Query 004048
Match_columns 776
No_of_seqs 282 out of 879
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 12:34:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004048.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004048hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4diq_A Lysine-specific demethy 100.0 1.3E-47 4.4E-52 424.6 29.1 299 281-678 39-345 (489)
2 2xdv_A MYC-induced nuclear ant 100.0 1.1E-39 3.8E-44 358.8 17.3 253 285-635 15-270 (442)
3 1vrb_A Putative asparaginyl hy 100.0 3.5E-36 1.2E-40 320.7 24.5 209 292-567 26-252 (342)
4 4gjz_A Lysine-specific demethy 99.9 4.4E-22 1.5E-26 194.8 12.7 92 460-552 124-226 (235)
5 3al5_A HTYW5, JMJC domain-cont 99.8 1.4E-20 4.9E-25 199.8 12.7 102 450-552 150-265 (338)
6 3d8c_A Hypoxia-inducible facto 99.6 2E-15 6.9E-20 161.3 10.3 91 461-552 184-286 (349)
7 3k2o_A Bifunctional arginine d 99.4 5.4E-13 1.9E-17 142.6 7.4 105 461-578 173-297 (336)
8 2yu1_A JMJC domain-containing 99.1 5.1E-11 1.8E-15 132.0 7.6 107 458-578 194-307 (451)
9 3kv5_D JMJC domain-containing 99.1 3.3E-11 1.1E-15 134.7 5.8 109 458-578 264-377 (488)
10 3k3o_A PHF8, PHD finger protei 99.1 6.8E-11 2.3E-15 128.2 7.9 108 458-577 145-257 (371)
11 3kv9_A JMJC domain-containing 99.1 7.4E-11 2.5E-15 128.9 5.4 108 458-577 173-285 (397)
12 3kv4_A PHD finger protein 8; e 99.0 2.4E-10 8.1E-15 126.6 6.9 106 458-577 229-341 (447)
13 3pua_A GRC5, PHD finger protei 98.9 8.5E-10 2.9E-14 120.4 8.0 92 458-552 172-269 (392)
14 3pur_A Lysine-specific demethy 98.7 1.8E-08 6E-13 113.3 6.6 92 458-552 294-391 (528)
15 3l2h_A Putative sugar phosphat 96.1 0.035 1.2E-06 51.8 10.8 74 451-552 37-112 (162)
16 1yhf_A Hypothetical protein SP 96.1 0.017 5.6E-07 50.4 8.0 56 468-552 48-103 (115)
17 3fjs_A Uncharacterized protein 96.0 0.023 7.8E-07 50.7 8.4 56 468-552 44-99 (114)
18 3h8u_A Uncharacterized conserv 95.8 0.032 1.1E-06 49.4 8.6 63 462-552 41-104 (125)
19 1v70_A Probable antibiotics sy 95.8 0.035 1.2E-06 46.4 8.4 56 468-552 36-92 (105)
20 2ozj_A Cupin 2, conserved barr 95.6 0.032 1.1E-06 48.8 7.9 53 471-551 48-100 (114)
21 3lwc_A Uncharacterized protein 95.6 0.023 7.8E-07 51.8 7.1 62 460-551 40-101 (119)
22 4e2g_A Cupin 2 conserved barre 95.4 0.064 2.2E-06 47.5 9.0 62 462-552 43-104 (126)
23 2b8m_A Hypothetical protein MJ 95.3 0.036 1.2E-06 48.7 6.9 53 472-552 38-91 (117)
24 3rns_A Cupin 2 conserved barre 95.2 0.03 1E-06 55.9 7.0 54 471-552 47-100 (227)
25 2pfw_A Cupin 2, conserved barr 95.2 0.054 1.8E-06 47.1 7.7 53 472-552 45-97 (116)
26 2o8q_A Hypothetical protein; c 95.2 0.049 1.7E-06 48.9 7.6 60 466-552 48-108 (134)
27 2gu9_A Tetracenomycin polyketi 95.1 0.049 1.7E-06 46.6 7.1 56 468-552 29-87 (113)
28 4i4a_A Similar to unknown prot 95.1 0.11 3.8E-06 46.0 9.5 57 467-552 41-97 (128)
29 3ht1_A REMF protein; cupin fol 95.0 0.032 1.1E-06 50.2 5.8 65 461-552 40-104 (145)
30 3cew_A Uncharacterized cupin p 94.7 0.092 3.2E-06 46.7 8.1 63 461-552 27-91 (125)
31 1dgw_A Canavalin; duplicated s 94.7 0.044 1.5E-06 53.0 6.4 63 464-552 46-108 (178)
32 3ibm_A Cupin 2, conserved barr 94.6 0.11 3.7E-06 49.8 8.6 61 462-551 58-118 (167)
33 3kgz_A Cupin 2 conserved barre 94.5 0.13 4.6E-06 48.9 9.2 53 472-552 55-107 (156)
34 2q30_A Uncharacterized protein 94.4 0.11 3.6E-06 44.5 7.5 57 468-552 41-99 (110)
35 2oa2_A BH2720 protein; 1017534 94.2 0.12 4E-06 47.9 7.7 63 467-552 50-113 (148)
36 3d82_A Cupin 2, conserved barr 94.0 0.081 2.8E-06 44.6 5.9 51 473-551 41-92 (102)
37 1lr5_A Auxin binding protein 1 94.0 0.29 1E-05 45.7 10.2 65 467-551 48-112 (163)
38 3i7d_A Sugar phosphate isomera 93.8 0.22 7.5E-06 47.3 9.1 70 455-552 38-110 (163)
39 2vqa_A SLL1358 protein, MNCA; 93.7 0.14 4.8E-06 53.7 8.1 64 464-552 57-121 (361)
40 3fz3_A Prunin; TREE NUT allerg 93.6 0.12 4.1E-06 58.8 7.9 66 461-550 396-462 (531)
41 2opk_A Hypothetical protein; p 93.6 0.17 5.7E-06 45.1 7.4 24 529-552 75-98 (112)
42 1x82_A Glucose-6-phosphate iso 93.5 0.21 7.2E-06 48.7 8.5 56 474-552 86-144 (190)
43 1yfu_A 3-hydroxyanthranilate-3 93.4 0.23 7.7E-06 49.2 8.4 55 473-551 47-101 (174)
44 3jzv_A Uncharacterized protein 93.4 0.27 9.2E-06 47.3 8.9 53 472-552 64-116 (166)
45 2f4p_A Hypothetical protein TM 93.3 0.35 1.2E-05 44.9 9.4 53 472-552 59-112 (147)
46 1vj2_A Novel manganese-contain 93.3 0.088 3E-06 47.3 5.1 53 472-552 59-111 (126)
47 3lag_A Uncharacterized protein 93.3 0.035 1.2E-06 48.9 2.3 26 527-552 59-84 (98)
48 1y9q_A Transcriptional regulat 93.2 0.14 4.8E-06 48.9 6.6 50 475-552 120-169 (192)
49 3rns_A Cupin 2 conserved barre 93.2 0.25 8.6E-06 49.1 8.7 53 472-552 164-217 (227)
50 1fxz_A Glycinin G1; proglycini 93.1 0.23 7.9E-06 55.6 9.1 66 461-550 340-406 (476)
51 1o5u_A Novel thermotoga mariti 92.8 0.16 5.3E-06 45.2 5.8 59 463-551 34-92 (101)
52 3c3v_A Arachin ARAH3 isoform; 92.7 0.17 5.8E-06 57.3 7.4 66 461-550 374-440 (510)
53 1fi2_A Oxalate oxidase, germin 92.7 0.25 8.7E-06 48.3 7.8 61 472-552 83-144 (201)
54 2d5f_A Glycinin A3B4 subunit; 92.7 0.2 7E-06 56.3 7.9 67 461-551 369-436 (493)
55 3kgl_A Cruciferin; 11S SEED gl 92.5 0.19 6.4E-06 56.3 7.3 67 461-551 325-392 (466)
56 1y3t_A Hypothetical protein YX 92.5 0.2 6.8E-06 51.6 7.1 53 472-552 57-110 (337)
57 4b29_A Dimethylsulfoniopropion 92.5 0.19 6.7E-06 51.2 6.8 64 461-552 133-196 (217)
58 2vpv_A Protein MIF2, MIF2P; nu 92.5 0.25 8.4E-06 48.3 7.3 60 463-552 92-153 (166)
59 1vr3_A Acireductone dioxygenas 92.3 0.82 2.8E-05 45.7 10.9 83 442-552 62-152 (191)
60 1zvf_A 3-hydroxyanthranilate 3 92.2 0.42 1.4E-05 47.4 8.5 59 474-552 47-105 (176)
61 3ksc_A LEGA class, prolegumin; 92.1 0.26 8.8E-06 55.7 7.9 68 461-552 360-428 (496)
62 1j58_A YVRK protein; cupin, de 92.1 0.24 8.2E-06 52.6 7.3 64 463-551 83-146 (385)
63 2e9q_A 11S globulin subunit be 92.0 0.28 9.6E-06 54.7 7.9 66 461-550 324-390 (459)
64 3ul1_B Importin subunit alpha- 92.0 0.71 2.4E-05 50.6 11.0 126 25-159 59-193 (510)
65 3bcw_A Uncharacterized protein 91.9 0.12 4.1E-06 47.6 4.1 64 460-552 49-112 (123)
66 1o4t_A Putative oxalate decarb 91.9 0.24 8.1E-06 45.1 6.0 53 472-552 68-121 (133)
67 4h7l_A Uncharacterized protein 91.8 0.18 6.3E-06 49.0 5.5 57 463-548 48-107 (157)
68 2i45_A Hypothetical protein; n 91.8 0.17 5.8E-06 43.7 4.7 50 474-550 40-90 (107)
69 2ypd_A Probable JMJC domain-co 91.8 0.18 6E-06 55.4 5.9 43 525-577 291-333 (392)
70 3h7j_A Bacilysin biosynthesis 91.7 0.2 7E-06 50.2 5.8 26 527-552 184-209 (243)
71 1juh_A Quercetin 2,3-dioxygena 91.6 0.49 1.7E-05 50.4 9.0 56 470-552 261-316 (350)
72 3h7j_A Bacilysin biosynthesis 91.5 0.26 8.9E-06 49.4 6.4 56 468-552 42-98 (243)
73 4db8_A Armadillo-repeat protei 91.5 0.34 1.2E-05 46.6 6.9 136 18-159 7-146 (252)
74 2xlg_A SLL1785 protein, CUCA; 91.4 0.11 3.9E-06 53.1 3.7 75 468-552 51-127 (239)
75 2fqp_A Hypothetical protein BP 91.2 0.78 2.7E-05 39.2 8.2 55 472-552 29-84 (97)
76 3bu7_A Gentisate 1,2-dioxygena 91.1 0.79 2.7E-05 50.3 10.1 25 527-551 332-356 (394)
77 2vqa_A SLL1358 protein, MNCA; 91.0 0.37 1.3E-05 50.5 7.2 58 472-552 245-303 (361)
78 3tpo_A Importin subunit alpha- 90.6 0.65 2.2E-05 50.9 9.0 91 66-158 335-427 (529)
79 2d40_A Z3393, putative gentisa 90.4 0.48 1.6E-05 50.7 7.5 53 472-552 111-164 (354)
80 1j58_A YVRK protein; cupin, de 90.4 0.61 2.1E-05 49.5 8.3 61 468-552 265-326 (385)
81 1uij_A Beta subunit of beta co 90.3 0.34 1.2E-05 53.3 6.3 64 462-551 52-115 (416)
82 2y0o_A Probable D-lyxose ketol 90.2 0.8 2.7E-05 45.2 8.3 78 463-552 57-144 (175)
83 3s57_A Alpha-ketoglutarate-dep 90.2 1.8 6.2E-05 43.0 11.0 111 437-567 77-200 (204)
84 2ea7_A 7S globulin-1; beta bar 90.2 0.38 1.3E-05 53.2 6.7 64 462-551 64-127 (434)
85 4ask_A Lysine-specific demethy 90.1 2.4 8.3E-05 48.0 13.0 112 461-588 236-362 (510)
86 3qac_A 11S globulin SEED stora 90.0 0.57 1.9E-05 52.5 7.9 66 461-550 325-391 (465)
87 4axo_A EUTQ, ethanolamine util 89.7 0.3 1E-05 47.0 4.7 25 527-551 102-126 (151)
88 2bnm_A Epoxidase; oxidoreducta 89.7 2.1 7.3E-05 40.7 10.7 53 476-552 135-188 (198)
89 1y3t_A Hypothetical protein YX 89.7 0.72 2.5E-05 47.4 7.9 60 464-552 222-282 (337)
90 3nw4_A Gentisate 1,2-dioxygena 89.4 0.48 1.7E-05 51.6 6.6 26 527-552 142-167 (368)
91 4hxt_A De novo protein OR329; 89.1 0.58 2E-05 44.4 6.2 92 67-160 45-137 (252)
92 2d40_A Z3393, putative gentisa 89.1 1 3.4E-05 48.3 8.8 59 463-550 271-329 (354)
93 4db6_A Armadillo repeat protei 88.9 0.44 1.5E-05 44.6 5.2 89 68-158 98-187 (210)
94 3bu7_A Gentisate 1,2-dioxygena 88.7 1 3.4E-05 49.5 8.5 67 458-552 121-188 (394)
95 2qnk_A 3-hydroxyanthranilate 3 88.7 0.71 2.4E-05 48.8 7.0 55 474-552 44-98 (286)
96 2phl_A Phaseolin; plant SEED s 88.4 0.5 1.7E-05 51.8 5.9 72 462-551 242-314 (397)
97 3d0j_A Uncharacterized protein 88.4 0.46 1.6E-05 45.6 4.9 59 474-553 44-102 (140)
98 3ul1_B Importin subunit alpha- 88.4 0.74 2.5E-05 50.4 7.3 90 67-158 317-408 (510)
99 2gm6_A Cysteine dioxygenase ty 88.2 1.4 4.9E-05 44.0 8.6 76 468-565 87-165 (208)
100 1juh_A Quercetin 2,3-dioxygena 88.2 0.9 3.1E-05 48.4 7.6 65 464-552 52-119 (350)
101 2pyt_A Ethanolamine utilizatio 87.8 0.71 2.4E-05 42.8 5.7 49 473-550 68-116 (133)
102 2xxz_A Lysine-specific demethy 87.7 0.83 2.8E-05 49.3 6.9 87 461-551 202-303 (332)
103 3nmw_A APC variant protein; AR 87.4 0.56 1.9E-05 50.1 5.4 94 66-160 171-272 (354)
104 1zrr_A E-2/E-2' protein; nicke 86.6 0.48 1.6E-05 46.7 4.0 55 474-552 93-147 (179)
105 1rc6_A Hypothetical protein YL 86.5 1.1 3.8E-05 45.3 6.8 45 480-552 80-124 (261)
106 4b8j_A Importin subunit alpha- 86.0 0.9 3.1E-05 49.0 6.2 92 67-160 245-337 (528)
107 4db6_A Armadillo repeat protei 86.0 0.9 3.1E-05 42.4 5.4 91 68-160 56-147 (210)
108 1sef_A Conserved hypothetical 85.8 2 6.9E-05 43.8 8.3 26 527-552 221-246 (274)
109 2cav_A Protein (canavalin); vi 85.6 0.93 3.2E-05 50.3 6.1 56 472-551 97-152 (445)
110 1rc6_A Hypothetical protein YL 85.4 0.95 3.3E-05 45.7 5.7 26 527-552 218-243 (261)
111 3st7_A Capsular polysaccharide 84.6 1.6 5.5E-05 45.2 7.1 67 461-552 273-344 (369)
112 1uij_A Beta subunit of beta co 84.3 1.1 3.8E-05 49.2 5.9 77 462-550 252-330 (416)
113 4hxt_A De novo protein OR329; 84.2 1.4 4.7E-05 41.7 5.8 89 68-158 130-219 (252)
114 1sef_A Conserved hypothetical 84.2 1.4 4.6E-05 45.1 6.2 61 464-552 67-127 (274)
115 4db8_A Armadillo-repeat protei 84.0 1.8 6.2E-05 41.5 6.7 88 70-159 16-104 (252)
116 2arc_A ARAC, arabinose operon 84.0 2 6.9E-05 38.7 6.7 25 527-551 56-80 (164)
117 1xqr_A HSPBP1 protein; armadil 83.3 2.9 9.8E-05 43.5 8.3 91 68-160 126-218 (296)
118 2ea7_A 7S globulin-1; beta bar 83.3 1.5 5.2E-05 48.4 6.5 77 462-551 269-347 (434)
119 2cav_A Protein (canavalin); vi 82.8 1.5 5.3E-05 48.6 6.3 74 462-550 284-359 (445)
120 2d5f_A Glycinin A3B4 subunit; 82.2 2.4 8.1E-05 47.8 7.6 86 462-552 48-138 (493)
121 3i3q_A Alpha-ketoglutarate-dep 82.2 11 0.00039 37.7 11.9 102 443-568 85-201 (211)
122 3avr_A Lysine-specific demethy 82.1 4.6 0.00016 46.0 9.9 105 461-580 261-380 (531)
123 2e9q_A 11S globulin subunit be 81.9 2.6 8.9E-05 47.1 7.7 84 464-552 68-152 (459)
124 1sq4_A GLXB, glyoxylate-induce 81.7 2.1 7.2E-05 44.1 6.5 48 477-552 86-133 (278)
125 2o1q_A Putative acetyl/propion 81.5 0.81 2.8E-05 42.8 3.0 57 471-553 54-111 (145)
126 1fxz_A Glycinin G1; proglycini 81.4 4.3 0.00015 45.5 9.3 86 462-552 51-138 (476)
127 3nmz_A APC variant protein; pr 81.1 1.3 4.6E-05 49.0 5.1 94 66-160 287-388 (458)
128 3nmw_A APC variant protein; AR 80.9 2.1 7.2E-05 45.6 6.3 92 66-157 214-311 (354)
129 3tpo_A Importin subunit alpha- 80.7 6.7 0.00023 42.9 10.4 77 82-159 135-212 (529)
130 1sfn_A Conserved hypothetical 80.7 3.8 0.00013 41.3 7.8 26 527-552 204-229 (246)
131 3eqe_A Putative cystein deoxyg 79.9 5.3 0.00018 38.9 8.3 63 471-552 79-142 (171)
132 3eln_A Cysteine dioxygenase ty 79.1 6.4 0.00022 39.2 8.8 65 471-551 80-146 (200)
133 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 78.5 3.6 0.00012 41.3 6.7 73 460-552 60-134 (197)
134 3nw4_A Gentisate 1,2-dioxygena 78.4 4.9 0.00017 43.8 8.3 26 527-552 317-342 (368)
135 2ozi_A Hypothetical protein RP 78.1 0.83 2.8E-05 40.3 1.8 26 528-553 60-85 (98)
136 1sfn_A Conserved hypothetical 78.1 2.7 9.1E-05 42.4 5.7 49 472-550 61-109 (246)
137 2pa7_A DTDP-6-deoxy-3,4-keto-h 77.7 11 0.00036 35.8 9.4 80 464-575 39-120 (141)
138 2iuw_A Alkylated repair protei 77.4 12 0.0004 38.0 10.3 111 439-568 105-228 (238)
139 3tt9_A Plakophilin-2; cell adh 77.3 2.1 7.1E-05 43.5 4.7 83 72-157 58-141 (233)
140 3es1_A Cupin 2, conserved barr 76.9 3 0.0001 40.8 5.5 56 468-552 87-142 (172)
141 3ejk_A DTDP sugar isomerase; Y 76.8 8.6 0.0003 37.7 8.7 76 459-552 52-131 (174)
142 3dxt_A JMJC domain-containing 76.6 6.1 0.00021 43.0 8.3 117 461-589 177-313 (354)
143 2jdq_A Importin alpha-1 subuni 76.2 7.5 0.00026 40.2 8.7 135 23-159 149-284 (450)
144 3nmz_A APC variant protein; pr 76.0 3.7 0.00013 45.5 6.6 92 66-157 330-427 (458)
145 3s7i_A Allergen ARA H 1, clone 75.4 7.1 0.00024 43.1 8.6 27 527-553 86-112 (418)
146 3uss_A Putative uncharacterize 74.6 8.7 0.0003 38.8 8.3 65 468-550 81-147 (211)
147 3ryk_A DTDP-4-dehydrorhamnose 73.7 11 0.00039 37.9 8.9 75 459-552 68-150 (205)
148 1zx5_A Mannosephosphate isomer 73.3 1.5 5.2E-05 46.1 2.6 23 527-549 158-180 (300)
149 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 72.7 16 0.00054 36.1 9.5 75 459-552 47-127 (185)
150 4hn1_A Putative 3-epimerase in 72.6 18 0.0006 36.5 9.9 78 458-553 42-125 (201)
151 2jdq_A Importin alpha-1 subuni 72.6 3 0.0001 43.1 4.6 91 66-158 276-368 (450)
152 3kgl_A Cruciferin; 11S SEED gl 72.5 9.1 0.00031 42.9 8.6 24 529-552 147-170 (466)
153 3gbg_A TCP pilus virulence reg 71.9 6.2 0.00021 39.2 6.5 64 461-550 8-72 (276)
154 2qnk_A 3-hydroxyanthranilate 3 71.9 8.8 0.0003 40.7 7.8 44 482-553 227-270 (286)
155 1qwr_A Mannose-6-phosphate iso 71.4 1.8 6.1E-05 45.9 2.6 23 527-549 158-180 (319)
156 2ixk_A DTDP-4-dehydrorhamnose 70.8 17 0.00059 35.8 9.3 75 459-552 48-128 (184)
157 3qac_A 11S globulin SEED stora 70.5 9.7 0.00033 42.7 8.3 26 527-552 130-155 (465)
158 1dzr_A DTDP-4-dehydrorhamnose 70.3 20 0.00067 35.4 9.6 75 459-552 46-127 (183)
159 1jdh_A Beta-catenin; beta-cate 70.3 5.9 0.0002 42.0 6.3 92 66-159 17-109 (529)
160 2z6h_A Catenin beta-1, beta-ca 70.0 6.1 0.00021 44.2 6.7 92 66-159 14-106 (644)
161 2phl_A Phaseolin; plant SEED s 69.8 5.1 0.00017 43.9 5.8 63 463-551 56-124 (397)
162 4b8j_A Importin subunit alpha- 69.6 5 0.00017 43.2 5.7 92 67-160 287-380 (528)
163 1xm9_A Plakophilin 1; armadill 69.4 5.8 0.0002 42.9 6.1 85 74-160 10-95 (457)
164 3ebr_A Uncharacterized RMLC-li 69.4 6.8 0.00023 37.5 5.9 55 464-550 47-101 (159)
165 1xqr_A HSPBP1 protein; armadil 68.3 5.8 0.0002 41.2 5.6 88 70-159 86-175 (296)
166 2wfp_A Mannose-6-phosphate iso 67.9 2.6 8.7E-05 46.1 2.9 23 527-549 240-262 (394)
167 3cjx_A Protein of unknown func 67.4 5.1 0.00018 38.7 4.6 58 463-551 47-104 (165)
168 3es4_A Uncharacterized protein 67.1 5.6 0.00019 36.7 4.6 63 460-551 42-104 (116)
169 1wa5_B Importin alpha subunit; 66.7 8.6 0.00029 41.6 6.7 84 73-158 264-348 (530)
170 3s7i_A Allergen ARA H 1, clone 66.6 3.8 0.00013 45.2 4.0 83 463-550 267-355 (418)
171 2q1z_B Anti-sigma factor CHRR, 66.1 12 0.00042 36.6 7.2 21 530-550 162-182 (195)
172 1wa5_B Importin alpha subunit; 66.0 4.5 0.00015 43.8 4.4 90 66-157 341-434 (530)
173 2z6h_A Catenin beta-1, beta-ca 65.5 7.2 0.00025 43.7 6.0 88 71-160 103-191 (644)
174 1sq4_A GLXB, glyoxylate-induce 65.2 14 0.00048 38.0 7.7 27 527-553 230-256 (278)
175 3l6x_A Catenin delta-1; cateni 64.0 9.1 0.00031 43.9 6.5 86 74-161 56-143 (584)
176 1upi_A DTDP-4-dehydrorhamnose 63.5 35 0.0012 34.9 10.0 75 459-552 65-146 (225)
177 3c3v_A Arachin ARAH3 isoform; 63.3 16 0.00054 41.5 8.2 24 529-552 128-151 (510)
178 3ksc_A LEGA class, prolegumin; 63.2 24 0.00084 39.8 9.7 78 472-552 57-135 (496)
179 3tt9_A Plakophilin-2; cell adh 63.2 16 0.00056 36.9 7.6 75 86-161 29-104 (233)
180 1pmi_A PMI, phosphomannose iso 62.7 3.4 0.00012 45.9 2.7 23 527-549 266-288 (440)
181 2c0z_A NOVW; isomerase, epimer 60.9 33 0.0011 34.8 9.3 75 459-552 54-135 (216)
182 1oi6_A PCZA361.16; epimerase, 60.5 26 0.0009 35.2 8.4 75 459-552 46-127 (205)
183 4e2q_A Ureidoglycine aminohydr 58.3 23 0.0008 36.8 7.9 26 527-552 225-250 (266)
184 4e2q_A Ureidoglycine aminohydr 57.9 16 0.00055 38.0 6.6 58 464-551 75-133 (266)
185 1wlt_A 176AA long hypothetical 57.8 7.1 0.00024 39.1 3.7 76 459-552 64-145 (196)
186 1jdh_A Beta-catenin; beta-cate 57.2 13 0.00046 39.3 6.0 134 23-160 59-194 (529)
187 3o14_A Anti-ecfsigma factor, C 56.2 17 0.00058 36.7 6.2 56 464-553 48-103 (223)
188 1xm9_A Plakophilin 1; armadill 55.4 11 0.00037 40.8 5.0 87 71-160 49-136 (457)
189 2lkt_A Retinoic acid receptor 53.8 7.7 0.00026 35.3 3.0 31 530-566 7-38 (125)
190 3now_A UNC-45 protein, SD10334 51.5 19 0.00067 42.8 6.7 87 71-159 628-716 (810)
191 4fdd_A Transportin-1; heat rep 50.8 56 0.0019 37.5 10.2 135 70-235 401-539 (852)
192 3opt_A DNA damage-responsive t 48.4 36 0.0012 37.3 7.6 117 461-589 220-356 (373)
193 3l6x_A Catenin delta-1; cateni 46.8 23 0.0008 40.6 6.2 89 70-160 94-183 (584)
194 1yud_A Hypothetical protein SO 45.5 9.1 0.00031 37.7 2.2 39 531-578 101-141 (170)
195 2z6g_A B-catenin; FULL-length, 45.2 21 0.00072 41.5 5.6 91 66-159 150-242 (780)
196 3now_A UNC-45 protein, SD10334 44.7 19 0.00067 42.8 5.3 91 66-157 665-756 (810)
197 4hat_C Exportin-1; heat repeat 43.9 82 0.0028 38.3 10.5 122 84-238 517-648 (1023)
198 3bal_A Acetylacetone-cleaving 43.8 21 0.00073 34.4 4.5 56 471-552 56-111 (153)
199 1dgw_Y Canavalin; duplicated s 43.8 17 0.0006 32.4 3.6 25 527-551 6-30 (93)
200 3tht_A Alkylated DNA repair pr 43.6 63 0.0022 34.7 8.6 84 441-550 177-273 (345)
201 3bb6_A Uncharacterized protein 40.2 1.1E+02 0.0039 28.8 8.6 59 474-552 27-90 (127)
202 2z6g_A B-catenin; FULL-length, 39.2 27 0.00091 40.6 5.2 94 68-161 444-540 (780)
203 3fz3_A Prunin; TREE NUT allerg 38.8 16 0.00055 41.7 3.2 25 528-552 173-197 (531)
204 3myx_A Uncharacterized protein 38.4 31 0.0011 35.4 5.0 26 527-552 83-108 (238)
205 3dl3_A Tellurite resistance pr 33.7 1.7E+02 0.0057 27.3 8.6 48 485-552 42-89 (119)
206 4dpz_X HRAS-like suppressor 2; 33.0 24 0.00082 33.5 2.9 30 530-565 7-37 (137)
207 4dot_A Group XVI phospholipase 30.8 25 0.00085 33.5 2.6 30 530-565 7-37 (140)
208 3opb_A SWI5-dependent HO expre 29.7 45 0.0016 39.7 5.1 59 101-159 448-506 (778)
209 2opw_A Phyhd1 protein; double- 29.2 1E+02 0.0035 30.9 7.0 26 525-550 226-251 (291)
210 3myx_A Uncharacterized protein 26.6 31 0.001 35.5 2.6 23 527-549 205-227 (238)
211 4gmo_A Putative uncharacterize 26.1 68 0.0023 36.7 5.6 51 70-122 80-131 (684)
212 4gmo_A Putative uncharacterize 22.9 1.8E+02 0.0062 33.2 8.3 95 70-167 36-136 (684)
213 3kmh_A D-lyxose isomerase; cup 22.7 1.2E+02 0.0043 31.4 6.2 78 471-552 116-197 (246)
214 2x1g_F Cadmus; transport prote 22.6 2.3E+02 0.008 33.0 9.3 136 67-235 506-641 (971)
215 2qjv_A Uncharacterized IOLB-li 22.4 61 0.0021 34.0 3.9 24 527-551 212-235 (270)
216 3ltm_A Alpha-REP4; protein eng 20.0 1.9E+02 0.0065 26.7 6.5 93 22-139 80-172 (211)
No 1
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=424.59 Aligned_cols=299 Identities=25% Similarity=0.323 Sum_probs=230.4
Q ss_pred hhhhHHhhhccC--CCCHHHHHHhhhccCCeeeeccCCCccccccchhhhhcccccccchhhhhhhhhhccccCCCCCch
Q 004048 281 KGRIERSIFSLN--EGCFENFIVNYWEVSPFLVRRSTDSLIEGNDIFTSFVQGLSSQESVCSFLSCIFQRHISCLPIASD 358 (776)
Q Consensus 281 ~~~v~~~lf~~~--~~s~e~Fl~~YWEKKPLLIRra~p~~~~~~~~fs~f~~~l~~~~~~~~l~~s~~~g~~s~~pi~~d 358 (776)
..+.++++|.|+ ++++++||++||||||++||++.|+ ++ . .+++.+
T Consensus 39 s~~~~~~~l~~Ll~pis~e~Fl~~yWqKkPLlIr~~~p~----------~f-----------------~-----~L~S~~ 86 (489)
T 4diq_A 39 SRRRAARLFEWLIAPMPPDHFYRRLWEREAVLVRRQDHT----------YY-----------------Q-----GLFSTA 86 (489)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHTTTTCCEEECCSCTT----------TT-----------------T-----TSCCHH
T ss_pred hHHHHHHHHHHHhCCCCHHHHHHHHHhhCcEEEecCCcc----------cc-----------------c-----CCCCHH
Confidence 566788888887 4789999999999999999999987 22 1 345778
Q ss_pred hhhhhhchhhhhhhcCCCCccccceeEEEeCCCCcccccccCCCCCCccccCCccccccChhHHHHHhhCCceEEEcCcc
Q 004048 359 ELDILSFLNDMRHKLGCPLVYEQDIRVLKTDKISKKEVHFFPRISDSFDVKDPYLIYANDISKCEEAYKEGYTIALRGME 438 (776)
Q Consensus 359 eLa~lalle~V~~~l~~p~~y~~d~Rlv~~~~~~~~E~h~~~~~~d~w~~r~Gp~~~f~d~~~l~~l~~~G~TLvL~~ld 438 (776)
+|+++..++++ .||.++++++|.++ . |...+||+. .+++++++++.+|+|+++++++
T Consensus 87 ~l~~Ll~~~~v--------~~g~~v~~~~y~~g-~------------~~~~n~~g~--~~p~~vw~ll~~G~Tl~L~~~~ 143 (489)
T 4diq_A 87 DLDSMLRNEEV--------QFGQHLDAARYING-R------------RETLNPPGR--ALPAAAWSLYQAGCSLRLLCPQ 143 (489)
T ss_dssp HHHHHHHHSCC--------BBTTTEEEEEEETT-E------------EEECCCSSB--CCHHHHHHHHHTTCEEEESCGG
T ss_pred HHHHHHHhcCc--------ccCcccceEEEeCC-e------------eEeeCCCCc--cCHHHHHHHHhCCCeEEECChh
Confidence 88888766554 68889999999873 2 334445543 4677899999999999999999
Q ss_pred cCcHHHHHHHHHHHhhhCCCcccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCC--CCCCCCCCCCCCCC
Q 004048 439 FRFECLANIADGLASLFGQPSVGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSV--QLPRLYNPCDIVNG 516 (776)
Q Consensus 439 ~~~p~LaeL~~aLe~~FG~P~v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~--~lPr~~~pf~p~~~ 516 (776)
+++|.++++++.|++.||+ .+++|+|+||+|++||++|||+||||++|+.|+|+|+||+|... .+|.... .+.
T Consensus 144 ~f~p~l~~l~~~Le~~fg~-~v~~N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~----~~~ 218 (489)
T 4diq_A 144 AFSTTVWQFLAVLQEQFGS-MAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSS----PNF 218 (489)
T ss_dssp GTCHHHHHHHHHHHHHHTS-CEEEEEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCC----CCC
T ss_pred hcChHHHHHHHHHHHHhCC-cccceEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCccc----ccC
Confidence 9999999999999999998 59999999999999999999999999999999999999987543 2443221 111
Q ss_pred cccccccccceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHHHHHHHHHHhhhhcccccc
Q 004048 517 VEAESSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEGFAHVALCCWNQAQKTHHH 596 (776)
Q Consensus 517 ~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~l~~~Al~~~~~~~~~~~~ 596 (776)
...+.+ .+..+++|+||||||||+||||++++.+++ +|+|+|||+. ++.+|.+
T Consensus 219 ~~~~~~-~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~------~SlhlTi~~~--~~~tw~d------------------ 271 (489)
T 4diq_A 219 SQDDLG-EPVLQTVLEPGDLLYFPRGFIHQAECQDGV------HSLHLTLSTY--QRNTWGD------------------ 271 (489)
T ss_dssp CGGGCC-CCSEEEEECTTCEEEECTTCEEEEEBCSSC------CEEEEEEEEC--TTCBHHH------------------
T ss_pred Cccccc-CcceEEEECCCCEEEECCCCceEEEecCCC------ceEEEeeccc--CcccHHH------------------
Confidence 122222 246899999999999999999999998754 8999999995 3456764
Q ss_pred cccccchhhhhHhHHHHHHHHHHHhcCCChhhhhhhccccC--C--CCCCChhhhhhhhHHHHHHHHHhhhccCcHHHHH
Q 004048 597 ASIESFSGILNLMSVNLLHLLIGLFGHSDPTFRKACLVGAV--S--RPSDTKDWFYLNQKTIFNELIGKISADSNFLELL 672 (776)
Q Consensus 597 ~l~~~~~~~~~~l~~~Ll~~Airl~~~~dp~~Rkac~va~~--L--pp~~~~~~l~~~~r~~F~~li~~i~~~~~~~~al 672 (776)
+.+.++..|++.++++|+++|++.|.+.. + -.++....-+......++++++++.....++.|+
T Consensus 272 ------------ll~~ll~~al~~a~~~d~~~R~~LP~~~~~~~g~~~~d~~~~~r~~~~~~~~~l~~~l~~~~~~d~a~ 339 (489)
T 4diq_A 272 ------------FLEAILPLAVQAAMEENVEFRRGLPRDFMDYMGAQHSDSKDPRRTAFMEKVRVLVARLGHFAPVDAVA 339 (489)
T ss_dssp ------------HHHHHHHHHHHHHHHHCGGGGSBCCTTGGGTCSGGGTTCCCHHHHHHHHHHHHHHHHHGGGCCHHHHH
T ss_pred ------------HHHHHHHHHHHHHHhcCHHhhccCChhHHhhcCccccCcccHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 33446667777777789999999665531 0 0011011122334456779999999999999999
Q ss_pred HHHHHH
Q 004048 673 SSMEVA 678 (776)
Q Consensus 673 ~~~~~a 678 (776)
++|.+.
T Consensus 340 d~~~k~ 345 (489)
T 4diq_A 340 DQRAKD 345 (489)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888643
No 2
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=358.80 Aligned_cols=253 Identities=28% Similarity=0.444 Sum_probs=163.2
Q ss_pred HHhhhcc--CCCCHHHHHHhhhccCCeeeeccCCCccccccchhhhhcccccccchhhhhhhhhhccccCCCCCchhhhh
Q 004048 285 ERSIFSL--NEGCFENFIVNYWEVSPFLVRRSTDSLIEGNDIFTSFVQGLSSQESVCSFLSCIFQRHISCLPIASDELDI 362 (776)
Q Consensus 285 ~~~lf~~--~~~s~e~Fl~~YWEKKPLLIRra~p~~~~~~~~fs~f~~~l~~~~~~~~l~~s~~~g~~s~~pi~~deLa~ 362 (776)
.+.+|.| .+++.++|+++||||||++||++.|+ +.. +++ ++++.++|+.
T Consensus 15 ~~~~l~~ll~~is~e~F~~~yw~kkPllIr~~~~~-------~~~-----------------~f~-----~l~s~~~L~~ 65 (442)
T 2xdv_A 15 PSSLFESLISPIKTETFFKEFWEQKPLLIQRDDPA-------LAT-----------------YYG-----SLFKLTDLKS 65 (442)
T ss_dssp HHHHHHHHTTTSCHHHHHHHTTTTSCEEECCCCHH-------HHH-----------------HHH-----HHCCHHHHSS
T ss_pred HHHHHHHHhcCCCHHHHHHHhhhhCcEEeecCCcc-------hhh-----------------hhc-----CcCCHHHHHH
Confidence 3444444 36999999999999999999998875 001 111 2345566666
Q ss_pred hhchhhhhhhcCCCCccccceeEEEeCCCCcccccccCCCCCCccccCCccccccChhHHHHHh-hCCceEEEcCcccCc
Q 004048 363 LSFLNDMRHKLGCPLVYEQDIRVLKTDKISKKEVHFFPRISDSFDVKDPYLIYANDISKCEEAY-KEGYTIALRGMEFRF 441 (776)
Q Consensus 363 lalle~V~~~l~~p~~y~~d~Rlv~~~~~~~~E~h~~~~~~d~w~~r~Gp~~~f~d~~~l~~l~-~~G~TLvL~~ld~~~ 441 (776)
++. +.+.|+.++++.++.++.. .|..+.||+. ...+.+.+ +.||||+++++++++
T Consensus 66 La~---------~~~v~~~~v~~~r~~~g~~-----------~~~~~~g~~~----~~~l~~~~~~~g~tL~l~~~~~~~ 121 (442)
T 2xdv_A 66 LCS---------RGMYYGRDVNVCRCVNGKK-----------KVLNKDGKAH----FLQLRKDFDQKRATIQFHQPQRFK 121 (442)
T ss_dssp CC-----------------------------------------------------------CCEEEETTEEEEECGGGTC
T ss_pred HHc---------cCcccccccceeeecCCcc-----------eeecCCCccC----HHHHHHHhccCCcEEEeCchhhhh
Confidence 543 2345666777776655311 1334557663 23444444 479999999999999
Q ss_pred HHHHHHHHHHHhhhCCCcccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCccccc
Q 004048 442 ECLANIADGLASLFGQPSVGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAES 521 (776)
Q Consensus 442 p~LaeL~~aLe~~FG~P~v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~ 521 (776)
|+++++++.+++.||+ .+++|+|+||+|++||++|||.||||++|+.|+|+|+||+|. .++|+... .+. .++.
T Consensus 122 p~L~~l~~~l~~~~g~-~~~~n~y~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~-~pl~~~~s----~d~-~~~~ 194 (442)
T 2xdv_A 122 DELWRIQEKLECYFGS-LVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPT-VPLAREYS----VEA-EERI 194 (442)
T ss_dssp HHHHHHHHHHHHHHTS-CCEEEEEEECTTCBCSCSEECSSEEEEEEEESCEEEEEECCS-STTCSSCE----ECC-TTTS
T ss_pred hHHHHHHHHHHHHhCC-CcccceEECCCCCCCccceECCcceEEEEEEeEEEEEEccCC-CCccccCC----CCc-hhhc
Confidence 9999999999999998 489999999999999999999999999999999999999864 34553221 111 1122
Q ss_pred ccccceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHHHHHHHHHHhhhhccccccccccc
Q 004048 522 SMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEGFAHVALCCWNQAQKTHHHASIES 601 (776)
Q Consensus 522 g~~~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~l~~~Al~~~~~~~~~~~~~l~~~ 601 (776)
+ .+..+++|+||||||||+||||++++.+.. .+|+|+|+++. ....|.+++.
T Consensus 195 ~-~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~-----~~SlhlT~~~~--~~~~w~~~l~-------------------- 246 (442)
T 2xdv_A 195 G-RPVHEFMLKPGDLLYFPRGTIHQADTPAGL-----AHSTHVTISTY--QNNSWGDFLL-------------------- 246 (442)
T ss_dssp C-SCSEEEEECTTCEEEECTTCEEEEECCSSS-----CCEEEEEEEEC--TTCSHHHHHH--------------------
T ss_pred C-CcceEEEECCCcEEEECCCceEEEEecCCC-----cceeecccccc--ccchHHHHHH--------------------
Confidence 2 245899999999999999999999998631 28999999984 2355654322
Q ss_pred chhhhhHhHHHHHHHHHHHhcCCChhhhhhhccc
Q 004048 602 FSGILNLMSVNLLHLLIGLFGHSDPTFRKACLVG 635 (776)
Q Consensus 602 ~~~~~~~l~~~Ll~~Airl~~~~dp~~Rkac~va 635 (776)
.++..++..+++.++.+|++.|.+
T Consensus 247 ----------~~~~~~l~~~~~~~~~~R~~lp~~ 270 (442)
T 2xdv_A 247 ----------DTISGLVFDTAKEDVELRTGIPRQ 270 (442)
T ss_dssp ----------HHHHHHHHHHHHHCHHHHSCCCTT
T ss_pred ----------HHHHHHHHHHHhhCHHHhcCCCcc
Confidence 233344444556889999984444
No 3
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=100.00 E-value=3.5e-36 Score=320.72 Aligned_cols=209 Identities=20% Similarity=0.392 Sum_probs=150.1
Q ss_pred CCCCHHHHHHhhhccCCeeeeccCCCccccccchhhhhcccccccchhhhhhhhhhccccCCCCCchhhhhhhchhhhhh
Q 004048 292 NEGCFENFIVNYWEVSPFLVRRSTDSLIEGNDIFTSFVQGLSSQESVCSFLSCIFQRHISCLPIASDELDILSFLNDMRH 371 (776)
Q Consensus 292 ~~~s~e~Fl~~YWEKKPLLIRra~p~~~~~~~~fs~f~~~l~~~~~~~~l~~s~~~g~~s~~pi~~deLa~lalle~V~~ 371 (776)
.++|.++|+++||+|||++||++ ++ +|. ++++.++|+.++...++
T Consensus 26 ~~is~e~F~~~yw~kkPlvir~~-~~------~~~--------------------------~l~s~~~L~~l~~~~~v-- 70 (342)
T 1vrb_A 26 SPVTMSEFLEEYWPVKPLVARGE-VE------RFT--------------------------SIPGFEKVRTLENVLAI-- 70 (342)
T ss_dssp TTSCHHHHHHHTTTTSCEEECCC-GG------GGG--------------------------GSTTCGGGSSHHHHHHH--
T ss_pred cCCCHHHHHHHHhccCCEEEcCC-cc------ccc--------------------------CCCCHHHHHHHHhhcCc--
Confidence 57999999999999999999999 75 121 23345667766666555
Q ss_pred hcCCCCccccceeEEEeCCCCcccccccCCCCCCccccCCccccccChhHHHHHhhCCceEEEcCcccCcHHHHHHHHHH
Q 004048 372 KLGCPLVYEQDIRVLKTDKISKKEVHFFPRISDSFDVKDPYLIYANDISKCEEAYKEGYTIALRGMEFRFECLANIADGL 451 (776)
Q Consensus 372 ~l~~p~~y~~d~Rlv~~~~~~~~E~h~~~~~~d~w~~r~Gp~~~f~d~~~l~~l~~~G~TLvL~~ld~~~p~LaeL~~aL 451 (776)
+..++|++. + .. .. +.|..++|+ +.+.+++.+++++||||+++++++++|.++++++.+
T Consensus 71 -------~~~~vrl~~--~-~~-----~~---~~~~~~~g~---~~~~~~~~~l~~~g~tl~v~~~~~~~p~l~~l~~~~ 129 (342)
T 1vrb_A 71 -------YNNPVMVVG--D-AV-----IE---ESEGITDRF---LVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKL 129 (342)
T ss_dssp -------CCSCEEEC------------------------CE---EECHHHHHHHHHTTCCEEECCGGGTCTHHHHHHHHH
T ss_pred -------CcCceEEeC--C-Cc-----Cc---cccccCCCc---ccCHHHHHHHHhCCCeEEECChhHhChHHHHHHHhh
Confidence 123678761 1 10 01 236556674 224567888899999999999999999999999999
Q ss_pred HhhhCCCcccce----eEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCC------CCCCC-------
Q 004048 452 ASLFGQPSVGAN----MYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYN------PCDIV------- 514 (776)
Q Consensus 452 e~~FG~P~v~aN----aYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~------pf~p~------- 514 (776)
+..+++ .+++| +|++| +++++++|||.||||++|+.|+|+|+||++|....|. +. +..+.
T Consensus 130 ~~~~~~-~~~~n~~~~~~~gp-~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l-~~~~~~~~~~~~~~~~~~~~ 206 (342)
T 1vrb_A 130 KAELRL-PAGTSSKAIVYAAK-NGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPM-QHYDLSEAPYYPDDLQSYWK 206 (342)
T ss_dssp HHHTTC-CTTCCEEEEEEEEC-SSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCS-SCEECC----CCHHHHHHCC
T ss_pred hhhcCC-cccccccceEEEeC-CCCCCCCeECChhcEEEEEEEEEEEEEecCCcccccc-Ccccccccccccccccccch
Confidence 988887 47888 99999 4788999999999999999999999999434433331 21 00010
Q ss_pred -CCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEee
Q 004048 515 -NGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLG 567 (776)
Q Consensus 515 -~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~S 567 (776)
+.+ .....+..+++|+||||||||+||||++++.+++ .|+|+|+|
T Consensus 207 ~~~p--~~~~~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~------~slsvsi~ 252 (342)
T 1vrb_A 207 GDPP--KEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQAT------LALNITFG 252 (342)
T ss_dssp SCCC--CTTCCSSEEEEECTTCEEEECTTCEEEEECSSCE------EEEEEEEC
T ss_pred hhcc--ccccCCceEEEECCCcEEEeCCCccEEEEECCCC------ceEEEEEC
Confidence 001 0111456899999999999999999999998432 79999999
No 4
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=99.87 E-value=4.4e-22 Score=194.84 Aligned_cols=92 Identities=21% Similarity=0.299 Sum_probs=66.0
Q ss_pred ccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCC--CCCCCC---CCCCCCCCcc------cccccccceE
Q 004048 460 VGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSV--QLPRLY---NPCDIVNGVE------AESSMAECRQ 528 (776)
Q Consensus 460 v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~--~lPr~~---~pf~p~~~~~------dd~g~~~~~e 528 (776)
..+|+|++|+|+ +.++|+|.+++|++|+.|+|+|+|++|... .+|... .....++... ....+++..+
T Consensus 124 ~~~~~wiG~~gs-~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~ 202 (235)
T 4gjz_A 124 ITINAWFGPQGT-ISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLS 202 (235)
T ss_dssp CEEEEEEECTTC-EEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEE
T ss_pred cceEEEEeCCCC-CceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEE
Confidence 368899999854 568999999999999999999999987432 122111 0111111110 1123345689
Q ss_pred EEEcCCcEeeeCCCCceeeeeCCC
Q 004048 529 FLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 529 vvLePGDVLYIPRGwwH~a~A~de 552 (776)
++|+|||+||||+||||+++++++
T Consensus 203 ~~l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 203 CILSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp EEECTTCEEEECTTCEEEEEESSS
T ss_pred EEECCCCEEEeCCCCcEEEEECCC
Confidence 999999999999999999999864
No 5
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=99.83 E-value=1.4e-20 Score=199.83 Aligned_cols=102 Identities=24% Similarity=0.247 Sum_probs=68.8
Q ss_pred HHHhhhCCCcc-------cceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCC--CCCC--CCCCCCCCCcc
Q 004048 450 GLASLFGQPSV-------GANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQ--LPRL--YNPCDIVNGVE 518 (776)
Q Consensus 450 aLe~~FG~P~v-------~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~--lPr~--~~pf~p~~~~~ 518 (776)
.|.+.+.+|.. ..++|++|+ +.++++|+|.+|||++|+.|+|+|+|++|.... +|.. .......+...
T Consensus 150 ~L~~d~~~P~~~~~d~~~~s~l~~g~~-g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~ 228 (338)
T 3al5_A 150 LLKGDIKFPEFFKEEQFFSSVFRISSP-GLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDL 228 (338)
T ss_dssp HHHTTCCCCCCSCGGGEEEEEEEEECT-TCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCT
T ss_pred HHHHhcCCCccccccccccceeEECCC-CCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcch
Confidence 45555666421 247889998 557899999999999999999999999864321 1100 00000000000
Q ss_pred ---cccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 519 ---AESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 519 ---dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
.....+...+++|+|||+||||+||||++++.+.
T Consensus 229 ~~~p~~~~~~~~~~~L~pGD~LyiP~gWwH~v~~l~~ 265 (338)
T 3al5_A 229 AKYPLFSKARRYECSLEAGDVLFIPALWFHNVISEEF 265 (338)
T ss_dssp TTCTTGGGCCEEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred hhCcccccCCCEEEEECCCCEEEECCCCeEEEeeCCC
Confidence 1122234689999999999999999999999864
No 6
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=99.59 E-value=2e-15 Score=161.30 Aligned_cols=91 Identities=18% Similarity=0.205 Sum_probs=63.8
Q ss_pred cceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCC--CCCCC-C---CCCCCCCCcc------cccccccceE
Q 004048 461 GANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSV--QLPRL-Y---NPCDIVNGVE------AESSMAECRQ 528 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~--~lPr~-~---~pf~p~~~~~------dd~g~~~~~e 528 (776)
..++|++|+|+ +.++|+|.++||++|+.|+|+|+|++|... .+|.. . .....++... .....+...+
T Consensus 184 ~~~l~iG~~gs-~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~ 262 (349)
T 3d8c_A 184 SNLLLIGMEGN-VTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYE 262 (349)
T ss_dssp ECEEEEECTTC-EEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEE
T ss_pred cceEEEECCCC-CccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEE
Confidence 35699999955 569999999999999999999999987431 11110 0 0001111100 0122234689
Q ss_pred EEEcCCcEeeeCCCCceeeeeCCC
Q 004048 529 FLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 529 vvLePGDVLYIPRGwwH~a~A~de 552 (776)
++|+|||+||||+||||++++.++
T Consensus 263 ~~l~pGD~LyiP~gWwH~V~~l~d 286 (349)
T 3d8c_A 263 TVVGPGDVLYIPMYWWHHIESLLN 286 (349)
T ss_dssp EEECTTCEEEECTTCEEEEEECTT
T ss_pred EEECCCCEEEECCCCcEEEEEcCC
Confidence 999999999999999999999873
No 7
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=99.36 E-value=5.4e-13 Score=142.63 Aligned_cols=105 Identities=15% Similarity=0.295 Sum_probs=72.8
Q ss_pred cceeEEcCCCCCcccccccCCC--eEEEEEeeeEEEEEecCCCCCCCCCCCCC---------CCC-----CCcccc----
Q 004048 461 GANMYLTPPNSQGLASHYDDHC--VFVCQLFGTKQWKIFAQPSVQLPRLYNPC---------DIV-----NGVEAE---- 520 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~D--VFVlQL~GrKrWrL~~pp~~~lPr~~~pf---------~p~-----~~~~dd---- 520 (776)
..|+|++|+| .+.+.|+|.++ ++.+|+.|+|+|.+++|.. . +.+|... +.+ ..+...
T Consensus 173 ~~~~~~G~~g-s~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~-~-~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~ 249 (336)
T 3k2o_A 173 YRWFVMGPPR-SGTGIHIDPLGTSAWNALVQGHKRWCLFPTST-P-RELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTW 249 (336)
T ss_dssp CEEEEEECTT-CEEEEECCGGGCEEEEEEEESCEEEEEECTTS-C-HHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTS
T ss_pred ceEEEECCCC-ccCCcccCCCccceeeEEEeeeEEEEEeCCCc-c-hhcccCcccccCCCccchhhhhhhhCcchhhhcc
Confidence 5789999985 57799999987 6999999999999998643 2 1111100 000 000000
Q ss_pred cccccceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHH
Q 004048 521 SSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEG 578 (776)
Q Consensus 521 ~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~ 578 (776)
.....+.+++|+|||+||||+||||++.+.+++ + +++++|.++.....
T Consensus 250 p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~s--------i--sv~~~f~~~~nl~~ 297 (336)
T 3k2o_A 250 PPEFKPLEILQKPGETVFVPGGWWHVVLNLDTT--------I--AITQNFASSTNFPV 297 (336)
T ss_dssp CGGGCCEEEEECTTCEEEECTTCEEEEEESSCE--------E--EEEEEECCTTTHHH
T ss_pred cccCceEEEEECCCCEEEeCCCCcEEEecCCCe--------E--EEEcccCCcccHHH
Confidence 012356899999999999999999999998753 3 56666677765544
No 8
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=99.12 E-value=5.1e-11 Score=131.99 Aligned_cols=107 Identities=21% Similarity=0.261 Sum_probs=73.3
Q ss_pred CcccceeEEcCCCCCcccccccCCC--eEEEEEeeeEEEEEecCCCCCCCCCC-----CCCCCCCCcccccccccceEEE
Q 004048 458 PSVGANMYLTPPNSQGLASHYDDHC--VFVCQLFGTKQWKIFAQPSVQLPRLY-----NPCDIVNGVEAESSMAECRQFL 530 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~~D--VFVlQL~GrKrWrL~~pp~~~lPr~~-----~pf~p~~~~~dd~g~~~~~evv 530 (776)
|.++.++|++|+| .+.+.|+|.+. ++..|+.|+|+|.++||....+ ..| .+...... ..+. ...+.+++
T Consensus 194 P~~~r~~~mGp~g-S~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~-~~y~~~~~s~~q~~~~-~p~~-~~~~~~v~ 269 (451)
T 2yu1_A 194 PKVQKYCLMSVRG-CYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNL-ELYENWLLSGSQGDIF-LGDR-VSDCQRIE 269 (451)
T ss_dssp CCCCCEEEEECTT-CEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHH-HHHHHHHHTTCCSSSC-HHHH-SSCCEEEE
T ss_pred CchheEEEEccCC-CCCCeEECCCCcchhhheecceEEEEEeCCCcccc-cccccccccccchhhh-hccc-cccceEEE
Confidence 6666789999995 57899999976 7899999999999998743211 001 00000000 0111 12468999
Q ss_pred EcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHH
Q 004048 531 LREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEG 578 (776)
Q Consensus 531 LePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~ 578 (776)
++|||+||||.||||++.+.+++ |+|+.+|-+...-..
T Consensus 270 l~pGE~LfIPsGWwH~V~nleds----------Iait~NF~~~~nl~~ 307 (451)
T 2yu1_A 270 LKQGYTFVIPSGWIHAVYTPTDT----------LVFGGNFLHSFNIPM 307 (451)
T ss_dssp ECTTCEEEECTTCEEEEECSSCE----------EEEEEEECCSSSHHH
T ss_pred ECCCcEEEeCCCceEEEecCCCe----------EEEeeeeCCcccHHH
Confidence 99999999999999999998763 355556665555443
No 9
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.12 E-value=3.3e-11 Score=134.66 Aligned_cols=109 Identities=18% Similarity=0.312 Sum_probs=72.1
Q ss_pred CcccceeEEcCCCCCcccccccCCCe--EEEEEeeeEEEEEecCCCCCCCCCCCCCCC-CCCcccc--cccccceEEEEc
Q 004048 458 PSVGANMYLTPPNSQGLASHYDDHCV--FVCQLFGTKQWKIFAQPSVQLPRLYNPCDI-VNGVEAE--SSMAECRQFLLR 532 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~~DV--FVlQL~GrKrWrL~~pp~~~lPr~~~pf~p-~~~~~dd--~g~~~~~evvLe 532 (776)
|.+.-.+|++|+| .+...|+|.+.+ +..|+.|+|+|.++||....+ ..|..+.. ....... .....+.+++|+
T Consensus 264 P~~~r~~~mG~~g-S~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (488)
T 3kv5_D 264 PFVQKYCLMGVQD-SYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENL-ARYESWSSSVTQSEVFFGDKVDKCYKCVVK 341 (488)
T ss_dssp CCCSCEEEEECTT-CEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHH-HHHHHHHTCSSGGGSCGGGSSSCCEEEEEE
T ss_pred cccceEEEEcCCC-CCCCeEECCCCCceeeeccCeeEEEEEeCCccccc-ccccccccCCccchhhhcccccceEEEeeC
Confidence 5566679999994 578999999987 669999999999998743211 11110000 0000000 111246899999
Q ss_pred CCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHH
Q 004048 533 EGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEG 578 (776)
Q Consensus 533 PGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~ 578 (776)
|||+||||.||||++.+.++ |+ .|+-+|-.......
T Consensus 342 pGe~lfIPsGWwH~V~nled--------sI--ai~~NF~~~~nl~~ 377 (488)
T 3kv5_D 342 QGHTLFVPTGWIHAVLTSQD--------CM--AFGGNFLHNLNIGM 377 (488)
T ss_dssp TTCEEEECTTCEEEEEEEEE--------EE--EEEEEECCSTTHHH
T ss_pred CCCEEEeCCCceEEeeCCCC--------eE--EEccccCCccCHHH
Confidence 99999999999999999865 22 44455555555443
No 10
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=99.11 E-value=6.8e-11 Score=128.16 Aligned_cols=108 Identities=21% Similarity=0.298 Sum_probs=73.1
Q ss_pred CcccceeEEcCCCCCcccccccCCCe--EEEEEeeeEEEEEecCCCCCCCCCCCCCCC-CCCccccc--ccccceEEEEc
Q 004048 458 PSVGANMYLTPPNSQGLASHYDDHCV--FVCQLFGTKQWKIFAQPSVQLPRLYNPCDI-VNGVEAES--SMAECRQFLLR 532 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~~DV--FVlQL~GrKrWrL~~pp~~~lPr~~~pf~p-~~~~~dd~--g~~~~~evvLe 532 (776)
|.+.-.+|++|+ +.+.+.|+|.+.. +..|+.|+|+|.++||....+ ..|..+.. .+....-. ....+.+++++
T Consensus 145 P~~~r~l~mGp~-gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl-~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~ 222 (371)
T 3k3o_A 145 PNVQKYCLMSVR-DSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANL-TLFECWSSSSNQNEMFFGDQVDKCYKCSVK 222 (371)
T ss_dssp CCCSCEEEEECT-TEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHH-HHHHHHHTSTTGGGSCGGGTSSCCEEEEEE
T ss_pred CCceeEEEEcCC-CCCCCeEECCCCCceeEEEeeeEEEEEEECCCcccc-ccccccccCCccchhhcccccCceEEEEEC
Confidence 766779999999 5578999999886 679999999999998743221 01110000 00000001 12356999999
Q ss_pred CCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHH
Q 004048 533 EGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWE 577 (776)
Q Consensus 533 PGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We 577 (776)
|||+||||.||||++.+.+++ |+|+-+|-....-.
T Consensus 223 pGEtLfIPsGWwH~V~nledS----------Iai~~NFl~~~nl~ 257 (371)
T 3k3o_A 223 QGQTLFIPTGWIHAVLTPVDC----------LAFGGNFLHSLNIE 257 (371)
T ss_dssp TTCEEEECTTCEEEEEEEEEE----------EEEEEEECCSTTHH
T ss_pred CCcEEEeCCCCeEEEecCCCe----------EEECCcccchhhHH
Confidence 999999999999999998653 35555665555444
No 11
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=99.06 E-value=7.4e-11 Score=128.87 Aligned_cols=108 Identities=19% Similarity=0.310 Sum_probs=72.2
Q ss_pred CcccceeEEcCCCCCcccccccCCCe--EEEEEeeeEEEEEecCCCCCCCCCCCCCC-CCCCccccc--ccccceEEEEc
Q 004048 458 PSVGANMYLTPPNSQGLASHYDDHCV--FVCQLFGTKQWKIFAQPSVQLPRLYNPCD-IVNGVEAES--SMAECRQFLLR 532 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~~DV--FVlQL~GrKrWrL~~pp~~~lPr~~~pf~-p~~~~~dd~--g~~~~~evvLe 532 (776)
|.+.-.+|++|+ +.+.+.|+|.... +..|+.|+|+|.++||....+ ..|..+. ..+...... ....+.+++|+
T Consensus 173 P~v~r~l~mGp~-gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl-~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~ 250 (397)
T 3kv9_A 173 PFVQKYCLMGVQ-DSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENL-ARYESWSSSVTQSEVFFGDKVDKCYKCVVK 250 (397)
T ss_dssp CCCSCEEEEECT-TCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHH-HHHHHHHTSGGGGGSCGGGGSSCCEEEEEE
T ss_pred ccceeEEEEcCC-CCCCCEEECCCCCceeeeecCceEEEEEeCCccccc-ccccccccCCCcchhhhccccCceEEEEEC
Confidence 556678999998 4567999999876 779999999999998743221 1111100 000000001 11356899999
Q ss_pred CCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHH
Q 004048 533 EGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWE 577 (776)
Q Consensus 533 PGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We 577 (776)
|||+||||.||||++.+.++ | |.|+-+|-.+..-.
T Consensus 251 pGe~lfIPsGW~H~V~nled--------S--Iai~~NFl~~~nl~ 285 (397)
T 3kv9_A 251 QGHTLFVPTGWIHAVLTSQD--------C--MAFGGNFLHNLNIG 285 (397)
T ss_dssp TTCEEEECTTCEEEEEEEEE--------E--EEEEEEECCSTTHH
T ss_pred CCCEEEeCCCCeEEccCCcC--------e--EEECCcccCchhHH
Confidence 99999999999999999865 2 24455665555544
No 12
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.01 E-value=2.4e-10 Score=126.61 Aligned_cols=106 Identities=20% Similarity=0.282 Sum_probs=72.5
Q ss_pred CcccceeEEcCCCCCcccccccCCCe--EEEEEeeeEEEEEecCCCCCCCCCCCCCC---C--CCCcccccccccceEEE
Q 004048 458 PSVGANMYLTPPNSQGLASHYDDHCV--FVCQLFGTKQWKIFAQPSVQLPRLYNPCD---I--VNGVEAESSMAECRQFL 530 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~~DV--FVlQL~GrKrWrL~~pp~~~lPr~~~pf~---p--~~~~~dd~g~~~~~evv 530 (776)
|.+.-.+|++|+ +.+...|+|.+.. +..|+.|+|+|.++||....+. .+..+. . .....+ ....+.+++
T Consensus 229 P~v~r~~~mG~~-gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~-~~~~~~~s~~~~~~~~~~--~~~~~~~v~ 304 (447)
T 3kv4_A 229 PNVQKYCLMSVR-DSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLT-LFECWSSSSNQNEMFFGD--QVDKCYKCS 304 (447)
T ss_dssp CCCSCEEEEECT-TEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHH-HHHHHHTCSSGGGSCGGG--GSSCCEEEE
T ss_pred CCceeEEEEeCC-CCCCCeeECCCCCceeEEEeeeEEEEEEeCCCccccc-chhhcccCcchhhhhccc--cccceEEEE
Confidence 767888999999 4577999999886 6799999999999987432110 010000 0 000001 123468999
Q ss_pred EcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHH
Q 004048 531 LREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWE 577 (776)
Q Consensus 531 LePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We 577 (776)
++|||+||||.||||++.+.+++ |.|+-+|-....-.
T Consensus 305 l~pGetlfIPsGWwH~V~nleds----------Iai~~NF~~~~nl~ 341 (447)
T 3kv4_A 305 VKQGQTLFIPTGWIHAVLTPVDC----------LAFGGNFLHSLNIE 341 (447)
T ss_dssp EETTCEEEECTTCEEEEEESSCE----------EEEEEEECCSTTHH
T ss_pred ECCCcEEecCCCCeEEEecCCCE----------EEEccccccccCHH
Confidence 99999999999999999999763 25555555544433
No 13
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=98.95 E-value=8.5e-10 Score=120.36 Aligned_cols=92 Identities=21% Similarity=0.344 Sum_probs=65.3
Q ss_pred CcccceeEEcCCCCCcccccccCCC--eEEEEEeeeEEEEEecCCCCCCCCCCCCCC--C--CCCcccccccccceEEEE
Q 004048 458 PSVGANMYLTPPNSQGLASHYDDHC--VFVCQLFGTKQWKIFAQPSVQLPRLYNPCD--I--VNGVEAESSMAECRQFLL 531 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~~D--VFVlQL~GrKrWrL~~pp~~~lPr~~~pf~--p--~~~~~dd~g~~~~~evvL 531 (776)
|.+.-.+|++|+| .+...|+|... ++..++.|+|+|.++||....+. .|..+. + ......+ ....+.++++
T Consensus 172 P~v~r~~~mGp~g-S~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~-~y~~~~~s~~~~e~~~~~-~~~~~~ev~l 248 (392)
T 3pua_A 172 PKVTKYCLICVKD-SYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANIS-LYERWRSASNHSEMFFAD-QVDKCYKCIV 248 (392)
T ss_dssp CSCSCEEEEECTT-CEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHH-HHHHHHHSTTGGGSCGGG-GSSCCEEEEE
T ss_pred CCceeEEEEeCCC-CCCCEeECCCCCceeeeeccceEEEEEECCCccccc-chhhcccCcchhhhhhcc-cccceEEEEE
Confidence 7678889999994 57899999974 68999999999999987432210 010000 0 0000001 1135689999
Q ss_pred cCCcEeeeCCCCceeeeeCCC
Q 004048 532 REGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 532 ePGDVLYIPRGwwH~a~A~de 552 (776)
+|||+||||.||||++.+.++
T Consensus 249 ~pGEtlfIPsGWwH~V~nled 269 (392)
T 3pua_A 249 KQGQTLFIPSGWIYATLTPVD 269 (392)
T ss_dssp ETTCEEEECTTCEEEEEEEEE
T ss_pred CCCcEEeeCCCceEEEecCCC
Confidence 999999999999999999875
No 14
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.66 E-value=1.8e-08 Score=113.30 Aligned_cols=92 Identities=23% Similarity=0.266 Sum_probs=63.7
Q ss_pred CcccceeEEcCCCCCcccccccCCC--eEEEEEeeeEEEEEecCCCCCCCCCCCCC----CCCCCcccccccccceEEEE
Q 004048 458 PSVGANMYLTPPNSQGLASHYDDHC--VFVCQLFGTKQWKIFAQPSVQLPRLYNPC----DIVNGVEAESSMAECRQFLL 531 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~~D--VFVlQL~GrKrWrL~~pp~~~lPr~~~pf----~p~~~~~dd~g~~~~~evvL 531 (776)
|.+.--++++|. +.+...|+|... ++..++.|+|+|.++||....+. .|..+ .......+ .-...+.++++
T Consensus 294 P~v~rf~lmg~~-gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~-~y~~w~~s~~~~~wfgd-~l~~~~~~v~l 370 (528)
T 3pur_A 294 PKVEQFCLAGMA-GSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFA-AYQAHETSPDTTTWFGD-IANGAVKRVVI 370 (528)
T ss_dssp CCCSSEEEEECT-TEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHH-HHHHHHHSSCCSCCGGG-GTTTCCEEEEE
T ss_pred CCeeEEEEEeCC-CCCCCeeECCCCCceeEEEecceEEEEEeCCCccchh-hhhhhccCCchhhhhcc-cccccEEEEEE
Confidence 556667899998 456799999865 68999999999999987432210 11000 00000011 11123578999
Q ss_pred cCCcEeeeCCCCceeeeeCCC
Q 004048 532 REGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 532 ePGDVLYIPRGwwH~a~A~de 552 (776)
+|||+||||.||||++.+.++
T Consensus 371 ~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 371 KEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp ETTCEEEECTTCEEEEEEEEE
T ss_pred CCCCEEEecCCceEEEecCCC
Confidence 999999999999999999865
No 15
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=96.11 E-value=0.035 Score=51.82 Aligned_cols=74 Identities=18% Similarity=0.250 Sum_probs=52.3
Q ss_pred HHhhhCCCcccceeEEcCCCCCccccccc-CCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEE
Q 004048 451 LASLFGQPSVGANMYLTPPNSQGLASHYD-DHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQF 529 (776)
Q Consensus 451 Le~~FG~P~v~aNaYlTPpg~qGf~pHyD-~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~ev 529 (776)
|....|.....+....-+||+.+.++|+- ..+-++.-+.|+=...+.. .+.
T Consensus 37 l~~~~g~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~----------------------------~~~ 88 (162)
T 3l2h_A 37 LGDAVGLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEN----------------------------DQY 88 (162)
T ss_dssp HHHHHTCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETT----------------------------EEE
T ss_pred ccCCCCCCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECC----------------------------EEE
Confidence 33346654445555555665546789987 6677777788877666431 456
Q ss_pred EEcCCcEeeeCCC-CceeeeeCCC
Q 004048 530 LLREGDILYIPRG-FSHEACTEDD 552 (776)
Q Consensus 530 vLePGDVLYIPRG-wwH~a~A~de 552 (776)
+|+|||++|+|+| .+|.....++
T Consensus 89 ~l~~Gd~i~i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 89 PIAPGDFVGFPCHAAAHSISNDGT 112 (162)
T ss_dssp EECTTCEEEECTTSCCEEEECCSS
T ss_pred EeCCCCEEEECCCCceEEeEeCCC
Confidence 9999999999998 9999988654
No 16
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=96.10 E-value=0.017 Score=50.35 Aligned_cols=56 Identities=20% Similarity=0.306 Sum_probs=45.0
Q ss_pred CCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceee
Q 004048 468 PPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEA 547 (776)
Q Consensus 468 Ppg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a 547 (776)
++ ++.+++|+.+.+-+++-+.|+-...+.. ..++|+|||++|+|+|..|..
T Consensus 48 ~~-g~~~~~H~H~~~e~~~vl~G~~~~~~~~----------------------------~~~~l~~Gd~~~ip~~~~H~~ 98 (115)
T 1yhf_A 48 DK-GQEIGRHSSPGDAMVTILSGLAEITIDQ----------------------------ETYRVAEGQTIVMPAGIPHAL 98 (115)
T ss_dssp CT-TCEEEEECCSSEEEEEEEESEEEEEETT----------------------------EEEEEETTCEEEECTTSCEEE
T ss_pred CC-CCccCCEECCCcEEEEEEeCEEEEEECC----------------------------EEEEECCCCEEEECCCCCEEE
Confidence 44 3567889988888999999987766521 345899999999999999999
Q ss_pred eeCCC
Q 004048 548 CTEDD 552 (776)
Q Consensus 548 ~A~de 552 (776)
.+.++
T Consensus 99 ~~~~~ 103 (115)
T 1yhf_A 99 YAVEA 103 (115)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 98754
No 17
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=95.97 E-value=0.023 Score=50.70 Aligned_cols=56 Identities=23% Similarity=0.297 Sum_probs=46.0
Q ss_pred CCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceee
Q 004048 468 PPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEA 547 (776)
Q Consensus 468 Ppg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a 547 (776)
++ ++.+++|+-..+-++.-+.|+=+..+.. ..++|+|||.+|||+|..|..
T Consensus 44 ~~-G~~~~~H~H~~~e~~~Vl~G~~~~~i~~----------------------------~~~~l~~Gd~i~ip~~~~H~~ 94 (114)
T 3fjs_A 44 PA-GKQVGSHSVAGPSTIQCLEGEVEIGVDG----------------------------AQRRLHQGDLLYLGAGAAHDV 94 (114)
T ss_dssp CT-TCEEEEECCSSCEEEEEEESCEEEEETT----------------------------EEEEECTTEEEEECTTCCEEE
T ss_pred CC-CCccCceeCCCcEEEEEEECEEEEEECC----------------------------EEEEECCCCEEEECCCCcEEE
Confidence 45 4568899999899999999987766532 346999999999999999999
Q ss_pred eeCCC
Q 004048 548 CTEDD 552 (776)
Q Consensus 548 ~A~de 552 (776)
.+.++
T Consensus 95 ~~~~~ 99 (114)
T 3fjs_A 95 NAITN 99 (114)
T ss_dssp EESSS
T ss_pred EeCCC
Confidence 99865
No 18
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=95.80 E-value=0.032 Score=49.45 Aligned_cols=63 Identities=22% Similarity=0.225 Sum_probs=43.2
Q ss_pred ceeEEcCCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeC
Q 004048 462 ANMYLTPPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIP 540 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIP 540 (776)
+..+.-+| ++.+++|+-.. +-++.-+.|+=+..+.. . ....|+|||++|+|
T Consensus 41 ~~~~~~~p-g~~~~~H~H~~~~e~~~Vl~G~~~~~~~~--~-------------------------~~~~l~~Gd~~~i~ 92 (125)
T 3h8u_A 41 VVVWHAHP-GQEIASHVHPHGQDTWTVISGEAEYHQGN--G-------------------------IVTHLKAGDIAIAK 92 (125)
T ss_dssp EEEEEECT-TCEECCC-CTTCEEEEEEEECEEEEECST--T-------------------------CEEEEETTEEEEEC
T ss_pred EEEEEECC-CCcCCcccCCCCeEEEEEEEeEEEEEECC--C-------------------------eEEEeCCCCEEEEC
Confidence 33333345 45688998885 55666777876654411 0 34589999999999
Q ss_pred CCCceeeeeCCC
Q 004048 541 RGFSHEACTEDD 552 (776)
Q Consensus 541 RGwwH~a~A~de 552 (776)
+|.+|...+.++
T Consensus 93 ~~~~H~~~n~~~ 104 (125)
T 3h8u_A 93 PGQVHGAMNSGP 104 (125)
T ss_dssp TTCCCEEEECSS
T ss_pred CCCEEEeEeCCC
Confidence 999999998754
No 19
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=95.78 E-value=0.035 Score=46.45 Aligned_cols=56 Identities=21% Similarity=0.241 Sum_probs=41.4
Q ss_pred CCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCcee
Q 004048 468 PPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHE 546 (776)
Q Consensus 468 Ppg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~ 546 (776)
++ +..+++|+-. .+-++.-+.|+=+..+.. ....|+|||++|+|+|.+|.
T Consensus 36 ~p-g~~~~~H~H~~~~e~~~v~~G~~~~~~~~----------------------------~~~~l~~Gd~~~ip~~~~H~ 86 (105)
T 1v70_A 36 LP-GQAQKVHVHEGSDKVYYALEGEVVVRVGE----------------------------EEALLAPGMAAFAPAGAPHG 86 (105)
T ss_dssp CT-TCEEEEECCSSCEEEEEEEESCEEEEETT----------------------------EEEEECTTCEEEECTTSCEE
T ss_pred CC-CCcCCccCCCCCcEEEEEEeCEEEEEECC----------------------------EEEEeCCCCEEEECCCCcEE
Confidence 44 3457889855 455777788876665421 34589999999999999999
Q ss_pred eeeCCC
Q 004048 547 ACTEDD 552 (776)
Q Consensus 547 a~A~de 552 (776)
..+.++
T Consensus 87 ~~~~~~ 92 (105)
T 1v70_A 87 VRNESA 92 (105)
T ss_dssp EECCSS
T ss_pred eEeCCC
Confidence 988654
No 20
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=95.65 E-value=0.032 Score=48.77 Aligned_cols=53 Identities=13% Similarity=0.073 Sum_probs=43.2
Q ss_pred CCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 471 SQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 471 ~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
+..+++|+-..+-|+.-+.|+=...+.. ...+|+|||++|+|+|..|...+.
T Consensus 48 g~~~~~H~h~~~e~~~vl~G~~~~~i~~----------------------------~~~~l~~Gd~i~i~~~~~H~~~~~ 99 (114)
T 2ozj_A 48 GESVSEEEYFGDTLYLILQGEAVITFDD----------------------------QKIDLVPEDVLMVPAHKIHAIAGK 99 (114)
T ss_dssp TSSCCCBCCSSCEEEEEEEEEEEEEETT----------------------------EEEEECTTCEEEECTTCCBEEEEE
T ss_pred CCccccEECCCCeEEEEEeCEEEEEECC----------------------------EEEEecCCCEEEECCCCcEEEEeC
Confidence 3567889988888999999987766532 345899999999999999999886
Q ss_pred C
Q 004048 551 D 551 (776)
Q Consensus 551 d 551 (776)
+
T Consensus 100 ~ 100 (114)
T 2ozj_A 100 G 100 (114)
T ss_dssp E
T ss_pred C
Confidence 4
No 21
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=95.62 E-value=0.023 Score=51.80 Aligned_cols=62 Identities=16% Similarity=0.180 Sum_probs=46.7
Q ss_pred ccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 460 VGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 460 v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
..+..|--++ +..+..|+ .+|=+++-++|+=+..+.. ...+|+|||++||
T Consensus 40 ~~~~~~~~~p-G~~~~~H~-~~~E~~~Vl~G~~~~~~~g----------------------------~~~~l~~GD~v~i 89 (119)
T 3lwc_A 40 ITIGYGRYAP-GQSLTETM-AVDDVMIVLEGRLSVSTDG----------------------------ETVTAGPGEIVYM 89 (119)
T ss_dssp CEEEEEEECT-TCEEEEEC-SSEEEEEEEEEEEEEEETT----------------------------EEEEECTTCEEEE
T ss_pred EEEEEEEECC-CCCcCccC-CCCEEEEEEeCEEEEEECC----------------------------EEEEECCCCEEEE
Confidence 4555555555 35678898 6777888889988877621 3458999999999
Q ss_pred CCCCceeeeeCC
Q 004048 540 PRGFSHEACTED 551 (776)
Q Consensus 540 PRGwwH~a~A~d 551 (776)
|+|..|...+.+
T Consensus 90 p~g~~H~~~~~~ 101 (119)
T 3lwc_A 90 PKGETVTIRSHE 101 (119)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCEEEEEcCC
Confidence 999999987753
No 22
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=95.41 E-value=0.064 Score=47.47 Aligned_cols=62 Identities=29% Similarity=0.280 Sum_probs=47.2
Q ss_pred ceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCC
Q 004048 462 ANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPR 541 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPR 541 (776)
+..+.-++ +..+++|+-..+-+++-+.|+=+..+.. ...+|.|||++|+|+
T Consensus 43 ~~~~~~~p-g~~~~~H~H~~~e~~~vl~G~~~~~~~~----------------------------~~~~l~~Gd~~~ip~ 93 (126)
T 4e2g_A 43 LNWVRIEP-NTEMPAHEHPHEQAGVMLEGTLELTIGE----------------------------ETRVLRPGMAYTIPG 93 (126)
T ss_dssp EEEEEECT-TCEEEEECCSSEEEEEEEEECEEEEETT----------------------------EEEEECTTEEEEECT
T ss_pred EEEEEECC-CCcCCCccCCCceEEEEEEeEEEEEECC----------------------------EEEEeCCCCEEEECC
Confidence 33333345 3457899988888888999987776532 345899999999999
Q ss_pred CCceeeeeCCC
Q 004048 542 GFSHEACTEDD 552 (776)
Q Consensus 542 GwwH~a~A~de 552 (776)
|.+|...+.++
T Consensus 94 ~~~H~~~~~~~ 104 (126)
T 4e2g_A 94 GVRHRARTFED 104 (126)
T ss_dssp TCCEEEECCTT
T ss_pred CCcEEeEECCC
Confidence 99999998754
No 23
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=95.26 E-value=0.036 Score=48.72 Aligned_cols=53 Identities=17% Similarity=0.321 Sum_probs=42.1
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEE-EEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQF-LLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~ev-vLePGDVLYIPRGwwH~a~A~ 550 (776)
..+++|+-..+-++.-+.|+=+..+.. ... +|+|||++|+|+|.+|...+.
T Consensus 38 ~~~~~H~H~~~e~~~Vl~G~~~~~i~~----------------------------~~~~~l~~Gd~i~ip~~~~H~~~~~ 89 (117)
T 2b8m_A 38 EQMPKHYSNSYVHLIIIKGEMTLTLED----------------------------QEPHNYKEGNIVYVPFNVKMLIQNI 89 (117)
T ss_dssp CBCCCEECSSCEEEEEEESEEEEEETT----------------------------SCCEEEETTCEEEECTTCEEEEECC
T ss_pred CcCCCEeCCCcEEEEEEeCEEEEEECC----------------------------EEEEEeCCCCEEEECCCCcEEeEcC
Confidence 457889988888888889987776632 123 789999999999999999886
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 90 ~~ 91 (117)
T 2b8m_A 90 NS 91 (117)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 24
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=95.24 E-value=0.03 Score=55.87 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=46.2
Q ss_pred CCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 471 SQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 471 ~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
++.+++|.-+++.++.-++|+=+..+.. .+.+|+|||++|+|+|..|...+.
T Consensus 47 G~~~~~h~h~~~~~~~Vl~G~~~~~i~~----------------------------~~~~l~~Gd~~~~p~~~~H~~~a~ 98 (227)
T 3rns_A 47 DEEITAEAMLGNRYYYCFNGNGEIFIEN----------------------------NKKTISNGDFLEITANHNYSIEAR 98 (227)
T ss_dssp TCEEEECSCSSCEEEEEEESEEEEEESS----------------------------CEEEEETTEEEEECSSCCEEEEES
T ss_pred CCccCccccCCCEEEEEEeCEEEEEECC----------------------------EEEEECCCCEEEECCCCCEEEEEC
Confidence 5678999889999999999998777642 345899999999999999999997
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 99 ~~ 100 (227)
T 3rns_A 99 DN 100 (227)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 25
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=95.16 E-value=0.054 Score=47.12 Aligned_cols=53 Identities=17% Similarity=0.174 Sum_probs=42.5
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
..+++|+-..+-++.-+.|+=...+.. ...+|.|||++|+|+|.+|...+.+
T Consensus 45 ~~~~~H~H~~~e~~~vl~G~~~~~~~~----------------------------~~~~l~~Gd~~~ip~~~~H~~~~~~ 96 (116)
T 2pfw_A 45 AEGYVHAHRHSQVSYVVEGEFHVNVDG----------------------------VIKVLTAGDSFFVPPHVDHGAVCPT 96 (116)
T ss_dssp EEEEEECCSSEEEEEEEEECEEEEETT----------------------------EEEEECTTCEEEECTTCCEEEEESS
T ss_pred CcCCcEECCcceEEEEEeeEEEEEECC----------------------------EEEEeCCCCEEEECcCCceeeEeCC
Confidence 447889888887888888987666521 3468999999999999999999875
Q ss_pred C
Q 004048 552 D 552 (776)
Q Consensus 552 e 552 (776)
+
T Consensus 97 ~ 97 (116)
T 2pfw_A 97 G 97 (116)
T ss_dssp C
T ss_pred C
Confidence 4
No 26
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=95.16 E-value=0.049 Score=48.95 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=42.6
Q ss_pred EcCCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCc
Q 004048 466 LTPPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFS 544 (776)
Q Consensus 466 lTPpg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGww 544 (776)
+.++.+...++|+-.. +-++.-+.|+=+..+... ...+|+|||++|||+|.+
T Consensus 48 ~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~~---------------------------~~~~l~~Gd~~~ip~g~~ 100 (134)
T 2o8q_A 48 AIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYEDI---------------------------GAVMLEAGGSAFQPPGVR 100 (134)
T ss_dssp ECC-----CCCEEECCSCEEEEEEESEEEEEETTT---------------------------EEEEEETTCEEECCTTCC
T ss_pred EecCCCCCCCCEECCCCcEEEEEEeCEEEEEECCc---------------------------EEEEecCCCEEEECCCCc
Confidence 3433245678998876 778888999887766320 345899999999999999
Q ss_pred eeeeeCCC
Q 004048 545 HEACTEDD 552 (776)
Q Consensus 545 H~a~A~de 552 (776)
|...+.++
T Consensus 101 H~~~~~~~ 108 (134)
T 2o8q_A 101 HRELRHSD 108 (134)
T ss_dssp EEEEEECT
T ss_pred EEeEeCCC
Confidence 99988543
No 27
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=95.10 E-value=0.049 Score=46.57 Aligned_cols=56 Identities=18% Similarity=0.225 Sum_probs=41.2
Q ss_pred CCCCCccccc--ccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCc
Q 004048 468 PPNSQGLASH--YDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFS 544 (776)
Q Consensus 468 Ppg~qGf~pH--yD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGww 544 (776)
++ +..+++| +.. .+-++.-+.|+=+.++.. ...+|+|||++|||+|.+
T Consensus 29 ~p-g~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~----------------------------~~~~l~~Gd~~~i~~~~~ 79 (113)
T 2gu9_A 29 AP-GDREGGPDNRHRGADQWLFVVDGAGEAIVDG----------------------------HTQALQAGSLIAIERGQA 79 (113)
T ss_dssp CT-TCEEECCCSSSCCCEEEEEEEECCEEEEETT----------------------------EEEEECTTEEEEECTTCC
T ss_pred CC-CCccCCcccccCCCcEEEEEEeCEEEEEECC----------------------------EEEEeCCCCEEEECCCCc
Confidence 44 3456777 654 566777788887776521 345899999999999999
Q ss_pred eeeeeCCC
Q 004048 545 HEACTEDD 552 (776)
Q Consensus 545 H~a~A~de 552 (776)
|...+.++
T Consensus 80 H~~~~~~~ 87 (113)
T 2gu9_A 80 HEIRNTGD 87 (113)
T ss_dssp EEEECCSS
T ss_pred EEeEcCCC
Confidence 99988654
No 28
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=95.06 E-value=0.11 Score=46.02 Aligned_cols=57 Identities=18% Similarity=0.316 Sum_probs=45.6
Q ss_pred cCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCcee
Q 004048 467 TPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHE 546 (776)
Q Consensus 467 TPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~ 546 (776)
-++ +..+++|+-+..-++.-+.|+-+..+.. ....|+|||+++||+|..|.
T Consensus 41 ~~p-g~~~~~H~H~~~Ei~~v~~G~~~~~i~~----------------------------~~~~l~~Gd~~~i~~~~~H~ 91 (128)
T 4i4a_A 41 VRP-ETKSFRHSHNEYELFIVIQGNAIIRIND----------------------------EDFPVTKGDLIIIPLDSEHH 91 (128)
T ss_dssp ECT-TEECCCBCCSSEEEEEEEESEEEEEETT----------------------------EEEEEETTCEEEECTTCCEE
T ss_pred ECC-CCccCCEecCCeEEEEEEeCEEEEEECC----------------------------EEEEECCCcEEEECCCCcEE
Confidence 345 3467899988888888999988877632 34689999999999999999
Q ss_pred eeeCCC
Q 004048 547 ACTEDD 552 (776)
Q Consensus 547 a~A~de 552 (776)
..+.++
T Consensus 92 ~~~~~~ 97 (128)
T 4i4a_A 92 VINNNQ 97 (128)
T ss_dssp EEECSS
T ss_pred eEeCCC
Confidence 988644
No 29
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=94.95 E-value=0.032 Score=50.21 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=45.5
Q ss_pred cceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeC
Q 004048 461 GANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIP 540 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIP 540 (776)
.+..+.-++ ++.+++|+-...-++.-+.|+=+....-. . ...+|+|||++|+|
T Consensus 40 ~~~~~~~~p-g~~~~~H~H~~~e~~~vl~G~~~~~~~~~-~-------------------------~~~~l~~Gd~~~ip 92 (145)
T 3ht1_A 40 VLTEFEVSP-NGSTPPHFHEWEHEIYVLEGSMGLVLPDQ-G-------------------------RTEEVGPGEAIFIP 92 (145)
T ss_dssp EEEEEEEEE-EEECCCEECSSCEEEEEEEECEEEEEGGG-T-------------------------EEEEECTTCEEEEC
T ss_pred EEEEEEECC-CCcCCCccCCCceEEEEEEeEEEEEEeEC-C-------------------------EEEEECCCCEEEEC
Confidence 343333345 34578999887766677888766652111 0 45689999999999
Q ss_pred CCCceeeeeCCC
Q 004048 541 RGFSHEACTEDD 552 (776)
Q Consensus 541 RGwwH~a~A~de 552 (776)
+|.+|...+.++
T Consensus 93 ~~~~H~~~~~~~ 104 (145)
T 3ht1_A 93 RGEPHGFVTGPG 104 (145)
T ss_dssp TTCCBEEECCTT
T ss_pred CCCeEEeEcCCC
Confidence 999999988754
No 30
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=94.75 E-value=0.092 Score=46.69 Aligned_cols=63 Identities=19% Similarity=0.207 Sum_probs=41.9
Q ss_pred cceeEEcCCCCCccc-ccccCCCeEEE-EEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEee
Q 004048 461 GANMYLTPPNSQGLA-SHYDDHCVFVC-QLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILY 538 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~-pHyD~~DVFVl-QL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLY 538 (776)
.+....-+++ ..++ +|+-...-+++ -+.|+=...+.. ....|+|||+++
T Consensus 27 ~~~~~~~~pg-~~~~~~H~H~~~e~~~~vl~G~~~~~i~~----------------------------~~~~l~~Gd~i~ 77 (125)
T 3cew_A 27 EVSINHLPAG-AGVPFVHSHKQNEEIYGILSGKGFITIDG----------------------------EKIELQAGDWLR 77 (125)
T ss_dssp EEEEEEECTT-CBCSSEEEESSEEEEEEEEEEEEEEEETT----------------------------EEEEEETTEEEE
T ss_pred EEEEEEECCC-CCCCCCccCCCceEEEEEEeCEEEEEECC----------------------------EEEEeCCCCEEE
Confidence 3443333553 4566 78877543333 667766555421 446899999999
Q ss_pred eCCCCceeeeeCCC
Q 004048 539 IPRGFSHEACTEDD 552 (776)
Q Consensus 539 IPRGwwH~a~A~de 552 (776)
||+|.+|...+.++
T Consensus 78 i~~~~~H~~~~~~~ 91 (125)
T 3cew_A 78 IAPDGKRQISAASD 91 (125)
T ss_dssp ECTTCCEEEEEBTT
T ss_pred ECCCCcEEEEcCCC
Confidence 99999999988643
No 31
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=94.74 E-value=0.044 Score=53.01 Aligned_cols=63 Identities=21% Similarity=0.232 Sum_probs=45.4
Q ss_pred eEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCC
Q 004048 464 MYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGF 543 (776)
Q Consensus 464 aYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGw 543 (776)
+.+.|. +...||+-..+-++.-+.|+=+..+..+.. ....+|++||++|+|+|+
T Consensus 46 ~~l~pg--~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~------------------------~~~~~l~~GDv~~~P~g~ 99 (178)
T 1dgw_A 46 YCSKPN--TLLLPHHSDSDLLVLVLEGQAILVLVNPDG------------------------RDTYKLDQGDAIKIQAGT 99 (178)
T ss_dssp EEECTT--EEEEEEEESSEEEEEEEESEEEEEEEETTE------------------------EEEEEEETTEEEEECTTC
T ss_pred EEecCC--cEecCcCCCCCEEEEEEeEEEEEEEEeCCC------------------------cEEEEECCCCEEEECCCC
Confidence 344443 446888555566666788888888765311 145699999999999999
Q ss_pred ceeeeeCCC
Q 004048 544 SHEACTEDD 552 (776)
Q Consensus 544 wH~a~A~de 552 (776)
+|.....++
T Consensus 100 ~H~~~N~g~ 108 (178)
T 1dgw_A 100 PFYLINPDN 108 (178)
T ss_dssp CEEEEECCS
T ss_pred eEEEEeCCC
Confidence 999999765
No 32
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=94.56 E-value=0.11 Score=49.76 Aligned_cols=61 Identities=16% Similarity=0.115 Sum_probs=46.2
Q ss_pred ceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCC
Q 004048 462 ANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPR 541 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPR 541 (776)
+..+.-+|| +..++|+-.++-++.-+.|+=...+.. ...+|+|||++|||+
T Consensus 58 ~~~~~l~pG-~~~~~H~H~~~E~~~Vl~G~~~~~i~~----------------------------~~~~l~~Gd~i~ip~ 108 (167)
T 3ibm_A 58 TRYFEVEPG-GYTTLERHEHTHVVMVVRGHAEVVLDD----------------------------RVEPLTPLDCVYIAP 108 (167)
T ss_dssp EEEEEECTT-CBCCCBBCSSCEEEEEEESEEEEEETT----------------------------EEEEECTTCEEEECT
T ss_pred EEEEEECCC-CCCCCccCCCcEEEEEEeCEEEEEECC----------------------------EEEEECCCCEEEECC
Confidence 333333553 457899988888888888887665532 356899999999999
Q ss_pred CCceeeeeCC
Q 004048 542 GFSHEACTED 551 (776)
Q Consensus 542 GwwH~a~A~d 551 (776)
|.+|...+.+
T Consensus 109 ~~~H~~~n~~ 118 (167)
T 3ibm_A 109 HAWHQIHATG 118 (167)
T ss_dssp TCCEEEEEES
T ss_pred CCcEEEEeCC
Confidence 9999998865
No 33
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=94.53 E-value=0.13 Score=48.86 Aligned_cols=53 Identities=17% Similarity=0.073 Sum_probs=42.8
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
+..++|+....-++.-+.|+=+.++.. ...+|+|||++|||+|.+|...+.+
T Consensus 55 ~~~~~H~H~~~E~~~Vl~G~~~v~v~g----------------------------~~~~l~~Gd~i~ip~~~~H~~~n~g 106 (156)
T 3kgz_A 55 GYSTLERHAHVHAVMIHRGHGQCLVGE----------------------------TISDVAQGDLVFIPPMTWHQFRANR 106 (156)
T ss_dssp EECCCBBCSSCEEEEEEEEEEEEEETT----------------------------EEEEEETTCEEEECTTCCEEEECCS
T ss_pred CccCceeCCCcEEEEEEeCEEEEEECC----------------------------EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 456889988887888888887776532 3458999999999999999998865
Q ss_pred C
Q 004048 552 D 552 (776)
Q Consensus 552 e 552 (776)
+
T Consensus 107 ~ 107 (156)
T 3kgz_A 107 G 107 (156)
T ss_dssp S
T ss_pred C
Confidence 4
No 34
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=94.41 E-value=0.11 Score=44.48 Aligned_cols=57 Identities=18% Similarity=0.148 Sum_probs=40.2
Q ss_pred CCCCCcccccccCC--CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCce
Q 004048 468 PPNSQGLASHYDDH--CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSH 545 (776)
Q Consensus 468 Ppg~qGf~pHyD~~--DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH 545 (776)
++ +..+++|+-.+ +++++-+.|+=+..+.. + ....|+|||++|+|+|..|
T Consensus 41 ~~-g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~-----------------------~----~~~~l~~Gd~~~ip~~~~H 92 (110)
T 2q30_A 41 KA-GQELPVHSHNIEGELNIVVLEGEGEFVGDG-----------------------D----AVIPAPRGAVLVAPISTPH 92 (110)
T ss_dssp CT-TCEEEEECCSSSCEEEEEEEESCEEEECGG-----------------------G----CEEEECTTEEEEEETTSCE
T ss_pred CC-CCcCCcccCCCCccEEEEEEeCEEEEEeCC-----------------------C----EEEEECCCCEEEeCCCCcE
Confidence 44 34578888663 44467778876655421 0 3458999999999999999
Q ss_pred eeeeCCC
Q 004048 546 EACTEDD 552 (776)
Q Consensus 546 ~a~A~de 552 (776)
...+.++
T Consensus 93 ~~~~~~~ 99 (110)
T 2q30_A 93 GVRAVTD 99 (110)
T ss_dssp EEEESSS
T ss_pred EEEEcCC
Confidence 9988754
No 35
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=94.19 E-value=0.12 Score=47.88 Aligned_cols=63 Identities=11% Similarity=0.016 Sum_probs=45.3
Q ss_pred cCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCce
Q 004048 467 TPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSH 545 (776)
Q Consensus 467 TPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH 545 (776)
-+| +..+++|+-. .+-++.-+.|+=+..+..... . ...+++|.|||++|||+|.+|
T Consensus 50 l~p-g~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~-~---------------------~~~~~~l~~Gd~i~ip~g~~H 106 (148)
T 2oa2_A 50 IQV-GEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQD-N---------------------LHFQEEVFDDYAILIPAGTWH 106 (148)
T ss_dssp ECT-TCBCCCBCCTTCEEEEEEEESEEEEEEESBTT-B---------------------CCEEEEEETTCEEEECTTCEE
T ss_pred ECC-CCccCceECCCCcEEEEEEeCEEEEEECCccc-c---------------------ceeeEEECCCCEEEECCCCcE
Confidence 345 3457888876 446777788988888764210 0 014579999999999999999
Q ss_pred eeeeCCC
Q 004048 546 EACTEDD 552 (776)
Q Consensus 546 ~a~A~de 552 (776)
...+.++
T Consensus 107 ~~~n~~~ 113 (148)
T 2oa2_A 107 NVRNTGN 113 (148)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 9998754
No 36
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=94.03 E-value=0.081 Score=44.58 Aligned_cols=51 Identities=20% Similarity=0.319 Sum_probs=37.5
Q ss_pred cccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 473 GLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 473 Gf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
.+++|+.+. +-+++-+.|+-...+.. ..++|+|||+++||+|.+|...+.+
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~~~----------------------------~~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAFRD----------------------------QNITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEECSS----------------------------CEEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEECC----------------------------EEEEEcCCCEEEECCCCeEeeEcCC
Confidence 367777665 66777777765444321 3458999999999999999998864
No 37
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=94.01 E-value=0.29 Score=45.67 Aligned_cols=65 Identities=14% Similarity=0.145 Sum_probs=47.7
Q ss_pred cCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCcee
Q 004048 467 TPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHE 546 (776)
Q Consensus 467 TPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~ 546 (776)
-++| +.+++|+-..+-++.-+.|+=+..+.... .. +. + ....++|+|||++|||+|.+|.
T Consensus 48 ~~pg-~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~-~~-------~~---------~--~~~~~~l~~Gd~i~ip~~~~H~ 107 (163)
T 1lr5_A 48 ISPG-QRTPIHRHSCEEVFTVLKGKGTLLMGSSS-LK-------YP---------G--QPQEIPFFQNTTFSIPVNDPHQ 107 (163)
T ss_dssp ECTT-CBCCEEEESSCEEEEEEECCEEEEECCSS-SS-------SC---------C--SCEEEEECTTEEEEECTTCCEE
T ss_pred ECCC-CcCCCeECCCCeEEEEEeCEEEEEECCcc-cc-------cc---------C--ccEEEEeCCCCEEEECCCCcEE
Confidence 3453 45788988888788889999888876521 10 00 0 1256799999999999999999
Q ss_pred eeeCC
Q 004048 547 ACTED 551 (776)
Q Consensus 547 a~A~d 551 (776)
..+.+
T Consensus 108 ~~n~~ 112 (163)
T 1lr5_A 108 VWNSD 112 (163)
T ss_dssp EECCC
T ss_pred eEeCC
Confidence 98865
No 38
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=93.83 E-value=0.22 Score=47.27 Aligned_cols=70 Identities=21% Similarity=0.223 Sum_probs=49.8
Q ss_pred hCCCcccceeEEcCCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC
Q 004048 455 FGQPSVGANMYLTPPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE 533 (776)
Q Consensus 455 FG~P~v~aNaYlTPpg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP 533 (776)
.+.....+....-++|+...++|+-.. +-++.-++|+=..++.. .+++|+|
T Consensus 38 ~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~----------------------------~~~~l~~ 89 (163)
T 3i7d_A 38 GGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQ----------------------------GEHPMVP 89 (163)
T ss_dssp TTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETT----------------------------EEEEECT
T ss_pred CCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECC----------------------------EEEEeCC
Confidence 443334555555566554557898776 67777788877665532 4569999
Q ss_pred CcEeeeCCC--CceeeeeCCC
Q 004048 534 GDILYIPRG--FSHEACTEDD 552 (776)
Q Consensus 534 GDVLYIPRG--wwH~a~A~de 552 (776)
||++|+|+| ..|.....++
T Consensus 90 GD~i~ip~~~~~~H~~~n~~~ 110 (163)
T 3i7d_A 90 GDCAAFPAGDPNGHQFVNRTD 110 (163)
T ss_dssp TCEEEECTTCCCCBEEECCSS
T ss_pred CCEEEECCCCCcceEEEECCC
Confidence 999999999 9999988654
No 39
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=93.67 E-value=0.14 Score=53.71 Aligned_cols=64 Identities=17% Similarity=0.284 Sum_probs=47.6
Q ss_pred eEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCC
Q 004048 464 MYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRG 542 (776)
Q Consensus 464 aYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG 542 (776)
+.+.|. ....+|+.. .+-++.-+.|+=+.++..+.. .....+|++||++|||+|
T Consensus 57 ~~l~pg--~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g-----------------------~~~~~~l~~GD~~~ip~g 111 (361)
T 2vqa_A 57 MSLEPG--AIRELHWHANAAEWAYVMEGRTRITLTSPEG-----------------------KVEIADVDKGGLWYFPRG 111 (361)
T ss_dssp EEECTT--CEEEEEECTTCCEEEEEEESEEEEEEECTTS-----------------------CEEEEEEETTEEEEECTT
T ss_pred EEEcCC--CCCCceeCCCCCEEEEEEEeEEEEEEEeCCC-----------------------cEEEEEEcCCCEEEECCC
Confidence 444443 356789887 777777799998888875311 013469999999999999
Q ss_pred CceeeeeCCC
Q 004048 543 FSHEACTEDD 552 (776)
Q Consensus 543 wwH~a~A~de 552 (776)
++|...+.++
T Consensus 112 ~~H~~~n~~~ 121 (361)
T 2vqa_A 112 WGHSIEGIGP 121 (361)
T ss_dssp CEEEEEECSS
T ss_pred CeEEEEeCCC
Confidence 9999998753
No 40
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=93.64 E-value=0.12 Score=58.79 Aligned_cols=66 Identities=8% Similarity=0.147 Sum_probs=49.3
Q ss_pred cceeEEcCCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
-+.+.+.|. +-.+|||-.. +-++.-+.|+=+..+..+... ...+.+|+||||+||
T Consensus 396 ~a~v~L~pG--gm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~----------------------~v~~~~L~~GDV~v~ 451 (531)
T 3fz3_A 396 AERGFFYRN--GIYSPHWNVNAHSVVYVIRGNARVQVVNENGD----------------------AILDQEVQQGQLFIV 451 (531)
T ss_dssp EEEEEECTT--CEEEEEEESSCCEEEEEEEEEEEEEEECTTSC----------------------EEEEEEEETTCEEEE
T ss_pred EEEEEeecC--ccccceEcCCCCEEEEEEeCcEEEEEEeCCCc----------------------EEEEEEecCCeEEEE
Confidence 466788775 4578999774 667777889888888763110 125679999999999
Q ss_pred CCCCceeeeeC
Q 004048 540 PRGFSHEACTE 550 (776)
Q Consensus 540 PRGwwH~a~A~ 550 (776)
|+|++|...+.
T Consensus 452 P~G~~H~~~ag 462 (531)
T 3fz3_A 452 PQNHGVIQQAG 462 (531)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCeEEEecC
Confidence 99999987654
No 41
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=93.62 E-value=0.17 Score=45.10 Aligned_cols=24 Identities=29% Similarity=0.457 Sum_probs=21.6
Q ss_pred EEEcCCcEeeeCCCCceeeeeCCC
Q 004048 529 FLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 529 vvLePGDVLYIPRGwwH~a~A~de 552 (776)
..|+|||.+|||+|..|.....++
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 489999999999999999988754
No 42
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=93.48 E-value=0.21 Score=48.69 Aligned_cols=56 Identities=14% Similarity=0.328 Sum_probs=42.1
Q ss_pred ccccccCC---CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 474 LASHYDDH---CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 474 f~pHyD~~---DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
.++|+-.+ +-++.-++|+=...+..... .+....|+|||++|||+|++|.....
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g-----------------------~~~~~~l~~GD~v~ip~g~~H~~~N~ 142 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEG-----------------------DAKWISMEPGTVVYVPPYWAHRTVNI 142 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTC-----------------------CEEEEEECTTCEEEECTTCEEEEEEC
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCC-----------------------cEEEEEECCCcEEEECCCCeEEEEEC
Confidence 67888764 46666788888888764210 12557999999999999999999987
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 143 g~ 144 (190)
T 1x82_A 143 GD 144 (190)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 43
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=93.37 E-value=0.23 Score=49.23 Aligned_cols=55 Identities=24% Similarity=0.331 Sum_probs=43.7
Q ss_pred cccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 473 GLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 473 Gf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
-+..|+++.|-+..|+.|+=.-++... + ...+++|++||+..+|+|..|..++.+
T Consensus 47 r~d~H~h~~dE~FyvlkG~m~i~v~d~----------------------g--~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 47 RTDYHDDPLEEFFYQLRGNAYLNLWVD----------------------G--RRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CCCEEECSSCEEEEEEESCEEEEEEET----------------------T--EEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CccCcCCCCceEEEEEeeEEEEEEEcC----------------------C--ceeeEEECCCCEEEeCCCCCcCccccC
Confidence 377888888888888888877776541 0 015679999999999999999998765
No 44
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=93.36 E-value=0.27 Score=47.32 Aligned_cols=53 Identities=17% Similarity=-0.001 Sum_probs=41.0
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
+..++|+-...-++.-+.|+=+..+.. ...+|+|||++|||+|.+|...+.+
T Consensus 64 ~~~~~H~H~~~E~~~Vl~G~~~~~v~g----------------------------~~~~l~~GD~i~ip~g~~H~~~n~~ 115 (166)
T 3jzv_A 64 GHSTLERHQHAHGVMILKGRGHAMVGR----------------------------AVSAVAPYDLVTIPGWSWHQFRAPA 115 (166)
T ss_dssp EECCCBBCSSCEEEEEEEECEEEEETT----------------------------EEEEECTTCEEEECTTCCEEEECCT
T ss_pred CccCceeCCCcEEEEEEeCEEEEEECC----------------------------EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 456889888777777777776655421 4569999999999999999998764
Q ss_pred C
Q 004048 552 D 552 (776)
Q Consensus 552 e 552 (776)
+
T Consensus 116 ~ 116 (166)
T 3jzv_A 116 D 116 (166)
T ss_dssp T
T ss_pred C
Confidence 4
No 45
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=93.31 E-value=0.35 Score=44.91 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=42.2
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceE-EEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQ-FLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~e-vvLePGDVLYIPRGwwH~a~A~ 550 (776)
..+++|+-...-+++-+.|+=+..+.. .. .+|+|||++|+|+|.+|...+.
T Consensus 59 ~~~~~H~H~~~E~~~Vl~G~~~~~~~~----------------------------~~~~~l~~Gd~i~ip~~~~H~~~n~ 110 (147)
T 2f4p_A 59 ARTHWHSHPGGQILIVTRGKGFYQERG----------------------------KPARILKKGDVVEIPPNVVHWHGAA 110 (147)
T ss_dssp CEECSEECTTCEEEEEEEEEEEEEETT----------------------------SCCEEEETTCEEEECTTCCEEEEEB
T ss_pred CccCceECCCceEEEEEeCEEEEEECC----------------------------EEEEEECCCCEEEECCCCcEEeEeC
Confidence 456889988888888889987776532 12 4899999999999999999887
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 111 ~~ 112 (147)
T 2f4p_A 111 PD 112 (147)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 46
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=93.29 E-value=0.088 Score=47.29 Aligned_cols=53 Identities=13% Similarity=0.014 Sum_probs=41.3
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
..+++|+-+..-++.-+.|+=+..+.. ...+|+|||++|+|+|.+|...+.+
T Consensus 59 ~~~~~H~H~~~e~~~Vl~G~~~~~i~~----------------------------~~~~l~~Gd~i~ip~g~~H~~~~~~ 110 (126)
T 1vj2_A 59 GLIDRHSHPWEHEIFVLKGKLTVLKEQ----------------------------GEETVEEGFYIFVEPNEIHGFRNDT 110 (126)
T ss_dssp EEEEEECCSSCEEEEEEESEEEEECSS----------------------------CEEEEETTEEEEECTTCCEEEECCS
T ss_pred CcCCceeCCCcEEEEEEEeEEEEEECC----------------------------EEEEECCCCEEEECCCCcEEeEeCC
Confidence 456789888877888888876655421 3458999999999999999998865
Q ss_pred C
Q 004048 552 D 552 (776)
Q Consensus 552 e 552 (776)
+
T Consensus 111 ~ 111 (126)
T 1vj2_A 111 D 111 (126)
T ss_dssp S
T ss_pred C
Confidence 4
No 47
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=93.26 E-value=0.035 Score=48.85 Aligned_cols=26 Identities=19% Similarity=0.229 Sum_probs=22.4
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
.+..|.+||..|+|.|.+|.....++
T Consensus 59 ~~~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 59 SLAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp ECCCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEEEecCCcEEEEcCCCcEECEECCC
Confidence 34578999999999999999998765
No 48
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=93.21 E-value=0.14 Score=48.93 Aligned_cols=50 Identities=12% Similarity=0.066 Sum_probs=38.9
Q ss_pred cccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 475 ASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 475 ~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
.+|+...+-|+.-+.|+=...+.. ...+|+|||.+|+|+|..|...+.++
T Consensus 120 ~~H~h~~~E~~~Vl~G~~~~~~~~----------------------------~~~~l~~GD~i~i~~~~~H~~~n~~~ 169 (192)
T 1y9q_A 120 SPHALGVIEYIHVLEGIMKVFFDE----------------------------QWHELQQGEHIRFFSDQPHGYAAVTE 169 (192)
T ss_dssp CCCSTTCEEEEEEEESCEEEEETT----------------------------EEEEECTTCEEEEECSSSEEEEESSS
T ss_pred CCCCCCCEEEEEEEEeEEEEEECC----------------------------EEEEeCCCCEEEEcCCCCeEeECCCC
Confidence 367766667777788877665521 44599999999999999999999765
No 49
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=93.20 E-value=0.25 Score=49.13 Aligned_cols=53 Identities=17% Similarity=0.371 Sum_probs=38.1
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeee-C
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACT-E 550 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A-~ 550 (776)
+.+++|.-.++-++.-+.|+=+.++.. ....|+|||.+|+|+|..|...+ .
T Consensus 164 ~~~~~H~H~~~e~~~Vl~G~~~~~i~g----------------------------~~~~l~~Gd~i~ip~~~~H~~~~~~ 215 (227)
T 3rns_A 164 ESLDPHKAPGDALVTVLDGEGKYYVDG----------------------------KPFIVKKGESAVLPANIPHAVEAET 215 (227)
T ss_dssp CEEEEECCSSEEEEEEEEEEEEEEETT----------------------------EEEEEETTEEEEECTTSCEEEECCS
T ss_pred CccCCEECCCcEEEEEEeEEEEEEECC----------------------------EEEEECCCCEEEECCCCcEEEEeCC
Confidence 445666666666666666665544421 45699999999999999999998 6
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 216 ~~ 217 (227)
T 3rns_A 216 EN 217 (227)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 50
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=93.09 E-value=0.23 Score=55.63 Aligned_cols=66 Identities=18% Similarity=0.203 Sum_probs=48.3
Q ss_pred cceeEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
-+.+.+.|. +.++|||-. .+-++.-+.|+=+..+..+... ...+.+|+|||++||
T Consensus 340 ~~~v~l~pG--a~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~----------------------~~~~~~l~~GDv~vi 395 (476)
T 1fxz_A 340 AEFGSLRKN--AMFVPHYNLNANSIIYALNGRALIQVVNCNGE----------------------RVFDGELQEGRVLIV 395 (476)
T ss_dssp EEEEEECTT--CEEEEEEETTCCEEEEEEESEEEEEEECTTSC----------------------EEEEEEEETTCEEEE
T ss_pred EEEEEecCC--ceecceECCCCCEEEEEEeCEEEEEEEecCCC----------------------EEeeeEEcCCCEEEE
Confidence 345666654 368999988 4567777888888887753110 124557999999999
Q ss_pred CCCCceeeeeC
Q 004048 540 PRGFSHEACTE 550 (776)
Q Consensus 540 PRGwwH~a~A~ 550 (776)
|+|++|...+.
T Consensus 396 P~G~~H~~~ng 406 (476)
T 1fxz_A 396 PQNFVVAARSQ 406 (476)
T ss_dssp CTTCEEEEEEC
T ss_pred CCCCeEEEEeC
Confidence 99999999983
No 51
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=92.78 E-value=0.16 Score=45.20 Aligned_cols=59 Identities=14% Similarity=0.244 Sum_probs=40.9
Q ss_pred eeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCC
Q 004048 463 NMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRG 542 (776)
Q Consensus 463 NaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG 542 (776)
.+|-.+++ .+..|.+. +-++.-++|+=+.++.. . ...+|+|||++|+|+|
T Consensus 34 ~~~~~~pg--~~~~hH~~-~E~~~Vl~G~~~~~i~~--g-------------------------~~~~l~~GD~i~ip~g 83 (101)
T 1o5u_A 34 PIWEKEVS--EFDWYYDT-NETCYILEGKVEVTTED--G-------------------------KKYVIEKGDLVTFPKG 83 (101)
T ss_dssp CEEEECSE--EEEEECSS-CEEEEEEEEEEEEEETT--C-------------------------CEEEEETTCEEEECTT
T ss_pred EEEEeCCC--cccccCCc-eEEEEEEeCEEEEEECC--C-------------------------CEEEECCCCEEEECCC
Confidence 34555552 35567554 45666688887776631 0 3458999999999999
Q ss_pred CceeeeeCC
Q 004048 543 FSHEACTED 551 (776)
Q Consensus 543 wwH~a~A~d 551 (776)
..|...+.+
T Consensus 84 ~~H~~~n~~ 92 (101)
T 1o5u_A 84 LRCRWKVLE 92 (101)
T ss_dssp CEEEEEEEE
T ss_pred CcEEEEeCC
Confidence 999988754
No 52
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=92.73 E-value=0.17 Score=57.31 Aligned_cols=66 Identities=17% Similarity=0.257 Sum_probs=48.8
Q ss_pred cceeEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
-+.+.+.|. +..+|||-. .+-++.-+.|+=+..+..+.. . ...+.+|+|||++||
T Consensus 374 ~a~v~L~PG--~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G---------------------~-~~~~~~l~~GDv~vi 429 (510)
T 3c3v_A 374 AEYGNLYRN--ALFVPHYNTNAHSIIYALRGRAHVQVVDSNG---------------------N-RVYDEELQEGHVLVV 429 (510)
T ss_dssp EEEEEEETT--CEEEEEEESSCCEEEEEEESEEEEEEECTTS---------------------C-EEEEEEEETTCEEEE
T ss_pred EEEEEecCC--ceecceECCCCCEEEEEEeCEEEEEEEeCCC---------------------C-EEEeEEEcCCcEEEE
Confidence 455667665 367999987 456777888988888775311 0 124557999999999
Q ss_pred CCCCceeeeeC
Q 004048 540 PRGFSHEACTE 550 (776)
Q Consensus 540 PRGwwH~a~A~ 550 (776)
|+|++|...+.
T Consensus 430 P~G~~H~~~Ng 440 (510)
T 3c3v_A 430 PQNFAVAGKSQ 440 (510)
T ss_dssp CTTCEEEEEEC
T ss_pred CCCCeEEEEeC
Confidence 99999999983
No 53
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=92.70 E-value=0.25 Score=48.30 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=44.8
Q ss_pred CcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
+..++|+-.. +-++.-++|+=+..+.... +. +. .....+|+|||++|||+|.+|.....
T Consensus 83 ~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~----~~---------------~~-~~~~~~l~~GD~~~iP~g~~H~~~N~ 142 (201)
T 1fi2_A 83 GTNPPHIHPRATEIGMVMKGELLVGILGSL----DS---------------GN-KLYSRVVRAGETFVIPRGLMHFQFNV 142 (201)
T ss_dssp CEEEEEECTTCCEEEEEEESEEEEEEECCG----GG---------------TT-CEEEEEEETTCEEEECTTCCEEEEEC
T ss_pred CCCCCeECCCCCEEEEEEeCEEEEEEEcCC----CC---------------CC-eEEEEEECCCCEEEECCCCeEEEEeC
Confidence 3578999884 6788888998888776421 00 00 01367999999999999999999887
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 143 g~ 144 (201)
T 1fi2_A 143 GK 144 (201)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 54
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=92.66 E-value=0.2 Score=56.32 Aligned_cols=67 Identities=13% Similarity=0.161 Sum_probs=48.2
Q ss_pred cceeEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
-+.+.+.|. +.++|||-. .+-++.-+.|+=+..+..+... ...+.+|+|||++||
T Consensus 369 ~a~v~l~pG--~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~----------------------~~~~~~l~~GDv~vv 424 (493)
T 2d5f_A 369 AQYVVLYRN--GIYSPHWNLNANSVIYVTRGKGRVRVVNAQGN----------------------AVFDGELRRGQLLVV 424 (493)
T ss_dssp EEEEEECTT--CEEEEEEESSCCEEEEEEEEEEEEEEECTTSC----------------------EEEEEEEETTCEEEE
T ss_pred EEEEEccCC--ceeeeeECCCCCEEEEEEeceEEEEEEcCCCC----------------------EEEeEEEcCCCEEEE
Confidence 345666664 468999977 4567777888888887753110 124568999999999
Q ss_pred CCCCceeeeeCC
Q 004048 540 PRGFSHEACTED 551 (776)
Q Consensus 540 PRGwwH~a~A~d 551 (776)
|+|++|...+.+
T Consensus 425 P~G~~H~~~n~~ 436 (493)
T 2d5f_A 425 PQNFVVAEQGGE 436 (493)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCeEeeeeCC
Confidence 999999988743
No 55
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=92.53 E-value=0.19 Score=56.35 Aligned_cols=67 Identities=12% Similarity=0.145 Sum_probs=50.3
Q ss_pred cceeEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
-+.+.++|. +-..|||-. -+-++.-+.|+=+..+..+... ...+.+|++|||+||
T Consensus 325 ~a~v~L~pG--gm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~----------------------~~f~~~l~~GDV~v~ 380 (466)
T 3kgl_A 325 ALRGSIRQN--AMVLPQWNANANAVLYVTDGEAHVQVVNDNGD----------------------RVFDGQVSQGQLLSI 380 (466)
T ss_dssp EEEEEEETT--EEEEEEEESSCCEEEEEEESEEEEEEECTTSC----------------------EEEEEEEETTCEEEE
T ss_pred eEEEEeecC--cEeeeeECCCCCEEEEEEeceEEEEEEeCCCc----------------------EEEEeEecCCcEEEE
Confidence 566788875 457899975 4567778899989998864210 125668999999999
Q ss_pred CCCCceeeeeCC
Q 004048 540 PRGFSHEACTED 551 (776)
Q Consensus 540 PRGwwH~a~A~d 551 (776)
|+|++|.-.+.+
T Consensus 381 P~G~~H~~~ag~ 392 (466)
T 3kgl_A 381 PQGFSVVKRATS 392 (466)
T ss_dssp CTTCEEEEEECS
T ss_pred CCCCeEEEEcCC
Confidence 999999986643
No 56
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=92.51 E-value=0.2 Score=51.56 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=42.3
Q ss_pred CcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
.+.++|+.. .+-++.-+.|+=++++.. ...+|+|||++|+|+|.+|...+.
T Consensus 57 ~~~~~h~H~~~~e~~~Vl~G~~~~~~~~----------------------------~~~~l~~Gd~~~~p~~~~H~~~n~ 108 (337)
T 1y3t_A 57 DAFPLHVHKDTHEGILVLDGKLELTLDG----------------------------ERYLLISGDYANIPAGTPHSYRMQ 108 (337)
T ss_dssp CEEEEEECTTCCEEEEEEESCEEEEETT----------------------------EEEEECTTCEEEECTTCCEEEEEC
T ss_pred CCCCceeCCCceEEEEEEECEEEEEECC----------------------------EEEEECCCCEEEECCCCcEEEEEC
Confidence 456788887 777778889987777521 345899999999999999999987
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 109 ~~ 110 (337)
T 1y3t_A 109 SH 110 (337)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 57
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=92.51 E-value=0.19 Score=51.20 Aligned_cols=64 Identities=14% Similarity=0.139 Sum_probs=49.6
Q ss_pred cceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeC
Q 004048 461 GANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIP 540 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIP 540 (776)
.+.+++=+||. .++.|....+=+.+-++|+=+|++... ..+++.|||++|+|
T Consensus 133 ~lG~v~l~PG~-~yP~HsHp~EEiy~VLsG~~e~~v~~g---------------------------~~~~l~pGd~v~ip 184 (217)
T 4b29_A 133 RVTVGYWGPGL-DYGWHEHLPEELYSVVSGRALFHLRNA---------------------------PDLMLEPGQTRFHP 184 (217)
T ss_dssp EEEEEEECSSC-EEEEEECSSEEEEEEEEECEEEEETTS---------------------------CCEEECTTCEEEEC
T ss_pred EEEEEEECCCC-cCCCCCCCCceEEEEEeCCEEEEECCC---------------------------CEEecCCCCEEEcC
Confidence 44445556644 478899988888888999999988631 22488999999999
Q ss_pred CCCceeeeeCCC
Q 004048 541 RGFSHEACTEDD 552 (776)
Q Consensus 541 RGwwH~a~A~de 552 (776)
+|..|..++.++
T Consensus 185 sgv~Ha~rt~de 196 (217)
T 4b29_A 185 ANAPHAMTTLTD 196 (217)
T ss_dssp TTCCEEEECCSS
T ss_pred CCCceeEEECCc
Confidence 999999998654
No 58
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=92.51 E-value=0.25 Score=48.33 Aligned_cols=60 Identities=15% Similarity=0.119 Sum_probs=41.0
Q ss_pred eeEEcCCCCCcccccc--cCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeC
Q 004048 463 NMYLTPPNSQGLASHY--DDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIP 540 (776)
Q Consensus 463 NaYlTPpg~qGf~pHy--D~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIP 540 (776)
.+.+.|. +++-++|+ +...+|.| +.|+=..+|.. ..++|.|||.+|+|
T Consensus 92 ~v~lpP~-G~~~~~~~~h~gEE~~yV-LeG~v~vtl~g----------------------------~~~~L~~Gds~~iP 141 (166)
T 2vpv_A 92 ILKLPAI-SGQKKLSNSFRTYITFHV-IQGIVEVTVCK----------------------------NKFLSVKGSTFQIP 141 (166)
T ss_dssp EEEECSS-GGGCEEEECCSEEEEEEE-EESEEEEEETT----------------------------EEEEEETTCEEEEC
T ss_pred EEEECCC-CCCCCCccCCCceEEEEE-EEeEEEEEECC----------------------------EEEEEcCCCEEEEC
Confidence 3455441 33445543 33445544 88887777643 45699999999999
Q ss_pred CCCceeeeeCCC
Q 004048 541 RGFSHEACTEDD 552 (776)
Q Consensus 541 RGwwH~a~A~de 552 (776)
+|..|..+...+
T Consensus 142 ~g~~H~~~N~~d 153 (166)
T 2vpv_A 142 AFNEYAIANRGN 153 (166)
T ss_dssp TTCEEEEEECSS
T ss_pred CCCCEEEEECCC
Confidence 999999999765
No 59
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=92.31 E-value=0.82 Score=45.66 Aligned_cols=83 Identities=12% Similarity=0.153 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhhhCCCcccceeEEcCCC--------CCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCC
Q 004048 442 ECLANIADGLASLFGQPSVGANMYLTPPN--------SQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDI 513 (776)
Q Consensus 442 p~LaeL~~aLe~~FG~P~v~aNaYlTPpg--------~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p 513 (776)
+.+.++... -|....+ -+.++|.. ..-+..|+-+.+=+..-+.|+=...+.....
T Consensus 62 ~~l~~l~~~----~gy~~~D-~v~~~p~~~p~~~~k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d------------ 124 (191)
T 1vr3_A 62 PELEKIRKM----RNYSWMD-IITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKED------------ 124 (191)
T ss_dssp HHHHHHHHH----HTCCEEE-EEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEEEEEEECTTS------------
T ss_pred HHHHHHHHh----cCCCcee-EEEECCCcCcchhhhhccCCcceECCcceEEEEEeceEEEEECCCCC------------
Confidence 345444443 5653223 35666653 2235778877777777788888888775211
Q ss_pred CCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 514 VNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 514 ~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
.+..+.++|||+++||+|..|...+.++
T Consensus 125 -----------~~~~i~v~~GDlIiIPaG~~H~f~~~~~ 152 (191)
T 1vr3_A 125 -----------KWIRISMEKGDMITLPAGIYHRFTLDEK 152 (191)
T ss_dssp -----------CEEEEEEETTEEEEECTTCCEEEEECTT
T ss_pred -----------eEEEEEECCCCEEEECcCCcCCcccCCC
Confidence 1245799999999999999999887543
No 60
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=92.25 E-value=0.42 Score=47.42 Aligned_cols=59 Identities=17% Similarity=0.258 Sum_probs=47.4
Q ss_pred ccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 474 LASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 474 f~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
+..|+|..|-+..|+.|.=.-.+....+ + +. ...+++|++|||..+|+|..|..++.++
T Consensus 47 ~D~H~~~~eE~Fy~lkG~m~l~v~d~g~---~----------------~~-~~~dv~i~eGdmfllP~gvpHsP~r~~e 105 (176)
T 1zvf_A 47 TDYHINPTPEWFYQKKGSMLLKVVDETD---A----------------EP-KFIDIIINEGDSYLLPGNVPHSPVRFAD 105 (176)
T ss_dssp SCEEECSSCEEEEEEESCEEEEEEECSS---S----------------SC-EEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred CcCcCCCCceEEEEEeCEEEEEEEcCCC---c----------------cc-ceeeEEECCCCEEEcCCCCCcCCcccCC
Confidence 7899999999999999998888875211 0 00 1267899999999999999999988655
No 61
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=92.14 E-value=0.26 Score=55.66 Aligned_cols=68 Identities=16% Similarity=0.187 Sum_probs=50.8
Q ss_pred cceeEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
-+.+.++|. +-..|||-. -+-+++-+.|+=+..+..+... ...+.+|++|||+||
T Consensus 360 ~a~v~L~pG--gm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~----------------------~~f~~~l~~GDV~v~ 415 (496)
T 3ksc_A 360 AEHGSLHKN--AMFVPHYNLNANSIIYALKGRARLQVVNCNGN----------------------TVFDGELEAGRALTV 415 (496)
T ss_dssp EEEEEEETT--CEEEEEEESSCCEEEEEEESEEEEEEECTTSC----------------------EEEEEEEETTCEEEE
T ss_pred EEEEEeeCC--eEECCeeCCCCCEEEEEEeceEEEEEEeCCCc----------------------EEEEEEecCCeEEEE
Confidence 456778775 457999965 3567778899999998864210 125568999999999
Q ss_pred CCCCceeeeeCCC
Q 004048 540 PRGFSHEACTEDD 552 (776)
Q Consensus 540 PRGwwH~a~A~de 552 (776)
|+|++|.-.+.++
T Consensus 416 P~G~~H~~~a~~e 428 (496)
T 3ksc_A 416 PQNYAVAAKSLSD 428 (496)
T ss_dssp CTTCEEEEEECSS
T ss_pred CCCCEEEEEeCCC
Confidence 9999998877643
No 62
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=92.13 E-value=0.24 Score=52.60 Aligned_cols=64 Identities=22% Similarity=0.377 Sum_probs=47.8
Q ss_pred eeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCC
Q 004048 463 NMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRG 542 (776)
Q Consensus 463 NaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG 542 (776)
.+.+.|. + ..++|+-..+-++.-+.|+=+..+..... + ....+|++||++|||+|
T Consensus 83 ~~~l~pg-~-~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g---------------------~--~~~~~l~~GD~~~ip~g 137 (385)
T 1j58_A 83 NMRLKPG-A-IRELHWHKEAEWAYMIYGSARVTIVDEKG---------------------R--SFIDDVGEGDLWYFPSG 137 (385)
T ss_dssp EEEECTT-C-EEEEEEESSCEEEEEEEEEEEEEEECTTS---------------------C--EEEEEEETTEEEEECTT
T ss_pred EEEECCC-C-CCCCccCChheEEEEEeeeEEEEEEeCCC---------------------c--EEEEEeCCCCEEEECCC
Confidence 3455554 3 57899988888888899988888764211 0 13459999999999999
Q ss_pred CceeeeeCC
Q 004048 543 FSHEACTED 551 (776)
Q Consensus 543 wwH~a~A~d 551 (776)
.+|...+.+
T Consensus 138 ~~H~~~n~~ 146 (385)
T 1j58_A 138 LPHSIQALE 146 (385)
T ss_dssp CCEEEEEEE
T ss_pred CeEEEEECC
Confidence 999998864
No 63
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=91.99 E-value=0.28 Score=54.74 Aligned_cols=66 Identities=18% Similarity=0.188 Sum_probs=48.6
Q ss_pred cceeEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
-+.+.+.|. +-..|||-. -+-++.=+.|+=+..+..+... ...+.+|++|||+||
T Consensus 324 ~a~v~l~pG--~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~----------------------~~~~~~l~~GDv~v~ 379 (459)
T 2e9q_A 324 AERGVLYSN--AMVAPHYTVNSHSVMYATRGNARVQVVDNFGQ----------------------SVFDGEVREGQVLMI 379 (459)
T ss_dssp EEEEEECTT--CEEEEEEESSCCEEEEEEEEEEEEEEECTTSC----------------------EEEEEEEETTCEEEE
T ss_pred eEEEEeeCC--cCccceECCCCCEEEEEEeeEEEEEEEeCCCC----------------------EEEeeEEeCCcEEEE
Confidence 456777765 457899977 3456777888888888763110 124558999999999
Q ss_pred CCCCceeeeeC
Q 004048 540 PRGFSHEACTE 550 (776)
Q Consensus 540 PRGwwH~a~A~ 550 (776)
|+|++|...+.
T Consensus 380 P~G~~H~~~ng 390 (459)
T 2e9q_A 380 PQNFVVIKRAS 390 (459)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCEEEEEeC
Confidence 99999999883
No 64
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=91.98 E-value=0.71 Score=50.59 Aligned_cols=126 Identities=18% Similarity=0.193 Sum_probs=80.1
Q ss_pred HHHHHHHHhccCCCc----hHHHHHHHHhhhhccccCCCCCCC----chhhHHHHHHHhhcCCCCCccchhHHHhhhhhh
Q 004048 25 FAILVAALSNSNNNY----SEFIIKKCLNRLRLSLLSQSQPTL----PIPILSLLPVLLNSKCSGGIAGLSAEIVGAASL 96 (776)
Q Consensus 25 f~~l~a~~~~~~~~~----~~~~~~~~l~~~~~~~~~~s~~~~----~~~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l 96 (776)
.+-|+..+ +++++. +..-+||+|++-+ .+ |. -.+++-.|=-||.++....+=..+|-+++-.|-
T Consensus 59 i~~~v~~l-~s~d~~~q~~a~~~~rklls~e~------~p-pi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias 130 (510)
T 3ul1_B 59 VEDIVKGI-NSNNLESQLQATQAARKLLSREK------QP-PIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIAS 130 (510)
T ss_dssp HHHHHHHH-TSSCHHHHHHHHHHHHHHHTCSS------CC-CHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHh-cCCCHHHHHHHHHHHHHHhcCCC------Cc-hHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhc
Confidence 45666666 444333 2667888888765 21 21 112232233334433321444556666654432
Q ss_pred hhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccc-hhhhhhhhcchhHHHHHHH
Q 004048 97 LSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTT-SVGRQKLLESSALEALLLI 159 (776)
Q Consensus 97 ~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t-~~~~~~l~~~~~l~~~~~~ 159 (776)
-+ +-|-+.-.|.+.+..|+.+|++++..|-+.|+-|+-+++.. .--|..+.+.-+++.++.+
T Consensus 131 ~~-~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~l 193 (510)
T 3ul1_B 131 GT-SEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLAL 193 (510)
T ss_dssp SC-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHH
T ss_pred CC-HHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHH
Confidence 22 23445557889999999999999999999999999999875 4557777888888887744
No 65
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=91.93 E-value=0.12 Score=47.63 Aligned_cols=64 Identities=11% Similarity=0.203 Sum_probs=44.8
Q ss_pred ccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 460 VGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 460 v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
..+.+|-..+| ....|++.++-|+.-++|+=..++-. + ..++|+|||++|+
T Consensus 49 ~~~g~w~~~pG--~~~~~~~~~~E~~~Vl~G~~~l~~~~-----------------------g----~~~~l~~GD~~~i 99 (123)
T 3bcw_A 49 VESGVWESTSG--SFQSNTTGYIEYCHIIEGEARLVDPD-----------------------G----TVHAVKAGDAFIM 99 (123)
T ss_dssp EEEEEEEEEEE--EEECCCTTEEEEEEEEEEEEEEECTT-----------------------C----CEEEEETTCEEEE
T ss_pred EEEEEEEECCC--ceeeEcCCCcEEEEEEEEEEEEEECC-----------------------C----eEEEECCCCEEEE
Confidence 34555665553 34568876567777788887665411 0 3358999999999
Q ss_pred CCCCceeeeeCCC
Q 004048 540 PRGFSHEACTEDD 552 (776)
Q Consensus 540 PRGwwH~a~A~de 552 (776)
|+|+.|..+..++
T Consensus 100 p~g~~h~~~~~~~ 112 (123)
T 3bcw_A 100 PEGYTGRWEVDRH 112 (123)
T ss_dssp CTTCCCEEEEEEE
T ss_pred CCCCeEEEEECCc
Confidence 9999999988653
No 66
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=91.91 E-value=0.24 Score=45.06 Aligned_cols=53 Identities=15% Similarity=0.279 Sum_probs=39.7
Q ss_pred CcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
..+++|+-. ..-++.-+.|+=...+.. ...+|+|||++|+|+|.+|...+.
T Consensus 68 ~~~~~H~H~~~~E~~~Vl~G~~~~~i~~----------------------------~~~~l~~Gd~i~i~~~~~H~~~n~ 119 (133)
T 1o4t_A 68 SSVGLHKHEGEFEIYYILLGEGVFHDNG----------------------------KDVPIKAGDVCFTDSGESHSIENT 119 (133)
T ss_dssp CEEEEEECCSEEEEEEEEESEEEEEETT----------------------------EEEEEETTEEEEECTTCEEEEECC
T ss_pred CccCceECCCccEEEEEEeCEEEEEECC----------------------------EEEEeCCCcEEEECCCCcEEeEEC
Confidence 457888864 455666778876655421 456999999999999999999886
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 120 ~~ 121 (133)
T 1o4t_A 120 GN 121 (133)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 67
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=91.84 E-value=0.18 Score=48.96 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=39.2
Q ss_pred eeEEcCCCCCcccccccCC-CeEEEEEe--eeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 463 NMYLTPPNSQGLASHYDDH-CVFVCQLF--GTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 463 NaYlTPpg~qGf~pHyD~~-DVFVlQL~--GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
.+|+... +.+..+||... +=++.-+. |+=...+.. ....|+|||++||
T Consensus 48 sv~~v~~-g~~~~~H~H~~~~E~~yVLe~~G~g~v~idg----------------------------e~~~l~~GD~v~I 98 (157)
T 4h7l_A 48 SVHYTQI-TKAARTHYHREHQEIYVVLDHAAHATIELNG----------------------------QSYPLTKLLAISI 98 (157)
T ss_dssp EEEEEEE-CSCCCCBBCSSCEEEEEEEEECTTCEEEETT----------------------------EEEECCTTEEEEE
T ss_pred EEEEEeC-CCCccceECCCCcEEEEEEecCcEEEEEECC----------------------------EEEEeCCCCEEEE
Confidence 4454434 24568898863 33444444 877777632 3458999999999
Q ss_pred CCCCceeee
Q 004048 540 PRGFSHEAC 548 (776)
Q Consensus 540 PRGwwH~a~ 548 (776)
|+|..|...
T Consensus 99 Ppg~~H~i~ 107 (157)
T 4h7l_A 99 PPLVRHRIV 107 (157)
T ss_dssp CTTCCEEEE
T ss_pred CCCCeEeeE
Confidence 999999997
No 68
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=91.83 E-value=0.17 Score=43.74 Aligned_cols=50 Identities=18% Similarity=0.266 Sum_probs=35.2
Q ss_pred ccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 474 LASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 474 f~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
+++|+... +-++.-+.|+=+..+... ...+|+|||++|+|+|.+|...+.
T Consensus 40 ~~~H~H~~~~E~~~Vl~G~~~~~~~~~---------------------------~~~~l~~Gd~~~ip~~~~H~~~~~ 90 (107)
T 2i45_A 40 YGWHTHGYSDKVLFAVEGDMAVDFADG---------------------------GSMTIREGEMAVVPKSVSHRPRSE 90 (107)
T ss_dssp CCCBCC--CCEEEEESSSCEEEEETTS---------------------------CEEEECTTEEEEECTTCCEEEEEE
T ss_pred CcceeCCCCCEEEEEEeCEEEEEECCC---------------------------cEEEECCCCEEEECCCCcEeeEeC
Confidence 45677665 666666777766554320 245899999999999999999884
No 69
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=91.82 E-value=0.18 Score=55.40 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=34.9
Q ss_pred cceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHH
Q 004048 525 ECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWE 577 (776)
Q Consensus 525 ~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We 577 (776)
.+.+++-.|||.+|||.||+|++....+| |.++.+|-.|-+-.
T Consensus 291 ~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~----------i~va~df~spe~~~ 333 (392)
T 2ypd_A 291 RTCTLIQFLGDAIVLPAGALHQVQNFHSC----------IQVTEDFVSPEHLV 333 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSEE----------EEEEEEECCGGGHH
T ss_pred eeEEEEEcCCCEEEecCCCHHHHhcccch----------hhHhhhhcChhhHH
Confidence 45889999999999999999999998754 36677777775533
No 70
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=91.67 E-value=0.2 Score=50.22 Aligned_cols=26 Identities=12% Similarity=0.147 Sum_probs=23.1
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
..++|+|||.+|+|+|.+|...+.++
T Consensus 184 ~~~~l~~Gd~i~ip~~~~H~~~n~~~ 209 (243)
T 3h7j_A 184 CTVEMKFGTAYFCEPREDHGAINRSE 209 (243)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECSS
T ss_pred EEEEECCCCEEEECCCCcEEeEeCCC
Confidence 45689999999999999999998754
No 71
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=91.63 E-value=0.49 Score=50.40 Aligned_cols=56 Identities=16% Similarity=0.094 Sum_probs=46.2
Q ss_pred CCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeee
Q 004048 470 NSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACT 549 (776)
Q Consensus 470 g~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A 549 (776)
++++++.|.-++|..+.-+.|+=+.++-.+ ...+|+|||+++||+|.+|...+
T Consensus 261 ~g~~~~~h~~~~~~~~~vleG~~~i~i~g~---------------------------~~~~l~~Gd~~~iPag~~h~~~~ 313 (350)
T 1juh_A 261 STVTVPTWSFPGACAFQVQEGRVVVQIGDY---------------------------AATELGSGDVAFIPGGVEFKYYS 313 (350)
T ss_dssp TTSCCCCBCCSSCEEEEEEESCEEEEETTS---------------------------CCEEECTTCEEEECTTCCEEEEE
T ss_pred CCCCCCcccCCCcEEEEEEeeEEEEEECCe---------------------------EEEEeCCCCEEEECCCCCEEEEe
Confidence 356788898899999999999988887542 12389999999999999999998
Q ss_pred CCC
Q 004048 550 EDD 552 (776)
Q Consensus 550 ~de 552 (776)
.++
T Consensus 314 ~~~ 316 (350)
T 1juh_A 314 EAY 316 (350)
T ss_dssp SSS
T ss_pred cCC
Confidence 754
No 72
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=91.53 E-value=0.26 Score=49.43 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=44.9
Q ss_pred CCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEee-eCCCCcee
Q 004048 468 PPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILY-IPRGFSHE 546 (776)
Q Consensus 468 Ppg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLY-IPRGwwH~ 546 (776)
++ +..+++|+-..+-++.-+.|+=+..+.. ...+|.|||.+| +|+|.+|.
T Consensus 42 ~p-g~~~~~H~H~~~e~~~Vl~G~~~~~~~~----------------------------~~~~l~~Gd~i~~ip~~~~H~ 92 (243)
T 3h7j_A 42 PP-HTNVEPHQHKEVQIGMVVSGELMMTVGD----------------------------VTRKMTALESAYIAPPHVPHG 92 (243)
T ss_dssp CT-TEEEEEECCSSEEEEEEEESEEEEEETT----------------------------EEEEEETTTCEEEECTTCCEE
T ss_pred CC-CCccCCEECCCcEEEEEEEeEEEEEECC----------------------------EEEEECCCCEEEEcCCCCcEe
Confidence 44 3457899888888888899987776621 345999999998 99999999
Q ss_pred eeeCCC
Q 004048 547 ACTEDD 552 (776)
Q Consensus 547 a~A~de 552 (776)
..+.++
T Consensus 93 ~~n~~~ 98 (243)
T 3h7j_A 93 ARNDTD 98 (243)
T ss_dssp EEECSS
T ss_pred eEeCCC
Confidence 999765
No 73
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=91.48 E-value=0.34 Score=46.59 Aligned_cols=136 Identities=18% Similarity=0.184 Sum_probs=92.4
Q ss_pred CCCCchHHHHHHHHHhccCCC---chHHHHHHHHhhhhccccCCCCCCCchhhHHHHHHHhhcCCCCCccchhHHHhhhh
Q 004048 18 QDNTNSIFAILVAALSNSNNN---YSEFIIKKCLNRLRLSLLSQSQPTLPIPILSLLPVLLNSKCSGGIAGLSAEIVGAA 94 (776)
Q Consensus 18 ~~~~~~~f~~l~a~~~~~~~~---~~~~~~~~~l~~~~~~~~~~s~~~~~~~~~~llp~ll~s~~~~~~a~~s~e~~g~a 94 (776)
.++....|+-++.-+...+.. .+...|++.+++.. ... ..-.-.+++..|--+|.+... ++-..++.++|-.
T Consensus 7 ~~~~~~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~-~~~---~~~~~~g~i~~L~~lL~~~~~-~v~~~a~~~L~~l 81 (252)
T 4db8_A 7 HHHHGSELPQMTQQLNSDDMQEQLSATRKFSQILSDGN-EQI---QAVIDAGALPALVQLLSSPNE-QILQEALWALSNI 81 (252)
T ss_dssp CCCTTCSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHH-HHH---HHHHHTTHHHHHHHGGGCSCH-HHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCC-chH---HHHHHcCcHHHHHHHHcCCCH-HHHHHHHHHHHHH
Confidence 444555577777777554322 22555666666522 000 000112344445555666665 7888888888877
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccchhhh-hhhhcchhHHHHHHH
Q 004048 95 SLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTTSVGR-QKLLESSALEALLLI 159 (776)
Q Consensus 95 ~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t~~~~-~~l~~~~~l~~~~~~ 159 (776)
+-.+- .|.+...+.+++..|+.+|.+.+..|...||.++-.++...-.+ +.+.+..+++.++.+
T Consensus 82 ~~~~~-~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~l 146 (252)
T 4db8_A 82 ASGGN-EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQL 146 (252)
T ss_dssp TTSCH-HHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHG
T ss_pred hcCCH-HHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHH
Confidence 65443 34455567789999999999999999999999999999998888 888888888888744
No 74
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=91.40 E-value=0.11 Score=53.07 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=44.5
Q ss_pred CCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCC-CCCCCCCCcccccccccceEEEEcCCcEeeeCCCCce
Q 004048 468 PPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLY-NPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSH 545 (776)
Q Consensus 468 Ppg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~-~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH 545 (776)
|| +++.++|+-. .+=++.-+.|+=+..+.. ...|... .++.. ..+.......+|+|||++|+|+|.+|
T Consensus 51 ~P-G~~~~~H~H~~~~E~~yVLeG~~~~~v~~---~~~~~~~~~~~~~------~~~~~~~~~~~l~~GD~i~iP~g~~H 120 (239)
T 2xlg_A 51 PP-GGGPMPHIHYFINEWFWTPEGGIELFHST---KQYPNMDELPVVG------GAGRGDLYSIQSEPKQLIYSPNHYMH 120 (239)
T ss_dssp CT-TCSCCSEEESSEEEEEEETTCCCEEEEEE---EECCCTTSCCSTT------TTCCEEEEEEECCTTEEEEECTTEEE
T ss_pred CC-CCcCCCeECCCccEEEEEEEeEEEEEEEe---cccccCCCccccc------ccccCceeEEEECCCCEEEECCCCCE
Confidence 55 3567899876 444555588887777710 0001000 00100 01111124789999999999999999
Q ss_pred eeeeCCC
Q 004048 546 EACTEDD 552 (776)
Q Consensus 546 ~a~A~de 552 (776)
.....++
T Consensus 121 ~~~N~~~ 127 (239)
T 2xlg_A 121 GFVNPTD 127 (239)
T ss_dssp EEECCSS
T ss_pred EEEeCCC
Confidence 9988654
No 75
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=91.15 E-value=0.78 Score=39.18 Aligned_cols=55 Identities=16% Similarity=0.066 Sum_probs=38.2
Q ss_pred CcccccccCCCe-EEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDDHCV-FVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~~DV-FVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
+.++.|.-..+- |+.-+.|+=+.++.. + . ...+|.|||.+|+|+|.+|.....
T Consensus 29 ~~~~~H~H~~~~e~~~Vl~G~~~~~~~~-----------------------g--~-~~~~l~~Gd~~~~p~~~~H~~~N~ 82 (97)
T 2fqp_A 29 GETGWHRHSMDYVVVPMTTGPLLLETPE-----------------------G--S-VTSQLTRGVSYTRPEGVEHNVINP 82 (97)
T ss_dssp CBCCSEECCSCEEEEESSCEEEEEEETT-----------------------E--E-EEEEECTTCCEEECTTCEEEEECC
T ss_pred CCCCCEECCCCcEEEEEeecEEEEEeCC-----------------------C--C-EEEEEcCCCEEEeCCCCcccCEeC
Confidence 345677776653 665666765544421 0 0 346999999999999999999987
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 83 g~ 84 (97)
T 2fqp_A 83 SD 84 (97)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 76
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=91.11 E-value=0.79 Score=50.29 Aligned_cols=25 Identities=32% Similarity=0.546 Sum_probs=22.5
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
..+.++|||++|+|+|.||.....+
T Consensus 332 e~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 332 KRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECC
T ss_pred EEEEEeCCCEEEECCCCeEEeEeCC
Confidence 5679999999999999999998764
No 77
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=90.99 E-value=0.37 Score=50.48 Aligned_cols=58 Identities=21% Similarity=0.365 Sum_probs=44.0
Q ss_pred CcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
+..++|+... +-++.-+.|+=+.++..+.. + ....+|++||++|+|+|.+|...+.
T Consensus 245 ~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g---------------------~--~~~~~l~~GD~~~ip~~~~H~~~n~ 301 (361)
T 2vqa_A 245 AMRQLHWHPNADEWQYVLDGEMDLTVFASEG---------------------K--ASVSRLQQGDVGYVPKGYGHAIRNS 301 (361)
T ss_dssp CEEEEEECSSCCEEEEEEESCEEEEEECSTT---------------------C--EEEEEECTTCEEEECTTCEEEEECC
T ss_pred cccccccCCCCCEEEEEEeCEEEEEEEcCCC---------------------c--EEEEEECCCCEEEECCCCeEEeEEC
Confidence 4567888775 67777788988888864211 0 1357999999999999999999886
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 302 ~~ 303 (361)
T 2vqa_A 302 SQ 303 (361)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 78
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=90.64 E-value=0.65 Score=50.94 Aligned_cols=91 Identities=20% Similarity=0.186 Sum_probs=66.9
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc--chhh
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST--TSVG 143 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~--t~~~ 143 (776)
+++..|..||.|... +|-..+|-+++-.+-.+-+ +-+...|.+++.-|+.+|.+++.+|-..||-|+-++++ +.--
T Consensus 335 g~l~~L~~LL~~~~~-~i~~~a~~aL~nl~~~~~~-~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~ 412 (529)
T 3tpo_A 335 GALAVFPSLLTNPKT-NIQKEATWTMSNITAGRQD-QIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQ 412 (529)
T ss_dssp TGGGGHHHHTTCSSH-HHHHHHHHHHHHHHTSCHH-HHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHH
T ss_pred ccHHHHHHHHcCCCH-HHHHHHHHHHHHHhcccHH-HHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHH
Confidence 345667777887776 7777777777765543332 33445688999999999999999999999999999876 3344
Q ss_pred hhhhhcchhHHHHHH
Q 004048 144 RQKLLESSALEALLL 158 (776)
Q Consensus 144 ~~~l~~~~~l~~~~~ 158 (776)
+..|.+.-+++.|+.
T Consensus 413 ~~~l~~~g~i~~L~~ 427 (529)
T 3tpo_A 413 IVYLVHCGIIEPLMN 427 (529)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHCcCHHHHHH
Confidence 556777777777663
No 79
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=90.42 E-value=0.48 Score=50.72 Aligned_cols=53 Identities=17% Similarity=0.245 Sum_probs=39.9
Q ss_pred CcccccccCCCeEEEEEeeeEEE-EEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQW-KIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrW-rL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
...++|+-..+-++.-+.|+=.+ .+.. ....|++||++|+|+|.+|...+.
T Consensus 111 ~~~~~H~H~~~e~~yVl~G~g~~t~v~g----------------------------~~~~l~~GD~~~iP~g~~H~~~n~ 162 (354)
T 2d40_A 111 EVAPSHRHNQSALRFIVEGKGAFTAVDG----------------------------ERTPMNEGDFILTPQWRWHDHGNP 162 (354)
T ss_dssp CEEEEEEESSCEEEEEEECSSCEEEETT----------------------------EEEECCTTCEEEECTTSCEEEECC
T ss_pred CCcCCeecCcceEEEEEEEEEEEEEECC----------------------------EEEEEcCCCEEEECCCCcEEeEeC
Confidence 44678887777777778886555 3311 456899999999999999999887
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 163 ~~ 164 (354)
T 2d40_A 163 GD 164 (354)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 80
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=90.42 E-value=0.61 Score=49.47 Aligned_cols=61 Identities=21% Similarity=0.366 Sum_probs=45.2
Q ss_pred CCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCcee
Q 004048 468 PPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHE 546 (776)
Q Consensus 468 Ppg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~ 546 (776)
++ +...++|+... +-++.-+.|+=+.++..+.. . ...++|+|||++|+|+|.+|.
T Consensus 265 ~p-G~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g---------------------~--~~~~~l~~GD~~~ip~~~~H~ 320 (385)
T 1j58_A 265 EP-GAMRELHWHPNTHEWQYYISGKARMTVFASDG---------------------H--ARTFNYQAGDVGYVPFAMGHY 320 (385)
T ss_dssp CT-TCEEEEEECSSSCEEEEEEESEEEEEEEEETT---------------------E--EEEEEEESSCEEEECTTCBEE
T ss_pred CC-CcccCceeCCCCCEEEEEEeCeEEEEEEcCCC---------------------c--EEEEEEcCCCEEEECCCCeEE
Confidence 44 34567788777 77777888988888763210 0 156799999999999999999
Q ss_pred eeeCCC
Q 004048 547 ACTEDD 552 (776)
Q Consensus 547 a~A~de 552 (776)
..+.++
T Consensus 321 ~~n~~~ 326 (385)
T 1j58_A 321 VENIGD 326 (385)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 988754
No 81
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=90.29 E-value=0.34 Score=53.25 Aligned_cols=64 Identities=19% Similarity=0.198 Sum_probs=45.3
Q ss_pred ceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCC
Q 004048 462 ANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPR 541 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPR 541 (776)
+.+.+.|. +...||+-+.+-++.-+.|+=+..+..+ .. ..+.+|++||++|||+
T Consensus 52 ~~~~l~PG--g~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~-----------------------~~~~~l~~GDv~~iP~ 105 (416)
T 1uij_A 52 VQFQSKPN--TILLPHHADADFLLFVLSGRAILTLVNN-DD-----------------------RDSYNLHPGDAQRIPA 105 (416)
T ss_dssp EEEEECTT--EEEEEEEESEEEEEEEEESCEEEEEECS-SC-----------------------EEEEEECTTEEEEECT
T ss_pred EEEEeccC--cCcccccCCCceEEEEEeeEEEEEEEEC-CC-----------------------CeEEEecCCCEEEECC
Confidence 34555554 4678886666666666777766666542 10 1456999999999999
Q ss_pred CCceeeeeCC
Q 004048 542 GFSHEACTED 551 (776)
Q Consensus 542 GwwH~a~A~d 551 (776)
|++|+....+
T Consensus 106 G~~H~~~N~g 115 (416)
T 1uij_A 106 GTTYYLVNPH 115 (416)
T ss_dssp TCEEEEEECC
T ss_pred CCeEEEEecC
Confidence 9999999984
No 82
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=90.25 E-value=0.8 Score=45.23 Aligned_cols=78 Identities=21% Similarity=0.316 Sum_probs=47.3
Q ss_pred eeEEcCCCCCcccccccCC--------CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccc--cccccceEEEEc
Q 004048 463 NMYLTPPNSQGLASHYDDH--------CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAE--SSMAECRQFLLR 532 (776)
Q Consensus 463 NaYlTPpg~qGf~pHyD~~--------DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd--~g~~~~~evvLe 532 (776)
-+++-| +|-.+.|+-.+ +-|++. .|. -.||-. ....+. + +...+ +. ...+...+++|+
T Consensus 57 ~l~l~p--GQ~~P~H~H~~~~~~~gK~E~~ivr-~G~--v~l~~~-g~~~~~---~--~v~v~-dg~~~~~~a~~~i~L~ 124 (175)
T 2y0o_A 57 ELVLFP--GQTCPEHRHPPVDGQEGKQETFRCR-YGK--VYLYVE-GEKTPL---P--KVLPP-QEDREHYTVWHEIELE 124 (175)
T ss_dssp EEEECT--TCEEEEEECCCCTTSCCCCEEEEEE-EEE--EEEEES-SSCCSS---C--SCCCC-GGGGGGCCCCEEEEEC
T ss_pred EEEECC--CCcCCceECCCCCCCCCCceeEEEe-cCE--EEEEEC-CccccC---c--ceecc-CCceeeecCCcEEEEC
Confidence 356655 47788888888 788744 466 344432 211110 0 01111 11 111234788999
Q ss_pred CCcEeeeCCCCceeeeeCCC
Q 004048 533 EGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 533 PGDVLYIPRGwwH~a~A~de 552 (776)
|||.++||+|.||...+.++
T Consensus 125 pGesvtIppg~~H~f~agee 144 (175)
T 2y0o_A 125 PGGQYTIPPNTKHWFQAGEE 144 (175)
T ss_dssp TTCEEEECTTCCEEEEEEEE
T ss_pred CCCEEEECCCCcEEEEeCCC
Confidence 99999999999999999433
No 83
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=90.21 E-value=1.8 Score=43.04 Aligned_cols=111 Identities=18% Similarity=0.159 Sum_probs=70.8
Q ss_pred cccCcHHHHHHHHHHHhhhCC-C-cccceeEEcCCCCCcccccccCC-------CeEEEEEeeeEEEEEecCCCCCCCCC
Q 004048 437 MEFRFECLANIADGLASLFGQ-P-SVGANMYLTPPNSQGLASHYDDH-------CVFVCQLFGTKQWKIFAQPSVQLPRL 507 (776)
Q Consensus 437 ld~~~p~LaeL~~aLe~~FG~-P-~v~aNaYlTPpg~qGf~pHyD~~-------DVFVlQL~GrKrWrL~~pp~~~lPr~ 507 (776)
...|.|.+..+.+.++..+|. + .+-+|.|- +|..++++|.|+. -+..|-+-+.....+.......-
T Consensus 77 ~~pwp~~L~~l~~~~~~~~g~~~n~~LvN~Y~--~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~--- 151 (204)
T 3s57_A 77 PKPWIPVLERIRDHVSGVTGQTFNFVLINRYK--DGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGK--- 151 (204)
T ss_dssp CEECCHHHHHHHHHHHHHHCCCCSEEEEEEES--STTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSS---
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCceeEEEEEC--CCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCcc---
Confidence 345778889999999888886 2 34677775 3344899999984 24577888889998886321100
Q ss_pred CCCCCCCCCcccccccccceEEEEcCCcEeeeCCCC---c-eeeeeCCCccCCCccceeEEEee
Q 004048 508 YNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGF---S-HEACTEDDGRTGLAEFSLHLTLG 567 (776)
Q Consensus 508 ~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGw---w-H~a~A~deg~~~~~~~SLHLT~S 567 (776)
. + ....+...+.|++||+|.++.+. | |.+..... ..+.-+.|||-
T Consensus 152 -~---~-------~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~----~~~~RislTFR 200 (204)
T 3s57_A 152 -S---P-------SRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKK----VLAPRVNLTFR 200 (204)
T ss_dssp -S---C-------SCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTT----CCSCEEEEEEE
T ss_pred -c---c-------ccCCceEEEECCCCCEEEECchhhheeEeeccccCC----CCCCEEEEEee
Confidence 0 0 00112378899999999999764 4 44443321 11355666663
No 84
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=90.20 E-value=0.38 Score=53.17 Aligned_cols=64 Identities=20% Similarity=0.265 Sum_probs=45.6
Q ss_pred ceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCC
Q 004048 462 ANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPR 541 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPR 541 (776)
+.+.+.|. +.++||+-+.+-++.-+.|+=+..+..+ .. ....+|++||++|+|+
T Consensus 64 ~~~~l~PG--g~~~pHh~~a~Ei~yVl~G~g~v~~v~~-~~-----------------------~~~~~l~~GDv~~iP~ 117 (434)
T 2ea7_A 64 VEFKSKPN--TLLLPHHADADFLLVVLNGTAVLTLVNP-DS-----------------------RDSYILEQGHAQKIPA 117 (434)
T ss_dssp EEEEECTT--EEEEEEEESEEEEEEEEESEEEEEEECS-SC-----------------------EEEEEEETTEEEEECT
T ss_pred EEEEecCC--cCccCccCCCceEEEEEecEEEEEEEeC-CC-----------------------CEEEEeCCCCEEEECC
Confidence 44555554 5678886666666666777766666532 10 1456999999999999
Q ss_pred CCceeeeeCC
Q 004048 542 GFSHEACTED 551 (776)
Q Consensus 542 GwwH~a~A~d 551 (776)
|++|+....+
T Consensus 118 G~~H~~~N~g 127 (434)
T 2ea7_A 118 GTTFFLVNPD 127 (434)
T ss_dssp TCEEEEEECC
T ss_pred CccEEEEeCC
Confidence 9999999986
No 85
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=90.11 E-value=2.4 Score=47.99 Aligned_cols=112 Identities=15% Similarity=0.208 Sum_probs=68.2
Q ss_pred cceeEEcCCCCCcccccccCCCeEE---EEEeeeEEEEEecCCCC---------CCCCCC-CCCCCCCCccccc--cccc
Q 004048 461 GANMYLTPPNSQGLASHYDDHCVFV---CQLFGTKQWKIFAQPSV---------QLPRLY-NPCDIVNGVEAES--SMAE 525 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~DVFV---lQL~GrKrWrL~~pp~~---------~lPr~~-~pf~p~~~~~dd~--g~~~ 525 (776)
...+|+..++ ..++.|.++++... .-.-|.|.|..-+.... ..+... ..+-+ ...+. ..-|
T Consensus 236 tpqLYigm~g-S~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~~p---spe~L~kagIP 311 (510)
T 4ask_A 236 TVQLYMKVPG-SRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWP---ILDDLYASNIP 311 (510)
T ss_dssp SCEEEEECTT-CEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCC---CHHHHHHTTCC
T ss_pred hhheEEcccc-ccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccccC---CHHHHHhCCCC
Confidence 4458999884 56899999987543 34566899988864211 001100 01100 01121 1236
Q ss_pred ceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHHHHHHHHHHhh
Q 004048 526 CRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEGFAHVALCCWN 588 (776)
Q Consensus 526 ~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~l~~~Al~~~~ 588 (776)
+..++=+|||++|+++|..|++.+.+ .+.. ++.++ +|.+|.-+ .+|...+.
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs~G--------f~~n--iaWNv-ap~t~~ql-qlA~e~y~ 362 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQATG--------WCNN--IAWNV-GPLTAYQY-QLALERYE 362 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS--------SEEE--EEEEE-CBSSHHHH-HHHHHHHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecC--------eeee--eEEEe-cCCCHHHH-HHHHHHHH
Confidence 78899999999999999999999975 3444 44444 35566543 45544444
No 86
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=90.01 E-value=0.57 Score=52.52 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=48.7
Q ss_pred cceeEEcCCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
-+.+.++|. +-.+|||-.. +-++.-+.|+=+..+..+... ...+.+|++|||+||
T Consensus 325 ~a~v~l~pG--gm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~----------------------~~f~~~l~~GDVfvv 380 (465)
T 3qac_A 325 AAKGVLYRN--AMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQ----------------------SVFDEELSRGQLVVV 380 (465)
T ss_dssp EEEEEECTT--CEEEEEEESSCCEEEEEEEEEEEEEEECTTSC----------------------EEEEEEEETTCEEEE
T ss_pred EEEEEecCC--cEeeeEECCCCCEEEEEEeCCEEEEEEeCCCc----------------------EEEEEEecCCeEEEE
Confidence 345677765 4579999763 567777888888888864110 125668999999999
Q ss_pred CCCCceeeeeC
Q 004048 540 PRGFSHEACTE 550 (776)
Q Consensus 540 PRGwwH~a~A~ 550 (776)
|+|++|.-.+.
T Consensus 381 P~g~~h~~~ag 391 (465)
T 3qac_A 381 PQNFAIVKQAF 391 (465)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCcEEEEEcC
Confidence 99999998754
No 87
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=89.70 E-value=0.3 Score=46.96 Aligned_cols=25 Identities=24% Similarity=0.570 Sum_probs=21.8
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
...+|+|||++|||+|..|.-.+.+
T Consensus 102 ~~~~l~~GD~i~iP~G~~h~~~n~~ 126 (151)
T 4axo_A 102 RKVSASSGELIFIPKGSKIQFSVPD 126 (151)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEE
T ss_pred EEEEEcCCCEEEECCCCEEEEEeCC
Confidence 4569999999999999999988763
No 88
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=89.69 E-value=2.1 Score=40.72 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=39.4
Q ss_pred ccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC-CC
Q 004048 476 SHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE-DD 552 (776)
Q Consensus 476 pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~-de 552 (776)
.|+...+-|+.-+.|+=+..+... . .....+|+|||.+|+|+|..|...+. ++
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~~-~-----------------------~~~~~~l~~GD~~~~~~~~~H~~~n~~~~ 188 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGDK-E-----------------------NPKEALLPTGASMFVEEHVPHAFTAAKGT 188 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESCT-T-----------------------SCEEEEECTTCEEEECTTCCEEEEESTTS
T ss_pred cccCCCeEEEEEEeeeEEEEECCc-C-----------------------CcccEEECCCCEEEeCCCCceEEEecCCC
Confidence 466555677777899887776431 0 01456999999999999999999987 44
No 89
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=89.67 E-value=0.72 Score=47.37 Aligned_cols=60 Identities=20% Similarity=0.263 Sum_probs=43.6
Q ss_pred eEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCC
Q 004048 464 MYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRG 542 (776)
Q Consensus 464 aYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG 542 (776)
+.+.|+ +...++|+-. .+-++.-+.|+=+.++.. ..++|+|||++|+|+|
T Consensus 222 ~~~~p~-g~~~~~h~H~~~~e~~~vl~G~~~~~i~~----------------------------~~~~l~~GD~~~ip~~ 272 (337)
T 1y3t_A 222 SSEGPK-GDRIVDHYHEYHTETFYCLEGQMTMWTDG----------------------------QEIQLNPGDFLHVPAN 272 (337)
T ss_dssp EEEECS-CCCCCCEECSSCEEEEEEEESCEEEEETT----------------------------EEEEECTTCEEEECTT
T ss_pred EEEcCC-CCCCCCcCCCCCcEEEEEEeCEEEEEECC----------------------------EEEEECCCCEEEECCC
Confidence 334455 4455788776 466777788876655521 4569999999999999
Q ss_pred CceeeeeCCC
Q 004048 543 FSHEACTEDD 552 (776)
Q Consensus 543 wwH~a~A~de 552 (776)
.+|...+.++
T Consensus 273 ~~H~~~n~~~ 282 (337)
T 1y3t_A 273 TVHSYRLDSH 282 (337)
T ss_dssp CCEEEEECSS
T ss_pred CeEEEEECCC
Confidence 9999998754
No 90
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=89.43 E-value=0.48 Score=51.60 Aligned_cols=26 Identities=23% Similarity=0.364 Sum_probs=23.6
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
.++.+++||++|+|+|.||.....++
T Consensus 142 ~~~~~~~GD~v~iP~g~~H~~~N~gd 167 (368)
T 3nw4_A 142 DPVRMSRGDLLLTPGWCFHGHMNDTD 167 (368)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSS
T ss_pred EEEEEeCCCEEEECCCCcEEeEeCCC
Confidence 56799999999999999999999755
No 91
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=89.15 E-value=0.58 Score=44.35 Aligned_cols=92 Identities=21% Similarity=0.239 Sum_probs=72.6
Q ss_pred hHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccc-cchhhhh
Q 004048 67 ILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLS-TTSVGRQ 145 (776)
Q Consensus 67 ~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s-~t~~~~~ 145 (776)
++..|--+|.+... .+-..++.++|-.+..+ +.+.+...+.+++..|+.+|.+.+..|...||.++-.++ .+.-.++
T Consensus 45 ~i~~L~~ll~~~~~-~v~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~ 122 (252)
T 4hxt_A 45 GVEVLVKLLTSTDS-EVQKEAARALANIASGP-DEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK 122 (252)
T ss_dssp HHHHHHHHTTCSCH-HHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CHHHHHHHHhCCCH-HHHHHHHHHHHHHHcCC-hHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 34444455666655 78888888888776543 455566668899999999999999999999999999999 6778888
Q ss_pred hhhcchhHHHHHHHH
Q 004048 146 KLLESSALEALLLIF 160 (776)
Q Consensus 146 ~l~~~~~l~~~~~~~ 160 (776)
.+.+..+++.++.+.
T Consensus 123 ~~~~~~~i~~L~~~l 137 (252)
T 4hxt_A 123 AIVDAGGVEVLVKLL 137 (252)
T ss_dssp HHHHTTHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHH
Confidence 888888888887443
No 92
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=89.15 E-value=1 Score=48.26 Aligned_cols=59 Identities=17% Similarity=0.098 Sum_probs=41.3
Q ss_pred eeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCC
Q 004048 463 NMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRG 542 (776)
Q Consensus 463 NaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG 542 (776)
.+..=++| +...+|.....-+..-+.|+=+-+|.. ..+.++|||++|||++
T Consensus 271 ~~~~l~pG-~~~~~H~h~~~ev~~v~~G~g~~~v~~----------------------------~~~~~~~GD~~~vP~~ 321 (354)
T 2d40_A 271 FLQLLPKG-FASRVARTTDSTIYHVVEGSGQVIIGN----------------------------ETFSFSAKDIFVVPTW 321 (354)
T ss_dssp EEEEECTT-CBCCCBEESSCEEEEEEEEEEEEEETT----------------------------EEEEEETTCEEEECTT
T ss_pred EEEEECCC-CCCCceecCCcEEEEEEeCeEEEEECC----------------------------EEEEEcCCCEEEECCC
Confidence 33334553 344778877665556667776666611 4569999999999999
Q ss_pred CceeeeeC
Q 004048 543 FSHEACTE 550 (776)
Q Consensus 543 wwH~a~A~ 550 (776)
.+|+..+.
T Consensus 322 ~~H~~~n~ 329 (354)
T 2d40_A 322 HGVSFQTT 329 (354)
T ss_dssp CCEEEEEE
T ss_pred CeEEEEeC
Confidence 99999884
No 93
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=88.94 E-value=0.44 Score=44.58 Aligned_cols=89 Identities=26% Similarity=0.218 Sum_probs=66.7
Q ss_pred HHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccc-hhhhhh
Q 004048 68 LSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTT-SVGRQK 146 (776)
Q Consensus 68 ~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t-~~~~~~ 146 (776)
+..|--+|.+... .+...++.+++-.+..+-+. .+...+.+.+..|+.+|.+.+.+|...||.++.+++.. .-.++.
T Consensus 98 i~~L~~lL~~~~~-~v~~~a~~~L~~l~~~~~~~-~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~ 175 (210)
T 4db6_A 98 LPALVQLLSSPNE-QILQEALWALSNIASGGNEQ-IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQA 175 (210)
T ss_dssp HHHHHHHTTCSCH-HHHHHHHHHHHHHTTSCHHH-HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHcCCcH-HHHHHHHHHHHHHHcCCHHH-HHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 3444455666655 77777888887776543333 23345889999999999999999999999999999887 666777
Q ss_pred hhcchhHHHHHH
Q 004048 147 LLESSALEALLL 158 (776)
Q Consensus 147 l~~~~~l~~~~~ 158 (776)
+.+..+++.++.
T Consensus 176 ~~~~g~i~~L~~ 187 (210)
T 4db6_A 176 VKEAGALEKLEQ 187 (210)
T ss_dssp HHHTTHHHHHHH
T ss_pred HHHCCCHHHHHH
Confidence 777777777774
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=88.70 E-value=1 Score=49.50 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=45.8
Q ss_pred CcccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEe
Q 004048 458 PSVGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDIL 537 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVL 537 (776)
|...++...=+| ++.+++|.-...-+..=++|+=.+..-. + ..+.+++||++
T Consensus 121 ~~L~a~~~~l~P-G~~~~~HrH~~~ev~~IleG~G~~t~v~-----------------------G----~~~~~~~GD~i 172 (394)
T 3bu7_A 121 GWLFSGIQTMKA-GERAGAHRHAASALRFIMEGSGAYTIVD-----------------------G----HKVELGANDFV 172 (394)
T ss_dssp TTBEEEEEEECT-TCBCCCEEESSCEEEEEEECSCEEEEET-----------------------T----EEEEECTTCEE
T ss_pred CeeEEEEEEECC-CCCcCCccCCcceEEEEEEeeEEEEEEC-----------------------C----EEEEEcCCCEE
Confidence 333445555566 4567888877666555566654452221 0 56699999999
Q ss_pred eeCCCCceeeee-CCC
Q 004048 538 YIPRGFSHEACT-EDD 552 (776)
Q Consensus 538 YIPRGwwH~a~A-~de 552 (776)
++|+|.||.... .++
T Consensus 173 ~~P~g~~H~~~N~~gd 188 (394)
T 3bu7_A 173 LTPNGTWHEHGILESG 188 (394)
T ss_dssp EECTTCCEEEEECTTC
T ss_pred EECcCCCEEEEcCCCC
Confidence 999999999988 654
No 95
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=88.67 E-value=0.71 Score=48.84 Aligned_cols=55 Identities=20% Similarity=0.363 Sum_probs=44.7
Q ss_pred ccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 474 LASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 474 f~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
+..|+|..|=|..|+.|.=+-++... + ...+++|++|||..+|+|+.|..++.++
T Consensus 44 ~d~H~~~~dE~FyqlkG~m~l~~~d~----------------------g--~~~~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 44 KDYHIEEGEEVFYQLEGDMVLRVLEQ----------------------G--KHRDVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp CCEEECSSCEEEEEEESCEEEEEEET----------------------T--EEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred ccCcCCCCCeEEEEEeCeEEEEEEeC----------------------C--ceeeEEECCCeEEEeCCCCCcCCcccCC
Confidence 67888888888888888877777641 0 1267899999999999999999999765
No 96
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=88.44 E-value=0.5 Score=51.83 Aligned_cols=72 Identities=13% Similarity=0.191 Sum_probs=48.5
Q ss_pred ceeEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeC
Q 004048 462 ANMYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIP 540 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIP 540 (776)
+.+-++|. +-..|||-. -+-++.=+.|+=+..+..+.. +. +. .+ ......+|++|||+|||
T Consensus 242 a~v~l~pG--~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~---~~-----~~-------~g-~~~~~~~l~~GDV~vvP 303 (397)
T 2phl_A 242 SSIEMEEG--ALFVPHYYSKAIVILVVNEGEAHVELVGPKG---NK-----ET-------LE-YESYRAELSKDDVFVIP 303 (397)
T ss_dssp EEEEECTT--EEEEEEEESSCEEEEEEEESEEEEEEEEECC----------CC-------SC-EEEEEEEEETTCEEEEC
T ss_pred EEEEEcCC--cEeeeeEcCCCCEEEEEEeeeEEEEEEeccc---cc-----cC-------CC-ceEEEEEecCCCEEEEC
Confidence 44566664 457899976 345666677887888875311 00 00 00 01367899999999999
Q ss_pred CCCceeeeeCC
Q 004048 541 RGFSHEACTED 551 (776)
Q Consensus 541 RGwwH~a~A~d 551 (776)
+|++|...+.+
T Consensus 304 ~G~~h~~~n~~ 314 (397)
T 2phl_A 304 AAYPVAIKATS 314 (397)
T ss_dssp TTCCEEEEESS
T ss_pred CCCeEEEEeCC
Confidence 99999999874
No 97
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=88.37 E-value=0.46 Score=45.58 Aligned_cols=59 Identities=15% Similarity=0.156 Sum_probs=41.3
Q ss_pred ccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCCc
Q 004048 474 LASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDDG 553 (776)
Q Consensus 474 f~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg 553 (776)
+--|-|.-++|+| +.|+=+-.+....... . ....++|+||++.-||+|+||...+..++
T Consensus 44 ~h~H~~tDE~Fiv-l~G~l~i~~rd~~~~~-----------------~---~d~~V~l~~Ge~yvVPkGveH~p~a~~e~ 102 (140)
T 3d0j_A 44 LEIHHSTDEQFIL-SAGKAILITAEKENDK-----------------F---NIELTLMEKGKVYNVPAECWFYSITQKDT 102 (140)
T ss_dssp EEEESSCCEEEEE-EESCEEEEEEEEETTE-----------------E---EEEEEECCTTCCEEECTTCEEEEEECTTC
T ss_pred hccCCCCCeEEEE-EecEEEEEEecCcCCC-----------------C---ccceEEecCCCEEEeCCCccCcccCCCce
Confidence 4556666666655 7888777766421100 0 11568999999999999999999998765
No 98
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=88.37 E-value=0.74 Score=50.44 Aligned_cols=90 Identities=19% Similarity=0.175 Sum_probs=65.6
Q ss_pred hHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc--chhhh
Q 004048 67 ILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST--TSVGR 144 (776)
Q Consensus 67 ~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~--t~~~~ 144 (776)
++..|..||.++.. +|-..+|-+++-.+-.+- .+.+...|.+++.-|+.+|.+++.+|-..||-|+-+++. +.--+
T Consensus 317 ~l~~L~~LL~~~~~-~v~~~A~~aL~nl~a~~~-~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~ 394 (510)
T 3ul1_B 317 ALAVFPSLLTNPKT-NIQKEATWTMSNITAGRQ-DQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQI 394 (510)
T ss_dssp GGGGCC-CTTCSSH-HHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred chHHHHHHhcCCCH-HHHHHHHHHHHHHHcCcH-HHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHH
Confidence 34455567777766 777777777776554333 344555688999999999999999999999999999976 34445
Q ss_pred hhhhcchhHHHHHH
Q 004048 145 QKLLESSALEALLL 158 (776)
Q Consensus 145 ~~l~~~~~l~~~~~ 158 (776)
..|.+.-+++.|+.
T Consensus 395 ~~L~~~g~i~~L~~ 408 (510)
T 3ul1_B 395 VYLVHCGIIEPLMN 408 (510)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHCCCHHHHHH
Confidence 56777777777763
No 99
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=88.22 E-value=1.4 Score=44.05 Aligned_cols=76 Identities=18% Similarity=0.170 Sum_probs=52.0
Q ss_pred CCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCC--CCce
Q 004048 468 PPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPR--GFSH 545 (776)
Q Consensus 468 Ppg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPR--GwwH 545 (776)
+| |++.++|--....++.-+.|+=+=++|..++.. .+ . ....+.+|.|||+.|+++ |.+|
T Consensus 87 ~P-Gq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g--------~~-------l--~~~~~~~l~~G~v~~~~~~~g~iH 148 (208)
T 2gm6_A 87 GP-GQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSG--------RP-------V--LHGEPTRLEPGHVEAVSPTVGDIH 148 (208)
T ss_dssp CT-TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTS--------CE-------E--ECSCCEEECTTCEEEEBTTTBCCE
T ss_pred CC-CcccCcccCCcceEEEEecccEEEEEeecCCCC--------cc-------c--cccceEEeCCCCEEEECCCCCCeE
Confidence 35 577899887778888899999888888532210 00 0 011456999999999999 9999
Q ss_pred eeeeC-CCccCCCccceeEEE
Q 004048 546 EACTE-DDGRTGLAEFSLHLT 565 (776)
Q Consensus 546 ~a~A~-deg~~~~~~~SLHLT 565 (776)
.+... ++. ...|||+-
T Consensus 149 ~V~N~~~~~----~avsLHvY 165 (208)
T 2gm6_A 149 RVHNAYDDR----VSISIHVY 165 (208)
T ss_dssp EEEESCSSS----CEEEEEEE
T ss_pred EeccCCCCC----cEEEEEEE
Confidence 99954 221 12677763
No 100
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=88.19 E-value=0.9 Score=48.35 Aligned_cols=65 Identities=22% Similarity=0.177 Sum_probs=45.2
Q ss_pred eEEcCCCCCccc--ccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeC
Q 004048 464 MYLTPPNSQGLA--SHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIP 540 (776)
Q Consensus 464 aYlTPpg~qGf~--pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIP 540 (776)
..+.|+ +...+ +|+-. .+=++.-+.|+=+..+..... .....+|+|||++|+|
T Consensus 52 ~~~~p~-g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g-----------------------~~~~~~L~~GD~v~ip 107 (350)
T 1juh_A 52 GTNAPH-SDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNE-----------------------TQQTRVLSSGDYGSVP 107 (350)
T ss_dssp EEEECC-CSSCSSCCEECSSCEEEEEEEESEEEEEEEETTS-----------------------CCEEEEEETTCEEEEC
T ss_pred EEEcCC-CCCCCCccccCCCceEEEEEEEEEEEEEECCcCC-----------------------ceEEEEECCCCEEEEC
Confidence 334454 44555 77765 455555689988887765211 0156799999999999
Q ss_pred CCCceeeeeCCC
Q 004048 541 RGFSHEACTEDD 552 (776)
Q Consensus 541 RGwwH~a~A~de 552 (776)
+|.+|.....++
T Consensus 108 ~g~~H~~~n~~~ 119 (350)
T 1juh_A 108 RNVTHTFQIQDP 119 (350)
T ss_dssp TTEEEEEEECST
T ss_pred CCCcEEEEeCCC
Confidence 999999998754
No 101
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=87.79 E-value=0.71 Score=42.81 Aligned_cols=49 Identities=20% Similarity=0.221 Sum_probs=35.2
Q ss_pred cccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 473 GLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 473 Gf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
.+..|++ .+=|+.=++|+=..++.. ..++|+|||++|+|+|..|.-...
T Consensus 68 ~~~~h~~-~~E~~~VLeG~~~l~~~g----------------------------~~~~l~~GD~i~~p~g~~h~~~~~ 116 (133)
T 2pyt_A 68 FFPWTLN-YDEIDMVLEGELHVRHEG----------------------------ETMIAKAGDVMFIPKGSSIEFGTP 116 (133)
T ss_dssp EEEEECS-SEEEEEEEEEEEEEEETT----------------------------EEEEEETTCEEEECTTCEEEEEEE
T ss_pred CccccCC-CCEEEEEEECEEEEEECC----------------------------EEEEECCCcEEEECCCCEEEEEeC
Confidence 3456665 455555577876665531 445999999999999999998864
No 102
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=87.71 E-value=0.83 Score=49.25 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=56.2
Q ss_pred cceeEEcCCCCCcccccccCCCeEEE---EEeeeEEEEEecCCCC---------CCCCCCC-CCCCCCCcccc--ccccc
Q 004048 461 GANMYLTPPNSQGLASHYDDHCVFVC---QLFGTKQWKIFAQPSV---------QLPRLYN-PCDIVNGVEAE--SSMAE 525 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~DVFVl---QL~GrKrWrL~~pp~~---------~lPr~~~-pf~p~~~~~dd--~g~~~ 525 (776)
...+|+..++ ..++.|.++++...+ -.-|.|.|-.-|.... ..+..+. .+-+ ..++ ...-+
T Consensus 202 ~pqLYig~~g-S~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~l~~k~~~d~~~~~~~~---~p~~L~~~gIP 277 (332)
T 2xxz_A 202 TVQLYMKVPG-SRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWP---ILDDLYASNIP 277 (332)
T ss_dssp SEEEEEECTT-CEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCC---CHHHHHHTTCC
T ss_pred hhheEeecCc-ccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHHHHHhcCCchhhceecC---CHHHHHhCCCC
Confidence 3458998884 568999999876433 4457889988764210 0111110 1101 1111 12236
Q ss_pred ceEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 526 CRQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 526 ~~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
+..++=+|||.+|+++|..|++.+.+
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G 303 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATG 303 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS
T ss_pred eEEEEECCCCEEEECCCceEEEEecc
Confidence 78999999999999999999999875
No 103
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=87.42 E-value=0.56 Score=50.05 Aligned_cols=94 Identities=19% Similarity=0.174 Sum_probs=71.0
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchh----hHHHHHhhhhhcccc--
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEK----RVLVAAANAVLDLST-- 139 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~----~v~~~a~n~vld~s~-- 139 (776)
.+=.|+.+|+.+... ++-..++.+++..|..+-|...+|..+.+.+..|+.+|.+.+. .|.+.||-++-++|.
T Consensus 171 ~Ip~Lv~lL~~~~~~-~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~ 249 (354)
T 3nmw_A 171 SVKALMECALEVKKE-STLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLI 249 (354)
T ss_dssp HHHHHHHHHHHCCCH-HHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCH-HHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhc
Confidence 344455555665554 5666666666665554445556777789999999999998765 499999999999996
Q ss_pred --chhhhhhhhcchhHHHHHHHH
Q 004048 140 --TSVGRQKLLESSALEALLLIF 160 (776)
Q Consensus 140 --t~~~~~~l~~~~~l~~~~~~~ 160 (776)
+.-+|+.+.+..+++.|+.+.
T Consensus 250 a~~~~~~~~i~~~g~i~~Lv~lL 272 (354)
T 3nmw_A 250 ATNEDHRQILRENNCLQTLLQHL 272 (354)
T ss_dssp TTCHHHHHHHHTTTHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCHHHHHHHH
Confidence 888999999999999988554
No 104
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=86.60 E-value=0.48 Score=46.66 Aligned_cols=55 Identities=16% Similarity=0.148 Sum_probs=37.5
Q ss_pred ccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 474 LASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 474 f~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
+..|+-+.+=+..-+.|+=...+... . ....++++|||+++||+|.+|.....++
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~~~-d-----------------------~~~~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLHIG-D-----------------------EVFQVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEECS-S-----------------------CEEEEECCCSCEEEECTTCCBCCCCSSC
T ss_pred ccceECChheEEEEEcceEEEEEEeC-C-----------------------EEEEEEECCCCEEEECCCCeEeeecCCC
Confidence 56777666656666777655544310 1 1245689999999999999999876543
No 105
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=86.46 E-value=1.1 Score=45.25 Aligned_cols=45 Identities=24% Similarity=0.301 Sum_probs=35.3
Q ss_pred CCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 480 DHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 480 ~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
..+-|+.-++|+=+.++.. .+.+|+|||.+|+|+|..|..+..++
T Consensus 80 ~~ee~~~Vl~G~l~~~~~~----------------------------~~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 80 GIETFLYVISGNITAKAEG----------------------------KTFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp TEEEEEEEEESEEEEEETT----------------------------EEEEEETTEEEEECTTCCCEEEECSS
T ss_pred CceEEEEEEEeEEEEEECC----------------------------EEEEECCCCEEEECCCCCEEEEeCCC
Confidence 3456777788887666532 45699999999999999999998754
No 106
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=86.00 E-value=0.9 Score=49.04 Aligned_cols=92 Identities=24% Similarity=0.229 Sum_probs=66.1
Q ss_pred hHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc-chhhhh
Q 004048 67 ILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST-TSVGRQ 145 (776)
Q Consensus 67 ~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~-t~~~~~ 145 (776)
++..|--+|.+... .|...++.+++..+-.+ +..-+...+.+++..|+.+|...+..|...||.++-++++ +...++
T Consensus 245 ~l~~L~~lL~~~~~-~v~~~a~~aL~~l~~~~-~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~ 322 (528)
T 4b8j_A 245 ALPALARLIHSNDE-EVLTDACWALSYLSDGT-NDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQ 322 (528)
T ss_dssp HHHHHHHHTTCCCH-HHHHHHHHHHHHHTSSC-HHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHCCCCH-HHHHHHHHHHHHHHcCC-HHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHH
Confidence 34444445566555 77777777777655321 2222455688999999999999999999999999999998 455667
Q ss_pred hhhcchhHHHHHHHH
Q 004048 146 KLLESSALEALLLIF 160 (776)
Q Consensus 146 ~l~~~~~l~~~~~~~ 160 (776)
.+.+..+++.++.+.
T Consensus 323 ~~~~~~~l~~L~~lL 337 (528)
T 4b8j_A 323 CIIDHQALPCLLSLL 337 (528)
T ss_dssp HHHTTTHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHH
Confidence 777777888877554
No 107
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=85.99 E-value=0.9 Score=42.44 Aligned_cols=91 Identities=23% Similarity=0.242 Sum_probs=66.9
Q ss_pred HHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccc-hhhhhh
Q 004048 68 LSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTT-SVGRQK 146 (776)
Q Consensus 68 ~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t-~~~~~~ 146 (776)
+..|--+|.+... .+-..++.++|-.+..+ +.+.+...+.+.+..|+.+|.+.+..|...||.++-.++.. .-.++.
T Consensus 56 i~~L~~lL~~~~~-~v~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 133 (210)
T 4db6_A 56 LPALVQLLSSPNE-QILQEALWALSNIASGG-NEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 133 (210)
T ss_dssp HHHHHHHTTCSCH-HHHHHHHHHHHHHTTSC-HHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHcCCCH-HHHHHHHHHHHHHhcCC-cHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3444445566655 77777777777665432 44555666889999999999999999999999999999964 444566
Q ss_pred hhcchhHHHHHHHH
Q 004048 147 LLESSALEALLLIF 160 (776)
Q Consensus 147 l~~~~~l~~~~~~~ 160 (776)
+.+..+++.++.+.
T Consensus 134 ~~~~~~i~~L~~ll 147 (210)
T 4db6_A 134 VIDAGALPALVQLL 147 (210)
T ss_dssp HHHTTHHHHHHHHT
T ss_pred HHHcCcHHHHHHHH
Confidence 77777888877543
No 108
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=85.81 E-value=2 Score=43.81 Aligned_cols=26 Identities=12% Similarity=0.294 Sum_probs=22.7
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
....|+|||++|||+|.+|...+.++
T Consensus 221 ~~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 221 EWYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEEEECCCCEEEECCCCCEEEEeCCC
Confidence 45699999999999999999998754
No 109
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=85.61 E-value=0.93 Score=50.32 Aligned_cols=56 Identities=21% Similarity=0.224 Sum_probs=42.3
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
+...||+-..+-++.-+.|+=+..+..+.. ....+|++||++|+|+|..|+....+
T Consensus 97 g~~~pHh~~a~E~~yVl~G~g~v~~v~~~~------------------------~~~~~l~~GDv~~~P~G~~H~~~N~g 152 (445)
T 2cav_A 97 TLLLPHHSDSDLLVLVLEGQAILVLVNPDG------------------------RDTYKLDQGDAIKIQAGTPFYLINPD 152 (445)
T ss_dssp EEEEEEEESSEEEEEEEESEEEEEEEETTE------------------------EEEEEEETTEEEEECTTCCEEEEECC
T ss_pred cCccCcCCCCceEEEEEeCEEEEEEEeCCC------------------------CEEEEecCCCEEEECCCCcEEEEECC
Confidence 456888766666777777877777664210 04569999999999999999999986
No 110
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=85.45 E-value=0.95 Score=45.74 Aligned_cols=26 Identities=8% Similarity=0.129 Sum_probs=21.6
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
....|+|||++|+|+|.+|...+.++
T Consensus 218 ~~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 218 NWIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp CEEEEETTCEEEECSSEEEEEEEC--
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 34689999999999999999988754
No 111
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=84.59 E-value=1.6 Score=45.15 Aligned_cols=67 Identities=13% Similarity=0.193 Sum_probs=42.9
Q ss_pred cceeEEcCCCCCcccccccCCC-eEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC-C---c
Q 004048 461 GANMYLTPPNSQGLASHYDDHC-VFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE-G---D 535 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~D-VFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP-G---D 535 (776)
+.+...+.++ ..-+.||.... -.++-+.|+=+..+..+ . + + ....+++ | |
T Consensus 273 q~~ls~~~~g-~~rg~h~h~~~~e~~~~~~G~~~~~~~~~-~---------~----------~----~~~~~~~~~~~~~ 327 (369)
T 3st7_A 273 QVSVNISKPG-ITKGNHWHHTKNEKFLVVSGKGVIRFRHV-N---------D----------D----EIIEYYVSGDKLE 327 (369)
T ss_dssp EEEEEEECTT-CEEEEEECSSCCEEEEEEESEEEEEEEET-T---------C----------C----CCEEEEEETTBCC
T ss_pred eEEEEEecCC-ceeccccccCcceEEEEEeeeEEEEEEcC-C---------C----------C----cEEEEEecCCcce
Confidence 4455566663 33466666543 35566788888888732 1 0 1 2234444 7 9
Q ss_pred EeeeCCCCceeeeeCCC
Q 004048 536 ILYIPRGFSHEACTEDD 552 (776)
Q Consensus 536 VLYIPRGwwH~a~A~de 552 (776)
++|||+|+||.-...++
T Consensus 328 ~~~ip~g~~h~~~n~~~ 344 (369)
T 3st7_A 328 VVDIPVGYTHNIENLGD 344 (369)
T ss_dssp EEEECTTEEEEEEECSS
T ss_pred EEEeCCCceEEeEEcCC
Confidence 99999999999999863
No 112
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=84.34 E-value=1.1 Score=49.20 Aligned_cols=77 Identities=14% Similarity=0.213 Sum_probs=47.5
Q ss_pred ceeEEcCCCCCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccc-cceEEEEcCCcEeee
Q 004048 462 ANMYLTPPNSQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMA-ECRQFLLREGDILYI 539 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~-~~~evvLePGDVLYI 539 (776)
+.+.++|. +-..|||-. -+-++.-+.|+=+..+..+....- .+ . ..+.+.. ...+.+|++|||+||
T Consensus 252 a~~~l~~g--~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~---~~--~-----~~~~~~~~~~~~~~l~~Gdv~vv 319 (416)
T 1uij_A 252 SSVDINEG--ALLLPHFNSKAIVILVINEGDANIELVGIKEQQQ---KQ--K-----QEEEPLEVQRYRAELSEDDVFVI 319 (416)
T ss_dssp EEEEECTT--EEEEEEEESSCEEEEEEEESEEEEEEEEEC----------------------CCEEEEEEEEETTCEEEE
T ss_pred EEEEEcCC--cEecceEcCCCcEEEEEEeeEEEEEEEcCCCccc---cc--c-----ccccccceEEEEEEecCCcEEEE
Confidence 45677765 457899976 345666677877787776421000 00 0 0000110 124459999999999
Q ss_pred CCCCceeeeeC
Q 004048 540 PRGFSHEACTE 550 (776)
Q Consensus 540 PRGwwH~a~A~ 550 (776)
|+|++|...+.
T Consensus 320 P~g~~h~~~n~ 330 (416)
T 1uij_A 320 PAAYPFVVNAT 330 (416)
T ss_dssp CTTCCEEEEES
T ss_pred CCCCeEEEEcC
Confidence 99999999987
No 113
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=84.23 E-value=1.4 Score=41.74 Aligned_cols=89 Identities=21% Similarity=0.250 Sum_probs=66.5
Q ss_pred HHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc-chhhhhh
Q 004048 68 LSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST-TSVGRQK 146 (776)
Q Consensus 68 ~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~-t~~~~~~ 146 (776)
+..|=-+|.+... .+...++.++|-.+..+ +.+.+...+.+++..|+.+|.+.+..|...||.++-.++. +.-.++.
T Consensus 130 i~~L~~~l~~~~~-~~~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 207 (252)
T 4hxt_A 130 VEVLVKLLTSTDS-EVQKEAARALANIASGP-DEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKA 207 (252)
T ss_dssp HHHHHHHTTCSCH-HHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHH
T ss_pred HHHHHHHHcCCCH-HHHHHHHHHHHHHHcCC-HHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3333345555555 77788888887766543 3443455678999999999999999999999999999997 5566777
Q ss_pred hhcchhHHHHHH
Q 004048 147 LLESSALEALLL 158 (776)
Q Consensus 147 l~~~~~l~~~~~ 158 (776)
+.+..+++.++.
T Consensus 208 l~~~~~i~~L~~ 219 (252)
T 4hxt_A 208 IVDAGGVEVLQK 219 (252)
T ss_dssp HHHTTHHHHHHH
T ss_pred HHHCCCHHHHHH
Confidence 777777777774
No 114
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=84.21 E-value=1.4 Score=45.08 Aligned_cols=61 Identities=11% Similarity=0.012 Sum_probs=40.3
Q ss_pred eEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCC
Q 004048 464 MYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGF 543 (776)
Q Consensus 464 aYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGw 543 (776)
+.+.|.++.+...|....+-|+.-++|+=+.++.. .+.+|+|||.+|+|+|.
T Consensus 67 ~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~----------------------------~~~~L~~GD~~~~~~~~ 118 (274)
T 1sef_A 67 ATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQ----------------------------ETHELEAGGYAYFTPEM 118 (274)
T ss_dssp EEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSS----------------------------CEEEEETTEEEEECTTS
T ss_pred EEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECC----------------------------EEEEECCCCEEEECCCC
Confidence 34444422222233333456777788876655421 34599999999999999
Q ss_pred ceeeeeCCC
Q 004048 544 SHEACTEDD 552 (776)
Q Consensus 544 wH~a~A~de 552 (776)
.|..++.++
T Consensus 119 ~H~~~N~~~ 127 (274)
T 1sef_A 119 KMYLANAQE 127 (274)
T ss_dssp CCEEEESSS
T ss_pred CEEEEeCCC
Confidence 999999754
No 115
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=84.04 E-value=1.8 Score=41.47 Aligned_cols=88 Identities=20% Similarity=0.163 Sum_probs=69.1
Q ss_pred HHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc-chhhhhhhh
Q 004048 70 LLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST-TSVGRQKLL 148 (776)
Q Consensus 70 llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~-t~~~~~~l~ 148 (776)
-+--+|.|... ++-..+|..+....-. -+.|-+...+.+++..|+.+|.+.+..|...||.++-.++. +.-.++.+.
T Consensus 16 ~~~~~L~s~~~-~~~~~a~~~L~~~l~~-~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~ 93 (252)
T 4db8_A 16 QMTQQLNSDDM-QEQLSATRKFSQILSD-GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVI 93 (252)
T ss_dssp HHHHHHHSSCS-SHHHHHHHHHHHHHHH-HHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHcCCCH-HHHHHHHHHHHHHHcC-CCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 34456677777 8888888888533222 34455556788999999999999999999999999999998 788888898
Q ss_pred cchhHHHHHHH
Q 004048 149 ESSALEALLLI 159 (776)
Q Consensus 149 ~~~~l~~~~~~ 159 (776)
+..+++.++.+
T Consensus 94 ~~g~i~~L~~l 104 (252)
T 4db8_A 94 DAGALPALVQL 104 (252)
T ss_dssp HTTHHHHHHHG
T ss_pred HcCCHHHHHHH
Confidence 88888888744
No 116
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=84.00 E-value=2 Score=38.71 Aligned_cols=25 Identities=40% Similarity=0.634 Sum_probs=21.5
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
....++|||+++||+|.+|...+.+
T Consensus 56 ~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 56 REFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECT
T ss_pred EEEEecCCeEEEEcCCCCEEEEeCC
Confidence 4568999999999999999987754
No 117
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=83.32 E-value=2.9 Score=43.55 Aligned_cols=91 Identities=13% Similarity=0.112 Sum_probs=62.7
Q ss_pred HHHHHHHhhcC-CCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccc-hhhhh
Q 004048 68 LSLLPVLLNSK-CSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTT-SVGRQ 145 (776)
Q Consensus 68 ~~llp~ll~s~-~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t-~~~~~ 145 (776)
+..|-.||.+. .. ++...++-.++..+- ....+-+.-.+.+.+..|+.+|.+++.+|...||.++=+++.. .--++
T Consensus 126 l~~Ll~LL~~~~~~-~v~~~A~~ALsnl~~-~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~ 203 (296)
T 1xqr_A 126 LRKLLRLLDRDACD-TVRVKALFAISCLVR-EQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKG 203 (296)
T ss_dssp HHHHHHHHHHCSCH-HHHHHHHHHHHHHHT-TCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHHHHccCCCH-HHHHHHHHHHHHHHc-CCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHH
Confidence 34444555553 33 566666555553221 2333333445678899999999999999999999999998764 44577
Q ss_pred hhhcchhHHHHHHHH
Q 004048 146 KLLESSALEALLLIF 160 (776)
Q Consensus 146 ~l~~~~~l~~~~~~~ 160 (776)
.+.+.-+++.|..+.
T Consensus 204 ~vv~~g~i~~Lv~LL 218 (296)
T 1xqr_A 204 TLCSMGMVQQLVALV 218 (296)
T ss_dssp HHHHTTHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHH
Confidence 888888888888654
No 118
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=83.30 E-value=1.5 Score=48.43 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=49.0
Q ss_pred ceeEEcCCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccc-cceEEEEcCCcEeee
Q 004048 462 ANMYLTPPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMA-ECRQFLLREGDILYI 539 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~-~~~evvLePGDVLYI 539 (776)
+.+.++|. +-..|||-.. +-++.=+.|+=+..+..+....- . + + ...+.. ...+.+|++|||+||
T Consensus 269 a~v~l~pG--~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~-~--~--~------~~~~~~~r~~~~~l~~Gdv~vv 335 (434)
T 2ea7_A 269 SSVDMKEG--ALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQ-Q--K--Q------QEESLEVQRYRAELSEDDVFVI 335 (434)
T ss_dssp EEEEECTT--EEEEEEEESSCEEEEEEEESCEEEEEEEEEECCC-C--T--T------SCCCEEEEEEEEEECTTCEEEE
T ss_pred EEEEEcCC--eeeccEEcCCCCEEEEEEeeEEEEEEEecCcccc-c--c--c------cccCcceEEEEEEecCCcEEEE
Confidence 45677765 4578999773 45666777888888875421000 0 0 0 000110 124459999999999
Q ss_pred CCCCceeeeeCC
Q 004048 540 PRGFSHEACTED 551 (776)
Q Consensus 540 PRGwwH~a~A~d 551 (776)
|+|++|...+.+
T Consensus 336 P~g~~h~~~n~~ 347 (434)
T 2ea7_A 336 PAAYPVAINATS 347 (434)
T ss_dssp CTTCCEEEEESS
T ss_pred CCCCeEEEEcCC
Confidence 999999999873
No 119
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=82.78 E-value=1.5 Score=48.59 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=48.2
Q ss_pred ceeEEcCCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccc-cceEEEEcCCcEeee
Q 004048 462 ANMYLTPPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMA-ECRQFLLREGDILYI 539 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~-~~~evvLePGDVLYI 539 (776)
+.+.++|. +-..|||-.. +-++.=+.|+=+..+..+....- + + +.+.. ...+.+|++|||+||
T Consensus 284 ~~v~l~pg--~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~----~--~-------~~g~~~~~~~~~l~~GdV~vv 348 (445)
T 2cav_A 284 NCLQMNEG--ALFVPHYNSRATVILVANEGRAEVELVGLEQQQQ----Q--G-------LESMQLRRYAATLSEGDIIVI 348 (445)
T ss_dssp EEEEECTT--EEEEEEEESSCEEEEEEEESCEEEEEEEC------------------------CCEEEEEEECTTCEEEE
T ss_pred EEEEeeCC--ceeeeEECCCCcEEEEEEeeEEEEEEEeCCCccc----c--c-------ccCcceEEEEeEecCCcEEEE
Confidence 44667664 4578999763 45666778888888886421100 0 0 00111 126779999999999
Q ss_pred CCCCceeeeeC
Q 004048 540 PRGFSHEACTE 550 (776)
Q Consensus 540 PRGwwH~a~A~ 550 (776)
|+|++|...+.
T Consensus 349 P~g~~h~~~n~ 359 (445)
T 2cav_A 349 PSSFPVALKAA 359 (445)
T ss_dssp CTTCCEEEEES
T ss_pred cCCcEEEEEcC
Confidence 99999999987
No 120
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=82.24 E-value=2.4 Score=47.77 Aligned_cols=86 Identities=14% Similarity=0.110 Sum_probs=48.4
Q ss_pred ceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCC--CCCCcc-cc--cccccceEEEEcCCcE
Q 004048 462 ANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCD--IVNGVE-AE--SSMAECRQFLLREGDI 536 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~--p~~~~~-dd--~g~~~~~evvLePGDV 536 (776)
+.+-+.|. +-+.|||-+.+-++.-+.|+=...+.-|.. |..++... ....-. .. ..........|++||+
T Consensus 48 ~r~~i~pg--gl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc---~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDv 122 (493)
T 2d5f_A 48 SKRTLNRN--GLHLPSYSPYPQMIIVVQGKGAIGFAFPGC---PETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDV 122 (493)
T ss_dssp EEEEECTT--EEEEEEECSSCEEEEEEECEEEEEECCTTC---CCCEEECC-------------CSEEESCEEEEETTEE
T ss_pred EEEEeCCC--cEeCceecCCCeEEEEEeCEEEEEEEeCCC---ccccccccccccccccccccccccccceEEEecCCCE
Confidence 44555554 345799988887766677777776664321 11111000 000000 00 0000013459999999
Q ss_pred eeeCCCCceeeeeCCC
Q 004048 537 LYIPRGFSHEACTEDD 552 (776)
Q Consensus 537 LYIPRGwwH~a~A~de 552 (776)
+|||+|..|+....++
T Consensus 123 i~iPaG~~h~~~N~g~ 138 (493)
T 2d5f_A 123 LVIPPGVPYWTYNTGD 138 (493)
T ss_dssp EEECTTCCEEEEECSS
T ss_pred EEECCCCcEEEEeCCC
Confidence 9999999999999865
No 121
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=82.21 E-value=11 Score=37.73 Aligned_cols=102 Identities=22% Similarity=0.249 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhhhCC----C-cccceeEEcCCCCCcccccccC----C--CeEEEEEeeeEEEEEecCCCCCCCCCCCCC
Q 004048 443 CLANIADGLASLFGQ----P-SVGANMYLTPPNSQGLASHYDD----H--CVFVCQLFGTKQWKIFAQPSVQLPRLYNPC 511 (776)
Q Consensus 443 ~LaeL~~aLe~~FG~----P-~v~aNaYlTPpg~qGf~pHyD~----~--DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf 511 (776)
.+.++++.++...|+ | .+-+|.|- +| +++++|.|. + -+..+-+-+.....+..... .
T Consensus 85 ~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~--~G-~~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~~-~-------- 152 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDFQPDACLINRYA--PG-AKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKR-N-------- 152 (211)
T ss_dssp HHHHHHHHHHHHTTCTTCCCCEEEEEEEC--TT-CCEEEECCCCCSCTTSCEEEEEEESCEEEEECCSST-T--------
T ss_pred HHHHHHHHHHHhcCCCCcCCCEEEEEEEc--CC-CCcccccCCCccccCCCEEEEECCCCeEEEEecccC-C--------
Confidence 577777776655443 2 34677775 33 489999993 2 25577777788888765211 0
Q ss_pred CCCCCcccccccccceEEEEcCCcEeeeC---CCCceeeeeCCCccCC-CccceeEEEeec
Q 004048 512 DIVNGVEAESSMAECRQFLLREGDILYIP---RGFSHEACTEDDGRTG-LAEFSLHLTLGV 568 (776)
Q Consensus 512 ~p~~~~~dd~g~~~~~evvLePGDVLYIP---RGwwH~a~A~deg~~~-~~~~SLHLT~SI 568 (776)
. +...+.|++||+|.++ +-|+|.+.....+..+ ..+.-+.|||-.
T Consensus 153 ~------------~~~~i~L~~GsllvM~G~~r~~~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 153 D------------PLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp S------------CCEEEEECTTCEEEECGGGTTCCEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred C------------ceEEEECCCCCEEEECchHHceEeccCcccCCcCCCCCCCEEEEEeee
Confidence 0 1267899999999998 4477777665432100 112356667654
No 122
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=82.08 E-value=4.6 Score=46.03 Aligned_cols=105 Identities=13% Similarity=0.188 Sum_probs=64.8
Q ss_pred cceeEEcCCCCCcccccccCCCeEE--E-EEeeeEEEEEecCCCCC---------CCCCC-CCCCCCCCccccc--cccc
Q 004048 461 GANMYLTPPNSQGLASHYDDHCVFV--C-QLFGTKQWKIFAQPSVQ---------LPRLY-NPCDIVNGVEAES--SMAE 525 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~DVFV--l-QL~GrKrWrL~~pp~~~---------lPr~~-~pf~p~~~~~dd~--g~~~ 525 (776)
...+|+..++ ..++.|.++++... + -.-|.|.|-.-|..... .+... ..+-+ ...+. ..-+
T Consensus 261 ~pqLYig~~g-S~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~k~e~l~~k~~~~~~~~~~~~---~p~~L~~~gIP 336 (531)
T 3avr_A 261 TVQLYMKVPG-SRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWGVLNDFCEKNNLNFLMGSWWP---NLEDLYEANVP 336 (531)
T ss_dssp SCEEEEECTT-CEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCC---CHHHHHHTTCC
T ss_pred hhheEeecCc-ccccceecCCcceeeEeecCCCCeEEEEeCHHHHHHHHHHHHHcCCChhhceeec---CHHHHHhCCCC
Confidence 4559999884 56899999987543 2 34468889887642210 00000 01101 11111 2236
Q ss_pred ceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHHHH
Q 004048 526 CRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEGFA 580 (776)
Q Consensus 526 ~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~l~ 580 (776)
+..++=+|||.+|+++|..|++.+.+ .+. ..++++ +|.+|.-+.
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G--------~~~--n~awN~-a~~~~~q~~ 380 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIG--------WCN--NIAWNV-GPLTACQYK 380 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS--------SEE--EEEEEE-CCSSHHHHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecc--------eee--eeEEEe-ccCchHHHH
Confidence 78899999999999999999999975 344 445554 355676543
No 123
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=81.91 E-value=2.6 Score=47.06 Aligned_cols=84 Identities=17% Similarity=0.167 Sum_probs=46.3
Q ss_pred eEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCC-CCCCCCCcccccccccceEEEEcCCcEeeeCCC
Q 004048 464 MYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYN-PCDIVNGVEAESSMAECRQFLLREGDILYIPRG 542 (776)
Q Consensus 464 aYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~-pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG 542 (776)
+-+.|. +-+.|||-+.+-++.-+.|+=...+-.|.. |..|. +............+.......|++||++|||+|
T Consensus 68 ~~i~pg--gl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~---~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG 142 (459)
T 2e9q_A 68 HTIRPK--GLLLPGFSNAPKLIFVAQGFGIRGIAIPGC---AETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPAG 142 (459)
T ss_dssp EEECTT--EEEEEEEESSCEEEEEEECEEEEEECCTTC---CCCEEECCC-------CCCEEECCCEEEETTEEEEECTT
T ss_pred EEEcCC--CEecceecCCceEEEEEeeEEEEEEEeCCC---cchhccchhhccccccccccccceeEEecCCCEEEECCC
Confidence 445443 345799987777766667766666653321 11110 000000000000000112458999999999999
Q ss_pred CceeeeeCCC
Q 004048 543 FSHEACTEDD 552 (776)
Q Consensus 543 wwH~a~A~de 552 (776)
..|+....++
T Consensus 143 ~~H~~~N~g~ 152 (459)
T 2e9q_A 143 VSHWMYNRGQ 152 (459)
T ss_dssp CCEEEEECSS
T ss_pred CCEEEEeCCC
Confidence 9999998864
No 124
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=81.74 E-value=2.1 Score=44.14 Aligned_cols=48 Identities=10% Similarity=0.167 Sum_probs=35.5
Q ss_pred cccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 477 HYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 477 HyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
|....+-|+.-++|+=+.++.. .+.+|+|||.+|+|+|..|..+..++
T Consensus 86 h~H~~eE~~~Vl~G~l~v~v~g----------------------------~~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 86 QDPNAEAVLFVVEGELSLTLQG----------------------------QVHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp CCTTEEEEEEEEESCEEEEESS----------------------------CEEEECTTEEEEECTTCCEEEECCSS
T ss_pred cCCCceEEEEEEeCEEEEEECC----------------------------EEEEECCCCEEEECCCCcEEEEECCC
Confidence 4334455666788876665532 34599999999999999999998754
No 125
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=81.45 E-value=0.81 Score=42.84 Aligned_cols=57 Identities=9% Similarity=-0.114 Sum_probs=39.5
Q ss_pred CCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCcee-eee
Q 004048 471 SQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHE-ACT 549 (776)
Q Consensus 471 ~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~-a~A 549 (776)
+..+++|.-..+..++-++|+-+ . .... .+ ...+++|||.+|+|+|..|. +.+
T Consensus 54 G~~~p~H~H~~~ee~~VL~G~~~--~-~~g~--~~---------------------~~~~~~~Gd~~~~p~g~~H~p~~~ 107 (145)
T 2o1q_A 54 GSSFAAHVHVGPGEYFLTKGKMD--V-RGGK--AA---------------------GGDTAIAPGYGYESANARHDKTEF 107 (145)
T ss_dssp TEEECCEEESSCEEEEEEEEEEE--E-TTCG--GG---------------------TSEEEESSEEEEECTTCEESCCEE
T ss_pred CCCCCccCCCCCEEEEEEEeEEE--E-cCCC--Ee---------------------cceEeCCCEEEEECcCCccCCeEC
Confidence 45688999888877788888755 2 1100 00 13489999999999999999 554
Q ss_pred CCCc
Q 004048 550 EDDG 553 (776)
Q Consensus 550 ~deg 553 (776)
.++|
T Consensus 108 ~e~~ 111 (145)
T 2o1q_A 108 PVAS 111 (145)
T ss_dssp EEEE
T ss_pred CCCe
Confidence 4443
No 126
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=81.45 E-value=4.3 Score=45.51 Aligned_cols=86 Identities=14% Similarity=0.208 Sum_probs=45.0
Q ss_pred ceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCC--CCCCcccccccccceEEEEcCCcEeee
Q 004048 462 ANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCD--IVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 462 aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~--p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
+.+-+.|. +-+.|||-+.+-++.-+.|+=...+-.|.. |..|+... ..........+.......|++||++||
T Consensus 51 ~r~~l~Pg--gl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~---~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~i 125 (476)
T 1fxz_A 51 SRCTLNRN--ALRRPSYTNGPQEIYIQQGKGIFGMIYPGC---PSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAV 125 (476)
T ss_dssp EEEEECTT--EEEEEEEESSCEEEEEEECCEEEEEECTTC---CCC------------------CCCCEEEECTTEEEEE
T ss_pred EEEEEcCC--CEecceecCCceEEEEEecEEEEEEEcCCC---cchhhccccccccccccccccccceEEEEeCCCEEEE
Confidence 34455553 345688877776555555655555554321 11111000 000000000000113568999999999
Q ss_pred CCCCceeeeeCCC
Q 004048 540 PRGFSHEACTEDD 552 (776)
Q Consensus 540 PRGwwH~a~A~de 552 (776)
|+|..|+....++
T Consensus 126 PaG~~h~~~N~G~ 138 (476)
T 1fxz_A 126 PTGVAWWMYNNED 138 (476)
T ss_dssp CTTCEEEEEECSS
T ss_pred CCCCcEEEEeCCC
Confidence 9999999999864
No 127
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=81.10 E-value=1.3 Score=49.00 Aligned_cols=94 Identities=19% Similarity=0.174 Sum_probs=70.3
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchh----hHHHHHhhhhhcccc--
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEK----RVLVAAANAVLDLST-- 139 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~----~v~~~a~n~vld~s~-- 139 (776)
.+=.|+.+|+.+... ++-..++-+++..|..+-|...+|..+.+.+..|+.+|.+.+. .|.+.||.++-++|.
T Consensus 287 aI~~LV~lLl~s~~~-~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~ 365 (458)
T 3nmz_A 287 SVKALMECALEVKKE-STLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLI 365 (458)
T ss_dssp HHHHHHHHHTTCCSH-HHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCH-HHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcc
Confidence 334455555655544 5666666666666554445557787789999999999998775 399999999999995
Q ss_pred --chhhhhhhhcchhHHHHHHHH
Q 004048 140 --TSVGRQKLLESSALEALLLIF 160 (776)
Q Consensus 140 --t~~~~~~l~~~~~l~~~~~~~ 160 (776)
+.-.|+.+.+..+++.|+.+.
T Consensus 366 a~~~~~~~~i~~~G~i~~Lv~LL 388 (458)
T 3nmz_A 366 ATNEDHRQILRENNCLQTLLQHL 388 (458)
T ss_dssp TTCHHHHHHHHHTTHHHHHHHHS
T ss_pred cCCHHHHHHHHHcccHHHHHHHH
Confidence 888899999999999888543
No 128
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=80.91 E-value=2.1 Score=45.61 Aligned_cols=92 Identities=18% Similarity=0.237 Sum_probs=69.1
Q ss_pred hhHHHHHHHhhcCCCC---CccchhHHHhhhhhh--hhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc-
Q 004048 66 PILSLLPVLLNSKCSG---GIAGLSAEIVGAASL--LSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST- 139 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~---~~a~~s~e~~g~a~l--~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~- 139 (776)
+.+..|.-||.+.+.+ +|...++-++...|. ..-+.|-+...|.+.+..|+.+|++++.+|.+.||-++-++++
T Consensus 214 Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~ 293 (354)
T 3nmw_A 214 GALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSAR 293 (354)
T ss_dssp THHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSS
T ss_pred CcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCC
Confidence 3455566677766552 144444444443332 1246777888899999999999999999999999999999995
Q ss_pred chhhhhhhhcchhHHHHH
Q 004048 140 TSVGRQKLLESSALEALL 157 (776)
Q Consensus 140 t~~~~~~l~~~~~l~~~~ 157 (776)
+.-.++.+.+.-++|.|.
T Consensus 294 ~~~~~~~i~~~G~i~~Lv 311 (354)
T 3nmw_A 294 NPKDQEALWDMGAVSMLK 311 (354)
T ss_dssp CHHHHHHHHHTTHHHHHH
T ss_pred CHHHHHHHHHCCCHHHHH
Confidence 677888898888888887
No 129
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=80.69 E-value=6.7 Score=42.94 Aligned_cols=77 Identities=18% Similarity=0.176 Sum_probs=58.7
Q ss_pred CccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccc-hhhhhhhhcchhHHHHHHH
Q 004048 82 GIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTT-SVGRQKLLESSALEALLLI 159 (776)
Q Consensus 82 ~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t-~~~~~~l~~~~~l~~~~~~ 159 (776)
.+-..+|-+++-.|--+- .+-+.-.+.+.+..|+.+|.+++..|-+.|+-|+-+++.. .-.|..+.+.-+++.++.+
T Consensus 135 ~~q~~Aa~aL~nia~~~~-~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~l 212 (529)
T 3tpo_A 135 PIQFESAWALTNIASGTS-EQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLAL 212 (529)
T ss_dssp HHHHHHHHHHHHHHTSCH-HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCH-HHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHH
Confidence 555566666665443322 2345667889999999999999999999999999999874 5678888888888888743
No 130
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=80.66 E-value=3.8 Score=41.27 Aligned_cols=26 Identities=12% Similarity=0.181 Sum_probs=23.2
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
....|+|||.+|+|++..|..++.++
T Consensus 204 ~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 204 NYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 55699999999999999999998765
No 131
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=79.89 E-value=5.3 Score=38.95 Aligned_cols=63 Identities=16% Similarity=0.251 Sum_probs=42.2
Q ss_pred CCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeee
Q 004048 471 SQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACT 549 (776)
Q Consensus 471 ~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A 549 (776)
+++.++|--.. .-++-.+.|+=+=++|..+. ..| + ...+.+|.|||+.|.|+|.+|.+..
T Consensus 79 Gq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~-~~~--------------~----~~~~~~l~~G~~~~~~~~~iH~V~N 139 (171)
T 3eqe_A 79 NKETTVHDHGQSIGCAMVLEGKLLNSIYRSTG-EHA--------------E----LSNSYFVHEGECLISTKGLIHKMSN 139 (171)
T ss_dssp TCBCCEECCTTCEEEEEEEESEEEEEEEEECS-SSE--------------E----EEEEEEEETTCEEEECTTCEEEEEC
T ss_pred CCCcccccCCCceEEEEEEeeeEEEEEeecCC-Cce--------------e----ecceEEeCCCcEEEeCCCCEEEEEC
Confidence 56778875442 34666777877766665211 000 0 1256799999999999999999988
Q ss_pred CCC
Q 004048 550 EDD 552 (776)
Q Consensus 550 ~de 552 (776)
.++
T Consensus 140 ~~~ 142 (171)
T 3eqe_A 140 PTS 142 (171)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 132
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=79.14 E-value=6.4 Score=39.21 Aligned_cols=65 Identities=20% Similarity=0.191 Sum_probs=44.5
Q ss_pred CCcccccccC-CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee-CCCCceeee
Q 004048 471 SQGLASHYDD-HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI-PRGFSHEAC 548 (776)
Q Consensus 471 ~qGf~pHyD~-~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI-PRGwwH~a~ 548 (776)
|++.++|--. ...++--+.|+=+=++|..++... .++ ....+.+|.|||+-|+ |++-+|.+.
T Consensus 80 Gq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~-------~~l---------~~~~~~~l~~G~v~~~~~~~giH~V~ 143 (200)
T 3eln_A 80 GHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKS-------NEM---------IKKSERTLRENQCAYINDSIGLHRVE 143 (200)
T ss_dssp TCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSC-------CCC---------CEEEEEEECTTCEEEECTTTCEEEEE
T ss_pred CCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCc-------ccc---------cccceEEeCCCCEEEecCCCcEEEEE
Confidence 5777888555 346777788888888776432110 000 1225679999999999 888899998
Q ss_pred eCC
Q 004048 549 TED 551 (776)
Q Consensus 549 A~d 551 (776)
..+
T Consensus 144 N~s 146 (200)
T 3eln_A 144 NVS 146 (200)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 133
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=78.51 E-value=3.6 Score=41.25 Aligned_cols=73 Identities=12% Similarity=0.108 Sum_probs=47.2
Q ss_pred ccceeEEcCCCCCcccccccCCCeEEEEEe-ee-EEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEe
Q 004048 460 VGANMYLTPPNSQGLASHYDDHCVFVCQLF-GT-KQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDIL 537 (776)
Q Consensus 460 v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~-Gr-KrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVL 537 (776)
+++|..++++ +.-=|.||-...=++.-+. |+ ....+-- | .+|. .+ .+..++|.++-.|
T Consensus 60 ~Q~n~S~s~~-GvlRGlH~h~q~Klv~~~~~G~v~dV~VDl-------R-~SpT---------fg--~~~~v~Ls~~~~L 119 (197)
T 1nxm_A 60 LQNNVSFSRK-NVLRGLHAEPWDKYISVADGGKVLGTWVDL-------R-EGET---------FG--NTYQTVIDASKSI 119 (197)
T ss_dssp CEEEEEEEET-TBEEEEEECSSCEEEEECSSCCEEEEEEEC-------B-SSTT---------TT--CEEEEEECTTEEE
T ss_pred EEEEEEECCC-CCcceeeecccceEEEEcCCCEEEEEEEEC-------C-CCCC---------CC--eEEEEEeCCCcEE
Confidence 6888888865 3334788855444555555 55 3333321 1 1110 12 2367789999999
Q ss_pred eeCCCCceeeeeCCC
Q 004048 538 YIPRGFSHEACTEDD 552 (776)
Q Consensus 538 YIPRGwwH~a~A~de 552 (776)
|||+|+||.-.+.++
T Consensus 120 ~IP~G~aHgf~~lsd 134 (197)
T 1nxm_A 120 FVPRGVANGFQVLSD 134 (197)
T ss_dssp EECTTEEEEEEECSS
T ss_pred EeCCCeEEEEEeccC
Confidence 999999999999876
No 134
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=78.43 E-value=4.9 Score=43.79 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=23.4
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
..+..++||+++||++.||.-.+.++
T Consensus 317 ~~~~w~~gD~fvvP~w~~h~~~n~~~ 342 (368)
T 3nw4_A 317 ETTKLEKGDMFVVPSWVPWSLQAETQ 342 (368)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESSS
T ss_pred EEEEecCCCEEEECCCCcEEEEeCCC
Confidence 56799999999999999999998755
No 135
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=78.13 E-value=0.83 Score=40.29 Aligned_cols=26 Identities=19% Similarity=0.238 Sum_probs=22.7
Q ss_pred EEEEcCCcEeeeCCCCceeeeeCCCc
Q 004048 528 QFLLREGDILYIPRGFSHEACTEDDG 553 (776)
Q Consensus 528 evvLePGDVLYIPRGwwH~a~A~deg 553 (776)
+..|+|||+.|+|+|..|.....++.
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g~~ 85 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNESTA 85 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECSSS
T ss_pred EEEECCCCEEEECCCCceeCEECCCC
Confidence 34899999999999999999997653
No 136
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=78.06 E-value=2.7 Score=42.38 Aligned_cols=49 Identities=22% Similarity=0.220 Sum_probs=36.7
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
++...|+ .+-|+.-++|+=..++.. .+.+|+|||.+|+|+|..|..++.
T Consensus 61 ~~~~~~~--~ee~~~Vl~G~~~~~~~~----------------------------~~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 61 AQATESV--YQRFAFVLSGEVDVAVGG----------------------------ETRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp CEEECCS--SEEEEEEEEEEEEEECSS----------------------------CEEEECTTEEEEECTTCCCEEEEE
T ss_pred CcCCCCc--eeEEEEEEECEEEEEECC----------------------------EEEEECCCCEEEECCCCCEEEEeC
Confidence 3456676 666776788876555421 345999999999999999999886
No 137
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=77.66 E-value=11 Score=35.85 Aligned_cols=80 Identities=14% Similarity=0.166 Sum_probs=49.8
Q ss_pred eEEcCCCC-CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcE-eeeCC
Q 004048 464 MYLTPPNS-QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDI-LYIPR 541 (776)
Q Consensus 464 aYlTPpg~-qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDV-LYIPR 541 (776)
+|-+|+|. .|...|-... =+++-+.|+=+..+... . +..+++|.+.+. ||||+
T Consensus 39 ~~~~~~g~~RG~H~Hk~~~-q~li~l~Gs~~v~ldDg-~-----------------------~~~~~~L~~~~~gL~Ipp 93 (141)
T 2pa7_A 39 IFDTKGEEPRGFHAHKKLE-QVLVCLNGSCRVILDDG-N-----------------------IIQEITLDSPAVGLYVGP 93 (141)
T ss_dssp EESCCSSCCEEEEEESSCC-EEEEEEESCEEEEEECS-S-----------------------CEEEEEECCTTEEEEECT
T ss_pred EEecCCCCEECcCcCCCce-EEEEEEccEEEEEEECC-c-----------------------EEEEEEECCCCcEEEeCC
Confidence 34344533 3334444444 45666899999988542 1 014556665554 99999
Q ss_pred CCceeeeeCCCccCCCccceeEEEeeccccCcch
Q 004048 542 GFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFE 575 (776)
Q Consensus 542 GwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~ 575 (776)
|+||.....+++ |+=+-++-+...|..
T Consensus 94 gvWh~~~~~s~~-------avllvlas~~Yd~~d 120 (141)
T 2pa7_A 94 AVWHEMHDFSSD-------CVMMVLASDYYDETD 120 (141)
T ss_dssp TCEEEEECCCTT-------CEEEEEESSCCCGGG
T ss_pred CEEEEEEEcCCC-------eEEEEECCCCcCHHH
Confidence 999999998762 666677666555543
No 138
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=77.40 E-value=12 Score=37.98 Aligned_cols=111 Identities=18% Similarity=0.245 Sum_probs=68.9
Q ss_pred cCcHHHHHHHHHHHhhhCC-C-cccceeEEcCCCCCcccccccCC-------CeEEEEEeeeEEEEEecCCCCCCCCCCC
Q 004048 439 FRFECLANIADGLASLFGQ-P-SVGANMYLTPPNSQGLASHYDDH-------CVFVCQLFGTKQWKIFAQPSVQLPRLYN 509 (776)
Q Consensus 439 ~~~p~LaeL~~aLe~~FG~-P-~v~aNaYlTPpg~qGf~pHyD~~-------DVFVlQL~GrKrWrL~~pp~~~lPr~~~ 509 (776)
.|.+.+..+.+.++..+|. | .+-+|.|- +|+.++++|.|+. -+..|=+-+.....+....... ..
T Consensus 105 ~wp~~l~~l~~~~~~~~g~~~n~~LvN~Y~--~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~----~~ 178 (238)
T 2iuw_A 105 HWHPVLRTLKNRIEENTGHTFNSLLCNLYR--NEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPE----EN 178 (238)
T ss_dssp SCCHHHHHHHHHHHHHHSCCCCEEEEEEEC--STTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC--------
T ss_pred CCCHHHHHHHHHHHHHhCCCCCEEEEEEEC--CCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCcc----cc
Confidence 4556777888888877775 2 35788885 4344899999974 3556778888888887632100 00
Q ss_pred CCCCCCCcccccccccceEEEEcCCcEeeeCCC----CceeeeeCCCccCCCccceeEEEeec
Q 004048 510 PCDIVNGVEAESSMAECRQFLLREGDILYIPRG----FSHEACTEDDGRTGLAEFSLHLTLGV 568 (776)
Q Consensus 510 pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG----wwH~a~A~deg~~~~~~~SLHLT~SI 568 (776)
- +....+...+.|++||+|.+... |-|.+..... ..+.-+.|||--
T Consensus 179 -~--------~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~----~~~~RIsLTfR~ 228 (238)
T 2iuw_A 179 -G--------DYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYH----SREPRVNLTFRT 228 (238)
T ss_dssp -------------CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSS----CCCCEEEEEEEC
T ss_pred -C--------cccCCceEEEEcCCCCEEEEChhhhCccEecCCCcCC----CCCCEEEEEeee
Confidence 0 00001237889999999999965 4476654311 123566667653
No 139
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=77.29 E-value=2.1 Score=43.49 Aligned_cols=83 Identities=14% Similarity=0.146 Sum_probs=62.1
Q ss_pred HHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhh-cchhhHHHHHhhhhhccccchhhhhhhhcc
Q 004048 72 PVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLR-NSEKRVLVAAANAVLDLSTTSVGRQKLLES 150 (776)
Q Consensus 72 p~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~-~~~~~v~~~a~n~vld~s~t~~~~~~l~~~ 150 (776)
=-||.|.+. ++-..+|..++-.|.-+ +.|-..-.+.+.+..|+.+|+ +++..|.+.|+-++.+||...-.|..+.+
T Consensus 58 V~lL~s~~~-~vq~~Aa~aL~nLa~~~-~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i~~- 134 (233)
T 3tt9_A 58 LQLLKVQNE-DVQRAVCGALRNLVFED-NDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMIT- 134 (233)
T ss_dssp HHGGGCCCH-HHHHHHHHHHHHHHTTC-HHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHH-
T ss_pred HHHHcCCCH-HHHHHHHHHHHHHHhCC-HHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHHHh-
Confidence 334566555 66666666665555433 345556667899999999998 57899999999999999999999988876
Q ss_pred hhHHHHH
Q 004048 151 SALEALL 157 (776)
Q Consensus 151 ~~l~~~~ 157 (776)
.+++.|+
T Consensus 135 ~~i~~Lv 141 (233)
T 3tt9_A 135 EALLTLT 141 (233)
T ss_dssp HHHHHHC
T ss_pred ccHHHHH
Confidence 4777776
No 140
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=76.88 E-value=3 Score=40.80 Aligned_cols=56 Identities=20% Similarity=0.259 Sum_probs=40.1
Q ss_pred CCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceee
Q 004048 468 PPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEA 547 (776)
Q Consensus 468 Ppg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a 547 (776)
+|| +..++|.-...-|++-++|+=+..+.. + .+.+|+|||.+ +|+|..|..
T Consensus 87 ~PG-~~~~~H~H~~eE~~~VLeGel~l~ld~-----------------------g----e~~~L~~GDsi-~~~g~~H~~ 137 (172)
T 3es1_A 87 LPG-KESPMHRTNSIDYGIVLEGEIELELDD-----------------------G----AKRTVRQGGII-VQRGTNHLW 137 (172)
T ss_dssp CTT-CBCCCBCCSEEEEEEEEESCEEEECGG-----------------------G----CEEEECTTCEE-EECSCCBEE
T ss_pred CCC-CCCCCeecCceEEEEEEeCEEEEEECC-----------------------C----eEEEECCCCEE-EeCCCcEEE
Confidence 443 456788766545667788876665431 0 34589999999 999999999
Q ss_pred eeCCC
Q 004048 548 CTEDD 552 (776)
Q Consensus 548 ~A~de 552 (776)
+..++
T Consensus 138 ~N~g~ 142 (172)
T 3es1_A 138 RNTTD 142 (172)
T ss_dssp ECCSS
T ss_pred EeCCC
Confidence 98754
No 141
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=76.77 E-value=8.6 Score=37.72 Aligned_cols=76 Identities=14% Similarity=0.043 Sum_probs=49.6
Q ss_pred cccceeEEcCCCCCcccccccCC-CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEc---CC
Q 004048 459 SVGANMYLTPPNSQGLASHYDDH-CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLR---EG 534 (776)
Q Consensus 459 ~v~aNaYlTPpg~qGf~pHyD~~-DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLe---PG 534 (776)
.+++|.+.+.+|. -=|.||-.. .=++.-+.|+=.-.+..-.. .-|. .| .+..++|. ++
T Consensus 52 f~Q~n~s~s~~Gv-lRG~H~h~~q~klv~~v~G~v~dv~vD~R~-~SpT--------------fg--~~~~v~Ls~~~n~ 113 (174)
T 3ejk_A 52 FGEIYFSEVLPRR-VKAWKRHSLMTQLFAVPVGCIHVVLYDGRE-KSPT--------------SG--RLAQVTLGRPDNY 113 (174)
T ss_dssp CCEEEEEEECBTC-EEEEEEESSCCEEEEEEESEEEEEEECCCT-TCTT--------------TT--CEEEEEEETTTBC
T ss_pred eeEEEEEECCCCC-EECcEecCCCceEEEEEeeEEEEEEEeCCC-CCCC--------------CC--eEEEEEECCccCc
Confidence 3688888887743 346777653 33556667877766654211 1110 12 24677887 67
Q ss_pred cEeeeCCCCceeeeeCCC
Q 004048 535 DILYIPRGFSHEACTEDD 552 (776)
Q Consensus 535 DVLYIPRGwwH~a~A~de 552 (776)
-.||||+|+||.-.+.++
T Consensus 114 ~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 114 RLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEEEECTTCEEEEEECTT
T ss_pred eEEEeCCCcEEEEEEccC
Confidence 899999999999999865
No 142
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=76.57 E-value=6.1 Score=42.96 Aligned_cols=117 Identities=11% Similarity=0.111 Sum_probs=73.8
Q ss_pred cceeEEcCCCCCcccccccCCCeEE--EEEeee-EEEEEecCCCC---------CCCCCC---CCCCCC-CC--cccc--
Q 004048 461 GANMYLTPPNSQGLASHYDDHCVFV--CQLFGT-KQWKIFAQPSV---------QLPRLY---NPCDIV-NG--VEAE-- 520 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~DVFV--lQL~Gr-KrWrL~~pp~~---------~lPr~~---~pf~p~-~~--~~dd-- 520 (776)
...+|+... ...|+.|.++++... ....|. |.|-.-|+... ..|..+ ..|..- .. .+..
T Consensus 177 tP~LYiGm~-~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~lisP~~L~ 255 (354)
T 3dxt_A 177 TPYLYFGMW-KTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLK 255 (354)
T ss_dssp CCEEEEECT-TCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGCCEEECHHHHH
T ss_pred ceeeeeccc-cCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCchhhhhcHHHHhcCcccCCHHHHH
Confidence 445999988 457899999998753 466676 99999875321 011100 011000 00 0011
Q ss_pred cccccceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHHHHHHHHHHhhh
Q 004048 521 SSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEGFAHVALCCWNQ 589 (776)
Q Consensus 521 ~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~l~~~Al~~~~~ 589 (776)
...-++..++=+|||.++.-||..|.+.+.+-+ +.-+++|. +..|..+...|..+-+.
T Consensus 256 ~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn----------~aEAvNFA-~~~Wl~~g~~A~~C~C~ 313 (354)
T 3dxt_A 256 ENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFN----------CAEAINFA-TPRWIDYGKMASQCSCG 313 (354)
T ss_dssp HTTCCCEEEEECTTCEEEECTTCEEEEEESSSE----------EEEEEEEC-CGGGHHHHHHCCCCCSS
T ss_pred HCCCceEEEEeCCCcEEEECCCceEEEeecccc----------HhHhhccC-cHHHHHhhhhccccccc
Confidence 112356889999999999999999999997642 35566664 55798777777555443
No 143
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=76.24 E-value=7.5 Score=40.16 Aligned_cols=135 Identities=24% Similarity=0.166 Sum_probs=76.3
Q ss_pred hHHHHHHHHHhccCCCchHHHHHHHHhhhhccccCCCCCCCchhhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhh
Q 004048 23 SIFAILVAALSNSNNNYSEFIIKKCLNRLRLSLLSQSQPTLPIPILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETN 102 (776)
Q Consensus 23 ~~f~~l~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~~~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~ 102 (776)
.+.+.|+..+.+..++....-.=.+|..+-....+......-..++..|--+|.+... .+...++.+++-.+-..-+ +
T Consensus 149 ~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~-~v~~~a~~~L~~l~~~~~~-~ 226 (450)
T 2jdq_A 149 NILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDT-DVLADACWALSYLSDGPND-K 226 (450)
T ss_dssp TCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTCCCH-HHHHHHHHHHHHHTSSSHH-H
T ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHccCCH-HHHHHHHHHHHHHHCCCcH-H
Confidence 3567777777543333333333344554442221111011112333333334444444 5666666666655543222 2
Q ss_pred hhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccchhh-hhhhhcchhHHHHHHH
Q 004048 103 EQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTTSVG-RQKLLESSALEALLLI 159 (776)
Q Consensus 103 e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t~~~-~~~l~~~~~l~~~~~~ 159 (776)
-+...+.+++..|+.+|...+..|..+||.++-.++...-. ++.+.+..+++.++.+
T Consensus 227 ~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~l 284 (450)
T 2jdq_A 227 IQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHL 284 (450)
T ss_dssp HHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHH
Confidence 33344678999999999999999999999999999876443 3445666677766633
No 144
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=75.96 E-value=3.7 Score=45.48 Aligned_cols=92 Identities=18% Similarity=0.237 Sum_probs=69.2
Q ss_pred hhHHHHHHHhhcCCCC---CccchhHHHhhhhhh--hhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc-
Q 004048 66 PILSLLPVLLNSKCSG---GIAGLSAEIVGAASL--LSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST- 139 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~---~~a~~s~e~~g~a~l--~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~- 139 (776)
+.+..|.-||.+.+.+ +|...+|-++...|. ..-+.|-+...|.+.+..|+.+|.+++..|-+.||-++-++++
T Consensus 330 Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~ 409 (458)
T 3nmz_A 330 GALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSAR 409 (458)
T ss_dssp THHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSS
T ss_pred CcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcC
Confidence 4566666777776652 155555555544332 1356677788899999999999999999999999999999995
Q ss_pred chhhhhhhhcchhHHHHH
Q 004048 140 TSVGRQKLLESSALEALL 157 (776)
Q Consensus 140 t~~~~~~l~~~~~l~~~~ 157 (776)
+.-.++.+.+.-+++.|.
T Consensus 410 ~~~~~~~i~~~G~I~~Lv 427 (458)
T 3nmz_A 410 NPKDQEALWDMGAVSMLK 427 (458)
T ss_dssp CHHHHHHHHHHTHHHHHH
T ss_pred CHHHHHHHHHCCCHHHHH
Confidence 677788888888888777
No 145
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=75.37 E-value=7.1 Score=43.06 Aligned_cols=27 Identities=37% Similarity=0.581 Sum_probs=23.5
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCCc
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDDG 553 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~deg 553 (776)
...+|++||++|||+|..|+....+++
T Consensus 86 ~~~~l~~GDv~~~P~G~~h~~~N~g~~ 112 (418)
T 3s7i_A 86 KSFNLDEGHALRIPSGFISYILNRHDN 112 (418)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECCSS
T ss_pred EEEEecCCCEEEECCCCeEEEEecCCC
Confidence 456999999999999999999997643
No 146
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=74.64 E-value=8.7 Score=38.76 Aligned_cols=65 Identities=17% Similarity=0.106 Sum_probs=46.0
Q ss_pred CCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCC--Cce
Q 004048 468 PPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRG--FSH 545 (776)
Q Consensus 468 Ppg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG--wwH 545 (776)
+| |++.++|--....++.-+.|+=+=++|..++...+ .+ . ..+.+|.|||+.|++++ .+|
T Consensus 81 ~P-Gq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~------~~-------~----~~~~~l~~G~v~~~~p~~g~IH 142 (211)
T 3uss_A 81 GP-GQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRP------HP-------S----GARRRLEPGEVEALSPRIGDVH 142 (211)
T ss_dssp CT-TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCE------EE-------C----SCCEEECTTCEEEEBTTTBCCE
T ss_pred CC-CCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCc------cc-------c----cceEEecCCCEEEECCCCCCEE
Confidence 35 57789987777788889999888887763221100 00 0 13469999999999987 899
Q ss_pred eeeeC
Q 004048 546 EACTE 550 (776)
Q Consensus 546 ~a~A~ 550 (776)
.+...
T Consensus 143 ~V~N~ 147 (211)
T 3uss_A 143 QVSNA 147 (211)
T ss_dssp EEEES
T ss_pred EEccC
Confidence 99954
No 147
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=73.74 E-value=11 Score=37.91 Aligned_cols=75 Identities=19% Similarity=0.308 Sum_probs=48.9
Q ss_pred cccceeEEc-CCCCCcccccccC----CCeEEEEEeee-EEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEc
Q 004048 459 SVGANMYLT-PPNSQGLASHYDD----HCVFVCQLFGT-KQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLR 532 (776)
Q Consensus 459 ~v~aNaYlT-Ppg~qGf~pHyD~----~DVFVlQL~Gr-KrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLe 532 (776)
.+++|..++ ++ +.-=|.||-. ..=++.-+.|+ ....+--... -|. | | .+..++|.
T Consensus 68 f~Q~n~S~S~~~-GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~--SpT----f----------g--~~~~~~Ls 128 (205)
T 3ryk_A 68 FVQDNVSYSAEA-GTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKD--SPT----F----------K--QWRGYILS 128 (205)
T ss_dssp CCEEEEEEESST-TBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTT--STT----T----------T--CEEEEEEE
T ss_pred eeEEEEEEeCCC-CcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCC--CCC----C----------C--eEEEEEec
Confidence 478998888 55 3333677764 45577777888 5544432111 110 1 1 23666776
Q ss_pred C--CcEeeeCCCCceeeeeCCC
Q 004048 533 E--GDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 533 P--GDVLYIPRGwwH~a~A~de 552 (776)
+ +-.||||+|+||.-.+.++
T Consensus 129 ~~n~~~L~IP~G~aHGF~~Lsd 150 (205)
T 3ryk_A 129 ADNHRQLLVPKGFAHGFCTLVP 150 (205)
T ss_dssp TTTCCEEEECTTEEEEEEECSS
T ss_pred CCCCCEEEeCCCceEEEEEcCC
Confidence 5 8999999999999999876
No 148
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=73.25 E-value=1.5 Score=46.11 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=20.2
Q ss_pred eEEEEcCCcEeeeCCCCceeeee
Q 004048 527 RQFLLREGDILYIPRGFSHEACT 549 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A 549 (776)
..+.|+|||.+|||+|.+|.--+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGEG 180 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEES
T ss_pred ceeECCCCCEEEcCCCCceEcCC
Confidence 56799999999999999998644
No 149
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=72.68 E-value=16 Score=36.14 Aligned_cols=75 Identities=17% Similarity=0.173 Sum_probs=45.9
Q ss_pred cccceeEEcCCCCCccccccc---CCCeEEEEEeee-EEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC-
Q 004048 459 SVGANMYLTPPNSQGLASHYD---DHCVFVCQLFGT-KQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE- 533 (776)
Q Consensus 459 ~v~aNaYlTPpg~qGf~pHyD---~~DVFVlQL~Gr-KrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP- 533 (776)
.+++|..++-+ +.-=|.||- ...=++.-+.|+ ....+--.. .-|. | | .+..++|.+
T Consensus 47 f~Q~n~S~s~~-GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~--~SpT----f----------g--~~~~~~Ls~~ 107 (185)
T 1ep0_A 47 FVQDNESMSVR-GVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRK--NSDT----Y----------G--EWTGVRLSDE 107 (185)
T ss_dssp CCEEEEEEEET-TBEEEEEEESSSCCCEEEEEEESEEEEEEEECCT--TCTT----T----------T--CEEEEEEETT
T ss_pred EEEEEEEeCcC-CeEecceecCCccccEEEEEeCCeEEEEEEECCC--CCCC----C----------C--eEEEEEecCC
Confidence 46888888764 322367776 334456667886 344333211 1111 1 1 135667765
Q ss_pred -CcEeeeCCCCceeeeeCCC
Q 004048 534 -GDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 534 -GDVLYIPRGwwH~a~A~de 552 (776)
+-.||||+|+||.-.+.++
T Consensus 108 n~~~L~IP~G~aHgf~~lsd 127 (185)
T 1ep0_A 108 NRREFFIPEGFAHGFLALSD 127 (185)
T ss_dssp TCCEEEECTTEEEEEEECSS
T ss_pred CCCEEEeCCCeEEEEEEcCC
Confidence 6899999999999999876
No 150
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=72.64 E-value=18 Score=36.52 Aligned_cols=78 Identities=12% Similarity=0.182 Sum_probs=48.1
Q ss_pred CcccceeEEcCCCCCcccccccC----CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC
Q 004048 458 PSVGANMYLTPPNSQGLASHYDD----HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE 533 (776)
Q Consensus 458 P~v~aNaYlTPpg~qGf~pHyD~----~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP 533 (776)
+.+++|.++|.+ +.-=|.||-. ..=+|.-+.|+=.=-+..- |..+| ..| .+..++|.+
T Consensus 42 ~fvQ~n~S~S~~-GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDl------R~~Sp---------TfG--~w~~v~Ls~ 103 (201)
T 4hn1_A 42 PVAQVNVAVSHR-GALRGINYTEIPPGQAKYSVCVRGAGLDVVVDV------RIGSP---------TFG--RWEIVPMDA 103 (201)
T ss_dssp CCCEEEEEEECT-TBEEEEEEECSSSCCCEEEEEEESEEEEEEECC------CBTCT---------TTT--CEEEEEEET
T ss_pred CeeEEEEEEcCC-CceEEEEecCCCCCceEEEEEeCCeEEEEEEEC------CCCCC---------CCC--eEEEEEecC
Confidence 357999999855 3233788864 4556666778732222211 11111 012 135567765
Q ss_pred --CcEeeeCCCCceeeeeCCCc
Q 004048 534 --GDILYIPRGFSHEACTEDDG 553 (776)
Q Consensus 534 --GDVLYIPRGwwH~a~A~deg 553 (776)
+-+||||+|+||--.++++.
T Consensus 104 en~~~l~IP~GfaHGF~~Lsd~ 125 (201)
T 4hn1_A 104 ERNTAVYLTAGLGRAFLSLTDD 125 (201)
T ss_dssp TTCCEEEECTTCEEEEEECSTT
T ss_pred CCCCEEEeCCcceEEEeecCCC
Confidence 88999999999999998763
No 151
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=72.57 E-value=3 Score=43.15 Aligned_cols=91 Identities=22% Similarity=0.185 Sum_probs=64.9
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc--chhh
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST--TSVG 143 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~--t~~~ 143 (776)
+++..|..+|.+... .+-..++.++|-.+-.+-+.- +...|.+++..|+.+|.+++.+|-..||.++-+++. +.-.
T Consensus 276 ~~l~~L~~ll~~~~~-~vr~~a~~~L~~l~~~~~~~~-~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~ 353 (450)
T 2jdq_A 276 SALQSLLHLLSSPKE-SIKKEACWTISNITAGNRAQI-QTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQ 353 (450)
T ss_dssp THHHHHHHHTTCSSH-HHHHHHHHHHHHHTTSCHHHH-HHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHH
T ss_pred ccHHHHHHHHcCCCH-HHHHHHHHHHHHHHcCCHHHH-HHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHH
Confidence 355556666776655 777778888877665332222 233467899999999999999999999999999976 3445
Q ss_pred hhhhhcchhHHHHHH
Q 004048 144 RQKLLESSALEALLL 158 (776)
Q Consensus 144 ~~~l~~~~~l~~~~~ 158 (776)
.+.+.+..+++.++.
T Consensus 354 ~~~l~~~~~i~~L~~ 368 (450)
T 2jdq_A 354 IKYLVELGCIKPLCD 368 (450)
T ss_dssp HHHHHHHTCHHHHHH
T ss_pred HHHHHHCCCHHHHHH
Confidence 555666667776663
No 152
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=72.50 E-value=9.1 Score=42.95 Aligned_cols=24 Identities=17% Similarity=0.248 Sum_probs=22.0
Q ss_pred EEEcCCcEeeeCCCCceeeeeCCC
Q 004048 529 FLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 529 vvLePGDVLYIPRGwwH~a~A~de 552 (776)
..|++||++|||+|+.|+....++
T Consensus 147 ~~l~~GDvi~iPaG~~~~~~N~g~ 170 (466)
T 3kgl_A 147 EHIRTGDTIATHPGVAQWFYNDGN 170 (466)
T ss_dssp EEEETTEEEEECTTCEEEEECCSS
T ss_pred ccccCCCEEEECCCCcEEEEeCCC
Confidence 589999999999999999999864
No 153
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=71.94 E-value=6.2 Score=39.22 Aligned_cols=64 Identities=9% Similarity=0.068 Sum_probs=43.3
Q ss_pred cceeEEcCCC-CCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 461 GANMYLTPPN-SQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 461 ~aNaYlTPpg-~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
.+|+|---.. ...+++|+-++--+++-..|+-. .+... . .....+.|||+++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i~~~-~------------------------~~~~~l~~g~l~~i 61 (276)
T 3gbg_A 8 QTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LIDKN-C------------------------LVSYEINSSSIILL 61 (276)
T ss_dssp EEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-EEETT-T------------------------TEEEEECTTEEEEE
T ss_pred hhhhhhhhcccchhccHhhhcceEEEEEecCceE-EECCc-c------------------------ceeEEEcCCCEEEE
Confidence 4677765442 34467888555555555677766 55431 0 01568999999999
Q ss_pred CCCCceeeeeC
Q 004048 540 PRGFSHEACTE 550 (776)
Q Consensus 540 PRGwwH~a~A~ 550 (776)
|||..|.....
T Consensus 62 ~p~~~h~~~~~ 72 (276)
T 3gbg_A 62 KKNSIQRFSLT 72 (276)
T ss_dssp CTTCEEEEEEE
T ss_pred cCCCceeeccc
Confidence 99999998765
No 154
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=71.86 E-value=8.8 Score=40.67 Aligned_cols=44 Identities=23% Similarity=0.187 Sum_probs=36.3
Q ss_pred CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCCc
Q 004048 482 CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDDG 553 (776)
Q Consensus 482 DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg 553 (776)
|+++.|++|+=..++.. .+..|.+||+|-||+|.-|.-...++|
T Consensus 227 d~wiWqLEGss~Vt~~~----------------------------q~~~L~~~DsLLIpa~~~y~~~r~~gs 270 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTMGG----------------------------RRLSLAPDDSLLVLAGTSYAWERTQGS 270 (286)
T ss_dssp CEEEEEEESCEEEEETT----------------------------EEEEECTTEEEEECTTCCEEEEECTTC
T ss_pred cEEEEEEcCceEEEECC----------------------------eEEeccCCCEEEecCCCeEEEEecCCe
Confidence 89999999987544322 567999999999999999999997664
No 155
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=71.41 E-value=1.8 Score=45.90 Aligned_cols=23 Identities=35% Similarity=0.860 Sum_probs=20.3
Q ss_pred eEEEEcCCcEeeeCCCCceeeee
Q 004048 527 RQFLLREGDILYIPRGFSHEACT 549 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A 549 (776)
..+.|+|||.+|||.|.+|.--+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 56799999999999999998644
No 156
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=70.85 E-value=17 Score=35.80 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=45.4
Q ss_pred cccceeEEcCCCCCccccccc---CCCeEEEEEeee-EEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC-
Q 004048 459 SVGANMYLTPPNSQGLASHYD---DHCVFVCQLFGT-KQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE- 533 (776)
Q Consensus 459 ~v~aNaYlTPpg~qGf~pHyD---~~DVFVlQL~Gr-KrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP- 533 (776)
.+++|..++-+ +.-=|.||- ...=++.-+.|+ ....+--.. .-|. | | .+..++|.+
T Consensus 48 f~Q~n~S~s~~-GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~--~SpT----f----------g--~~~~~~Ls~~ 108 (184)
T 2ixk_A 48 FVQDNHSRSAR-GVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRR--GSPT----F----------G--QWVGERLSAE 108 (184)
T ss_dssp CCEEEEEEEET-TBEEEEEEESSSCCCEEEEEEESEEEEEEEECBT--TSTT----T----------T--CEEEEEEETT
T ss_pred EEEEEEEeCCC-CceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCC--CCCC----C----------C--eEEEEEeCCC
Confidence 46888777754 322367776 234456667886 333332110 1110 1 1 135567765
Q ss_pred -CcEeeeCCCCceeeeeCCC
Q 004048 534 -GDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 534 -GDVLYIPRGwwH~a~A~de 552 (776)
+-.||||+|+||.-.+.++
T Consensus 109 n~~~L~IP~G~aHgf~~lsd 128 (184)
T 2ixk_A 109 NKRQMWIPAGFAHGFVVLSE 128 (184)
T ss_dssp TCCEEEECTTEEEEEEECSS
T ss_pred cCCEEEeCCCeEEEEEEcCC
Confidence 6899999999999999876
No 157
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=70.53 E-value=9.7 Score=42.72 Aligned_cols=26 Identities=46% Similarity=0.658 Sum_probs=23.1
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
....+++||+++||+|..|+....++
T Consensus 130 k~~~~~~GDvi~iPaG~~hw~~N~G~ 155 (465)
T 3qac_A 130 KIRHLREGDIFAMPAGVSHWAYNNGD 155 (465)
T ss_dssp CEEEEETTEEEEECTTCEEEEECCSS
T ss_pred ceeeecCCCEEEECCCCeEEEEcCCC
Confidence 35699999999999999999999865
No 158
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=70.33 E-value=20 Score=35.39 Aligned_cols=75 Identities=19% Similarity=0.182 Sum_probs=46.3
Q ss_pred cccceeEEcCCCCCcccccccC----CCeEEEEEeee-EEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC
Q 004048 459 SVGANMYLTPPNSQGLASHYDD----HCVFVCQLFGT-KQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE 533 (776)
Q Consensus 459 ~v~aNaYlTPpg~qGf~pHyD~----~DVFVlQL~Gr-KrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP 533 (776)
.+++|..++-+ +.-=|.||-. ..=++.-+.|+ ....+--.. .-|. | | .+..++|.+
T Consensus 46 f~Q~n~S~s~~-GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~--~SpT----f----------g--~~~~~~Ls~ 106 (183)
T 1dzr_A 46 FVQDNHSKSKK-NVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRK--ESPT----F----------G--QWVGVNLSA 106 (183)
T ss_dssp CCEEEEEEEET-TBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCT--TCTT----T----------T--CEEEEEEET
T ss_pred EEEEEEEeCCC-CeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCC--CCCC----C----------C--eEEEEEecC
Confidence 46888777764 3223677763 34456667887 344442211 1111 1 1 135567765
Q ss_pred --CcEeeeCCCCceeeeeCCC
Q 004048 534 --GDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 534 --GDVLYIPRGwwH~a~A~de 552 (776)
+-.||||+|+||.-.+.++
T Consensus 107 ~n~~~L~IP~G~aHgf~~lsd 127 (183)
T 1dzr_A 107 ENKRQLWIPEGFAHGFVTLSE 127 (183)
T ss_dssp TTCCEEEECTTEEEEEEECSS
T ss_pred CCCCEEEeCCCeEEEEEEcCC
Confidence 6899999999999999876
No 159
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=70.31 E-value=5.9 Score=42.03 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=71.0
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcc-hhhHHHHHhhhhhccccchhhh
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNS-EKRVLVAAANAVLDLSTTSVGR 144 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~-~~~v~~~a~n~vld~s~t~~~~ 144 (776)
+.+..|--||.+... .+-..++++++-.+-.. +.-+.+...++++..|+.+|.++ +..|...||.++-.+|...-.+
T Consensus 17 ~~i~~Lv~lL~~~~~-~v~~~A~~~L~~l~~~~-~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~ 94 (529)
T 1jdh_A 17 RAIPELTKLLNDEDQ-VVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGL 94 (529)
T ss_dssp CHHHHHHHHHTCSCH-HHHHHHHHHHHHHHTSH-HHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHH
T ss_pred hhHHHHHHHhCCCCH-HHHHHHHHHHHHHHcCC-ccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhH
Confidence 344455556777666 78888888888776432 22234555678999999999876 7899999999999999999899
Q ss_pred hhhhcchhHHHHHHH
Q 004048 145 QKLLESSALEALLLI 159 (776)
Q Consensus 145 ~~l~~~~~l~~~~~~ 159 (776)
+.+.+..++|.++.+
T Consensus 95 ~~i~~~g~i~~L~~l 109 (529)
T 1jdh_A 95 LAIFKSGGIPALVKM 109 (529)
T ss_dssp HHHHHTTHHHHHHHH
T ss_pred HHHHHcCCHHHHHHH
Confidence 999999899988854
No 160
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=70.03 E-value=6.1 Score=44.22 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=71.6
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcc-hhhHHHHHhhhhhccccchhhh
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNS-EKRVLVAAANAVLDLSTTSVGR 144 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~-~~~v~~~a~n~vld~s~t~~~~ 144 (776)
+.+..|--||.+... .|-..++.+++-.+-.. +.-..+...++++..|+.+|.++ +..|...||.++-.+|...-++
T Consensus 14 g~i~~Lv~lL~~~~~-~vr~~A~~~L~~La~~~-~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~ 91 (644)
T 2z6h_A 14 RAIPELTKLLNDEDQ-VVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGL 91 (644)
T ss_dssp TTHHHHHHHHTCSCH-HHHHHHHHHHHHHHTST-THHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHH
T ss_pred chHHHHHHHHcCCCH-HHHHHHHHHHHHHHCCC-hhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhH
Confidence 344455556677666 78888888888776543 22234555678999999999976 7899999999999999999999
Q ss_pred hhhhcchhHHHHHHH
Q 004048 145 QKLLESSALEALLLI 159 (776)
Q Consensus 145 ~~l~~~~~l~~~~~~ 159 (776)
+.+.+..+++.+..+
T Consensus 92 ~~i~~~g~i~~Lv~l 106 (644)
T 2z6h_A 92 LAIFKSGGIPALVKM 106 (644)
T ss_dssp HHHHTTTHHHHHHHH
T ss_pred HHHHHcCCHHHHHHH
Confidence 999999898888754
No 161
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=69.85 E-value=5.1 Score=43.93 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=44.2
Q ss_pred eeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcE------
Q 004048 463 NMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDI------ 536 (776)
Q Consensus 463 NaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDV------ 536 (776)
.+-+.|. +-..|||-+.+-++.-+.|+=+..+..+.. ..+.+|++||+
T Consensus 56 ~~~l~pg--g~~~ph~~~a~ei~yVl~G~~~v~~v~~~~------------------------~~~~~l~~GDv~~~~~~ 109 (397)
T 2phl_A 56 EFRSKPE--TLLLPQQADAELLLVVRSGSAILVLVKPDD------------------------RREYFFLTSDNPIFSDH 109 (397)
T ss_dssp EEEECSS--EEEEEEEESEEEEEEEEESEEEEEEEETTT------------------------EEEEEEEESSCTTSCSE
T ss_pred EEEECCC--cCccCEecCCCeEEEEEeeeEEEEEEeCCC------------------------cEEEEECCCCcccccce
Confidence 3444443 335788866666666777777777664311 03459999999
Q ss_pred eeeCCCCceeeeeCC
Q 004048 537 LYIPRGFSHEACTED 551 (776)
Q Consensus 537 LYIPRGwwH~a~A~d 551 (776)
+|||+|..|+-...+
T Consensus 110 ~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 110 QKIPAGTIFYLVNPD 124 (397)
T ss_dssp EEECTTCEEEEEECC
T ss_pred EEECCCCcEEEEeCC
Confidence 999999999998876
No 162
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=69.63 E-value=5 Score=43.21 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=67.7
Q ss_pred hHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcc-hhhHHHHHhhhhhccccch-hhh
Q 004048 67 ILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNS-EKRVLVAAANAVLDLSTTS-VGR 144 (776)
Q Consensus 67 ~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~-~~~v~~~a~n~vld~s~t~-~~~ 144 (776)
++..|--+|.+... .|...++.++|-.+-.+ +.+-+...+.+++..|+.+|.+. +..|...||.++-+++..+ -..
T Consensus 287 ~v~~Lv~lL~~~~~-~v~~~a~~~L~nl~~~~-~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~ 364 (528)
T 4b8j_A 287 VCPRLVELLLHPSP-SVLIPALRTVGNIVTGD-DAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQI 364 (528)
T ss_dssp CHHHHHHHTTCSCH-HHHHHHHHHHHHHTTSC-HHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHcCCCh-hHHHHHHHHHHHHHcCC-HHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHH
Confidence 34444455666655 78888888888777543 33444556789999999999999 9999999999999998743 344
Q ss_pred hhhhcchhHHHHHHHH
Q 004048 145 QKLLESSALEALLLIF 160 (776)
Q Consensus 145 ~~l~~~~~l~~~~~~~ 160 (776)
+.+.+..+++.++.+.
T Consensus 365 ~~~~~~~~i~~L~~lL 380 (528)
T 4b8j_A 365 QAVINAGIIGPLVNLL 380 (528)
T ss_dssp HHHHHTTCHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHH
Confidence 5666667777777554
No 163
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=69.37 E-value=5.8 Score=42.88 Aligned_cols=85 Identities=19% Similarity=0.221 Sum_probs=66.9
Q ss_pred HhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccc-hhhhhhhhcchh
Q 004048 74 LLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTT-SVGRQKLLESSA 152 (776)
Q Consensus 74 ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t-~~~~~~l~~~~~ 152 (776)
+|.|... ++-..++..++-.+... +-+.+.-.+.+.+..|+.+|++++..|-..||-++.+++.. .--|..+.+.-+
T Consensus 10 ~L~s~~~-~~q~~A~~~L~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~ 87 (457)
T 1xm9_A 10 YLSSQDE-KYQAIGAYYIQHTCFQD-ESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNG 87 (457)
T ss_dssp HHHSSCT-HHHHHHHHHHHHHTSSC-SSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTC
T ss_pred HHCCCCH-HHHHHHHHHHHHHHcCC-hHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCC
Confidence 4556655 77777788777766433 33343345788999999999999999999999999999985 888899999999
Q ss_pred HHHHHHHH
Q 004048 153 LEALLLIF 160 (776)
Q Consensus 153 l~~~~~~~ 160 (776)
+|.|+.+.
T Consensus 88 i~~Lv~lL 95 (457)
T 1xm9_A 88 IREAVSLL 95 (457)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998554
No 164
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=69.36 E-value=6.8 Score=37.50 Aligned_cols=55 Identities=15% Similarity=0.353 Sum_probs=39.4
Q ss_pred eEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCC
Q 004048 464 MYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGF 543 (776)
Q Consensus 464 aYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGw 543 (776)
+.+.| +..+++|.-.....++-++|+ |++... ..++.|||.+|.|+|.
T Consensus 47 vr~~p--G~~~p~H~H~g~ee~~VL~G~--~~~~e~----------------------------~~~~~~Gd~~~~P~g~ 94 (159)
T 3ebr_A 47 LKAPA--GMEMPRHHHTGTVIVYTVQGS--WRYKEH----------------------------DWVAHAGSVVYETAST 94 (159)
T ss_dssp EEECS--SCBCCCEEESSCEEEEEEESC--EEETTS----------------------------SCCBCTTCEEEECSSE
T ss_pred EEECC--CCCcccccCCCCEEEEEEEeE--EEEeCC----------------------------CeEECCCeEEEECCCC
Confidence 44543 356889988777777777787 443110 0156699999999999
Q ss_pred ceeeeeC
Q 004048 544 SHEACTE 550 (776)
Q Consensus 544 wH~a~A~ 550 (776)
.|...+.
T Consensus 95 ~H~~~~~ 101 (159)
T 3ebr_A 95 RHTPQSA 101 (159)
T ss_dssp EECEEES
T ss_pred cceeEeC
Confidence 9999987
No 165
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=68.31 E-value=5.8 Score=41.24 Aligned_cols=88 Identities=20% Similarity=0.244 Sum_probs=66.5
Q ss_pred HHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcc-hhhHHHHHhhhhhcccc-chhhhhhh
Q 004048 70 LLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNS-EKRVLVAAANAVLDLST-TSVGRQKL 147 (776)
Q Consensus 70 llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~-~~~v~~~a~n~vld~s~-t~~~~~~l 147 (776)
|++-||.|... .|-..+|.++|-++-- -+.+-+...+.+.+.-|+.+|.+. +..|...||-|+=.+.. ..-+.+.+
T Consensus 86 Lv~~lL~s~~~-~vr~~Aa~~Lg~ia~~-n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~ 163 (296)
T 1xqr_A 86 LVGRYLEAGAA-GLRWRAAQLIGTCSQN-VAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQF 163 (296)
T ss_dssp HHHTTTTCSSH-HHHHHHHHHHHHHHTT-CHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCCH-HHHHHHHHHHHHHHhC-CHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 34425677766 8999999999987643 334555667889999999999964 78899999999998875 45567777
Q ss_pred hcchhHHHHHHH
Q 004048 148 LESSALEALLLI 159 (776)
Q Consensus 148 ~~~~~l~~~~~~ 159 (776)
.+..+++-|..+
T Consensus 164 ~~~ggi~~L~~l 175 (296)
T 1xqr_A 164 LRLDGFSVLMRA 175 (296)
T ss_dssp HHTTHHHHHHHH
T ss_pred HHCCCHHHHHHH
Confidence 777788877644
No 166
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=67.89 E-value=2.6 Score=46.14 Aligned_cols=23 Identities=13% Similarity=0.221 Sum_probs=20.3
Q ss_pred eEEEEcCCcEeeeCCCCceeeee
Q 004048 527 RQFLLREGDILYIPRGFSHEACT 549 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A 549 (776)
..+.|+|||.+|||.|.+|.--+
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred eEEECCCCCEEEcCCCCceEcCC
Confidence 56799999999999999998654
No 167
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=67.41 E-value=5.1 Score=38.75 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=42.2
Q ss_pred eeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCC
Q 004048 463 NMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRG 542 (776)
Q Consensus 463 NaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG 542 (776)
-+.+.| +..+++|.-....+++-++|+= ..-. . + +.++.|||.+|+|+|
T Consensus 47 lvr~~p--G~~~p~H~H~g~ee~~VL~G~f--~~~~--~---~----------------------~~~~~aGd~~~~P~g 95 (165)
T 3cjx_A 47 RASFAP--GLTLPLHFHTGTVHMYTISGCW--YYTE--Y---P----------------------GQKQTAGCYLYEPGG 95 (165)
T ss_dssp EEEECT--TCBCCEEEESSCEEEEEEESEE--EETT--C---T----------------------TSCEETTEEEEECTT
T ss_pred EEEECC--CCcCCcccCCCCEEEEEEEEEE--EECC--C---c----------------------eEEECCCeEEEeCCC
Confidence 344543 3568999999999999899963 3211 0 0 116779999999999
Q ss_pred CceeeeeCC
Q 004048 543 FSHEACTED 551 (776)
Q Consensus 543 wwH~a~A~d 551 (776)
..|...+.+
T Consensus 96 ~~H~~~a~~ 104 (165)
T 3cjx_A 96 SIHQFNTPR 104 (165)
T ss_dssp CEECEECCT
T ss_pred CceeeEeCC
Confidence 999999975
No 168
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=67.08 E-value=5.6 Score=36.74 Aligned_cols=63 Identities=11% Similarity=0.072 Sum_probs=43.7
Q ss_pred ccceeEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeee
Q 004048 460 VGANMYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYI 539 (776)
Q Consensus 460 v~aNaYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYI 539 (776)
..+.+|-.+| +.+..+||..|=|..-|+|+=+-+.-. | ..++++|||++++
T Consensus 42 ~~~GvWe~tP--G~~~~~~~~~~E~~~iLeG~~~lt~dd-----------------------G----~~~~l~aGD~~~~ 92 (116)
T 3es4_A 42 TIVAVWMAEP--GIYNYAGRDLEETFVVVEGEALYSQAD-----------------------A----DPVKIGPGSIVSI 92 (116)
T ss_dssp CEEEEEEECS--EEEEECCCSEEEEEEEEECCEEEEETT-----------------------C----CCEEECTTEEEEE
T ss_pred EEEEEEecCC--ceeECeeCCCcEEEEEEEeEEEEEeCC-----------------------C----eEEEECCCCEEEE
Confidence 4566787777 357888888766777788876554211 1 2348999999999
Q ss_pred CCCCceeeeeCC
Q 004048 540 PRGFSHEACTED 551 (776)
Q Consensus 540 PRGwwH~a~A~d 551 (776)
|+|+-..-+..+
T Consensus 93 P~G~~gtWev~e 104 (116)
T 3es4_A 93 AKGVPSRLEILS 104 (116)
T ss_dssp CTTCCEEEEECS
T ss_pred CCCCeEEEEEeE
Confidence 999876655543
No 169
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=66.68 E-value=8.6 Score=41.62 Aligned_cols=84 Identities=24% Similarity=0.158 Sum_probs=58.8
Q ss_pred HHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccc-hhhhhhhhcch
Q 004048 73 VLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTT-SVGRQKLLESS 151 (776)
Q Consensus 73 ~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t-~~~~~~l~~~~ 151 (776)
-+|.+... .|-..++.+++-.+-.+-+. -+...+.+++..|+.+|...+..|...||.++-++++. ....+.+.+..
T Consensus 264 ~lL~~~d~-~v~~~a~~~L~~L~~~~~~~-~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 341 (530)
T 1wa5_B 264 KLIYSMDT-ETLVDACWAISYLSDGPQEA-IQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAG 341 (530)
T ss_dssp HHTTCCCH-HHHHHHHHHHHHHHSSCHHH-HHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT
T ss_pred HHHcCCCH-HHHHHHHHHHHHHhCCCHHH-HHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcc
Confidence 34455444 66667777777665433222 23345678999999999999999999999999999864 34455566666
Q ss_pred hHHHHHH
Q 004048 152 ALEALLL 158 (776)
Q Consensus 152 ~l~~~~~ 158 (776)
+++.++.
T Consensus 342 ~l~~L~~ 348 (530)
T 1wa5_B 342 VLPALRL 348 (530)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 7776663
No 170
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=66.62 E-value=3.8 Score=45.22 Aligned_cols=83 Identities=16% Similarity=0.163 Sum_probs=44.7
Q ss_pred eeEEcCCCCCccccccc-CCCeEEEEEeeeEEEEEecCCCCCCCCCCCC-C-CCC--CCccccccc-ccceEEEEcCCcE
Q 004048 463 NMYLTPPNSQGLASHYD-DHCVFVCQLFGTKQWKIFAQPSVQLPRLYNP-C-DIV--NGVEAESSM-AECRQFLLREGDI 536 (776)
Q Consensus 463 NaYlTPpg~qGf~pHyD-~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~p-f-~p~--~~~~dd~g~-~~~~evvLePGDV 536 (776)
-+-+.|. +-..|||- .-.-++.=+.|+=+..+..+.. +...+. . +.. .....+... -......|++|||
T Consensus 267 r~~l~pg--g~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV 341 (418)
T 3s7i_A 267 CVEIKEG--ALMLPHFNSKAMVIVVVNKGTGNLELVAVRK---EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDV 341 (418)
T ss_dssp EEEECTT--EEEEEEEESSCEEEEEEEECCEEEEEEEEEE---C-------------------CCEEEEEEEEEECTTCE
T ss_pred EEEecCC--ceeCceecCCCCEEEEEEeCeEEEEEEeCCC---ccccccccccccccccccccccccceEEEeeeCCCCE
Confidence 3455554 45799995 3455666666777777764311 000000 0 000 000000000 0124679999999
Q ss_pred eeeCCCCceeeeeC
Q 004048 537 LYIPRGFSHEACTE 550 (776)
Q Consensus 537 LYIPRGwwH~a~A~ 550 (776)
++||+|++|...+.
T Consensus 342 ~vvP~G~~~~~~~~ 355 (418)
T 3s7i_A 342 FIMPAAHPVAINAS 355 (418)
T ss_dssp EEECTTCCEEEEES
T ss_pred EEECCCCEEEEECC
Confidence 99999999998764
No 171
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=66.14 E-value=12 Score=36.60 Aligned_cols=21 Identities=24% Similarity=0.357 Sum_probs=19.7
Q ss_pred EEcCCcEeeeCCCCceeeeeC
Q 004048 530 LLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 530 vLePGDVLYIPRGwwH~a~A~ 550 (776)
++.+||.+++|+|..|...+.
T Consensus 162 ~~~~Gd~~~~p~g~~H~p~a~ 182 (195)
T 2q1z_B 162 RFGAGDIEIADQELEHTPVAE 182 (195)
T ss_dssp EEETTCEEEECSSCCCCCEEC
T ss_pred EECCCeEEEeCcCCccCCEeC
Confidence 788999999999999999995
No 172
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=66.05 E-value=4.5 Score=43.81 Aligned_cols=90 Identities=21% Similarity=0.186 Sum_probs=63.4
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccch----
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTTS---- 141 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t~---- 141 (776)
.++..|..+|.+... .|-..++.++|..+-.+-+.-.. ..+.+++..|+.+|.+++.+|-.+||.++-+++...
T Consensus 341 ~~l~~L~~lL~~~~~-~vr~~A~~aL~~l~~~~~~~~~~-~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~ 418 (530)
T 1wa5_B 341 GVLPALRLLLSSPKE-NIKKEACWTISNITAGNTEQIQA-VIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRP 418 (530)
T ss_dssp THHHHHHHHTTCSCH-HHHHHHHHHHHHHTTSCHHHHHH-HHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCT
T ss_pred chHHHHHHHHcCCCH-HHHHHHHHHHHHHHcCCHHHHHH-HHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcH
Confidence 455556666777655 77788888888766543332222 347889999999999999999999999999997642
Q ss_pred hhhhhhhcchhHHHHH
Q 004048 142 VGRQKLLESSALEALL 157 (776)
Q Consensus 142 ~~~~~l~~~~~l~~~~ 157 (776)
--.+.+.+..+++.++
T Consensus 419 ~~~~~l~~~~~l~~L~ 434 (530)
T 1wa5_B 419 DIIRYLVSQGCIKPLC 434 (530)
T ss_dssp HHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHCCCHHHHH
Confidence 2344555555666655
No 173
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=65.51 E-value=7.2 Score=43.67 Aligned_cols=88 Identities=18% Similarity=0.184 Sum_probs=66.7
Q ss_pred HHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc-chhhhhhhhc
Q 004048 71 LPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST-TSVGRQKLLE 149 (776)
Q Consensus 71 lp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~-t~~~~~~l~~ 149 (776)
|=-+|.+... .+-..++.+++-.+... +.+.....+.+++..|+.+|.+.+.++..+||.++-.++. +.-.|..+.+
T Consensus 103 Lv~lL~~~~~-~v~~~A~~aL~nL~~~~-~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~ 180 (644)
T 2z6h_A 103 LVKMLGSPVD-SVLFYAITTLHNLLLHQ-EGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILA 180 (644)
T ss_dssp HHHHTTCSSH-HHHHHHHHHHHHHHHHS-TTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhCCCH-HHHHHHHHHHHHHHhCc-chhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3344555544 66667777777665543 4455555688999999999999999999999999999985 6778888888
Q ss_pred chhHHHHHHHH
Q 004048 150 SSALEALLLIF 160 (776)
Q Consensus 150 ~~~l~~~~~~~ 160 (776)
.-+++.++.+.
T Consensus 181 ~g~v~~Lv~lL 191 (644)
T 2z6h_A 181 SGGPQALVNIM 191 (644)
T ss_dssp TTHHHHHHHHH
T ss_pred cCChHHHHHHH
Confidence 88888887655
No 174
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=65.24 E-value=14 Score=38.02 Aligned_cols=27 Identities=11% Similarity=0.240 Sum_probs=23.7
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCCc
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDDG 553 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~deg 553 (776)
....|+|||++|+|+|..|...+.++.
T Consensus 230 ~~~~v~~GD~~~~~~~~~h~~~n~g~~ 256 (278)
T 1sq4_A 230 DWVEVEAGDFMWLRAFCPQACYSGGPG 256 (278)
T ss_dssp EEEEEETTCEEEEEESCCEEEECCSSS
T ss_pred EEEEeCCCCEEEECCCCCEEEEcCCCC
Confidence 567999999999999999999987653
No 175
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=64.01 E-value=9.1 Score=43.90 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=65.2
Q ss_pred HhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc--chhhhhhhhcch
Q 004048 74 LLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST--TSVGRQKLLESS 151 (776)
Q Consensus 74 ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~--t~~~~~~l~~~~ 151 (776)
+|.|... .+-..+|..+.-.+...-+ |-..-.+.+.+..|+.+|.+++..|-+.||.|+.+|+. ..-.|..+.+.-
T Consensus 56 ~L~s~~~-~~q~~Aa~~L~~La~~~~~-~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~G 133 (584)
T 3l6x_A 56 MLGFRLD-AVKSNAAAYLQHLCYRNDK-VKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCD 133 (584)
T ss_dssp HTTCSCH-HHHHHHHHHHHHHHTTCHH-HHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTT
T ss_pred HHCCCCH-HHHHHHHHHHHHHHcCChH-HHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcC
Confidence 4455444 5555666665544443333 33444477778999999999999999999999999998 388999999999
Q ss_pred hHHHHHHHHH
Q 004048 152 ALEALLLIFL 161 (776)
Q Consensus 152 ~l~~~~~~~~ 161 (776)
++|.|+.+..
T Consensus 134 aIp~LV~LL~ 143 (584)
T 3l6x_A 134 GVPALVRLLR 143 (584)
T ss_dssp HHHHHHHHHH
T ss_pred CHHHHHHHHc
Confidence 9999996655
No 176
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=63.49 E-value=35 Score=34.90 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=46.7
Q ss_pred cccceeEEcCCCCCcccccccC----CCeEEEEEeee-EEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC
Q 004048 459 SVGANMYLTPPNSQGLASHYDD----HCVFVCQLFGT-KQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE 533 (776)
Q Consensus 459 ~v~aNaYlTPpg~qGf~pHyD~----~DVFVlQL~Gr-KrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP 533 (776)
.+++|..++.+ +.-=|.||-. ..=++.-+.|+ ....|-- |..+|. .| .+..++|.+
T Consensus 65 f~Q~n~S~s~~-GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDl-------R~~SpT---------fG--~~~~v~Ls~ 125 (225)
T 1upi_A 65 VRQVNCSVSSA-GVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDI-------REGSPT---------FG--RWDSVLLDD 125 (225)
T ss_dssp CCEEEEEEECT-TBEEEEEEECTTTCCCEEEEEEESEEEEEEECC-------CBTCTT---------TT--CEEEEEEET
T ss_pred eEEEEEEeCCC-CeEeeeeccCCCCCcceEEEEeCCeEEEEEEEC-------CCCCCC---------CC--cEEEEEecC
Confidence 46888888865 3223778775 34566677886 3333321 111110 11 135667766
Q ss_pred --CcEeeeCCCCceeeeeCCC
Q 004048 534 --GDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 534 --GDVLYIPRGwwH~a~A~de 552 (776)
+-.||||+|+||.-.+.++
T Consensus 126 ~n~~~L~IP~G~aHgF~~Lsd 146 (225)
T 1upi_A 126 QDRRTIYVSEGLAHGFLALQD 146 (225)
T ss_dssp TTCCEEEECTTCEEEEEECSS
T ss_pred CCCcEEEeCCCeeEEEEEcCC
Confidence 5899999999999999876
No 177
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=63.30 E-value=16 Score=41.48 Aligned_cols=24 Identities=25% Similarity=0.540 Sum_probs=22.3
Q ss_pred EEEcCCcEeeeCCCCceeeeeCCC
Q 004048 529 FLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 529 vvLePGDVLYIPRGwwH~a~A~de 552 (776)
..|++||++|||+|..|+....++
T Consensus 128 ~~v~~GDvi~iPaG~~hw~~N~g~ 151 (510)
T 3c3v_A 128 HRFNEGDLIAVPTGVAFWLYNDHD 151 (510)
T ss_dssp EEECTTEEEEECTTCEEEEEECSS
T ss_pred EEecCCCEEEECCCCCEEEEeCCC
Confidence 689999999999999999999865
No 178
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=63.21 E-value=24 Score=39.84 Aligned_cols=78 Identities=17% Similarity=0.214 Sum_probs=42.3
Q ss_pred CcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCC-CCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 472 QGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYN-PCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 472 qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~-pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
+-+.|||-...-+++-+.|+=..-+-.|.. |..|+ ++..-...............+|++|||+.||+|.+|+....
T Consensus 57 gl~lPh~~~A~ei~~V~qG~g~~G~v~p~~---~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~ 133 (496)
T 3ksc_A 57 ALRRPYYSNAPQEIFIQQGNGYFGMVFPGC---PETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYND 133 (496)
T ss_dssp EEEEEEEESSCEEEEEEECCEEEEEECTTC---CCC---------------CCCCCCEEEECTTEEEEECTTCEEEEEEC
T ss_pred CEeCceEcCCCEEEEEEeCceEEEEEeCCC---CccchhhhhcccccccccccchheeeccCCCCEEEECCCCcEEEEcC
Confidence 346788888776666666666666654311 11121 00000000000000011234999999999999999999997
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 134 G~ 135 (496)
T 3ksc_A 134 QD 135 (496)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 179
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=63.20 E-value=16 Score=36.90 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=56.3
Q ss_pred hhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc-chhhhhhhhcchhHHHHHHHHH
Q 004048 86 LSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST-TSVGRQKLLESSALEALLLIFL 161 (776)
Q Consensus 86 ~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~-t~~~~~~l~~~~~l~~~~~~~~ 161 (776)
.++..+...+...-+.-..| .+.+.+..|+.+|.+++..|-+.||-|+.++|. +.-.|..+.+.-++|.|+.+..
T Consensus 29 ~Aa~~l~~L~~~~~~~r~~I-~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~ 104 (233)
T 3tt9_A 29 AAATFIQHECFQKSEARKRV-NQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLK 104 (233)
T ss_dssp HHHHHHHHHHHHCHHHHHHH-HHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHH-HHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHc
Confidence 34444433333333333344 455667999999999999999999999999998 6788999999999999997654
No 180
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=62.73 E-value=3.4 Score=45.89 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=20.5
Q ss_pred eEEEEcCCcEeeeCCCCceeeee
Q 004048 527 RQFLLREGDILYIPRGFSHEACT 549 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A 549 (776)
..+.|+|||.+|||+|.+|.-.+
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCC
Confidence 46799999999999999998765
No 181
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=60.91 E-value=33 Score=34.81 Aligned_cols=75 Identities=17% Similarity=0.229 Sum_probs=46.6
Q ss_pred cccceeEEcCCCCCcccccccC----CCeEEEEEeee-EEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC
Q 004048 459 SVGANMYLTPPNSQGLASHYDD----HCVFVCQLFGT-KQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE 533 (776)
Q Consensus 459 ~v~aNaYlTPpg~qGf~pHyD~----~DVFVlQL~Gr-KrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP 533 (776)
.+++|..++.+ +.-=|.||-. ..=++.-+.|+ ....|--... -|. | | .+..++|.+
T Consensus 54 f~Q~n~S~s~~-GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~--SpT----f----------G--~~~~v~Ls~ 114 (216)
T 2c0z_A 54 LAQANLSVSVR-GVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVG--SPT----Y----------G--CWEGTRLDD 114 (216)
T ss_dssp CCEEEEEEEET-TBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBT--CTT----T----------T--CEEEEEEET
T ss_pred EEEEEEEeCCC-CcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCC--CCC----C----------C--eEEEEEecC
Confidence 46888888754 3223677775 35566677886 3333322100 010 1 1 135667776
Q ss_pred --CcEeeeCCCCceeeeeCCC
Q 004048 534 --GDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 534 --GDVLYIPRGwwH~a~A~de 552 (776)
+-.||||+|+||.-.+.++
T Consensus 115 ~n~~~L~IP~G~aHgF~~Lsd 135 (216)
T 2c0z_A 115 VSRRAVYLSEGIGHGFCAISD 135 (216)
T ss_dssp TTCCEEEECTTEEEEEEECSS
T ss_pred CCCCEEEeCCCeeEEEEEcCC
Confidence 4799999999999999876
No 182
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=60.53 E-value=26 Score=35.19 Aligned_cols=75 Identities=17% Similarity=0.215 Sum_probs=46.1
Q ss_pred cccceeEEcCCCCCcccccccC----CCeEEEEEeee-EEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcC
Q 004048 459 SVGANMYLTPPNSQGLASHYDD----HCVFVCQLFGT-KQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLRE 533 (776)
Q Consensus 459 ~v~aNaYlTPpg~qGf~pHyD~----~DVFVlQL~Gr-KrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLeP 533 (776)
.+++|..++.+ +.-=|.||-. ..=++.-+.|+ ....|-- |..+|. .| .+..++|.+
T Consensus 46 f~Q~n~S~s~~-GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDl-------R~~SpT---------fG--~~~~v~Ls~ 106 (205)
T 1oi6_A 46 VAQTIHSMSKR-GVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDI-------RVGSPT---------FG--QWDSVLMDQ 106 (205)
T ss_dssp CCEEEEEEECT-TBEEEEEEECTTTCCCEEEEEEESCEEEEEECC-------CBTCTT---------TT--CEEEEEECS
T ss_pred EEEEEEEeCCC-CeEeeeeccCCCCCCceEEEEeCCEEEEEEEEC-------CCCCCC---------CC--eEEEEEecC
Confidence 36888888865 3223677774 34556667786 3333221 111110 12 135667776
Q ss_pred --CcEeeeCCCCceeeeeCCC
Q 004048 534 --GDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 534 --GDVLYIPRGwwH~a~A~de 552 (776)
+-.||||+|+||.-.+.++
T Consensus 107 ~n~~~L~IP~G~aHgf~~lsd 127 (205)
T 1oi6_A 107 QDPRAVYLPVGVGHAFVALED 127 (205)
T ss_dssp SSCCEEEECTTCEEEEEECST
T ss_pred CCCCEEEeCCCeeEEEEEccC
Confidence 5899999999999999876
No 183
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=58.35 E-value=23 Score=36.81 Aligned_cols=26 Identities=8% Similarity=0.205 Sum_probs=23.0
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
....+++||++|+|++..|...+.++
T Consensus 225 ~~~~V~~GD~i~~~~~~~h~~~n~G~ 250 (266)
T 4e2q_A 225 NWYPVQAGDVIWMAPFVPQWYAALGK 250 (266)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEEecCCCEEEECCCCcEEEEeCCC
Confidence 45689999999999999999999865
No 184
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=57.90 E-value=16 Score=38.03 Aligned_cols=58 Identities=14% Similarity=0.082 Sum_probs=40.9
Q ss_pred eEEcCCCCCcccccccCCCeEEEEEeeeEEEEEe-cCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCC
Q 004048 464 MYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIF-AQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRG 542 (776)
Q Consensus 464 aYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~-~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRG 542 (776)
+-+.|. + +.+.|....+-|+.-++|+=.-++. . .+.+|++||.+|+|+|
T Consensus 75 v~l~PG-g-~s~~~~h~~EEfiyVleG~l~l~l~~g----------------------------~~~~L~~Gds~y~p~~ 124 (266)
T 4e2q_A 75 AKMKEM-S-SSGLPPQDIERLIFVVEGAVTLTNTSS----------------------------SSKKLTVDSYAYLPPN 124 (266)
T ss_dssp EEECSS-E-ECCCCCTTEEEEEEEEEECEEEEC--C----------------------------CCEEECTTEEEEECTT
T ss_pred EEECcC-C-cCCCCCCCCeEEEEEEEEEEEEEECCC----------------------------cEEEEcCCCEEEECCC
Confidence 444454 3 3356655567788888888665553 2 2348999999999999
Q ss_pred CceeeeeCC
Q 004048 543 FSHEACTED 551 (776)
Q Consensus 543 wwH~a~A~d 551 (776)
..|..+..+
T Consensus 125 ~~H~~~N~~ 133 (266)
T 4e2q_A 125 FHHSLDCVE 133 (266)
T ss_dssp CCCEEEESS
T ss_pred CCEEEEeCC
Confidence 999999853
No 185
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=57.77 E-value=7.1 Score=39.11 Aligned_cols=76 Identities=20% Similarity=0.202 Sum_probs=45.3
Q ss_pred cccceeEEcCCCCCcccccccCC----CeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEc--
Q 004048 459 SVGANMYLTPPNSQGLASHYDDH----CVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLR-- 532 (776)
Q Consensus 459 ~v~aNaYlTPpg~qGf~pHyD~~----DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLe-- 532 (776)
.+++|..++.+ +.-=|.||-.. .=++.-+.|+=.=.+..- |..+|. .| .+..++|.
T Consensus 64 f~Q~n~S~s~~-GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDl------R~~SpT---------fG--~~~~v~Ls~e 125 (196)
T 1wlt_A 64 VIQTNMSFSRK-GVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDV------RKSSPT---------FG--KYVKAELNEE 125 (196)
T ss_dssp EEEEEEEEECT-TBEEEEEEECTTSCCEEEEEEEESEEEEEEEEC------BTTSTT---------TT--CEEEEEEETT
T ss_pred EEEEEEEECCC-CcceeEEccCCCCCCceEEEEeCCEEEEEEEEC------CCCCCC---------CC--eEEEEEecCC
Confidence 45788778754 32236777752 335556777543222221 111110 11 13556776
Q ss_pred CCcEeeeCCCCceeeeeCCC
Q 004048 533 EGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 533 PGDVLYIPRGwwH~a~A~de 552 (776)
++-.||||+|+||.-.+.++
T Consensus 126 n~~~L~IP~G~aHgf~~lsd 145 (196)
T 1wlt_A 126 NHYMLWIPPGFAHGFQALED 145 (196)
T ss_dssp TCCEEEECTTEEEEEEESSS
T ss_pred CCCEEEeCCCeEEEEEEcCC
Confidence 47999999999999999876
No 186
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=57.18 E-value=13 Score=39.29 Aligned_cols=134 Identities=16% Similarity=0.140 Sum_probs=79.8
Q ss_pred hHHHHHHHHHhccCCCchHHHHHHHHhhhhccccCCCCCCC-chhhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhh
Q 004048 23 SIFAILVAALSNSNNNYSEFIIKKCLNRLRLSLLSQSQPTL-PIPILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLET 101 (776)
Q Consensus 23 ~~f~~l~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~-~~~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~ 101 (776)
.+++.|+..+.+++++....-.=++|..+-.... ....+ -.+.+..|--+|.+... .+-..++.+++-.+..+ +.
T Consensus 59 ~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~--~~~~i~~~g~i~~L~~lL~~~~~-~v~~~a~~~L~~l~~~~-~~ 134 (529)
T 1jdh_A 59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE--GLLAIFKSGGIPALVKMLGSPVD-SVLFYAITTLHNLLLHQ-EG 134 (529)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHH--HHHHHHHTTHHHHHHHHTTCSCH-HHHHHHHHHHHHHHHHC-TT
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCch--hHHHHHHcCCHHHHHHHHcCCCH-HHHHHHHHHHHHHhcCC-cc
Confidence 4677888888665433332222223333211000 00000 01223333334555544 66666777776655433 23
Q ss_pred hhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccc-hhhhhhhhcchhHHHHHHHH
Q 004048 102 NEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTT-SVGRQKLLESSALEALLLIF 160 (776)
Q Consensus 102 ~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t-~~~~~~l~~~~~l~~~~~~~ 160 (776)
+-+.-.+.+.+..|+.+|++.+.+|...|+.++-.++.. .-.+..+.+..+++.++.+.
T Consensus 135 ~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll 194 (529)
T 1jdh_A 135 AKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIM 194 (529)
T ss_dssp HHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred hHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHH
Confidence 344445789999999999999999999999999888863 66777777777888887544
No 187
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=56.18 E-value=17 Score=36.67 Aligned_cols=56 Identities=16% Similarity=0.140 Sum_probs=40.0
Q ss_pred eEEcCCCCCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCC
Q 004048 464 MYLTPPNSQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGF 543 (776)
Q Consensus 464 aYlTPpg~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGw 543 (776)
+.+.|. ..+++|.-...-.++-++|+ +. . ...++.|||.+++|+|.
T Consensus 48 vr~~pG--~~~p~H~H~g~Ee~~VL~G~--f~--d----------------------------~~~~~~~Gd~~~~P~g~ 93 (223)
T 3o14_A 48 VRYAPG--SRFSAHTHDGGEEFIVLDGV--FQ--D----------------------------EHGDYPAGTYVRNPPTT 93 (223)
T ss_dssp EEECTT--EECCCEECTTCEEEEEEEEE--EE--E----------------------------TTEEEETTEEEEECTTC
T ss_pred EEECCC--CCcccccCCCCEEEEEEEeE--EE--E----------------------------CCeEECCCeEEEeCCCC
Confidence 455543 56888987777666668887 21 1 01178899999999999
Q ss_pred ceeeeeCCCc
Q 004048 544 SHEACTEDDG 553 (776)
Q Consensus 544 wH~a~A~deg 553 (776)
.|...+.++|
T Consensus 94 ~H~p~a~~gc 103 (223)
T 3o14_A 94 SHVPGSAEGC 103 (223)
T ss_dssp EECCEESSCE
T ss_pred ccccEeCCCC
Confidence 9999995544
No 188
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=55.35 E-value=11 Score=40.77 Aligned_cols=87 Identities=24% Similarity=0.225 Sum_probs=65.3
Q ss_pred HHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhh-cchhhHHHHHhhhhhccccchhhhhhhhc
Q 004048 71 LPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLR-NSEKRVLVAAANAVLDLSTTSVGRQKLLE 149 (776)
Q Consensus 71 lp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~-~~~~~v~~~a~n~vld~s~t~~~~~~l~~ 149 (776)
|=-+|.|... .+-..++-.++-.|..+ +.|-..-.+.+.+..|+.+|+ +++..|.+.|+.++-++|...-.|..+.+
T Consensus 49 Lv~lL~s~~~-~~~~~A~~aL~nLa~~~-~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~ 126 (457)
T 1xm9_A 49 LVDLLRSPNQ-NVQQAAAGALRNLVFRS-TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA 126 (457)
T ss_dssp HHHHTTSSCH-HHHHHHHHHHHHHHSSC-HHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH
T ss_pred HHHHHcCCCH-HHHHHHHHHHHHHhcCC-HHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHh
Confidence 3345555444 45445555554444321 456666678999999999999 88999999999999999999888988998
Q ss_pred chhHHHHHHHH
Q 004048 150 SSALEALLLIF 160 (776)
Q Consensus 150 ~~~l~~~~~~~ 160 (776)
-++|.|+.+.
T Consensus 127 -g~i~~Lv~ll 136 (457)
T 1xm9_A 127 -DALPVLADRV 136 (457)
T ss_dssp -HHHHHHHHHT
T ss_pred -ccHHHHHHHH
Confidence 9999988654
No 189
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=53.82 E-value=7.7 Score=35.30 Aligned_cols=31 Identities=32% Similarity=0.449 Sum_probs=24.7
Q ss_pred EEcCCcEeeeCCC-CceeeeeCCCccCCCccceeEEEe
Q 004048 530 LLREGDILYIPRG-FSHEACTEDDGRTGLAEFSLHLTL 566 (776)
Q Consensus 530 vLePGDVLYIPRG-wwH~a~A~deg~~~~~~~SLHLT~ 566 (776)
..+|||+|++||+ +.|++.-.+++ .=+|++-
T Consensus 7 ep~pGDlI~~~r~~Y~H~gIYvGdg------~ViH~~~ 38 (125)
T 2lkt_A 7 EPKPGDLIEIFRLGYEHWALYIGDG------YVIHLAP 38 (125)
T ss_dssp CCCTTCEEEEECSSSCEEEEEEETT------EEEEEEC
T ss_pred CCCCCCEEEEeCCCccEEEEEeCCC------eEEEEcc
Confidence 4569999999976 68999988775 5688763
No 190
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=51.47 E-value=19 Score=42.83 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=67.0
Q ss_pred HHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc-chhhhhhhhc
Q 004048 71 LPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST-TSVGRQKLLE 149 (776)
Q Consensus 71 lp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~-t~~~~~~l~~ 149 (776)
|--||.|... .|-..+++++|-.+. +-|.-.++..+.+.+..|+.+|++.+..|-.+||-|+=++++ +.-.++.+.+
T Consensus 628 Lv~LL~s~~~-~Vq~~A~~~L~NLa~-~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~ 705 (810)
T 3now_A 628 IEYYLMEDHL-YLTRAAAQCLCNLVM-SEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILA 705 (810)
T ss_dssp HHHHHHSCCT-THHHHHHHHHHHHTT-SHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHT
T ss_pred HHHHHcCCCH-HHHHHHHHHHHHHhC-ChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 3345566666 888889999997765 334445666347899999999999999999999999999999 6666777777
Q ss_pred -chhHHHHHHH
Q 004048 150 -SSALEALLLI 159 (776)
Q Consensus 150 -~~~l~~~~~~ 159 (776)
..+++.|..+
T Consensus 706 ~~g~I~~Lv~L 716 (810)
T 3now_A 706 IASWLDILHTL 716 (810)
T ss_dssp STTHHHHHHHH
T ss_pred HcCCHHHHHHH
Confidence 6677766633
No 191
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=50.78 E-value=56 Score=37.55 Aligned_cols=135 Identities=19% Similarity=0.202 Sum_probs=82.3
Q ss_pred HHHHHhh---cCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccchhhhhh
Q 004048 70 LLPVLLN---SKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTTSVGRQK 146 (776)
Q Consensus 70 llp~ll~---s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t~~~~~~ 146 (776)
++|.|+. +... .|...+|..+|-.+-.. .....-..-.+++..|+..|...+.+|-.+||.++-.+... .| ..
T Consensus 401 ~l~~l~~~l~d~~~-~Vr~~a~~~l~~l~~~~-~~~~~~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~~-~~-~~ 476 (852)
T 4fdd_A 401 LIPHLIQCLSDKKA-LVRSITCWTLSRYAHWV-VSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEE-AC-TE 476 (852)
T ss_dssp HHHHHHHHTTCSSH-HHHHHHHHHHHHTHHHH-HHSCTTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-HG-GG
T ss_pred HHHHHHHHcCCCCH-HHHHHHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH-hh-Hh
Confidence 4555544 3444 57777788887644211 00111223468999999999999999999999999888642 22 22
Q ss_pred hhcchhHHHHHHHHHHH-hccccccccccCCCCCccccccccccchhhHHHHHHHhHhhhccchhhhhcchHHHHHHHHH
Q 004048 147 LLESSALEALLLIFLQV-HRSSTLVSLCAGENGNEASLCIACEEDEFLVLLLDAAIVLINSCDIEQLLRIPRKLYESLFV 225 (776)
Q Consensus 147 l~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~n~~~v~~l~~~~~~~~~~~~~ 225 (776)
+ .+-++.++..+.+. ... ..+-...+++++-.++.++.-. +. ..+.++.+++
T Consensus 477 l--~~~l~~ll~~L~~~l~~~----------------------~~~~~~~~~~ai~~l~~~~~~~-~~--~~~~~~~l~p 529 (852)
T 4fdd_A 477 L--VPYLAYILDTLVFAFSKY----------------------QHKNLLILYDAIGTLADSVGHH-LN--KPEYIQMLMP 529 (852)
T ss_dssp G--GGGHHHHHHHHHHHHHHC----------------------CHHHHHHHHHHHHHHHHHHGGG-GC--CHHHHHHHHH
T ss_pred h--HhHHHHHHHHHHHHHHHh----------------------ChHHHHHHHHHHHHHHHHhhhh-hc--cHHHHHHHHH
Confidence 3 33466666433332 110 1233445677776666655421 21 2568889999
Q ss_pred HHHHHHHHHH
Q 004048 226 FLKELWIKVR 235 (776)
Q Consensus 226 ~l~~~w~~~~ 235 (776)
.|.+.|+.+.
T Consensus 530 ~l~~~~~~l~ 539 (852)
T 4fdd_A 530 PLIQKWNMLK 539 (852)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHhcc
Confidence 9999998765
No 192
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=48.44 E-value=36 Score=37.34 Aligned_cols=117 Identities=18% Similarity=0.180 Sum_probs=63.3
Q ss_pred cceeEEcCCCCCcccccccCCCeEEE--EEee-eEEEEEecCCCC---------CCCCCCC---CCCC-CCC--cccc--
Q 004048 461 GANMYLTPPNSQGLASHYDDHCVFVC--QLFG-TKQWKIFAQPSV---------QLPRLYN---PCDI-VNG--VEAE-- 520 (776)
Q Consensus 461 ~aNaYlTPpg~qGf~pHyD~~DVFVl--QL~G-rKrWrL~~pp~~---------~lPr~~~---pf~p-~~~--~~dd-- 520 (776)
...+|+.-.+ ..|+.|.++++..-+ ...| .|.|-.-|+... ..|.... .|.. ... .+..
T Consensus 220 tP~LYvGm~~-Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~lisP~~L~ 298 (373)
T 3opt_A 220 DSYLYAGLWK-ASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLASPKLLQ 298 (373)
T ss_dssp CCEEEEECTT-CEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHHHSSCSSCTTTSCEEECHHHHH
T ss_pred hhheeecccc-CCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhChhhhhhCHHHhhCCcccCCHHHHH
Confidence 5568998874 578999999987544 4445 599998875321 1221110 0100 000 0011
Q ss_pred cccccceEEEEcCCcEeeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHHHHHHHHHHhhh
Q 004048 521 SSMAECRQFLLREGDILYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEGFAHVALCCWNQ 589 (776)
Q Consensus 521 ~g~~~~~evvLePGDVLYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~l~~~Al~~~~~ 589 (776)
...-++..++=+|||.++.=||..|.+.+.+-+ +.-+++| ++..|..+...|..+-+.
T Consensus 299 ~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn----------~aEAvNF-A~~~Wl~~g~~a~~C~C~ 356 (373)
T 3opt_A 299 ENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYN----------LAESVNF-ALEEWLPIGKKAGKCHCI 356 (373)
T ss_dssp TTTCCCEEEEECTTCEEEECTTCCEEEEESSSE----------EEEEEEE-CCC---------------
T ss_pred hcCCceEEEEECCCCEEEECCCceEEEEecCcc----------HHHHHcc-CcHHHHHhhccCccCccc
Confidence 112356889999999999999999999997642 3556665 466888877777665554
No 193
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=46.81 E-value=23 Score=40.57 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=68.0
Q ss_pred HHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhc-chhhHHHHHhhhhhccccchhhhhhhh
Q 004048 70 LLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRN-SEKRVLVAAANAVLDLSTTSVGRQKLL 148 (776)
Q Consensus 70 llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~-~~~~v~~~a~n~vld~s~t~~~~~~l~ 148 (776)
.|=-||.|... .+-..++-+++-.|...=+.|-..-.+.+.+..|+.+|++ .+..|.+.|+.++..||...--+..+.
T Consensus 94 ~LV~LL~s~~~-~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~ 172 (584)
T 3l6x_A 94 VLVGLLDHPKK-EVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIV 172 (584)
T ss_dssp HHHHGGGCSSH-HHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred HHHHHHCCCCH-HHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHH
Confidence 33345666655 7777777777766653115577777788999999999998 577899999999999999988888888
Q ss_pred cchhHHHHHHHH
Q 004048 149 ESSALEALLLIF 160 (776)
Q Consensus 149 ~~~~l~~~~~~~ 160 (776)
+ .++|.|+.+.
T Consensus 173 ~-~alp~Lv~LL 183 (584)
T 3l6x_A 173 D-HALHALTDEV 183 (584)
T ss_dssp H-HTHHHHHHHT
T ss_pred h-ccHHHHHHHH
Confidence 5 5788888543
No 194
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=45.52 E-value=9.1 Score=37.66 Aligned_cols=39 Identities=28% Similarity=0.612 Sum_probs=27.6
Q ss_pred EcCCcE--eeeCCCCceeeeeCCCccCCCccceeEEEeeccccCcchHHH
Q 004048 531 LREGDI--LYIPRGFSHEACTEDDGRTGLAEFSLHLTLGVEVERPFEWEG 578 (776)
Q Consensus 531 LePGDV--LYIPRGwwH~a~A~deg~~~~~~~SLHLT~SI~~raP~~We~ 578 (776)
+..|+. ++||+|+|+.++..+.+ .+ -+|-.+-|+|++++
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~~g~------~~---LV~C~VaPGF~f~d 141 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMNQDG------FS---LVGCMVSPGFTFDD 141 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEESSSS------EE---EEEEEESSCCCGGG
T ss_pred cccCceeEEEECCCCEEEEEECCCC------cE---EEEEEECCCccCCc
Confidence 456888 99999999999987321 33 34555567777765
No 195
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=45.19 E-value=21 Score=41.48 Aligned_cols=91 Identities=20% Similarity=0.267 Sum_probs=66.7
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhh-hhhhHHHHHHHHHhhhcc-hhhHHHHHhhhhhccccchhh
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQ-IAADAEVVRGLVSLLRNS-EKRVLVAAANAVLDLSTTSVG 143 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~-~a~d~~~~~~l~~~l~~~-~~~v~~~a~n~vld~s~t~~~ 143 (776)
+.+..|=-||.+... .|-..++.+++-.+.. +.|.. +....+++..|+.+|.++ +..|-..||.++-++|...-.
T Consensus 150 g~ip~Lv~lL~~~d~-~vr~~A~~~L~~L~~~--~~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~ 226 (780)
T 2z6g_A 150 RAIPELTKLLNDEDQ-VVVNKAAVMVHQLSKK--EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREG 226 (780)
T ss_dssp HHHHHHHHHHHCSCH-HHHHHHHHHHHHHHTS--HHHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHH
T ss_pred CCHHHHHHHHCCCCH-HHHHHHHHHHHHHhCC--ChhHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchh
Confidence 334334445566555 6777788888765543 33433 443568999999999876 788999999999999998888
Q ss_pred hhhhhcchhHHHHHHH
Q 004048 144 RQKLLESSALEALLLI 159 (776)
Q Consensus 144 ~~~l~~~~~l~~~~~~ 159 (776)
++.+.+..+++.++.+
T Consensus 227 ~~~i~~~g~I~~Lv~l 242 (780)
T 2z6g_A 227 LLAIFKSGGIPALVNM 242 (780)
T ss_dssp HHHHHHTTHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 8888888888887744
No 196
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=44.68 E-value=19 Score=42.83 Aligned_cols=91 Identities=21% Similarity=0.196 Sum_probs=64.9
Q ss_pred hhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccch-hhh
Q 004048 66 PILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTTS-VGR 144 (776)
Q Consensus 66 ~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t~-~~~ 144 (776)
..+.+|..||.+... ++-..+|-+++..+-.+-+.-..+..+++.+.-|+.+|.+++-+|-..||-+|.++++.+ --+
T Consensus 665 g~l~~Lv~LL~s~d~-~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e~~ 743 (810)
T 3now_A 665 DRVKFLALLCEDEDE-ETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGEEIA 743 (810)
T ss_dssp SHHHHHHHGGGCSSH-HHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHhcCCCH-HHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 456667677777655 666666666655554434444555555899999999999999999999999999997643 234
Q ss_pred hhhhcchhHHHHH
Q 004048 145 QKLLESSALEALL 157 (776)
Q Consensus 145 ~~l~~~~~l~~~~ 157 (776)
+.+.+.-+++.|.
T Consensus 744 ~~l~e~G~i~~L~ 756 (810)
T 3now_A 744 KKLFETDIMELLS 756 (810)
T ss_dssp HHHHTSTHHHHHT
T ss_pred HHHHHCCCHHHHH
Confidence 5566666666665
No 197
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=43.88 E-value=82 Score=38.27 Aligned_cols=122 Identities=11% Similarity=0.149 Sum_probs=80.8
Q ss_pred cchhHHHhhhhhhhhhhhhhhhhhhHH----HHHHHHHhhhcchhhHHHHHhhhhhccccchhhhhhhhc------chhH
Q 004048 84 AGLSAEIVGAASLLSLETNEQIAADAE----VVRGLVSLLRNSEKRVLVAAANAVLDLSTTSVGRQKLLE------SSAL 153 (776)
Q Consensus 84 a~~s~e~~g~a~l~s~e~~e~~a~d~~----~~~~l~~~l~~~~~~v~~~a~n~vld~s~t~~~~~~l~~------~~~l 153 (776)
|.-.|.++|--+ |-++...+ ++..|...+...+.+|..+||.|+..+... .++.|.+ .|-+
T Consensus 517 ~~t~~~~lGry~-------~wl~~~~~~L~~vl~~L~~~l~~~~~~v~~~A~~al~~l~~~--c~~~l~~~~~~e~~p~~ 587 (1023)
T 4hat_C 517 ASDIMYVVGQYP-------RFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQK--CKYHFVIQQPRESEPFI 587 (1023)
T ss_dssp HHHHHHHHHTCH-------HHHHHCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHH--HTHHHHSCCTTCSSCHH
T ss_pred HHHHHHHHHHHH-------HHHhccHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH--HHHHhhccCCCCCchhH
Confidence 334557777543 33344444 555566666667789999999999999864 3444533 4556
Q ss_pred HHHHHHHHHHhccccccccccCCCCCccccccccccchhhHHHHHHHhHhhhccchhhhhcchHHHHHHHHHHHHHHHHH
Q 004048 154 EALLLIFLQVHRSSTLVSLCAGENGNEASLCIACEEDEFLVLLLDAAIVLINSCDIEQLLRIPRKLYESLFVFLKELWIK 233 (776)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~n~~~v~~l~~~~~~~~~~~~~~l~~~w~~ 233 (776)
+.++..+.++-.. -+++...-+.+++-.+|.+..-++.. .++.+.+++.+..-|++
T Consensus 588 ~~il~~l~~~~~~---------------------l~~~~~~~lyeai~~vi~~~~~~~~~---~~~l~~L~~~~~~~~~~ 643 (1023)
T 4hat_C 588 QTIIRDIQKTTAD---------------------LQPQQVHTFYKACGIIISEERSVAER---NRLLSDLMQLPNMAWDT 643 (1023)
T ss_dssp HHHHHTHHHHHTT---------------------SCHHHHHHHHHHHHHHHTTCCSHHHH---HHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHh---------------------CCHHHHHHHHHHHHHHHHhCCCHhhH---HHHHHHHHHhHHHHHHH
Confidence 7766555554210 12345567788888999887744433 67889999999999999
Q ss_pred HHHhh
Q 004048 234 VRDQL 238 (776)
Q Consensus 234 ~~~~~ 238 (776)
+-...
T Consensus 644 l~~~~ 648 (1023)
T 4hat_C 644 IVEQS 648 (1023)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88643
No 198
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=43.83 E-value=21 Score=34.38 Aligned_cols=56 Identities=11% Similarity=-0.110 Sum_probs=41.5
Q ss_pred CCcccccccCCCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 471 SQGLASHYDDHCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 471 ~qGf~pHyD~~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
+.-|++|+-...+.+.-|+|+ |..-. .+ .| .+.++.+|+.+|.|+|-.|...+.
T Consensus 56 G~~~p~H~H~g~ee~~VL~G~--~~~~~-Gd--~~---------------------~~~~~~aGsYv~ePpGs~H~p~~~ 109 (153)
T 3bal_A 56 GSSFASHIHAGPGEYFLTKGK--MEVRG-GE--QE---------------------GGSTAYAPSYGFESSGALHGKTFF 109 (153)
T ss_dssp TEEECCEEESSCEEEEEEESE--EEETT-CG--GG---------------------TSEEEESSEEEEECTTCEESCCEE
T ss_pred CCCccCccCCCCEEEEEEEEE--EEecC-cc--cc---------------------CccccCCCeEEEcCCCCcccceeC
Confidence 466999999999999999996 44321 11 11 245889999999999999986654
Q ss_pred CC
Q 004048 551 DD 552 (776)
Q Consensus 551 de 552 (776)
++
T Consensus 110 ~~ 111 (153)
T 3bal_A 110 PV 111 (153)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 199
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=43.81 E-value=17 Score=32.36 Aligned_cols=25 Identities=32% Similarity=0.442 Sum_probs=22.1
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
.+..|++||++.||+|++=...+..
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~ 30 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS 30 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS
T ss_pred hhceecCCcEEEECCCCceeEEecC
Confidence 5669999999999999999998864
No 200
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=43.62 E-value=63 Score=34.71 Aligned_cols=84 Identities=15% Similarity=0.224 Sum_probs=54.8
Q ss_pred cHHHHHHHHHHHh--hhCC-C-cccceeEEcCCCCCcccccccCCC-----eEEEEEeeeEEEEEecCCCCCCCCCCCCC
Q 004048 441 FECLANIADGLAS--LFGQ-P-SVGANMYLTPPNSQGLASHYDDHC-----VFVCQLFGTKQWKIFAQPSVQLPRLYNPC 511 (776)
Q Consensus 441 ~p~LaeL~~aLe~--~FG~-P-~v~aNaYlTPpg~qGf~pHyD~~D-----VFVlQL~GrKrWrL~~pp~~~lPr~~~pf 511 (776)
-+.+..+.+.+.. .++. | .+-+|.|- + ++++++|.|+.. +..+-+-+.....+.....
T Consensus 177 P~~L~~l~~r~~~~~~~~~~~n~~lvN~Y~--~-G~~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~~~~---------- 243 (345)
T 3tht_A 177 PDICESFLEKWLRKGYIKHKPDQMTINQYE--P-GQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPDG---------- 243 (345)
T ss_dssp CHHHHHHHHHHHHHTSCSSCCSEEEEEEEC--T-TCCEEEECCCTTTBCSCEEEEEESSCEEEEEECTTS----------
T ss_pred CHHHHHHHHHHHhcccCCCCCCEEEEEEec--C-CCCEeeccCCchhcCCeEEEEECCCceeEEEccCCC----------
Confidence 3446667666542 2344 2 35778874 3 358999999962 5566777777777765210
Q ss_pred CCCCCcccccccccceEEEEcCCcEeeeCC----CCceeeeeC
Q 004048 512 DIVNGVEAESSMAECRQFLLREGDILYIPR----GFSHEACTE 550 (776)
Q Consensus 512 ~p~~~~~dd~g~~~~~evvLePGDVLYIPR----GwwH~a~A~ 550 (776)
....+.|++||+|.++- .|-|.....
T Consensus 244 -------------~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~ 273 (345)
T 3tht_A 244 -------------IAVPVMLPRRSLLVMTGESRYLWTHGITCR 273 (345)
T ss_dssp -------------CEEEEEECTTEEEEECTHHHHTSEEEECCC
T ss_pred -------------ceEEEEcCCCcEEEEChHHhhceEccCCcc
Confidence 12678999999999986 455776654
No 201
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=40.15 E-value=1.1e+02 Score=28.75 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=40.5
Q ss_pred ccccccCC---Ce--EEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeee
Q 004048 474 LASHYDDH---CV--FVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEAC 548 (776)
Q Consensus 474 f~pHyD~~---DV--FVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~ 548 (776)
+..|+|.. .+ -+.-+.|+=++..+....... +..++...+|+.-.|||+.||.++
T Consensus 27 l~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~--------------------~~~~~l~~~~~~~~i~Pq~wH~Ve 86 (127)
T 3bb6_A 27 FERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAE--------------------PDQVILIEAGQFAVFPPEKWHNIE 86 (127)
T ss_dssp GSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSS--------------------CSEEEEEEBTBEEECCSSCEEEEE
T ss_pred HhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcc--------------------eeEEEEeCCCCceEECCCCcEEEE
Confidence 45575543 34 366788988888775311101 115678899999999999999999
Q ss_pred eCCC
Q 004048 549 TEDD 552 (776)
Q Consensus 549 A~de 552 (776)
..++
T Consensus 87 ~lsd 90 (127)
T 3bb6_A 87 AMTD 90 (127)
T ss_dssp ESST
T ss_pred EcCC
Confidence 8654
No 202
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=39.17 E-value=27 Score=40.64 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=65.4
Q ss_pred HHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhh--hhhhhhhHHHHHHHHHhhhcchh-hHHHHHhhhhhccccchhhh
Q 004048 68 LSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLET--NEQIAADAEVVRGLVSLLRNSEK-RVLVAAANAVLDLSTTSVGR 144 (776)
Q Consensus 68 ~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~--~e~~a~d~~~~~~l~~~l~~~~~-~v~~~a~n~vld~s~t~~~~ 144 (776)
-.|+.+|..++....|-..++-++|-.+-..-+. +-....+.+.+..|+.+|.+.+. .|..+||.++-+++.....+
T Consensus 444 ~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~~~~~~ 523 (780)
T 2z6g_A 444 EALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANH 523 (780)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHHSSHHHH
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHhcCHHHH
Confidence 3444444433322256666777777665433332 11233456779999999999887 99999999999999988888
Q ss_pred hhhhcchhHHHHHHHHH
Q 004048 145 QKLLESSALEALLLIFL 161 (776)
Q Consensus 145 ~~l~~~~~l~~~~~~~~ 161 (776)
+.+.+.-+++.|..+..
T Consensus 524 ~~i~~~g~i~~Lv~lL~ 540 (780)
T 2z6g_A 524 APLREQGAIPRLVQLLV 540 (780)
T ss_dssp HHHHHTTHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHH
Confidence 88888888888886554
No 203
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=38.76 E-value=16 Score=41.71 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=22.1
Q ss_pred EEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 528 QFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 528 evvLePGDVLYIPRGwwH~a~A~de 552 (776)
...+++||+++||.|+.|+....++
T Consensus 173 v~~vr~GDviaiPaG~~~w~yN~G~ 197 (531)
T 3fz3_A 173 TRRIREGDVVAIPAGVAYWSYNDGD 197 (531)
T ss_dssp CEEEETTEEEEECTTCCEEEECCSS
T ss_pred eecccCCcEEEECCCCeEEEEeCCC
Confidence 4578999999999999999999754
No 204
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=38.43 E-value=31 Score=35.40 Aligned_cols=26 Identities=19% Similarity=0.232 Sum_probs=23.1
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
..++++|||+.+||+|+-|.-.+.+.
T Consensus 83 ~~~~~~~Gd~~~ip~G~~~~w~~~~~ 108 (238)
T 3myx_A 83 DSVTLSTGESAVIGRGTQVRIDAQPE 108 (238)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECTT
T ss_pred eEEEEcCCCEEEECCCCEEEEEecCC
Confidence 55699999999999999999988764
No 205
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=33.73 E-value=1.7e+02 Score=27.33 Aligned_cols=48 Identities=19% Similarity=0.314 Sum_probs=35.1
Q ss_pred EEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccccccccceEEEEcCCcEeeeCCCCceeeeeCCC
Q 004048 485 VCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAESSMAECRQFLLREGDILYIPRGFSHEACTEDD 552 (776)
Q Consensus 485 VlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd~g~~~~~evvLePGDVLYIPRGwwH~a~A~de 552 (776)
+.-++|+=++..+....... +..++++.+|+.-.|||..||.+...++
T Consensus 42 L~Vl~G~Lkf~~~~e~~~~~--------------------~~~~~~~~~~~~~~i~Pq~wHrVe~sdD 89 (119)
T 3dl3_A 42 ICVMEGVVTYYGFANSEATE--------------------PEIKVVINAGQFATSPPQYWHRIELSDD 89 (119)
T ss_dssp EEEEESEEEEEEESSTTCCS--------------------CSEEEEEETTEEEEECTTCEEEEEECTT
T ss_pred EEEEEeEEEEEEEcCCCCCc--------------------ccEEEEeCCCCCceeCCCceEEEEECCC
Confidence 56678888888876321100 1266799999999999999999995554
No 206
>4dpz_X HRAS-like suppressor 2; alpha/beta fold, enzyme phospholipid acyltransferase, hydrol transferase; 1.25A {Homo sapiens} PDB: 4fa0_A 2kyt_A
Probab=33.04 E-value=24 Score=33.47 Aligned_cols=30 Identities=37% Similarity=0.543 Sum_probs=23.6
Q ss_pred EEcCCcEeeeCCC-CceeeeeCCCccCCCccceeEEE
Q 004048 530 LLREGDILYIPRG-FSHEACTEDDGRTGLAEFSLHLT 565 (776)
Q Consensus 530 vLePGDVLYIPRG-wwH~a~A~deg~~~~~~~SLHLT 565 (776)
.++|||++|++++ +-|.+.-.+++ .=+|.+
T Consensus 7 ~~~pGDlv~~~~~~~~H~gIYvG~g------~viH~~ 37 (137)
T 4dpz_X 7 RPRLGDLIEISRFGYAHWAIYVGDG------YVVHLA 37 (137)
T ss_dssp CCCTTCEEEEECSSSEEEEEEEETT------EEEEEE
T ss_pred cCCCCCEEEEeCCCCCEEEEEeCCC------eEEecc
Confidence 5789999999865 56999988775 567775
No 207
>4dot_A Group XVI phospholipase A2; alpha/beta fold, phospholipase/acyltransferase, phosphatidyl phosphatidylethanolamine, membrane, hydrolase; 1.96A {Homo sapiens}
Probab=30.77 E-value=25 Score=33.53 Aligned_cols=30 Identities=33% Similarity=0.479 Sum_probs=23.8
Q ss_pred EEcCCcEeeeCC-CCceeeeeCCCccCCCccceeEEE
Q 004048 530 LLREGDILYIPR-GFSHEACTEDDGRTGLAEFSLHLT 565 (776)
Q Consensus 530 vLePGDVLYIPR-GwwH~a~A~deg~~~~~~~SLHLT 565 (776)
.++|||++|+++ ++.|.+.-.+++ .=+|.+
T Consensus 7 ~~~pGDlv~~~~~~~~H~gIYvG~g------~viH~~ 37 (140)
T 4dot_A 7 EPKPGDLIEIFRPFYRHWAIYVGDG------YVVHLA 37 (140)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEETT------EEEEEE
T ss_pred CCCCCCEEEEeCCCCCEEEEEeCCC------eEEecC
Confidence 678999999885 567999988775 467765
No 208
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=29.69 E-value=45 Score=39.71 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=54.7
Q ss_pred hhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccchhhhhhhhcchhHHHHHHH
Q 004048 101 TNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTTSVGRQKLLESSALEALLLI 159 (776)
Q Consensus 101 ~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t~~~~~~l~~~~~l~~~~~~ 159 (776)
-|+..-.|.+++..|+.++.+.+..+-+.|+-+++++|...-.|..+.+--+++.|+.+
T Consensus 448 ~~~~~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~l 506 (778)
T 3opb_A 448 FNEKYILRTELISFLKREMHNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEY 506 (778)
T ss_dssp HHHHHTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHH
Confidence 37788889999999999999999999999999999999999999999999999988855
No 209
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=29.18 E-value=1e+02 Score=30.89 Aligned_cols=26 Identities=12% Similarity=0.142 Sum_probs=22.4
Q ss_pred cceEEEEcCCcEeeeCCCCceeeeeC
Q 004048 525 ECRQFLLREGDILYIPRGFSHEACTE 550 (776)
Q Consensus 525 ~~~evvLePGDVLYIPRGwwH~a~A~ 550 (776)
....+.++|||++++=...||.+...
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N 251 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQN 251 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCB
T ss_pred CeeecccCCCcEEEEcCCceecCCCC
Confidence 34678999999999999999998754
No 210
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=26.60 E-value=31 Score=35.45 Aligned_cols=23 Identities=13% Similarity=0.395 Sum_probs=17.9
Q ss_pred eEEEEcCCcEeeeCCCCceeeee
Q 004048 527 RQFLLREGDILYIPRGFSHEACT 549 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A 549 (776)
..++++|||+++||+|+.=.-..
T Consensus 205 ~~~~~~aGD~~~~P~G~~~tWev 227 (238)
T 3myx_A 205 SSLTVNTGDTVFVAQGAPCKWTS 227 (238)
T ss_dssp CEEEECTTCEEEECTTCEEEEEE
T ss_pred CEEEECCCCEEEECCCCEEEEEE
Confidence 45799999999999998544333
No 211
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=26.10 E-value=68 Score=36.72 Aligned_cols=51 Identities=10% Similarity=0.046 Sum_probs=29.9
Q ss_pred HHHHHhhcCCCCCccchhHHHhhhhhhhh-hhhhhhhhhhHHHHHHHHHhhhcc
Q 004048 70 LLPVLLNSKCSGGIAGLSAEIVGAASLLS-LETNEQIAADAEVVRGLVSLLRNS 122 (776)
Q Consensus 70 llp~ll~s~~~~~~a~~s~e~~g~a~l~s-~e~~e~~a~d~~~~~~l~~~l~~~ 122 (776)
++=.||+.+.. +|...|+.+++-.++.. +|+=..+. ..+|+..|..+|.+.
T Consensus 80 ll~~lL~D~~~-~Vr~~A~gaLrnL~~~~g~d~~~~l~-~~~il~~L~~~l~~~ 131 (684)
T 4gmo_A 80 VLTETLTDNNI-DSRAAGWEILKVLAQEEEADFCVHLY-RLDVLTAIEHAAKAV 131 (684)
T ss_dssp HHHTTTTCSCH-HHHHHHHHHHHHHHHHSCHHHHHHHH-HTTHHHHHHHHHHHH
T ss_pred HHHHHcCCCCH-HHHHHHHHHHHHHHhhcCchHHHHHH-HcChHHHHHHHHHhh
Confidence 34445566666 77766776666555543 34433333 455888888887653
No 212
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=22.87 E-value=1.8e+02 Score=33.21 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=59.9
Q ss_pred HHHHH--hhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHH-HHHhhhcchhhHHHHHhhhhhccccc--hhhh
Q 004048 70 LLPVL--LNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRG-LVSLLRNSEKRVLVAAANAVLDLSTT--SVGR 144 (776)
Q Consensus 70 llp~l--l~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~-l~~~l~~~~~~v~~~a~n~vld~s~t--~~~~ 144 (776)
++|+| |.|..+ +.=.-+|-.++ -|.+-..+.++-.-+++|.. |..+|...+..|-++|+-+.=+|+.- .-.+
T Consensus 36 i~Pll~~L~S~~~-~~r~~A~~al~--~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~ 112 (684)
T 4gmo_A 36 ILPVLKDLKSPDA-KSRTTAAGAIA--NIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFC 112 (684)
T ss_dssp THHHHHHHSSSCC-SHHHHHHHHHH--HHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHcCCCCH-HHHHHHHHHHH--HHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHH
Confidence 34544 444433 33333333333 33333344444444555555 45678999999999999998777654 3456
Q ss_pred hhhhcchhHHHHHHHHHHH-hccc
Q 004048 145 QKLLESSALEALLLIFLQV-HRSS 167 (776)
Q Consensus 145 ~~l~~~~~l~~~~~~~~~~-~~~~ 167 (776)
.++...-+++.|+.++.+. +++.
T Consensus 113 ~~l~~~~il~~L~~~l~~~~~~~~ 136 (684)
T 4gmo_A 113 VHLYRLDVLTAIEHAAKAVLETLT 136 (684)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHhhHHHHh
Confidence 7888888999999888777 5444
No 213
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=22.75 E-value=1.2e+02 Score=31.44 Aligned_cols=78 Identities=15% Similarity=0.129 Sum_probs=47.8
Q ss_pred CCcccccccC--CCeEEEEEeeeEEEEEecCCCCCCCCCCCCCCCCCCcccc--cccccceEEEEcCCcEeeeCCCCcee
Q 004048 471 SQGLASHYDD--HCVFVCQLFGTKQWKIFAQPSVQLPRLYNPCDIVNGVEAE--SSMAECRQFLLREGDILYIPRGFSHE 546 (776)
Q Consensus 471 ~qGf~pHyD~--~DVFVlQL~GrKrWrL~~pp~~~lPr~~~pf~p~~~~~dd--~g~~~~~evvLePGDVLYIPRGwwH~ 546 (776)
+|-.+.||-. .+-|+.-.-|.=.-.||.......+. . .++....+. ...+...+++|.||+-+-||||.||.
T Consensus 116 gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~-~---~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~ 191 (246)
T 3kmh_A 116 AQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTA-D---SDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHS 191 (246)
T ss_dssp TCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBC-C---SCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEE
T ss_pred CCCCCcccCCCccccEEecCCCeEEEEEEecCCCcccc-C---CCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEE
Confidence 3555665554 56788777777777888643211110 0 111111111 11123477899999999999999999
Q ss_pred eeeCCC
Q 004048 547 ACTEDD 552 (776)
Q Consensus 547 a~A~de 552 (776)
-.+.++
T Consensus 192 F~ae~g 197 (246)
T 3kmh_A 192 FWAEAG 197 (246)
T ss_dssp EEECTT
T ss_pred EEecCC
Confidence 999865
No 214
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=22.56 E-value=2.3e+02 Score=33.01 Aligned_cols=136 Identities=17% Similarity=0.086 Sum_probs=80.6
Q ss_pred hHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhccccchhhhhh
Q 004048 67 ILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLETNEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLSTTSVGRQK 146 (776)
Q Consensus 67 ~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~t~~~~~~ 146 (776)
++.++|.|.....+.-|...+|.++|.-+=. +..|. ..=..++..|+..| . .+|..+||.|+.++... .+..
T Consensus 506 l~~~l~~l~~~d~~~~vr~~a~~~l~~~~~~-l~~~~--~~l~~vl~~l~~~l-~--~~v~~~A~~al~~l~~~--~~~~ 577 (971)
T 2x1g_F 506 LMRVLAEIPYEKLNVKLLGTALETMGSYCNW-LMENP--AYIPPAINLLVRGL-N--SSMSAQATLGLKELCRD--CQLQ 577 (971)
T ss_dssp HHHHHHHSCTTTSCHHHHHHHHHHHHHTHHH-HC------CHHHHHHHHHHHH-H--SSCHHHHHHHHHHHHHH--CHHH
T ss_pred HHHHHHhcCccccCHHHHHHHHHHHHHHHHH-HhcCH--HHHHHHHHHHHHHh-C--hHHHHHHHHHHHHHHHH--HHHh
Confidence 4445555543212336778889999976521 11121 12235777788777 2 78999999999999843 2444
Q ss_pred hhcchhHHHHHHHHHHHhccccccccccCCCCCccccccccccchhhHHHHHHHhHhhhccchhhhhcchHHHHHHHHHH
Q 004048 147 LLESSALEALLLIFLQVHRSSTLVSLCAGENGNEASLCIACEEDEFLVLLLDAAIVLINSCDIEQLLRIPRKLYESLFVF 226 (776)
Q Consensus 147 l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~n~~~v~~l~~~~~~~~~~~~~~ 226 (776)
|. +-++.+|..+.++-.. +.-.++....+++++..++++...++. ......++.-
T Consensus 578 l~--p~~~~ll~~l~~~l~~-------------------~~~~~~~~~~~~~ai~~i~~~~~~~~~----~~~~~~ll~~ 632 (971)
T 2x1g_F 578 LK--PYADPLLNACHASLNT-------------------GRMKNSDSVRLMFSIGKLMSLLRPEEI----PKYLDIIVSP 632 (971)
T ss_dssp HH--HHHHHHHHHHHHHHHS-------------------TTSCHHHHHHHHHHHHHHHHTSCTTHH----HHHHHHHHHH
T ss_pred cc--ccHHHHHHHHHHHHcC-------------------CCCChHHHHHHHHHHHHHHHhCCHHHH----HHHHHHHHHH
Confidence 53 6677777665555111 011235556677888877775442222 3355666777
Q ss_pred HHHHHHHHH
Q 004048 227 LKELWIKVR 235 (776)
Q Consensus 227 l~~~w~~~~ 235 (776)
+.+.|.++.
T Consensus 633 l~~~l~~~~ 641 (971)
T 2x1g_F 633 CFEELQAIC 641 (971)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777787764
No 215
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=22.37 E-value=61 Score=34.01 Aligned_cols=24 Identities=21% Similarity=0.497 Sum_probs=20.5
Q ss_pred eEEEEcCCcEeeeCCCCceeeeeCC
Q 004048 527 RQFLLREGDILYIPRGFSHEACTED 551 (776)
Q Consensus 527 ~evvLePGDVLYIPRGwwH~a~A~d 551 (776)
....++-||++-+|+|+ |.+.+..
T Consensus 212 e~~~V~~~d~VlvP~Gy-Hp~~a~p 235 (270)
T 2qjv_A 212 ECMAVYNRDVVXVPXGY-HPVATIA 235 (270)
T ss_dssp EEEEEETTCEEEESSSB-CCEEECT
T ss_pred eEEEEECCCEEecCCCc-CCCcCCC
Confidence 45799999999999999 9977653
No 216
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=20.01 E-value=1.9e+02 Score=26.71 Aligned_cols=93 Identities=17% Similarity=0.208 Sum_probs=50.8
Q ss_pred chHHHHHHHHHhccCCCchHHHHHHHHhhhhccccCCCCCCCchhhHHHHHHHhhcCCCCCccchhHHHhhhhhhhhhhh
Q 004048 22 NSIFAILVAALSNSNNNYSEFIIKKCLNRLRLSLLSQSQPTLPIPILSLLPVLLNSKCSGGIAGLSAEIVGAASLLSLET 101 (776)
Q Consensus 22 ~~~f~~l~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~~~~~~llp~ll~s~~~~~~a~~s~e~~g~a~l~s~e~ 101 (776)
....+.|+..+.. .++....-.=++|.++. . +..+-.|+. +|.+... .|-..+++.+|...
T Consensus 80 ~~~~~~L~~~l~~-~~~~vr~~a~~aL~~~~------~----~~~~~~L~~-~l~d~~~-~vr~~a~~aL~~~~------ 140 (211)
T 3ltm_A 80 ERAVEPLIKALKD-EDGWVRQSAAVALGQIG------D----ERAVEPLIK-ALKDEDW-FVRIAAAFALGEIG------ 140 (211)
T ss_dssp GGGHHHHHHHTTC-SSHHHHHHHHHHHHHHC------C----GGGHHHHHH-HTTCSSH-HHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHcC-CCHHHHHHHHHHHHHhC------c----HHHHHHHHH-HHhCCCH-HHHHHHHHHHHHcC------
Confidence 4566777777633 23333333334454443 1 111222222 4455444 56666666666532
Q ss_pred hhhhhhhHHHHHHHHHhhhcchhhHHHHHhhhhhcccc
Q 004048 102 NEQIAADAEVVRGLVSLLRNSEKRVLVAAANAVLDLST 139 (776)
Q Consensus 102 ~e~~a~d~~~~~~l~~~l~~~~~~v~~~a~n~vld~s~ 139 (776)
+.+.+..|+.+|...+..|-.+|+.++-.+..
T Consensus 141 ------~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~ 172 (211)
T 3ltm_A 141 ------DERAVEPLIKALKDEDGWVRQSAADALGEIGG 172 (211)
T ss_dssp ------CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS
T ss_pred ------CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc
Confidence 34566777777777777777777777776643
Done!