 219-776 267-652 (1354)
24 3lpc_A APRB2; protease, subtil 100.0 6.1E-49 2.1E-53 427.8 18.3 297 134-636 23-337 (340)
25 1sh7_A Extracellular subtilisi 100.0 1E-47 3.4E-52 405.8 23.4 236 134-605 20-258 (284)
26 4dzt_A Aqualysin-1, aqualysin- 100.0 3.7E-47 1.3E-51 401.1 20.7 236 134-605 22-260 (276)
27 2b6n_A Proteinase K; S binding 100.0 5E-47 1.7E-51 399.9 20.7 237 134-604 22-261 (278)
28 2pwa_A Proteinase K; structure 100.0 2.1E-47 7.3E-52 402.2 17.6 240 135-630 24-271 (279)
29 2oxa_A Extracellular serine pr 100.0 6E-46 2E-50 432.7 24.1 299 133-641 60-430 (600)
30 1p8j_A Furin precursor; prohor 100.0 3.3E-46 1.1E-50 422.5 19.4 291 134-638 29-332 (471)
31 2qtw_B Proprotein convertase s 100.0 7.6E-46 2.6E-50 414.7 19.8 275 134-635 17-313 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 8.4E-46 2.9E-50 421.9 19.9 284 134-639 45-345 (503)
33 3f7m_A Alkaline serine proteas 100.0 1.6E-45 5.4E-50 389.3 17.6 231 134-605 24-262 (279)
34 3hjr_A Extracellular serine pr 100.0 6.7E-43 2.3E-47 408.6 20.3 296 133-638 60-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 3E-25 1E-29 253.1 5.8 97 250-360 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.8 2.8E-21 9.5E-26 210.1 8.7 101 252-361 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.9 1.7E-09 5.8E-14 122.5 10.7 77 284-360 284-374 (544)
38 2w2n_P Proprotein convertase s 98.9 2.5E-09 8.6E-14 95.5 6.2 77 22-106 36-112 (114)
39 3icu_A E3 ubiquitin-protein li 98.8 2.9E-08 9.8E-13 96.3 12.3 95 407-501 82-188 (194)
40 3cnq_P Subtilisin BPN'; unclea 98.7 2.3E-08 7.7E-13 83.6 8.2 74 21-111 6-79 (80)
41 2qtw_A Proprotein convertase s 98.5 8.7E-08 3E-12 86.5 6.3 77 22-106 46-122 (124)
42 1v5i_B POIA1, IA-1=serine prot 98.5 2.5E-07 8.6E-12 76.1 8.2 69 24-106 3-74 (76)
43 2z30_B TK-subtilisin; thermoco 97.2 0.00043 1.5E-08 54.7 5.6 39 62-101 22-60 (65)
44 2ek8_A Aminopeptidase; metallo 96.7 0.0045 1.5E-07 68.3 9.8 73 415-487 107-182 (421)
45 3iib_A Peptidase M28; YP_92679 96.0 0.024 8.3E-07 62.8 11.1 82 418-499 124-226 (444)
46 3kas_A Transferrin receptor pr 95.6 0.014 4.9E-07 67.2 7.0 69 419-487 128-230 (640)
47 3fed_A Glutamate carboxypeptid 95.4 0.017 5.8E-07 67.3 6.8 71 418-488 150-268 (707)
48 2ys4_A Hydrocephalus-inducing 93.7 0.22 7.4E-06 44.3 8.4 52 686-742 40-91 (122)
49 3qbt_B Inositol polyphosphate 90.4 2.6 8.8E-05 38.3 11.5 89 687-776 43-137 (140)
50 3lxu_X Tripeptidyl-peptidase 2 88.5 0.2 6.9E-06 61.5 3.2 24 139-162 32-55 (1354)
51 1y9z_A Alkaline serine proteas 88.2 0.32 1.1E-05 53.6 4.4 32 505-544 180-211 (441)
52 2r39_A FIXG-related protein; s 88.0 6.4 0.00022 34.4 12.0 54 688-743 32-85 (118)
53 2e6j_A Hydin protein; PAPD, st 82.6 1.7 5.7E-05 37.6 5.4 55 687-742 26-81 (112)
54 3zyz_A Beta-D-glucoside glucoh 68.1 32 0.0011 40.0 12.4 87 687-776 613-712 (713)
55 2qsv_A Uncharacterized protein 64.5 35 0.0012 33.2 10.3 67 687-762 19-85 (220)
56 3qis_A Inositol polyphosphate 64.0 62 0.0021 34.1 12.9 56 687-743 46-105 (366)
57 3idu_A Uncharacterized protein 56.9 40 0.0014 29.8 8.2 52 686-741 32-84 (127)
58 3isy_A Bsupi, intracellular pr 55.3 68 0.0023 28.0 9.2 71 686-762 17-104 (120)
59 1m1s_A WR4; structural genomic 49.6 69 0.0024 27.7 8.3 51 689-742 25-75 (116)
60 1z9l_A Vesicle-associated memb 49.3 51 0.0017 28.9 7.8 53 687-742 27-79 (128)
61 2x41_A Beta-glucosidase; hydro 47.5 31 0.0011 40.2 7.6 66 674-742 597-677 (721)
62 2qsv_A Uncharacterized protein 46.8 1.2E+02 0.004 29.3 10.7 52 687-741 134-185 (220)
63 1row_A SSP-19, MSP-domain prot 45.3 67 0.0023 27.4 7.5 49 690-741 18-66 (109)
64 3abz_A Beta-glucosidase I; gly 45.0 57 0.0019 38.6 9.4 155 559-740 618-795 (845)
65 1wic_A Hypothetical protein ri 44.6 46 0.0016 30.4 6.8 52 688-742 36-87 (152)
66 1msp_A MSP, major sperm protei 44.0 53 0.0018 28.8 6.9 52 688-742 26-77 (126)
67 1wgl_A TOLL-interacting protei 39.5 21 0.00072 27.0 2.9 36 567-602 3-38 (59)
68 1w8o_A Bacterial sialidase; 3D 38.3 2E+02 0.0069 32.1 12.6 62 677-742 364-426 (601)
69 2cri_A Vesicle-associated memb 36.3 62 0.0021 29.2 6.3 53 687-742 31-83 (147)
70 3e9t_A Na/Ca exchange protein; 30.0 1.5E+02 0.005 25.3 7.3 64 677-741 9-76 (114)
71 3ndz_E Endoglucanase D; cellot 29.4 2.6E+02 0.0088 23.6 9.3 32 687-718 15-47 (107)
72 1ni7_A ER75, hypothetical prot 27.4 46 0.0016 30.5 3.7 31 564-595 80-110 (155)
73 2kq1_A BH0266 protein; solutio 23.7 17 0.00058 31.7 0.1 49 691-741 57-109 (119)
74 3g0m_A Cysteine desulfuration 23.4 44 0.0015 30.1 2.7 33 561-594 70-102 (141)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=3.8e-119 Score=1045.28 Aligned_cols=623 Identities=39% Similarity=0.649 Sum_probs=559.7
Q ss_pred cCCcccccccchhhhcccCccccccccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccc
Q 004047 109 TTRSWEFVGLDEVAKQNWNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLC 188 (777)
Q Consensus 109 ~~~s~~~~gl~~~~~~~~~~~~~~~~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~ 188 (777)
|+++|+|+||... . .+|..+.+|+||+|||||||||++||+|.+.+++++|..|+|.|+.|.+|+...|
T Consensus 1 Tt~s~~flgl~~~-----~------~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~c 69 (649)
T 3i6s_A 1 TTHTSDFLKLNPS-----S------GLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMC 69 (649)
T ss_dssp CCSHHHHTTCCSS-----S------SHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSC
T ss_pred CCCChHHcCCCCc-----h------hhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCcccccccc
Confidence 5789999999742 3 7999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeecccccccccCCCCCCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecC
Q 004047 189 NKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWA 268 (777)
Q Consensus 189 n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~ 268 (777)
|+|++++++|.+++.... .+...+..+++|..||||||||||||+.+++.+++ |++.|.++||||+|+|++||+|+.
T Consensus 70 N~kiig~~~f~~~~~~~~--~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~-G~~~g~~~GvAP~A~l~~~kv~~~ 146 (649)
T 3i6s_A 70 NRKLIGANYFNKGILAND--PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHF-GYAPGTARGVAPRARLAVYKFSFN 146 (649)
T ss_dssp CSSEEEEEECCHHHHHHC--TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEET-TEEEEEECCSSTTCEEEEEECEET
T ss_pred ccceeeeEeccCcccccc--cccccCCCCCCCCCCcHHHHHHHHhCCCCcCcccc-ccccCceeEECCCCEEEEEeccCC
Confidence 999999999987765432 22234556788999999999999999988888877 888888999999999999999998
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCC
Q 004047 269 TPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNL 348 (777)
Q Consensus 269 ~~~g~~~~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ 348 (777)
. | +..+++++||+||+++|+||||||||.. ...+..+++.+++++|.++||+||+||||+|+...++.+.
T Consensus 147 ~--g-------~~~~~i~~Ai~~A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ 216 (649)
T 3i6s_A 147 E--G-------TFTSDLIAAMDQAVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNG 216 (649)
T ss_dssp T--E-------ECHHHHHHHHHHHHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCC
T ss_pred C--C-------CCHHHHHHHHHHHHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCC
Confidence 6 5 8999999999999999999999999983 5567789999999999999999999999999999999999
Q ss_pred CcceeeeccCccccccccceEeCCCcEEEeeeeccCCC-CcceeeEEecccccCCcCcCCCCCCCCCCCCCCcc--cceE
Q 004047 349 APWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNL-KKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKV--KGKI 425 (777)
Q Consensus 349 ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~g~i 425 (777)
+||+|+|||++.+|.|...+.+++++++.|++++.... ...+|+++.. ....|.+..+++.++ +|||
T Consensus 217 ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~----------~~~~C~~~~l~~~~vdl~GkI 286 (649)
T 3i6s_A 217 SPWILCVASGHTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK----------TLSDCSSEELLSQVENPENTI 286 (649)
T ss_dssp CTTSEEEEEEECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT----------TTTTCCCHHHHTTSSSGGGCE
T ss_pred CCceEEEeeeecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc----------cccccccccccccccccCCcE
Confidence 99999999999999999999999999999999987654 5678888865 356899988888877 9999
Q ss_pred EEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeec
Q 004047 426 VLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHT 505 (777)
Q Consensus 426 vl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~ 505 (777)
|+|+|+.+.+.+|..+++++|+.|+|++|+. .....+.+.+|..+|+..+|+.|++|++++.+++++|.+..+..+.
T Consensus 287 vlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~ 363 (649)
T 3i6s_A 287 VICDDNGDFSDQMRIITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDT 363 (649)
T ss_dssp EEECCCSCHHHHHHHHHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCC
T ss_pred EEEeCCCccHHHHHHHHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeecc
Confidence 9999999999999999999999999999986 4556677899999999999999999999999999999999999888
Q ss_pred CCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCc-ccccceeeccccchhhHHHHHHHHHHHHC
Q 004047 506 QPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDK-RIVKYTIFSGTSMSCPHVAAAAALLKAIH 584 (777)
Q Consensus 506 ~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~ 584 (777)
...+.++.||||||+...+++|||||+|||++|+++|+....+.....+. +...|..|||||||||||||++|||||+|
T Consensus 364 ~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~ 443 (649)
T 3i6s_A 364 KPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAH 443 (649)
T ss_dssp SSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhC
Confidence 89999999999999997789999999999999999999865544333332 44789999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCCCcccCC-CCCCCCCCceeeeccCccccCCCCceeeCchhhHHHhhhcCCCCCC----
Q 004047 585 PDWSSAAIRSALMTTAWMKNNKALPITNA-DGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFT---- 659 (777)
Q Consensus 585 P~~s~~~ik~~L~~TA~~~~~~g~~~~~~-~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~---- 659 (777)
|+|+|++||++||+||+++++.+.++.+. .+.+++++.||+|+||+.+|++||||||++.+||++|||++||+.+
T Consensus 444 P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~ 523 (649)
T 3i6s_A 444 PEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKT 523 (649)
T ss_dssp TTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHH
T ss_pred CCCCHHHHHHHHhcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCccccee
Confidence 99999999999999999999999998875 5678899999999999999999999999999999999999999876
Q ss_pred --CCccc--CCCCCCCCCCCCCCeeEeec-CCce-----EEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccC
Q 004047 660 --NPVFR--CPNKPPSALNLNYPSIAIPN-LNGT-----VIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHI 729 (777)
Q Consensus 660 --~~~~~--~~~~~~~~~~ln~ps~~~~~-~~~~-----~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~ 729 (777)
+..+. |+. ...+||||||+++. +.+. ++|+|||||||....+|++.++.|.|++|+|+|++|+|.+.
T Consensus 524 ~~~~~~~~~C~~---~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~ 600 (649)
T 3i6s_A 524 IARSSASHNCSN---PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNK 600 (649)
T ss_dssp HHTTTSCC-CCC---CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-
T ss_pred eecCCCcCCCCC---chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecC
Confidence 45556 985 45799999999987 5666 89999999999989999999999999999999999999989
Q ss_pred CcEEEEEEEEEECcccccccCCCceEEEEEEEEC--CccEEEeeEEEEe
Q 004047 730 GQKKSFTITVRLGSETTRQGLTKQYVFGWYRWTD--GLHLVRSPMAVSF 776 (777)
Q Consensus 730 ~~~~~~~v~~~~~~~~~~~~~~~~~~~G~~~~~~--~~~~v~~P~~~~~ 776 (777)
+|+++|+|||+.. ....+.|.||+|+|+| +.|.||+||+|++
T Consensus 601 ~~~~~f~v~~~~~-----~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~ 644 (649)
T 3i6s_A 601 NEKQSYTLTIRYI-----GDEGQSRNVGSITWVEQNGNHSVRSPIVTSP 644 (649)
T ss_dssp CCEEEEEEEEEEC-----CC---CCCEEEEEEEETTSCCEEEEEEEEEE
T ss_pred CCEEEEEEEEEec-----ccCCCceEEEEEEEEcCCCCeEEEEeEEEEE
Confidence 9999999999984 3446678999999999 8999999999986
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.4e-109 Score=966.68 Aligned_cols=609 Identities=40% Similarity=0.717 Sum_probs=517.9
Q ss_pred cCCcccccccchhhhcccCccccccccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccc
Q 004047 109 TTRSWEFVGLDEVAKQNWNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLC 188 (777)
Q Consensus 109 ~~~s~~~~gl~~~~~~~~~~~~~~~~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~ 188 (777)
|+++|+|+||++ .+|.+..+|+||+|||||||||++||+|+|+++++++..|+|.|+.+.+| .|
T Consensus 1 tt~s~~flGl~~-------------~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~---~~ 64 (621)
T 3vta_A 1 TTRSWDFLGFPL-------------TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNF---RC 64 (621)
T ss_dssp CCSHHHHTTCCT-------------TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSC---CC
T ss_pred CCCChhHcCCCc-------------cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCc---cc
Confidence 578999999974 57888899999999999999999999999999999999999999998877 59
Q ss_pred cceeeeeeecccccccccCCCCCCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecC
Q 004047 189 NKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWA 268 (777)
Q Consensus 189 n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~ 268 (777)
|+|++|+++|..+.... ..+..+++|++||||||||||||+..++.+.. |...+.++||||+|+|++||+|++
T Consensus 65 n~k~ig~~~~~~~~~~~------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~-g~~~g~~~GvAP~A~l~~~kv~~~ 137 (621)
T 3vta_A 65 NRKIIGARSYHIGRPIS------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLY-GLGLGTARGGVPLARIAAYKVCWN 137 (621)
T ss_dssp CSSEEEEEECCCSSSCC------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEET-TEEEEEECCSCTTSEEEEEECEET
T ss_pred CcceeeeeecccCCccC------CCCCCCCCCCCcCHHHHHHHHhCcCCCCcccc-ccccccEEEECCCCEEEEEEeecC
Confidence 99999999998764332 23445788999999999999999987777776 777788999999999999999998
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCC
Q 004047 269 TPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNL 348 (777)
Q Consensus 269 ~~~g~~~~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ 348 (777)
. | |..+++++||++|+++|+||||||||+.....+..+++++++++|.++||+||+||||+|+...++.+.
T Consensus 138 ~--g-------~~~~di~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~ 208 (621)
T 3vta_A 138 D--G-------CSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASL 208 (621)
T ss_dssp T--E-------ECHHHHHHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCC
T ss_pred C--C-------CCHHHHHHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCC
Confidence 7 5 889999999999999999999999999656667788999999999999999999999999999999999
Q ss_pred CcceeeeccCccccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEE
Q 004047 349 APWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLC 428 (777)
Q Consensus 349 ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~ 428 (777)
+||+++|++++.++.+...+.++++..+.+.++.... ...++++.+.+.............|.+..+++.+++|||++|
T Consensus 209 a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~ 287 (621)
T 3vta_A 209 SPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFD-NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVC 287 (621)
T ss_dssp CTTSEEEEEECCSEEEEEEEEETTSCEEEEBCCCCSC-CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEEC
T ss_pred CCCceeEEEeeccccceeeEEeccCceeeeeecccCC-CcccccccccccccccccccccccccccccccccccceEEEE
Confidence 9999999999999999999999999999988876543 456777777766555445556678999999999999999999
Q ss_pred ecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCC
Q 004047 429 MRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPA 508 (777)
Q Consensus 429 ~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~ 508 (777)
+++. ..+.......|+.+++++++... ..+.+.+|...++..++..+..|+..+..+.+.+....+. .....
T Consensus 288 ~~~~---~~~~~~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~ 359 (621)
T 3vta_A 288 EASF---GPHEFFKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASA 359 (621)
T ss_dssp SSCC---CHHHHHHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTC
T ss_pred ecCC---ChhHHhhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCC
Confidence 8753 45666778899999999987543 3456789999999999999999999999988888665544 45668
Q ss_pred CccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCC
Q 004047 509 PFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWS 588 (777)
Q Consensus 509 ~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s 588 (777)
+.++.||||||+...++++||||+|||++|+|+++...... .......|..|||||||||||||++|||||+||+|+
T Consensus 360 ~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~---~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~s 436 (621)
T 3vta_A 360 PVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVG---GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWS 436 (621)
T ss_dssp CCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSSCBT---TBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CceeeecCCCCCCCCCCeeccccccCCcceEeecCcccccc---CcCCCCcceEecCccccchhhhhHHHHHHHHCCCCC
Confidence 89999999999987789999999999999999998644322 122346899999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCCCceeeCchhhHHHhhhcCCCCCC------CCc
Q 004047 589 SAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFT------NPV 662 (777)
Q Consensus 589 ~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~------~~~ 662 (777)
|++||++||+||++++..+ .++.+++||+|+||+.+|++||||||+...||+.|||+++|+++ +..
T Consensus 437 pa~IksaLmtTA~~~~~~~--------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~ 508 (621)
T 3vta_A 437 PAAIKSALMTTASPMNARF--------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDY 508 (621)
T ss_dssp HHHHHHHHHHTCBCCCTTT--------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC--------------------
T ss_pred HHHHHHHHHhcCCcccccC--------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccc
Confidence 9999999999999887653 45678999999999999999999999999999999999999877 344
Q ss_pred ccCCCCC-CCCCCCCCCeeEee---cCCceEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEE
Q 004047 663 FRCPNKP-PSALNLNYPSIAIP---NLNGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTIT 738 (777)
Q Consensus 663 ~~~~~~~-~~~~~ln~ps~~~~---~~~~~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~ 738 (777)
..|+... ....+||||||++. ++..+++|+|||||+|....+|++++++|.|++|+|+|++|+|++.+|+++|+||
T Consensus 509 ~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt 588 (621)
T 3vta_A 509 SACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLT 588 (621)
T ss_dssp ---------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEE
T ss_pred cccCCCCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEE
Confidence 5676542 34679999999985 5667899999999999999999999999999999999999999989999999999
Q ss_pred EEECcccccccCCCceEEEEEEEECCccEEEeeEEEEe
Q 004047 739 VRLGSETTRQGLTKQYVFGWYRWTDGLHLVRSPMAVSF 776 (777)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~v~~P~~~~~ 776 (777)
|+. ..++.|+||+|+|+|+.|.||+||+|+.
T Consensus 589 ~~~-------~~~~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 589 VRG-------SIKGFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp EEE-------CCCSSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred EEe-------cCCCceEEEEEEEEcCCEEEEeCEEEEE
Confidence 987 3578899999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.1e-82 Score=771.01 Aligned_cols=542 Identities=23% Similarity=0.273 Sum_probs=428.1
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCcc----------ccccccceeeeeeecccccc
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAF----------NSSLCNKKIIGARYYLKGFE 203 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f----------~~~~~n~kiig~~~~~~~~~ 203 (777)
.+|..+++|+||+|||||||||++||+|.+. ..|++.|..+..| ....||+|++++++|.++.
T Consensus 8 ~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~- 80 (926)
T 1xf1_A 8 TLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG- 80 (926)
T ss_dssp HHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS-
T ss_pred HHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccCC-
Confidence 7999999999999999999999999999853 4677777644332 1347999999999987631
Q ss_pred cccCCCCCCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHH
Q 004047 204 QLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEA 283 (777)
Q Consensus 204 ~~~~~~~~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~ 283 (777)
...|+.||||||||||||+...+.+. .+.+.||||+|+|++||+|++...+ +..+
T Consensus 81 -------------~~~D~~gHGThVAgiiAg~~~~~~~~-----~~~~~GvAP~A~l~~~kv~~~~g~~-------~~~~ 135 (926)
T 1xf1_A 81 -------------KTAVDQEHGTHVSGILSGNAPSETKE-----PYRLEGAMPEAQLLLMRVEIVNGLA-------DYAR 135 (926)
T ss_dssp -------------CCCCSSTTTTHHHHSSCCCCCCCCSC-----SCCTTTTCTTSEEEEEECCCCSCHH-------HHHH
T ss_pred -------------CCCCCCCcHHHHHHHHhCCCccCccc-----CCceEEECCCCEEEEEEeecCCCCC-------CcHH
Confidence 12288999999999999986543321 2456899999999999999876222 5567
Q ss_pred HHHHHHHHHHhCCceEEEeecCCCCC-CCCCccHHHHHHHHHHhCCcEEEEecCCCCCC-------------CCCCcCC-
Q 004047 284 DMLAAIDDAIRDGVHVLSISIGTNQP-FAFNRDGIAIGALNAVKHNILVACSAGNSGPA-------------PSSLSNL- 348 (777)
Q Consensus 284 ~i~~ai~~a~~~gvdVIn~SlG~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~-------------~~~~~~~- 348 (777)
++++||+||+++|+||||||||+... .....+++..+++.|.++||+||+||||+|+. ..++.++
T Consensus 136 ~i~~Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA 215 (926)
T 1xf1_A 136 NYAQAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPA 215 (926)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCT
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcc
Confidence 89999999999999999999998432 34566788899999999999999999999963 2344555
Q ss_pred -CcceeeeccCccccccccceEe-CCCcEEEeeeecc---CCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccc
Q 004047 349 -APWLITVGAGSLDRDFVGPVVL-GTGMEIIGKTVTP---YNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKG 423 (777)
Q Consensus 349 -ap~vitVgAs~~~~~~~~~~~~-~~~~~~~g~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g 423 (777)
+||+|+|||++.++.+...+.+ +++....+.++.. ......+++++... .|.+..+ .+++|
T Consensus 216 ~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~G 281 (926)
T 1xf1_A 216 AADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKG 281 (926)
T ss_dssp TTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTT
T ss_pred cCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCC
Confidence 6999999999999999888887 5554444444432 22356788888654 3766555 68999
Q ss_pred eEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCc-cccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEE
Q 004047 424 KIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE-YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTV 502 (777)
Q Consensus 424 ~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~-~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~ 502 (777)
|||||+|+.|.+.+|..+++.+|+.|+|++|+...... .......+|..+++..+|..|.+ .+..++++......
T Consensus 282 kivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~ 357 (926)
T 1xf1_A 282 KIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKV 357 (926)
T ss_dssp SEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEE
T ss_pred eEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEeccccee
Confidence 99999999999999999999999999999998654332 23456789999999999998874 45555655555545
Q ss_pred eecCCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHH
Q 004047 503 LHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKA 582 (777)
Q Consensus 503 ~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q 582 (777)
......+.++.||||||+. ++++||||+|||++|+++++. +.|..|||||||||||||++|||+|
T Consensus 358 ~~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q 422 (926)
T 1xf1_A 358 LPTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQK 422 (926)
T ss_dssp EECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHH
T ss_pred cccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHH
Confidence 6666788999999999996 799999999999999999987 6899999999999999999999965
Q ss_pred ----HCCCCCHHH----HHHHHHhcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCCCceeeCchhhHHHhhhcC
Q 004047 583 ----IHPDWSSAA----IRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSH 654 (777)
Q Consensus 583 ----~~P~~s~~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~ 654 (777)
.||.|+|++ ||++||+||+++...+ ....+++++||+|+||+.+|+++.+ |||..
T Consensus 423 ~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~ 485 (926)
T 1xf1_A 423 QYETQYPDMTPSERLDLAKKVLMSSATALYDED------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDK 485 (926)
T ss_dssp HHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEES
T ss_pred HHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC------CCccCChhccCCCccCHHHhcCCCe-----------EEEcC
Confidence 599999997 9999999999876431 1235678899999999999999855 56765
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCCeeEeecCCceEEEEEEEEecCCCC--eeEEEEeeC--CCccEEEEecceEEEc---
Q 004047 655 GFSFTNPVFRCPNKPPSALNLNYPSIAIPNLNGTVIVKRTVTNVGGSK--SVYFFSAKP--PMGVSVKANPSILFFD--- 727 (777)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~t~~~tvtn~~~~~--~ty~~~~~~--~~g~~v~v~p~~~~~~--- 727 (777)
+++. ++|.++++....+++|||||+|+.+ .+|++++.. |.+..++|+|..|.|.
T Consensus 486 ~~~~-------------------~~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~ 546 (926)
T 1xf1_A 486 DNTS-------------------SKVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQ 546 (926)
T ss_dssp SSSC-------------------SCEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCE
T ss_pred CCCc-------------------ceeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCC
Confidence 4331 2455666667899999999999854 567777764 6788888888766554
Q ss_pred ----cCCcEEEEEEEEEECcc--c-ccccCCCceEEEEEEEE--CCcc-EEEeeEEEEe
Q 004047 728 ----HIGQKKSFTITVRLGSE--T-TRQGLTKQYVFGWYRWT--DGLH-LVRSPMAVSF 776 (777)
Q Consensus 728 ----~~~~~~~~~v~~~~~~~--~-~~~~~~~~~~~G~~~~~--~~~~-~v~~P~~~~~ 776 (777)
++||+++|+|+|+...- . +..++++.|+||+|+|+ ++.| .||+||++..
T Consensus 547 ~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 547 KITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred eEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 35999999999997410 0 11356778899999999 5555 5999999864
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.3e-60 Score=545.70 Aligned_cols=369 Identities=29% Similarity=0.430 Sum_probs=285.9
Q ss_pred CCcEEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhccceEEEeeeeEeEEEEEcCHHHHHHh-----------hc
Q 004047 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARL-----------SE 90 (777)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L-----------~~ 90 (777)
++-.|||.|++.. ..+...++++.+ ..+++++|+ .|+||+++++.+++++| ++
T Consensus 34 ~~~~~iV~~~~~~--------~~~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~ 97 (539)
T 3afg_A 34 QEVSTIIMFDNQA--------DKEKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQ 97 (539)
T ss_dssp CEEEEEEEESSHH--------HHHHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCC
T ss_pred CceEEEEEECCCC--------CHHHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhcccccccccc
Confidence 4457999999654 112222333332 246889997 59999999999999999 88
Q ss_pred CCCeEEEEeCCCCccccccCCcccccccchhhhcccCccccccccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 004047 91 LEEVVSVYPSHPEKYSLQTTRSWEFVGLDEVAKQNWNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVP 170 (777)
Q Consensus 91 ~~~V~~V~~~~~~~~~~~~~~s~~~~gl~~~~~~~~~~~~~~~~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~ 170 (777)
+|+|++|+++. .+++... ..++.... .. ...+.+|..+++|+||+|||||||||++||+|.+
T Consensus 98 ~~~V~~v~~d~--~~~~~~~----~~~~~~~~----~~-~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~------- 159 (539)
T 3afg_A 98 LSGVQFIQEDY--VVKVAVE----TEGLDESA----AQ-VMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG------- 159 (539)
T ss_dssp CTTEEEEEECC--EEECC-------------------C-CBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT-------
T ss_pred CCCeeEEEecc--cccccCc----cccCCccc----cc-cCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC-------
Confidence 99999999999 7765432 12222110 00 0112789999999999999999999999999963
Q ss_pred CCcccceecCCccccccccceeeeeeecccccccccCCCCCCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCc
Q 004047 171 KSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGT 250 (777)
Q Consensus 171 ~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~ 250 (777)
++++.++|..+ ...+.|+.||||||||||+|+.. ...+.
T Consensus 160 --------------------~i~~~~d~~~~-------------~~~~~D~~gHGThVAgiiag~~~--------~~~g~ 198 (539)
T 3afg_A 160 --------------------KVIGWVDFVNG-------------KTTPYDDNGHGTHVASIAAGTGA--------ASNGK 198 (539)
T ss_dssp --------------------TEEEEEETTTC-------------CSSCCBSSSHHHHHHHHHHCCCG--------GGTTT
T ss_pred --------------------CEeeeEECCCC-------------CCCCCCCCCCHHHHHHHHhCcCc--------cCCCC
Confidence 35566666543 12567899999999999999731 12344
Q ss_pred eeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHhC----CceEEEeecCCCCCCCCCccHHHHHHHHHHh
Q 004047 251 ASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD----GVHVLSISIGTNQPFAFNRDGIAIGALNAVK 326 (777)
Q Consensus 251 ~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~~----gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~ 326 (777)
+.||||+|+|+++|++++. | .+..+++++||+||+++ |++|||||||... .....+++..+++++.+
T Consensus 199 ~~GvAp~A~l~~~kv~~~~--g------~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~-~~~~~~~l~~ai~~a~~ 269 (539)
T 3afg_A 199 YKGMAPGAKLVGIKVLNGQ--G------SGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ-SSDGTDSLSQAVNNAWD 269 (539)
T ss_dssp TCCSCTTCEEEEEECSCTT--S------EEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS-CCCSCSHHHHHHHHHHH
T ss_pred EEEECCCCEEEEEEeecCC--C------CcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC-CCccchHHHHHHHHHHh
Confidence 6899999999999999876 4 46789999999999986 9999999999833 34456788899999999
Q ss_pred CCcEEEEecCCCCCCCCCCcC--CCcceeeeccCccccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcC
Q 004047 327 HNILVACSAGNSGPAPSSLSN--LAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVH 404 (777)
Q Consensus 327 ~Gi~vV~aAGN~G~~~~~~~~--~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~ 404 (777)
+|++||+||||+|+...++.. ..+++|+|||++.
T Consensus 270 ~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~-------------------------------------------- 305 (539)
T 3afg_A 270 AGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK-------------------------------------------- 305 (539)
T ss_dssp TTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT--------------------------------------------
T ss_pred cCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC--------------------------------------------
Confidence 999999999999986555443 4589999998542
Q ss_pred cCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHH
Q 004047 405 QNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHE 484 (777)
Q Consensus 405 ~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~ 484 (777)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeec
Q 004047 485 YIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFS 564 (777)
Q Consensus 485 ~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~s 564 (777)
.+.++.||||||+. ++++||||+|||++|+++++...... ......|..++
T Consensus 306 -----------------------~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~s 356 (539)
T 3afg_A 306 -----------------------YDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAP 356 (539)
T ss_dssp -----------------------TSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEEC
T ss_pred -----------------------CcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCCC----CCCcccccccC
Confidence 24788999999987 69999999999999999986532110 01113699999
Q ss_pred cccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCCC
Q 004047 565 GTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPG 637 (777)
Q Consensus 565 GTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 637 (777)
|||||||||||++|||+|++|+|+|++||++|++||+++...+ .+++.||+|+||+.+|++..
T Consensus 357 GTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 357 GTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG----------CSBTTTBTCBCCHHHHHTGG
T ss_pred chHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC----------CCccCccCCccCHHHHhhhc
Confidence 9999999999999999999999999999999999999875321 25678999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=2.5e-58 Score=510.57 Aligned_cols=346 Identities=25% Similarity=0.332 Sum_probs=274.3
Q ss_pred CCcEEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhccceEEEeeeeEeEEEEEcCHHHHHHhhcCCCeEEEEeCC
Q 004047 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSELEEVVSVYPSH 101 (777)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~ 101 (777)
++.+|||.||+.... .+++++. ..+++++|.. +++|+++++++++++|+++|+|++|++++
T Consensus 1 ~~~~~iV~~~~~~~~-----------~~~~~~~-------g~~v~~~~~~-~~~~~~~~~~~~~~~L~~~p~V~~v~~~~ 61 (395)
T 2z2z_A 1 NTIRVIVSVDKAKFN-----------PHEVLGI-------GGHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDH 61 (395)
T ss_dssp CEEEEEEEECTTTCC-----------HHHHHHT-------TCEEEEECSS-SSEEEEEEEGGGHHHHHTSTTEEEEEECC
T ss_pred CcEEEEEEECCCccH-----------HHHHHHc-------CCEEEEEecc-CCEEEEEECHHHHHHHHcCCCceEEEEee
Confidence 357899999987511 2233332 2468889976 99999999999999999999999999999
Q ss_pred CCccccccCCcc-----------cccccchhhhcccCccccccccccccCCCCc--eEEEEeecCCCCCCCCCCCCCCCC
Q 004047 102 PEKYSLQTTRSW-----------EFVGLDEVAKQNWNHFNMGQDLLSKARYGQD--VIVGLVDNGVWPESKSFSDEGMGP 168 (777)
Q Consensus 102 ~~~~~~~~~~s~-----------~~~gl~~~~~~~~~~~~~~~~~~~~g~~G~G--V~VgVIDtGid~~Hp~f~~~~~~~ 168 (777)
.++++....+ ..|++..+ . .+.+|..+ +|+| |+|||||||||++||+|.++
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~w~~~~i---~------~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~---- 125 (395)
T 2z2z_A 62 --QAVLLGKPSWLGGGSTQPAQTIPWGIERV---K------APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---- 125 (395)
T ss_dssp --EEEECCEECC------CCSCCCCHHHHHT---T------CGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG----
T ss_pred --eecccCCCCcccccccCccccCCcchhhc---C------HHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc----
Confidence 7776533221 12333322 1 12789988 9999 99999999999999999742
Q ss_pred CCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCC
Q 004047 169 VPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAE 248 (777)
Q Consensus 169 ~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~ 248 (777)
+...++|..+... .+.....|+.||||||||||+|.. ++
T Consensus 126 -----------------------~~~~~~~~~~~~~--------~~~~~~~d~~gHGT~vAgiia~~~-n~--------- 164 (395)
T 2z2z_A 126 -----------------------IAWCVSTLRGKVS--------TKLRDCADQNGHGTHVIGTIAALN-ND--------- 164 (395)
T ss_dssp -----------------------EEEEEECGGGCCB--------CCHHHHBCSSSHHHHHHHHHHCCC-SS---------
T ss_pred -----------------------cccCccccCCccc--------CCCCCCCCCCCCHHHHHHHHHeec-CC---------
Confidence 3334444332100 001124678999999999999872 11
Q ss_pred CceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHhC--------------------CceEEEeecCCCC
Q 004047 249 GTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD--------------------GVHVLSISIGTNQ 308 (777)
Q Consensus 249 g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~~--------------------gvdVIn~SlG~~~ 308 (777)
..+.||||+|+|+.+|++++. | .+..+++++||+||+++ +++|||||||...
T Consensus 165 ~g~~GvAp~a~l~~~kv~~~~--g------~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~ 236 (395)
T 2z2z_A 165 IGVVGVAPGVQIYSVRVLDAR--G------SGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA 236 (395)
T ss_dssp SSCCCSSTTCEEEEEECSCTT--S------EEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC
T ss_pred CceEEECCCCEEEEEEEecCC--C------CccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC
Confidence 124699999999999999876 4 46789999999999988 9999999999832
Q ss_pred CCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcceeeeccCccccccccceEeCCCcEEEeeeeccCCCCc
Q 004047 309 PFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKK 388 (777)
Q Consensus 309 ~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 388 (777)
....+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 237 ----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------------------------- 284 (395)
T 2z2z_A 237 ----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS---------------------------- 284 (395)
T ss_dssp ----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT----------------------------
T ss_pred ----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC----------------------------
Confidence 235677788889999999999999999876666667799999998542
Q ss_pred ceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCcc
Q 004047 389 MHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHY 468 (777)
Q Consensus 389 ~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~ 468 (777)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCC
Q 004047 469 LPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSP 548 (777)
Q Consensus 469 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~ 548 (777)
.+.++.||+||| +|+|||++|+|+++.
T Consensus 285 ---------------------------------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~---- 311 (395)
T 2z2z_A 285 ---------------------------------------NDNIASFSNRQP----------EVSAPGVDILSTYPD---- 311 (395)
T ss_dssp ---------------------------------------TSCBCTTSCSSC----------SEEEECSSEEEEETT----
T ss_pred ---------------------------------------CCCCCcccCCCC----------CEEeCCCCeeeecCC----
Confidence 247889999998 679999999999987
Q ss_pred CcccCCcccccceeeccccchhhHHHHHHHHHHHHCC-------------CCCHHHHHHHHHhcccccCCCCCcccCCCC
Q 004047 549 SKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHP-------------DWSSAAIRSALMTTAWMKNNKALPITNADG 615 (777)
Q Consensus 549 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-------------~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~ 615 (777)
+.|..++|||||||||||++|||+|++| .|++.+||++|++||+++...|
T Consensus 312 ---------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g-------- 374 (395)
T 2z2z_A 312 ---------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG-------- 374 (395)
T ss_dssp ---------TEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS--------
T ss_pred ---------CceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC--------
Confidence 6899999999999999999999999999 9999999999999999875322
Q ss_pred CCCCCCceeeeccCccccCCC
Q 004047 616 SIATPFSFGSGHFRPTKAADP 636 (777)
Q Consensus 616 ~~~~~~~~G~G~vn~~~Al~~ 636 (777)
.+..||||+||+.+|++.
T Consensus 375 ---~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 375 ---WDADYGYGVVRAALAVQA 392 (395)
T ss_dssp ---SBTTTBTCBCCHHHHHHH
T ss_pred ---CCCCccCceeCHHHHHHH
Confidence 457899999999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=1.1e-56 Score=510.25 Aligned_cols=337 Identities=19% Similarity=0.249 Sum_probs=261.9
Q ss_pred cceEEEeeeeEeEEEEEcCHHHHHHhhc-CCCeEEEEeCCCCccccccCCccc----------ccccchhhhcccCcccc
Q 004047 63 ASHLYSYKHSINGFSAVLTPDEAARLSE-LEEVVSVYPSHPEKYSLQTTRSWE----------FVGLDEVAKQNWNHFNM 131 (777)
Q Consensus 63 ~~i~~~y~~~~ng~s~~~~~~~~~~L~~-~~~V~~V~~~~~~~~~~~~~~s~~----------~~gl~~~~~~~~~~~~~ 131 (777)
.+++++|.. |++|+++++++++++|++ +|+|++|+++. .+++....... .|++..+. .
T Consensus 66 ~~v~~~~~~-~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~w~l~~i~--------~ 134 (471)
T 3t41_A 66 LNVVYNIPE-LHVAQIKMTKMHANALANYKNDIKYINATC--STCITSEKTIDRTSNESLFSRQWDMNKIT--------N 134 (471)
T ss_dssp CEEEEEEGG-GTEEEEEECHHHHHHHHTCTTTEEEEEECC--SSCBCCCCCCCC---CCSCCCCHHHHTTT--------T
T ss_pred CEEEEecCC-ccEEEEEeCHHHHHHHHhcCCCCcEEEecc--eeccccccccccCCCCccccccccHhhcc--------C
Confidence 457788865 999999999999999999 99999999999 77765433211 12222220 0
Q ss_pred ccccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCC
Q 004047 132 GQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNA 211 (777)
Q Consensus 132 ~~~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 211 (777)
...+|..+.+|+||+|||||||||++||+|.++- |.+. ..++....|... ....
T Consensus 135 ~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~-------------~~~~~~~~~~~~------~~~~ 188 (471)
T 3t41_A 135 NGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STDS-------------KNLVPLNGFRGT------EPEE 188 (471)
T ss_dssp TTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC-------------EECCCTTCGGGC------CTTC
T ss_pred cHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC-------------cccccCCCccCC------Cccc
Confidence 1268999999999999999999999999997531 1110 011111111111 0111
Q ss_pred CCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHH
Q 004047 212 TEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDD 291 (777)
Q Consensus 212 ~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~ 291 (777)
..+...+.|..||||||||||+|+. .+.||||+|+|+++|++++. .+..+++++||+|
T Consensus 189 ~~~~~~~~d~~gHGT~vAgiiaa~g-------------~~~GvAp~a~l~~~kv~~~~---------~~~~~~i~~ai~~ 246 (471)
T 3t41_A 189 TGDVHDVNDRKGHGTMVSGQTSANG-------------KLIGVAPNNKFTMYRVFGSK---------KTELLWVSKAIVQ 246 (471)
T ss_dssp CCCTTCCCCSSSHHHHHHHHHHCBS-------------SSBCSSTTSCEEEEECCSSS---------CCCHHHHHHHHHH
T ss_pred CCCCCCCcCCCCccchhhheeecCC-------------ceeEECCCCeEEEEEeccCC---------CCcHHHHHHHHHH
Confidence 1223457789999999999999862 25799999999999999874 3789999999999
Q ss_pred HHhCCceEEEeecCCCCCCC------------CCccHHHHHHHHHHhCCcEEEEecCCCCCCCCC---------------
Q 004047 292 AIRDGVHVLSISIGTNQPFA------------FNRDGIAIGALNAVKHNILVACSAGNSGPAPSS--------------- 344 (777)
Q Consensus 292 a~~~gvdVIn~SlG~~~~~~------------~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~--------------- 344 (777)
|+++|++|||||||...... ...+.+..++..+.++|++||+||||+|.....
T Consensus 247 a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~ 326 (471)
T 3t41_A 247 AANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGE 326 (471)
T ss_dssp HHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSE
T ss_pred HHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCc
Confidence 99999999999999731111 123567788888999999999999999976442
Q ss_pred ---CcCCCcceeeeccCccccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcc
Q 004047 345 ---LSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKV 421 (777)
Q Consensus 345 ---~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 421 (777)
.+...+++|+|||++.
T Consensus 327 ~~~~Pa~~~~vitVgA~~~------------------------------------------------------------- 345 (471)
T 3t41_A 327 VKDVPASMDNVVTVGSTDQ------------------------------------------------------------- 345 (471)
T ss_dssp EEEETTTSTTEEEEEEECT-------------------------------------------------------------
T ss_pred eeeccccCCCeEEEEeeCC-------------------------------------------------------------
Confidence 3345588999987542
Q ss_pred cceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceE
Q 004047 422 KGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQART 501 (777)
Q Consensus 422 ~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~ 501 (777)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCCccccccCCCCCCCCCCCcCCceeeCCCc----------------------EEEcccCCCCCCcccCCccccc
Q 004047 502 VLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLN----------------------ILAAWSEASSPSKLAFDKRIVK 559 (777)
Q Consensus 502 ~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~ 559 (777)
.+.+++||+|||+. |||+|||++ |+++++. +.
T Consensus 346 ------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~ 399 (471)
T 3t41_A 346 ------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN-------------GR 399 (471)
T ss_dssp ------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SS
T ss_pred ------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCC-------------CC
Confidence 24788999999964 599999987 8999877 78
Q ss_pred ceeeccccchhhHHHHHHHHHHHHCC-CCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCCC
Q 004047 560 YTIFSGTSMSCPHVAAAAALLKAIHP-DWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPG 637 (777)
Q Consensus 560 y~~~sGTSmAaP~VAG~aALl~q~~P-~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 637 (777)
|..++|||||||||||++|||+|++| .++|++||++|++||.+... .++..||||+||+.+|++..
T Consensus 400 ~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 400 YIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC------------CCHHHHTTCBBCHHHHTTTT
T ss_pred EEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC------------CCcCccccChhCHHHHHHHH
Confidence 99999999999999999999999999 89999999999999997643 36778999999999999853
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.1e-55 Score=494.14 Aligned_cols=378 Identities=20% Similarity=0.267 Sum_probs=274.0
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|.. +|+||+|||||||||++||+|.++ ++..+++... .
T Consensus 15 ~~w~~--~g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~~~-----------~ 54 (441)
T 1y9z_A 15 VLSDS--QAGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSGT-----------G 54 (441)
T ss_dssp SSCCT--TGGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTTS-----------C
T ss_pred hhhhc--CCCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccCCC-----------C
Confidence 78875 478999999999999999999743 1111111110 1
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCC--eEEEEEeecCCCCCCccCCCCCCHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLA--RLAIYKACWATPKASKAAGNTCFEADMLAAIDD 291 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A--~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~ 291 (777)
+...+.|..||||||||||+|... . ..+.||||+| +|+.+|++++. | .+..+++++||+|
T Consensus 55 ~~~~~~d~~gHGT~vAgiia~~~~---------~-~g~~GvAP~a~~~l~~~kv~~~~--g------~~~~~~~~~ai~~ 116 (441)
T 1y9z_A 55 NWYQPGNNNAHGTHVAGTIAAIAN---------N-EGVVGVMPNQNANIHIVKVFNEA--G------WGYSSSLVAAIDT 116 (441)
T ss_dssp CTTCCCSSCCHHHHHHHHHHCCCS---------S-SBCCCSSCSSCSEEEEEECEETT--E------ECCSSCHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHHHhcccC---------C-CCceEecCCCCCEEEEEEEeCCC--C------CcCHHHHHHHHHH
Confidence 123567889999999999999731 1 2257999995 99999999876 4 4677899999999
Q ss_pred HHhC-CceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcceeeeccCccccccccceEe
Q 004047 292 AIRD-GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVL 370 (777)
Q Consensus 292 a~~~-gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~ 370 (777)
|+++ |++|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+.........
T Consensus 117 a~~~~g~~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~ 192 (441)
T 1y9z_A 117 CVNSGGANVVTMSLGGSG----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQY 192 (441)
T ss_dssp HHHTTCCSEEEECCCBSC----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCC
T ss_pred HHHhcCCcEEEeCCCCCC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccC
Confidence 9999 9999999999832 2345677888899999999999999998766666677999999999887654443333
Q ss_pred CCCcE-----------------------EEeeeeccCCC---Cccee--eEEecccccCCcCcCCCCCCCCC--CCCCCc
Q 004047 371 GTGME-----------------------IIGKTVTPYNL---KKMHP--LVYAADVVVPGVHQNETNQCLPG--SLTPEK 420 (777)
Q Consensus 371 ~~~~~-----------------------~~g~~~~~~~~---~~~~~--~v~~~~~~~~~~~~~~~~~c~~~--~~~~~~ 420 (777)
+.... +.|.+++.... ...++ +.+..+.. ..........|... .++..+
T Consensus 193 g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~-~g~~~~~~~~C~~~~~~~~~~~ 271 (441)
T 1y9z_A 193 TDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI-NASATGALAECTVNGTSFSCGN 271 (441)
T ss_dssp CTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC-CCEEEEEEEEEEEETTEEECCC
T ss_pred CCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCcccccccc-ccccccchhccccccccccCCC
Confidence 32221 22222221110 00000 11111110 00001122457644 557889
Q ss_pred ccceEEEEecCCc-----chhhhhHHHhhcCceEEEEecCCCCCCc------cccCCccccEEEEeHHHHHHHHHHHhcC
Q 004047 421 VKGKIVLCMRGSG-----FKLSKGMEVKRAGGVGLILGNSPANGNE------YSYDAHYLPATAVLYDDAIKIHEYIKST 489 (777)
Q Consensus 421 ~~g~ivl~~~g~~-----~~~~~~~~~~~~Ga~gvi~~n~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~~~~~~ 489 (777)
++|||++|+|+.+ .+.+|..+++++|+.++|+||+...... .......+|.++++..+|+.|++|+...
T Consensus 272 ~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~ 351 (441)
T 1y9z_A 272 MANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS 351 (441)
T ss_dssp CTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE
T ss_pred ccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC
Confidence 9999999999876 6789999999999999999998542211 1223467999999999999998865321
Q ss_pred CCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccch
Q 004047 490 NNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMS 569 (777)
Q Consensus 490 ~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmA 569 (777)
+ .+ ++... +.|..+||||||
T Consensus 352 ----~-----------------------------------t~--------~~~~~-------------~~y~~~sGTSmA 371 (441)
T 1y9z_A 352 ----T-----------------------------------TV--------SNQGN-------------QDYEYYNGTSMA 371 (441)
T ss_dssp ----E-----------------------------------EE--------EEEEE-------------ESEEEECSHHHH
T ss_pred ----c-----------------------------------cc--------ccccC-------------CCceeecccccC
Confidence 0 00 11111 689999999999
Q ss_pred hhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCCCceeeCchhhHHH
Q 004047 570 CPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLL 649 (777)
Q Consensus 570 aP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~ 649 (777)
||||||++|||+|+||+|+|++||++||+||++++..+ ++.+||+|+||+.+|+ ||+.
T Consensus 372 aP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~-----------~~~~ 429 (441)
T 1y9z_A 372 TPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK-----------AYLD 429 (441)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH-----------HHHH
T ss_pred CcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH-----------HHHH
Confidence 99999999999999999999999999999999886543 3567999999999995 5999
Q ss_pred hhhcCCC
Q 004047 650 YLCSHGF 656 (777)
Q Consensus 650 ~~~~~~~ 656 (777)
|||++++
T Consensus 430 ~lc~~~~ 436 (441)
T 1y9z_A 430 ESCTGPT 436 (441)
T ss_dssp HCTTCC-
T ss_pred hhhcCCC
Confidence 9998765
No 8
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1e-56 Score=515.17 Aligned_cols=340 Identities=21% Similarity=0.217 Sum_probs=56.2
Q ss_pred EEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhccceEEEeeeeEeEEEEEcCHHHHHHhhcCCCeEEEEeCCCCc
Q 004047 25 VYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSELEEVVSVYPSHPEK 104 (777)
Q Consensus 25 ~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~~~~ 104 (777)
+|||+||+.... ...+.+.+.+....... ....++++.|++.|+||+++++++++++|+++|+|++|+++. .
T Consensus 77 ~YIV~lk~~~~~-----~~~~~~~~~l~a~~~~~-g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~--~ 148 (692)
T 2p4e_P 77 TYVVVLKEETHL-----SQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDS--S 148 (692)
T ss_dssp EEEEEECTTCCH-----HHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEE--E
T ss_pred cEEEEECCCCCH-----HHHHHHHHHHHHHHhhc-ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEecc--c
Confidence 899999988732 23333444444332211 112478999999999999999999999999999999999999 6
Q ss_pred cccccCCcccccccchhhhcccCccccccccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccc
Q 004047 105 YSLQTTRSWEFVGLDEVAKQNWNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFN 184 (777)
Q Consensus 105 ~~~~~~~s~~~~gl~~~~~~~~~~~~~~~~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~ 184 (777)
+..+ .. .|++..+...... ...|..+.+|+||+|||||||||++||+|.++.. |. +|+
T Consensus 149 v~~~-~~---pWgL~~i~~~~~~-----~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~~ 206 (692)
T 2p4e_P 149 VFAQ-SI---PWNLERITPPRYR-----ADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------DFE 206 (692)
T ss_dssp EEEC----------------------------------------------------------------------------
T ss_pred cccC-CC---Ccchhhccccccc-----ccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------ccc
Confidence 6542 22 2466554221110 1468888999999999999999999999975410 10 010
Q ss_pred cccccceeeeeeecccccccccCCCCCCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEE
Q 004047 185 SSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYK 264 (777)
Q Consensus 185 ~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~k 264 (777)
.+.+. .+ ......+.|..||||||||||+|+. .||||+|+|+++|
T Consensus 207 ------------~~~d~----dg----~~~~~~~~D~~GHGTHVAGiIAg~~---------------~GVAP~A~L~~vK 251 (692)
T 2p4e_P 207 ------------NVPEE----DG----TRFHRQASKCDSHGTHLAGVVSGRD---------------AGVAKGASMRSLR 251 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------cccCC----CC----CcccCCCCCCCCcHHHhhhHhhcCC---------------CccCCCCEEEEEE
Confidence 00000 00 0001246789999999999999862 5999999999999
Q ss_pred eecCCCCCCccCCCCCCHHHHHHHHHHHHhC------CceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCC
Q 004047 265 ACWATPKASKAAGNTCFEADMLAAIDDAIRD------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNS 338 (777)
Q Consensus 265 v~~~~~~g~~~~~~~~~~~~i~~ai~~a~~~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~ 338 (777)
++++. | .++.+++++||+|++++ +++|||||||+ . ....+..++.++.++|++||+||||+
T Consensus 252 Vl~~~--G------~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg-~----~s~~l~~Ai~~A~~~GVlvVaAAGN~ 318 (692)
T 2p4e_P 252 VLNCQ--G------KGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAG-G----YSRVLNAACQRLARAGVVLVTAAGNF 318 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecCC--C------CCCHHHHHHHHHHHHhhhhcccCCceEEEecCCC-C----CcHHHHHHHHHHHHCCCEEEEECCCC
Confidence 99876 4 46788999999999986 89999999998 2 23455666788899999999999999
Q ss_pred CCCCCCC-cCCCcceeeeccCccccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCC
Q 004047 339 GPAPSSL-SNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLT 417 (777)
Q Consensus 339 G~~~~~~-~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~ 417 (777)
|.+.... +...|++|+|||++.+...
T Consensus 319 G~~~~~~sPA~~~~vItVGA~d~~~~~----------------------------------------------------- 345 (692)
T 2p4e_P 319 RDDACLYSPASAPEVITVGATNAQDQP----------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCccCcccCCCEEEEEEEcCCCCc-----------------------------------------------------
Confidence 9765333 4456999999987532100
Q ss_pred CCcccceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEE
Q 004047 418 PEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIK 497 (777)
Q Consensus 418 ~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~ 497 (777)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eceEEeecCCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHH
Q 004047 498 QARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAA 577 (777)
Q Consensus 498 ~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~a 577 (777)
...-+.||+||| ||||+|||++|+++++... +.|..++|||||||||||++
T Consensus 346 ----------a~~ss~fSn~G~--------~vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~a 396 (692)
T 2p4e_P 346 ----------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIA 396 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------cccccccCCCCC--------ceeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHH
Confidence 001123899998 4599999999999997632 57899999999999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHhcccccC
Q 004047 578 ALLKAIHPDWSSAAIRSALMTTAWMKN 604 (777)
Q Consensus 578 ALl~q~~P~~s~~~ik~~L~~TA~~~~ 604 (777)
|||+|++|+|+|++||++|++||.+..
T Consensus 397 ALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 397 AMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp ---------------------------
T ss_pred HHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 999999999999999999999998653
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=7.6e-54 Score=494.96 Aligned_cols=386 Identities=22% Similarity=0.215 Sum_probs=269.7
Q ss_pred CCcEEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhccceEEEeeeeEeEEEEEcCH----HHHHHhh--cCCCeE
Q 004047 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTP----DEAARLS--ELEEVV 95 (777)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~----~~~~~L~--~~~~V~ 95 (777)
...+|||.||+.. ...++++.. ..++++++.. +++++++++. +.+++|+ ++|+|+
T Consensus 30 ~~~~~IV~~k~~~-----------~~~~~~~~~-------g~~v~~~~~~-i~~~~~~~~~~~~~~~~~~l~~~~~~~V~ 90 (671)
T 1r6v_A 30 TEGKILVGYNDRS-----------EVDKIVKAV-------NGKVVLELPQ-IKVVSIKLNGMTVKQAYDKIKALALKGIR 90 (671)
T ss_dssp CTTEEEEEESSHH-----------HHHHHHHHH-------TCEEEEEEGG-GTEEEEECSSCCHHHHHHHHTTSCCSSEE
T ss_pred CCccEEEEECCCc-----------CHHHHHHhc-------CCeEEEEcCC-CcEEEEEeCCcCHHHHHHHHHhccCCCce
Confidence 4689999999643 112223222 1356777765 8999999865 3356676 489999
Q ss_pred EEEeCCCCccccccCC----cccc-----cccc--------hhhhcccCccc-ccccc-ccccCCCCceEEEEeecCCCC
Q 004047 96 SVYPSHPEKYSLQTTR----SWEF-----VGLD--------EVAKQNWNHFN-MGQDL-LSKARYGQDVIVGLVDNGVWP 156 (777)
Q Consensus 96 ~V~~~~~~~~~~~~~~----s~~~-----~gl~--------~~~~~~~~~~~-~~~~~-~~~g~~G~GV~VgVIDtGid~ 156 (777)
+|||+. .+++.... .... ..+. ......|.+.. ....+ |.. ++|+||+|||||||||+
T Consensus 91 ~vepd~--~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~ 167 (671)
T 1r6v_A 91 YVEPSY--KRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDG 167 (671)
T ss_dssp EEECCB--CCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBT
T ss_pred EEecCe--EEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCC
Confidence 999998 65443100 0000 0000 00001111111 11255 887 99999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCCCCCCCCCCCCCccchhhccccCC
Q 004047 157 ESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRR 236 (777)
Q Consensus 157 ~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiaG~~ 236 (777)
+||+|.++- +. +...+.+... ....+..|..||||||||||||..
T Consensus 168 ~HpdL~~~~-------~~-------------------g~~~~~~~~~---------p~~~d~~d~~gHGThVAGiIAa~~ 212 (671)
T 1r6v_A 168 THPDLEGQV-------IA-------------------GYRPAFDEEL---------PAGTDSSYGGSAGTHVAGTIAAKK 212 (671)
T ss_dssp TSGGGTTTB-------CC-------------------EEEGGGTEEE---------CTTCBCCTTCSHHHHHHHHHHCCC
T ss_pred CCccccccE-------Ee-------------------cccccCCCcC---------CCCCCCccCCCcchhhhhhhhccC
Confidence 999997531 11 1111111100 001234567899999999999973
Q ss_pred CCCCCccCCcCCCceeeecCCCeEEEEEeecC----CCCCCccCCCCCCHHHHHHHHHHHHhCCceEEEeecCCCCCCCC
Q 004047 237 VPNASAFGGFAEGTASGGAPLARLAIYKACWA----TPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAF 312 (777)
Q Consensus 237 ~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~----~~~g~~~~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~ 312 (777)
++ ..+.||||+|+|+.+|+++. ...+ ....+.+++||+||+++|++|||||||+..
T Consensus 213 -ng---------~gv~GVAP~A~I~~vkv~~~~~~~~g~g------~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---- 272 (671)
T 1r6v_A 213 -DG---------KGIVGVAPGAKIMPIVIFDDPALVGGNG------YVGDDYVAAGIIWATDHGAKVMNHSWGGWG---- 272 (671)
T ss_dssp -SS---------SSCCCSCTTSEEEEEESBCCHHHHCTTS------BCCHHHHHHHHHHHHHTTCSEEEECEEBSC----
T ss_pred -CC---------CceEEECCCCEEEEEEeccCccccCCCC------ccCHHHHHHHHHHHHHcCCCEEEeCCCCCC----
Confidence 11 12579999999999999976 1113 356678999999999999999999999832
Q ss_pred CccHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCcCCCcceeeeccCccccccccceEeCCCcEEEeeeeccCCCCccee
Q 004047 313 NRDGIAIGALNAVKHNILVACSAGNSGPAP-SSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHP 391 (777)
Q Consensus 313 ~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~-~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 391 (777)
....+..++.+|.++|++||+||||+|... ...+...|++|+|||++.+..
T Consensus 273 ~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~---------------------------- 324 (671)
T 1r6v_A 273 YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG---------------------------- 324 (671)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT----------------------------
T ss_pred CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC----------------------------
Confidence 345778888999999999999999999764 334445689999998643110
Q ss_pred eEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccE
Q 004047 392 LVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPA 471 (777)
Q Consensus 392 ~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~ 471 (777)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCc-
Q 004047 472 TAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSK- 550 (777)
Q Consensus 472 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~- 550 (777)
...+++|||+||.. ||+|||++|+++++.......
T Consensus 325 ------------------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~ 360 (671)
T 1r6v_A 325 ------------------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYE 360 (671)
T ss_dssp ------------------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCC
T ss_pred ------------------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccc
Confidence 01478999999975 999999999999886321110
Q ss_pred ----ccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCceeee
Q 004047 551 ----LAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSG 626 (777)
Q Consensus 551 ----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G 626 (777)
.......+.|..++|||||||||||++|||+|++|+++|.+||++|++||+++...| .+..||||
T Consensus 361 ~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g-----------~d~~~G~G 429 (671)
T 1r6v_A 361 GHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG-----------WDHDTGYG 429 (671)
T ss_dssp CCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS-----------CBTTTBTC
T ss_pred cccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC-----------CCCCcccc
Confidence 001112357999999999999999999999999999999999999999999875432 35679999
Q ss_pred ccCccccCCCCceeeCchhhH
Q 004047 627 HFRPTKAADPGLVYDASYEDY 647 (777)
Q Consensus 627 ~vn~~~Al~~~lv~~~~~~~~ 647 (777)
+||+.+|++..+..+....+|
T Consensus 430 ~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 430 LVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp BCCHHHHHHCCCCSSSEEEEE
T ss_pred eeCHHHHhhhhcCCCCCccce
Confidence 999999999877665544443
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=7.6e-52 Score=436.96 Aligned_cols=258 Identities=26% Similarity=0.334 Sum_probs=211.3
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+..|+||+|||||||||++||+|.++ ++..++|.+.
T Consensus 22 ~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------------~~~~~~~~~~------------ 62 (280)
T 1dbi_A 22 YAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------------VIKGYDFVDN------------ 62 (280)
T ss_dssp HHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------------EEEEEETTTT------------
T ss_pred HHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------------cccceeccCC------------
Confidence 8999988888999999999999999999642 3444555432
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
...+.|..||||||||||+|...+. ..+.||||+|+|+.+|+++.. | .+..+++++||+||+
T Consensus 63 -~~~~~d~~gHGT~vAgiia~~~~~~---------~g~~GvAp~a~l~~~kv~~~~--g------~~~~~~i~~ai~~a~ 124 (280)
T 1dbi_A 63 -DYDPMDLNNHGTHVAGIAAAETNNA---------TGIAGMAPNTRILAVRALDRN--G------SGTLSDIADAIIYAA 124 (280)
T ss_dssp -BSCCCCSSSHHHHHHHHHHCCCSSS---------SSCCCSSSSCEEEEEECCCTT--S------CCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCcHHHHHHHHhCcCCCC---------CcceEeCCCCEEEEEEEECCC--C------CcCHHHHHHHHHHHH
Confidence 1245788999999999999974221 235699999999999999876 4 468899999999999
Q ss_pred hCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcceeeeccCccccccccceEeCCC
Q 004047 294 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTG 373 (777)
Q Consensus 294 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~ 373 (777)
++|++|||||||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 125 ~~g~~Vin~S~G~~~----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 187 (280)
T 1dbi_A 125 DSGAEVINLSLGCDC----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ------------- 187 (280)
T ss_dssp HTTCSEEEECCSSCC----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-------------
T ss_pred HCCCCEEEeCCCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-------------
Confidence 999999999999832 346677888899999999999999999765555666789999998542
Q ss_pred cEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEe
Q 004047 374 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 453 (777)
Q Consensus 374 ~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~ 453 (777)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceee
Q 004047 454 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 533 (777)
Q Consensus 454 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~A 533 (777)
.+.++.||++||.. ||+|
T Consensus 188 ------------------------------------------------------~~~~~~~S~~G~~~--------dv~A 205 (280)
T 1dbi_A 188 ------------------------------------------------------YDRLASFSNYGTWV--------DVVA 205 (280)
T ss_dssp ------------------------------------------------------TSCBCTTBCCSTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCCCCCCCCc--------eEEE
Confidence 24778999999854 9999
Q ss_pred CCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCcccCC
Q 004047 534 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNA 613 (777)
Q Consensus 534 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 613 (777)
||++|+++++. +.|..++|||||||||||++|||++ |.+++.+||++|++||+++..
T Consensus 206 pG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------- 262 (280)
T 1dbi_A 206 PGVDIVSTITG-------------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------- 262 (280)
T ss_dssp ECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT--------
T ss_pred ecCCeEeecCC-------------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC--------
Confidence 99999999976 6899999999999999999999987 899999999999999998753
Q ss_pred CCCCCCCCceeeeccCccccCC
Q 004047 614 DGSIATPFSFGSGHFRPTKAAD 635 (777)
Q Consensus 614 ~~~~~~~~~~G~G~vn~~~Al~ 635 (777)
....||+|+||+.+|++
T Consensus 263 -----~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 -----TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----BTTTBSSEECCHHHHHT
T ss_pred -----CCCcccCCEECHHHHhc
Confidence 23569999999999986
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=3.3e-52 Score=438.60 Aligned_cols=256 Identities=28% Similarity=0.432 Sum_probs=214.2
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|+ +...++|..+
T Consensus 15 ~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~------------ 53 (274)
T 1r0r_E 15 KVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAG------------ 53 (274)
T ss_dssp HHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTT------------
T ss_pred HHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCC------------
Confidence 78999999999999999999999999994 1223333322
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
.....|..||||||||||+|... ...+.||||+|+|+.+|+++.. + .+..+++++||+|++
T Consensus 54 -~~~~~d~~gHGT~vAgiia~~~~----------~~g~~GvAp~a~l~~~~v~~~~--g------~~~~~~i~~ai~~a~ 114 (274)
T 1r0r_E 54 -EAYNTDGNGHGTHVAGTVAALDN----------TTGVLGVAPSVSLYAVKVLNSS--G------SGSYSGIVSGIEWAT 114 (274)
T ss_dssp -CCTTCCSSSHHHHHHHHHHCCSS----------SSBCCCSSTTSEEEEEECSCTT--S------EECHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCHHHHHHHHHccCC----------CCceEEECCCCEEEEEEEECCC--C------CccHHHHHHHHHHHH
Confidence 11356789999999999998621 1124799999999999999876 4 467889999999999
Q ss_pred hCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCC----CCCcCCCcceeeeccCccccccccceE
Q 004047 294 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP----SSLSNLAPWLITVGAGSLDRDFVGPVV 369 (777)
Q Consensus 294 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~----~~~~~~ap~vitVgAs~~~~~~~~~~~ 369 (777)
+++++|||||||... ....+..+++++.++|++||+||||+|... ...+...+++|+||+++.
T Consensus 115 ~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--------- 181 (274)
T 1r0r_E 115 TNGMDVINMSLGGAS----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS--------- 181 (274)
T ss_dssp HTTCSEEEECEEBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT---------
T ss_pred HcCCCEEEeCCCCCC----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC---------
Confidence 999999999999832 246677888899999999999999999753 223344588999997542
Q ss_pred eCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceE
Q 004047 370 LGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVG 449 (777)
Q Consensus 370 ~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g 449 (777)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCC
Q 004047 450 LILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKP 529 (777)
Q Consensus 450 vi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KP 529 (777)
.+.++.||++||. |
T Consensus 182 ----------------------------------------------------------~~~~~~~S~~G~~--------~ 195 (274)
T 1r0r_E 182 ----------------------------------------------------------NSNRASFSSVGAE--------L 195 (274)
T ss_dssp ----------------------------------------------------------TSCBCTTCCCSTT--------E
T ss_pred ----------------------------------------------------------CCCcCccCCCCCC--------c
Confidence 2467899999985 4
Q ss_pred ceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCc
Q 004047 530 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALP 609 (777)
Q Consensus 530 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~ 609 (777)
||+|||.+|+++++. +.|..++|||||||||||++|||+|++|.+++++||++|++||+++.
T Consensus 196 di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----- 257 (274)
T 1r0r_E 196 EVMAPGAGVYSTYPT-------------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG----- 257 (274)
T ss_dssp EEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS-----
T ss_pred eEEeCCCCeEeecCC-------------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC-----
Confidence 999999999999986 78999999999999999999999999999999999999999999763
Q ss_pred ccCCCCCCCCCCceeeeccCccccCC
Q 004047 610 ITNADGSIATPFSFGSGHFRPTKAAD 635 (777)
Q Consensus 610 ~~~~~~~~~~~~~~G~G~vn~~~Al~ 635 (777)
++..||+|+||+.+|++
T Consensus 258 ---------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 ---------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp ---------CHHHHTTCBCCHHHHTC
T ss_pred ---------CCCCcccCccCHHHHhC
Confidence 35689999999999985
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=5.9e-52 Score=434.92 Aligned_cols=255 Identities=30% Similarity=0.438 Sum_probs=216.1
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 15 ~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~------------ 52 (269)
T 1gci_A 15 AAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPG------------ 52 (269)
T ss_dssp HHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTT------------
T ss_pred HHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCC------------
Confidence 799999999999999999999 8999994 1223334322
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
...+.|..||||||||||+|.. + ...+.||||+|+|+.+|+++.. + .+..+++++||+|++
T Consensus 53 -~~~~~d~~gHGT~vAgiia~~~-~---------~~~~~GvAp~a~l~~~~v~~~~--g------~~~~~~~~~ai~~a~ 113 (269)
T 1gci_A 53 -EPSTQDGNGHGTHVAGTIAALN-N---------SIGVLGVAPSAELYAVKVLGAS--G------SGSVSSIAQGLEWAG 113 (269)
T ss_dssp -CCSCSCSSSHHHHHHHHHHCCC-S---------SSBCCCSSTTCEEEEEECBCTT--S------CBCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCChHHHHHHHhcCc-C---------CCCcEEeCCCCEEEEEEeECCC--C------CcCHHHHHHHHHHHH
Confidence 1235688999999999999862 1 1124799999999999999876 4 468899999999999
Q ss_pred hCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcceeeeccCccccccccceEeCCC
Q 004047 294 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTG 373 (777)
Q Consensus 294 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~ 373 (777)
+++++|||||||... ....+..+++++.++|++||+||||+|......+...+++|+|||++.
T Consensus 114 ~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 176 (269)
T 1gci_A 114 NNGMHVANLSLGSPS----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------- 176 (269)
T ss_dssp HTTCSEEEECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------
T ss_pred HCCCeEEEeCCCCCC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-------------
Confidence 999999999999832 235677888899999999999999999776666666789999998542
Q ss_pred cEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEe
Q 004047 374 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 453 (777)
Q Consensus 374 ~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~ 453 (777)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceee
Q 004047 454 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 533 (777)
Q Consensus 454 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~A 533 (777)
.+.++.||++||.. ||+|
T Consensus 177 ------------------------------------------------------~~~~~~~S~~G~~~--------di~A 194 (269)
T 1gci_A 177 ------------------------------------------------------NNNRASFSQYGAGL--------DIVA 194 (269)
T ss_dssp ------------------------------------------------------TSCBCTTCCCSTTE--------EEEE
T ss_pred ------------------------------------------------------CCCCCCCCCCCCCc--------ceEe
Confidence 24678999999965 9999
Q ss_pred CCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCcccCC
Q 004047 534 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNA 613 (777)
Q Consensus 534 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 613 (777)
||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||+++.
T Consensus 195 PG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------- 252 (269)
T 1gci_A 195 PGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------- 252 (269)
T ss_dssp ECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------
T ss_pred cCCCeEeecCC-------------CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------
Confidence 99999999986 68999999999999999999999999999999999999999999763
Q ss_pred CCCCCCCCceeeeccCccccCC
Q 004047 614 DGSIATPFSFGSGHFRPTKAAD 635 (777)
Q Consensus 614 ~~~~~~~~~~G~G~vn~~~Al~ 635 (777)
+++.||+|+||+.+|++
T Consensus 253 -----~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 -----STNLYGSGLVNAEAATR 269 (269)
T ss_dssp -----CHHHHTTCBCCHHHHTC
T ss_pred -----CCCCcccCccCHHHHcC
Confidence 35689999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=1.1e-51 Score=436.00 Aligned_cols=258 Identities=30% Similarity=0.432 Sum_probs=214.7
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|+. ...++|..+
T Consensus 15 ~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~------------ 53 (281)
T 1to2_E 15 ALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPS------------ 53 (281)
T ss_dssp HHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTT------------
T ss_pred HHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCC------------
Confidence 789999999999999999999999999941 222333221
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
+.....|..||||||||||+|... ...+.||||+|+|+.+|+++.. + .+..++++++|+|++
T Consensus 54 ~~~~~~d~~gHGT~vAgiia~~~~----------~~g~~GvAp~a~l~~~kv~~~~--g------~~~~~~i~~ai~~a~ 115 (281)
T 1to2_E 54 ETNPFQDNNSHGTHVAGTVAALNN----------SIGVLGVAPSASLYAVKVLGAD--G------SGQYSWIINGIEWAI 115 (281)
T ss_dssp CCCTTCCSSSHHHHHHHHHHCCSS----------SSSBCCSSTTSEEEEEECSCTT--S------EECHHHHHHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHHHhccCC----------CCcceeeCCCCEEEEEEEeCCC--C------CccHHHHHHHHHHHH
Confidence 111236789999999999998621 1124799999999999999876 4 467899999999999
Q ss_pred hCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCC----CCCcCCCcceeeeccCccccccccceE
Q 004047 294 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP----SSLSNLAPWLITVGAGSLDRDFVGPVV 369 (777)
Q Consensus 294 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~----~~~~~~ap~vitVgAs~~~~~~~~~~~ 369 (777)
+++++|||||||... ....+..+++++.++|++||+||||+|... ...+...|++|+|||++.
T Consensus 116 ~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--------- 182 (281)
T 1to2_E 116 ANNMDVINMSLGGPS----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS--------- 182 (281)
T ss_dssp HTTCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT---------
T ss_pred HCCCcEEEECCcCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC---------
Confidence 999999999999832 246778888899999999999999999763 223344588999997532
Q ss_pred eCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceE
Q 004047 370 LGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVG 449 (777)
Q Consensus 370 ~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g 449 (777)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCC
Q 004047 450 LILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKP 529 (777)
Q Consensus 450 vi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KP 529 (777)
.+.++.||++||..
T Consensus 183 ----------------------------------------------------------~~~~~~fS~~G~~~-------- 196 (281)
T 1to2_E 183 ----------------------------------------------------------SNQRASFSSVGPEL-------- 196 (281)
T ss_dssp ----------------------------------------------------------TSCBCTTCCCSTTC--------
T ss_pred ----------------------------------------------------------CCCcCCcCCCCCCc--------
Confidence 24778999999954
Q ss_pred ceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCc
Q 004047 530 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALP 609 (777)
Q Consensus 530 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~ 609 (777)
||+|||.+|+++++. +.|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 197 di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----- 258 (281)
T 1to2_E 197 DVMAPGVSIQSTLPG-------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG----- 258 (281)
T ss_dssp CEEEECSSEEEEETT-------------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS-----
T ss_pred eEEecCCCeEeecCC-------------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC-----
Confidence 999999999999986 68999999999999999999999999999999999999999999763
Q ss_pred ccCCCCCCCCCCceeeeccCccccCCC
Q 004047 610 ITNADGSIATPFSFGSGHFRPTKAADP 636 (777)
Q Consensus 610 ~~~~~~~~~~~~~~G~G~vn~~~Al~~ 636 (777)
+++.||+|+||+.+|++.
T Consensus 259 ---------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 ---------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp ---------CHHHHTTCBCCHHHHTSS
T ss_pred ---------CCCCcccceecHHHHhhh
Confidence 457899999999999985
No 14
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=3.8e-53 Score=462.45 Aligned_cols=307 Identities=19% Similarity=0.210 Sum_probs=198.1
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCcccccccccee----eeeeecc-cccccccCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKI----IGARYYL-KGFEQLYGP 208 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki----ig~~~~~-~~~~~~~~~ 208 (777)
++|..+..|++|+|||||||||++||+|++..+.+....|...++....... ..+..+ ...+.+. .....
T Consensus 22 ~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---- 96 (357)
T 4h6x_A 22 DLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDY-AAFQSIRDQGLKGKEKEEALEAV---- 96 (357)
T ss_dssp HHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHH-HHHHHHHHHTCCSHHHHHHHHHH----
T ss_pred HHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccc-cccccccCccccccccccccccc----
Confidence 7899999999999999999999999999987666666667654432211000 000000 0000000 00000
Q ss_pred CCCCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHH
Q 004047 209 LNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAA 288 (777)
Q Consensus 209 ~~~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~a 288 (777)
..+..++.|.+||||||||||+|+.. +.+.||||+|+|+.+|++...... .+..+...++++|
T Consensus 97 ---~~~~~~~~D~~gHGThVAGiiag~~~-----------~g~~GvAp~a~l~~~k~~~~~~~~---~~~~~~~~~~~~a 159 (357)
T 4h6x_A 97 ---IPDTKDRIVLNDHACHVTSTIVGQEH-----------SPVFGIAPNCRVINMPQDAVIRGN---YDDVMSPLNLARA 159 (357)
T ss_dssp ---CTTTHHHHHHHHHHHHHHHHHHCCTT-----------SSCCCSCTTSEEEEEECTTC-------------CHHHHHH
T ss_pred ---cCCCCCCcCCCCcHHHHHHHHhccCC-----------CCceEeeccceEEeeeecccCCCC---ccccccHHHHHHH
Confidence 01122455778999999999998731 135799999999999997543100 0113456678999
Q ss_pred HHHHHhCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcceeeeccCccccccccce
Q 004047 289 IDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPV 368 (777)
Q Consensus 289 i~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~ 368 (777)
|+||++.|++|||||||.........+.+..++.++.++|++||+||||+|.....++...|++|+|||++.
T Consensus 160 i~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~-------- 231 (357)
T 4h6x_A 160 IDLALELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV-------- 231 (357)
T ss_dssp HHHHHHTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT--------
T ss_pred HHHHHHcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc--------
Confidence 999999999999999998544455667888888999999999999999999776666666799999998542
Q ss_pred EeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCce
Q 004047 369 VLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGV 448 (777)
Q Consensus 369 ~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~ 448 (777)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcC
Q 004047 449 GLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILK 528 (777)
Q Consensus 449 gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~K 528 (777)
.+.++.|||||+. ..|
T Consensus 232 -----------------------------------------------------------~~~~~~fSn~G~~-----~~~ 247 (357)
T 4h6x_A 232 -----------------------------------------------------------DGTPCHFSNWGGN-----NTK 247 (357)
T ss_dssp -----------------------------------------------------------TSSBCTTCC---C-----TTT
T ss_pred -----------------------------------------------------------CCcccccccCCCC-----CCc
Confidence 3478899999974 458
Q ss_pred CceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHH----CCCCCHHHHHHHHHhcccccC
Q 004047 529 PDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI----HPDWSSAAIRSALMTTAWMKN 604 (777)
Q Consensus 529 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~~s~~~ik~~L~~TA~~~~ 604 (777)
|||+|||++|+++++.. +.|..++|||||||||||++|||+++ +|.|++++||++|++||++++
T Consensus 248 ~di~APG~~i~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~ 315 (357)
T 4h6x_A 248 EGILAPGEEILGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCD 315 (357)
T ss_dssp TEEEEECSSEEECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-----
T ss_pred cceeecCCCeEeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCC
Confidence 99999999999998762 45778999999999999999999965 568999999999999999875
Q ss_pred CCCCcccCCCCCCCCCCceeeeccCccccCC
Q 004047 605 NKALPITNADGSIATPFSFGSGHFRPTKAAD 635 (777)
Q Consensus 605 ~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 635 (777)
.. ....+.+||+|+||+.+|++
T Consensus 316 ~~---------~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 316 PE---------VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp ------------------CTTCBCCHHHHHH
T ss_pred CC---------CCCCcccceeEEecHHHHHH
Confidence 42 22345679999999999997
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=4.7e-51 Score=430.89 Aligned_cols=257 Identities=26% Similarity=0.372 Sum_probs=216.3
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|... +|+||+|||||||||++||+|.+ +++..++|.++
T Consensus 22 ~aw~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~------------ 61 (279)
T 1thm_A 22 QAWDIA-EGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVDN------------ 61 (279)
T ss_dssp HHHTTC-CCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTTT------------
T ss_pred HHHhcC-CCCCCEEEEEccCCCCCCcchhc---------------------------CccccccccCC------------
Confidence 788875 79999999999999999999974 24444555432
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
...+.|..||||||||||+|...++ ..+.||||+|+|+.+|+++.. | .+..+++++||+||+
T Consensus 62 -~~~~~d~~gHGT~vAgiia~~~~n~---------~g~~GvAp~a~l~~~~v~~~~--g------~~~~~~~~~ai~~a~ 123 (279)
T 1thm_A 62 -DSTPQNGNGHGTHCAGIAAAVTNNS---------TGIAGTAPKASILAVRVLDNS--G------SGTWTAVANGITYAA 123 (279)
T ss_dssp -BSCCCCSSSHHHHHHHHHHCCCSSS---------SSCCCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCcHHHHHHHHhCccCCC---------CccEEeCCCCEEEEEEeeCCC--C------CccHHHHHHHHHHHH
Confidence 1245788999999999999974222 225699999999999999876 4 468889999999999
Q ss_pred hCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcceeeeccCccccccccceEeCCC
Q 004047 294 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTG 373 (777)
Q Consensus 294 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~ 373 (777)
++|++|||||||... ..+.+..+++++.++|+++|+||||+|.....++...+++|+|||++.
T Consensus 124 ~~g~~Vin~S~G~~~----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 186 (279)
T 1thm_A 124 DQGAKVISLSLGGTV----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------- 186 (279)
T ss_dssp HTTCSEEEECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-------------
T ss_pred HCCCCEEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-------------
Confidence 999999999999832 245677888899999999999999999776666666789999998542
Q ss_pred cEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEe
Q 004047 374 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 453 (777)
Q Consensus 374 ~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~ 453 (777)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceee
Q 004047 454 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 533 (777)
Q Consensus 454 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~A 533 (777)
.+.++.||++||.. ||+|
T Consensus 187 ------------------------------------------------------~~~~~~fS~~G~~~--------dv~A 204 (279)
T 1thm_A 187 ------------------------------------------------------NDNKSSFSTYGSWV--------DVAA 204 (279)
T ss_dssp ------------------------------------------------------TSCBCTTCCCCTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCcCCCCCce--------EEEE
Confidence 24678999999864 9999
Q ss_pred CCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCcccCC
Q 004047 534 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNA 613 (777)
Q Consensus 534 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 613 (777)
||++|+++++. +.|..++|||||||||||++||| ++|.+++++||++|++||+++...
T Consensus 205 PG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~------- 262 (279)
T 1thm_A 205 PGSSIYSTYPT-------------STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT------- 262 (279)
T ss_dssp ECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-------
T ss_pred cCCCeEEEeCC-------------CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-------
Confidence 99999999987 68999999999999999999999 589999999999999999987643
Q ss_pred CCCCCCCCceeeeccCccccCC
Q 004047 614 DGSIATPFSFGSGHFRPTKAAD 635 (777)
Q Consensus 614 ~~~~~~~~~~G~G~vn~~~Al~ 635 (777)
...||+|+||+.+|++
T Consensus 263 ------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 ------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ------TTTBSSEECCHHHHHH
T ss_pred ------CccccCCeeCHHHHhc
Confidence 2468999999999975
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2.3e-51 Score=442.74 Aligned_cols=264 Identities=27% Similarity=0.385 Sum_probs=214.2
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|.+ ++++.++|..++..
T Consensus 32 ~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~~--------- 75 (327)
T 2x8j_A 32 AVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTDYGG--------- 75 (327)
T ss_dssp HHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSGGGG---------
T ss_pred HHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCCCCC---------
Confidence 899999999999999999999999999963 24455555544221
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
+.....|..||||||||||+|.. ++ ..+.||||+|+|+.+|+++.. | .+..+++++||+||+
T Consensus 76 ~~~~~~d~~gHGT~VAgiia~~~-~~---------~g~~GvAp~a~l~~~kv~~~~--g------~~~~~~i~~ai~~a~ 137 (327)
T 2x8j_A 76 DETNFSDNNGHGTHVAGTVAAAE-TG---------SGVVGVAPKADLFIIKALSGD--G------SGEMGWIAKAIRYAV 137 (327)
T ss_dssp CTTCCCCSSSHHHHHHHHHHCCC-CS---------SBCCCSSTTCEEEEEECSCTT--S------EECHHHHHHHHHHHH
T ss_pred CCCCCCCCCCchHHHHHHHhccC-CC---------CCcEeeCCCCEEEEEEeECCC--C------CcCHHHHHHHHHHHH
Confidence 11235688999999999999972 11 125799999999999999876 4 467899999999999
Q ss_pred h------CCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCC-----CCCcCCCcceeeeccCcccc
Q 004047 294 R------DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-----SSLSNLAPWLITVGAGSLDR 362 (777)
Q Consensus 294 ~------~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~-----~~~~~~ap~vitVgAs~~~~ 362 (777)
+ .+++|||||||... ....+..++.++.++|++||+||||+|... ...+...+++|+|||++.
T Consensus 138 ~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~-- 211 (327)
T 2x8j_A 138 DWRGPKGEQMRIITMSLGGPT----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF-- 211 (327)
T ss_dssp HCCCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT--
T ss_pred hhcccccCCceEEEECCCcCC----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC--
Confidence 9 89999999999832 245677788899999999999999999652 223344589999998542
Q ss_pred ccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHH
Q 004047 363 DFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEV 442 (777)
Q Consensus 363 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~ 442 (777)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCC
Q 004047 443 KRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNAL 522 (777)
Q Consensus 443 ~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~ 522 (777)
.+.++.||++||.
T Consensus 212 -----------------------------------------------------------------~~~~~~fS~~G~~-- 224 (327)
T 2x8j_A 212 -----------------------------------------------------------------DLRLSDFTNTNEE-- 224 (327)
T ss_dssp -----------------------------------------------------------------TCCBSCC---CCC--
T ss_pred -----------------------------------------------------------------CCCCCCccCCCCC--
Confidence 2478899999985
Q ss_pred CCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHH-----CCCCCHHHHHHHHH
Q 004047 523 DPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI-----HPDWSSAAIRSALM 597 (777)
Q Consensus 523 ~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~P~~s~~~ik~~L~ 597 (777)
|||+|||++|+++++. +.|..++|||||||||||++|||+|+ +|.+++.+||++|+
T Consensus 225 ------~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~ 285 (327)
T 2x8j_A 225 ------IDIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLV 285 (327)
T ss_dssp ------CSEEEECSSEEEECST-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ------ceEecCcCceEeecCC-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHH
Confidence 4999999999999876 68999999999999999999999999 99999999999999
Q ss_pred hcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCC
Q 004047 598 TTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 636 (777)
Q Consensus 598 ~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 636 (777)
+||+++.. ++..||+|+||+.+|++.
T Consensus 286 ~tA~~~g~-------------~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 286 RRATPIGF-------------TAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp TTEECCSS-------------CHHHHTTCEECTTHHHHH
T ss_pred HhCccCCC-------------CCCceeeeEECHHHHHHh
Confidence 99997642 567899999999999883
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.3e-51 Score=436.63 Aligned_cols=267 Identities=24% Similarity=0.269 Sum_probs=211.6
Q ss_pred cCCC-CceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCCCCCC
Q 004047 139 ARYG-QDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRS 217 (777)
Q Consensus 139 g~~G-~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~ 217 (777)
.++| +||+|||||||||++||+|.+.. +..+.+... .....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~---------------------------~~~~~~~~~-----------~~~~~ 44 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD---------------------------LTVLPTLAP-----------TAARS 44 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE---------------------------EEECCCSSC-----------CCCCT
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe---------------------------eecCcCCCC-----------CCCCC
Confidence 4678 79999999999999999997531 111111111 01112
Q ss_pred CCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHhCCc
Q 004047 218 PRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGV 297 (777)
Q Consensus 218 ~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~~gv 297 (777)
..|..||||||||||+|+.. ..+.||||+|+|+.+|++.+... ......+++||+||++.++
T Consensus 45 d~~~~gHGT~VAGiiag~~~-----------~~~~GvAp~a~l~~~kv~~~~~~-------~~~~~~i~~ai~~a~~~~~ 106 (282)
T 3zxy_A 45 DGFMSAHGTHVASIIFGQPE-----------TSVPGIAPQCRGLIVPIFSDDRR-------RITQLDLARGIERAVNAGA 106 (282)
T ss_dssp TCHHHHHHHHHHHHHHCCTT-----------SSSCCSSTTSEEEEEECSCSSSS-------CCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCcccceeehhhccCC-----------ceeeeeccccceEeeEeeccccc-------cchHHHHHHHHHHhhccCC
Confidence 33457999999999998731 13479999999999999876532 3678889999999999999
Q ss_pred eEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcceeeeccCccccccccceEeCCCcEEE
Q 004047 298 HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEII 377 (777)
Q Consensus 298 dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~ 377 (777)
+|||||||...........+..++..+.++|+++|+||||+|......+...+++|+|||++.
T Consensus 107 ~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~----------------- 169 (282)
T 3zxy_A 107 HIINISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD----------------- 169 (282)
T ss_dssp SEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT-----------------
T ss_pred eEEeccCccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC-----------------
Confidence 999999997433344556677888899999999999999999776666666799999998542
Q ss_pred eeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEecCCC
Q 004047 378 GKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPA 457 (777)
Q Consensus 378 g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~ 457 (777)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceeeCCCc
Q 004047 458 NGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLN 537 (777)
Q Consensus 458 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~ 537 (777)
.+.++.||+||+. ..||||+|||.+
T Consensus 170 --------------------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~ 194 (282)
T 3zxy_A 170 --------------------------------------------------HGHPLDFSNWGST-----YEQQGILAPGED 194 (282)
T ss_dssp --------------------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSS
T ss_pred --------------------------------------------------CCccccccCCCCC-----ccccceeccCcc
Confidence 2477899999874 468899999999
Q ss_pred EEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHC----CCCCHHHHHHHHHhcccccCCCCCcccCC
Q 004047 538 ILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIH----PDWSSAAIRSALMTTAWMKNNKALPITNA 613 (777)
Q Consensus 538 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 613 (777)
|+++++. +.|..++|||||||||||++|||+|++ |.++|++||++|++||++++..
T Consensus 195 i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~------- 254 (282)
T 3zxy_A 195 ILGAKPG-------------GGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD------- 254 (282)
T ss_dssp EEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------
T ss_pred eeeecCC-------------CceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC-------
Confidence 9999987 789999999999999999999999975 7899999999999999987542
Q ss_pred CCCCCCCCceeeeccCccccCC
Q 004047 614 DGSIATPFSFGSGHFRPTKAAD 635 (777)
Q Consensus 614 ~~~~~~~~~~G~G~vn~~~Al~ 635 (777)
.+.....+|+|+||+.+|++
T Consensus 255 --~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 255 --APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp ------CGGGTTCBCCHHHHHH
T ss_pred --CCCccCceeeeEeCHHHHHH
Confidence 23356689999999999986
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3.4e-50 Score=431.89 Aligned_cols=280 Identities=27% Similarity=0.349 Sum_probs=221.6
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|.+. +...++|..... .
T Consensus 17 ~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~~---------~ 60 (310)
T 2ixt_A 17 DTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGATT---------P 60 (310)
T ss_dssp TTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSSS---------C
T ss_pred hhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCCC---------C
Confidence 8999999999999999999999999999742 333444443210 0
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
......|..||||||||||+|... .....+.||||+|+|+.+|++.+. | .+..+++++||+|++
T Consensus 61 ~~~~~~d~~gHGT~vAgiia~~~~--------~n~~g~~GvAp~a~l~~~~v~~~~--g------~~~~~~~~~ai~~a~ 124 (310)
T 2ixt_A 61 INNSCTDRNGHGTHVAGTALADGG--------SDQAGIYGVAPDADLWAYKVLLDS--G------SGYSDDIAAAIRHAA 124 (310)
T ss_dssp EETCCCCSSSHHHHHHHHHHCBCC--------TTSCSCBCSCTTSEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHhccCC--------CCCCceEEECCCCEEEEEEEEcCC--C------CCcHHHHHHHHHHHH
Confidence 112356889999999999998741 222335799999999999999876 4 468899999999999
Q ss_pred hCCc-----eEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCC--cCCCcceeeeccCcccccccc
Q 004047 294 RDGV-----HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL--SNLAPWLITVGAGSLDRDFVG 366 (777)
Q Consensus 294 ~~gv-----dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~--~~~ap~vitVgAs~~~~~~~~ 366 (777)
++++ +|||||||... ....+..++.++.++|++||+||||+|....+. +...+++|+|||++...
T Consensus 125 ~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~---- 196 (310)
T 2ixt_A 125 DQATATGTKTIISMSLGSSA----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ---- 196 (310)
T ss_dssp HHHHHHTCCEEEEECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE----
T ss_pred HhhhccCCCeEEEEcCCCCC----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc----
Confidence 9988 99999999832 246677788899999999999999999764333 34458999999854210
Q ss_pred ceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcC
Q 004047 367 PVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAG 446 (777)
Q Consensus 367 ~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~G 446 (777)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCC--ccccccCCCCCCCC-
Q 004047 447 GVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAP--FMANFTSRGPNALD- 523 (777)
Q Consensus 447 a~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~Gp~~~~- 523 (777)
..+ .++.||++||....
T Consensus 197 ------------------------------------------------------------~~g~~~~~~~S~~G~~~~~g 216 (310)
T 2ixt_A 197 ------------------------------------------------------------QNGTYRVADYSSRGYISTAG 216 (310)
T ss_dssp ------------------------------------------------------------ETTEEEECTTSCCCCTTTTT
T ss_pred ------------------------------------------------------------cCCCeeeccccCCCCccCCc
Confidence 012 67899999995421
Q ss_pred ---CCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcc
Q 004047 524 ---PYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTA 600 (777)
Q Consensus 524 ---d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA 600 (777)
..+.||||+|||++|+++++. +.|..++|||||||||||++|||+|++|.|++.+||++|++||
T Consensus 217 ~~~~~~~~~di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA 283 (310)
T 2ixt_A 217 DYVIQEGDIEISAPGSSVYSTWYN-------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERA 283 (310)
T ss_dssp SSSCCTTCCCEEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHH
T ss_pred cccccCCCeeEECCCCCEeeecCC-------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Confidence 123599999999999999876 6899999999999999999999999999999999999999999
Q ss_pred cccCCCCCcccCCCCCCCCCCceeeeccCc
Q 004047 601 WMKNNKALPITNADGSIATPFSFGSGHFRP 630 (777)
Q Consensus 601 ~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~ 630 (777)
++.+..+. .......+..+|+|++|+
T Consensus 284 ~~~~~~~~----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 284 KSVDIKGG----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp HTSCCCBS----TTCCSSSBTTTBTCBCCC
T ss_pred cccCCCCC----cccccCCccccccceeec
Confidence 98764321 112345678899999996
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=9.8e-51 Score=435.56 Aligned_cols=272 Identities=24% Similarity=0.273 Sum_probs=218.2
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
++|+....++||+|||||||||++||+|.++ .+.+..++..+
T Consensus 12 ~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~------------ 53 (306)
T 4h6w_A 12 KLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSG------------ 53 (306)
T ss_dssp HHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC-----------------
T ss_pred HHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCC------------
Confidence 7999887779999999999999999999753 12222222221
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
+.....|..||||||||||+|+.. +.+.||||+|+|+.+|++.+.. + .+....+++||+||+
T Consensus 54 ~~~~~~d~~gHGThVAGiiag~~~-----------~~~~GVAp~a~l~~~kv~~~~~-~------~~~~~~i~~ai~~a~ 115 (306)
T 4h6w_A 54 EANANGSMSTHGTHVASIIFGQHD-----------SPVTGIAPQCRGLIVPVFADES-L------KLSQLDLSRAIEQAV 115 (306)
T ss_dssp -----CCCCHHHHHHHHHHHCCTT-----------SSSCCSSTTSEEEECCCCCSSS-C------CCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCchHHHHHHHHcccc-----------CCcceeccccccceeecccccc-c------cchHHHHHHHHHHhh
Confidence 112344678999999999998731 2357999999999999987653 2 368888999999999
Q ss_pred hCCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcceeeeccCccccccccceEeCCC
Q 004047 294 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTG 373 (777)
Q Consensus 294 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~ 373 (777)
+++++|||+|||...........+..++..+.++|++||++|||+|......+...+++|+|||++.
T Consensus 116 ~~g~~vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~------------- 182 (306)
T 4h6w_A 116 NNGANIINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD------------- 182 (306)
T ss_dssp HTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-------------
T ss_pred cccceeeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-------------
Confidence 9999999999997443444556788888999999999999999999766555556689999998542
Q ss_pred cEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEe
Q 004047 374 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 453 (777)
Q Consensus 374 ~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~ 453 (777)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCceee
Q 004047 454 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 533 (777)
Q Consensus 454 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~A 533 (777)
.+.+++||++|+. ..||||+|
T Consensus 183 ------------------------------------------------------~~~~~~~s~~g~~-----~~~~di~A 203 (306)
T 4h6w_A 183 ------------------------------------------------------QGKPVDFSNWGDA-----YQKQGILA 203 (306)
T ss_dssp ------------------------------------------------------TSCBCSSSCBCHH-----HHHHEEEE
T ss_pred ------------------------------------------------------CCCccccccccCC-----cCcceeec
Confidence 2467789999973 46899999
Q ss_pred CCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHH----CCCCCHHHHHHHHHhcccccCCCCCc
Q 004047 534 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI----HPDWSSAAIRSALMTTAWMKNNKALP 609 (777)
Q Consensus 534 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~~s~~~ik~~L~~TA~~~~~~g~~ 609 (777)
||++|+++++. +.|..++|||||||||||++|||+++ +|.++|++||++|++||+++...+
T Consensus 204 PG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-- 268 (306)
T 4h6w_A 204 PGKDILGAKPN-------------GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD-- 268 (306)
T ss_dssp ECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT--
T ss_pred CCcCcccccCC-------------CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC--
Confidence 99999999987 78999999999999999999999865 599999999999999999886532
Q ss_pred ccCCCCCCCCCCceeeeccCccccCC
Q 004047 610 ITNADGSIATPFSFGSGHFRPTKAAD 635 (777)
Q Consensus 610 ~~~~~~~~~~~~~~G~G~vn~~~Al~ 635 (777)
......||+|+||+.+|++
T Consensus 269 -------~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 269 -------TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp -------CSCGGGGTTCBCCHHHHHH
T ss_pred -------CCCCCCcceeecCHHHHHH
Confidence 2244579999999999997
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=4e-50 Score=432.51 Aligned_cols=264 Identities=27% Similarity=0.359 Sum_probs=216.5
Q ss_pred ccccccCCCC--ceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCC
Q 004047 134 DLLSKARYGQ--DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNA 211 (777)
Q Consensus 134 ~~~~~g~~G~--GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 211 (777)
.+|..+ +|+ ||+|||||||||++||+|.++ +...++|..+...
T Consensus 19 ~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~------- 63 (320)
T 2z30_A 19 SVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS------- 63 (320)
T ss_dssp GGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB-------
T ss_pred HHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCccccCCccC-------
Confidence 789988 999 999999999999999999742 3333444332100
Q ss_pred CCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHH
Q 004047 212 TEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDD 291 (777)
Q Consensus 212 ~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~ 291 (777)
.+.....|..||||||||||+|.. ++ ..+.||||+|+|+.+|+++.. | .+..+++++||+|
T Consensus 64 -~~~~~~~d~~gHGT~vAgiia~~~-n~---------~g~~GvAp~a~l~~~~v~~~~--g------~~~~~~i~~ai~~ 124 (320)
T 2z30_A 64 -TKLRDCADQNGHGTHVIGTIAALN-ND---------IGVVGVAPGVQIYSVRVLDAR--G------SGSYSDIAIGIEQ 124 (320)
T ss_dssp -CCHHHHBCSSSHHHHHHHHHHCCS-SS---------BSCCCSSTTCEEEEEECSCTT--S------EEEHHHHHHHHHH
T ss_pred -CCCCCCCCCCCCHHHHHHHHHccc-CC---------CceEeeCCCCEEEEEEeeCCC--C------CccHHHHHHHHHH
Confidence 001123678999999999999862 11 124699999999999999876 4 4678999999999
Q ss_pred HHhC--------------------CceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCCcCCCcc
Q 004047 292 AIRD--------------------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPW 351 (777)
Q Consensus 292 a~~~--------------------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~~~~ap~ 351 (777)
|++. +++|||||||... ....+..++.++.++|++||+||||+|.....++...|+
T Consensus 125 a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~ 200 (320)
T 2z30_A 125 AILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPE 200 (320)
T ss_dssp HHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTT
T ss_pred HHhCcccccccccccccccccccCCceEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCC
Confidence 9987 9999999999832 245677778889999999999999999876666666799
Q ss_pred eeeeccCccccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecC
Q 004047 352 LITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRG 431 (777)
Q Consensus 352 vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g 431 (777)
+|+|||++.
T Consensus 201 vi~Vga~~~----------------------------------------------------------------------- 209 (320)
T 2z30_A 201 VIAVGAIDS----------------------------------------------------------------------- 209 (320)
T ss_dssp EEEEEEECT-----------------------------------------------------------------------
T ss_pred eEEEEeeCC-----------------------------------------------------------------------
Confidence 999998542
Q ss_pred CcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCcc
Q 004047 432 SGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFM 511 (777)
Q Consensus 432 ~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 511 (777)
.+.+
T Consensus 210 ----------------------------------------------------------------------------~~~~ 213 (320)
T 2z30_A 210 ----------------------------------------------------------------------------NDNI 213 (320)
T ss_dssp ----------------------------------------------------------------------------TSCB
T ss_pred ----------------------------------------------------------------------------CCCc
Confidence 2477
Q ss_pred ccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHC-------
Q 004047 512 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIH------- 584 (777)
Q Consensus 512 a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~------- 584 (777)
+.||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+|++
T Consensus 214 ~~~S~~g~----------~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~ 270 (320)
T 2z30_A 214 ASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKI 270 (320)
T ss_dssp CTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CcccCCCC----------CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccc
Confidence 89999997 789999999999987 689999999999999999999999999
Q ss_pred ------CCCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCC
Q 004047 585 ------PDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 636 (777)
Q Consensus 585 ------P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 636 (777)
|.+++.+||++|++||+++... ..+..||+|+||+.+|++.
T Consensus 271 ~~~~~~p~lt~~~v~~~L~~ta~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 271 LPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CCCCCTTCCSTTSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHhhCccCCCC-----------CCCCCcCCceeCHHHHHHH
Confidence 9999999999999999987532 2456799999999999874
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.2e-49 Score=434.17 Aligned_cols=269 Identities=20% Similarity=0.126 Sum_probs=214.4
Q ss_pred ccccccCCCC--ceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCC
Q 004047 134 DLLSKARYGQ--DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNA 211 (777)
Q Consensus 134 ~~~~~g~~G~--GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 211 (777)
.+|.. ++|+ ||+||||||||| +||+|.++ ++..++|..+..
T Consensus 34 ~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~~~-------- 76 (347)
T 2iy9_A 34 ETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQDGS-------- 76 (347)
T ss_dssp HHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTTCC--------
T ss_pred HHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCCCC--------
Confidence 78987 8999 999999999999 99999642 333444443200
Q ss_pred CCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHH
Q 004047 212 TEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDD 291 (777)
Q Consensus 212 ~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~ 291 (777)
......+.|..||||||||||+|+. | +.||||+|+|+.+|++++. + .. ++++||+|
T Consensus 77 ~~~~~~~~d~~gHGT~vAgiia~~~--------g-----~~GvAp~a~l~~~~v~~~~--~-------~~--~~~~ai~~ 132 (347)
T 2iy9_A 77 PFPVKKSEALYIHGTAMASLIASRY--------G-----IYGVYPHALISSRRVIPDG--V-------QD--SWIRAIES 132 (347)
T ss_dssp SSCCSSSHHHHHHHHHHHHHHHCSS--------S-----SCCSSTTCEEEEEECCSSB--C-------TT--HHHHHHHH
T ss_pred CCCCCCCCCCCCcHHHHHHHHhccc--------C-----CcccCCCCEEEEEEEecCC--C-------HH--HHHHHHHH
Confidence 0011245678899999999999861 2 3699999999999999765 2 22 99999999
Q ss_pred HHhC------CceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCC-------CCCcCCCc--------
Q 004047 292 AIRD------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-------SSLSNLAP-------- 350 (777)
Q Consensus 292 a~~~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~-------~~~~~~ap-------- 350 (777)
|+++ |++|||||||... .....+.+..++..+.++|++||+||||+|... ..++...+
T Consensus 133 a~~~~~~~~~~~~Vin~S~G~~~-~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~ 211 (347)
T 2iy9_A 133 IMSNVFLAPGEEKIINISGGQKG-VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKK 211 (347)
T ss_dssp HHTCTTSCTTEEEEEEESSCBCC-C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHH
T ss_pred HHhhhhcccCCceEEEeccccCC-CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccc
Confidence 9999 9999999999732 234567788888999999999999999999753 23334457
Q ss_pred --ceeeeccCcc--ccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEE
Q 004047 351 --WLITVGAGSL--DRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIV 426 (777)
Q Consensus 351 --~vitVgAs~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~iv 426 (777)
++|+|||++. +....
T Consensus 212 ~~~vi~Vga~~~~~~g~~~------------------------------------------------------------- 230 (347)
T 2iy9_A 212 QDPVIRVAALAQYRKGETP------------------------------------------------------------- 230 (347)
T ss_dssp TCCEEEEEEECCCCTTSCC-------------------------------------------------------------
T ss_pred cCCEEEEEEcccCCCCcee-------------------------------------------------------------
Confidence 8999998653 11000
Q ss_pred EEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecC
Q 004047 427 LCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQ 506 (777)
Q Consensus 427 l~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~ 506 (777)
.
T Consensus 231 -------------------------------------------------------------------------------~ 231 (347)
T 2iy9_A 231 -------------------------------------------------------------------------------V 231 (347)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCC
Q 004047 507 PAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPD 586 (777)
Q Consensus 507 ~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ 586 (777)
..+.++.||++||+ ||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+
T Consensus 232 ~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~ 291 (347)
T 2iy9_A 232 LHGGGITGSRFGNN-------WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPR 291 (347)
T ss_dssp BCCCSSSCBCBCTT-------TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCC
Confidence 01355799999995 67999999999999986 78999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCC
Q 004047 587 WSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 636 (777)
Q Consensus 587 ~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 636 (777)
+++.+||++|++||++.... .+..+|+|+||+.+|++.
T Consensus 292 lt~~~v~~~L~~tA~~~~~~------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 292 ATATELKRTLLESADKYPSL------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp SCHHHHHHHHHHHSEECGGG------------TTTSGGGEECCHHHHHHH
T ss_pred CCHHHHHHHHHHhCccCCCC------------CCccccCCEecHHHHHHH
Confidence 99999999999999987643 235899999999999984
No 22
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=6e-49 Score=441.26 Aligned_cols=293 Identities=27% Similarity=0.301 Sum_probs=222.8
Q ss_pred cccc-ccCCCCceEEEEeecCCCC------CCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeeccccccccc
Q 004047 134 DLLS-KARYGQDVIVGLVDNGVWP------ESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLY 206 (777)
Q Consensus 134 ~~~~-~g~~G~GV~VgVIDtGid~------~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~ 206 (777)
.+|. .+++|+||+|||||||||+ .||+|.++ ++..++|.+.
T Consensus 12 ~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~---------------------------i~~~~~~~~~----- 59 (434)
T 1wmd_A 12 VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK---------------------------ITALYALGRT----- 59 (434)
T ss_dssp HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC---------------------------EEEEEETTTT-----
T ss_pred hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC---------------------------EeeeccccCC-----
Confidence 7887 7999999999999999999 79998632 3333444321
Q ss_pred CCCCCCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHH
Q 004047 207 GPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADML 286 (777)
Q Consensus 207 ~~~~~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~ 286 (777)
..+.|..||||||||||+|+. . .+.||||+|+|+.+|+++..... ....+++.
T Consensus 60 ---------~~~~d~~gHGT~VAgiiag~g---------~---~~~GvAp~a~l~~~~v~~~~g~~------~~~~~~~~ 112 (434)
T 1wmd_A 60 ---------NNANDTNGHGTHVAGSVLGNG---------S---TNKGMAPQANLVFQSIMDSGGGL------GGLPSNLQ 112 (434)
T ss_dssp ---------TCCCCSSSHHHHHHHHHHCCS---------S---SSCCSSTTSEEEEEECCCTTSSC------TTSCSSHH
T ss_pred ---------CCCCCCCCcHHHHHHHHHcCC---------C---CceeeCCCCEEEEEEeecCCCcc------ccccHHHH
Confidence 246788999999999999862 1 14699999999999999765211 12456799
Q ss_pred HHHHHHHhCCceEEEeecCCCCCCCCCccHHHHHHHHH-HhCCcEEEEecCCCCCCCCCCc--CCCcceeeeccCccccc
Q 004047 287 AAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNA-VKHNILVACSAGNSGPAPSSLS--NLAPWLITVGAGSLDRD 363 (777)
Q Consensus 287 ~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~aAGN~G~~~~~~~--~~ap~vitVgAs~~~~~ 363 (777)
++|+++++.|++|||||||...... .+....+++++ .++|++||+||||+|....++. ..++++|+|||++..+.
T Consensus 113 ~ai~~a~~~g~~Vin~S~G~~~~~~--~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~ 190 (434)
T 1wmd_A 113 TLFSQAYSAGARIHTNSWGAAVNGA--YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRP 190 (434)
T ss_dssp HHHHHHHHTTCSEEEECCCBCCTTC--CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCG
T ss_pred HHHHHHHhcCCeEEEecCCCCcCCc--CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCc
Confidence 9999999999999999999843111 23455555655 6899999999999997654444 34689999999764321
Q ss_pred cccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHh
Q 004047 364 FVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVK 443 (777)
Q Consensus 364 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~ 443 (777)
..
T Consensus 191 ~~------------------------------------------------------------------------------ 192 (434)
T 1wmd_A 191 SF------------------------------------------------------------------------------ 192 (434)
T ss_dssp GG------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred hcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCC
Q 004047 444 RAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALD 523 (777)
Q Consensus 444 ~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~ 523 (777)
|. .....+.+++||||||+.
T Consensus 193 --~~--------------------------------------------------------~~~~~~~~a~fS~~G~~~-- 212 (434)
T 1wmd_A 193 --GS--------------------------------------------------------YADNINHVAQFSSRGPTK-- 212 (434)
T ss_dssp --CG--------------------------------------------------------GGSCTTSBCTTSCCCCCT--
T ss_pred --Cc--------------------------------------------------------ccCCCCccccccCCCCCC--
Confidence 00 001145899999999997
Q ss_pred CCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCC-----CHHHHHHHHHh
Q 004047 524 PYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDW-----SSAAIRSALMT 598 (777)
Q Consensus 524 d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~-----s~~~ik~~L~~ 598 (777)
++++||||+|||++|+++++........ .....+.|..++|||||||||||++|||+|++|++ ++++||++|++
T Consensus 213 ~g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~ 291 (434)
T 1wmd_A 213 DGRIKPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIA 291 (434)
T ss_dssp TSCCCCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred CCCCCceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHc
Confidence 6999999999999999998653210000 00113689999999999999999999999999865 89999999999
Q ss_pred cccccCCCCCcccCCCCCCCCCCceeeeccCccccCCCC
Q 004047 599 TAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPG 637 (777)
Q Consensus 599 TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 637 (777)
||+++.. ..+++.||||++|+.+|++..
T Consensus 292 tA~~~~~-----------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 292 GAADIGL-----------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp HCBCCSS-----------CSSCTTTTTCBCCHHHHHTCE
T ss_pred CCcccCC-----------CCCCccCCcCeEeHHHhcccc
Confidence 9987532 236788999999999999754
No 23
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.2e-48 Score=469.08 Aligned_cols=355 Identities=22% Similarity=0.191 Sum_probs=243.8
Q ss_pred CCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHh----
Q 004047 219 RDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR---- 294 (777)
Q Consensus 219 ~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~---- 294 (777)
.|++||||||||||||.. + ...+.||||+|+|+.+|+++..... ....+.++.+|.+|++
T Consensus 267 ~D~~GHGThVAGIIAa~~-N---------~~g~~GVAP~AkI~~vKVld~~~g~------~~t~s~l~~AI~~Aid~a~~ 330 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-S---------SRDVDGVAPNAKIVSMTIGDGRLGS------METGTALVRAMTKVMELCRD 330 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-S---------SSSSCCSCTTCEEEEEECBCTTTSS------CBCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHhcCC-C---------CCCceeecCCCEEEEEEeccCCCCc------ccChHHHHHHHHHHHHHHhh
Confidence 478999999999999984 2 2234699999999999998765211 2366778888888887
Q ss_pred -CCceEEEeecCCCCCCCCCccHHHHHHHHHH-hCCcEEEEecCCCCCCCCCCcCC----CcceeeeccCccccccccce
Q 004047 295 -DGVHVLSISIGTNQPFAFNRDGIAIGALNAV-KHNILVACSAGNSGPAPSSLSNL----APWLITVGAGSLDRDFVGPV 368 (777)
Q Consensus 295 -~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~aAGN~G~~~~~~~~~----ap~vitVgAs~~~~~~~~~~ 368 (777)
.|++|||||||... .....+.+..++.++. ++|++||+||||+|+...++..+ .+++|+|||++.........
T Consensus 331 ~~gadVINmS~G~~~-~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~y 409 (1354)
T 3lxu_X 331 GRRIDVINMSYGEHA-NWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEY 409 (1354)
T ss_dssp TCCCCEEEECCCCCC-SCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC--
T ss_pred cCCceEEEcCCccCC-CCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccc
Confidence 79999999999943 2233456777777775 89999999999999875554332 59999999976433111000
Q ss_pred EeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCce
Q 004047 369 VLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGV 448 (777)
Q Consensus 369 ~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~ 448 (777)
..
T Consensus 410 s~------------------------------------------------------------------------------ 411 (1354)
T 3lxu_X 410 AM------------------------------------------------------------------------------ 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcC
Q 004047 449 GLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILK 528 (777)
Q Consensus 449 gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~K 528 (777)
.....+.++.||||||+. ++++|
T Consensus 412 -------------------------------------------------------~~~~~g~~asFSS~GPt~--dg~~K 434 (1354)
T 3lxu_X 412 -------------------------------------------------------REKLPGNVYTWTSRDPCI--DGGQG 434 (1354)
T ss_dssp -------------------------------------------------------------CCCCCCCCSCCS--SSSCC
T ss_pred -------------------------------------------------------ccCCCCccccccCCCCCc--cCCCc
Confidence 001135889999999997 69999
Q ss_pred CceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHH----HCCCCCHHHHHHHHHhcccccC
Q 004047 529 PDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKA----IHPDWSSAAIRSALMTTAWMKN 604 (777)
Q Consensus 529 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~~s~~~ik~~L~~TA~~~~ 604 (777)
|||+|||++|+++..... +.|..++|||||||||||++|||++ .+|.+++.+||++|++||++.+
T Consensus 435 pDIaAPG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~ 503 (1354)
T 3lxu_X 435 VTVCAPGGAIASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLG 503 (1354)
T ss_dssp EEEEEEC--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCT
T ss_pred ceEEecCceEEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCC
Confidence 999999999999865421 6799999999999999999999987 7999999999999999999875
Q ss_pred CCCCcccCCCCCCCCCCceeeeccCccccCCCCceeeCchhhHHHhhhcCCCCCCCCcccCCCCCCCCCCCCCCeeEeec
Q 004047 605 NKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFTNPVFRCPNKPPSALNLNYPSIAIPN 684 (777)
Q Consensus 605 ~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~ 684 (777)
. .+++.||+|+||+.+|++..+.|+..+.+++.|+|..+.++.. .|.+.+
T Consensus 504 ~------------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~r------------------gIylR~ 553 (1354)
T 3lxu_X 504 Y------------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADK------------------GIHLRQ 553 (1354)
T ss_dssp T------------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBS------------------SEEECS
T ss_pred C------------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCC------------------ceEEec
Confidence 4 2567899999999999999999999999999999988754320 111111
Q ss_pred --CCceEEEEEEEE----ecCC--C--Ce--eEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEECcccccccCCC
Q 004047 685 --LNGTVIVKRTVT----NVGG--S--KS--VYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTK 752 (777)
Q Consensus 685 --~~~~~t~~~tvt----n~~~--~--~~--ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 752 (777)
.....+++++|+ |... . .. .-++.+.... --|. -|..+.+ .++.++|.|.|++. .. ..
T Consensus 554 ~~~~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~-----~L-~~ 623 (1354)
T 3lxu_X 554 GVQRNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPT-----GL-QP 623 (1354)
T ss_dssp SCCCSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGG-----GC-CS
T ss_pred cccCCceEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCC-----CC-CC
Confidence 112334444432 2111 1 11 1222222211 1233 3777776 36678899998883 33 44
Q ss_pred ceEEEEEEEEC-----CccEEEeeEEEEe
Q 004047 753 QYVFGWYRWTD-----GLHLVRSPMAVSF 776 (777)
Q Consensus 753 ~~~~G~~~~~~-----~~~~v~~P~~~~~ 776 (777)
+.+++.|...| -++..|+|+.|..
T Consensus 624 G~h~~~v~~~D~~~~~~gp~f~ipvTv~~ 652 (1354)
T 3lxu_X 624 GVHSAVIRAYDTDCVQKGSLFEIPVTVVQ 652 (1354)
T ss_dssp EEEEEEEEEEESSCTTSCCSEEEEEEEEE
T ss_pred cceeEEEEEEEcCCcccCceEEeeEEEEe
Confidence 56689998775 2699999998853
No 24
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=6.1e-49 Score=427.82 Aligned_cols=297 Identities=22% Similarity=0.280 Sum_probs=217.3
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccce---eeeeeecccccccccCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKK---IIGARYYLKGFEQLYGPLN 210 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~k---iig~~~~~~~~~~~~~~~~ 210 (777)
.+|+.+++|+||+||||||||+ +||+|.++-. .+.............+.+ ......+.+.+... +
T Consensus 23 ~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~--- 90 (340)
T 3lpc_A 23 KVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVL-------PGYDFISNSQISLDGDGRDADPFDEGDWFDNWACG-G--- 90 (340)
T ss_dssp HHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBC-------CCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTS-C---
T ss_pred HHHHhcCCCCCeEEEEEcCCCC-CChhhhcccc-------cCccccCCccccccCCCccCCcccccccccccccc-C---
Confidence 8999999999999999999998 9999975311 111110000000000000 00000000000000 0
Q ss_pred CCCCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHH
Q 004047 211 ATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAID 290 (777)
Q Consensus 211 ~~~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~ 290 (777)
.+.+.....|..||||||||||+|...+. ..+.||||+|+|+.+|++... + +..+++++||+
T Consensus 91 ~~~~~~~~~d~~gHGT~vAgiia~~~~~~---------~g~~GvAp~a~l~~~~v~~~~--~-------~~~~~~~~ai~ 152 (340)
T 3lpc_A 91 RPDPRKERSDSSWHGSHVAGTIAAVTNNR---------IGVAGVAYGAKVVPVRALGRC--G-------GYDSDISDGLY 152 (340)
T ss_dssp TTCGGGSCBCCCCHHHHHHHHHHCCCSSS---------SSCCCTTTTSEEEEEECCBTT--B-------CCHHHHHHHHH
T ss_pred CCCcccCCCCCCCCHHHHHHHHHccCCCC---------CcceeecCCCEEEEEEEecCC--C-------CcHHHHHHHHH
Confidence 00112245788999999999999974322 224699999999999999876 4 68899999999
Q ss_pred HHHh----------CCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CCcCCCcceeeeccCc
Q 004047 291 DAIR----------DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGS 359 (777)
Q Consensus 291 ~a~~----------~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~-~~~~~ap~vitVgAs~ 359 (777)
|+++ .+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||++
T Consensus 153 ~a~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~ 229 (340)
T 3lpc_A 153 WAAGGRIAGIPENRNPAKVINMSLGSDG---QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATT 229 (340)
T ss_dssp HHHTCCCTTSCCCSSCCSEEEECCCEES---CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEEC
T ss_pred HHhcccccccccccCCCeEEEeCcCCCC---CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCC
Confidence 9998 89999999999832 23455677788899999999999999996543 2344568999999854
Q ss_pred cccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhh
Q 004047 360 LDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKG 439 (777)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~ 439 (777)
.
T Consensus 230 ~------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 230 S------------------------------------------------------------------------------- 230 (340)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred HHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCC
Q 004047 440 MEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGP 519 (777)
Q Consensus 440 ~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp 519 (777)
.+.++.||++||
T Consensus 231 --------------------------------------------------------------------~~~~~~~S~~g~ 242 (340)
T 3lpc_A 231 --------------------------------------------------------------------RGIRASFSNYGV 242 (340)
T ss_dssp --------------------------------------------------------------------TSSBCTTCCBST
T ss_pred --------------------------------------------------------------------CCCcCCCCCCCC
Confidence 247889999998
Q ss_pred CCCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHH-C---CCCCHHHHHHH
Q 004047 520 NALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI-H---PDWSSAAIRSA 595 (777)
Q Consensus 520 ~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---P~~s~~~ik~~ 595 (777)
||||+|||.+|+++++..... .....|..++|||||||||||++|||+|+ + |.+++++||++
T Consensus 243 --------~~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~ 308 (340)
T 3lpc_A 243 --------DVDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDV 308 (340)
T ss_dssp --------TCCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred --------CceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHH
Confidence 459999999999998763311 11246999999999999999999999998 5 99999999999
Q ss_pred HHhcccccCCCCCcccCCCCCCCCCCceeeeccCccccCCC
Q 004047 596 LMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 636 (777)
Q Consensus 596 L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 636 (777)
|++||+++.. .++..||+|+||+.+||+.
T Consensus 309 L~~tA~~~~~------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 309 LVSTTSPFNG------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HHHTCBCCSS------------CCSSCCCSSBCCHHHHHHH
T ss_pred HHhcCCcCCC------------CCCCCcccceecHHHHHHH
Confidence 9999998753 2456899999999999874
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1e-47 Score=405.76 Aligned_cols=236 Identities=24% Similarity=0.346 Sum_probs=200.4
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|.++ ++..++|.+.
T Consensus 20 ~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~------------ 60 (284)
T 1sh7_A 20 RNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVDN------------ 60 (284)
T ss_dssp SBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTTT------------
T ss_pred hhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccCC------------
Confidence 7899999999999999999999999999742 3334445432
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
...+.|..||||||||||+|+. .||||+|+|+.+|++++. | .+..+++++||+|++
T Consensus 61 -~~~~~d~~gHGT~vAgiia~~~---------------~GvAp~a~l~~~kv~~~~--g------~~~~~~~~~ai~~a~ 116 (284)
T 1sh7_A 61 -DADSSDCNGHGTHVAGTIGGSQ---------------YGVAKNVNIVGVRVLSCS--G------SGTTSGVISGVDWVA 116 (284)
T ss_dssp -BSCCCCSSSHHHHHHHHHHCTT---------------TCSSTTCEEEEEECBCTT--S------CBCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCcHHHHHHHHhccc---------------CCcCCCCEEEEEEeeCCC--C------CcCHHHHHHHHHHHH
Confidence 1246688999999999999862 499999999999999876 4 468899999999999
Q ss_pred h--CCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CCcCCCcceeeeccCccccccccceEe
Q 004047 294 R--DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVGPVVL 370 (777)
Q Consensus 294 ~--~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~-~~~~~ap~vitVgAs~~~~~~~~~~~~ 370 (777)
+ .+++|||||||.. ....+..++.++.++|++||+||||+|.... ..+...|++|+|||++.
T Consensus 117 ~~~~~~~Vin~S~G~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (284)
T 1sh7_A 117 QNASGPSVANMSLGGG-----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS---------- 181 (284)
T ss_dssp HHCCSSEEEEECCCBS-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT----------
T ss_pred hCCCCCcEEEeCCCCC-----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC----------
Confidence 7 4799999999983 3467788888999999999999999996532 23445689999998542
Q ss_pred CCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEE
Q 004047 371 GTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGL 450 (777)
Q Consensus 371 ~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gv 450 (777)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCc
Q 004047 451 ILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPD 530 (777)
Q Consensus 451 i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPD 530 (777)
.+.++.||++||.. |
T Consensus 182 ---------------------------------------------------------~~~~~~~S~~G~~~--------d 196 (284)
T 1sh7_A 182 ---------------------------------------------------------SDSRSSFSNWGSCV--------D 196 (284)
T ss_dssp ---------------------------------------------------------TSBBCTTCCBSTTC--------C
T ss_pred ---------------------------------------------------------CCCcCcccCCCCcc--------E
Confidence 24778999999965 9
Q ss_pred eeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCC
Q 004047 531 ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 605 (777)
Q Consensus 531 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~ 605 (777)
|+|||++|+++++. +.|..++|||||||||||++|||+|++|++++++||++|++||++...
T Consensus 197 i~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 197 LFAPGSQIKSAWYD-------------GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp EEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred EEeccCCeEEecCC-------------CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCc
Confidence 99999999999876 689999999999999999999999999999999999999999997653
No 26
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=3.7e-47 Score=401.06 Aligned_cols=236 Identities=25% Similarity=0.347 Sum_probs=200.3
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|.++ +...++|..
T Consensus 22 ~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------- 61 (276)
T 4dzt_A 22 NSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALG------------- 61 (276)
T ss_dssp SCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTS-------------
T ss_pred cceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCC-------------
Confidence 7899999999999999999999999999642 233333332
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
....|..||||||||||+|.. .||||+|+|+.+|++++. + ....+.++++|+|++
T Consensus 62 --~~~~d~~gHGT~vAgiiag~~---------------~GvAp~a~l~~~~v~~~~--~------~~~~~~~~~ai~~~~ 116 (276)
T 4dzt_A 62 --GNGQDCNGHGTHVAGTIGGVT---------------YGVAKAVNLYAVRVLDCN--G------SGSTSGVIAGVDWVT 116 (276)
T ss_dssp --SCSCCSSSHHHHHHHHHHCTT---------------TCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHccc---------------cCCCCCCEEEEEEEeCCC--C------CcCHHHHHHHHHHHH
Confidence 145678999999999999862 499999999999999876 4 478899999999999
Q ss_pred hC--CceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCC-cCCCcceeeeccCccccccccceEe
Q 004047 294 RD--GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL-SNLAPWLITVGAGSLDRDFVGPVVL 370 (777)
Q Consensus 294 ~~--gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~-~~~ap~vitVgAs~~~~~~~~~~~~ 370 (777)
+. +++|||||||.. ....+..++.++.++|+++|+||||+|...... +...+++|+|||++.
T Consensus 117 ~~~~~~~vin~S~g~~-----~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (276)
T 4dzt_A 117 RNHRRPAVANMSLGGG-----VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS---------- 181 (276)
T ss_dssp HHCCSSEEEEECCCEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred hcCCCCeEEEECCCCC-----CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC----------
Confidence 86 999999999982 246778888999999999999999999654332 345688999998542
Q ss_pred CCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEE
Q 004047 371 GTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGL 450 (777)
Q Consensus 371 ~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gv 450 (777)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCc
Q 004047 451 ILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPD 530 (777)
Q Consensus 451 i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPD 530 (777)
.+.++.||++||.. |
T Consensus 182 ---------------------------------------------------------~~~~~~~S~~g~~~--------d 196 (276)
T 4dzt_A 182 ---------------------------------------------------------SDARASFSNYGSCV--------D 196 (276)
T ss_dssp ---------------------------------------------------------TSBBCTTCCBSTTC--------C
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCCc--------e
Confidence 34788999999976 9
Q ss_pred eeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCC
Q 004047 531 ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 605 (777)
Q Consensus 531 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~ 605 (777)
|+|||++|+++++... ..|..++|||||||+|||++|||+|++|++++++||++|++||++...
T Consensus 197 v~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 197 LFAPGASIPSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp EEEECSSEEEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred EEeCCCCeEccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 9999999999987632 579999999999999999999999999999999999999999998754
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=5e-47 Score=399.94 Aligned_cols=237 Identities=26% Similarity=0.341 Sum_probs=198.7
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|.++ +...++|.++
T Consensus 22 ~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~~------------ 62 (278)
T 2b6n_A 22 NNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFIDN------------ 62 (278)
T ss_dssp SEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTTT------------
T ss_pred hhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCCC------------
Confidence 6899999999999999999999999999742 2333444432
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
...+.|..||||||||||+|.. .||||+|+|+.+|++++. + .+..+++++||+|++
T Consensus 63 -~~~~~d~~gHGT~vAgiia~~~---------------~GvAp~a~i~~~~v~~~~--g------~~~~~~~~~ai~~a~ 118 (278)
T 2b6n_A 63 -DYDATDCNGHGTHVAGTIGGST---------------YGVAKNVNVVGVRVLNCS--G------SGSNSGVIAGINWVK 118 (278)
T ss_dssp -BSCCCCSSSHHHHHHHHHHCTT---------------TCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCcHHHHHHHHHCCC---------------cCCCCCCeEEEEEEECCC--C------CccHHHHHHHHHHHH
Confidence 1245688999999999999861 499999999999999876 4 468899999999999
Q ss_pred h--CCceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCC-CcCCCcceeeeccCccccccccceEe
Q 004047 294 R--DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS-LSNLAPWLITVGAGSLDRDFVGPVVL 370 (777)
Q Consensus 294 ~--~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~-~~~~ap~vitVgAs~~~~~~~~~~~~ 370 (777)
+ .+++|||||||... .+.+..++.++.++|++||+||||+|..... .+...+++|+|||++.
T Consensus 119 ~~~~g~~Vin~S~G~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 183 (278)
T 2b6n_A 119 NNASGPAVANMSLGGGA-----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---------- 183 (278)
T ss_dssp HHCCSSEEEEECCCEEC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred hCCCCCeEEEECCCCCc-----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----------
Confidence 7 59999999999822 4667788889999999999999999965432 2345689999998542
Q ss_pred CCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcCceEE
Q 004047 371 GTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGL 450 (777)
Q Consensus 371 ~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gv 450 (777)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCcCCc
Q 004047 451 ILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPD 530 (777)
Q Consensus 451 i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~~KPD 530 (777)
.+.++.||++||.. |
T Consensus 184 ---------------------------------------------------------~~~~~~~S~~G~~~--------d 198 (278)
T 2b6n_A 184 ---------------------------------------------------------NDSRSSFSNYGTCL--------D 198 (278)
T ss_dssp ---------------------------------------------------------TSBBCTTCCBSTTC--------C
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCCC--------e
Confidence 24778999999854 9
Q ss_pred eeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccC
Q 004047 531 ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKN 604 (777)
Q Consensus 531 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~ 604 (777)
|+|||++|+++++... +.|..++|||||||||||++|||+|++|++++++||++|++||++..
T Consensus 199 i~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 199 IYAPGSSITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp EEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred EEeCCCCeECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 9999999999986522 57899999999999999999999999999999999999999998754
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.1e-47 Score=402.20 Aligned_cols=240 Identities=28% Similarity=0.319 Sum_probs=200.8
Q ss_pred cccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCCC
Q 004047 135 LLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATED 214 (777)
Q Consensus 135 ~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 214 (777)
.|. ..+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~~-------------- 61 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYYY-------------- 61 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESSS--------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCCC--------------
Confidence 454 48999999999999999999999742 233334431
Q ss_pred CCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHh
Q 004047 215 DRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR 294 (777)
Q Consensus 215 ~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~ 294 (777)
.+.|..||||||||||+|+ ..||||+|+|+.+|++++. | .+..+++++||+|+++
T Consensus 62 --~~~d~~gHGT~vAgiia~~---------------~~GvAp~a~i~~~~v~~~~--g------~~~~~~~~~ai~~a~~ 116 (279)
T 2pwa_A 62 --SSRDGNGHGTHCAGTVGSR---------------TYGVAKKTQLFGVKVLDDN--G------SGQYSTIIAGMDFVAS 116 (279)
T ss_dssp --CSSCSSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHhc---------------ccccCCCCEEEEEEeEcCC--C------CcCHHHHHHHHHHHHh
Confidence 3567899999999999986 1599999999999999876 4 4788999999999999
Q ss_pred CCc-------eEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCC-CcCCCcceeeeccCcccccccc
Q 004047 295 DGV-------HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS-LSNLAPWLITVGAGSLDRDFVG 366 (777)
Q Consensus 295 ~gv-------dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~-~~~~ap~vitVgAs~~~~~~~~ 366 (777)
+++ +|||||||.. ..+.+..++.++.++|++||+||||+|..... .+...|++|+|||++.
T Consensus 117 ~~~~~~~~~~~Vin~S~G~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------ 185 (279)
T 2pwa_A 117 DKNNRNCPKGVVASLSLGGG-----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR------ 185 (279)
T ss_dssp HGGGSCCTTEEEEEECCCEE-----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------
T ss_pred cCccccCCCccEEEecCCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC------
Confidence 887 9999999982 34678888889999999999999999975432 3345689999998542
Q ss_pred ceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcC
Q 004047 367 PVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAG 446 (777)
Q Consensus 367 ~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~G 446 (777)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCC
Q 004047 447 GVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYI 526 (777)
Q Consensus 447 a~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~~ 526 (777)
.+.++.||++||..
T Consensus 186 -------------------------------------------------------------~~~~~~~S~~G~~~----- 199 (279)
T 2pwa_A 186 -------------------------------------------------------------YDRRSSFSNYGSVL----- 199 (279)
T ss_dssp -------------------------------------------------------------TSBBCTTCCBSTTC-----
T ss_pred -------------------------------------------------------------CCCcCCcCCCCCcc-----
Confidence 24788999999964
Q ss_pred cCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCC
Q 004047 527 LKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNK 606 (777)
Q Consensus 527 ~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~ 606 (777)
||+|||++|+++++. +.|..++|||||||||||++|||+|+ |.+++.+||++|++||++...
T Consensus 200 ---di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~- 261 (279)
T 2pwa_A 200 ---DIFGPGTDILSTWIG-------------GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL- 261 (279)
T ss_dssp ---CEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-
T ss_pred ---eEEEecCCeEEeecC-------------CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-
Confidence 999999999999987 68999999999999999999999999 999999999999999997642
Q ss_pred CCcccCCCCCCCCCCceeeeccCc
Q 004047 607 ALPITNADGSIATPFSFGSGHFRP 630 (777)
Q Consensus 607 g~~~~~~~~~~~~~~~~G~G~vn~ 630 (777)
..+|+|.+|+
T Consensus 262 --------------~~~~~g~~n~ 271 (279)
T 2pwa_A 262 --------------SNIPFGTVNL 271 (279)
T ss_dssp --------------BSCCTTSCCE
T ss_pred --------------CCCCCCCccE
Confidence 2367777776
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=6e-46 Score=432.70 Aligned_cols=299 Identities=20% Similarity=0.184 Sum_probs=203.2
Q ss_pred cccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCC
Q 004047 133 QDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNAT 212 (777)
Q Consensus 133 ~~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 212 (777)
..+|..+++|+||+|||||||||++||+|.+.- +.+.++|..+.
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~---------- 103 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCS----------
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCC----------
Confidence 389999999999999999999999999997431 11223333321
Q ss_pred CCCCCCCC-CCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCC-HHHHHHHHH
Q 004047 213 EDDRSPRD-MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCF-EADMLAAID 290 (777)
Q Consensus 213 ~~~~~~~D-~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~-~~~i~~ai~ 290 (777)
+...|.| ..||||||||||||. .++. .+.||||+|+|+.+|+++.. + ... ...+++...
T Consensus 104 -~d~~p~d~~~gHGT~vAGiiaa~-~n~~---------g~~GVAp~A~l~~vkv~~~~--~------~~~~~~~~~~~~~ 164 (600)
T 2oxa_A 104 -DDPTPTDPDTGHGTSVSGIIAAV-DNAI---------GTKGIAPRAQLQGFNLLDDN--S------QQLQKDWLYALGD 164 (600)
T ss_dssp -SCCCCCSTTCCHHHHHHHHHHCC-SSSS---------SCCCSSTTCEEEEECTTSTT--C------CCCHHHHHHHTTT
T ss_pred -CCCCCCCCCCCCccHHHHHhhcc-cCCC---------cceEEccCCceEEEeeecCc--c------cchHHHHHHHHhh
Confidence 1123444 789999999999997 2221 24699999999999999876 3 121 234444444
Q ss_pred HHHhCCceEEEeecCCCCCCCCCcc----HHHHHHHH---HHhCCcEEEEecCCCCCCCC--------------------
Q 004047 291 DAIRDGVHVLSISIGTNQPFAFNRD----GIAIGALN---AVKHNILVACSAGNSGPAPS-------------------- 343 (777)
Q Consensus 291 ~a~~~gvdVIn~SlG~~~~~~~~~~----~~~~a~~~---a~~~Gi~vV~aAGN~G~~~~-------------------- 343 (777)
.+..++++|||||||.........+ .+..++.. +.++|++||+||||+|....
T Consensus 165 ~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~ 244 (600)
T 2oxa_A 165 SNASRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENS 244 (600)
T ss_dssp SHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBT
T ss_pred hhcccCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCcccccccccccc
Confidence 4777899999999998432222222 22222222 45789999999999986311
Q ss_pred --CCcCCCcceeeeccCccccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcc
Q 004047 344 --SLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKV 421 (777)
Q Consensus 344 --~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 421 (777)
...+.++|+|+|||++
T Consensus 245 n~~~~~~s~~vItVgA~~-------------------------------------------------------------- 262 (600)
T 2oxa_A 245 NLDPSNSNFWNLVVSALN-------------------------------------------------------------- 262 (600)
T ss_dssp TSSGGGGSSSEEEEEEEC--------------------------------------------------------------
T ss_pred ccCCcccCceeEEEeccc--------------------------------------------------------------
Confidence 0011234456666532
Q ss_pred cceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceE
Q 004047 422 KGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQART 501 (777)
Q Consensus 422 ~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~ 501 (777)
T Consensus 263 -------------------------------------------------------------------------------- 262 (600)
T 2oxa_A 263 -------------------------------------------------------------------------------- 262 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccC-------CCCCC--------------cccCCcccccc
Q 004047 502 VLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSE-------ASSPS--------------KLAFDKRIVKY 560 (777)
Q Consensus 502 ~~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~-------~~~~~--------------~~~~~~~~~~y 560 (777)
..+.++.||++||+. ||+|||++|.++.+. ..... ....+...+.|
T Consensus 263 -----~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y 329 (600)
T 2oxa_A 263 -----ADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYN 329 (600)
T ss_dssp -----TTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEE
T ss_pred -----CCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccc
Confidence 135789999999987 999999995443321 10000 00001112348
Q ss_pred eeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCccc--------------------CCCCCCCCC
Q 004047 561 TIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPIT--------------------NADGSIATP 620 (777)
Q Consensus 561 ~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~ 620 (777)
..++|||||||||||++|||+|++|+|++++||++|++||++++..+.++. ........+
T Consensus 330 ~~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~ 409 (600)
T 2oxa_A 330 GVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFS 409 (600)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEB
T ss_pred cccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCcccc
Confidence 999999999999999999999999999999999999999999875432211 011122345
Q ss_pred CceeeeccCccccCCCCceee
Q 004047 621 FSFGSGHFRPTKAADPGLVYD 641 (777)
Q Consensus 621 ~~~G~G~vn~~~Al~~~lv~~ 641 (777)
+.||||+||+.+|++.+..+.
T Consensus 410 ~~~G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 410 PTYGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp TTTBTCBCCHHHHHHHHTTCC
T ss_pred ccCCCchhhHHHHHHHHHhcc
Confidence 789999999999998655443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=3.3e-46 Score=422.50 Aligned_cols=291 Identities=14% Similarity=0.082 Sum_probs=214.0
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|.++-. ....++|.+.... + .
T Consensus 29 ~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~~~~------p-~ 76 (471)
T 1p8j_A 29 EAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASFDVNDQDPD------P-Q 76 (471)
T ss_dssp HHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCEETTTTBSC------C-C
T ss_pred HHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcccccCCCCC------C-C
Confidence 899999999999999999999999999974310 0012333332100 0 0
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
+...+.|..||||||||||+|...++. .+.||||+|+|+.+|+++ | ..+++++|+++++
T Consensus 77 ~~~~~~d~~gHGT~vAGiiaa~~~n~~---------g~~GvAp~a~i~~~rv~~----g--------~~~~~~~ai~~a~ 135 (471)
T 1p8j_A 77 PRYTQMNDNRHGTRCAGEVAAVANNGV---------CGVGVAYNARIGGVRMLD----G--------EVTDAVEARSLGL 135 (471)
T ss_dssp CCCCTTCTTCHHHHHHHHHHCCSSSSS---------SCCCTTTTSEEEEEECSS----S--------CCCHHHHHHHHTS
T ss_pred CccCCCCCCCcHHHHHHHHHeeccCCC---------CCEEECCCCeEEEEEccC----C--------chhHHHHHHHhhh
Confidence 112456889999999999999743221 246999999999999985 2 3567999999999
Q ss_pred h-CCceEEEeecCCCCCCC---CCccHHHHHHHHHHh-----CCcEEEEecCCCCCCCCCC----cCCCcceeeeccCcc
Q 004047 294 R-DGVHVLSISIGTNQPFA---FNRDGIAIGALNAVK-----HNILVACSAGNSGPAPSSL----SNLAPWLITVGAGSL 360 (777)
Q Consensus 294 ~-~gvdVIn~SlG~~~~~~---~~~~~~~~a~~~a~~-----~Gi~vV~aAGN~G~~~~~~----~~~ap~vitVgAs~~ 360 (777)
+ ++++|||||||...... .....+..++.++.+ +|++||+||||+|...... ...++++|+|||++.
T Consensus 136 ~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~ 215 (471)
T 1p8j_A 136 NPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ 215 (471)
T ss_dssp CTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT
T ss_pred ccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC
Confidence 9 99999999999843211 122334445555543 6999999999999653221 123478999998542
Q ss_pred ccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhH
Q 004047 361 DRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGM 440 (777)
Q Consensus 361 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~ 440 (777)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCC
Q 004047 441 EVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPN 520 (777)
Q Consensus 441 ~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~ 520 (777)
.+.++.||++||.
T Consensus 216 -------------------------------------------------------------------~g~~a~~S~~g~~ 228 (471)
T 1p8j_A 216 -------------------------------------------------------------------FGNVPWYSEACSS 228 (471)
T ss_dssp -------------------------------------------------------------------TSCCCTTCCBCTT
T ss_pred -------------------------------------------------------------------CCCcccccCCCCc
Confidence 2477899999998
Q ss_pred CCCCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcc
Q 004047 521 ALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTA 600 (777)
Q Consensus 521 ~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA 600 (777)
.. ...+|...+||.+|+++.+.. ..|..++|||||||||||++|||+|++|+|++++||++|++||
T Consensus 229 ~~--~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA 294 (471)
T 1p8j_A 229 TL--ATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTS 294 (471)
T ss_dssp CC--EEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHC
T ss_pred ce--EEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcC
Confidence 63 445666667778999997641 4689999999999999999999999999999999999999999
Q ss_pred cccCCCCCcccCCCCCCCCCCceeeeccCccccCCCCc
Q 004047 601 WMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGL 638 (777)
Q Consensus 601 ~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 638 (777)
++.+...............+..||||+||+.+|++...
T Consensus 295 ~~~~~~~~~~~~n~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 295 KPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp BCTTCCCSCCEECTTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred ccCCCCCCCceecCCCcccCCCCCCEEEcHhHHHHHhh
Confidence 98865322221111112245689999999999998544
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=7.6e-46 Score=414.71 Aligned_cols=275 Identities=21% Similarity=0.198 Sum_probs=199.1
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
..|..+++|+||+|+|||||||++||+|.++- ......+... ..+ ..
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~---~dg----~~ 63 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPE---EDG----TR 63 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCC---CC-------
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccC---CCC----cc
Confidence 57888999999999999999999999997531 0001111100 000 00
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
....+.|..||||||||||+|+. .||||+|+|+.+|++++. | .+..+++++||+|++
T Consensus 64 f~~~~~D~~GHGThVAGIIag~~---------------~GVAP~A~L~~vkVl~~~--G------~g~~s~ii~ai~~a~ 120 (546)
T 2qtw_B 64 FHRQASKCDSHGTHLAGVVSGRD---------------AGVAKGASMRSLRVLNCQ--G------KGTVSGTLIGLEFIR 120 (546)
T ss_dssp ----CTTTTHHHHHHHHHHHCTT---------------TCSSTTCEEEEEECSCTT--S------EEEHHHHHHHHHHHH
T ss_pred ccCCCCCCCChHHHHHHHHhccC---------------CCcCCCCEEEEEEEECCC--C------CcCHHHHHHHHHHHH
Confidence 01245688999999999999872 499999999999999876 4 467899999999999
Q ss_pred hC------CceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCC-CcCCCcceeeeccCcccccccc
Q 004047 294 RD------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS-LSNLAPWLITVGAGSLDRDFVG 366 (777)
Q Consensus 294 ~~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~-~~~~ap~vitVgAs~~~~~~~~ 366 (777)
+. +++|||||||+. ....+..++.++.++|++||+||||+|.+... .+...|++|+|||++.+.
T Consensus 121 ~~~~~~~~g~~VINmSlGg~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g---- 191 (546)
T 2qtw_B 121 KSQLVQPVGPLVVLLPLAGG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQD---- 191 (546)
T ss_dssp HHHHHSCCSCEEEEECEEEE-----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTS----
T ss_pred HhhhhccCCCeEEEecCCCC-----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCC----
Confidence 74 999999999982 34677888899999999999999999965422 234568999999865321
Q ss_pred ceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhcC
Q 004047 367 PVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAG 446 (777)
Q Consensus 367 ~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~G 446 (777)
T Consensus 192 -------------------------------------------------------------------------------- 191 (546)
T 2qtw_B 192 -------------------------------------------------------------------------------- 191 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccc----cccCCCCCCC
Q 004047 447 GVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMA----NFTSRGPNAL 522 (777)
Q Consensus 447 a~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a----~fSS~Gp~~~ 522 (777)
.++ .||++|+.
T Consensus 192 ---------------------------------------------------------------~~a~~s~~fSn~G~~-- 206 (546)
T 2qtw_B 192 ---------------------------------------------------------------QPVTLGTLGTNFGRC-- 206 (546)
T ss_dssp ---------------------------------------------------------------CBCEETTEECCBSTT--
T ss_pred ---------------------------------------------------------------CcccccCCcCCCCCc--
Confidence 122 28999984
Q ss_pred CCCCcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccc
Q 004047 523 DPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWM 602 (777)
Q Consensus 523 ~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~ 602 (777)
|||+|||++|+++++... ..|..++|||||||||||++|||+|++|+++|++||++|++||.+
T Consensus 207 ------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~ 269 (546)
T 2qtw_B 207 ------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAK 269 (546)
T ss_dssp ------CCEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEE
T ss_pred ------ceEEecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccc
Confidence 599999999999987632 578999999999999999999999999999999999999999986
Q ss_pred cCCCCCccc-----CCCC----CCCCCCceeeec--cCccccCC
Q 004047 603 KNNKALPIT-----NADG----SIATPFSFGSGH--FRPTKAAD 635 (777)
Q Consensus 603 ~~~~g~~~~-----~~~~----~~~~~~~~G~G~--vn~~~Al~ 635 (777)
.......+. ...+ .......+|+|+ .++.++..
T Consensus 270 ~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 270 DVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp SCSCGGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred cccCCccCccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 542211000 0001 111345678888 77777765
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=8.4e-46 Score=421.90 Aligned_cols=284 Identities=17% Similarity=0.143 Sum_probs=213.5
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
.+|..+++|+||+|||||||||++||+|.++- + ..+.++|.++. .
T Consensus 45 ~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~~d~~~~~----------~ 89 (503)
T 2id4_A 45 DLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGSWDFNDNT----------N 89 (503)
T ss_dssp HHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGCEETTTTB----------S
T ss_pred HHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCcccCCCCC----------C
Confidence 89999999999999999999999999997531 0 01223343321 0
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
+.....|..||||||||||||...++. .+.||||+|+|+.+|+++.. +...++++||+|++
T Consensus 90 ~~~p~~d~~gHGT~vAGiiaa~~~n~~---------~~~GvAp~a~i~~~rv~~~~----------~~~~~~~~ai~~a~ 150 (503)
T 2id4_A 90 LPKPRLSDDYHGTRCAGEIAAKKGNNF---------CGVGVGYNAKISGIRILSGD----------ITTEDEAASLIYGL 150 (503)
T ss_dssp CCCCCSTTTTHHHHHHHHHHCCSSSSS---------SCCCTTTTSEEEEEECTTSC----------CCHHHHHHHTTTTT
T ss_pred CCCCCCCCCChHHHHHHHHHhccCCCC---------CcEEECCCCEEEEEEeeCCC----------CChHHHHHHHHhHh
Confidence 111235788999999999999742221 24699999999999998743 57889999999999
Q ss_pred hCCceEEEeecCCCCCCC---CCccHHHHHHHHHH-----hCCcEEEEecCCCCCCCCCC--c--CCCcceeeeccCccc
Q 004047 294 RDGVHVLSISIGTNQPFA---FNRDGIAIGALNAV-----KHNILVACSAGNSGPAPSSL--S--NLAPWLITVGAGSLD 361 (777)
Q Consensus 294 ~~gvdVIn~SlG~~~~~~---~~~~~~~~a~~~a~-----~~Gi~vV~aAGN~G~~~~~~--~--~~ap~vitVgAs~~~ 361 (777)
+++ +|||||||...... .....+..++.++. .+|++||+||||+|...... . ..++++|+|||++.
T Consensus 151 ~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~- 228 (503)
T 2id4_A 151 DVN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH- 228 (503)
T ss_dssp TTC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT-
T ss_pred hcC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC-
Confidence 988 99999999843211 12334556666665 47999999999999653322 1 13478999998542
Q ss_pred cccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHH
Q 004047 362 RDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGME 441 (777)
Q Consensus 362 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~ 441 (777)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCC
Q 004047 442 VKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNA 521 (777)
Q Consensus 442 ~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~ 521 (777)
.+.++.||++||..
T Consensus 229 ------------------------------------------------------------------~~~~a~~S~~g~~~ 242 (503)
T 2id4_A 229 ------------------------------------------------------------------KDLHPPYSEGCSAV 242 (503)
T ss_dssp ------------------------------------------------------------------TSCCCTTCCCCTTE
T ss_pred ------------------------------------------------------------------CCCcCCcCCCCCcc
Confidence 24678999999986
Q ss_pred CCCCCcCCceee----CCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHH
Q 004047 522 LDPYILKPDITA----PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALM 597 (777)
Q Consensus 522 ~~d~~~KPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~ 597 (777)
|++| ||..|+++.... +.|..++|||||||||||++|||+|++|+|++++||++|+
T Consensus 243 --------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~ 302 (503)
T 2id4_A 243 --------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSI 302 (503)
T ss_dssp --------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred --------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHH
Confidence 8887 899999995431 6799999999999999999999999999999999999999
Q ss_pred hcccccCCC-CCcccCCCCCCCCCCceeeeccCccccCCCCce
Q 004047 598 TTAWMKNNK-ALPITNADGSIATPFSFGSGHFRPTKAADPGLV 639 (777)
Q Consensus 598 ~TA~~~~~~-g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv 639 (777)
.||+++... .............+..||+|+||+.+|++...-
T Consensus 303 ~tA~~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~~ 345 (503)
T 2id4_A 303 LSAVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKT 345 (503)
T ss_dssp HHCBCCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHTS
T ss_pred hccccCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHHhc
Confidence 999987643 111111111122356799999999999985443
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.6e-45 Score=389.28 Aligned_cols=231 Identities=26% Similarity=0.325 Sum_probs=195.3
Q ss_pred ccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCCC
Q 004047 134 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 213 (777)
Q Consensus 134 ~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 213 (777)
..|... +|+||+|||||||||++||+|.+. +...+.|..
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------- 62 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAS------------- 62 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSS-------------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCC-------------
Confidence 567655 999999999999999999999742 333333332
Q ss_pred CCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004047 214 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 293 (777)
Q Consensus 214 ~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 293 (777)
...|..||||||||||+|+. .||||+|+|+.+|+++.. + .+..+++++||+|++
T Consensus 63 ---~~~d~~gHGT~vAgii~~~~---------------~GvAp~a~l~~~~v~~~~--~------~~~~~~~~~ai~~~~ 116 (279)
T 3f7m_A 63 ---TARDGHGHGTHCAGTIGSKT---------------WGVAKKVSIFGVKVLDDS--G------SGSLSNIIAGMDFVA 116 (279)
T ss_dssp ---SSSCSSSHHHHHHHHHHCTT---------------TCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred ---CCCCCCCcHHHHHHHHhcCc---------------cccCCCCEEEEEEeeCCC--C------CcCHHHHHHHHHHHH
Confidence 12378999999999999861 499999999999999876 4 578999999999999
Q ss_pred hCC-------ceEEEeecCCCCCCCCCccHHHHHHHHHHhCCcEEEEecCCCCCCCCCC-cCCCcceeeeccCccccccc
Q 004047 294 RDG-------VHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL-SNLAPWLITVGAGSLDRDFV 365 (777)
Q Consensus 294 ~~g-------vdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~~~-~~~ap~vitVgAs~~~~~~~ 365 (777)
+++ ++|||||||.. ..+.+..++.++.++|++||+||||+|...... +...+++|+|||++.
T Consensus 117 ~~~~~~~~~~~~Vin~S~g~~-----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~----- 186 (279)
T 3f7m_A 117 SDRQSRNCPRRTVASMSLGGG-----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS----- 186 (279)
T ss_dssp HHGGGSCCTTEEEEEECCCEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-----
T ss_pred hccccccCCCCeEEEeCCCcC-----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC-----
Confidence 876 99999999982 456788888999999999999999999664333 345689999998542
Q ss_pred cceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCcccceEEEEecCCcchhhhhHHHhhc
Q 004047 366 GPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRA 445 (777)
Q Consensus 366 ~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~ 445 (777)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCC
Q 004047 446 GGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPY 525 (777)
Q Consensus 446 Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~d~ 525 (777)
.+.++.||++||..
T Consensus 187 --------------------------------------------------------------~~~~~~~S~~g~~~---- 200 (279)
T 3f7m_A 187 --------------------------------------------------------------NDVRSTFSNYGRVV---- 200 (279)
T ss_dssp --------------------------------------------------------------TSBBCTTCCBSTTC----
T ss_pred --------------------------------------------------------------CCCCCCCCCCCCCC----
Confidence 24788999999965
Q ss_pred CcCCceeeCCCcEEEcccCCCCCCcccCCcccccceeeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCC
Q 004047 526 ILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 605 (777)
Q Consensus 526 ~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~ 605 (777)
||+|||++|+++++. +.|..++|||||||+|||++|||+|++|. ++++||++|++||++...
T Consensus 201 ----di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~ 262 (279)
T 3f7m_A 201 ----DIFAPGTSITSTWIG-------------GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVL 262 (279)
T ss_dssp ----CEEEECSSEEEECGG-------------GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCC
T ss_pred ----eEEECCCCeEeecCC-------------CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccccc
Confidence 999999999999987 78999999999999999999999999999 999999999999997643
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=6.7e-43 Score=408.61 Aligned_cols=296 Identities=22% Similarity=0.215 Sum_probs=199.5
Q ss_pred cccccccCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCcccceecCCccccccccceeeeeeecccccccccCCCCCC
Q 004047 133 QDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNAT 212 (777)
Q Consensus 133 ~~~~~~g~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 212 (777)
..+|..+++|+||+|||||||||++||||.++- ..+.++|.++.
T Consensus 60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--------------------------~~~~~~~~~~~---------- 103 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTSS----------
T ss_pred HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--------------------------ccCcceeecCC----------
Confidence 379999999999999999999999999997430 11222333221
Q ss_pred CCCCCCCCCCCCccchhhccccCCCCCCCccCCcCCCceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHH-HH
Q 004047 213 EDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAI-DD 291 (777)
Q Consensus 213 ~~~~~~~D~~gHGThVAGiiaG~~~~~~~~~gg~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai-~~ 291 (777)
.+.....|..||||||||||||.. +..+ +.||||+|+|+.+|++++. + ....++++.|+ ++
T Consensus 104 ~dp~p~~~~~gHGThVAGiIAa~~---------n~~g-~~GVAp~A~l~~~rvl~~~--~------~~~~~~~~~a~~~~ 165 (600)
T 3hjr_A 104 DDPTPTDPDTAHGTSVSGIIAAVD---------NAIG-TKGIAPRAQLQGFNLLDDN--S------QQLQKDWLYALGDS 165 (600)
T ss_dssp SCCCCCSTTCCHHHHHHHHHHCCS---------SSSS-CCCSSTTCEEEEECTTSTT--C------CCCHHHHHHHTTSS
T ss_pred CCCCCCCCCCChHHHHHHHHhEeC---------CCCC-cEEeCCCCEEEEEEeecCC--C------CccHHHHHHHhhhh
Confidence 111234467899999999999862 1111 4699999999999999876 3 35677777766 67
Q ss_pred HHhCCceEEEeecCCCCCCCCCccH-----HHHHHHH--HHhCCcEEEEecCCCCCCCCCCc------------------
Q 004047 292 AIRDGVHVLSISIGTNQPFAFNRDG-----IAIGALN--AVKHNILVACSAGNSGPAPSSLS------------------ 346 (777)
Q Consensus 292 a~~~gvdVIn~SlG~~~~~~~~~~~-----~~~a~~~--a~~~Gi~vV~aAGN~G~~~~~~~------------------ 346 (777)
+..++++|||+|||.........+. +..++.. ...+|+++|+||||.+.......
T Consensus 166 ~~~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~ 245 (600)
T 3hjr_A 166 NASRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSN 245 (600)
T ss_dssp HHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTT
T ss_pred hhhcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCccccc
Confidence 7888999999999974322222222 1112221 23679999999999763210000
Q ss_pred ----CCCcceeeeccCccccccccceEeCCCcEEEeeeeccCCCCcceeeEEecccccCCcCcCCCCCCCCCCCCCCccc
Q 004047 347 ----NLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVK 422 (777)
Q Consensus 347 ----~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 422 (777)
...+++|+|||
T Consensus 246 ~d~~~~~~~~IsVgA----------------------------------------------------------------- 260 (600)
T 3hjr_A 246 LDPSNSNFWNLVVSA----------------------------------------------------------------- 260 (600)
T ss_dssp SSGGGGSSSEEEEEE-----------------------------------------------------------------
T ss_pred ccCccccCcceEEee-----------------------------------------------------------------
Confidence 00112222222
Q ss_pred ceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEE
Q 004047 423 GKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTV 502 (777)
Q Consensus 423 g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~ 502 (777)
T Consensus 261 -------------------------------------------------------------------------------- 260 (600)
T 3hjr_A 261 -------------------------------------------------------------------------------- 260 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCCccccccCCCCCCCCCCCcCCceeeCCCcE--------EEcccCCCCCC-------------cccCCcccccce
Q 004047 503 LHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNI--------LAAWSEASSPS-------------KLAFDKRIVKYT 561 (777)
Q Consensus 503 ~~~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I--------~sa~~~~~~~~-------------~~~~~~~~~~y~ 561 (777)
....+.++.||++|+.. +++|||.++ .+..++..... ..........|.
T Consensus 261 --~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (600)
T 3hjr_A 261 --LNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNG 330 (600)
T ss_dssp --ECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEE
T ss_pred --ecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCcee
Confidence 12356889999999987 899999762 22222211000 001112235688
Q ss_pred eeccccchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccccCCCCCccc---------------------CCCCCCCCC
Q 004047 562 IFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPIT---------------------NADGSIATP 620 (777)
Q Consensus 562 ~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~---------------------~~~~~~~~~ 620 (777)
.++|||||||||||++|||+|++|+|++++||++|++||++++....|+. ...|.. ..
T Consensus 331 ~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~-~s 409 (600)
T 3hjr_A 331 VMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMW-FS 409 (600)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCE-EB
T ss_pred ccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCce-Ec
Confidence 99999999999999999999999999999999999999999987655422 111222 24
Q ss_pred CceeeeccCccccCCCCc
Q 004047 621 FSFGSGHFRPTKAADPGL 638 (777)
Q Consensus 621 ~~~G~G~vn~~~Al~~~l 638 (777)
..||+|+||+.+|++.+.
T Consensus 410 ~~yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 410 PTYGFGLIDVNKALELAA 427 (600)
T ss_dssp TTTBTCBCCHHHHHHHHT
T ss_pred cccCCceecHHHHHHHhh
Confidence 569999999999997443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=3e-25 Score=253.10 Aligned_cols=97 Identities=27% Similarity=0.394 Sum_probs=75.1
Q ss_pred ceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHh---CCceEEEeecCCCCCCCC---CccHHHHHHHH
Q 004047 250 TASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR---DGVHVLSISIGTNQPFAF---NRDGIAIGALN 323 (777)
Q Consensus 250 ~~~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~---~gvdVIn~SlG~~~~~~~---~~~~~~~a~~~ 323 (777)
.+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||... ..+ ....+..++.+
T Consensus 273 ~~~gvAp~a~i~~~~~~-------------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e-~~~~~~~~~~~~~~~~~ 338 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP-------------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPE-DSWAPASIAAMNRAFLD 338 (552)
T ss_dssp HHHHHCTTSEEEEEECC-------------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEG-GGSCHHHHHHHHHHHHH
T ss_pred hhhccCCCCeEEEEEcC-------------CCCchHHHHHHHHHhcccCCCCEEEecccCCc-ccCCHHHHHHHHHHHHH
Confidence 35799999999999972 245789999999998 79999999999832 111 12356667778
Q ss_pred HHhCCcEEEEecCCCCCCCC------C--CcCCCcceeeeccCcc
Q 004047 324 AVKHNILVACSAGNSGPAPS------S--LSNLAPWLITVGAGSL 360 (777)
Q Consensus 324 a~~~Gi~vV~aAGN~G~~~~------~--~~~~ap~vitVgAs~~ 360 (777)
|..+||+||+||||+|.... . .+...|+|++||+++.
T Consensus 339 a~~~Gi~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 339 AAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp HHHTTCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred HHhCCeEEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 88999999999999996532 2 2234599999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.83 E-value=2.8e-21 Score=210.10 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=77.7
Q ss_pred eeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHh-CCceEEEeecCCCCCC---CCCccHHHHHHHHHHhC
Q 004047 252 SGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR-DGVHVLSISIGTNQPF---AFNRDGIAIGALNAVKH 327 (777)
Q Consensus 252 ~GvAP~A~l~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~-~gvdVIn~SlG~~~~~---~~~~~~~~~a~~~a~~~ 327 (777)
..+||+++++.|++.+.. + +..++++++|+||++ ++++|||||||..... ....+.+..++.+|..+
T Consensus 90 g~~aP~a~~~~~~~~~~~--~-------~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~ 160 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQS--A-------SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQ 160 (372)
T ss_dssp HHTTSCEEEEEEEEECTT--S-------STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHT
T ss_pred hhcCCCCcEEEEEeCCCC--C-------cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhC
Confidence 357899999999998654 2 567889999999998 8999999999983210 11234566777788899
Q ss_pred CcEEEEecCCCCCCCC-------------CCcCCCcceeeeccCccc
Q 004047 328 NILVACSAGNSGPAPS-------------SLSNLAPWLITVGAGSLD 361 (777)
Q Consensus 328 Gi~vV~aAGN~G~~~~-------------~~~~~ap~vitVgAs~~~ 361 (777)
||+||+||||+|...+ ..+...|+|++||+++..
T Consensus 161 Gitvv~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 161 GQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp TCEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CcEEEEEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 9999999999996532 122345999999998653
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.94 E-value=1.7e-09 Score=122.45 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=51.7
Q ss_pred HHHHHHHHHH--hCCceEEEeecCCCCCC--CCCccHHHHHHHHHHhCCcEEEEecCCCCCCCC----------CCcCCC
Q 004047 284 DMLAAIDDAI--RDGVHVLSISIGTNQPF--AFNRDGIAIGALNAVKHNILVACSAGNSGPAPS----------SLSNLA 349 (777)
Q Consensus 284 ~i~~ai~~a~--~~gvdVIn~SlG~~~~~--~~~~~~~~~a~~~a~~~Gi~vV~aAGN~G~~~~----------~~~~~a 349 (777)
.++..+++.. .+-++|||+|||..... ..+.+.+..++.++..+||.|++|+||+|.... ..+...
T Consensus 284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~ 363 (544)
T 3edy_A 284 PFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASS 363 (544)
T ss_dssp HHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTC
T ss_pred cHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCC
Confidence 3455444443 35689999999983211 112234555667788999999999999996532 223346
Q ss_pred cceeeeccCcc
Q 004047 350 PWLITVGAGSL 360 (777)
Q Consensus 350 p~vitVgAs~~ 360 (777)
|||++||+++.
T Consensus 364 P~VtaVGgT~l 374 (544)
T 3edy_A 364 PYVTTVGGTSF 374 (544)
T ss_dssp TTSEEEEEEEE
T ss_pred CcEEEEeeeec
Confidence 99999999764
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.85 E-value=2.5e-09 Score=95.52 Aligned_cols=77 Identities=13% Similarity=0.070 Sum_probs=64.0
Q ss_pred CCcEEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhccceEEEeeeeEeEEEEEcCHHHHHHhhcCCCeEEEEeCC
Q 004047 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSELEEVVSVYPSH 101 (777)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~ 101 (777)
..+.|||+|++... ......|.+|+.+++.+ .....+++|+|++.|+||+++++++++++|+++|+|.+||+|+
T Consensus 36 ip~~YIV~lk~~~~-----~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~ 109 (114)
T 2w2n_P 36 LPGTYVVVLKEETH-----LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDS 109 (114)
T ss_dssp EEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEE
T ss_pred CCCcEEEEECCCCC-----HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCc
Confidence 45799999998762 24455888999887754 2234689999999999999999999999999999999999998
Q ss_pred CCccc
Q 004047 102 PEKYS 106 (777)
Q Consensus 102 ~~~~~ 106 (777)
.++
T Consensus 110 --~v~ 112 (114)
T 2w2n_P 110 --SVF 112 (114)
T ss_dssp --EEE
T ss_pred --eEe
Confidence 654
No 39
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.80 E-value=2.9e-08 Score=96.28 Aligned_cols=95 Identities=22% Similarity=0.150 Sum_probs=76.8
Q ss_pred CCCCCCCCCCCCCc-------ccceEEEEecCC-cchhhhhHHHhhcCceEEEEecCCCCCCcc---c-cCCccccEEEE
Q 004047 407 ETNQCLPGSLTPEK-------VKGKIVLCMRGS-GFKLSKGMEVKRAGGVGLILGNSPANGNEY---S-YDAHYLPATAV 474 (777)
Q Consensus 407 ~~~~c~~~~~~~~~-------~~g~ivl~~~g~-~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~---~-~~~~~~p~~~i 474 (777)
....|.+....... .++||+|++||. |+|.+|..+++++||.++|+||+...+... . .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 45789987653322 579999999999 999999999999999999999985332221 1 22357999999
Q ss_pred eHHHHHHHHHHHhcCCCceEEEEeceE
Q 004047 475 LYDDAIKIHEYIKSTNNPTAIIKQART 501 (777)
Q Consensus 475 ~~~~g~~l~~~~~~~~~~~~~i~~~~~ 501 (777)
+..+|+.|++++..+..++++|.....
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~~ 188 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGKK 188 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCCc
Confidence 999999999999999999888887653
No 40
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.74 E-value=2.3e-08 Score=83.55 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=56.4
Q ss_pred cCCcEEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhccceEEEeeeeEeEEEEEcCHHHHHHhhcCCCeEEEEeC
Q 004047 21 KQKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSELEEVVSVYPS 100 (777)
Q Consensus 21 ~~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~ 100 (777)
...++|||.||+.... .. .+.+++++ ...++.++|++ |+||+++++++++++|+++|+|.+||+|
T Consensus 6 ~i~~~YIV~~k~~~~~----~~---~~~~~~~~-------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D 70 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFKS----CA---KKEDVISE-------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEED 70 (80)
T ss_dssp --CCEEEEEECTTCCS----HH---HHHHHHHT-------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEEC
T ss_pred cCCCCEEEEECCCCCh----HH---HHHHHHHH-------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeC
Confidence 3568999999988732 11 12233322 12479999998 9999999999999999999999999999
Q ss_pred CCCccccccCC
Q 004047 101 HPEKYSLQTTR 111 (777)
Q Consensus 101 ~~~~~~~~~~~ 111 (777)
+ .++++++.
T Consensus 71 ~--~v~~~tt~ 79 (80)
T 3cnq_P 71 K--LYRALSAT 79 (80)
T ss_dssp C--EEEECCC-
T ss_pred c--EEEEeeec
Confidence 9 88887654
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.53 E-value=8.7e-08 Score=86.52 Aligned_cols=77 Identities=13% Similarity=0.070 Sum_probs=58.9
Q ss_pred CCcEEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhccceEEEeeeeEeEEEEEcCHHHHHHhhcCCCeEEEEeCC
Q 004047 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSELEEVVSVYPSH 101 (777)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~ 101 (777)
..++|||+||+... ......|.+++....... ....++.++|++.|+||++++++++++.|+++|+|.+|++++
T Consensus 46 Ip~~YIV~~K~~~~-----~~~~~~~~~~l~~~~~~r-~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~ 119 (124)
T 2qtw_A 46 LPGTYVVVLKEETH-----LSQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDS 119 (124)
T ss_dssp EEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEE
T ss_pred CCCCEEEEECCCCC-----HHHHHHHHHHHHHHHhhc-ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCc
Confidence 35799999998873 233445555665543211 023579999998999999999999999999999999999998
Q ss_pred CCccc
Q 004047 102 PEKYS 106 (777)
Q Consensus 102 ~~~~~ 106 (777)
.++
T Consensus 120 --~v~ 122 (124)
T 2qtw_A 120 --SVF 122 (124)
T ss_dssp --EEE
T ss_pred --eEe
Confidence 654
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.52 E-value=2.5e-07 Score=76.13 Aligned_cols=69 Identities=17% Similarity=0.285 Sum_probs=56.6
Q ss_pred cEEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhccceEEEee-eeEeEEEEEcCHHHHHHhhcC--CCeEEEEeC
Q 004047 24 QVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYK-HSINGFSAVLTPDEAARLSEL--EEVVSVYPS 100 (777)
Q Consensus 24 ~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~-~~~ng~s~~~~~~~~~~L~~~--~~V~~V~~~ 100 (777)
+.|||.||+.. +......|.+++.+.. .++.+.|+ ..|+||+++++++.+++|+++ |.|.+||+|
T Consensus 3 ~sYIV~lk~~~-----~~~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D 70 (76)
T 1v5i_B 3 GKFIVIFKNDV-----SEDKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (76)
T ss_dssp EEEEEEECTTC-----CHHHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred ceEEEEECCCC-----CHHHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence 68999999887 2345556777776653 36889994 789999999999999999999 889999999
Q ss_pred CCCccc
Q 004047 101 HPEKYS 106 (777)
Q Consensus 101 ~~~~~~ 106 (777)
+ .++
T Consensus 71 ~--~v~ 74 (76)
T 1v5i_B 71 H--VAH 74 (76)
T ss_dssp C--EEE
T ss_pred c--EEe
Confidence 8 654
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.23 E-value=0.00043 Score=54.72 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=36.6
Q ss_pred ccceEEEeeeeEeEEEEEcCHHHHHHhhcCCCeEEEEeCC
Q 004047 62 RASHLYSYKHSINGFSAVLTPDEAARLSELEEVVSVYPSH 101 (777)
Q Consensus 62 ~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~~~V~~V~~~~ 101 (777)
..++.++|.. +++++++||++.++.|+++|+|++|++|.
T Consensus 22 gG~i~~~~~~-I~a~~~~lp~~~~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 22 GGHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp TCEEEEECSS-SSEEEEEECGGGHHHHHTSTTEEEEEECC
T ss_pred CCEEEEEecC-CcEEEEEeCHHHHHHHhcCCCceEEecCc
Confidence 4689999977 99999999999999999999999999998
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.67 E-value=0.0045 Score=68.26 Aligned_cols=73 Identities=18% Similarity=0.262 Sum_probs=59.7
Q ss_pred CCCCCcccceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCc--cc-cCCccccEEEEeHHHHHHHHHHHh
Q 004047 415 SLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE--YS-YDAHYLPATAVLYDDAIKIHEYIK 487 (777)
Q Consensus 415 ~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~--~~-~~~~~~p~~~i~~~~g~~l~~~~~ 487 (777)
++...+++|||||++||.|.|..|..++.++||.|+|+|++...... +. .....+|...++.++++.|.+++.
T Consensus 107 D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 107 DVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred hcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 34445899999999999999999999999999999999998632211 11 134678999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=96.04 E-value=0.024 Score=62.76 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=61.6
Q ss_pred CCcccceEEEEecCCcc---------hhhh----hHHHhhcCceEEEEecCCCCCCc--------cccCCccccEEEEeH
Q 004047 418 PEKVKGKIVLCMRGSGF---------KLSK----GMEVKRAGGVGLILGNSPANGNE--------YSYDAHYLPATAVLY 476 (777)
Q Consensus 418 ~~~~~g~ivl~~~g~~~---------~~~~----~~~~~~~Ga~gvi~~n~~~~~~~--------~~~~~~~~p~~~i~~ 476 (777)
+.+++|||||++|+.|. +..| ..++.++||+|+|++|+...... .......||++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 56899999999998874 3344 45799999999999997432210 111245799999999
Q ss_pred HHHHHHHHHHhcCCCceEEEEec
Q 004047 477 DDAIKIHEYIKSTNNPTAIIKQA 499 (777)
Q Consensus 477 ~~g~~l~~~~~~~~~~~~~i~~~ 499 (777)
++++.|.+.+..+....+++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998877666665544
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.59 E-value=0.014 Score=67.19 Aligned_cols=69 Identities=16% Similarity=0.191 Sum_probs=55.3
Q ss_pred CcccceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCCCCc------------------cc----------------c
Q 004047 419 EKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE------------------YS----------------Y 464 (777)
Q Consensus 419 ~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~------------------~~----------------~ 464 (777)
.+++|||||+++|.|.+..|..++.++||.|+|+|++...... .. .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 5899999999999999999999999999999999997542100 00 0
Q ss_pred CCccccEEEEeHHHHHHHHHHHh
Q 004047 465 DAHYLPATAVLYDDAIKIHEYIK 487 (777)
Q Consensus 465 ~~~~~p~~~i~~~~g~~l~~~~~ 487 (777)
....||+..|+.++++.|++.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12368999999999999987543
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.41 E-value=0.017 Score=67.34 Aligned_cols=71 Identities=28% Similarity=0.410 Sum_probs=56.2
Q ss_pred CCcccceEEEEecCCcchhhhhHHHhhcCceEEEEecCCCC----C--------------C---cc-----ccC------
Q 004047 418 PEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPAN----G--------------N---EY-----SYD------ 465 (777)
Q Consensus 418 ~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~----~--------------~---~~-----~~~------ 465 (777)
..+++|||||+++|.|.+.+|..+|+++||.|+|+|+++.+ + . .+ .++
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 45799999999999999999999999999999999986210 0 0 00 011
Q ss_pred ----------------CccccEEEEeHHHHHHHHHHHhc
Q 004047 466 ----------------AHYLPATAVLYDDAIKIHEYIKS 488 (777)
Q Consensus 466 ----------------~~~~p~~~i~~~~g~~l~~~~~~ 488 (777)
...||+..|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 24789999999999999987653
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.71 E-value=0.22 Score=44.35 Aligned_cols=52 Identities=13% Similarity=0.239 Sum_probs=43.7
Q ss_pred CceEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEEC
Q 004047 686 NGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 742 (777)
Q Consensus 686 ~~~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 742 (777)
..+.+.+++|+|.|..+..|+..... -++++|..-.+ ++|+++.++|+|.+.
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~ 91 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQ 91 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCS
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcC
Confidence 35688899999999999999887643 36678999988 579999999999984
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=90.39 E-value=2.6 Score=38.32 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=59.0
Q ss_pred ceEEEEEEEEecCCCCeeEEEEeeCC----CccEEEEecceEEEccCCcEEEEEEEEEECccccc-ccCCCceEEEEEEE
Q 004047 687 GTVIVKRTVTNVGGSKSVYFFSAKPP----MGVSVKANPSILFFDHIGQKKSFTITVRLGSETTR-QGLTKQYVFGWYRW 761 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~~ty~~~~~~~----~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~G~~~~ 761 (777)
...+-+++++|.|..+.+|++..... ..--++++|..-++ .+|++..++|++.+.+.... ......-.+--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 45677889999999999999985421 11236678999888 57999999999997532000 00111222445555
Q ss_pred E-CCccEEEeeEEEEe
Q 004047 762 T-DGLHLVRSPMAVSF 776 (777)
Q Consensus 762 ~-~~~~~v~~P~~~~~ 776 (777)
. +++.+..+|+...|
T Consensus 122 ~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNY 137 (140)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EeecCCcEEEEEeccc
Confidence 4 55677788887665
No 50
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.54 E-value=0.2 Score=61.51 Aligned_cols=24 Identities=29% Similarity=0.552 Sum_probs=22.7
Q ss_pred cCCCCceEEEEeecCCCCCCCCCC
Q 004047 139 ARYGQDVIVGLVDNGVWPESKSFS 162 (777)
Q Consensus 139 g~~G~GV~VgVIDtGid~~Hp~f~ 162 (777)
.+.|+||+|||+|||||+.+|.|+
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 789999999999999999999984
No 51
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=88.18 E-value=0.32 Score=53.60 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=27.4
Q ss_pred cCCCCccccccCCCCCCCCCCCcCCceeeCCCcEEEcccC
Q 004047 505 TQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSE 544 (777)
Q Consensus 505 ~~~~~~~a~fSS~Gp~~~~d~~~KPDI~APG~~I~sa~~~ 544 (777)
....+.++.||++||.. ||+|||++|+++++.
T Consensus 180 ~~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 180 VDSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp ECTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred ECCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 34467899999999865 999999999999875
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=87.96 E-value=6.4 Score=34.39 Aligned_cols=54 Identities=13% Similarity=0.052 Sum_probs=44.2
Q ss_pred eEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEECc
Q 004047 688 TVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGS 743 (777)
Q Consensus 688 ~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 743 (777)
.-.+++.+.|....+.+|++++...+++.+. .+..+++ ++|+..++.|.+..++
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 3568899999999999999999987776653 3566877 5789999999998864
No 53
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.55 E-value=1.7 Score=37.56 Aligned_cols=55 Identities=9% Similarity=0.122 Sum_probs=42.6
Q ss_pred ceEEEEEEEEecCCCCeeEEEEeeC-CCccEEEEecceEEEccCCcEEEEEEEEEEC
Q 004047 687 GTVIVKRTVTNVGGSKSVYFFSAKP-PMGVSVKANPSILFFDHIGQKKSFTITVRLG 742 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~~ty~~~~~~-~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 742 (777)
...+.+++++|.|+.+..|++.... +.+..++++|..-.+ ++|++++++|++.+.
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~ 81 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSI 81 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECC
Confidence 4577889999999999999984311 113347778999888 569999999999984
No 54
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=68.12 E-value=32 Score=39.98 Aligned_cols=87 Identities=16% Similarity=0.175 Sum_probs=48.5
Q ss_pred ceEEEEEEEEecCCCCeeE--EEEeeCCCccEEEEecc-------eEEEccCCcEEEEEEEEEECcccccccCCCceE--
Q 004047 687 GTVIVKRTVTNVGGSKSVY--FFSAKPPMGVSVKANPS-------ILFFDHIGQKKSFTITVRLGSETTRQGLTKQYV-- 755 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~~ty--~~~~~~~~g~~v~v~p~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-- 755 (777)
...+++++|||+|+.+..- .+.+..|.+. + ..|. ++.+ ++||++++++++...+=.+-....+.|+
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~-~-~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~ls~~d~~~~~w~ve 689 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSA-P-RTPPKQLRGFAKLNL-TPGQSGTATFNIRRRDLSYWDTASQKWVVP 689 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTS-S-SCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGGGCEEETTTTEEEEC
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCC-C-CchhHHhhhccccee-CCCCeEEEEEEEcHHHeeeeecCCCeEEEc
Confidence 3578999999999876544 4455555332 1 1232 2344 6899999999998742111111123442
Q ss_pred EEEEEEE--CCccEEEeeEEEEe
Q 004047 756 FGWYRWT--DGLHLVRSPMAVSF 776 (777)
Q Consensus 756 ~G~~~~~--~~~~~v~~P~~~~~ 776 (777)
.|...+. .+.+++|+--.+..
T Consensus 690 ~G~y~v~vG~sS~d~~l~~~~~v 712 (713)
T 3zyz_A 690 SGSFGISVGASSRDIRLTSTLSV 712 (713)
T ss_dssp CEEEEEEEESSSSCEEEEEEEEE
T ss_pred CceEEEEEECCCCCcceeEEEEE
Confidence 3655443 34566665444443
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=64.49 E-value=35 Score=33.18 Aligned_cols=67 Identities=10% Similarity=0.054 Sum_probs=44.1
Q ss_pred ceEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEECcccccccCCCceEEEEEEEE
Q 004047 687 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYVFGWYRWT 762 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~G~~~~~ 762 (777)
...+.+++++|.|+.+.+++.... |.-+.+...|.. + ++|++.+++|+++.. ....-+...+.|...
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~~-p~~~~~~~~~~~--I-~PG~~g~I~vt~~~~-----~~~~~G~~~~~i~v~ 85 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVSL-PSFVSLDDRAFR--L-QAREPRELNLSLAVP-----RNMPPGMKDEPLVLE 85 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEEC-CTTEECSCCEEE--E-CSSSCEEEEEEECCC-----TTCCSEEEEEEEEEE
T ss_pred CcceEEEEEEeCCCCceEEEeccC-CCceEeeeCcce--e-CCCCceEEEEEEcch-----hcccCCceeeEEEEE
Confidence 346678899999999999887533 555554334444 4 679999999999884 222233445655554
No 56
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=63.99 E-value=62 Score=34.14 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=44.3
Q ss_pred ceEEEEEEEEecCCCCeeEEEEeeCCCccE----EEEecceEEEccCCcEEEEEEEEEECc
Q 004047 687 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVS----VKANPSILFFDHIGQKKSFTITVRLGS 743 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~~ty~~~~~~~~g~~----v~v~p~~~~~~~~~~~~~~~v~~~~~~ 743 (777)
...+-++|++|+|..+.+|.+......... ++++|..-++ .+|++++++|++.+.+
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSK 105 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCT
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECH
Confidence 567788899999999999999765332222 6778999888 5799999999998864
No 57
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=56.94 E-value=40 Score=29.75 Aligned_cols=52 Identities=17% Similarity=0.049 Sum_probs=35.5
Q ss_pred CceEEEEEEEEecCCCC-eeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEE
Q 004047 686 NGTVIVKRTVTNVGGSK-SVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 741 (777)
Q Consensus 686 ~~~~t~~~tvtn~~~~~-~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 741 (777)
....++++||+|.|..+ ..|++.+.. .|-.+.-. .+.+ ++|++++|+++...
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 45799999999999754 677777654 34444322 3455 57888887777654
No 58
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=55.31 E-value=68 Score=27.98 Aligned_cols=71 Identities=7% Similarity=-0.093 Sum_probs=43.6
Q ss_pred CceEEEEEEEEecCCCCee--------EEEEeeCCCccEEE---------EecceEEEccCCcEEEEEEEEEECcccccc
Q 004047 686 NGTVIVKRTVTNVGGSKSV--------YFFSAKPPMGVSVK---------ANPSILFFDHIGQKKSFTITVRLGSETTRQ 748 (777)
Q Consensus 686 ~~~~t~~~tvtn~~~~~~t--------y~~~~~~~~g~~v~---------v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~ 748 (777)
.+...++++|+|.++.+.+ |.+.+....|-.|- -.....++ ++||+++|+.+.... .
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~~-----~ 90 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKEV-----P 90 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESSC-----C
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCCC-----C
Confidence 3578899999999976543 44455544454443 11224556 679999999998731 2
Q ss_pred cCCCceEEEEEEEE
Q 004047 749 GLTKQYVFGWYRWT 762 (777)
Q Consensus 749 ~~~~~~~~G~~~~~ 762 (777)
.+....+.+.+.-+
T Consensus 91 ~pG~Ytl~a~l~~~ 104 (120)
T 3isy_A 91 EPGTYEVKVTFKGR 104 (120)
T ss_dssp CSEEEEEEEEECCE
T ss_pred CCccEEEEEEEEee
Confidence 23334466666543
No 59
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=49.62 E-value=69 Score=27.72 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=41.5
Q ss_pred EEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEEC
Q 004047 689 VIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 742 (777)
Q Consensus 689 ~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 742 (777)
.+.+++|+|..+....|++....|.- ..|.|..=.+ .+|++.++.|+.++.
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 36789999999999999999887755 4467887666 679999999998873
No 60
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=49.33 E-value=51 Score=28.93 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=43.3
Q ss_pred ceEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEEC
Q 004047 687 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 742 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 742 (777)
...+-.++|+|.++....|++....|. ...|.|..=.+ .++++..+.|+++..
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~--~y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPR--RYCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGG--GEEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCC--ceEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 456788999999999999999888774 45578887666 679999999998873
No 61
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=47.51 E-value=31 Score=40.19 Aligned_cols=66 Identities=21% Similarity=0.405 Sum_probs=41.1
Q ss_pred CCCCCeeEeecC-----CceEEEEEEEEecCCCCe--eEEEEeeCCCccEEEEecc-------eE-EEccCCcEEEEEEE
Q 004047 674 NLNYPSIAIPNL-----NGTVIVKRTVTNVGGSKS--VYFFSAKPPMGVSVKANPS-------IL-FFDHIGQKKSFTIT 738 (777)
Q Consensus 674 ~ln~ps~~~~~~-----~~~~t~~~tvtn~~~~~~--ty~~~~~~~~g~~v~v~p~-------~~-~~~~~~~~~~~~v~ 738 (777)
-|.|.+|...++ .+..+++++|||+|+.+. +-.+.+..|.+- + ..|. .+ .+ ++||+++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~-~~P~k~L~gF~kv~~L-~pGes~~V~~~ 673 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGK-I-DKPFQELKAFHKTRLL-NPGESEEVVLE 673 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSS-S-CCCSCEEEEEEECCCB-CTTCEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCC-C-CCchHHhhcccccccC-CCCCeEEEEEE
Confidence 345555544433 346889999999998654 444556665431 1 1232 12 23 68999999999
Q ss_pred EEEC
Q 004047 739 VRLG 742 (777)
Q Consensus 739 ~~~~ 742 (777)
+...
T Consensus 674 l~~~ 677 (721)
T 2x41_A 674 IPVR 677 (721)
T ss_dssp EEGG
T ss_pred ECHH
Confidence 9874
No 62
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=46.85 E-value=1.2e+02 Score=29.34 Aligned_cols=52 Identities=15% Similarity=0.048 Sum_probs=34.6
Q ss_pred ceEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEE
Q 004047 687 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 741 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 741 (777)
...+.+++++|.|+.+...+-. +..-|...- +...-.+ ++||+.+++|+++.
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~v-~~scgct~~-~~~~~~i-~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHSV-TTRNPALTA-VPDRTEI-KPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEEE-EECSTTEEE-EESCSEE-CTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCEEEEEE-EeCCCCEee-ecCCccC-CCCCEEEEEEEEec
Confidence 4577889999999988777532 222343322 2223334 67999999999987
No 63
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=45.30 E-value=67 Score=27.45 Aligned_cols=49 Identities=18% Similarity=0.184 Sum_probs=40.5
Q ss_pred EEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEE
Q 004047 690 IVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 741 (777)
Q Consensus 690 t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 741 (777)
+-+++|+|..+....|++....|.- ..|.|..=.+ .+|++.++.|+.+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCC
Confidence 4688999999999999999888754 4567887666 67999999999887
No 64
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=45.02 E-value=57 Score=38.65 Aligned_cols=155 Identities=19% Similarity=0.217 Sum_probs=79.9
Q ss_pred cceeeccccchhhHHHHHHHHHHHHCCCCC-HHHHHHHHHhcccccCCCCCcccCCC---CCCCCCCcee--eeccCccc
Q 004047 559 KYTIFSGTSMSCPHVAAAAALLKAIHPDWS-SAAIRSALMTTAWMKNNKALPITNAD---GSIATPFSFG--SGHFRPTK 632 (777)
Q Consensus 559 ~y~~~sGTSmAaP~VAG~aALl~q~~P~~s-~~~ik~~L~~TA~~~~~~g~~~~~~~---~~~~~~~~~G--~G~vn~~~ 632 (777)
-...++|..++-|.+.-+.|+|..++|.-- ...|-++|.--..|-.. -|++-.. ..+... .|. .|+
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGk--LP~T~p~~~~d~P~~~-~~~~~~g~----- 689 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGK--LSLSWPFKLQDNPAFL-NFKTEFGR----- 689 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCC--CSSCBCSSGGGSTTTT-SCSCBTTE-----
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCC--CceeeeCchhhCCccc-cCCCCCCc-----
Confidence 345677888777877777888888888665 56777888766654321 1111000 011100 011 111
Q ss_pred cCCCCceeeCch-hhHHHhhhcCCCCCCCCcccCCCCCCC-CCCCCCCeeEee--cC---CceEEEEEEEEecC-CCCee
Q 004047 633 AADPGLVYDASY-EDYLLYLCSHGFSFTNPVFRCPNKPPS-ALNLNYPSIAIP--NL---NGTVIVKRTVTNVG-GSKSV 704 (777)
Q Consensus 633 Al~~~lv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ln~ps~~~~--~~---~~~~t~~~tvtn~~-~~~~t 704 (777)
..|.... -.|.-|... .+. +... .+-|.|.+|... ++ .+..+++++|||+| +.+..
T Consensus 690 -----~~y~eg~~vgYR~y~~~----------~~~-plfPFG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~ 753 (845)
T 3abz_A 690 -----VIYGEDIFVGYRYYEKL----------QRK-VAFPFGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGS 753 (845)
T ss_dssp -----EECTTTTCCTHHHHHHH----------TCC-CSBCTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEE
T ss_pred -----eeccCCccCCCcchhcC----------CCc-eeecccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcc
Confidence 1122110 112222100 000 0000 234667766665 43 35689999999999 76544
Q ss_pred E--EEEeeCCCccEEEEecc-------eEEEccCCcEEEEEEEEE
Q 004047 705 Y--FFSAKPPMGVSVKANPS-------ILFFDHIGQKKSFTITVR 740 (777)
Q Consensus 705 y--~~~~~~~~g~~v~v~p~-------~~~~~~~~~~~~~~v~~~ 740 (777)
- .+.+..|.+- + ..|. .+.+ ++||++++++++.
T Consensus 754 eVvQlYv~~~~~~-~-~~P~k~L~gF~kv~L-~pGes~~V~~~l~ 795 (845)
T 3abz_A 754 EVVQVYFSALNSK-V-SRPVKELKGFEKVHL-EPGEKKTVNIDLE 795 (845)
T ss_dssp EEEEEEEEESSCS-S-CCCSCEEEEEEEEEE-CTTCEEEEEEEEE
T ss_pred eeeeeeEeCCCCC-c-chhhheeccceeEEE-CCCCEEEEEEEeC
Confidence 4 3444444321 1 1232 2344 6899999999998
No 65
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=44.55 E-value=46 Score=30.36 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=42.7
Q ss_pred eEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEEC
Q 004047 688 TVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 742 (777)
Q Consensus 688 ~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 742 (777)
..+-.++|+|..+....|++....|.- ..|.|..=.+ .++++.++.|+++..
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 445689999999999999999888854 5578988766 679999999999873
No 66
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=43.97 E-value=53 Score=28.82 Aligned_cols=52 Identities=12% Similarity=0.124 Sum_probs=42.3
Q ss_pred eEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEEC
Q 004047 688 TVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 742 (777)
Q Consensus 688 ~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 742 (777)
..+-.++|+|.++....|.+....|.- ..|.|..=.+ .++++..+.|+++.-
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecCC
Confidence 355678999999999999999888865 4567887766 578999999998773
No 67
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=39.53 E-value=21 Score=26.97 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=27.6
Q ss_pred cchhhHHHHHHHHHHHHCCCCCHHHHHHHHHhcccc
Q 004047 567 SMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWM 602 (777)
Q Consensus 567 SmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~ 602 (777)
|-..|..--.+..|++.||+++...|+..|...-..
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 334444556678899999999999999999876543
No 68
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=38.27 E-value=2e+02 Score=32.11 Aligned_cols=62 Identities=19% Similarity=0.168 Sum_probs=42.1
Q ss_pred CCeeEeecCCceEEEEEEEEecCCCCeeE-EEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEEC
Q 004047 677 YPSIAIPNLNGTVIVKRTVTNVGGSKSVY-FFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 742 (777)
Q Consensus 677 ~ps~~~~~~~~~~t~~~tvtn~~~~~~ty-~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 742 (777)
.|.++++.- ++.+++++|+|-+..+..- ++++..|.+.++.. ....+ ++|++.++.++|+.+
T Consensus 364 ~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~ 426 (601)
T 1w8o_A 364 IPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVP 426 (601)
T ss_dssp CCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECC
T ss_pred CccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecC
Confidence 466666643 5788999999977543322 34456678888776 33444 568898888888885
No 69
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=36.35 E-value=62 Score=29.21 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=42.7
Q ss_pred ceEEEEEEEEecCCCCeeEEEEeeCCCccEEEEecceEEEccCCcEEEEEEEEEEC
Q 004047 687 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 742 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 742 (777)
...+-.++|+|..+....|++....|.- ..|.|..=.+ .++++..+.|+++..
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 3456789999999999999999888854 4567887655 679999999998873
No 70
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=30.03 E-value=1.5e+02 Score=25.34 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=32.2
Q ss_pred CCeeEeecCCceEEEEEEEEecCCCCeeEEEE---eeCCCccEEEEecceEEEccCCc-EEEEEEEEEE
Q 004047 677 YPSIAIPNLNGTVIVKRTVTNVGGSKSVYFFS---AKPPMGVSVKANPSILFFDHIGQ-KKSFTITVRL 741 (777)
Q Consensus 677 ~ps~~~~~~~~~~t~~~tvtn~~~~~~ty~~~---~~~~~g~~v~v~p~~~~~~~~~~-~~~~~v~~~~ 741 (777)
-+++.+.+-.+..+++++.+.-.....+.... ..+..|....-...+|+|.+ || +++|+|.+.-
T Consensus 9 ~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~-Get~k~i~V~I~d 76 (114)
T 3e9t_A 9 PGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPP-GVDEQRFRIEVID 76 (114)
T ss_dssp SSEEEEETTCCEEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECT-TCCEEEEEEEBCC
T ss_pred CCEEEEEcCCeEEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEcceEEEEeC-CcEEEEEEEEEEc
Confidence 34566665445555555444422222222222 12334555555566899954 55 5666666544
No 71
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=29.41 E-value=2.6e+02 Score=23.62 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=24.3
Q ss_pred ceEEEEEEEEecCCCC-eeEEEEeeCCCccEEE
Q 004047 687 GTVIVKRTVTNVGGSK-SVYFFSAKPPMGVSVK 718 (777)
Q Consensus 687 ~~~t~~~tvtn~~~~~-~ty~~~~~~~~g~~v~ 718 (777)
+..+.+++|+|.|..+ ..|+++..-|.|..|+
T Consensus 15 ~Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it 47 (107)
T 3ndz_E 15 SGASVNVTIKNNGTTPINGWTLKWTMPINQTIT 47 (107)
T ss_dssp SEEEEEEEEEECSSSCEESCEEEEECCTTEEEE
T ss_pred CCEEEEEEEEeCCCCcccCcEEEEEcCCCCEEe
Confidence 4577889999999765 4589988888766554
No 72
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=27.42 E-value=46 Score=30.50 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=26.0
Q ss_pred ccccchhhHHHHHHHHHHHHCCCCCHHHHHHH
Q 004047 564 SGTSMSCPHVAAAAALLKAIHPDWSSAAIRSA 595 (777)
Q Consensus 564 sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~ 595 (777)
.|-| =|++|-|++|||.+.+-..+|++|.+.
T Consensus 80 ~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 80 FGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp EEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred eeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 3444 389999999999999999999998653
No 73
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=23.71 E-value=17 Score=31.69 Aligned_cols=49 Identities=20% Similarity=0.240 Sum_probs=30.0
Q ss_pred EEEEEEecCCCCeeEEE--Eee-CCCccEEEEecceEEEc-cCCcEEEEEEEEEE
Q 004047 691 VKRTVTNVGGSKSVYFF--SAK-PPMGVSVKANPSILFFD-HIGQKKSFTITVRL 741 (777)
Q Consensus 691 ~~~tvtn~~~~~~ty~~--~~~-~~~g~~v~v~p~~~~~~-~~~~~~~~~v~~~~ 741 (777)
+.+-++|.+ ..+|++ .+. .|.|+++++.|..+++. ..-.+++|.|++..
T Consensus 57 ~~vDLs~l~--~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 57 VFVDLTEAG--EGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp EEEECTTCC--BEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEECccCC--CCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 344445554 344443 444 57899999999987764 23445667666655
No 74
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=23.40 E-value=44 Score=30.10 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=27.2
Q ss_pred eeeccccchhhHHHHHHHHHHHHCCCCCHHHHHH
Q 004047 561 TIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRS 594 (777)
Q Consensus 561 ~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~ 594 (777)
..+.|-| =|++|-|++|||.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 3445555 38999999999999999999999864
Done!