Query 004052
Match_columns 776
No_of_seqs 486 out of 2732
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 12:42:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004052.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004052hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qaj_A Glutamine synthetase; A 100.0 5.6E-93 1.9E-97 794.8 31.6 353 402-773 12-369 (444)
2 4hpp_A Probable glutamine synt 100.0 2.7E-92 9.1E-97 788.2 35.1 355 405-773 4-368 (443)
3 3ng0_A Glutamine synthetase; G 100.0 7.8E-91 2.7E-95 785.0 35.8 356 401-773 10-397 (473)
4 4acf_A Glutamine synthetase 1; 100.0 5.8E-88 2E-92 766.4 38.2 359 400-773 18-410 (486)
5 1f52_A Glutamine synthetase; A 100.0 7.9E-87 2.7E-91 753.1 35.9 354 402-773 8-393 (468)
6 2j9i_A Glutamate-ammonia ligas 100.0 1.4E-79 4.7E-84 684.0 17.8 336 402-773 8-355 (421)
7 3fky_A Glutamine synthetase; b 100.0 1.3E-78 4.6E-83 664.7 24.6 330 404-765 19-358 (370)
8 2ojw_A Glutamine synthetase; a 100.0 5.4E-77 1.9E-81 655.0 25.5 331 398-762 33-381 (384)
9 2d3a_A Glutamine synthetase; l 100.0 3.6E-75 1.2E-79 635.1 24.6 325 404-762 14-354 (356)
10 3o6x_A Glutamine synthetase; t 100.0 6.8E-60 2.3E-64 538.2 17.8 284 467-768 144-506 (729)
11 2qpx_A Predicted metal-depende 100.0 1.9E-57 6.6E-62 503.3 17.4 362 3-383 2-373 (376)
12 1j5s_A Uronate isomerase; TM00 100.0 3E-53 1E-57 469.8 21.2 359 4-379 27-462 (463)
13 3iac_A Glucuronate isomerase; 100.0 6.5E-52 2.2E-56 453.7 25.7 362 4-381 20-473 (473)
14 2q01_A Uronate isomerase; stru 100.0 1.5E-51 5E-56 459.9 27.4 363 4-385 26-477 (497)
15 2qee_A BH0493 protein; amidohy 100.0 1.3E-36 4.5E-41 331.3 14.5 336 4-384 13-420 (437)
16 3irs_A Uncharacterized protein 99.8 3.4E-19 1.2E-23 190.2 14.5 191 160-384 87-284 (291)
17 3ij6_A Uncharacterized metal-d 99.8 2.9E-18 9.9E-23 184.8 13.3 193 155-381 86-306 (312)
18 4inf_A Metal-dependent hydrola 99.7 5.4E-18 1.8E-22 186.8 12.0 189 155-380 136-373 (373)
19 3nur_A Amidohydrolase; TIM bar 99.7 1.3E-17 4.4E-22 182.9 8.7 191 155-382 118-355 (357)
20 3cjp_A Predicted amidohydrolas 99.7 3.6E-16 1.2E-20 164.7 15.0 180 159-382 81-266 (272)
21 2dvt_A Thermophilic reversible 99.6 4.6E-16 1.6E-20 168.0 12.9 186 159-381 88-325 (327)
22 2ffi_A 2-pyrone-4,6-dicarboxyl 99.6 2E-15 6.9E-20 160.1 13.6 187 159-383 76-282 (288)
23 2wm1_A 2-amino-3-carboxymucona 99.6 2.4E-15 8.4E-20 163.3 12.7 188 159-382 104-332 (336)
24 2f6k_A Metal-dependent hydrola 99.6 2.3E-15 7.9E-20 161.0 11.8 189 159-380 84-307 (307)
25 2hbv_A 2-amino-3-carboxymucona 99.6 4.5E-15 1.5E-19 161.2 13.0 186 159-381 108-333 (334)
26 4i6k_A Amidohydrolase family p 99.6 4.8E-15 1.6E-19 158.2 12.2 185 160-382 90-293 (294)
27 4d9a_A 2-pyrone-4,6-dicarbaxyl 99.6 1.7E-15 5.9E-20 162.5 8.5 187 158-383 89-295 (303)
28 4do7_A Amidohydrolase 2; enzym 99.6 1.1E-14 3.7E-19 156.2 13.5 151 210-384 118-292 (303)
29 2gwg_A 4-oxalomesaconate hydra 99.5 1.4E-14 4.8E-19 158.4 11.4 191 157-380 98-332 (350)
30 4dzi_A Putative TIM-barrel met 99.5 1.3E-14 4.6E-19 162.1 9.3 192 153-383 148-398 (423)
31 2gzx_A Putative TATD related D 99.3 1.8E-11 6.3E-16 127.7 11.7 144 209-381 104-256 (265)
32 1j6o_A TATD-related deoxyribon 99.2 2.1E-11 7.1E-16 128.2 10.2 146 209-381 115-266 (268)
33 1yix_A Deoxyribonuclease YCFH; 99.1 2.8E-10 9.7E-15 118.7 9.7 146 209-382 106-258 (265)
34 1zzm_A Putative deoxyribonucle 98.9 4.2E-09 1.4E-13 109.6 12.9 145 210-381 110-259 (259)
35 1xwy_A DNAse TATD, deoxyribonu 98.8 7.2E-09 2.4E-13 108.2 9.4 145 210-381 108-263 (264)
36 2y1h_A Putative deoxyribonucle 98.7 1.3E-07 4.6E-12 99.0 14.6 143 210-381 122-266 (272)
37 2xio_A Putative deoxyribonucle 98.6 7E-07 2.4E-11 95.2 15.4 145 210-382 123-294 (301)
38 1bf6_A Phosphotriesterase homo 98.4 2.7E-06 9.1E-11 89.5 14.0 147 214-379 138-291 (291)
39 3rcm_A TATD family hydrolase; 98.3 1.3E-06 4.6E-11 92.3 10.0 152 211-388 111-272 (287)
40 2vc7_A Aryldialkylphosphatase; 98.1 1.4E-05 4.8E-10 85.2 13.4 149 214-379 151-314 (314)
41 3gg7_A Uncharacterized metallo 98.1 5.9E-06 2E-10 85.7 9.7 140 211-382 101-246 (254)
42 3ovg_A Amidohydrolase; structu 98.1 4.1E-05 1.4E-09 83.5 16.6 155 215-383 170-333 (363)
43 3pnz_A Phosphotriesterase fami 98.1 1.4E-05 4.7E-10 86.2 11.4 151 216-381 170-329 (330)
44 3k2g_A Resiniferatoxin-binding 98.0 4.4E-05 1.5E-09 83.4 14.2 153 215-383 191-357 (364)
45 3gtx_A Organophosphorus hydrol 97.9 6E-05 2E-09 81.5 12.8 150 216-379 175-339 (339)
46 2ob3_A Parathion hydrolase; me 97.9 8.7E-05 3E-09 80.0 13.0 148 216-379 150-325 (330)
47 3tn4_A Phosphotriesterase; lac 97.9 0.00036 1.2E-08 75.9 17.6 156 211-379 190-359 (360)
48 3guw_A Uncharacterized protein 97.8 1.3E-05 4.4E-10 83.6 4.9 139 214-383 110-251 (261)
49 3rhg_A Putative phophotriester 97.8 0.00012 4.2E-09 79.8 12.7 155 215-384 180-348 (365)
50 1r8g_A Hypothetical protein YB 97.7 0.00029 9.7E-09 77.2 14.6 95 583-694 48-169 (372)
51 3ipw_A Hydrolase TATD family p 97.6 0.00037 1.3E-08 74.7 13.0 142 213-381 153-323 (325)
52 3e2v_A 3'-5'-exonuclease; stru 96.7 0.041 1.4E-06 60.2 17.1 100 212-328 177-306 (401)
53 2gwd_A Glutamate cysteine liga 96.6 0.012 4.2E-07 65.8 12.7 135 523-694 33-214 (449)
54 2z26_A Dihydroorotase, dhoase; 96.2 0.0048 1.6E-07 66.7 6.0 78 213-294 119-200 (347)
55 2i5g_A Amidohydrolase; NYSGXRC 96.1 0.021 7.2E-07 61.0 10.8 68 300-379 224-320 (325)
56 3ly0_A Dipeptidase AC. metallo 93.3 0.15 5.2E-06 54.9 7.8 71 300-380 281-353 (364)
57 3b40_A PVDM, probable dipeptid 92.6 0.49 1.7E-05 52.1 10.9 69 301-379 335-405 (417)
58 3id7_A Dipeptidase; streptomyc 92.6 0.36 1.2E-05 52.7 9.7 71 300-380 295-368 (400)
59 1itu_A Renal dipeptidase; glyc 92.5 0.46 1.6E-05 51.4 10.3 71 300-380 263-336 (369)
60 3neh_A Renal dipeptidase famil 92.0 0.99 3.4E-05 47.8 11.9 70 300-380 238-310 (318)
61 2rag_A Dipeptidase; aminohydro 90.5 0.51 1.7E-05 51.9 8.1 69 301-379 336-406 (417)
62 3ln6_A Glutathione biosynthesi 89.9 1.4 4.9E-05 52.2 11.8 134 584-717 54-224 (750)
63 3pnu_A Dihydroorotase; TIM bar 88.6 2.6 9E-05 45.3 11.9 75 212-294 134-211 (359)
64 2vun_A Enamidase; nicotinate d 88.3 8.4 0.00029 40.9 15.8 143 212-380 172-320 (386)
65 3gnh_A L-lysine, L-arginine ca 87.7 14 0.00049 39.2 17.3 139 211-384 204-362 (403)
66 3hm7_A Allantoinase; metallo-d 85.8 4.8 0.00017 44.1 12.4 166 212-383 167-380 (448)
67 3ln7_A Glutathione biosynthesi 85.1 4.8 0.00016 47.7 12.3 112 584-695 53-198 (757)
68 2z00_A Dihydroorotase; zinc bi 85.0 3.7 0.00013 44.5 10.7 25 212-236 153-177 (426)
69 3mpg_A Dihydroorotase, dhoase; 77.2 8.8 0.0003 41.7 10.3 164 212-381 157-364 (428)
70 3e74_A Allantoinase; (beta/alp 76.4 13 0.00045 41.2 11.6 164 212-381 185-395 (473)
71 3gri_A Dihydroorotase, dhoase; 75.9 7.3 0.00025 42.4 9.2 163 212-380 156-362 (424)
72 1va6_A Glutamate--cysteine lig 75.8 3.4 0.00011 46.6 6.3 109 584-694 56-202 (518)
73 4f0r_A 5-methylthioadenosine/S 68.1 14 0.00049 40.0 9.2 158 212-384 198-361 (447)
74 3nqb_A Adenine deaminase 2; PS 67.9 47 0.0016 38.1 13.9 136 212-381 200-337 (608)
75 2ics_A Adenine deaminase; TIM 67.3 44 0.0015 35.0 12.7 137 215-382 169-319 (379)
76 3sfw_A Dihydropyrimidinase; hy 66.3 60 0.0021 35.4 14.0 165 212-382 162-380 (461)
77 4aql_A Guanine deaminase; hydr 65.1 1.3E+02 0.0043 33.0 16.4 158 212-383 241-407 (476)
78 2qs8_A XAA-Pro dipeptidase; am 62.3 96 0.0033 32.9 14.5 138 211-383 213-371 (418)
79 3feq_A Putative amidohydrolase 61.3 51 0.0017 35.1 11.9 138 211-384 209-366 (423)
80 3gip_A N-acyl-D-glutamate deac 60.4 59 0.002 35.8 12.6 58 318-382 358-416 (480)
81 3dc8_A Dihydropyrimidinase; TI 59.3 59 0.002 36.0 12.3 160 213-382 160-377 (490)
82 4dzh_A Amidohydrolase; adenosi 55.3 1.6E+02 0.0056 31.9 15.0 156 214-384 209-370 (472)
83 1nxi_A Conserved hypothetical 55.0 29 0.00098 31.6 7.1 91 510-627 21-114 (132)
84 3be7_A Zn-dependent arginine c 54.8 1.1E+02 0.0038 32.2 13.2 135 212-381 204-358 (408)
85 3lnp_A Amidohydrolase family p 54.5 1.4E+02 0.0048 32.1 14.3 155 214-383 227-387 (468)
86 3nzt_A Glutamate--cysteine lig 54.0 12 0.00042 42.0 5.3 143 523-694 31-208 (525)
87 2r8c_A Putative amidohydrolase 53.3 1.6E+02 0.0054 31.3 14.3 25 211-235 212-236 (426)
88 4dyk_A Amidohydrolase; adenosi 53.0 1.9E+02 0.0065 30.9 14.9 157 213-384 201-363 (451)
89 2fty_A Dihydropyrimidinase; al 50.6 67 0.0023 36.3 11.0 35 344-382 400-435 (559)
90 1zpv_A ACT domain protein; str 49.4 13 0.00045 30.7 3.6 66 566-633 17-82 (91)
91 3h4u_A Amidohydrolase; signatu 40.8 54 0.0019 35.7 8.1 154 213-382 239-398 (479)
92 1xrt_A Dihydroorotase, dhoase; 37.8 1.7E+02 0.0059 31.6 11.6 25 212-236 204-228 (467)
93 3ooq_A Amidohydrolase; structu 37.0 1.5E+02 0.0052 31.2 10.7 135 220-384 213-350 (396)
94 2ood_A BLR3880 protein; PSI-II 36.7 4.3E+02 0.015 28.4 15.1 25 212-236 212-237 (475)
95 1rk6_A D-aminoacylase; TIM bar 35.4 81 0.0028 34.7 8.4 56 319-381 373-429 (496)
96 1gkp_A Hydantoinase; hydrolase 35.1 4E+02 0.014 28.2 14.0 24 212-235 161-184 (458)
97 4gxw_A Adenosine deaminase; am 32.4 47 0.0016 35.8 5.5 84 147-236 129-219 (380)
98 3rys_A Adenosine deaminase 1; 31.6 43 0.0015 35.5 5.0 158 147-331 113-286 (343)
99 3ose_A Serine/threonine-protei 31.4 75 0.0026 28.2 5.8 68 559-626 34-120 (120)
100 1gkr_A Hydantoinase, non-ATP d 30.4 4.7E+02 0.016 27.6 13.5 34 345-382 343-376 (458)
101 3ig5_A Glutamate-cysteine liga 30.0 53 0.0018 37.7 5.5 97 512-623 32-135 (692)
102 3ls9_A Triazine hydrolase; atr 29.6 3.9E+02 0.013 28.3 12.6 69 212-284 217-289 (456)
103 3g8r_A Probable spore coat pol 27.8 56 0.0019 34.7 5.0 68 218-294 126-201 (350)
104 2qt3_A N-isopropylammelide iso 26.4 5.5E+02 0.019 26.5 14.1 23 214-236 198-220 (403)
105 1v5s_A MAP/microtubule affinit 25.7 1.1E+02 0.0039 27.4 5.9 69 558-626 33-120 (126)
106 2paj_A Putative cytosine/guani 24.3 2.3E+02 0.0079 30.6 9.6 107 212-326 227-337 (492)
107 3icj_A Uncharacterized metal-d 22.2 5.1E+02 0.017 28.8 12.0 146 211-381 326-481 (534)
108 1v77_A PH1877P, hypothetical p 22.0 1.2E+02 0.0041 29.5 5.9 109 250-379 88-208 (212)
109 2fao_A Probable ATP-dependent 21.2 1.2E+02 0.0041 31.5 5.9 125 575-724 111-241 (309)
110 1u8s_A Glycine cleavage system 20.5 1.2E+02 0.0042 28.6 5.6 67 565-633 104-178 (192)
No 1
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=100.00 E-value=5.6e-93 Score=794.81 Aligned_cols=353 Identities=30% Similarity=0.506 Sum_probs=322.7
Q ss_pred hhccCCceEEEEEEecCCCCcceEEecchhhhHHHhhccccccccccccccccCCCCCCCCCCCCCcEEEEeecCCceec
Q 004052 402 DAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (776)
Q Consensus 402 ~~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~ 481 (776)
.+++++|+||+++|+|++|++|+|.||+++|.+.+ ++|++|+++++. +.. ..+.+|++|+||++|++++
T Consensus 12 ~~~~~~i~~v~l~~~D~~G~~r~k~ip~~~~~~~~-~~G~~fdgssi~------g~~----~~~~~D~~l~PD~~T~~~~ 80 (444)
T 3qaj_A 12 LVKEENVKYIRLQFTDILGTIKNVEIPVSQLGKAL-DNKVMFDGSSIE------GFV----RIEESDMYLYPDLNTFVIF 80 (444)
T ss_dssp HHHHHTCCEEEEEEECSSSCEEEEEEEGGGHHHHH-TTCCEEETTTST------TSS----CTTCCEEECCBCGGGCEEE
T ss_pred HHHhCCCCEEEEEEECCCCCEEEEEEeHHHHHHHH-hCCccccCcccc------Ccc----CCCCCCEEEEEecCceEEC
Confidence 34566999999999999999999999999998754 689999876541 111 1246899999999999999
Q ss_pred cCCCC---ceEEEEEccCCCCCcCCCChHHHHHHHHHHHHHhcCce-eEEeeeeEEEEEeecccCCCCCccccCCCCccc
Q 004052 482 PWQKQ---EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLV-LNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCS 557 (776)
Q Consensus 482 P~~~~---~a~v~~d~~~~~g~p~~~~pR~~L~~~~~~~~~~~G~~-~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~ 557 (776)
||.++ +++|+||++++||+|++.|||++|||++++++ +.|++ +++|+|+|||||+.. .++.+...|.++++||+
T Consensus 81 Pw~~~~~~~a~v~cd~~~~dG~p~~~~pR~iLkr~~~~~~-~~G~~~~~~g~E~EF~l~~~~-~~g~~~~~~~~~~~y~~ 158 (444)
T 3qaj_A 81 PWTAEKGKVARFICDIYNPDGTPFEGDPRNNLKRILKEME-DLGFSDFNLGPEPEFFLFKLD-EKGEPTLELNDKGGYFD 158 (444)
T ss_dssp HHHHHHHCEEEEEBCCBCTTSCBCSSCHHHHHHHHHHHHH-TTTCCEEEEEEEECEEEEEEC-SSSCEEEEESCCCCTTC
T ss_pred ccccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCCeeeEEeceEEEEEecC-CCCCCCCcCcCCCCccc
Confidence 99876 79999999999999999999999999999998 58999 999999999999973 23333445667788998
Q ss_pred CCccccchHHHHHHHHHHHhCCCCeeeeccCCCCCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCeeEecccccCC
Q 004052 558 TAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALD 637 (776)
Q Consensus 558 ~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpKP~~~ 637 (776)
..+.+...+++++|+++|+++||+||++|+|+|||||||++.|++++++||+++++|++||+||++||+.|||||||+.+
T Consensus 159 ~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~ 238 (444)
T 3qaj_A 159 LAPTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKTIARKHGLHATFMPKPLFG 238 (444)
T ss_dssp CTTTSCCTTHHHHHHHHHHTTTCCEEEEEECSSTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECCSCSSTT
T ss_pred cCCCcchHHHHHHHHHHHHHCCCCeEEeEcCcCCCcEEEecCCChHHHHHHHHHHHHHHHHHHHHHcCCEEEEcCCcCCC
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeeeccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCCCcccCCCCCCcCCcccccccCCC
Q 004052 638 DIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQCWGKENR 717 (776)
Q Consensus 638 ~~GsG~HvH~Sl~~~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~~~WG~~NR 717 (776)
.+|||||+|+|||++|+|+|. |++++.+||+++++||||||+|++++++|++||+||||||+|++|||++++||.+||
T Consensus 239 ~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGlL~h~~~l~a~~~PtvNSYkRl~pg~~AP~~~~Wg~~NR 316 (444)
T 3qaj_A 239 VNGSGMHCNLSLFKNGVNAFF--DENADLQLSETAKHFIAGIVKHATSFTAVTNPTVNSYKRLVPGYEAPCYVAWSAQNR 316 (444)
T ss_dssp SCCCCEEEEEEEEETTEETTC--CTTSSSSCCHHHHHHHHHHHHTHHHHHHHHSCSSTHHHHSCTTSSSSCBCCEESSCS
T ss_pred CCCCcceeeeccccCCCcccC--CCCcccchHHHHHHHHHHHHHHHHHHHHHHCCCCcccccCCCCCcCCCcceeecCCC
Confidence 999999999999999999998 666778999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhhhhc-CCCCCCcC
Q 004052 718 EAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIG 773 (776)
Q Consensus 718 ~a~iRi~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~Gi~~-l~~p~p~~ 773 (776)
+++||||... ++++|||+|++|++|||||++||+|+|||+||++ ++||+|++
T Consensus 317 sa~iRip~~~----~~~~RiE~R~pd~~aNPYLa~Aa~LaAGldGI~~~l~p~~p~~ 369 (444)
T 3qaj_A 317 SPLIRIPASR----GISTRVEVRSVDPAANPYLALSVLLAAGLDGIKNKLEAPAPID 369 (444)
T ss_dssp SSSEECCSCC----GGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred cceEeeccCC----CCCceEEecCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCcC
Confidence 9999999622 3458999999999999999999999999999999 99999975
No 2
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.7e-92 Score=788.18 Aligned_cols=355 Identities=31% Similarity=0.468 Sum_probs=320.8
Q ss_pred cCCceEEEEEEecCCCCcceEEecchhhhHHHhhccccccccccccccccCCCCCCCCCCCCCcEEEEeecCCceeccCC
Q 004052 405 ESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQ 484 (776)
Q Consensus 405 ~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~P~~ 484 (776)
-++|+||+++|+|++|++|+|+||+++|.+.+ ++|++|+++.++++.+ +....++++++++|++|+||++|++++||.
T Consensus 4 ~~~v~~v~l~~~D~~G~~r~k~vp~~~~~~~~-~~G~~f~~s~~~~~~~-~~~~~~~~~~~~~D~~l~PD~~T~~~~Pw~ 81 (443)
T 4hpp_A 4 LQPVRLVSFVTTDLAGITRGRSLPLATLEEQL-ASGCGWVPANSSLTPQ-DLIDESSPWGSHGDLRLLPDPNSRVRVEQG 81 (443)
T ss_dssp CCCCCEEEEEEECTTSCEEEEEEEGGGHHHHH-TTCEEECGGGGGCCTT-SCCCTTCSCSSSCCEEEEECGGGCEEECCC
T ss_pred CCCCCEEEEEEECCCCCEEEEEEEHHHHHHHH-hCCcccCchhheeecc-CccccccCCCCCCCEEEEEcccceEECCcc
Confidence 36899999999999999999999999998864 6899999987777653 333333445678999999999999999999
Q ss_pred C-----CceEEEEEccCCCCCcCCCChHHHHHHHHHHHHHhcCceeEEeeeeEEEEEeecccCCCCCccccCCCCcccCC
Q 004052 485 K-----QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTA 559 (776)
Q Consensus 485 ~-----~~a~v~~d~~~~~g~p~~~~pR~~L~~~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~ 559 (776)
+ ++++|+||++++||+|++.|||++|||++++++ +.|+++++|+|+|||||+. .|.++++||+..
T Consensus 82 ~~~~~~~~a~v~cd~~~~dG~p~~~~pR~~L~r~~~~~~-~~G~~~~~g~E~EF~l~~~---------~p~~~~~~y~~~ 151 (443)
T 4hpp_A 82 PDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYR-DSGLQVIAAFEHEFSLLGL---------PGERPAAAFSLQ 151 (443)
T ss_dssp SSTTSCCEEEEEEEEECTTSCBCTTCHHHHHHHHHHHHH-HTTEEEEEEEEEEEEEECC---------CSSSCCCTTCHH
T ss_pred cccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCeEEEEeeeEEEEecc---------ccCCCCccCCCC
Confidence 8 689999999999999999999999999999998 6899999999999999953 345667888888
Q ss_pred ccccchHHHHHHHHHHHhCCCCeeeeccCCCCCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCeeEecccccCCCC
Q 004052 560 AYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDI 639 (776)
Q Consensus 560 ~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpKP~~~~~ 639 (776)
+.+...+++++|+++|+++||+||++|+|+|||||||++.|++++++||+++++|++||+||++||+.|||||||+.+.+
T Consensus 152 ~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~ 231 (443)
T 4hpp_A 152 AQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAV 231 (443)
T ss_dssp HHHHTTTHHHHHHHHHHHTTCCEEEEEECSSTTEEEEEECCEETHHHHHHHHHHHHHHHHHHHHHTCEEECSSSSSTTCC
T ss_pred cccchHHHHHHHHHHHHHCCCCeEEeecCCCCCceEEEecCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeeccccC-CccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCCCcccCCCCCCcCCcccccccCCCC
Q 004052 640 GSGSHVHLSLWQN-GENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQCWGKENRE 718 (776)
Q Consensus 640 GsG~HvH~Sl~~~-g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~~~WG~~NR~ 718 (776)
|||||+|+|||++ |+|+|. |++++.+||+++++||||||+|++++++|++||+||||||+|++|||++++||.+||+
T Consensus 232 GsG~H~h~Sl~~~~G~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P~~NSYkRL~pg~~AP~~~~WG~~NRs 309 (443)
T 4hpp_A 232 TNGVHLHLSLQHADGSPLLY--EPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNRE 309 (443)
T ss_dssp CCCEEEEEEEEETTSCBSSB--CTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSGGGHHHHSCSTTCCCBCCEESSCTT
T ss_pred cccceeeeeeecCCCCcccc--CCCCccchhHHHHHHHHHHHHHHHHHHHHhCCCCcchhccCCCCcCCCcceeccCCCc
Confidence 9999999999974 699998 5666788999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCC---CCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhhhhc-CCCCCCcC
Q 004052 719 APLRTACPP---GVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIG 773 (776)
Q Consensus 719 a~iRi~~~~---~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~Gi~~-l~~p~p~~ 773 (776)
++||||... +.+..+++|||+|++|++|||||++||+|+|||+||++ ++||+|++
T Consensus 310 a~iRip~~~~~~~~~~~~~~riE~R~pd~~aNPYLa~AaiLaAGl~GI~~~l~p~~p~~ 368 (443)
T 4hpp_A 310 AALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALAD 368 (443)
T ss_dssp SSEEEECCCCSSSCCSSTTCEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCCCC----
T ss_pred eeEEeccccccCCCccccccEEEEcCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 999999742 21002468999999999999999999999999999999 99999975
No 3
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=100.00 E-value=7.8e-91 Score=785.03 Aligned_cols=356 Identities=26% Similarity=0.450 Sum_probs=318.4
Q ss_pred hhhccCCceEEEEEEecCCCCcceEEecchhhhHHHhhcccccccccc-ccccccCCCCCCCCCCCCCcEEEEeecCCce
Q 004052 401 SDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTRW 479 (776)
Q Consensus 401 ~~~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~ 479 (776)
..+++++|+||+++|+|++|++|+|.||+++|.+.+.++|++|+++++ ++. ..+.+|++|+||++|++
T Consensus 10 ~~~~~~~i~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgss~~g~~-----------~~~~sD~~l~PD~~T~~ 78 (473)
T 3ng0_A 10 KWIQDENIKIIDLKFIDTPGIWQHCSFYYDQLDENSFTEGIPFDGSSIRGWK-----------AINESDMCMVPDPNTAT 78 (473)
T ss_dssp HHHHHTTCCEEEEEEECSSSCEEEEEEEGGGCCGGGGTTCEEEETTSSTTSC-----------CGGGCEEEEEECGGGCE
T ss_pred HHHHhCCCCEEEEEEECCCCCEEEEEEeHHHHHHHHHhCCCccccccccccc-----------cCCCCcEEEEeecCccE
Confidence 345677999999999999999999999999998744578999988764 221 01357999999999999
Q ss_pred eccCCCC-ceEEEEEccCC-CCCcCCCChHHHHHHHHHHHHHhcCc--eeEEeeeeEEEEEeecccC-------------
Q 004052 480 RIPWQKQ-EEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLRE------------- 542 (776)
Q Consensus 480 ~~P~~~~-~a~v~~d~~~~-~g~p~~~~pR~~L~~~~~~~~~~~G~--~~~~g~E~EF~l~~~~~~~------------- 542 (776)
++||.++ +++|+||++++ +|+|++.|||++|||+++++++ .|+ ++++|+|+|||||++....
T Consensus 79 ~~Pw~~~~~a~v~cd~~~~~~g~p~~~~pR~iLkr~~~~~~~-~G~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~ 157 (473)
T 3ng0_A 79 IDPFCKEPTLSMICSIKEPRTGEWYNRDPRTIAAKAAEYLRG-TGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFADSV 157 (473)
T ss_dssp ECTTCSSCEEEEEEEEECTTTSSBCTTCHHHHHHHHHHHHHH-HTSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECT
T ss_pred ECCcCCCCcEEEEEEEeECCCCCCCCCChHHHHHHHHHHHHH-cCCCcceEEEeeeEEEEEeeccccccccccccccccc
Confidence 9999986 89999999998 9999999999999999999985 565 8999999999999852100
Q ss_pred ------------CCCCccccCCCCcccCCccccchHHHHHHHHHHHhCCCCeeeeccCCC-CCceEEecccchHHHhhhH
Q 004052 543 ------------GKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAG-KGQFEIALGHTVAAKAADN 609 (776)
Q Consensus 543 ------------~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~-pGQ~Ei~l~~~~~l~aaD~ 609 (776)
+..++.|.++++|+...+.+...+++++|+++|+++||+||++|+|+| ||||||++.|++++++||+
T Consensus 158 ~~~~~~~~~~~~~~~g~~~~~~~~y~~~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~~pGQ~Ei~~~~~~~l~aAD~ 237 (473)
T 3ng0_A 158 EGRWNTGREEEGGNLGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSADN 237 (473)
T ss_dssp TCGGGTTCCCTTCCCCCCCCTTCCSSCCTTTCCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHH
T ss_pred ccccccccccccCCCCcccCCCccccccCccchhHHHHHHHHHHHHHCCCCeEEeecCcCCCCceEEEccCCCHHHHHHH
Confidence 001234455677888778888999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCeeEecccccCCCCCccceeeeccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhh
Q 004052 610 LIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAF 689 (776)
Q Consensus 610 ~~~~r~~ik~vA~~~G~~aTFmpKP~~~~~GsG~HvH~Sl~~~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~ 689 (776)
++++|++||+||++||+.|||||||+.+.+|||||+|+|||++|+|+|. |++ ..+||+++++||||||+|+++++||
T Consensus 238 ~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GSG~H~H~Sl~~~g~n~F~--~~~-~~~lS~~~~~fiaGlL~h~~~l~a~ 314 (473)
T 3ng0_A 238 LMIYKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLWKDGQPLFA--GDK-YAGFSQMGLWYIGGILKHAPALLAF 314 (473)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTB--SSS-GGGBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEcCcccCCCCCCeeEEEEeeccCCccccC--CCC-ccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 433 6789999999999999999999999
Q ss_pred hCCCCCcccCCCCCCcCCcccccccCCCCCcccccCCCCCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhhhhc-CCC
Q 004052 690 TAPVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCL 768 (776)
Q Consensus 690 ~~Pt~nSY~Rl~~~~~ap~~~~WG~~NR~a~iRi~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~Gi~~-l~~ 768 (776)
++||+||||||+|++|||++++||.+||+++||||...+ +.+++|||+|+||++|||||++||+|+|||+||++ ++|
T Consensus 315 ~~Pt~NSYkRL~pg~~AP~~~~Wg~~NRsa~iRip~~~~--~~~~~RiE~R~pd~~aNPYLa~Aa~LaAGldGI~~~l~p 392 (473)
T 3ng0_A 315 TNPTTNSYKRLVPGFEAPVNLAYSQGNRSASVRIPLSGG--NPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNQIDP 392 (473)
T ss_dssp HSCSTTHHHHBBTTTBCCCBCCEEESCTTSSEEECCCSS--CGGGCCEEECSCCTTSCHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hCCCcchhhcccCCCcCccceeeeccCCcCceeeeccCC--CCCcceEEeecCCCCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999986311 24568999999999999999999999999999999 999
Q ss_pred CCCcC
Q 004052 769 PEPIG 773 (776)
Q Consensus 769 p~p~~ 773 (776)
|+|++
T Consensus 393 ~~p~~ 397 (473)
T 3ng0_A 393 GEPLD 397 (473)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99975
No 4
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=100.00 E-value=5.8e-88 Score=766.44 Aligned_cols=359 Identities=27% Similarity=0.426 Sum_probs=319.0
Q ss_pred hhhhccCCceEEEEEEecCCCCcceEEecchhhhHHHhhcccccccccc-ccccccCCCCCCCCCCCCCcEEEEeecCCc
Q 004052 400 KSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTR 478 (776)
Q Consensus 400 ~~~~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~ 478 (776)
..++++++|+||+++|+|++|++|+|.||+++|.+.+.++|++|+++++ ++.. ...+|++|+||++|+
T Consensus 18 ~~~i~~~~I~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgssi~G~~~-----------~~~sD~~l~PD~~T~ 86 (486)
T 4acf_A 18 FKLAKDEKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDDGLAFDGSSIRGFQS-----------IHESDMLLLPDPETA 86 (486)
T ss_dssp HHHHHHTTCCEEEEEEECSSSCEEEEEEEGGGCSHHHHHTCEEEEGGGSTTSCC-----------GGGCEEEEEECGGGC
T ss_pred HHHHHHCCCcEEEEEEECCCCcEEEEEEEHHHHHHHHHHCCCeeeccccccccc-----------CCCCCEEEEEcccee
Confidence 3456778999999999999999999999999998766678999988764 2211 124799999999999
Q ss_pred eeccCCCCc-eEEEEEccCC-CCCcCCCChHHHHHHHHHHHHHh-cCceeEEeeeeEEEEEeecccC-------------
Q 004052 479 WRIPWQKQE-EMIMADMHLK-PGEPWEYCPREALRKVSRLLKEE-FNLVLNAGFEIEFYLLKSVLRE------------- 542 (776)
Q Consensus 479 ~~~P~~~~~-a~v~~d~~~~-~g~p~~~~pR~~L~~~~~~~~~~-~G~~~~~g~E~EF~l~~~~~~~------------- 542 (776)
+++||.++. +.|.|++++. +|+|++.|||++|||++++++++ +|+++++|+|+|||||+++..+
T Consensus 87 ~~~Pw~~~~~~~v~~~~~d~~~g~P~~~~pR~iLk~~~~~~~~~g~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~ 166 (486)
T 4acf_A 87 RIDPFRAAKTLNINFFVHDPFTLEPYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAI 166 (486)
T ss_dssp EECSSCSSCEEEEEEEEECTTTCCBCTTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECT
T ss_pred EECCcCCCccEEEEEEEeeCCCCCCCCCCchHHHHHHHHHHHHcCCcceecccceeEEEEeccccccccccCCcccCCcc
Confidence 999999875 5688898874 89999999999999999999864 5668999999999999753110
Q ss_pred -------------CC--CCccccCCCCcccCCccccchHHHHHHHHHHHhCCCCeeeeccCCCC-CceEEecccchHHHh
Q 004052 543 -------------GK--EEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGK-GQFEIALGHTVAAKA 606 (776)
Q Consensus 543 -------------~~--~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~p-GQ~Ei~l~~~~~l~a 606 (776)
+. .++.+.+...||...+.+...++++++++.|+++||+|+++|+|+|| |||||++.|+++|++
T Consensus 167 ~g~~~~~~~~~~~g~p~~~~~~~~~~~y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gp~GQ~Ei~~~~~~~l~a 246 (486)
T 4acf_A 167 SGWWNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHA 246 (486)
T ss_dssp TBGGGTTCSBCTTSCBCCCCCBCTTCCSSBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHH
T ss_pred ccccCCCCcccCCCCCCCCcccccCCccccCCcchhHHHHHHHHHHHHHhCCceEEeeeeeeeccceeEEeccCcchhhh
Confidence 00 11233345567888888889999999999999999999999999998 999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHcCCeeEecccccCCCCCccceeeeccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 004052 607 ADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSI 686 (776)
Q Consensus 607 aD~~~~~r~~ik~vA~~~G~~aTFmpKP~~~~~GsG~HvH~Sl~~~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al 686 (776)
||+++++|++||+||++||+.|||||||+.+.+|||||+|+|||++|+|+|+ |+++..+||+++++||||||+|++++
T Consensus 247 AD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l 324 (486)
T 4acf_A 247 ADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWKDGAPLMY--DETGYAGLSDTARHYIGGLLHHAPSL 324 (486)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEESSB--CTTSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEeeccccCCCcccceeeeeeccCCCcccc--ccccccccchHHHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999999999 66778899999999999999999999
Q ss_pred HhhhCCCCCcccCCCCCCcCCcccccccCCCCCcccccCCCCCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhhhhc-
Q 004052 687 LAFTAPVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR- 765 (776)
Q Consensus 687 ~a~~~Pt~nSY~Rl~~~~~ap~~~~WG~~NR~a~iRi~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~Gi~~- 765 (776)
++|++||+||||||+|++|||++++||.+||+++||||...+ +.+++|||+|+||++|||||++||+|+|||+||++
T Consensus 325 ~a~~~PtvNSYkRl~pg~~AP~~~~wg~~NRsa~iRip~~~~--~~~~~riE~R~pd~~aNPYLalAailaAGldGI~~~ 402 (486)
T 4acf_A 325 LAFTNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIPITGS--NPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNK 402 (486)
T ss_dssp HHHHSCSTTHHHHSSTTSSSCSBSCEEETCTTSSEEECCCTT--CTTTCCEEECCCCSSSCHHHHHHHHHHHHHHHHHTT
T ss_pred eeeecCCCcchhccCCCCcCCceeEEeccCCCcceEecccCC--CCccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999996322 24568999999999999999999999999999999
Q ss_pred CCCCCCcC
Q 004052 766 LCLPEPIG 773 (776)
Q Consensus 766 l~~p~p~~ 773 (776)
++||+|++
T Consensus 403 l~p~~p~~ 410 (486)
T 4acf_A 403 IEPQAPVD 410 (486)
T ss_dssp CCCCCCCC
T ss_pred CCCCCccC
Confidence 99999985
No 5
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=7.9e-87 Score=753.07 Aligned_cols=354 Identities=26% Similarity=0.391 Sum_probs=316.7
Q ss_pred hhccCCceEEEEEEecCCCCcceEEecchhhhHHHhhcccccccccc-ccccccCCCCCCCCCCCCCcEEEEeecCCcee
Q 004052 402 DAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTRWR 480 (776)
Q Consensus 402 ~~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~ 480 (776)
.+++.+|+||+++|+|+.|++|+|.||+++|.+.+.+.|++|+++++ ++. ..+.+|++|+||++|+++
T Consensus 8 ~~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~fdgss~~g~~-----------~~~~sD~~l~PD~~T~~~ 76 (468)
T 1f52_A 8 MLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWK-----------GINESDMVLMPDASTAVI 76 (468)
T ss_dssp HHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSC-----------CSSCCEEEEEECGGGCEE
T ss_pred HHHhCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHhhCceeeccccccccc-----------cCCCCCEEEEEecCCcEE
Confidence 34566999999999999999999999999999844467899987654 321 123679999999999999
Q ss_pred ccCCC-CceEEEEEccCC-CCCcCCCChHHHHHHHHHHHHHhcCc--eeEEeeeeEEEEEeecc----c----------C
Q 004052 481 IPWQK-QEEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVL----R----------E 542 (776)
Q Consensus 481 ~P~~~-~~a~v~~d~~~~-~g~p~~~~pR~~L~~~~~~~~~~~G~--~~~~g~E~EF~l~~~~~----~----------~ 542 (776)
+||.+ ++++|+||++++ +|+|++.|||++|||++++++ ++|+ ++++|+|+|||||++.. . +
T Consensus 77 ~Pw~~~~~~~v~~d~~~~~~G~p~~~~pR~ilk~~~~~l~-~~G~~~~~~~G~E~EFfl~~~~~~~~~~~~~~~~~~~~~ 155 (468)
T 1f52_A 77 DPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLR-ATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIE 155 (468)
T ss_dssp CSSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHH-HHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTT
T ss_pred ccccCCCceEEEEEEEeCCCCCcCCCCHHHHHHHHHHHHH-HcCCCcceEEEeeeEEEEEeccccccCCccccccccccc
Confidence 99987 489999999999 799999999999999999998 5799 89999999999998631 0 0
Q ss_pred C-----------CCCccccCCCCcccCCccccchHHHHHHHHHHHhCCCCeeeeccCCCCC-ceEEecccchHHHhhhHH
Q 004052 543 G-----------KEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKG-QFEIALGHTVAAKAADNL 610 (776)
Q Consensus 543 ~-----------~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pG-Q~Ei~l~~~~~l~aaD~~ 610 (776)
+ ..+..|..+++||+..+.+...+++++|++.|+++||+||+.|+|+||| ||||++.|++++++||++
T Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~Y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~apggQ~Ei~~~~~~~l~aAD~~ 235 (468)
T 1f52_A 156 GAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEI 235 (468)
T ss_dssp CGGGGGCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHH
T ss_pred cccCCCccccccCCCCCCCCCCCccCCCccccHHHHHHHHHHHHHHCCCCeEEeecCCCCceeEEEeccCCCHHHHHHHH
Confidence 0 0123455667888888888999999999999999999999999999996 999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeeEecccccCCCCCccceeeeccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhh
Q 004052 611 IFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFT 690 (776)
Q Consensus 611 ~~~r~~ik~vA~~~G~~aTFmpKP~~~~~GsG~HvH~Sl~~~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~~ 690 (776)
+++|++||+||++||+.|||||||+.+.+|||||+|+|||++|+|+|. ++ +..+||+++++||||||+|+++|++|+
T Consensus 236 ~~~k~~vk~vA~~hGl~atFmpKP~~g~~GSG~H~h~Sl~~~g~Nlf~--~~-~~~~ls~~~~~~iaGll~h~~~l~a~~ 312 (468)
T 1f52_A 236 QIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFS--GD-KYAGLSEQALYYIGGVIKHAKAINALA 312 (468)
T ss_dssp HHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTB--CS-SGGGBCHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEeCCCCCCCCCCCcceeeccccCCCcccC--CC-CcchHHHHHHHHHHHHHHHHHHhHhHh
Confidence 999999999999999999999999999999999999999999999997 43 456899999999999999999999999
Q ss_pred CCCCCcccCCCCCCcCCcccccccCCCCCcccccCCCCCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhhhhc-CCCC
Q 004052 691 APVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLP 769 (776)
Q Consensus 691 ~Pt~nSY~Rl~~~~~ap~~~~WG~~NR~a~iRi~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~Gi~~-l~~p 769 (776)
+||+||||||+|++|||++++||.+||+++||||.. + ....+|||+|++|++|||||++||+|+|||+||++ ++||
T Consensus 313 ap~~NSYkRL~pg~eAP~~i~wg~~NRsa~iRiP~~-~--~~~~~riE~R~pd~~aNPYLalaailaagL~GI~~~l~p~ 389 (468)
T 1f52_A 313 NPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVV-A--SPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPG 389 (468)
T ss_dssp SCSGGGGGTSSSCSSCCCEEEEESSCTTEEEECCCC-S--CGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCccchhccCCCCcCcCcceeccCCcccceeeCCC-C--CCCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999852 1 12457999999999999999999999999999999 9999
Q ss_pred CCcC
Q 004052 770 EPIG 773 (776)
Q Consensus 770 ~p~~ 773 (776)
+|++
T Consensus 390 ~~~~ 393 (468)
T 1f52_A 390 EPMD 393 (468)
T ss_dssp SCCC
T ss_pred CCcC
Confidence 8864
No 6
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=1.4e-79 Score=683.97 Aligned_cols=336 Identities=24% Similarity=0.258 Sum_probs=291.4
Q ss_pred hhccCCceEEEEEEecCCCCcceEEecchhhhHHHhhccccccccccccccccCCCCCCCCCCC-CCcEEEEeecCCcee
Q 004052 402 DAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSG-TGEIRLMPDLSTRWR 480 (776)
Q Consensus 402 ~~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~-~~d~~l~PD~~T~~~ 480 (776)
.+++.+|++|+++|+|++|++|+|+||+++|.+ + ..|++|++++ . ..+. ...+ .+|++|+||++|+++
T Consensus 8 ~l~~~~i~~v~~~~~D~~G~~r~k~ip~~~~~~-~-~~g~~~~gs~-~----~~~~----~~~~~~sD~~l~PD~~T~~~ 76 (421)
T 2j9i_A 8 MLNEHAAAFVRFEATDAAGASRSKSIPAQFFEK-V-IHARGYLEDG-E----VNAG----AAGAAASDIVLMPELSTAAV 76 (421)
T ss_dssp HHHHTTCSEEEEEEECSSSCEEEEEEEGGGCCT-T-HHHHCEEECG-G----GSTT----TCCTTCCCEEEEECSSCCEE
T ss_pred HHHhCCCCEEEEEEECCCCCEEEEEEEHHHHHH-h-hcCCeeeccc-C----cccc----cccCCCCCEEEEEecCceEE
Confidence 345669999999999999999999999999943 3 3477776632 0 0111 0022 379999999999999
Q ss_pred ccC-CCCceEEEEEccCCCCCcCCCChHHHHHHHHHHHHHhcCc--eeEEeeeeEEEEEeecccCCCCCccccCCCCccc
Q 004052 481 IPW-QKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCS 557 (776)
Q Consensus 481 ~P~-~~~~a~v~~d~~~~~g~p~~~~pR~~L~~~~~~~~~~~G~--~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~ 557 (776)
+|| .+++++|+|| ||+|++.|||++|||++++++ ++|+ ++++|+|+|||||++... +. ....||.
T Consensus 77 ~Pw~~~~~a~v~cd----dG~P~~~~pR~iLk~~~~~~~-~~G~~d~~~~g~E~EF~l~~~~~~-----~~--~~p~y~~ 144 (421)
T 2j9i_A 77 AAAAAAATAAVICD----GGAAAAASPRYIARAALAQLQ-AAGAAAGLLSAFIADFCIFGVPEV-----IN--SKTISFP 144 (421)
T ss_dssp CTTSSSSEEEEEEE----EESSCSCCHHHHHHHHHHHHH-HTTSCSEECCEECCCCEEESCCEE-----EE--CSSCEEE
T ss_pred cCcCCCCeEEEEcC----CCCCCCCChHHHHHHHHHHHH-hcCCccCceEEeeeEEEEEecCCC-----CC--CCCCcCC
Confidence 999 7889999999 799999999999999999998 5899 999999999999986311 00 1123565
Q ss_pred CCccccchHHHHHHHHHHHhCCCCeeeeccCCCCCceEEecccch-HHHhhhHHHHHHHHHHHHHHHcCCeeEecccccC
Q 004052 558 TAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLATFVPKFAL 636 (776)
Q Consensus 558 ~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~-~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpKP~~ 636 (776)
....+...+++++|+++|+ +||+|++.|+|+|||||||++.|++ ++++||+++++|++||+||++||+.|||||||
T Consensus 145 ~~~~~~~~~~~~~i~~~l~-~Gi~ve~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~atFmpKP-- 221 (421)
T 2j9i_A 145 ASTTAAAADQPQEAAAGGA-AGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASAAAAA-- 221 (421)
T ss_dssp ECCCTTCTTGGGSCCTTCC-CSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEECCTTS--
T ss_pred CCcccchhHHHHHHHHHHh-CCCCeEEeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEcCCc--
Confidence 5556678889999999999 9999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCCccceeeecccc---CCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCCCcccCCCCCCcCCccc---
Q 004052 637 DDIGSGSHVHLSLWQ---NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQ--- 710 (776)
Q Consensus 637 ~~~GsG~HvH~Sl~~---~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~~--- 710 (776)
+.+|||| +|+|||+ +|+|+|. +++++ +||+++++||||||+|++++++|++||+||||| +.|||.++
T Consensus 222 ~~~GSG~-~h~Sl~~~~~~G~nlf~--~~~~~-~ls~~~~~~iaGil~h~~~l~a~~~p~~NSYk~---~~~ap~~~~~~ 294 (421)
T 2j9i_A 222 AAAAAGA-GSHSIWDVGAAGTNAFA--GASGA-RATLTGAKWLAGLLAAAAAAAAAAAAAAAAAAA---AAAGAAAAAAT 294 (421)
T ss_dssp STTSCCC-BCCEEECEEETTEESSC--SSSGG-GCCHHHHHHHHHHHHHHHHHHHHHTCSHHHHHH---TSSSTTCCCEE
T ss_pred CCCCCce-EEEeccccCCCCceeec--CCCCc-cccHHHHHHHHHHHHHHHHHHHHhCCCccccCC---CCCCCcCeeee
Confidence 8899999 9999997 6899998 44444 899999999999999999999999999999994 57888777
Q ss_pred ccccCCCCCcccccCCCCCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhhhhc-CCCCCCcC
Q 004052 711 CWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIG 773 (776)
Q Consensus 711 ~WG~~NR~a~iRi~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~Gi~~-l~~p~p~~ 773 (776)
+||.+||+++||||.. ...+.+|||+|+||++|||||++||+|+|||+||++ ++||+|++
T Consensus 295 ~wG~~NRsa~iRip~~---~~~~~~riE~R~pd~~aNPYLa~aailaagl~GI~~~l~~p~~~~ 355 (421)
T 2j9i_A 295 AWGAAAAACALNIAAA---AAAKGAQIENKAGAAAANPYLVLAATVAAGLDGIQSAGAAAGAAA 355 (421)
T ss_dssp EEESSCTTEEEEEECC---SSGGGCEEEECSCBTTSCHHHHHHHHHHHHHHHHHHTCCCCSCBC
T ss_pred eeecCCCccceeeccc---CCCCCCEEEEcCCCCCCChHHHHHHHHHHHhhhhhhccCCCCCCC
Confidence 9999999999999863 113458999999999999999999999999999999 99888875
No 7
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-78 Score=664.66 Aligned_cols=330 Identities=17% Similarity=0.210 Sum_probs=272.1
Q ss_pred ccCCceEEEEEEecCCCCcceEEecchhhhHHHhh-ccccccccccccccccCCCCCCCCCCCCCcEEEEeecCCceecc
Q 004052 404 FESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTK-YGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIP 482 (776)
Q Consensus 404 ~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~P 482 (776)
++.+|++|++.|+|++|++|+|++|+++|.+.+.+ .+++|+++++++.. .+.+|++|+|| |++++|
T Consensus 19 ~~~~i~~v~~~~~D~~G~lR~K~~~~~~~~~~~~~~~~~~fDGss~g~~~-----------~~~sD~~l~Pd--t~~~~P 85 (370)
T 3fky_A 19 DQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAP-----------GHDSDIYLKPV--AYYPDP 85 (370)
T ss_dssp --CCCEEEEEEEECSSSCEEEEEEEESSCCCSGGGSCCEEECGGGTTSSC-----------CCC--EEEEEE--EEEECT
T ss_pred ccCCeEEEEEEEEcCCCCeEEEEEECccccchHHhCCccccCCccccccc-----------CCCCCeeEeee--EEEEcC
Confidence 46789999999999999999999999988765532 36778777664321 24689999999 899999
Q ss_pred CCCC-ceEEEEEccCCCCCcCCCChHHHHHHHHHHHHHhcCceeEEeeeeEEEEEeeccc-CCC-CCccccCCCCcccCC
Q 004052 483 WQKQ-EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLR-EGK-EEWVPIDFTPYCSTA 559 (776)
Q Consensus 483 ~~~~-~a~v~~d~~~~~g~p~~~~pR~~L~~~~~~~~~~~G~~~~~g~E~EF~l~~~~~~-~~~-~~~~p~~~~~~~~~~ 559 (776)
|.++ +++|+||++++||+|++.|||++|||++++++ |+++++|+|+|||||+.... .+. .+..|.++++||+..
T Consensus 86 w~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~p~~~~p~~~g~yy~~~ 162 (370)
T 3fky_A 86 FRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK---DEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGV 162 (370)
T ss_dssp TTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEECTTSSBTTCCTTSBCSCSSSCTTCC
T ss_pred CCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhc---CCCceEEeeeEEEEEccCCCcccCCCCCccCCCCcccccc
Confidence 9986 79999999999999999999999999999874 89999999999999987311 111 112566778887655
Q ss_pred cccc--chHHHHHHHHHHHhCCCCeeeeccCCCCCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCeeEecccccC-
Q 004052 560 AYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFAL- 636 (776)
Q Consensus 560 ~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpKP~~- 636 (776)
+... .++++++++++|+++||+||++|+|+|||||||++.|++++++||+++++|++||+||++||+.|||||||+.
T Consensus 163 ~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~~vk~vA~~~G~~ATFmpKP~~g 242 (370)
T 3fky_A 163 GAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKG 242 (370)
T ss_dssp STTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHTTTCEEECCSCSSSS
T ss_pred chhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCcEEEEcccccCC
Confidence 4333 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccceeeeccccCCccccccCCCCCCCCCcHHHHHHHHHHH-HHHHHhHhhhCCCCCcccCCCCCCcCCcc--cccc
Q 004052 637 DDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVL-HHLSSILAFTAPVPNSYDRIQPNTWSGAY--QCWG 713 (776)
Q Consensus 637 ~~~GsG~HvH~Sl~~~g~n~f~~~d~~~~~~ls~~~~~fiaGil-~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~--~~WG 713 (776)
+.+|||||+|+|||+... +.+++ ..++||+||+ +|+++|++|+ +||||||+|++|||++ +|||
T Consensus 243 d~~GSG~H~H~Sl~~~~~----------~~g~~-~~~~~i~gl~~~h~~~i~a~~---~nSYkRL~~~~eap~~~~~sWG 308 (370)
T 3fky_A 243 DWNGAGCHANVSTKEMRQ----------PGGTK-YIEQAIEKLSKRHAEHIKLYG---SDNDMRLTGRHETASMTAFSSG 308 (370)
T ss_dssp SSCCCBEEEEEECHHHHS----------SSTHH-HHHHHHHHHHHTHHHHHHSSC---TTGGGC--------CCSCCCEE
T ss_pred CCCcccceeeeccccccC----------CCCHH-HHHHHHHHHHHHhHHHHHHHc---cchhhhcCCCccCCCcccceEe
Confidence 479999999999996211 11333 3589999999 9999999996 7999999999999974 8999
Q ss_pred cCCCCCcccccCCCCCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhhhhc
Q 004052 714 KENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR 765 (776)
Q Consensus 714 ~~NR~a~iRi~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~Gi~~ 765 (776)
.+||+++||||...+ ...++|||+|+||++|||||++||||+||++||++
T Consensus 309 ~~NRsa~iRIp~~~~--~~~~~riE~R~pda~aNPYLa~Aailaagl~Gi~~ 358 (370)
T 3fky_A 309 VANRGSSIRIPRSVA--KEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 (370)
T ss_dssp ESCTTSSEEECHHHH--HHTCCCEEECCCBTTCCHHHHHHHHHHHHHCCBTT
T ss_pred cCCCceeEEecCCCC--CCCCCEEEECCCCCCCCHHHHHHHHHHHHhcCccc
Confidence 999999999996321 11235999999999999999999999999999986
No 8
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=100.00 E-value=5.4e-77 Score=654.95 Aligned_cols=331 Identities=19% Similarity=0.226 Sum_probs=275.4
Q ss_pred hhhhhhccC-CceEEEEEEecCCC-CcceEEecchhhhHHHhhc--cccccccccccccccCCCCCCCCCCCCCcEEEEe
Q 004052 398 LKKSDAFES-DVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMP 473 (776)
Q Consensus 398 ~~~~~~~~~-~i~~v~~~~~D~~G-~~r~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~P 473 (776)
+..+|..++ ++.+|+++|+|++| ++|+|.+|+++|.+.+ +. |++|+++++++. ..+.+|++|+|
T Consensus 33 l~~~l~~~~~~~~~v~~~~~D~~G~~~R~K~ip~~~~~~~~-~~~p~~~~dgss~~~~-----------~~~~sD~~l~P 100 (384)
T 2ojw_A 33 KQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCV-EELPEWNFDGSSTLQS-----------EGSNSDMYLVP 100 (384)
T ss_dssp HHHHHTSCCCSCEEEEEEEECTTSSCEEEEEEEESSCCSSG-GGSCCEEEEGGGTTSS-----------BTTBCEEEEEE
T ss_pred HHHHHhCCCCCcEEEEEEEECCCCCeeeEEEEEHHHhhhhH-hhCccccccCcccccc-----------cCCCCcEEEEe
Confidence 555666554 59999999999999 9999999999998754 34 667776554321 13468999999
Q ss_pred ecCCceeccCCC-CceEEEEEccCCCCCcCCCChHHHHHHHHHHHHHhcCceeEEeeeeEEEEEeecccC-CCC-Ccccc
Q 004052 474 DLSTRWRIPWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE-GKE-EWVPI 550 (776)
Q Consensus 474 D~~T~~~~P~~~-~~a~v~~d~~~~~g~p~~~~pR~~L~~~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~-~~~-~~~p~ 550 (776)
| |++++||.+ ++++|+||++++||+|++.|||++|||++++++ |+++++|+|+|||||++.... +.. ...|.
T Consensus 101 D--t~~~~Pw~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~~~~g~p~ 175 (384)
T 2ojw_A 101 A--AMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVS---NQHPWFGMEQEYTLMGTDGHPFGWPSNGFPG 175 (384)
T ss_dssp E--EEEECTTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEEC-CCSBTTCCTTSCCS
T ss_pred e--EEEECCCCCCCeEEEEEEEECCCCCCCCcCHHHHHHHHHHHHh---CCEEEEEeeeEEEEEccCCCcccccCCCccC
Confidence 9 899999986 589999999999999999999999999999985 799999999999999873211 111 11355
Q ss_pred CCCCcccCCccc--cchHHHHHHHHHHHhCCCCeeeeccCCCCCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCee
Q 004052 551 DFTPYCSTAAYD--AVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLA 628 (776)
Q Consensus 551 ~~~~~~~~~~~~--~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~a 628 (776)
++++|++....+ ..++++++++++|+++||+||++|+|+|||||||++.|++++++||+++++|++||+||++||+.|
T Consensus 176 ~~g~y~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~Gl~a 255 (384)
T 2ojw_A 176 PQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIA 255 (384)
T ss_dssp CSSSCTTCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCCCCcccccchHHHHHHHHHHHHHHHHCCCCeEeeecCCCCcceEEEcCCCcHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 677788766555 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccCC-CCCccceeeecccc----CCccccccCCCCCCCCCcHHHHHHHHHH-HHHHHHhHhh-hCCCCCcccCCC
Q 004052 629 TFVPKFALD-DIGSGSHVHLSLWQ----NGENVFMASDSSSKHGMSSVGEKFMAGV-LHHLSSILAF-TAPVPNSYDRIQ 701 (776)
Q Consensus 629 TFmpKP~~~-~~GsG~HvH~Sl~~----~g~n~f~~~d~~~~~~ls~~~~~fiaGi-l~h~~al~a~-~~Pt~nSY~Rl~ 701 (776)
||||||+.+ .+|||||+|+||++ +|.| ..+++++|+ ++|+++++++ .+|++||||||+
T Consensus 256 TFmpKP~~~d~~GSG~H~H~Sl~~~~~~~g~n---------------~f~~~~~gl~~~h~~~i~a~~p~~~~nsykRL~ 320 (384)
T 2ojw_A 256 TFDPKPIPGNWNGAGCHTNFSTKAMREENGLK---------------YIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLT 320 (384)
T ss_dssp ECCSCSSCSSSCCCBEEEEEECHHHHSTTTHH---------------HHHHHHHHHHTCHHHHHHHSSTTTTTTGGGTCC
T ss_pred EEeccccCCCCCCCeeeEEeehhhhcCCCchh---------------HHHHHHHHHHHHHHHHheEeccCCCCCchhhcc
Confidence 999999977 69999999999974 2333 346789999 8999999999 334599999999
Q ss_pred CCCcCCc--ccccccCCCCCcccccCCCCCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhh
Q 004052 702 PNTWSGA--YQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDG 762 (776)
Q Consensus 702 ~~~~ap~--~~~WG~~NR~a~iRi~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~G 762 (776)
|++|||+ ++|||.+||+++||||...+. .+++|||+|+||++|||||++||+|+||+.+
T Consensus 321 pg~ea~~~~~~sWG~~NRsa~iRIp~~~~~--~~~~riE~R~pd~~aNPYLa~Aailaagl~~ 381 (384)
T 2ojw_A 321 GFHETSNINDFSAGVANRSASIRIPRTVGQ--EKKGYFEDRRPSANCDPFSVTEALIRTCLLN 381 (384)
T ss_dssp -----CCTTCCCEEETCTTSSEEECHHHHH--HTCSCEEECCCBTTCCHHHHHHHHHHHHTSC
T ss_pred CCcccCCCceEEeecccCCceEEeecCCCC--CCCCEEEEcCCCCCCCHHHHHHHHHHHhcCC
Confidence 9999986 899999999999999852111 1246999999999999999999999999865
No 9
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00 E-value=3.6e-75 Score=635.06 Aligned_cols=325 Identities=20% Similarity=0.245 Sum_probs=276.4
Q ss_pred ccCCceEEEEEEecCCC-CcceEEecchhhhHHHhh-ccccccccccccccccCCCCCCCCCCCCCcEEEEeecCCceec
Q 004052 404 FESDVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTK-YGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (776)
Q Consensus 404 ~~~~i~~v~~~~~D~~G-~~r~k~vp~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~ 481 (776)
...++.+|+++|+|+.| .+|+|.+|++.+.+.+.+ .|++|+++++++.. ...+|++|+|| |++++
T Consensus 14 ~~~~~~~v~~~~vD~~g~~~r~k~~~~~~~~~~~~~~~g~~fdgss~~~~~-----------~~~sD~~l~PD--t~~~~ 80 (356)
T 2d3a_A 14 DTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAP-----------GEDSEVILYPQ--AIFKD 80 (356)
T ss_dssp GTCSCEEEEEEEECTTSSCEEEEEEEESSCCCCGGGSCCEEEEGGGTTSSC-----------SSSCEEEEEEE--EEEEC
T ss_pred CCCCeEEEEEEEEcCCCCcccceEEECCcchhhHhhcCcceeccccccccc-----------CcCCcEEEEEE--EEEEC
Confidence 35678999999999999 999999999988775432 28888887765321 23579999999 89999
Q ss_pred cCCC-CceEEEEEccCCCCCcCCCChHHHHHHHHHHHHHhcCceeEEeeeeEEEEEeecccCCCCCc----cccCCCCcc
Q 004052 482 PWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEW----VPIDFTPYC 556 (776)
Q Consensus 482 P~~~-~~a~v~~d~~~~~g~p~~~~pR~~L~~~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~----~p~~~~~~~ 556 (776)
||.+ ++++|+||++++||+|++.|||++|||++++++ +.|+++++|+|+|||||++.. +....| .|..+++||
T Consensus 81 P~~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~-~~g~~~~~G~E~EF~lf~~~~-~~~~~~~~~g~p~~~g~y~ 158 (356)
T 2d3a_A 81 PFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPE-VAAEEPWYGIEQEYTLLQKDT-NWPLGWPIGGFPGPQGPYY 158 (356)
T ss_dssp TTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHSHH-HHHHCCEEEEEEEEEEEETTT-CCBTTSCTTSBCSCSSSCT
T ss_pred CcCCCCceEEEEEEECCCCCCCCCCHHHHHHHHHHHHH-hcCCeeEEecceEEEEEecCC-CcccccccCCCCCCCCCcC
Confidence 9986 589999999999999999999999999999998 479999999999999998632 111111 355667888
Q ss_pred cCCcccc--chHHHHHHHHHHHhCCCCeeeeccCCCCCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCeeEecccc
Q 004052 557 STAAYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKF 634 (776)
Q Consensus 557 ~~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpKP 634 (776)
+..+.+. .++++++++++|+++||+||++|+|+|||||||++.|++++++||+++++|++||+||++||+.|||||||
T Consensus 159 ~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP 238 (356)
T 2d3a_A 159 CGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKP 238 (356)
T ss_dssp TCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSCS
T ss_pred cCcccchHHHHHHHHHHHHHHHHCCCCEEEeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEECCCc
Confidence 7766654 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCCccceeeecccc----CCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCCCcccCCCCCCcCCc-
Q 004052 635 AL-DDIGSGSHVHLSLWQ----NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGA- 708 (776)
Q Consensus 635 ~~-~~~GsG~HvH~Sl~~----~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~nSY~Rl~~~~~ap~- 708 (776)
+. +.+|||||+|+|||+ +|.|+|. . ..-+.+++|++++++| ++||||||+|++|||.
T Consensus 239 ~~~d~~GSG~H~H~Sl~~~~~~~g~~~f~-----------~---~~~~l~l~h~~~l~a~---~~nSYkRL~pg~eap~~ 301 (356)
T 2d3a_A 239 IPGDWNGAGAHTNYSTESMRKEGGYEVIK-----------A---AIEKLKLRHKEHIAAY---GEGNERRLTGRHETADI 301 (356)
T ss_dssp SCSSSCCCBEEEEEECTTTSSTTHHHHHH-----------H---HHHHHHHTHHHHHTTS---CTTHHHHCSSSSSCCCT
T ss_pred cCCCCCCCcceEEechhhhccCCCHHHHH-----------H---HHHHHHHHHHHHHHhH---ccChHHHccCCccCCCc
Confidence 96 679999999999963 2456664 1 1113479999999999 3599999999999986
Q ss_pred -ccccccCCCCCcccccCCCCCCCCCccEEEEcCCCCCCcHHHHHHHHHHHHHhh
Q 004052 709 -YQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDG 762 (776)
Q Consensus 709 -~~~WG~~NR~a~iRi~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAGl~G 762 (776)
+++||.+||+++||||.... ..+++|||+|+||++|||||++||+|+||+.+
T Consensus 302 ~~~swG~~NRsa~iRIp~~~~--~~~~~riE~R~pd~~aNPYLa~Aailaagl~~ 354 (356)
T 2d3a_A 302 NTFSWGVANRGASVRVGRETE--QNGKGYFEDRRPASNMDPYVVTSMIAETTIVW 354 (356)
T ss_dssp TCCCEESSCTTSSEECCHHHH--HTTCCCEEECCCBTTCCHHHHHHHHHHHHTTC
T ss_pred ceeEEeccCCeeeEEEccCCC--CCCCCEEEEcCCCCCCCHHHHHHHHHHHhcCC
Confidence 89999999999999985211 12246999999999999999999999999854
No 10
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=100.00 E-value=6.8e-60 Score=538.19 Aligned_cols=284 Identities=21% Similarity=0.255 Sum_probs=234.3
Q ss_pred CcEEEEeecCC-ceeccCCCCceEEEEEccCCCCC------cCCCChHHHHHHHHHHHHHhcCc-----eeEEeeeeEEE
Q 004052 467 GEIRLMPDLST-RWRIPWQKQEEMIMADMHLKPGE------PWEYCPREALRKVSRLLKEEFNL-----VLNAGFEIEFY 534 (776)
Q Consensus 467 ~d~~l~PD~~T-~~~~P~~~~~a~v~~d~~~~~g~------p~~~~pR~~L~~~~~~~~~~~G~-----~~~~g~E~EF~ 534 (776)
.+.++.||++| .++.| ++-.+.|.+++.+|+ |+..|||+++|++++.++ .+|. ++.+|+|+|||
T Consensus 144 arg~~~~D~ts~afi~~---~TL~IP~~f~s~~Ge~ld~ktPL~rsPR~ilk~A~~~Lk-~~G~d~~~v~~~~G~E~EFF 219 (729)
T 3o6x_A 144 ARGYTAWDGSSPAFVVD---TTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQ-LFDKNITRVFTNLGWEQEYF 219 (729)
T ss_dssp ----CCBCSSSCCEEET---TEEECCBCCC----CCCBSHHHHHHHHHHHHHHHHHHHH-TSSSCCCCEEEEEEEEECEE
T ss_pred ccCceecCCCCCeEEeC---CeEEEEEEEEeCCCCcCCCCCchhhCHHHHHHHHHHHHH-HcCCCCccceEEEEeccEEE
Confidence 58899999999 66765 567777888876775 688999999999999998 6897 69999999999
Q ss_pred EEeecccC--------CC--CCccccCC----CCcccCCccccchHHHHHHHHHHHhCCCCeeeeccCCCCCceEEeccc
Q 004052 535 LLKSVLRE--------GK--EEWVPIDF----TPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGH 600 (776)
Q Consensus 535 l~~~~~~~--------~~--~~~~p~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~ 600 (776)
||++.... |+ .+..|... .+||...+ +...+++++|++.|+++||+|++.|+|+|||||||++.|
T Consensus 220 Lfd~~~~~~r~dl~~tGrtl~G~~P~kgq~l~d~Yf~~~p-d~~~~~~~di~~~L~~~GI~ve~~H~EvaPGQ~EI~~~~ 298 (729)
T 3o6x_A 220 LVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIP-PRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIF 298 (729)
T ss_dssp EEEHHHHHSCTTHHHHSSCSCCCC--------------CC-HHHHHHHHHHHHHHHHHTCCEEEECBCSSTTEECCEECC
T ss_pred EEecchhccCcccccccccccCCCCCCCCCCCCccCCCCc-hhHHHHHHHHHHHHHHCCCCeEEeecCCCCCceEeccCC
Confidence 99975221 11 12233211 26776655 778999999999999999999999999999999999999
Q ss_pred chHHHhhhHHHHHHHHHHHHHHHcCCeeEecccccCCCCCccceeeeccccC-CccccccCCCCCCC---CCcHHHHHHH
Q 004052 601 TVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQN-GENVFMASDSSSKH---GMSSVGEKFM 676 (776)
Q Consensus 601 ~~~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpKP~~~~~GsG~HvH~Sl~~~-g~n~f~~~d~~~~~---~ls~~~~~fi 676 (776)
.++++|||+++++|++||+||++||+.|||||||+.+.+|||+|+|+|||++ |+|+|.+. +++. ++|.++++||
T Consensus 299 ~~al~AAD~~~l~K~vvK~VA~~hGl~ATFMPKP~~g~nGSG~HvH~SL~~~~G~NLF~~~--d~~~~~~~~s~~~~~fI 376 (729)
T 3o6x_A 299 ENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPG--KNPKGNMLFLTFLVNVL 376 (729)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHTTEEEECSSCSSTTSCCCBEEEEEEEEETTCCCSSCCC--SSTTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCCCCcceeeccccCCCCCcCCCCC--CCccchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999976 89999843 3333 4688899999
Q ss_pred HHHHHHHHHhHhhhCCCCCcccCCCCCCcCCcc----------------cc-----------------cc----------
Q 004052 677 AGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAY----------------QC-----------------WG---------- 713 (776)
Q Consensus 677 aGil~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~----------------~~-----------------WG---------- 713 (776)
||||+|+++|+||++|++||| || |++|||++ +. ||
T Consensus 377 aGVLkHa~aL~A~~aPt~NSY-RL-~g~EAP~~iisi~lG~~l~~vl~~i~~~~~g~~~~~~~~~~~~~Gv~~lP~~~~d 454 (729)
T 3o6x_A 377 MMVHKNQDLLRASIMSAGNSH-RL-GANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLD 454 (729)
T ss_dssp HHHHHTHHHHHHHSCCHHHHT-TS-SSSSCCCSCCCEECCHHHHHHHHCC------------------------------
T ss_pred HHHHHhHHHHHHHhCCCcccc-cc-CCCcCCchhhhhhhhHHHHHHHHHHHhhccCCCCCccccccccCCcccCCCCccC
Confidence 999999999999999999999 99 99999987 44 34
Q ss_pred --cCCCCCcccccCCCCCCCCCccEEEEcCCCCCCc---HHHHHHHHHHHHHhhhhc-CCC
Q 004052 714 --KENREAPLRTACPPGVKDGVVSNFELKSFDGCAN---PHLGLAAIIASGIDGLRR-LCL 768 (776)
Q Consensus 714 --~~NR~a~iRi~~~~~~~~~~~~~~E~R~~d~~aN---PYL~lAailaAGl~Gi~~-l~~ 768 (776)
.+||++|+|+. | +|||+|++|+++| |||+++|++|+||+||++ ++-
T Consensus 455 ~~drNRTspfaft---G------nrfEfR~~Gss~n~a~P~l~lnaivA~~L~gi~~~Le~ 506 (729)
T 3o6x_A 455 TTDRNRTSPFAFT---G------NRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK 506 (729)
T ss_dssp ---CCCSSSSCBC---S------SSEEETTSBSSSCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCccccCCCcccc---C------CeeEEecCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 39999999985 3 4899999999999 999999999999999999 874
No 11
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=100.00 E-value=1.9e-57 Score=503.29 Aligned_cols=362 Identities=29% Similarity=0.433 Sum_probs=304.7
Q ss_pred hhHHHHHhccCCccccCCCCcccCCCC---cchhhccccccCCCc-cCCCcchhhHhHHHHHHhhhCCCC--CHHHHHHH
Q 004052 3 FEELREVVENIELVDGHAHNIVSLDSS---FPFIQSFSEATGPAL-SYAPYSLSFKRNLKNIAELYGCDS--SLQAVEEY 76 (776)
Q Consensus 3 ~~~l~~~i~~~p~iD~H~H~~~~~~~~---~~~~~~~~ea~~~~~-~~~~~~~~~~~~~~~l~~~fg~~~--~~~~i~~~ 76 (776)
+++|+++|+++|||||||||++..+.. +||+.++|||+|+++ .+++.+++ .++++. |||++ |+++||++
T Consensus 2 ~~~l~~~~~~~~~id~h~h~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~-fg~~~~~~a~~i~~~ 76 (376)
T 2qpx_A 2 MDDLSEFVDQVPLLDHHCHFLIDGKVPNRDDRLAQVSTEADKDYPLADTKNRLA----YHGFLA-LAKEFALDANNPLAA 76 (376)
T ss_dssp CCCCHHHHHHCCEEEEEECCBBCTTCSCHHHHHHHHTSSCCTTSCHHHHTTSHH----HHHHHH-HHHHHCSSTTSTTCC
T ss_pred hHHHHHHHhcCCccccCCccccCcccccccCchHhhhccCCCccccccChhhHH----HHHHHh-CCCCCCCCHHHHHHH
Confidence 357899999999999999999988754 499999999999986 45666666 456666 99998 78889999
Q ss_pred HHHcCcccHHHHHHhhCCeEEEEEeCCCC-CCCCCChHHHHhhccc-cceEEeccchHHHHHHHhCCCCCcccHHHHHHH
Q 004052 77 RRAAGLQSICSICFEAANISAVLIDDGLK-LDKKHGLDWHKSLVPF-VGRILRIERLAEEILDQASPDGSIWTLDVFIET 154 (776)
Q Consensus 77 ~~~l~~~~~~r~ll~~~~v~~i~~d~g~~-~d~~~~~~~h~~~~~~-~~~i~riE~~a~~~~~~~~~~~~~~~~~~~~~a 154 (776)
|+++++++++|+||+++||++||+|||+. +||+++++||+++++. +.+|+|||.+++..... +.+|++|+++
T Consensus 77 ~~~~~~~~~~r~~l~~~~v~~~~~dt~~~~ddp~~~l~~h~~~~~~~~~~~~~ie~~~~~~~~~------~~~~~~~~~~ 150 (376)
T 2qpx_A 77 MNDPGYATYNHRIFGHFHFKELLIDTGFVPDDPILDLDQTAELVGIPVKAIYRLETHAEDFMLE------HDNFAAWWQA 150 (376)
T ss_dssp CCHHHHHHHHHHHHHHTTEEEEEEETTCCCSSBCCCHHHHHHHHTSCEEEEEEHHHHHHHHHTT------CSSHHHHHHH
T ss_pred HHhcCHhHHHHHHHHHCCceEEEecCCCCCCCCCCCHHHHHHhcCcchhheeccchHHHHHhcc------cccHHHHHHH
Confidence 99888889999999999999999999975 4669999999999864 67999999987655433 3579999999
Q ss_pred HHHHHHhhc-cccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEe
Q 004052 155 FLKQLRSAA-NKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIH 233 (776)
Q Consensus 155 l~~~l~~~~-~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~a~e~glPvq~H 233 (776)
|+++|+++. .+++|||||.|||+||++.+ .++++++++|+|++.++ +..++++.+..+++++++++|+++|+|||+|
T Consensus 151 ~~~~l~~~~~~g~~gfksv~~~~~gl~~~~-~~~~~a~~~~~~~~~~~-~~~~~d~~~~p~~l~~~~e~a~e~glpv~iH 228 (376)
T 2qpx_A 151 FSNDVKQAKAHGFVGFKSIAAYRVGLHLEP-VNVIEAAAGFDTWKHSG-EKRLTSKPLIDYMLYHVAPFIIAQDMPLQFH 228 (376)
T ss_dssp HHHHHHTTTTTTCCCEEECHHHHTCSCCCC-CCHHHHHHHHHHHHHHC-CCSCCCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCceeccceEecCCCCCCC-CCHHHHHHHHHHHHcCC-CCCccchhHhHHHHHHHHHHHHHCCCeEEEE
Confidence 999999986 59999999999999999664 47999999999999753 4567778888888999999999999999999
Q ss_pred cCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeecccccCCCccHHHHHHHHHHHHH
Q 004052 234 TGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLE 313 (776)
Q Consensus 234 ~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le 313 (776)
+|.++.+.+...+.|..+.+++++.+||+++||+.| |+|+++++..++..|+|||+|+|| ++...++++...++++++
T Consensus 229 ~g~~d~~~~~~~~~p~~l~~ll~~~~~P~lkiVl~H-g~~~~~~~~~l~~~~~nvy~d~s~-~~~~~~~~~~~~l~~l~~ 306 (376)
T 2qpx_A 229 VGYGDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLH-CYPYHREAGYLASVFPNLYFDISL-LDNLGPSGASRVFNEAVE 306 (376)
T ss_dssp ESCCCTTSCGGGCCGGGGHHHHHHHGGGTCCEEEEE-CTTCHHHHHHHHHHSTTEEEECTT-HHHHSGGGHHHHHHHHTS
T ss_pred eCCCCCCCCccccCHHHHHHHHhcCCCCCCcEEEEC-CCccHHHHHHHHHhCCCEEEeccc-ccccChhhHHHHHHHHHH
Confidence 998766666777889999999985569999999999 899999989999999999999998 332334578889999999
Q ss_pred HCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhh-HHHHHHHHHHHhHHHHhCCCCC
Q 004052 314 LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE-AIEVAKDIFALNAAQFYKINLG 383 (776)
Q Consensus 314 ~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~e-a~~~~~~Il~~NA~rly~l~~~ 383 (776)
..|.+|||||||++.+|+.+|++++++++.+++++++ ..++..+ ..+.+++|+++||+|||+++.+
T Consensus 307 ~~g~dRiLfGSD~P~~~e~~~~~~~~~~~~l~~l~~~----~~ls~~~~~~~~~~~I~~~NA~rlf~l~~~ 373 (376)
T 2qpx_A 307 LAPYTRILFASDASTYPEMYGLAARQFKQALVAHFNQ----LPFVDLAQKKAWINAICWQTSAKLYHQERE 373 (376)
T ss_dssp SSCGGGEECCCCCCBSHHHHHHHHHHHHHHHHHHHHT----CSSCCHHHHHHHHHHHHTHHHHHHTTCGGG
T ss_pred hcCCCCEEEECCCCccchhhcccHHHHHHHHHHHHcc----cCcchhhcCHHHHHHHHHHhHHHHhCCCCC
Confidence 9999999999997777765677777889998887653 1244222 3466999999999999998654
No 12
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=100.00 E-value=3e-53 Score=469.79 Aligned_cols=359 Identities=15% Similarity=0.133 Sum_probs=295.1
Q ss_pred hHHHHHhccCCccccCCCCcccCC-CCcchhhcccc--------------ccCC--------C------------ccCCC
Q 004052 4 EELREVVENIELVDGHAHNIVSLD-SSFPFIQSFSE--------------ATGP--------A------------LSYAP 48 (776)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~-~~~~~~~~~~e--------------a~~~--------~------------~~~~~ 48 (776)
.+|++.++++||||+|||...... .+.+|+.++ | +.|. + +....
T Consensus 27 ~~Ly~~~~~~PIiD~HcHl~p~~i~~~~~F~ni~-e~wl~gDHYkwr~mRa~Gv~e~~itg~~~~~ekf~~~a~~~~~~~ 105 (463)
T 1j5s_A 27 VRLFNEVKDLPIVDPHNHLDAKDIVENKPWNDIW-EVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFV 105 (463)
T ss_dssp HHHHHHHTTSCEEESCCCCCHHHHHHTCCCSCHH-HHHTTTCHHHHHHHHHTTCCGGGTTSSSCHHHHHHHHHHHGGGGT
T ss_pred HHHHHHhccCCeecCccCCCHHHhccccCcccHH-HHhccCchHHHHHHhhcCCChhhhcCCCCHHHHHHHHHhhhHHhc
Confidence 368888899999999999887432 123565555 2 1121 1 12356
Q ss_pred cchhhHhHHHHHHhhhCCCC-----CHHHHHHHHHHcCcccHHHHHHhhCCeEEEEEeCCCCCCCCCChHHHHhhcc---
Q 004052 49 YSLSFKRNLKNIAELYGCDS-----SLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVP--- 120 (776)
Q Consensus 49 ~~~~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~l~~~~~~r~ll~~~~v~~i~~d~g~~~d~~~~~~~h~~~~~--- 120 (776)
++..|.|.+++|+++||+++ ||++||++|+++.+++++|+||+++||++||| |+||+|+|+||++++.
T Consensus 106 Gnply~W~hlel~~~FGi~~~l~~~ta~~i~~~~~e~l~~~~~r~ll~~snV~~v~t----TddP~D~Le~h~~l~~~~~ 181 (463)
T 1j5s_A 106 GNPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCT----TDDPVSTLEHHRKAKEAVE 181 (463)
T ss_dssp TSHHHHHHHHHHHHHSCCCCCCSHHHHHHHHHHHHHHSTTCCHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhchhhhHHHHHHHcCCEEEEe----CCCCCCchHHHHHHhcCCC
Confidence 77888999999999999997 89999999986667789999999999999998 8899999999999642
Q ss_pred --c------cceEEeccchHH-HHHHHhCC--CCCcccHHHHHHHHHHHHHhhccccccceeeec--ccCCC--CCCCCC
Q 004052 121 --F------VGRILRIERLAE-EILDQASP--DGSIWTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGL--EINPHV 185 (776)
Q Consensus 121 --~------~~~i~riE~~a~-~~~~~~~~--~~~~~~~~~~~~al~~~l~~~~~~~vGfksv~~--y~~Gl--~~~~~~ 185 (776)
+ ++++++||...+ ++++++.. +.+|.+|++|++||++|+++ |++++| +|||| +..+.+
T Consensus 182 ~~~v~P~~RPD~~~~ie~~~f~~~v~~L~~~sg~~i~s~~~~~~Al~~r~~~-------F~~~G~~asdhgl~~~~~~~~ 254 (463)
T 1j5s_A 182 GVTILPTWRPDRAMNVDKEGWREYVEKMGERYGEDTSTLDGFLNALWKSHEH-------FKEHGCVASDHALLEPSVYYV 254 (463)
T ss_dssp SCEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHH-------HHTTTCCEEEEEESSCCCCCC
T ss_pred CceeeeccCcchhcccCchhHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHH-------HHHcCcEEEccCCCcccCCCC
Confidence 1 348889997666 77877753 66788999999999999998 555544 79998 555458
Q ss_pred CHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEecCCCC-------------CCCCcCCcC-h--h
Q 004052 186 TKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGD-------------KDLDLRLSN-P--L 249 (776)
Q Consensus 186 ~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~a~e~glPvq~H~G~gd-------------~~~~~~~~~-P--~ 249 (776)
++++++++|+|++++......+...+..+++..+.++|.++|||||+|+|++. .|+|..... + .
T Consensus 255 s~~e~~~if~k~l~g~~ls~~e~~~~~~~ll~~l~~~~~e~g~~mQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~ 334 (463)
T 1j5s_A 255 DENRARAVHEKAFSGEKLTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAE 334 (463)
T ss_dssp CHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHH
T ss_pred CHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEeecCCCCCCHHHHHHhCCCCCCCCccccchHHH
Confidence 89999999999998743333344557778999999999999999999999843 344443333 2 2
Q ss_pred hhHHHHHhcCCCC-cEEEEeCCCCchHHHHHHHHHhCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEE-EecCCC
Q 004052 250 HLRAILEDKRFSK-CRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAY 327 (776)
Q Consensus 250 ~L~~l~~~~~~P~-l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~ 327 (776)
.|..+++ ++++ .|+|+.|+.-.+++++++|+++|||||+|.+|||++. ++||.+++++++|++|++|++ |+||+|
T Consensus 335 ~L~~lL~--~~~~~~k~iLy~Lnp~~~~~la~lag~Fp~vq~g~~WWf~d~-~~gm~~~l~~l~e~~~lskfvGmlTDsR 411 (463)
T 1j5s_A 335 GLRYFLN--EFDGKLKIVLYVLDPTHLPTISTIARAFPNVYVGAPWWFNDS-PFGMEMHLKYLASVDLLYNLAGMVTDSR 411 (463)
T ss_dssp HHHHHHH--HSTTTSCEEEEESSGGGHHHHHHHHHHCTTEEECCCCSTTCS-HHHHHHHHHHHHTTSCGGGCCCCCCCCS
T ss_pred HHHHHHH--hcccCCCeEEEecCHhhHHHHHHHHccCCccccCCchhhcCC-HHHHHHHHHHHHHhcchhccccccccch
Confidence 4888888 6766 7777777733378999999999999999999999985 899999999999999999999 999999
Q ss_pred CCccccc-hhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhC
Q 004052 328 ASPETYF-LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (776)
Q Consensus 328 ~~P~~~~-~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (776)
+| ++| +++++|||+||++|++||++|++|.+++++++++|+|+||+++|+
T Consensus 412 sf--LsY~~rhe~fRRiLc~~Lg~~Ve~G~~p~~~~~~iv~~I~y~NA~~~f~ 462 (463)
T 1j5s_A 412 KL--LSFGSRTEMFRRVLSNVVGEMVEKGQIPIKEARELVKHVSYDGPKALFF 462 (463)
T ss_dssp ST--THHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHC
T ss_pred HH--hhccHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHhC
Confidence 99 488 999999999999999999999999888999999999999999996
No 13
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0
Probab=100.00 E-value=6.5e-52 Score=453.71 Aligned_cols=362 Identities=14% Similarity=0.149 Sum_probs=305.3
Q ss_pred hHHHH-HhccCCccccCCCCccc-----------------CC---------CCcchhhccc-cccCC--------CccCC
Q 004052 4 EELRE-VVENIELVDGHAHNIVS-----------------LD---------SSFPFIQSFS-EATGP--------ALSYA 47 (776)
Q Consensus 4 ~~l~~-~i~~~p~iD~H~H~~~~-----------------~~---------~~~~~~~~~~-ea~~~--------~~~~~ 47 (776)
.+|++ .++++||||-|||---. +| .+.|.+.++. +++.- .+...
T Consensus 20 r~LYh~~a~~lPIiDyH~Hl~P~~iaen~~F~nit~lwl~gDHYkwR~mrs~Gv~e~~itG~~a~~~ekf~~~A~t~p~~ 99 (473)
T 3iac_A 20 RTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETSDYEKYMAWANTVPKT 99 (473)
T ss_dssp HHHHHHTTTTSCEEECSCCCCHHHHHHTCCCSCHHHHHHSSCSHHHHHHHHTTCCGGGTTCTTSCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCCEECCCCCCCHHHhccCCCCCCHHHHhccCchHHHHHHHHcCCCHHHccCCCCChHHHHHHHHHHHHHh
Confidence 46884 89999999999995441 11 3446666655 44431 12356
Q ss_pred CcchhhHhHHHHHHhhhCCCC------CHHHHHHHHH-Hc-CcccHHHHHHhhCCeEEEEEeCCCCCCCCCChHHHHhhc
Q 004052 48 PYSLSFKRNLKNIAELYGCDS------SLQAVEEYRR-AA-GLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLV 119 (776)
Q Consensus 48 ~~~~~~~~~~~~l~~~fg~~~------~~~~i~~~~~-~l-~~~~~~r~ll~~~~v~~i~~d~g~~~d~~~~~~~h~~~~ 119 (776)
-++..|.|.|+||+++|||++ ||++||++++ +| ++++.+|.||+++||++||| ||||+|+|+||++++
T Consensus 100 ~gnPly~W~hleL~r~FGi~~~~L~~~tA~~I~d~~n~~L~~~~f~~r~L~~~~nVe~v~T----TDDP~D~L~~H~~i~ 175 (473)
T 3iac_A 100 LGNPLYHWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGT----TDDPIDSLEYHRQIA 175 (473)
T ss_dssp TTSHHHHHHHHHHHTTTCCCSCCCSHHHHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCHHHHHHHCCcEEEEe----CCCccccHHHHHHHH
Confidence 888899999999999999986 8999999998 45 56799999999999999999 999999999999987
Q ss_pred cc------------cceEEeccchHH-HHHHHhCC--CCCcccHHHHHHHHHHHHHhhccccccceeeecc--cCCCCCC
Q 004052 120 PF------------VGRILRIERLAE-EILDQASP--DGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAY--RSGLEIN 182 (776)
Q Consensus 120 ~~------------~~~i~riE~~a~-~~~~~~~~--~~~~~~~~~~~~al~~~l~~~~~~~vGfksv~~y--~~Gl~~~ 182 (776)
+. +++++.||...+ +++++|+. |++|.+|++|++||++|+++ |++.||. |||++..
T Consensus 176 ~~~~f~~~VlPtfRPD~a~~i~~~~f~~yv~~L~~~sg~~i~~~~~ll~AL~~R~~~-------F~~~Gcr~sDHgl~~~ 248 (473)
T 3iac_A 176 ADDSIDIEVAPSWRPDKVFKIELDGFVDYLRKLEAAADVSITRFDDLRQALTRRLDH-------FAACGCRASDHGIETL 248 (473)
T ss_dssp HCTTCCSEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHH-------HHHTTCCEEEEEESSC
T ss_pred hcCCCCceEeeccCCccccCCCchhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-------HHHcCcEehhcCCccc
Confidence 52 468889998777 88998864 88899999999999999999 7777775 9999865
Q ss_pred CC---CCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEecCC------------C-CCCCCcC--
Q 004052 183 PH---VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLDLR-- 244 (776)
Q Consensus 183 ~~---~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~a~e~glPvq~H~G~------------g-d~~~~~~-- 244 (776)
.+ ++.++++++|.|++++......+...+..++++.+.+++.|.||+||+|.|. | |+|.|..
T Consensus 249 ~~~~~~s~~e~~~if~k~l~G~~ls~~e~~~f~~~~l~~la~~~~e~gwvmQlH~Ga~Rn~n~~~f~~lG~D~G~D~~~d 328 (473)
T 3iac_A 249 RFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGFDSIGD 328 (473)
T ss_dssp CCCCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECCCCHHHHHHHCSSSSCCEECC
T ss_pred ccCCCCCHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHCCCeeeeecccccCCCHHHHHHhCCCCCCCCCCC
Confidence 43 4689999999999987433344455577779999999999999999999998 5 5566543
Q ss_pred --CcChh--hhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCe------eeecccccCCCccHHHHHHHHHHHHHH
Q 004052 245 --LSNPL--HLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ------VYLDFGLAIPKLSVQGMISSIKELLEL 314 (776)
Q Consensus 245 --~~~P~--~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pN------Vyld~s~~~~~~~~~g~~~~l~~~le~ 314 (776)
++.++ +|+.+-..+++|+++++.+++. +.++++.|+++||+ ||++.+|||++. ++||+++++.+.+.
T Consensus 329 ~~~~~~L~~lLd~~~~~~~LpktILy~Lnp~--~n~~latlag~F~~~~~~gkvq~G~~WWFnD~-~~GM~rq~~~l~~~ 405 (473)
T 3iac_A 329 NNISWALSRLLDSMDVTNELPKTILYCLNPR--DNEVLATMIGNFQGPGIAGKVQFGSGWWFNDQ-KDGMLRQLEQLSQM 405 (473)
T ss_dssp CCCHHHHHHHHHHHHTTTCCCEEEEEESSGG--GHHHHHHHGGGSCCTTSTTSEEECCCCGGGCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCeeeEEeCCcc--chHHHHHHHhhcCCCCcCceeEecCcccccCC-HHHHHHHHHHHHHh
Confidence 33333 5666665678999999999997 67889999999999 999999999985 99999999999999
Q ss_pred CCCCcEE-EecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhH--HHHHHHHHHHhHHHHhCCC
Q 004052 315 APTKKVM-FSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEA--IEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 315 ~~~~kil-fgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea--~~~~~~Il~~NA~rly~l~ 381 (776)
++++|++ |.||+|+|. +|++|++|||+||++|++||++|++|.+++ .+++++|+|+||+++|++.
T Consensus 406 g~l~~fvGmltDSRsFl--Sy~RHeyfRRilc~~lg~~Ve~G~~p~D~~~l~~iv~dI~y~nak~yF~~~ 473 (473)
T 3iac_A 406 GLLSQFVGMLTDSRSFL--SYTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK 473 (473)
T ss_dssp SCGGGCCCCCCCCSCTT--TTHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHTHHHHHHTSCC
T ss_pred hhhhcccccccchHhhh--hhHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHhHHHHHhCCC
Confidence 9999999 999999998 679999999999999999999999999887 8999999999999999863
No 14
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=100.00 E-value=1.5e-51 Score=459.94 Aligned_cols=363 Identities=15% Similarity=0.160 Sum_probs=292.9
Q ss_pred hHHHHHhccCCccccCCCCccc---CC-----------------------CCcchhh--c-----cccccC--------C
Q 004052 4 EELREVVENIELVDGHAHNIVS---LD-----------------------SSFPFIQ--S-----FSEATG--------P 42 (776)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~---~~-----------------------~~~~~~~--~-----~~ea~~--------~ 42 (776)
.+|++.++++||||-|||-.-. .+ .+.|.+. | +.+++. .
T Consensus 26 ~~Ly~~a~~~PIiDyH~Hl~p~~iaen~~f~~i~elwl~gdHYkwr~mRa~Gv~e~~~~i~~~~gtg~~~~~ekf~~~a~ 105 (497)
T 2q01_A 26 RGLYALVKDLPIISPHGHTDPSWFATNAPFQDATDLLLAPDHYLFRMLYSQGVSLDALKVRSKAGVPDTDPREAWRVFAS 105 (497)
T ss_dssp HHHHHTTTTSCEEECSCCCCTHHHHHCCCCCCHHHHTTSSCHHHHHHHHTTTCCSTTTTCCBTTBSCSSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCeecCccCCCHHHHhhcCCCCCHHHHhccCcHHHHHHHHHcCCChhhhcccccccCCCCCHHHHHHHHHH
Confidence 3688888999999999996542 11 1122221 2 222221 1
Q ss_pred CccCCCcchhhHhHHHHHHhhhCCCC-----CHHHHHHHHHH-cCcc-cHHHHHHhhCCeEEEEEeCCCCCCCCCChHHH
Q 004052 43 ALSYAPYSLSFKRNLKNIAELYGCDS-----SLQAVEEYRRA-AGLQ-SICSICFEAANISAVLIDDGLKLDKKHGLDWH 115 (776)
Q Consensus 43 ~~~~~~~~~~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~-l~~~-~~~r~ll~~~~v~~i~~d~g~~~d~~~~~~~h 115 (776)
.+....+|..|.|.|++|+++|||++ |+++||++||+ ++.+ +.+|.||+++||++||| |+||+|+|+||
T Consensus 106 ~~~~~~gnPly~W~hleL~~~FGi~~~l~~~ta~~i~~~~ne~l~~~~~~~R~Ll~~snV~~v~T----TddP~D~Le~h 181 (497)
T 2q01_A 106 HFYLFRGTPSWVWLNHVFSQVFGFTEFLEASNADDYFDRITAALATDAFRPRALFDRFNIETLAT----TEGPHESLQHH 181 (497)
T ss_dssp TGGGGTTSHHHHHHHHHHHHTTCCCBCCCTTTHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTSCCHHH
T ss_pred HhHHhcCCHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhcCccchHHHHHHHcCCEEEEe----CCCCCcchhhH
Confidence 12246788899999999999999986 99999999986 5544 67999999999999998 88999999999
Q ss_pred Hhhcc-----c------cceEEeccchHH-HHHHHhCC--CCCcccHHHHHHHHHHHHHhhccccccceeeec--ccCCC
Q 004052 116 KSLVP-----F------VGRILRIERLAE-EILDQASP--DGSIWTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGL 179 (776)
Q Consensus 116 ~~~~~-----~------~~~i~riE~~a~-~~~~~~~~--~~~~~~~~~~~~al~~~l~~~~~~~vGfksv~~--y~~Gl 179 (776)
++++. + ++++++||...+ ++++++.. |.+|.+|++|+++|++|+++ |++++| +||||
T Consensus 182 ~~l~~~~f~~~v~PafRpD~~l~ie~~~f~~~v~~L~e~sg~~i~s~~~~~~AL~~r~~~-------F~~~Gc~asdhgl 254 (497)
T 2q01_A 182 AAIRESGWGGHVITAYRPDAVIDFEDERSPRAFERFAETSGQDVYSWKSYLEAHRLRRQA-------FIDAGATSSDHGH 254 (497)
T ss_dssp HHHHHSSCCCCEECCBCCCTTTCTTCTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHH-------HHHTTCCEEEECC
T ss_pred HHHhhCCCCceeeeccCchhhcCCCcccHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-------HHHcCCEEeccCC
Confidence 98642 2 348889998766 88877753 66788999999999999998 445544 79999
Q ss_pred CCCCC--CCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEecCC------------C-CCCCC--
Q 004052 180 EINPH--VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLD-- 242 (776)
Q Consensus 180 ~~~~~--~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~a~e~glPvq~H~G~------------g-d~~~~-- 242 (776)
+..+. +++++++++|+|+++++. ...+...+..+++..+.++|.++|||||+|+|+ | |+|+|
T Consensus 255 ~~~~~~~~s~~e~~~if~k~l~g~~-s~~e~~~~~~~ll~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~ 333 (497)
T 2q01_A 255 PTAATADLSDVEAEALFNSLVKGDV-TPEKAELFRAQMLTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIP 333 (497)
T ss_dssp SSCCCCCCCHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEE
T ss_pred cccCCCCCCHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCC
Confidence 83322 679999999999998742 333334677789999999999999999999998 4 45543
Q ss_pred --cCCcChh--hhHHHHHhcCCCCcEEEEeCCCCc--hHHHHHHHHHhCCeeeecccccCCCccHHHHHHHHHHHHHHCC
Q 004052 243 --LRLSNPL--HLRAILEDKRFSKCRFVLLHASYP--FSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAP 316 (776)
Q Consensus 243 --~~~~~P~--~L~~l~~~~~~P~l~ivl~H~g~p--~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~ 316 (776)
..+++|+ +|+.+. .+|+.|+|+.|+ +| |++++++|+++|||||+|.+|||++. ++||.+++++++|++|
T Consensus 334 ~~~~~a~~L~~lL~~l~---~~~~pktILy~L-np~~y~~elatlag~Fpkvq~G~~WWF~d~-~~gm~~ql~~l~el~~ 408 (497)
T 2q01_A 334 MRTEYVDALKPLLTRLG---NDPRLSIILFTL-DETTYSRELAPLAGHYPVLKLGPSWWFHDS-PEGMMRFREQVTETAG 408 (497)
T ss_dssp CCCCCTTTSHHHHHHHT---TCTTCCEEECCS-CTTHHHHTHHHHHTTCTTEEECCCCGGGCS-HHHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHHHHh---hcCCCCeEEEeC-CcchhHHHHHHHHccCCccccCCchhhccC-hHHHHHHHHHHHHhhc
Confidence 3456664 444433 465566666666 44 79999999999999999999999985 8999999999999999
Q ss_pred CCcEE-EecCCCCCccccch-hhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCCCcc
Q 004052 317 TKKVM-FSTDAYASPETYFL-GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVK 385 (776)
Q Consensus 317 ~~kil-fgSD~~~~P~~~~~-~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~~ 385 (776)
++||+ |+||+|+|+ +|+ ++++|||+||++|++||+++.|+.+||.+++++|+++||+|+|+|+..|.
T Consensus 409 lskfvGmlTDsRsfl--Sy~~RheyfRRiLc~vLg~~V~~~~lse~eA~r~a~~l~~~Na~r~Y~l~~~~~ 477 (497)
T 2q01_A 409 FYNTVGFNDDTRAFL--SIPARHDVARRVDSAFLARMVAEHRMDLVEAEELIVDLTYNLPKKAYKLDQRPD 477 (497)
T ss_dssp STTBCCCCCCCSCGG--GHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHTTCCSCCT
T ss_pred hhcccccccchhHhh--hhhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhHHHHhCCCCCcc
Confidence 99999 999999998 478 99999999999999999999999999999999999999999999988764
No 15
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A*
Probab=100.00 E-value=1.3e-36 Score=331.26 Aligned_cols=336 Identities=15% Similarity=0.116 Sum_probs=246.0
Q ss_pred hHHHHHhccCCccccCCCCcccCC-CCcchhhccccc-------------cCCCcc-----------CCCcch--hhHhH
Q 004052 4 EELREVVENIELVDGHAHNIVSLD-SSFPFIQSFSEA-------------TGPALS-----------YAPYSL--SFKRN 56 (776)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~-~~~~~~~~~~ea-------------~~~~~~-----------~~~~~~--~~~~~ 56 (776)
.+|++.++++||||-|||-.-..- .+. |.. ++|- .|-.-+ .+-++. .|.|.
T Consensus 13 ~~Ly~~a~~~PIiDyH~HL~P~~iae~~-f~n-i~elwgdHYkw~r~mRa~Gv~e~~~iT~s~~ekA~~vgnplflyhW~ 90 (437)
T 2qee_A 13 EKVKNAVNNQPVTDMHTHLFSPNFGEIL-LWD-IDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLIWEELFIKRSP 90 (437)
T ss_dssp HHHHHHHHHSCEEECSCSCCCGGGCTTS-BCS-HHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHhcCCeeccccCCCHHHHHhcc-cCC-HHhccccHHHHHHHHHHcCCCHHHhcCCCHHHHHHHhCCCcceeech
Confidence 367888899999999999665311 011 211 1111 110000 000223 45677
Q ss_pred HHH--------HHhhhCCCC---CHHHHHHHHH-HcCcccHHHHHHhhCCeEEEEEeCCCCCCCCCChH---HHHhhcc-
Q 004052 57 LKN--------IAELYGCDS---SLQAVEEYRR-AAGLQSICSICFEAANISAVLIDDGLKLDKKHGLD---WHKSLVP- 120 (776)
Q Consensus 57 ~~~--------l~~~fg~~~---~~~~i~~~~~-~l~~~~~~r~ll~~~~v~~i~~d~g~~~d~~~~~~---~h~~~~~- 120 (776)
|+| |++ ||++. ||++ |++++ +++.+.++|.+|+++||++||| ||||+|+|+ ||+++-.
T Consensus 91 hlEa~~~~~t~L~r-FGid~~~~ta~~-~~~~n~~l~~~~~~r~ll~~~nV~~v~T----TdDP~D~Le~~~~h~~~f~~ 164 (437)
T 2qee_A 91 VSEACRGVLTCLQG-LGLDPATRDLQV-YREYFAKKTSEEQVDTVLQLANVSDVVM----TNDPFDDNERISWLEGKQPD 164 (437)
T ss_dssp CSHHHHHHHHHHHH-TTCCGGGCCHHH-HHHHHHTCCHHHHHHHHHHHTTEEEEEC----CBCTTSHHHHHHHHTTCCCC
T ss_pred hhhcccchhHHHHH-cCCCCCccCHHH-HHHHHHHhCcccHHHHHHHHcCCeEEEe----CCCCCCchhhhHHHhhcCCC
Confidence 888 999 99996 9999 99997 4565555999999999999999 899999999 9999533
Q ss_pred -ccceEEeccchHH---HHHHHhCC-CCCc------ccHHHHHHHHHHHHHhhccccccceeeec--ccCCCCC-CCCCC
Q 004052 121 -FVGRILRIERLAE---EILDQASP-DGSI------WTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGLEI-NPHVT 186 (776)
Q Consensus 121 -~~~~i~riE~~a~---~~~~~~~~-~~~~------~~~~~~~~al~~~l~~~~~~~vGfksv~~--y~~Gl~~-~~~~~ 186 (776)
++...+|+.++.. +++.+|.. |.++ .+|+++++||++|.+ +.+| .+|||+. ...++
T Consensus 165 ~rv~Pa~RpD~~l~~f~~~v~~L~~sg~~i~~~~~~~t~~~~~~AL~~rF~----------~~Gc~~sDh~l~~~~~~~~ 234 (437)
T 2qee_A 165 SRFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWIE----------RMDPVYMAVSLPPTFSFPE 234 (437)
T ss_dssp TTEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHHH----------HHCCSCEEEEECTTCCSSC
T ss_pred ceEeecCCchHHHhhHHHHHHHHHhcCCCcccCcccCCHHHHHHHHHHHHH----------HhCCEEEEecCCcCcCCCC
Confidence 3556677777542 66666643 5566 789999999999833 3445 4888865 22221
Q ss_pred HHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEecCCC-CC------CCC-cCCcChhhhHHHHHhc
Q 004052 187 KKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFG-DK------DLD-LRLSNPLHLRAILEDK 258 (776)
Q Consensus 187 ~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~a~e~glPvq~H~G~g-d~------~~~-~~~~~P~~L~~l~~~~ 258 (776)
..+ ..++..+.++++|+|+|||||+|+|.- +. +.| +..+++..|..++.
T Consensus 235 ~~~---------------------~~~~~~~~l~~~~~e~gwvmQlHiGa~Rn~n~~~~~g~D~i~~~~~~~L~~ll~-- 291 (437)
T 2qee_A 235 ESN---------------------RGRIIRDCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLR-- 291 (437)
T ss_dssp SSH---------------------HHHHHHHTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHH--
T ss_pred CCH---------------------HHHHHHHHHHHHHHhCCCeEEEecCcccCCCHHhccCCCCCCccCHHHHHHHHH--
Confidence 111 133444448999999999999999973 11 111 12233456788888
Q ss_pred CCCCcEEEEeCCCCchHHHHHHHHHhCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEE-EecCCCCCccccchhh
Q 004052 259 RFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYASPETYFLGA 337 (776)
Q Consensus 259 ~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~~P~~~~~~~ 337 (776)
+||+.+|...+.+.....+++.++++|||||++.+|||++. ++||+++++.+++..+ .+++ |.||+|+|.. +++++
T Consensus 292 ~~~~~~lpktiLn~~~n~elat~ag~Fpnvq~g~~WWF~d~-p~gm~~q~~~~l~lL~-~~fvGmlTDsRsfls-yi~Rh 368 (437)
T 2qee_A 292 EYPNNKFLVTMLSRENQHELVVLARKFSNLMIFGCWWFMNN-PEIINEMTRMRMEMLG-TSFIPQHSDARVLEQ-LIYKW 368 (437)
T ss_dssp HCTTSCEEEEESCGGGHHHHHHHHHHCTTEEEBCCCGGGCS-HHHHHHHHHHHHHHHT-TCSBCCCCCCSBTTH-HHHHH
T ss_pred hCcccCCCeeecChhhHHHHHHHHccCCcceecCcccccCC-HHHHHHHHHHHHHHhC-cCcccCccchhHHhc-cchHH
Confidence 78887776666655667889999999999999999999885 8999999999988888 6666 9999999994 23899
Q ss_pred HHHHHHHHHHhhhh----hccCCCChhh--HHHHHHHHHHHhHHHHhCCCCCc
Q 004052 338 KRAREVVFSVLRDT----CIDEDLSVGE--AIEVAKDIFALNAAQFYKINLGV 384 (776)
Q Consensus 338 ~~~r~~l~~~l~~~----v~~g~l~~~e--a~~~~~~Il~~NA~rly~l~~~~ 384 (776)
++|||+||++|++| |++|+++ ++ .++++++|||+||+++|++..-.
T Consensus 369 eyfRRilc~~Lg~~~~~lve~G~~p-d~~~l~~~v~~I~y~Na~~yf~~~~~~ 420 (437)
T 2qee_A 369 HHSKSIIAEVLIDKYDDILQAGWEV-TEEEIKRDVADLFSRNFWRFVGRNDHV 420 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHTHHHHHHHTCC---
T ss_pred HHHHHHHHHHHHHHHHhhhhCCCCC-CHHHHHHHHHHHHHHHHHHHhccccce
Confidence 99999999999999 9999999 55 46999999999999999987554
No 16
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.79 E-value=3.4e-19 Score=190.23 Aligned_cols=191 Identities=20% Similarity=0.264 Sum_probs=139.5
Q ss_pred HhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC------CchhhhhHHHHHHHHHHhhCCCcEEE
Q 004052 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI------TNKSLIDYIFISSLEVAQFLDLPLQI 232 (776)
Q Consensus 160 ~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~~------~~~~l~d~~l~~l~e~a~e~glPvq~ 232 (776)
+.++++++||.+ ++|. +.+++.++++++...+ ++.++ ....+++..+.++++.|+++|+||++
T Consensus 87 ~~~p~r~~~~~~---------v~p~-~~~~a~~eL~~~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~i 156 (291)
T 3irs_A 87 KAYPDKFHPVGS---------IEAA-TRKEAMAQMQEILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIM 156 (291)
T ss_dssp HHSTTTEEEEEE---------CCCS-SHHHHHHHHHHHHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEE
T ss_pred HHCCCcEEEEEe---------cCcc-CHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEE
Confidence 457778888887 6654 4566778888833322 22221 12346788999999999999999999
Q ss_pred ecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeecccccCCCccHHHHHHHHHHHH
Q 004052 233 HTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELL 312 (776)
Q Consensus 233 H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~l 312 (776)
|+|... +.+..+++|..+.++++ +||+++||+.|+|+||..++..++..++|||+|+|+++... + +. ..+.+++
T Consensus 157 H~~~~~-~~~~~~~~p~~~~~v~~--~~P~l~ivl~H~G~~~~~~~~~l~~~~~nvy~~~Sg~~~~~-~-~~-~~~~~~~ 230 (291)
T 3irs_A 157 MTGGNA-GPDITYTNPEHIDRVLG--DFPDLTVVSSHGNWPWVQEIIHVAFRRPNLYLSPDMYLYNL-P-GH-ADFIQAA 230 (291)
T ss_dssp ECSSSC-SSSGGGGCHHHHHHHHH--HCTTCCEEEEGGGTTCHHHHHHHHHHCTTEEEECGGGGSSS-T-TH-HHHHHHH
T ss_pred eCCCCC-CCCCccCCHHHHHHHHH--HCCCCEEEeecCCcccHHHHHHHHhHCCCeEecHHHHhccC-C-CH-HHHHHHH
Confidence 998641 22455678889999999 89999999999999999888888889999999999986422 1 22 2456688
Q ss_pred HHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCCCc
Q 004052 313 ELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (776)
Q Consensus 313 e~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (776)
+..|.+||||||| ||... .. ..+. .+.+ -.++ + +.+++|+++||+|||+++...
T Consensus 231 ~~~g~drllfgSD---~P~~~---~~---~~~~-~~~~----l~l~--~--e~~~~i~~~NA~rl~~~~~~~ 284 (291)
T 3irs_A 231 NSFLADRMLFGTA---YPMCP---LK---EYTE-WFLT----LPIK--P--DAMEKILHGNAERLLAQAGRE 284 (291)
T ss_dssp TTGGGGTBCCCCC---BTSSC---HH---HHHH-HHHT----SSCC--H--HHHHHHHTHHHHHHHHHSCC-
T ss_pred HHhCcceEEEecC---CCCCC---HH---HHHH-HHHH----CCCC--H--HHHHHHHHHHHHHHhCccccc
Confidence 8889999999999 77422 11 1221 1121 2355 3 779999999999999986543
No 17
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=99.75 E-value=2.9e-18 Score=184.83 Aligned_cols=193 Identities=18% Similarity=0.221 Sum_probs=132.0
Q ss_pred HHHHHHhhccccc-cceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CCchhhhhHHHHHHHHHHhhCC
Q 004052 155 FLKQLRSAANKIV-GLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----ITNKSLIDYIFISSLEVAQFLD 227 (776)
Q Consensus 155 l~~~l~~~~~~~v-Gfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~----~~~~~l~d~~l~~l~e~a~e~g 227 (776)
+.+.++.+++++. ||.. +++. +++++.++++|++++ + ++.+ .....++|..+.|+|+.|+++|
T Consensus 86 l~~~~~~~p~rf~g~~a~---------vp~~-~~~~a~~el~r~~~~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g 155 (312)
T 3ij6_A 86 LSNLVDQHPGKFAGAVAI---------LPMN-NIESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLH 155 (312)
T ss_dssp HHHHHHHCTTTEEEEEEE---------CCTT-CHHHHHHHHHHHHHCTTEEEEEEESEETTEETTSTTTHHHHHHHHHTT
T ss_pred HHHHHHhCCCceeeeEEe---------cCcc-CHHHHHHHHHHHHHhCCCceEeccCCCCCCCCCCccHHHHHHHHHHcC
Confidence 3344556788988 6887 5443 678889999999864 2 2222 2345678889999999999999
Q ss_pred CcEEEecCCCCCCC--CcCCc----Ch-----hhhHHHHHhcCCCCcEEEEeCCC--CchHHHHHH------HHHhCCee
Q 004052 228 LPLQIHTGFGDKDL--DLRLS----NP-----LHLRAILEDKRFSKCRFVLLHAS--YPFSKEASY------LAYVYPQV 288 (776)
Q Consensus 228 lPvq~H~G~gd~~~--~~~~~----~P-----~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~~------la~~~pNV 288 (776)
+||++|+|.+.... ..... .+ +.+.++++ |||++|||+.|+| .||..+... .+..++||
T Consensus 156 ~pv~iH~g~~~~~p~~~~~~~~~~~~~~~~~~li~~gv~~--rfP~Lkii~~H~Gg~~P~~~~r~~~~~~~~~~~~~~nv 233 (312)
T 3ij6_A 156 VPLWMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQ--DYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDFKKF 233 (312)
T ss_dssp CCEEEECCCCTTSSSCCTTTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTTTTSHHHHHHHSCHHHHHHGGGC
T ss_pred CeEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHcChHh--hCCCCeEEecCCcccHHHHHHHHHHhcccchHHHcCeE
Confidence 99999998642211 11010 11 23357788 8999999999997 577654432 34567999
Q ss_pred eecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhh--HHHHHHHHHHhhhhhccCCCChhhHHHHH
Q 004052 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGA--KRAREVVFSVLRDTCIDEDLSVGEAIEVA 366 (776)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~--~~~r~~l~~~l~~~v~~g~l~~~ea~~~~ 366 (776)
|+|+|+.+. ...++.+++..|.+||||||| ||...++.. ....+. +++-.++ + +.+
T Consensus 234 y~dts~~~~-------~~~l~~~~~~~g~drilfgSD---~P~~~~p~~~~~~~~~~--------l~~l~l~--~--~~~ 291 (312)
T 3ij6_A 234 YVDTAILGN-------TPALQLAIDYYGIDHVLFGTD---APFAVMPSGADQIITQA--------INDLTIS--D--KDK 291 (312)
T ss_dssp EEECCSSSC-------HHHHHHHHHHHCGGGEECCCC---BTSSSTTTCSHHHHHHH--------HHTSSSC--H--HHH
T ss_pred EEeCCCCCC-------HHHHHHHHHhCCCCeEEEeCC---CCCCcCCCcchHHHHHH--------HHHcCCC--H--HHH
Confidence 999998652 245788888999999999999 774322211 112222 2222355 3 679
Q ss_pred HHHHHHhHHHHhCCC
Q 004052 367 KDIFALNAAQFYKIN 381 (776)
Q Consensus 367 ~~Il~~NA~rly~l~ 381 (776)
++|+++||+|||+-+
T Consensus 292 ~~i~~~NA~rl~~~~ 306 (312)
T 3ij6_A 292 QKIFHDNYYSLIKEG 306 (312)
T ss_dssp HHHHTHHHHHHHCC-
T ss_pred HHHHHHHHHHHHhCc
Confidence 999999999999853
No 18
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=99.73 E-value=5.4e-18 Score=186.79 Aligned_cols=189 Identities=17% Similarity=0.248 Sum_probs=131.9
Q ss_pred HHHHHHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCcC----CchhhhhHHHHHHHHHHhhCCC
Q 004052 155 FLKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDL 228 (776)
Q Consensus 155 l~~~l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~~----~~~~l~d~~l~~l~e~a~e~gl 228 (776)
+.+.++.+++++.||.+ +++. +++++.++++|+++. + ++.++ .+..++|..++|+|+.|+++|+
T Consensus 136 l~~~~~~~P~Rf~g~a~---------v~~~-~~~~a~~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~ 205 (373)
T 4inf_A 136 LADACQKYPDRFIGMGT---------VAPQ-DPEWSAREIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQ 205 (373)
T ss_dssp HHHHHHHSTTTEEECBC---------CCTT-SHHHHHHHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTC
T ss_pred HHHHHHhCCCEEEEEEe---------cCCC-CHHHHHHHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCC
Confidence 34445677899999988 6654 577788999999975 3 33222 3456788899999999999999
Q ss_pred cEEEecCCCCCCCC-----cCCc--------------ChhhhHHHHHhcCCCCcEEEEeCCC--CchHHHHHHHHH----
Q 004052 229 PLQIHTGFGDKDLD-----LRLS--------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYLAY---- 283 (776)
Q Consensus 229 Pvq~H~G~gd~~~~-----~~~~--------------~P~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~~la~---- 283 (776)
||++|+|.+..... .... ..+.+.++++ |||++|||+.|+| .||..+....+.
T Consensus 206 pV~iH~g~~~~~~~~p~~~~~~~~~~~g~~~et~~~~~~Li~~gv~~--rfP~LkiilaH~Gg~~P~~l~Rld~~~~~~~ 283 (373)
T 4inf_A 206 PLYIHPATSPDSMIDPMLEAGLDGAIFGFGVETGMHLLRLITIGIFD--KYPSLQIMVGHMGEALPYWLYRLDYMHQAGV 283 (373)
T ss_dssp CEEECCCCCCTTTCHHHHHHTCSSTTTHHHHHHHHHHHHHHHHTHHH--HCTTCCEEECHHHHTTTTTHHHHHHHHHHHH
T ss_pred eEEECCCCCCccccccccccccchhhhhhHHHHHHHHHHHHHcCchh--hCcCCeEEEecccchHHHHHHHHHHHHhhcc
Confidence 99999997532110 0000 0124567788 8999999999997 687543322111
Q ss_pred ------------------hCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHH
Q 004052 284 ------------------VYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVF 345 (776)
Q Consensus 284 ------------------~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~ 345 (776)
..+|||+|+|+++. ...++.+++..|.+||||||| ||.. ... ...+
T Consensus 284 ~~~~~~~~~~l~~~pse~~~~nvy~d~sg~~~-------~~~l~~~~~~~g~drilfgSD---~P~~--~~~-~~~~--- 347 (373)
T 4inf_A 284 RSQRYERMKPLKKTIEGYLKSNVLVTNSGVAW-------EPAIKFCQQVMGEDRVMYAMD---YPYQ--YVA-DEVR--- 347 (373)
T ss_dssp HHTCCTTCCCCSSCHHHHHHHTEEEECTTCCC-------HHHHHHHHHHHCGGGEECCCC---TTTT--CCH-HHHH---
T ss_pred ccccccccccccCCHHHHHhcCeEEeeccccc-------HHHHHHHHHHcCcceEEEecC---CCCC--ccH-HHHH---
Confidence 13699999998753 246788889999999999999 7732 222 1112
Q ss_pred HHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCC
Q 004052 346 SVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (776)
Q Consensus 346 ~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (776)
+++...++ + +.+++|+++||+|||+|
T Consensus 348 -----~l~~~~l~--~--e~~~~I~~~NA~rlf~L 373 (373)
T 4inf_A 348 -----AMDAMDMS--A--QTKKKFFQTNAEKWFKL 373 (373)
T ss_dssp -----HHHTCSCC--H--HHHHHHHTHHHHHHTTC
T ss_pred -----HHHhCCCC--H--HHHHHHHhHHHHHHhCc
Confidence 22222455 3 67999999999999986
No 19
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=99.70 E-value=1.3e-17 Score=182.91 Aligned_cols=191 Identities=17% Similarity=0.202 Sum_probs=131.1
Q ss_pred HHHHHHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CCchhhhhHHHHHHHHHHhhCCC
Q 004052 155 FLKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----ITNKSLIDYIFISSLEVAQFLDL 228 (776)
Q Consensus 155 l~~~l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~----~~~~~l~d~~l~~l~e~a~e~gl 228 (776)
+.+.++.+++++.||.+ +++. +++++.++++|++++ + ++.+ .....++|..+.|+|+.|+++|+
T Consensus 118 l~~~~~~~P~Rf~g~a~---------v~~~-~~~~a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~ 187 (357)
T 3nur_A 118 LANYIAQYPNRFVGFAT---------LPIN-EPEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDV 187 (357)
T ss_dssp HHHHHHHSTTTEEECBC---------CCTT-SHHHHHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTC
T ss_pred HHHHHHhCCCEEEEEEe---------CCCC-CHHHHHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCC
Confidence 34445667899999988 6554 677889999999863 2 2322 23456788899999999999999
Q ss_pred cEEEecCCCCCC-C----CcCCc----------------------ChhhhHHHHHhcCCCCcEEEEeCCC--CchHHHHH
Q 004052 229 PLQIHTGFGDKD-L----DLRLS----------------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEAS 279 (776)
Q Consensus 229 Pvq~H~G~gd~~-~----~~~~~----------------------~P~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~ 279 (776)
||++|+|.+... . ...+. .++.+.++++ |||++|||+.|+| .||..+..
T Consensus 188 pV~iH~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~~~~~~li~~gv~~--rfP~LkiilaH~Gg~~P~~~~rl 265 (357)
T 3nur_A 188 PIYLHPAPVNSDIYQSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFD--RYPKLNMIIGHWGEFIPFFLERM 265 (357)
T ss_dssp CEEEECCCCCHHHHHHHTCCSSCHHHHHHHHTTTTHHHHHHHHHHHHHHHTTHHH--HSTTCCEEECGGGTTGGGGHHHH
T ss_pred eEEEecCCCCccccccccccCcccchhhhhhhhhhchhHHHHHHHHHHHHcCchh--hCCCCeEEEecccccHHHHHHHH
Confidence 999999874210 0 00000 0134566788 8999999999997 68765443
Q ss_pred HHHH------------hCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHH
Q 004052 280 YLAY------------VYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSV 347 (776)
Q Consensus 280 ~la~------------~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~ 347 (776)
..+. ..+|||+|+|+++. ...++.+++..|.+||||||| ||... ... ..
T Consensus 266 d~~~~~~~l~~~ps~~~~~nvy~~~sg~~~-------~~~l~~~~~~~g~drilfgSD---~P~~~--~~~-~~------ 326 (357)
T 3nur_A 266 DEALFAEHLNHSVSYYFKNSFYITPSGMLT-------KPQFDLVKKEVGIDRILYAAD---YPYIE--PEK-LG------ 326 (357)
T ss_dssp HHHSCCTTSSSCHHHHHHHSEEECCTTCCC-------HHHHHHHHHHHCGGGBCBCCC---TTTCC--CTT-HH------
T ss_pred HhhhccccccCCHHHHHHhceeeecccCCC-------HHHHHHHHHHcCCceEEEeCC---CCCCC--chH-HH------
Confidence 3221 12699999998763 135778888899999999999 77322 221 11
Q ss_pred hhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 348 LRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 348 l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
++++.-.++ + +.+++|+++||+|||+|+.
T Consensus 327 --~~~~~~~l~--~--~~~~~i~~~NA~rl~~l~~ 355 (357)
T 3nur_A 327 --VFLDELGLT--D--EEKEKISYTNGAKLLGLSS 355 (357)
T ss_dssp --HHTTSSCCC--H--HHHHHHHTHHHHHHHTC--
T ss_pred --HHHHHcCCC--H--HHHHHHHhHHHHHHhCCCC
Confidence 223322355 3 6799999999999999863
No 20
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=99.67 E-value=3.6e-16 Score=164.71 Aligned_cols=180 Identities=17% Similarity=0.173 Sum_probs=128.8
Q ss_pred HHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC--CCC---cCCchhhhhHHHHHHHHHHhhC-CCcEEE
Q 004052 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG--KPV---RITNKSLIDYIFISSLEVAQFL-DLPLQI 232 (776)
Q Consensus 159 l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~--~~~---~~~~~~l~d~~l~~l~e~a~e~-glPvq~ 232 (776)
.+.++++++||.. +++....+++.+++++++... .+. .++. . ++..+.++++.|+++ |+||++
T Consensus 81 ~~~~p~~~~~~g~---------~p~~~~~~~~~~el~~~~~~~g~~gi~~~g~~~-~-~~~~~~~~~~~a~~~~~lpv~i 149 (272)
T 3cjp_A 81 IQAYPSRYVGFGN---------VPVGLSENDTNSYIEENIVNNKLVGIGELTPAS-G-QIKSLKPIFKYSMDSGSLPIWI 149 (272)
T ss_dssp HHHSTTTEEEEEC---------CCTTCCHHHHHHHHHHHTTTTTCSEEEEECCCT-T-CGGGGHHHHHHHHHTTCCCEEE
T ss_pred HHhCCCeEEEEEE---------eCCCCCcHHHHHHHHHHHHhcCceEEEecCCCC-C-ccHHHHHHHHHHHhccCCcEEE
Confidence 4456777877776 444333356778888887532 111 1122 3 667899999999999 999999
Q ss_pred ecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeecccccCCCccHHHHHHHHHHHH
Q 004052 233 HTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELL 312 (776)
Q Consensus 233 H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~l 312 (776)
|++.+. ....+..+.++++ +||+++||+.|+|.+++.+...++..++|||+|+|+.+.. ..++.++
T Consensus 150 H~~~~~-----~~~~~~~~~~~l~--~~p~l~iv~~H~G~~~~~~~~~~~~~~~~~y~~~s~~~~~-------~~~~~~~ 215 (272)
T 3cjp_A 150 HAFNPL-----VLQDIKEIAELCK--AFPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAYFST-------FVLKIVI 215 (272)
T ss_dssp CCSTTC-----CHHHHHHHHHHHH--HSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTCSCH-------HHHHHHH
T ss_pred eCCCCC-----ccccHHHHHHHHH--HCCCceEEEECCCCccHHHHHHHHHhCCCEEEEecccccH-------HHHHHHH
Confidence 998531 1224557888888 7999999999999887777777888889999999987642 3577888
Q ss_pred HHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 313 ELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 313 e~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
+..| +||||||| ||.. ....+++.+. + ..++. +.+++|+++||+|||+++.
T Consensus 216 ~~~~-dril~gSD---~P~~---~~~~~~~~~~----~----~~l~~----~~~~~i~~~Na~rl~~l~~ 266 (272)
T 3cjp_A 216 NELP-LKCIFGTD---MPFG---DLQLSIEAIK----K----MSNDS----YVANAVLGDNISRLLNIEG 266 (272)
T ss_dssp HHST-TTEECCCC---TTSS---CHHHHHHHHH----H----HCSSH----HHHHHHHTHHHHHHHTC--
T ss_pred HhCC-CeEEEeCC---CCCC---ChHHHHHHHH----h----cCCCH----HHHHHHHHHHHHHHhCccC
Confidence 8888 99999999 7732 2223333332 1 13553 6799999999999999864
No 21
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=99.65 E-value=4.6e-16 Score=167.98 Aligned_cols=186 Identities=12% Similarity=0.109 Sum_probs=125.5
Q ss_pred HHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CC------chhhhhHHHHHHHHHHhhC
Q 004052 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----IT------NKSLIDYIFISSLEVAQFL 226 (776)
Q Consensus 159 l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~----~~------~~~l~d~~l~~l~e~a~e~ 226 (776)
.+.++++++||.+ ++|. +++++.++++++++. + ++.+ .. ...+++..+.++++.|+++
T Consensus 88 ~~~~p~r~~~~~~---------v~p~-~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 157 (327)
T 2dvt_A 88 CAKRPDRFLAFAA---------LPLQ-DPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL 157 (327)
T ss_dssp HHHCTTTEEEEEC---------CCTT-SHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHH
T ss_pred HhhCCCceEEEee---------cCcC-CHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHc
Confidence 4557788888876 5554 566788899999864 2 1111 11 3467888999999999999
Q ss_pred CCcEEEecCCCCCCCC-----cC--C----c---------ChhhhHHHHHhcCCCCcEEEEeCCC--CchHHHHHHH---
Q 004052 227 DLPLQIHTGFGDKDLD-----LR--L----S---------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYL--- 281 (776)
Q Consensus 227 glPvq~H~G~gd~~~~-----~~--~----~---------~P~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~~l--- 281 (776)
|+||++|++....+.. .. . . .++.+.++++ +||+++||+.|+| +|+..+....
T Consensus 158 ~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~--~~P~l~~v~~H~gg~~p~~~~~~~~~~~ 235 (327)
T 2dvt_A 158 DVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFD--EHPRLNIILGHMGEGLPYMMWRIDHRNA 235 (327)
T ss_dssp TCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTHHHHHHHHHHTTT
T ss_pred CCeEEECCCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHh--hCCCCeEEEecccccHHHHHHHHHhhhh
Confidence 9999999975321100 00 0 0 1223557888 8999999999997 5654332221
Q ss_pred -------------HHh--CCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHH
Q 004052 282 -------------AYV--YPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFS 346 (776)
Q Consensus 282 -------------a~~--~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~ 346 (776)
+.. .+|||+|+|+.+. ...++.+++..|.+||||||| ||... .....+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~n~y~~~sg~~~-------~~~~~~~~~~~g~dril~gSD---~P~~~---~~~~~~~--- 299 (327)
T 2dvt_A 236 WVKLPPRYPAKRRFMDYFNENFHITTSGNFR-------TQTLIDAILEIGADRILFSTD---WPFEN---IDHASDW--- 299 (327)
T ss_dssp TCCSCCSSSCSSCHHHHHHHHEEEECTTCCC-------HHHHHHHHTTTCGGGEECCCC---TTTSC---HHHHHHH---
T ss_pred hccccccCCCCCCHHHHHhhcEEEeccCCCC-------HHHHHHHHHHhCcccEEEecC---CCCcc---HHHHHHH---
Confidence 112 2799999998753 346888999999999999999 77322 2111121
Q ss_pred HhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCC
Q 004052 347 VLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 347 ~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (776)
+. +-.++. +.+++|+++||+|||+|+
T Consensus 300 -~~----~~~l~~----~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 300 -FN----ATSIAE----ADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp -HH----HSSSCH----HHHHHHHTHHHHHHTTCC
T ss_pred -HH----HCCCCH----HHHHHHHHHhHHHHhCCC
Confidence 22 123553 679999999999999985
No 22
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=99.62 E-value=2e-15 Score=160.13 Aligned_cols=187 Identities=17% Similarity=0.136 Sum_probs=123.1
Q ss_pred HHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCc----CC-chhhhhHHHHHHHHHHhhCCCcEEE
Q 004052 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVR----IT-NKSLIDYIFISSLEVAQFLDLPLQI 232 (776)
Q Consensus 159 l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~----~~-~~~l~d~~l~~l~e~a~e~glPvq~ 232 (776)
++.+++++.||.. ++|... .++++++.+.+ ++.+ .. ...+++..+.++++.|+++|+||.+
T Consensus 76 ~~~~p~r~~~~~~---------v~p~~~----~~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~i 142 (288)
T 2ffi_A 76 LQTVPGQLRGVVM---------LERDVE----QATLAEMARLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVEL 142 (288)
T ss_dssp HHHSTTTBCCBBC---------CCSSCC----HHHHHHHHTTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEE
T ss_pred HHHCCCCEEEEEE---------eCCCCC----HHHHHHHHHCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEE
Confidence 3446677877765 444422 24566666533 1111 11 2467888899999999999999999
Q ss_pred ecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCch---------HHHHHHHHHhCCeeeecccccCCCccH--
Q 004052 233 HTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF---------SKEASYLAYVYPQVYLDFGLAIPKLSV-- 301 (776)
Q Consensus 233 H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~---------~~e~~~la~~~pNVyld~s~~~~~~~~-- 301 (776)
|++.. .+..+.++++ +|| ++||+.|+|.++ ..++..+ ..+||||+++|+++.....
T Consensus 143 H~~~~---------~~~~~~~~~~--~~p-l~~vi~H~g~~~~~~~~~~~~~~~~~~l-~~~~n~y~~~sg~~~~~~~~~ 209 (288)
T 2ffi_A 143 HRQVA---------DIPVLVRALQ--PYG-LDIVIDHFGRPDARRGLGQPGFAELLTL-SGRGKVWVKVSGIYRLQGSPE 209 (288)
T ss_dssp CSCTT---------THHHHHHHHT--TTT-CCEEESGGGSCCTTSCTTCTTHHHHTTC-CCCSCEEEEEECGGGSSSCHH
T ss_pred eechh---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCChhHHHHHHH-HhCCCEEEEeCcchhhccccC
Confidence 99842 3456788888 899 999999998765 3433333 3579999999987643211
Q ss_pred ---HHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHh
Q 004052 302 ---QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (776)
Q Consensus 302 ---~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (776)
......++.+++..|.+||||||| ||.........+.+.+. .+.++ .++ + +.+++|+++||+|||
T Consensus 210 ~~~~~~~~~~~~~~~~~g~drll~gSD---~P~~~~~~~~~~~~~~~-~~~~~----~~~--~--~~~~~i~~~NA~rl~ 277 (288)
T 2ffi_A 210 ENLAFARQALCALEAHYGAERLMWGSD---WPHTQHESEVSFGSAVE-QFEAL----GCS--A--QLRQALLLDTARALF 277 (288)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGEEEECC---TTCTTCTTTCCHHHHHH-HHHHH----CCC--H--HHHHHHHTHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhCCCceEEecC---CCCCCCCCCCCHHHHHH-HHHHH----CCC--H--HHHHHHHHHCHHHHh
Confidence 122357889999999999999999 66321100001122221 12222 234 2 679999999999999
Q ss_pred CCCCC
Q 004052 379 KINLG 383 (776)
Q Consensus 379 ~l~~~ 383 (776)
+++.+
T Consensus 278 ~l~~~ 282 (288)
T 2ffi_A 278 GFELE 282 (288)
T ss_dssp TCCCC
T ss_pred Ccccc
Confidence 98764
No 23
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=99.60 E-value=2.4e-15 Score=163.34 Aligned_cols=188 Identities=21% Similarity=0.265 Sum_probs=124.1
Q ss_pred HHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCC----cCCchhhhhHHHHHHHHHHhhCCCcEEE
Q 004052 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPV----RITNKSLIDYIFISSLEVAQFLDLPLQI 232 (776)
Q Consensus 159 l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~----~~~~~~l~d~~l~~l~e~a~e~glPvq~ 232 (776)
.+.++++++||.+ +++. +++++.++++++++. + ++. ...+..++|..+.++|++|+++|+||.+
T Consensus 104 ~~~~p~r~~~~~~---------l~~~-~~~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~i 173 (336)
T 2wm1_A 104 VVSYPRRFVGLGT---------LPMQ-APELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFV 173 (336)
T ss_dssp HHHSTTTEEEEEC---------CCTT-SHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEE
T ss_pred HHhccCceeEEEe---------CCCc-CHHHHHHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEE
Confidence 3457788988877 5554 567788999999964 2 222 1234567888999999999999999999
Q ss_pred ecCCCCCCCCcC-CcCh---------------hhhHHHHHhcCCCCcEEEEeCCC--CchHHHHH--------HHH----
Q 004052 233 HTGFGDKDLDLR-LSNP---------------LHLRAILEDKRFSKCRFVLLHAS--YPFSKEAS--------YLA---- 282 (776)
Q Consensus 233 H~G~gd~~~~~~-~~~P---------------~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~--------~la---- 282 (776)
|++....+..+. +..| +.+.++++ +||+++||+.|+| .|+..+.. .++
T Consensus 174 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~--~~P~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~l 251 (336)
T 2wm1_A 174 HPWDMQMDGRMAKYWLPWLVGMPAETTIAICSMIMGGVFE--KFPKLKVCFAHGGGAFPFTVGRISHGFSMRPDLCAQDN 251 (336)
T ss_dssp ECCSCCCSGGGSSTTHHHHTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHSSSC
T ss_pred CCCCCCccccccccchHHHhccHHHHHHHHHHHHHcCchh--hCCCCeEehhcccchHHHHHHHHHhhhhhChhhhhccC
Confidence 998542111111 1111 23667888 8999999999997 56543221 221
Q ss_pred -----HhCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCC
Q 004052 283 -----YVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDL 357 (776)
Q Consensus 283 -----~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l 357 (776)
..+.|+|+|++ .+. ...++.+++..|.+||||||| ||.. .......+.+ .+. ..+
T Consensus 252 ~~~p~~~~~~~~~ds~-~~~-------~~~l~~~i~~~g~drilfGSD---~P~~--~~~~~~~~~l----~~~---~~l 311 (336)
T 2wm1_A 252 PMNPKKYLGSFYTDAL-VHD-------PLSLKLLTDVIGKDKVILGTD---YPFP--LGELEPGKLI----ESM---EEF 311 (336)
T ss_dssp CSCGGGGTTSSEEECC-CCS-------HHHHHHHHHHHCTTSEECCCC---BTST--TSCSSTTHHH----HTC---TTS
T ss_pred CCCHHHHHHhhEEEec-ccC-------HHHHHHHHHHhCCccEEEeCC---CCCC--cCCcCHHHHH----Hhc---cCC
Confidence 23359999954 331 346788888999999999999 6631 1111011222 110 245
Q ss_pred ChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 358 SVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 358 ~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
+. +.+++|+++||+|||+++.
T Consensus 312 ~~----~~~~~i~~~NA~rl~~l~~ 332 (336)
T 2wm1_A 312 DE----ETKNKLKAGNALAFLGLER 332 (336)
T ss_dssp CH----HHHHHHHTHHHHHHHTCCC
T ss_pred CH----HHHHHHHHHHHHHHhCcCc
Confidence 53 6799999999999999864
No 24
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=99.60 E-value=2.3e-15 Score=160.96 Aligned_cols=189 Identities=16% Similarity=0.196 Sum_probs=124.2
Q ss_pred HHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCcC----CchhhhhHHHHHHHHHHhhCCCcEEE
Q 004052 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPLQI 232 (776)
Q Consensus 159 l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~~----~~~~l~d~~l~~l~e~a~e~glPvq~ 232 (776)
.+.+++++.||.. +++. +++++.++++++++. + .+..+ ....+++..+.++++.|+++|+||++
T Consensus 84 ~~~~p~r~~~~~~---------~p~~-~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~i 153 (307)
T 2f6k_A 84 AQQYPDQLGYLAS---------LPIP-YELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVAL 153 (307)
T ss_dssp HHHCTTTEEEEEC---------CCTT-CHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEE
T ss_pred HHhCccceeEEEe---------CCCC-CHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEE
Confidence 3456788888776 4322 467788899999864 2 22111 12356778899999999999999999
Q ss_pred ecCCCCCCC-CcCCcChh----------------hhHHHHHhcCCCCcEEEEeCCCC--chHHHH----------HHHHH
Q 004052 233 HTGFGDKDL-DLRLSNPL----------------HLRAILEDKRFSKCRFVLLHASY--PFSKEA----------SYLAY 283 (776)
Q Consensus 233 H~G~gd~~~-~~~~~~P~----------------~L~~l~~~~~~P~l~ivl~H~g~--p~~~e~----------~~la~ 283 (776)
|++....+. ......|. .+.++++ +||+++||+.|+|. |+..+. ..+..
T Consensus 154 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~P~l~~v~~H~gg~~p~~~~~~~~~~~~~~~~~~~~ 231 (307)
T 2f6k_A 154 HPNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFE--KYPNIKVIIPHAGAFLGIVDDRIAQYAQKVYQVDVYD 231 (307)
T ss_dssp ECCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHH--HCTTCEEEESGGGTTHHHHHHHHHHHHHHHHCCCHHH
T ss_pred CCCCCccccccccccccchhccchHHHHHHHHHHHhcCccc--cCCCCeEEccCCCccchhhHHHHHhhccccCcccHHH
Confidence 998643210 01111111 2346888 79999999999974 544321 12344
Q ss_pred hCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHH
Q 004052 284 VYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAI 363 (776)
Q Consensus 284 ~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~ 363 (776)
.++|||+|+|++.. ...++.+++..|.+||||||| ||.. .....++.+.. +.+ -..++.
T Consensus 232 ~~~n~y~~~s~~~~-------~~~l~~~~~~~g~drll~gSD---~P~~---~~~~~~~~~~~-l~~---~~~l~~---- 290 (307)
T 2f6k_A 232 VMHHVYFDVAGAVL-------PRQLPTLMSLAQPEHLLYGSD---IPYT---PLDGSRQLGHA-LAT---TDLLTN---- 290 (307)
T ss_dssp HHHHSEEECCSSCT-------TTHHHHHTTTSCGGGEECCCC---TTTS---CHHHHHHHHHH-HHH---CTTSCH----
T ss_pred HHhheEEeccCCCC-------HHHHHHHHHhcCcccEEEecC---CCCC---CchhHHHHHHH-Hhh---ccCCCH----
Confidence 55799999998753 235788889999999999999 6732 12222222221 111 124553
Q ss_pred HHHHHHHHHhHHHHhCC
Q 004052 364 EVAKDIFALNAAQFYKI 380 (776)
Q Consensus 364 ~~~~~Il~~NA~rly~l 380 (776)
+.+++|+++||+|||++
T Consensus 291 ~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 291 EQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHHHHHTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 67999999999999975
No 25
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=99.59 E-value=4.5e-15 Score=161.21 Aligned_cols=186 Identities=18% Similarity=0.265 Sum_probs=122.7
Q ss_pred HHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCC----cCCchhhhhHHHHHHHHHHhhCCCcEEEe
Q 004052 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPV----RITNKSLIDYIFISSLEVAQFLDLPLQIH 233 (776)
Q Consensus 159 l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~----~~~~~~l~d~~l~~l~e~a~e~glPvq~H 233 (776)
.+.++++++||.+ +++. +++++.+++++++..+ ++. ...+..++|..+.++|+.|+++|+||.+|
T Consensus 108 ~~~~p~r~~~~~~---------l~~~-~~~~a~~el~~~~~~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH 177 (334)
T 2hbv_A 108 AAHNPQRIKVLAQ---------VPLQ-DLDLACKEASRAVAAGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVH 177 (334)
T ss_dssp HTTCTTTEEECBC---------CCTT-SHHHHHHHHHHHHHHTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred HhhCCCeEEEEEe---------cCcc-CHHHHHHHHHHHHHcCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEEC
Confidence 3456788888876 5554 5667888899988533 221 22345678999999999999999999999
Q ss_pred cCCCCCCCCcC-Cc------Ch---------hhhHHHHHhcCCCC-cEEEEeCCC--CchHHHHHH-------H------
Q 004052 234 TGFGDKDLDLR-LS------NP---------LHLRAILEDKRFSK-CRFVLLHAS--YPFSKEASY-------L------ 281 (776)
Q Consensus 234 ~G~gd~~~~~~-~~------~P---------~~L~~l~~~~~~P~-l~ivl~H~g--~p~~~e~~~-------l------ 281 (776)
++....+..+. +. .| +.+.++++ +||+ ++||+.|+| .|+..+... +
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~v~~--~~P~~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~~ 255 (334)
T 2hbv_A 178 PWDMMGGQRMKKWMLPWLVAMPAETQLAILSLILSGAFE--RIPKSLKICFGHGGGSFAFLLGRVDNAWRHRDIVREDCP 255 (334)
T ss_dssp CCSCSCTTTTCSTTHHHHTHHHHHHHHHHHHHHHTTGGG--TSCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHTTCC
T ss_pred CCCCCCCcchhhhhhhhhhhcHHHHHHHHHHHHHcCchh--hCCCcceEEeecccchHHHHHHHHHhhhhcccccccccC
Confidence 98642111111 11 12 23566777 8999 999999997 354432211 1
Q ss_pred ---HHhCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCC
Q 004052 282 ---AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLS 358 (776)
Q Consensus 282 ---a~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~ 358 (776)
...++|+|+|++ .+. ...++.+++..|.+||||||| ||.. ....... +.++...++
T Consensus 256 ~~~~~~~~~~y~ds~-~~~-------~~~l~~~~~~~g~drilfGSD---~P~~--~~~~~~~--------~~l~~~~l~ 314 (334)
T 2hbv_A 256 RPPSEYVDRFFVDSA-VFN-------PGALELLVSVMGEDRVMLGSD---YPFP--LGEQKIG--------GLVLSSNLG 314 (334)
T ss_dssp SCGGGGGGGCEEECC-CSS-------HHHHHHHHHHHCGGGEECCCC---BTST--TSCSSTT--------HHHHTSSCC
T ss_pred CCHHHHHhhhEEEec-cCC-------HHHHHHHHHHhCcccEEEeCC---CCCC--CCCcCHh--------hHhhhcCCC
Confidence 112359999954 331 346888888889999999999 6632 1111001 111223455
Q ss_pred hhhHHHHHHHHHHHhHHHHhCCC
Q 004052 359 VGEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~l~ 381 (776)
. +.+++|+++||+|||+++
T Consensus 315 ~----~~~~~i~~~NA~rl~~l~ 333 (334)
T 2hbv_A 315 E----SAKDKIISGNASKFFNIN 333 (334)
T ss_dssp H----HHHHHHHTHHHHHHHTCC
T ss_pred H----HHHHHHHhHHHHHHhCCC
Confidence 3 679999999999999985
No 26
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=99.58 E-value=4.8e-15 Score=158.25 Aligned_cols=185 Identities=13% Similarity=0.106 Sum_probs=121.7
Q ss_pred HhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC-----CchhhhhHHHHHHHHHHhhCCCcEEEe
Q 004052 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI-----TNKSLIDYIFISSLEVAQFLDLPLQIH 233 (776)
Q Consensus 160 ~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~~-----~~~~l~d~~l~~l~e~a~e~glPvq~H 233 (776)
+.++++++||.. +.|..+. ++++++.+.+ ++.++ ..+.+++..+.++++.|+++|+||++|
T Consensus 90 ~~~p~r~~g~~~---------v~P~~~~----~eL~~l~~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH 156 (294)
T 4i6k_A 90 QQYPDRLKGIAV---------VQHTTTF----NELVNLKAQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELH 156 (294)
T ss_dssp HHSTTTEEEEEC---------CCTTCCH----HHHHHHHTTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHCCCeEEEEEE---------eCCcccH----HHHHHHHHCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEe
Confidence 446777877765 4444322 3456655432 11111 123467789999999999999999999
Q ss_pred cCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCc---------hHHHHHHHHHhCCeeeecccccCCCcc----
Q 004052 234 TGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEASYLAYVYPQVYLDFGLAIPKLS---- 300 (776)
Q Consensus 234 ~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p---------~~~e~~~la~~~pNVyld~s~~~~~~~---- 300 (776)
++.. .+..+.++++ ++| ++||+.|+|.| |.+++..++ .+||||+++|+.+....
T Consensus 157 ~~~~---------~l~~~~~~l~--~~p-~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~-~~~nv~~k~Sg~~~~~~~~~~ 223 (294)
T 4i6k_A 157 APPK---------YLVQLLPQLN--EYS-FDVVIDHFGRVDPVKGIEDPDYQKFLSLL-NVKQHWIKVSGFYRLGATPSN 223 (294)
T ss_dssp CCHH---------HHHHHHHHHT--TSS-SCEEESGGGCCCTTTCTTCHHHHHHHHHC-CTTTEEEECCCGGGSSSTTHH
T ss_pred eCcc---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCCHHHHHHHHHH-hCCCEEEEecccccccccCCC
Confidence 9731 2335667777 899 99999999876 455555665 57999999999865321
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCC
Q 004052 301 VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (776)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (776)
.......++++++..|.+|+||||| ||.........+.+.+ +.+.++ .++ + +.+++|+++||+|||++
T Consensus 224 ~~~~~~~l~~~~~~~g~dRll~gSD---~P~~~~~~~~~y~~~~-~~l~~~----~~~--~--~~~~~i~~~NA~rl~~l 291 (294)
T 4i6k_A 224 INIAQQAYNIFKEKGFLHKLIWGSD---WPHTQHESLITYEDAI-KAFKQI----VFD--K--HEQCLILNQNPTELFGF 291 (294)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECCCC---BTCTTCTTTCCHHHHH-HHHHHH----CCC--H--HHHHHHHTHHHHHHHTC
T ss_pred chhhHHHHHHHHHHhCcccEEEeCC---CCCCCCcCCCCHHHHH-HHHHHH----CCC--H--HHHHHHHHHCHHHHhCC
Confidence 0122457889999999999999999 6643211100112222 223333 244 2 67999999999999998
Q ss_pred CC
Q 004052 381 NL 382 (776)
Q Consensus 381 ~~ 382 (776)
+.
T Consensus 292 ~~ 293 (294)
T 4i6k_A 292 SR 293 (294)
T ss_dssp --
T ss_pred CC
Confidence 53
No 27
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=99.58 E-value=1.7e-15 Score=162.45 Aligned_cols=187 Identities=15% Similarity=0.139 Sum_probs=127.3
Q ss_pred HHHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCcCC-----chhhhhHHHHHHHHHHhhCCCcEE
Q 004052 158 QLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRIT-----NKSLIDYIFISSLEVAQFLDLPLQ 231 (776)
Q Consensus 158 ~l~~~~~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~~~-----~~~l~d~~l~~l~e~a~e~glPvq 231 (776)
.++.++++++||.. ++|..+. ++++++.+.+ ++.++. ...+.+..+.++++.|++ ||+++
T Consensus 89 ~l~~~~~r~~Gva~---------vdp~~~~----~eL~~l~~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~ 154 (303)
T 4d9a_A 89 AIARAQGKARGIAV---------VDPAIDE----AELAALHEGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVV 154 (303)
T ss_dssp HHHHTTTSEEEEEC---------CCTTCCH----HHHHHHHHTTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEE
T ss_pred HHHhCCCcEEEEEE---------eCCCCCH----HHHHHHHHCCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEE
Confidence 34556788888876 4444332 4555555433 222211 245788899999999999 99999
Q ss_pred EecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCc---------hHHHHHHHHHhCCeeeecccccCCCc---
Q 004052 232 IHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEASYLAYVYPQVYLDFGLAIPKL--- 299 (776)
Q Consensus 232 ~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p---------~~~e~~~la~~~pNVyld~s~~~~~~--- 299 (776)
+|++.. .+..+..+++ +| +++||+.|+|.| +++++..++..+||||+++|+++...
T Consensus 155 l~~~~~---------~l~~l~~~~~--~~-~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~~NV~vKlSg~~~~~~~~ 222 (303)
T 4d9a_A 155 IYFEAD---------ILEELRPFMD--AI-PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSREDIWFKATCPDRLDPAG 222 (303)
T ss_dssp EECCGG---------GHHHHHHHHH--HC-SSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCTTEEEECCCHHHHCTTC
T ss_pred Eecccc---------cHHHHHHHHH--HC-CCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhCCCEEEEeeCceecCCCC
Confidence 999732 3446778888 79 899999999864 56777888989999999999875211
Q ss_pred -cHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhh-HHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHH
Q 004052 300 -SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGA-KRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (776)
Q Consensus 300 -~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~-~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rl 377 (776)
........++.+++.+ .+|+||||| ||.+..... ..+...+. .+.++ ++ ++ +.+++|+++||+||
T Consensus 223 ~~~~~~~~~~~~~~~~~-~dRlmfGSD---wP~~~~~~~~~~~~~~~~-~~~~~-----~~-~~--~~~~~il~~NA~rl 289 (303)
T 4d9a_A 223 PPWDDFARSVAPLVADY-ADRVIWGTA---WPHPNMQDAIPDDGLVVD-MIPRI-----AP-TP--ELQHKMLVTNPMRL 289 (303)
T ss_dssp TTCHHHHHHHHHHHHHT-TTSEECCCC---TTCTTCTTSCCCHHHHHH-THHHH-----SC-SH--HHHHHHHTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-cccEEEecC---CCCcccccCCCCHHHHHH-HHHHH-----CC-CH--HHHHHHHHHHHHHH
Confidence 1224566888999998 799999999 775432211 01222221 11121 32 22 68999999999999
Q ss_pred hCCCCC
Q 004052 378 YKINLG 383 (776)
Q Consensus 378 y~l~~~ 383 (776)
|+++..
T Consensus 290 y~~~~~ 295 (303)
T 4d9a_A 290 YWSEEM 295 (303)
T ss_dssp HCGGGC
T ss_pred hCCCcc
Confidence 998643
No 28
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=99.57 E-value=1.1e-14 Score=156.22 Aligned_cols=151 Identities=17% Similarity=0.165 Sum_probs=107.6
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchH--------------
Q 004052 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFS-------------- 275 (776)
Q Consensus 210 ~l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~-------------- 275 (776)
.+++..+.++++.|+++|+|+++|++. ..+..+..+++ +||+++||+.|+|.|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~glpv~ih~~~---------~~l~~l~~ll~--~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~ 186 (303)
T 4do7_A 118 FVDDADFARGVAWLQANDYVYDVLVFE---------RQLPDVQAFCA--RHDAHWLVLDHAGKPALAEFDRDDTALARWR 186 (303)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEECCCG---------GGHHHHHHHHH--HCCSSCEEEGGGGCCCGGGCC---CHHHHHH
T ss_pred cccCHHHHHHHHHHHHCCCeEEEecCH---------HHHHHHHHHHH--HCCCCCEEEeCCCCCCccccccccchHHHHH
Confidence 478889999999999999999999973 23456788888 89999999999998742
Q ss_pred HHHHHHHHhCCeeeecccccCCCcc---------HHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhh-HHHHHHHH
Q 004052 276 KEASYLAYVYPQVYLDFGLAIPKLS---------VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGA-KRAREVVF 345 (776)
Q Consensus 276 ~e~~~la~~~pNVyld~s~~~~~~~---------~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~-~~~r~~l~ 345 (776)
..+..|+ .+||||+++|+++.... .+.....++.+++..|.+||||||| ||....... ....+.+
T Consensus 187 ~~l~~la-~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD---~P~~~~~~~~~~~~~~~- 261 (303)
T 4do7_A 187 AALRELA-ALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSD---WPVCLLAASYDEVASLV- 261 (303)
T ss_dssp HHHHHHH-TSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCC---BTGGGGTCCHHHHHHHH-
T ss_pred HHHHHHH-hCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCC---CCCCcCcCCHHHHHHHH-
Confidence 2344555 78999999998864321 1233457889999999999999999 784321111 1122222
Q ss_pred HHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCCCc
Q 004052 346 SVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (776)
Q Consensus 346 ~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (776)
.+|+. ..++. +.+++|+++||+|||+++.+.
T Consensus 262 ---~~~~~-~~l~~----~~~~~i~~~Na~rl~~l~~~~ 292 (303)
T 4do7_A 262 ---ERWAE-SRLSA----AERSALWGGTAARCYALPEPA 292 (303)
T ss_dssp ---HHHHH-HHCCH----HHHHHHTTHHHHHHTTCC---
T ss_pred ---HHHHh-cCCCH----HHHHHHHHHHHHHHhCCCCcc
Confidence 22111 12553 679999999999999997553
No 29
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=99.54 E-value=1.4e-14 Score=158.44 Aligned_cols=191 Identities=17% Similarity=0.257 Sum_probs=122.3
Q ss_pred HHHHhhccccccceeeecccCCCCCCCC--CCHHHHHHHHHHHHhC-C-CCCcC---------CchhhhhHHHHHHHHHH
Q 004052 157 KQLRSAANKIVGLKSIAAYRSGLEINPH--VTKKDAEEGLAEDLRS-G-KPVRI---------TNKSLIDYIFISSLEVA 223 (776)
Q Consensus 157 ~~l~~~~~~~vGfksv~~y~~Gl~~~~~--~~~~ea~~~~~r~l~~-~-~~~~~---------~~~~l~d~~l~~l~e~a 223 (776)
+..+.++++++||.+ +++. .+++++.++++++++. + .+.++ ....++|..+.++|+.|
T Consensus 98 ~~~~~~p~rf~~~~~---------~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a 168 (350)
T 2gwg_A 98 RVSQLFPDNFIGAAM---------LPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKM 168 (350)
T ss_dssp HHHHHSTTTEEEEEE---------CCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHH
T ss_pred HHHHhCCCcEEEEEe---------CCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHH
Confidence 334457888999887 3322 1345678889999853 2 11111 12458889999999999
Q ss_pred hhCCCcEEEecCCCCC-C---CCcCCcCh-------hhhHHHHHhcCCCCcEEEEeCCC--CchHHH---H-HH-H----
Q 004052 224 QFLDLPLQIHTGFGDK-D---LDLRLSNP-------LHLRAILEDKRFSKCRFVLLHAS--YPFSKE---A-SY-L---- 281 (776)
Q Consensus 224 ~e~glPvq~H~G~gd~-~---~~~~~~~P-------~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e---~-~~-l---- 281 (776)
+++|+||++|++.... . ....+..+ +.+.++++ +||+++||+.|+| .|+... . .. +
T Consensus 169 ~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~--~~P~l~~vi~H~Gg~~p~~~~r~~~~~~~~~~~~ 246 (350)
T 2gwg_A 169 VELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFK--DFPELKFVIPHGGGAVPYHWGRFRGLAQEMKKPL 246 (350)
T ss_dssp HHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHH--HCTTCCEEESGGGTTTGGGHHHHHHHHHHTTCCC
T ss_pred HHcCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccc--cCCCCcEEeccCCCcchhhHHHHHHHHHhccCCC
Confidence 9999999999986421 0 01111112 12346778 8999999999996 566532 1 11 1
Q ss_pred --HHhCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccc---hh--h--HHHHHHHHHHhhhhh
Q 004052 282 --AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF---LG--A--KRAREVVFSVLRDTC 352 (776)
Q Consensus 282 --a~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~---~~--~--~~~r~~l~~~l~~~v 352 (776)
...++|||+|+|+.. . ..++.+++..|.+||||||| ||...- +. . ....+.+ .+ +
T Consensus 247 l~~~~~~n~y~d~s~~~----~----~~l~~l~~~~g~dril~gSD---~P~~~~~~~p~~~~~~~~~~~~l----~~-~ 310 (350)
T 2gwg_A 247 LEDHVLNNIFFDTCVYH----Q----PGIDLLNTVIPVDNVLFASE---MIGAVRGIDPRTGFYYDDTKRYI----EA-S 310 (350)
T ss_dssp HHHHTTTTEEEECCCCS----H----HHHHHHHHHSCGGGEECCCC---CSSSCCCEETTTTEETTCTHHHH----HH-C
T ss_pred cHHHHhhcEEEEecccC----c----HHHHHHHHHhCcccEEEecC---CCCCcccCCcccccchhhHHHHH----Hh-c
Confidence 346699999999732 1 35788899999999999999 552100 00 0 0111222 11 1
Q ss_pred ccCCCChhhHHHHHHHHHHHhHHHHhCC
Q 004052 353 IDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (776)
Q Consensus 353 ~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (776)
..++. +.+++|+++||+|||++
T Consensus 311 --~~l~~----~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 311 --TILTP----EEKQQIYEGNARRVYPR 332 (350)
T ss_dssp --SSSCH----HHHHHHHTHHHHHHCHH
T ss_pred --cCCCH----HHHHHHHHHHHHHHHHh
Confidence 23553 67999999999999975
No 30
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=99.52 E-value=1.3e-14 Score=162.13 Aligned_cols=192 Identities=16% Similarity=0.149 Sum_probs=122.0
Q ss_pred HHHHHHHH-hhc-cccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC---------CchhhhhHHHHHHH
Q 004052 153 ETFLKQLR-SAA-NKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI---------TNKSLIDYIFISSL 220 (776)
Q Consensus 153 ~al~~~l~-~~~-~~~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~~---------~~~~l~d~~l~~l~ 220 (776)
+.+.+.++ .++ +|+.||.+ +++. +++.+.++++|+++.| ++..+ ....++|..+.|+|
T Consensus 148 d~lae~~~~~~P~~Rf~g~a~---------v~~~-d~~~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~ 217 (423)
T 4dzi_A 148 LWLDEDWGFDRPDHRIIAAPI---------VSLA-DPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVW 217 (423)
T ss_dssp HHHHHHTCSSCTTCCEEECCB---------CCCS-SHHHHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHH
T ss_pred HHHHHHHHhhCCCCcEEEEEe---------CCcc-CHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHH
Confidence 34444555 577 89999987 5543 6888999999999854 22222 24668899999999
Q ss_pred HHHhhCCCcEEEecCCCCCC----------CCcCCc--Ch-----------------hhhHHHHHhcCCCCcEEEEeCCC
Q 004052 221 EVAQFLDLPLQIHTGFGDKD----------LDLRLS--NP-----------------LHLRAILEDKRFSKCRFVLLHAS 271 (776)
Q Consensus 221 e~a~e~glPvq~H~G~gd~~----------~~~~~~--~P-----------------~~L~~l~~~~~~P~l~ivl~H~g 271 (776)
+.|+++|+||++|+|.+... ....+. .| +.+.++++ |||++|||+.|+|
T Consensus 218 ~~~~elg~pV~iH~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Li~sGvf~--RfP~Lkiil~h~G 295 (423)
T 4dzi_A 218 ARLAEAGVPVGFHLSDSGYLHIAAAWGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFT--RHPKLKAVSIENG 295 (423)
T ss_dssp HHHHHHTCCEEEECCCCSTHHHHHHTTCC-------CCCHHHHHHHTTHHHHHHHHHHHHTTHHH--HCTTCCEEEESSC
T ss_pred HHHHhcCCeEEEeCCCCCccccccccccccccccccccchhHHHhccchHHHHHHHHHHHcCchh--hCCCCeEEEeCCC
Confidence 99999999999999864210 001111 11 12345677 8999999999998
Q ss_pred Cch---HHHHHH-HHHh-------------CCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccc
Q 004052 272 YPF---SKEASY-LAYV-------------YPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF 334 (776)
Q Consensus 272 ~p~---~~e~~~-la~~-------------~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~ 334 (776)
..| ..+... .... ..|+|+++ +. ...++.+++..|.+||||||| ||..
T Consensus 296 g~wlP~~l~Rld~~~~~~~~~~~~~Pse~~r~n~y~t~---~~-------~~~l~~~~~~~G~drilfgSD---yP~~-- 360 (423)
T 4dzi_A 296 SYFVHRLIKRLKKAANTQPQYFPEDPVEQLRNNVWIAP---YY-------EDDLPELARVIGVDKILFGSD---WPHG-- 360 (423)
T ss_dssp STHHHHHHHHHHHHHHHCGGGCSSCHHHHHHHHEEECC---CT-------TSCHHHHHHHHCGGGBCCCCC---BTST--
T ss_pred cchHHHHHHHHHHHHHhCccccCCCHHHHHhhCeEEee---cC-------hHHHHHHHHHcCcceEEEecC---CCCc--
Confidence 544 322111 1111 13788863 21 123577888889999999999 7732
Q ss_pred hhhHHHHHHHHHHhhhhhcc-CCCChhhHHHHHHHHHHHhHHHHhCCCCC
Q 004052 335 LGAKRAREVVFSVLRDTCID-EDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (776)
Q Consensus 335 ~~~~~~r~~l~~~l~~~v~~-g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (776)
...... .+++++ ..++. +.+++|+++||+|||+|+..
T Consensus 361 ~~~~~~--------~~~~~~l~~l~~----~~~~~I~~~NA~rl~~l~~~ 398 (423)
T 4dzi_A 361 EGLASP--------VSFTAELKGFSE----SDIRKIMRDNALDLLGVQVG 398 (423)
T ss_dssp TSCSSG--------GGGGGGCTTSCH----HHHHHHHTHHHHHHHC----
T ss_pred cCccCH--------HHHHHHhcCCCH----HHHHHHHHHHHHHHHCCCcc
Confidence 111000 122222 24553 67999999999999999754
No 31
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=99.25 E-value=1.8e-11 Score=127.68 Aligned_cols=144 Identities=18% Similarity=0.199 Sum_probs=96.5
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCC--CcEEEEeCCCCchHHHHHHHHHhCC
Q 004052 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (776)
Q Consensus 209 ~~l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~ivl~H~g~p~~~e~~~la~~~p 286 (776)
..+++..+.+++++|+++|+||.+|++.. +..+.++++ ++| ++++|+ |++.....++..+. .++
T Consensus 104 ~~~~~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~--~~p~~~~~~i~-H~~~g~~~~~~~~l-~~~ 169 (265)
T 2gzx_A 104 ADVQKEVFRKQIALAKRLKLPIIIHNREA----------TQDCIDILL--EEHAEEVGGIM-HSFSGSPEIADIVT-NKL 169 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--HTTGGGTCEEE-TTCCSCHHHHHHHH-HTS
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeccc----------HHHHHHHHH--hcCCCCCcEEE-EcCCCCHHHHHHHH-HHC
Confidence 46678889999999999999999999732 335667888 799 899985 55333444455555 368
Q ss_pred eeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccch-------hhHHHHHHHHHHhhhhhccCCCCh
Q 004052 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFL-------GAKRAREVVFSVLRDTCIDEDLSV 359 (776)
Q Consensus 287 NVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~-------~~~~~r~~l~~~l~~~v~~g~l~~ 359 (776)
|||+++|++..... ...++++++..|.+||||||| +|..... ...+.+..+. .+.++ ..++.
T Consensus 170 ~~y~~~sg~~~~~~----~~~~~~~i~~~~~dril~gSD---~P~~~~~~~~g~~~~~~~~~~~~~-~l~~~---~~~~~ 238 (265)
T 2gzx_A 170 NFYISLGGPVTFKN----AKQPKEVAKHVSMERLLVETD---APYLSPHPYRGKRNEPARVTLVAE-QIAEL---KGLSY 238 (265)
T ss_dssp CCEEEECGGGGCSS----CCHHHHHHHHSCTTTEEECCC---TTSCCCTTCTTSCCCGGGHHHHHH-HHHHH---TTCCH
T ss_pred CceEEecceeecCC----cHHHHHHHHhCChhhEEEccC---CCCCCCcccCCCCCChHHHHHHHH-HHHHH---hCCCH
Confidence 99999998754321 125778889999999999999 4422100 0112222221 11111 24553
Q ss_pred hhHHHHHHHHHHHhHHHHhCCC
Q 004052 360 GEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 360 ~ea~~~~~~Il~~NA~rly~l~ 381 (776)
+.+++|+++||+|+|++.
T Consensus 239 ----~~~~~i~~~Na~rl~~~~ 256 (265)
T 2gzx_A 239 ----EEVCEQTTKNAEKLFNLN 256 (265)
T ss_dssp ----HHHHHHHHHHHHHHHC--
T ss_pred ----HHHHHHHHHHHHHHhCCc
Confidence 679999999999999985
No 32
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=99.22 E-value=2.1e-11 Score=128.19 Aligned_cols=146 Identities=20% Similarity=0.181 Sum_probs=98.9
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCC--CcEEEEeCCCCchHHHHHHHHHhCC
Q 004052 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (776)
Q Consensus 209 ~~l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~ivl~H~g~p~~~e~~~la~~~p 286 (776)
..+++..|.+.+++|+++|+||.+|++. .+..+.++++ ++| ++++|+ |+...+...+..++. .
T Consensus 115 ~~~q~~~f~~~~~~a~~~~lPv~iH~~~----------~~~~~~~il~--~~p~~~~~~I~-H~~~g~~~~~~~~~~--~ 179 (268)
T 1j6o_A 115 AEVQKRVFVEQIELAGKLNLPLVVHIRD----------AYSEAYEILR--TESLPEKRGVI-HAFSSDYEWAKKFID--L 179 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEES----------CHHHHHHHHH--HSCCCSSCEEE-TTCCSCHHHHHHHHH--H
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEeCc----------hHHHHHHHHH--hcCCCCCCEEE-EcCCCCHHHHHHHHH--C
Confidence 4667888999999999999999999973 2344566777 688 999999 985445444555554 3
Q ss_pred eeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchh----hHHHHHHHHHHhhhhhccCCCChhhH
Q 004052 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEA 362 (776)
Q Consensus 287 NVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~----~~~~r~~l~~~l~~~v~~g~l~~~ea 362 (776)
|+|+++|++..... ...++++++..|.+||||+||++..+...+.+ ..++.+.+.. +.+. ..++.
T Consensus 180 g~y~~~sg~~~~~~----~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~~-la~~---~~~~~--- 248 (268)
T 1j6o_A 180 GFLLGIGGPVTYPK----NEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVET-ISQV---LGVPE--- 248 (268)
T ss_dssp TEEEEECGGGGCTT----CHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHH-HHHH---HTSCH---
T ss_pred CCeEEecccccccc----hHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHHH-HHHH---hCcCH---
Confidence 99999998764321 23578888999999999999943221100000 1122333221 1110 13553
Q ss_pred HHHHHHHHHHhHHHHhCCC
Q 004052 363 IEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~ 381 (776)
+.+++|+++||+|+|++.
T Consensus 249 -e~~~~i~~~Na~rlf~l~ 266 (268)
T 1j6o_A 249 -AKVDEATTENARRIFLEV 266 (268)
T ss_dssp -HHHHHHHHHHHHHHHHSC
T ss_pred -HHHHHHHHHHHHHHhCcc
Confidence 679999999999999974
No 33
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=99.06 E-value=2.8e-10 Score=118.70 Aligned_cols=146 Identities=21% Similarity=0.268 Sum_probs=97.6
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCee
Q 004052 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 209 ~~l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
..+++..+.+++++|+++|+||.+|++.. +..+.++++..++|++++|+ |+...+..++..++. .|+
T Consensus 106 ~~~q~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~~~~~p~~~~v~-H~~~~~~~~~~~~~~--~g~ 172 (265)
T 1yix_A 106 KVRQQESFIHHIQIGRELNKPVIVHTRDA----------RADTLAILREEKVTDCGGVL-HCFTEDRETAGKLLD--LGF 172 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHHHTTGGGTCEEE-TTCCSCHHHHHHHHT--TTC
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEecCc----------hHHHHHHHHhcCCCCCCEEE-EcCCCCHHHHHHHHH--CCc
Confidence 45677789999999999999999999731 33455666643479999987 986555555555554 399
Q ss_pred eecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccch-------hhHHHHHHHHHHhhhhhccCCCChhh
Q 004052 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFL-------GAKRAREVVFSVLRDTCIDEDLSVGE 361 (776)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~-------~~~~~r~~l~~~l~~~v~~g~l~~~e 361 (776)
|+++++.+.... ...++++++..|.+|+||||| +|..... ....+.+.+.. +.+. ..++.
T Consensus 173 ~~~~sg~~~~~~----~~~~~~~~~~~~~drll~~TD---~P~~~~~~~~g~~~~~~~l~~~~~~-l~~~---~~~~~-- 239 (265)
T 1yix_A 173 YISFSGIVTFRN----AEQLRDAARYVPLDRLLVETD---SPYLAPVPHRGKENQPAMVRDVAEY-MAVL---KGVAV-- 239 (265)
T ss_dssp EEEECGGGGSTT----CHHHHHHHHHSCGGGEEECCC---BTSCCCTTCTTSCCCGGGHHHHHHH-HHHH---HTSCH--
T ss_pred EEEECCccccCc----hHHHHHHHHhCChHHEEEecC---CCCCCCcccCCCCCchHHHHHHHHH-HHHH---hCcCH--
Confidence 999998654311 135678888999999999999 4421100 01112222221 1111 13553
Q ss_pred HHHHHHHHHHHhHHHHhCCCC
Q 004052 362 AIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 362 a~~~~~~Il~~NA~rly~l~~ 382 (776)
+.+++|+++||+|+|+++.
T Consensus 240 --~~~~~i~~~Na~rl~~l~~ 258 (265)
T 1yix_A 240 --EELAQVTTDNFARLFHIDA 258 (265)
T ss_dssp --HHHHHHHHHHHHHHTTCCG
T ss_pred --HHHHHHHHHHHHHHhCcCh
Confidence 6789999999999999854
No 34
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.94 E-value=4.2e-09 Score=109.63 Aligned_cols=145 Identities=18% Similarity=0.200 Sum_probs=90.2
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCC-CcEEEEeCCCCchHHHHHHHHHhCCee
Q 004052 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 210 ~l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P-~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
..++..|.+.+++|.++|+||.+|++.. ...+.++++ ++| ++++|+ |+.......+..+.. .|+
T Consensus 110 ~~q~~~f~~~~~~a~~~~~Pv~iH~~~a----------~~~~~~il~--~~~~~~~~i~-H~~~g~~~~~~~~~~--~g~ 174 (259)
T 1zzm_A 110 ERQQWLLDEQLKLAKRYDLPVILHSRRT----------HDKLAMHLK--RHDLPRTGVV-HGFSGSLQQAERFVQ--LGY 174 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESC----------HHHHHHHHH--HHCCTTCEEE-TTCCSCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeccc----------HHHHHHHHH--hcCCCCCEEE-EcCCCCHHHHHHHHH--CCC
Confidence 4456678899999999999999999732 223445666 343 466766 973222233333433 599
Q ss_pred eecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchh----hHHHHHHHHHHhhhhhccCCCChhhHHH
Q 004052 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (776)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~----~~~~r~~l~~~l~~~v~~g~l~~~ea~~ 364 (776)
|++++++..+- . ...++++++..|.+|||++||++..+...+.+ ..+....+.. ..+...++. +
T Consensus 175 ~i~~~g~~~~~-~---~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~----la~~~g~~~----e 242 (259)
T 1zzm_A 175 KIGVGGTITYP-R---ASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAV----LCELRREPA----D 242 (259)
T ss_dssp EEEECGGGGCT-T---TCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHH----HHHHCSSCH----H
T ss_pred EEEECceeecc-c---cHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHH----HHHHHCcCH----H
Confidence 99999875421 0 12467788889999999999954321100100 1122233222 112224664 5
Q ss_pred HHHHHHHHhHHHHhCCC
Q 004052 365 VAKDIFALNAAQFYKIN 381 (776)
Q Consensus 365 ~~~~Il~~NA~rly~l~ 381 (776)
.+.+++++||+|+|+++
T Consensus 243 ~~~~~~~~Na~rl~~l~ 259 (259)
T 1zzm_A 243 EIAQALLNNTYTLFNVP 259 (259)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 68899999999999874
No 35
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.82 E-value=7.2e-09 Score=108.16 Aligned_cols=145 Identities=17% Similarity=0.160 Sum_probs=91.9
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCC--CcEEEEeCCCCchHHHHHHHHHhCCe
Q 004052 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYPQ 287 (776)
Q Consensus 210 ~l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~ivl~H~g~p~~~e~~~la~~~pN 287 (776)
..++..|.+.+++|.++|+||.+|++.. ...+-++++ ++| ..++|+ |+.......+..++. .|
T Consensus 108 ~~q~~~f~~~l~~a~~~~lpv~iH~~~a----------~~~~~~il~--~~~~~~~~~v~-H~~~g~~~~~~~~~~--~g 172 (264)
T 1xwy_A 108 EEQERAFVAQLRIAADLNMPVFMHCRDA----------HERFMTLLE--PWLDKLPGAVL-HCFTGTREEMQACVA--HG 172 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHG--GGGGGSSCEEE-CSCCCCHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCc----------hHHHHHHHH--hcCCCCCcEEE-EccCCCHHHHHHHHH--CC
Confidence 4456678889999999999999999621 123445666 565 788877 983222333444443 39
Q ss_pred eeecccccCC-CccHHHHHHHHHHHHHHCCCCcEEEecCCCCC-cc---ccchh----hHHHHHHHHHHhhhhhccCCCC
Q 004052 288 VYLDFGLAIP-KLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PE---TYFLG----AKRAREVVFSVLRDTCIDEDLS 358 (776)
Q Consensus 288 Vyld~s~~~~-~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-P~---~~~~~----~~~~r~~l~~~l~~~v~~g~l~ 358 (776)
+|+++|++.. +- . ...++++++..|.+||||+||++.. |. ..+.+ ..++.+.+..+ . +...++
T Consensus 173 ~yi~~~g~~~~~~-~---~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~-a---~~~g~~ 244 (264)
T 1xwy_A 173 IYIGITGWVCDER-R---GLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRI-A---HWRGED 244 (264)
T ss_dssp CEEEECGGGGCTT-T---SHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHH-H---HHHTCC
T ss_pred eEEEECccccCCc-C---cHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHH-H---HHHCcC
Confidence 9999998764 21 1 2357888999999999999995431 21 00100 01233332221 1 111466
Q ss_pred hhhHHHHHHHHHHHhHHHHhCCC
Q 004052 359 VGEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~l~ 381 (776)
. +.+.+++++||+|+|+++
T Consensus 245 ~----e~~~~~~~~Na~rl~~l~ 263 (264)
T 1xwy_A 245 A----AWLAATTDANVKTLFGIA 263 (264)
T ss_dssp H----HHHHHHHHHHHHHHHCCC
T ss_pred H----HHHHHHHHHHHHHHhCcc
Confidence 4 568899999999999975
No 36
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.70 E-value=1.3e-07 Score=98.96 Aligned_cols=143 Identities=15% Similarity=0.138 Sum_probs=91.0
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeee
Q 004052 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (776)
Q Consensus 210 ~l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVy 289 (776)
..++..|.+.+++|.++|+||.+|++.. ...+-++++ ++|..++|+ |+.......+..+.. .|+|
T Consensus 122 ~~q~~~f~~~~~la~~~~lPv~iH~~~a----------~~~~~~il~--~~~~~~~v~-H~~~g~~~~~~~~~~--~g~~ 186 (272)
T 2y1h_A 122 EEQRQVLIRQIQLAKRLNLPVNVHSRSA----------GRPTINLLQ--EQGAEKVLL-HAFDGRPSVAMEGVR--AGYF 186 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECTTC----------HHHHHHHHH--HTTCCSEEE-ETCCSCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeCCc----------HHHHHHHHH--hCCCCCEEE-EccCCCHHHHHHHHH--CCCE
Confidence 3455678889999999999999999732 112346777 588788888 872112233333433 5999
Q ss_pred ecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccc--hhhHHHHHHHHHHhhhhhccCCCChhhHHHHHH
Q 004052 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF--LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAK 367 (776)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~--~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~ 367 (776)
++++++... + ..++++++..|.+|+|++||++..+.... ....++...+.. +.+. ..++. +.+.
T Consensus 187 i~~~g~~~~----~--~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~-la~~---~g~~~----e~~~ 252 (272)
T 2y1h_A 187 FSIPPSIIR----S--GQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEY-IAQV---KGISV----EEVI 252 (272)
T ss_dssp EEECGGGGT----C--HHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHH-HHHH---HTSCH----HHHH
T ss_pred EEECCcccC----c--HHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHH-HHHH---HCcCH----HHHH
Confidence 999987632 1 25788888999999999999643210000 001122222221 1111 13553 6789
Q ss_pred HHHHHhHHHHhCCC
Q 004052 368 DIFALNAAQFYKIN 381 (776)
Q Consensus 368 ~Il~~NA~rly~l~ 381 (776)
+++++|++|+|++.
T Consensus 253 ~~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 253 EVTTQNALKLFPKL 266 (272)
T ss_dssp HHHHHHHHHHSTTH
T ss_pred HHHHHHHHHHHHhH
Confidence 99999999999874
No 37
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.56 E-value=7e-07 Score=95.19 Aligned_cols=145 Identities=17% Similarity=0.176 Sum_probs=85.5
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCC-CcEEEEeCCCCchHHHHHHHHHhCCee
Q 004052 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 210 ~l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P-~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
..+...|.+.+++|.++|+||.+|++-. ...+-++++ ++| +...++.|+-.....++..+.. .|+
T Consensus 123 ~~Q~~~f~~ql~lA~~~~lPv~iH~r~a----------~~~~~~il~--~~~~~~~~~i~H~f~g~~~~~~~~l~--~g~ 188 (301)
T 2xio_A 123 DTQLKYFEKQFELSEQTKLPMFLHCRNS----------HAEFLDITK--RNRDRCVGGVVHSFDGTKEAAAALID--LDL 188 (301)
T ss_dssp HHHHHHHHHTHHHHHHHCCCEEEEEESC----------HHHHHHHHH--HTGGGSSCEEETTCCCCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCc----------hHHHHHHHH--hccCCCCcEEEEccCCCHHHHHHHHh--cCc
Confidence 3445677888999999999999999621 223445666 354 2223448982112233333332 389
Q ss_pred eecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCC----------------ccc--c-----c---hhhHHHHH
Q 004052 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS----------------PET--Y-----F---LGAKRARE 342 (776)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~----------------P~~--~-----~---~~~~~~r~ 342 (776)
|+++++.. .- . . ...++++..|.+|||++||++.. |.. . + ....+...
T Consensus 189 yi~~~g~~-~~-~-~---~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~ 262 (301)
T 2xio_A 189 YIGFNGCS-LK-T-E---ANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQ 262 (301)
T ss_dssp EEEECGGG-SS-S-H---HHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHH
T ss_pred EEEEcccc-cC-C-h---HHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHH
Confidence 99999862 11 1 1 13478889999999999996532 110 0 0 00111222
Q ss_pred HHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 343 VVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 343 ~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
.+. .+.+. ..++. +.+.+++++||+|+|++..
T Consensus 263 ~~~-~ia~l---~g~~~----e~~~~~~~~Na~rlf~~~~ 294 (301)
T 2xio_A 263 ILE-IMSAV---RDEDP----LELANTLYNNTIKVFFPVI 294 (301)
T ss_dssp HHH-HHHHH---HTCCH----HHHHHHHHHHHHHHHCCC-
T ss_pred HHH-HHHHH---HCcCH----HHHHHHHHHHHHHHhCchh
Confidence 221 22221 13564 6799999999999999753
No 38
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.38 E-value=2.7e-06 Score=89.47 Aligned_cols=147 Identities=16% Similarity=0.171 Sum_probs=86.6
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCc-hHHHHHHHHHhCCeeeecc
Q 004052 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP-FSKEASYLAYVYPQVYLDF 292 (776)
Q Consensus 214 ~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p-~~~e~~~la~~~pNVyld~ 292 (776)
..|...+++|.++|+||++|++.+. ..+ .+-.+++...+|..++++.|++++ ....+..++.. ++|+.+
T Consensus 138 ~~~~~~~~~a~~~~~pv~iH~~~~~-------~~~-~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~--G~~i~~ 207 (291)
T 1bf6_A 138 KVFIAAALAHNQTGRPISTHTSFST-------MGL-EQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDL--GAYVQF 207 (291)
T ss_dssp HHHHHHHHHHHHHCCCEEEECGGGC-------SHH-HHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHT--TCEEEE
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCC-------ChH-HHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHC--CCEEEE
Confidence 3566778999999999999997421 012 223455543577889999999653 33444445544 455544
Q ss_pred ccc--CCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc-cchh--hHH-HHHHHHHHhhhhhccCCCChhhHHHHH
Q 004052 293 GLA--IPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET-YFLG--AKR-AREVVFSVLRDTCIDEDLSVGEAIEVA 366 (776)
Q Consensus 293 s~~--~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~-~~~~--~~~-~r~~l~~~l~~~v~~g~l~~~ea~~~~ 366 (776)
+.. ............++++++.++.+|||++||++..+.. .+.+ ..+ +...+ ..+ +...++. +.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~----~~l-~~~g~~~----~~~ 278 (291)
T 1bf6_A 208 DTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFI----PQL-RQSGFSQ----ADV 278 (291)
T ss_dssp CCTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTHH----HHH-HHTTCCH----HHH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHHH----HHH-HHcCCCH----HHH
Confidence 433 1101111124478889999999999999995432100 0000 011 22222 222 2223664 568
Q ss_pred HHHHHHhHHHHhC
Q 004052 367 KDIFALNAAQFYK 379 (776)
Q Consensus 367 ~~Il~~NA~rly~ 379 (776)
.+++.+|++|+|+
T Consensus 279 ~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 279 DVMLRENPSQFFQ 291 (291)
T ss_dssp HHHHTHHHHHHCC
T ss_pred HHHHHHhHHHHhC
Confidence 9999999999985
No 39
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.32 E-value=1.3e-06 Score=92.32 Aligned_cols=152 Identities=17% Similarity=0.108 Sum_probs=90.4
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCC--cEEEEeCCCCchHHHHHHHHHhCCee
Q 004052 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSK--CRFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 211 l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~--l~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
.....|...+++|.++|+||.+|+.-. ...+-++++ +++. .++|+ |+-..-..++..+.. .++
T Consensus 111 ~Q~~~F~~ql~lA~e~~lPv~iH~r~a----------~~~~l~il~--~~~~~~~~~V~-H~fsG~~e~a~~~l~--~G~ 175 (287)
T 3rcm_A 111 LQEKALEAQLTLAAQLRLPVFLHERDA----------SERLLAILK--DYRDHLTGAVV-HCFTGEREALFAYLD--LDL 175 (287)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--TTGGGCSCEEE-CSCCCCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEcCCc----------HHHHHHHHH--HcCCCCCeEEE-EeCCCCHHHHHHHHH--CCc
Confidence 345567778899999999999999732 223446677 5543 35554 872112233333332 389
Q ss_pred eecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccc----hh----hHHHHHHHHHHhhhhhccCCCChh
Q 004052 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF----LG----AKRAREVVFSVLRDTCIDEDLSVG 360 (776)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~----~~----~~~~r~~l~~~l~~~v~~g~l~~~ 360 (776)
|+++++++.+. +. ...++++++..|.+|||+.||++..+...+ .+ ..+...++.. +++ ...++.
T Consensus 176 yis~~g~i~~~-k~--~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~~-lA~---~~g~s~- 247 (287)
T 3rcm_A 176 HIGITGWICDE-RR--GTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLRE-VAL---HRGESA- 247 (287)
T ss_dssp EEEECGGGGCT-TT--CGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHHH-HHH---HHTSCH-
T ss_pred EEEECchhccc-cC--HHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHHH-HHH---HhCcCH-
Confidence 99999866431 11 125778888999999999999654321111 00 1122232221 111 124564
Q ss_pred hHHHHHHHHHHHhHHHHhCCCCCccccC
Q 004052 361 EAIEVAKDIFALNAAQFYKINLGVKDFA 388 (776)
Q Consensus 361 ea~~~~~~Il~~NA~rly~l~~~~~~~~ 388 (776)
+.+..+++.|++|+|+++....-|+
T Consensus 248 ---eev~~~~~~N~~rlf~l~~~~~~~~ 272 (287)
T 3rcm_A 248 ---EHTAAHTTATARDFFQLPAENLYFQ 272 (287)
T ss_dssp ---HHHHHHHHHHHHHHTTCCCCC----
T ss_pred ---HHHHHHHHHHHHHHHCCChhhhHHh
Confidence 5688999999999999976654343
No 40
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.15 E-value=1.4e-05 Score=85.17 Aligned_cols=149 Identities=14% Similarity=0.069 Sum_probs=85.2
Q ss_pred HHHHHHHHHHhhCCCcEEEecC-CCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCC-chHHHHHHHHHhCCeeeec
Q 004052 214 YIFISSLEVAQFLDLPLQIHTG-FGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLD 291 (776)
Q Consensus 214 ~~l~~l~e~a~e~glPvq~H~G-~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~-p~~~e~~~la~~~pNVyld 291 (776)
..|...+++|.++|+||.+|++ .+.. .+..+ ++++....|..++++.|+.. ....++..++..--+|.++
T Consensus 151 ~~~~~~~~lA~~~~~pv~iH~~~~~~~-------~~~~~-~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~ 222 (314)
T 2vc7_A 151 KVIRAAAIANKETKVPIITHSNAHNNT-------GLEQQ-RILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLD 222 (314)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCTTTTH-------HHHHH-HHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHCCEEEEeCCCcccC-------hHHHH-HHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEe
Confidence 3566678899999999999997 2211 12223 45554356778999999953 2234445555442234444
Q ss_pred ccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcc----ccchh---------hHHHHHHHHHHhhhhhccCCCC
Q 004052 292 FGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPE----TYFLG---------AKRAREVVFSVLRDTCIDEDLS 358 (776)
Q Consensus 292 ~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~----~~~~~---------~~~~r~~l~~~l~~~v~~g~l~ 358 (776)
..++..+.......+.+..+++.++.+|||++||++..|. ..++. ..++++.+. . ++...++
T Consensus 223 ~~~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~----~-l~~~g~~ 297 (314)
T 2vc7_A 223 RYGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTIP----F-LKRNGVN 297 (314)
T ss_dssp CTTCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHHH----H-HHHTTCC
T ss_pred CCCcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHHHH----H-HHHcCCC
Confidence 3223211122234456777777767799999999743220 00111 001222222 1 1222456
Q ss_pred hhhHHHHHHHHHHHhHHHHhC
Q 004052 359 VGEAIEVAKDIFALNAAQFYK 379 (776)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~ 379 (776)
. +.+.+++++|++|+|+
T Consensus 298 ~----e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 298 E----EVIATIFKENPKKFFS 314 (314)
T ss_dssp H----HHHHHHHTHHHHHHTC
T ss_pred H----HHHHHHHHHCHHHHhC
Confidence 4 6799999999999985
No 41
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.13 E-value=5.9e-06 Score=85.73 Aligned_cols=140 Identities=15% Similarity=0.072 Sum_probs=87.0
Q ss_pred hhhHHHHHHHHHHhhCCCcEE-EecCCCCCCCCcCCcChhhhHHHHHhcCCCCc-EEEEeCCCCchHHHHHHHHHhCCee
Q 004052 211 LIDYIFISSLEVAQFLDLPLQ-IHTGFGDKDLDLRLSNPLHLRAILEDKRFSKC-RFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 211 l~d~~l~~l~e~a~e~glPvq-~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l-~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
.+...|...+++|.++++||. +|+.-. ...+-++++ ++|.. ++| .|+-..-..++..+.. .++
T Consensus 101 ~Q~~~F~~ql~lA~e~~lPviSiH~r~a----------~~~~~~il~--~~~~~~~~v-~H~fsG~~e~a~~~l~--~G~ 165 (254)
T 3gg7_A 101 QQFAVFQHILRRCEDHGGRILSIHSRRA----------ESEVLNCLE--ANPRSGTPI-LHWYSGSVTELRRAIS--LGC 165 (254)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTTC----------HHHHHHHHH--HCGGGEEEE-EETCCSCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEcCCc----------HHHHHHHHH--HcCCCCcEE-EEeCCCCHHHHHHHHc--CCc
Confidence 345567778899999999999 999632 223446677 46644 444 4872112233333332 489
Q ss_pred eecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchh----hHHHHHHHHHHhhhhhccCCCChhhHHH
Q 004052 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (776)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~----~~~~r~~l~~~l~~~v~~g~l~~~ea~~ 364 (776)
|++++++... ...++++++..|.+|||+.||++..| +.+ ..+....+. .+++. ..++. +
T Consensus 166 yis~~g~~~~------~~~~~~~v~~ip~drlLlETD~P~~~---~rg~~n~P~~v~~v~~-~iA~~---~g~~~----e 228 (254)
T 3gg7_A 166 WFSVGPTMVR------TQKGAALIRSMPRDRVLTETDGPFLE---LDGQAALPWDVKSVVE-GLSKI---WQIPA----S 228 (254)
T ss_dssp EEEECHHHHT------SHHHHHHHHHSCGGGEEECCCTTTSE---ETTEECCGGGHHHHHH-HHHHH---HTSCH----H
T ss_pred EEEECcccCc------hHHHHHHHHHcCCCeEEEeCCCCccc---cCCCCCCHHHHHHHHH-HHHHH---hCcCH----H
Confidence 9999886531 23578889999999999999965433 111 112222222 12221 23554 5
Q ss_pred HHHHHHHHhHHHHhCCCC
Q 004052 365 VAKDIFALNAAQFYKINL 382 (776)
Q Consensus 365 ~~~~Il~~NA~rly~l~~ 382 (776)
.+..++++|++|+|+++.
T Consensus 229 e~~~~~~~N~~~lf~~~~ 246 (254)
T 3gg7_A 229 EVERIVKENVSRLLGTVR 246 (254)
T ss_dssp HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHCCCc
Confidence 688999999999999864
No 42
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.13 E-value=4.1e-05 Score=83.46 Aligned_cols=155 Identities=15% Similarity=0.053 Sum_probs=91.8
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCeeeeccc
Q 004052 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFG 293 (776)
Q Consensus 215 ~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g-~p~~~e~~~la~~~pNVyld~s 293 (776)
.|...++++.+.|+||.+|++.+.. + ...+ +++++...|..++++.|++ ......+..++.. -..|++++
T Consensus 170 ~f~aq~~~A~e~glPViiH~r~gr~------a-~d~l-~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~-~G~yI~f~ 240 (363)
T 3ovg_A 170 ALEVAARTSILTGCPILVHTQLGTM------A-LEVA-KHLIGFGANPDKIQISHLNKNPDKYYYEKVIKE-TGVTLCFD 240 (363)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETTCS------H-HHHH-HHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHH-HCCEEEEC
T ss_pred HHHHHHHHHHHhCCEEEEeCCCCCC------H-HHHH-HHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHH-CCcEEEEC
Confidence 4555578888999999999985411 1 1223 5666445677789999996 2333333333311 15788777
Q ss_pred ccCCC--ccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhH------HHHHHHHHHhhhhhccCCCChhhHHHH
Q 004052 294 LAIPK--LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAK------RAREVVFSVLRDTCIDEDLSVGEAIEV 365 (776)
Q Consensus 294 ~~~~~--~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~------~~r~~l~~~l~~~v~~g~l~~~ea~~~ 365 (776)
+...+ .....-...++++++.++.+|||++||++..|...+.+.. .. ..+-.++...++...++. +.
T Consensus 241 g~~~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p-~~l~~~~~~~a~~rGis~----ee 315 (363)
T 3ovg_A 241 GPDRVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGL-AYLFDRFLPLLKQVGVSK----EA 315 (363)
T ss_dssp CTTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCT-HHHHHTHHHHHHHHTCCH----HH
T ss_pred CeeccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCc-cHHHHHHHHHHHHcCCCH----HH
Confidence 65321 1111123578999999999999999997643211010110 00 001111222233334664 56
Q ss_pred HHHHHHHhHHHHhCCCCC
Q 004052 366 AKDIFALNAAQFYKINLG 383 (776)
Q Consensus 366 ~~~Il~~NA~rly~l~~~ 383 (776)
+.+++.+|++|+|++...
T Consensus 316 i~~it~~Np~rlf~l~~~ 333 (363)
T 3ovg_A 316 IFDILVNNPKRVLAFDEK 333 (363)
T ss_dssp HHHHHTHHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHHCCCCc
Confidence 999999999999999644
No 43
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.07 E-value=1.4e-05 Score=86.18 Aligned_cols=151 Identities=15% Similarity=0.125 Sum_probs=88.8
Q ss_pred HHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCeeeecccc
Q 004052 216 FISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGL 294 (776)
Q Consensus 216 l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g-~p~~~e~~~la~~~pNVyld~s~ 294 (776)
|..-++++.++|+||.+|++.|.. + ... -+++++...|..++++.||. ......+..++. -.+|+++++
T Consensus 170 f~aq~~~A~~~glPViiH~r~g~~------a-~~~-l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~--~G~~i~~~g 239 (330)
T 3pnz_A 170 IRAVARAHHETKAPIHSHTEAGTM------A-LEQ-IEILKQENIPLEYLSIGHMDRNLDPYYHKQVAK--TGAFMSFDG 239 (330)
T ss_dssp HHHHHHHHHHHCCCEEEECGGGCC------H-HHH-HHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHT--TTCEEEECC
T ss_pred HHHHHHHHHHHCCeEEEeCCCCcC------h-HHH-HHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHH--cCcEEEEcc
Confidence 444567888999999999985310 1 112 34555445666789999994 222233334443 369999988
Q ss_pred cCCCc-cHHH-HHHHHHHHHHHCCCCcEEEecCCCCCccccch--hh--H-HHHHHHHHHhhhhhccCCCChhhHHHH-H
Q 004052 295 AIPKL-SVQG-MISSIKELLELAPTKKVMFSTDAYASPETYFL--GA--K-RAREVVFSVLRDTCIDEDLSVGEAIEV-A 366 (776)
Q Consensus 295 ~~~~~-~~~g-~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~--~~--~-~~r~~l~~~l~~~v~~g~l~~~ea~~~-~ 366 (776)
+.... .++. ....++++++.++.+|||++||++.-+...+. +. . .+...+.++ .+.++...++. +. +
T Consensus 240 ~~t~~~~~~~~~~~~l~~lv~~g~~drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~~l-~~~a~~~Gis~----ee~i 314 (330)
T 3pnz_A 240 IAKIKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRF-IDEANEKGFDG----EKLV 314 (330)
T ss_dssp TTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHHHH-HHHHHHTTSCH----HHHH
T ss_pred CcccCCCChHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCCCccCCCCCcchHHHHHHHHH-HHHHHHcCCCH----HHHH
Confidence 64221 1111 23468889999999999999997531100000 00 0 112222111 11123345664 54 9
Q ss_pred HHHHHHhHHHHhCCC
Q 004052 367 KDIFALNAAQFYKIN 381 (776)
Q Consensus 367 ~~Il~~NA~rly~l~ 381 (776)
.+++.+|++|+|+++
T Consensus 315 ~~~t~~Np~rlf~l~ 329 (330)
T 3pnz_A 315 KKFFVDNPARCFTFK 329 (330)
T ss_dssp HHHHTHHHHHHSSCC
T ss_pred HHHHHHhHHHHhcCC
Confidence 999999999999985
No 44
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.02 E-value=4.4e-05 Score=83.37 Aligned_cols=153 Identities=15% Similarity=0.160 Sum_probs=90.2
Q ss_pred HHHHHHHHHhhCCCcEEEec-CCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCC-c-hHHHHHHHHHhCCeeeec
Q 004052 215 IFISSLEVAQFLDLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-P-FSKEASYLAYVYPQVYLD 291 (776)
Q Consensus 215 ~l~~l~e~a~e~glPvq~H~-G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~-p-~~~e~~~la~~~pNVyld 291 (776)
.|....+++.+.|+||.+|+ |.++. ...+-.++++...|..++++.|+.. . -...+..++.. .+|++
T Consensus 191 ~f~aq~~~A~~~glPV~iH~~gr~~a--------~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~--G~~I~ 260 (364)
T 3k2g_A 191 SLRGAARAQVRTGLPLMVHLPGWFRL--------AHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQR--GAFLE 260 (364)
T ss_dssp HHHHHHHHHHHHCCCEEEECCTTSCC--------HHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHH--TCEEE
T ss_pred HHHHHHHHHHHHCCeEEEecCCCCcc--------HHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhC--CcEEE
Confidence 34455677889999999997 44321 2323345664456667899999941 2 22334444432 68888
Q ss_pred cccc-----CCCc-----cHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc-cchhhHHHHHHHHHHhhhhhccCCCChh
Q 004052 292 FGLA-----IPKL-----SVQGMISSIKELLELAPTKKVMFSTDAYASPET-YFLGAKRAREVVFSVLRDTCIDEDLSVG 360 (776)
Q Consensus 292 ~s~~-----~~~~-----~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~-~~~~~~~~r~~l~~~l~~~v~~g~l~~~ 360 (776)
+++. |+.. +.......++++++.++.+|||++||++..|.. .+.+.. ....+..++... +...++.
T Consensus 261 f~g~gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~-~~~l~~~~~~~l-~~~Gis~- 337 (364)
T 3k2g_A 261 FDMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNG-YAFVTKHFLPRL-RRHGLDD- 337 (364)
T ss_dssp ECCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCT-TSHHHHHHHHHH-HHTTCCH-
T ss_pred ecCCcccccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCC-cchHHHHHHHHH-HHcCCCH-
Confidence 7765 2210 001124578999999999999999998643311 111100 011111111111 2234664
Q ss_pred hHHHHHHHHHHHhHHHHhCCCCC
Q 004052 361 EAIEVAKDIFALNAAQFYKINLG 383 (776)
Q Consensus 361 ea~~~~~~Il~~NA~rly~l~~~ 383 (776)
+.+.+++.+|++|+|++...
T Consensus 338 ---eei~~~~~~Np~rlf~l~~~ 357 (364)
T 3k2g_A 338 ---AALETLMVTNPRRVFDASIE 357 (364)
T ss_dssp ---HHHHHHHTHHHHHHHCTTSC
T ss_pred ---HHHHHHHHHHHHHHhCCCcc
Confidence 56999999999999998654
No 45
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=97.91 E-value=6e-05 Score=81.53 Aligned_cols=150 Identities=14% Similarity=0.106 Sum_probs=88.8
Q ss_pred HHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCeeeecccc
Q 004052 216 FISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGL 294 (776)
Q Consensus 216 l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g-~p~~~e~~~la~~~pNVyld~s~ 294 (776)
|..-++++.++|+||.+|+|.|.. + .. .-+++++...|..++++.|+. .....++..++. -..|+++++
T Consensus 175 f~aq~~lA~~~glPViiH~~~gr~------a-~~-~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~--~G~~i~~~g 244 (339)
T 3gtx_A 175 FRAAARVQRETGVPIITHTQEGQQ------G-PQ-QAELLTSLGADPARIMIGHMDGNTDPAYHRETLR--HGVSIAFDR 244 (339)
T ss_dssp HHHHHHHHHHHCCCEEEECSTTCC------H-HH-HHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHT--TTCEEEECC
T ss_pred HHHHHHHHHHHCCeEEEeCCCCcC------H-HH-HHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHH--cCcEEEEcc
Confidence 344467888999999999986521 1 11 344666546777889999994 233344444443 368888877
Q ss_pred cCC--Cc--cHH-HHHHHHHHHHHHCCCCcEEEecCCCCC--cccc-chhhHHHH------HHHHHHhhhhhccCCCChh
Q 004052 295 AIP--KL--SVQ-GMISSIKELLELAPTKKVMFSTDAYAS--PETY-FLGAKRAR------EVVFSVLRDTCIDEDLSVG 360 (776)
Q Consensus 295 ~~~--~~--~~~-g~~~~l~~~le~~~~~kilfgSD~~~~--P~~~-~~~~~~~r------~~l~~~l~~~v~~g~l~~~ 360 (776)
+.. +. ... .-...++++++.++.+|||++||++.. |.-. .+.....+ ..+-..+...++...++.
T Consensus 245 ~~t~~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~~~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~- 323 (339)
T 3gtx_A 245 IGLQGMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPLHISDDILPDLRRRGITE- 323 (339)
T ss_dssp TTCCSSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCH-
T ss_pred CccccccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCccccCCcccccccccccCCCCCchhHHHHHHHHHHHcCCCH-
Confidence 531 10 001 123478999999999999999997642 1000 00011000 011112222333345664
Q ss_pred hHHHHHHHHHHHhHHHHhC
Q 004052 361 EAIEVAKDIFALNAAQFYK 379 (776)
Q Consensus 361 ea~~~~~~Il~~NA~rly~ 379 (776)
+.+.+++..|++|+|+
T Consensus 324 ---e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 324 ---EQVGQMTVGNPARLFG 339 (339)
T ss_dssp ---HHHHHHHTHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHHhC
Confidence 5699999999999985
No 46
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=97.86 E-value=8.7e-05 Score=79.98 Aligned_cols=148 Identities=17% Similarity=0.100 Sum_probs=87.4
Q ss_pred HHHHHHHHhhCCCcEEEecCC-CCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCC-chHHHHHHHHHhCCeeeeccc
Q 004052 216 FISSLEVAQFLDLPLQIHTGF-GDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDFG 293 (776)
Q Consensus 216 l~~l~e~a~e~glPvq~H~G~-gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~-p~~~e~~~la~~~pNVyld~s 293 (776)
|....+++.++|+||.+|+|. |. ....+-.+++....+..++++.||.. .-...+..++. -.+|++++
T Consensus 150 f~~q~~lA~~~glPv~iH~~~~~r--------~a~e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~--~G~~i~~~ 219 (330)
T 2ob3_A 150 LKAAARASLATGVPVTTHTAASQR--------DGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAA--RGYLIGLD 219 (330)
T ss_dssp HHHHHHHHHHHCCCEEEECCGGGT--------HHHHHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHH--TTCEEEEC
T ss_pred HHHHHHHHHHhCCeEEEECCCCCC--------CHHHHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHh--CCCEEEeC
Confidence 445568888999999999972 21 01122235554345566888999831 22233333333 37898888
Q ss_pred --ccCCC--------------ccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccc---hhhH-------HHHHHHHHH
Q 004052 294 --LAIPK--------------LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF---LGAK-------RAREVVFSV 347 (776)
Q Consensus 294 --~~~~~--------------~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~---~~~~-------~~r~~l~~~ 347 (776)
++..+ .+...-...++++++.+|.+|||++||++.++. .+ .+.. .+...+..+
T Consensus 220 ~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~-~~~~~~g~~~~~n~pn~~~~~~~~~ 298 (330)
T 2ob3_A 220 HIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFS-SYVTNIMDVMDRVNPDGMAFIPLRV 298 (330)
T ss_dssp CTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEEC-SSSTTHHHHHHHHCTTGGGHHHHTH
T ss_pred CCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCcc-cccccCCCcccccCCCCcchHHHHH
Confidence 54332 111111346899999999999999999754111 11 0111 111223333
Q ss_pred hhhhhccCCCChhhHHHHHHHHHHHhHHHHhC
Q 004052 348 LRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (776)
Q Consensus 348 l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (776)
+.++.+. .++. +.+..++..|++|+|+
T Consensus 299 ia~l~~~-G~~~----eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 299 IPFLREK-GVPQ----ETLAGITVTNPARFLS 325 (330)
T ss_dssp HHHHHHT-TCCH----HHHHHHHTHHHHHHHS
T ss_pred HHHHHHc-CCCH----HHHHHHHHHHHHHHhc
Confidence 4444443 3665 5689999999999998
No 47
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.85 E-value=0.00036 Score=75.88 Aligned_cols=156 Identities=15% Similarity=0.087 Sum_probs=88.1
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCeee
Q 004052 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVY 289 (776)
Q Consensus 211 l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g-~p~~~e~~~la~~~pNVy 289 (776)
.....|....+++.+.|+||.+|+..+.. .+..++-+.+. ..|--++|+.|++ ......+..++..--.+.
T Consensus 190 ~E~k~frA~a~aa~etG~Pv~iHt~~~~~-------~~e~l~iL~ee-G~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~ 261 (360)
T 3tn4_A 190 YEKMFFRAAARAQKETGAVIITHTQEGTM-------GPEQAAYLLEH-GADPKKIVIGHMCDNTDPDYHRKTLAYGVYIA 261 (360)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEECSTTCC-------HHHHHHHHHHT-TCCGGGEEECCGGGCCCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEcCcccC-------CHHHHHHHHHc-CCCCCceEEEcCCCCCCHHHHHHHHHcCCEEE
Confidence 34445666788899999999999986521 23345444443 4566788999952 222222334443323444
Q ss_pred ecccccCCC--ccHHH-HHHHHHHHHHHCCCCcEEEecCCC----CCccccchhhH------HHHHHHHHHhhhhhccCC
Q 004052 290 LDFGLAIPK--LSVQG-MISSIKELLELAPTKKVMFSTDAY----ASPETYFLGAK------RAREVVFSVLRDTCIDED 356 (776)
Q Consensus 290 ld~s~~~~~--~~~~g-~~~~l~~~le~~~~~kilfgSD~~----~~P~~~~~~~~------~~r~~l~~~l~~~v~~g~ 356 (776)
+|.-++... ...+. -...++++++.++.+|||.+||+. ..|...-...+ .+...+.+++.++.+.|
T Consensus 262 fD~iG~~~~~~~p~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~L~~~G- 340 (360)
T 3tn4_A 262 FDRFGIQGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPALKNEG- 340 (360)
T ss_dssp ECCTTCCCSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHHHHHTT-
T ss_pred EcccccccccCCCChHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHHHHHcC-
Confidence 443222111 11111 234789999999999999999961 11210000000 01123444444444333
Q ss_pred CChhhHHHHHHHHHHHhHHHHhC
Q 004052 357 LSVGEAIEVAKDIFALNAAQFYK 379 (776)
Q Consensus 357 l~~~ea~~~~~~Il~~NA~rly~ 379 (776)
++. +.+++|+.+|++|+|-
T Consensus 341 vs~----e~I~~i~~~NP~rlfs 359 (360)
T 3tn4_A 341 IRD----EVLEQMFIGNPAALFS 359 (360)
T ss_dssp CCH----HHHHHHHTHHHHHHHC
T ss_pred CCH----HHHHHHHHHhHHHHhc
Confidence 553 6799999999999984
No 48
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.80 E-value=1.3e-05 Score=83.59 Aligned_cols=139 Identities=19% Similarity=0.237 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeeccc
Q 004052 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFG 293 (776)
Q Consensus 214 ~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s 293 (776)
..|...+++|.++|+||++|+..+.. ......+-++++....|..++++.|++....+ .+. --++|++++
T Consensus 110 ~~f~~ql~lA~e~~lPv~iH~r~~~~-----~~a~~~~~~il~~~~~~~~~~vi~H~~~~~a~---~~l--~~G~yis~~ 179 (261)
T 3guw_A 110 EVLKSQLELAKRMDVPCIIHTPRGNK-----LKATRKTLEILESLDFPADLAVIDHVNFETLD---MVL--ETEYWIGLT 179 (261)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCSSST-----THHHHHHHHHHHHTTCCTTSEEEESCCTTTHH---HHH--TSSSEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCCcc-----cchHHHHHHHHHHcCCCCCCEEEEeCCHHHHH---HHH--hCCEEEEec
Confidence 35667789999999999999974310 11123455667643456677888999543332 222 247999998
Q ss_pred ---ccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHH
Q 004052 294 ---LAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIF 370 (776)
Q Consensus 294 ---~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il 370 (776)
++..+ . ..+++++..|.+|||+.||++.-|.. ..+..+.+.. +.+. ..++ + +.+++
T Consensus 180 ~~pg~~t~--~-----~~~~~v~~ipldrlLlETD~P~~pn~----P~~v~~~~~~-la~~---~g~~-----~-v~~~~ 238 (261)
T 3guw_A 180 VQPGKLSA--E-----DAARIVAEHGPERFMLNSDAGYRDVE----ITTVAEAAVK-IEEA---VGRE-----E-MEKVA 238 (261)
T ss_dssp CC--------------CCTTGGGGCC-CCEEEECCCCCC----------CCCCTTH-HHHH---CTTG-----G-GGHHH
T ss_pred CCCCcccH--H-----HHHHHHHhCCcceEEEecCCCCCCCC----HHHHHHHHHH-HHhh---CChh-----H-HHHHH
Confidence 54432 1 12577888999999999995432210 0011111110 1110 1232 2 88999
Q ss_pred HHhHHHHhCCCCC
Q 004052 371 ALNAAQFYKINLG 383 (776)
Q Consensus 371 ~~NA~rly~l~~~ 383 (776)
++|++|+|+++..
T Consensus 239 ~~Na~rlf~~~~~ 251 (261)
T 3guw_A 239 RENARKFLRVLEA 251 (261)
T ss_dssp HSSHHHHTTC---
T ss_pred HHHHHHHHCCCch
Confidence 9999999998644
No 49
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.79 E-value=0.00012 Score=79.81 Aligned_cols=155 Identities=14% Similarity=0.118 Sum_probs=91.0
Q ss_pred HHHHHHHHHhhC-CCcEEEec-CCCCCCCCcCCcChhhhHHHHHhc-CCCCcEEEEeCCCC--chHHHHHHHHHhCCeee
Q 004052 215 IFISSLEVAQFL-DLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDK-RFSKCRFVLLHASY--PFSKEASYLAYVYPQVY 289 (776)
Q Consensus 215 ~l~~l~e~a~e~-glPvq~H~-G~gd~~~~~~~~~P~~L~~l~~~~-~~P~l~ivl~H~g~--p~~~e~~~la~~~pNVy 289 (776)
.|....+++.++ |+||.+|+ +.++. ...+-.++++. ..|..++++.|+.. .-...+..++. -.+|
T Consensus 180 ~f~aq~~~A~~~~glPV~iH~~r~~~a--------~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~--~G~~ 249 (365)
T 3rhg_A 180 SLRAAALAQNNNPYASMNIHMPGWQRR--------GDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLD--RGVW 249 (365)
T ss_dssp HHHHHHHHHTTCTTCEEEEECCTTSCC--------HHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHhcCCcEEEECCCCCcC--------HHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHh--CCCE
Confidence 344457888999 99999997 64321 23334455543 45666799999942 22233344443 3688
Q ss_pred eccccc-----CCCc----cHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChh
Q 004052 290 LDFGLA-----IPKL----SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVG 360 (776)
Q Consensus 290 ld~s~~-----~~~~----~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ 360 (776)
+++++. |+.. +...-...++++++.++.+|||++||++..+...+.+.......+..+ ...++...++.
T Consensus 250 I~~~g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l~~~~-~~~~~~~Gis~- 327 (365)
T 3rhg_A 250 LEFDMIGLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFVPNVF-LSLLAQRGIDK- 327 (365)
T ss_dssp EEECCTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHHHHTH-HHHHHHTTCCH-
T ss_pred EEecCCCccccccccccccchHHHHHHHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhHHHHH-HHHHHHcCCCH-
Confidence 888764 2110 001123478899999999999999998654421111000000111111 11222335664
Q ss_pred hHHHHHHHHHHHhHHHHhCCCCCc
Q 004052 361 EAIEVAKDIFALNAAQFYKINLGV 384 (776)
Q Consensus 361 ea~~~~~~Il~~NA~rly~l~~~~ 384 (776)
+.+.+++..|++|+|++...+
T Consensus 328 ---e~i~~~~~~Np~rlf~l~~~~ 348 (365)
T 3rhg_A 328 ---TIIDKLCIDNPANLLAAENLY 348 (365)
T ss_dssp ---HHHHHHTTHHHHHHHHSCCSS
T ss_pred ---HHHHHHHHHHHHHHHCCCCcc
Confidence 569999999999999986544
No 50
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=97.73 E-value=0.00029 Score=77.25 Aligned_cols=95 Identities=18% Similarity=0.203 Sum_probs=70.3
Q ss_pred eeeccCCCCCceEEecccch-HHHhhhHHHHHHHHHHHHHHHcCCee---Eeccc-----------cc------------
Q 004052 583 EQLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLA---TFVPK-----------FA------------ 635 (776)
Q Consensus 583 e~~h~E~~pGQ~Ei~l~~~~-~l~aaD~~~~~r~~ik~vA~~~G~~a---TFmpK-----------P~------------ 635 (776)
..+..|..-+|.|++..|+. .-++.+.+...+..++++|.++|... .+.|+ |.
T Consensus 48 ~~it~E~~~~qlEl~t~p~~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~g~~~ 127 (372)
T 1r8g_A 48 GEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLI 127 (372)
T ss_dssp SEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGG
T ss_pred CcccchhhccEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHHHHHH
Confidence 46788999999999999975 66688999999999999999988764 34443 21
Q ss_pred CCCCCccceeeeccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCC
Q 004052 636 LDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (776)
Q Consensus 636 ~~~~GsG~HvH~Sl~~~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~ 694 (776)
....-+|+|+|+|+-+. ...-..+-.++.++|-++|+++.++
T Consensus 128 ~~~~i~g~hvhv~~~~~-----------------~~~~~~~~~~~~~~p~l~aL~anSP 169 (372)
T 1r8g_A 128 QQATVFGQHVHVGCASG-----------------DDAIYLLHGLSRFVPHFIALSAASP 169 (372)
T ss_dssp CSCCBCEEEEEEECSSH-----------------HHHHHHHHHHHTTHHHHHHHHCCBC
T ss_pred HhhceeeEEEEeCCCCH-----------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 11123899999998531 1234455667788899999888665
No 51
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=97.62 E-value=0.00037 Score=74.67 Aligned_cols=142 Identities=11% Similarity=0.066 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHhh-CCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeec
Q 004052 213 DYIFISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (776)
Q Consensus 213 d~~l~~l~e~a~e-~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld 291 (776)
...|...+++|.+ +++||.+|+--. . ..+-++++....+..+.|+ |+-..-..++..+.. -++|++
T Consensus 153 ~~~F~~ql~lA~e~~~lPviiH~r~A---------~-~d~l~iL~~~~~~~~~gVi-H~FsGs~e~a~~~l~--lG~yis 219 (325)
T 3ipw_A 153 LSGYRTLSILHQKYPYLPFFFHCRKS---------W-SDLCQLNKELGYNGCKGVV-HCFDGTEEEMNQILN--EGWDIG 219 (325)
T ss_dssp HHHHHHTHHHHHHCTTCCEEEEEESC---------H-HHHHHHHHHTTCTTSCEEE-CSCCCCHHHHHHHHH--TTCEEE
T ss_pred HHHHHHHHHHHHHhhCCeEEEEeCch---------H-HHHHHHHHhcCCCCCcEEE-EECCCCHHHHHHHHh--cCcEEe
Confidence 3455666899999 999999999532 1 1234566632222345555 981111223333332 269999
Q ss_pred ccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCc-ccc----------ch-------------h----hHHHHHH
Q 004052 292 FGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ETY----------FL-------------G----AKRAREV 343 (776)
Q Consensus 292 ~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-~~~----------~~-------------~----~~~~r~~ 343 (776)
+++.. . + . ...+ +++..+|.+|||.-||+++.+ ... .+ + ..+...+
T Consensus 220 ~~G~~-~--k-~-~~~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v 293 (325)
T 3ipw_A 220 VTGNS-L--Q-S-IELL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDI 293 (325)
T ss_dssp ECSGG-G--S-S-HHHH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHH
T ss_pred eCccc-c--C-c-HHHH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHH
Confidence 99853 1 1 1 1223 688899999999999976531 000 00 0 1122222
Q ss_pred HHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCC
Q 004052 344 VFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 344 l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (776)
+ +.+++. ..++. +.+..+.+.|+.|||++.
T Consensus 294 ~-~~iA~l---~g~~~----eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 294 A-IIMSSI---KHISL----FEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp H-HHHHHH---HTCCH----HHHHHHHHHHHHHHHSCC
T ss_pred H-HHHHHh---hCcCH----HHHHHHHHHHHHHHhCcC
Confidence 2 223322 23564 568889999999999875
No 52
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.041 Score=60.24 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHhhC----CCcEEEecCCCCCCCCcCCcChhhhHHHHHh--c-----------------------CCC-
Q 004052 212 IDYIFISSLEVAQFL----DLPLQIHTGFGDKDLDLRLSNPLHLRAILED--K-----------------------RFS- 261 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~----glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~--~-----------------------~~P- 261 (776)
....|..-+++|.++ ++||.+|+--. .-. +-++++. . +||
T Consensus 177 Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~A---------~~d-~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (401)
T 3e2v_A 177 QKVFFEEQLKISCLNDKLSSYPLFLHMRSA---------CDD-FVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHP 246 (401)
T ss_dssp HHHHHHHHHHHTTSSHHHHTSCEEEEEESC---------HHH-HHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCT
T ss_pred HHHHHHHHHHHHHhhhccCCCeEEEEecch---------HHH-HHHHHHHhhccccccccccccccccccccccccccCC
Confidence 334556667899999 99999998421 111 1122321 0 122
Q ss_pred CcEEEEeCCCCchHHHHHHHHHhCCeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCC
Q 004052 262 KCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYA 328 (776)
Q Consensus 262 ~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~ 328 (776)
..+ +++|+-.--..++..+...-+|+|+.+++.. .- . .. ..+++..+|.+|||.-||+++
T Consensus 247 ~~~-~V~H~FsGs~e~a~~~l~lG~~~yis~~g~~-~k---~-~~-~~e~v~~iPldrLLlETDaP~ 306 (401)
T 3e2v_A 247 DRK-LVVHSFTGSAIDLQKLLNLSPNIFIGVNGCS-LR---T-EE-NLAVVKQIPTERLLLETDAPW 306 (401)
T ss_dssp TCC-EEECSCCCCHHHHHHHHHHCTTEEEEECGGG-GS---S-HH-HHHHHHTSCGGGEEECCCTTS
T ss_pred CCc-EEEEcCCCCHHHHHHHHhCCCCEEEEeCCEe-cC---C-HH-HHHHHHhCCchhEEEecCCCC
Confidence 234 4569811112334444444478999999862 11 1 12 237888999999999999874
No 53
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=96.59 E-value=0.012 Score=65.80 Aligned_cols=135 Identities=20% Similarity=0.214 Sum_probs=87.8
Q ss_pred ceeEEeeeeEEEEEeecccCCCCCccccCCCCcccCCccccchHHHHHHHHHH-HhCCC-------Ce-------eeecc
Q 004052 523 LVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADL-HSLNI-------SV-------EQLHA 587 (776)
Q Consensus 523 ~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~Gi-------~v-------e~~h~ 587 (776)
-...+|+|.||++++.. ++ .|. .+. -..++++.| ...|. .+ ..+..
T Consensus 33 ~~~~iGvE~E~~lVd~~--~~----~~~---------~~~----~~~~lL~~l~~~~g~~~~~~~~~~~~l~~~~~~i~~ 93 (449)
T 2gwd_A 33 EKWRIGTEHEKFGFEVN--TL----RPM---------KYD----QIAELLNSIAERFEWEKVMEGDKIIGLKQGKQSISL 93 (449)
T ss_dssp GGCCEEEEEEEEEEETT--TC----CBC---------CHH----HHHHHHHHHHHHHTCEEEEETTEEEEEEETTEEEEE
T ss_pred CCCeEEEEeEEEeeecC--CC----CCC---------ChH----HHHHHHHHHHHhhccCccccccccccccCCCceEEe
Confidence 35899999999999871 11 111 111 223444444 22232 11 11666
Q ss_pred CCCCCceEEecccch-HHHhhhHHHHHHHHHHHHHHHcCCee---Eeccc-----------cc----------CCCC---
Q 004052 588 EAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLA---TFVPK-----------FA----------LDDI--- 639 (776)
Q Consensus 588 E~~pGQ~Ei~l~~~~-~l~aaD~~~~~r~~ik~vA~~~G~~a---TFmpK-----------P~----------~~~~--- 639 (776)
|-+ +|+|++..|+. .-++.+.+...+..++++|.++|+.. .+.|+ |. .+..
T Consensus 94 E~~-~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~m~~~~~~~g~~g~~ 172 (449)
T 2gwd_A 94 EPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGMGFQPKWRREDIPTMPKGRYDIMRNYMPKVGSLGLD 172 (449)
T ss_dssp CTT-CCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEEECCSBCSSCCGGGSCCCSCHHHHHHHHHGGGTCSSHHH
T ss_pred cCC-ceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCceeeccCCCCCCccccCCCCchHHHHHHHHHHHhchhHHH
Confidence 776 99999999985 56788999999999999999999764 23443 21 0222
Q ss_pred ----CccceeeeccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCC
Q 004052 640 ----GSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (776)
Q Consensus 640 ----GsG~HvH~Sl~~~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~ 694 (776)
-+|+|||+++-+.. .+...+..++...|.++|+++-++
T Consensus 173 mm~~~~g~qVhl~~~~~~-----------------~~~~~~~~~~~~~P~llALsAnSP 214 (449)
T 2gwd_A 173 MMLRTCTVQVNLDFSSEA-----------------DMIRKFRAGLALQPIATALFANSP 214 (449)
T ss_dssp HHHHBCEEEEEECCSSHH-----------------HHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HhhcceeeEEEecCCCHH-----------------HHHHHHHHHHHHHHHHHHHHhCCc
Confidence 47789999985311 234556677888899999887654
No 54
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=96.16 E-value=0.0048 Score=66.70 Aligned_cols=78 Identities=13% Similarity=0.147 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChh----hhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCee
Q 004052 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPL----HLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 213 d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~----~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
+..+.++++.+++.|.|+.+|.+-.+..++...+... .+..++. +++++++++.|.+.....+...-+ ..||
T Consensus 119 ~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la--~~~~~~~hi~Hvst~~~~~~i~~a--k~~V 194 (347)
T 2z26_A 119 VDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQ--RLTALKVVFEHITTKDAADYVRDG--NERL 194 (347)
T ss_dssp GGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHH--HSTTCCEEECSCCSHHHHHHHHTS--CTTE
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHH--hhcCCcEEEEECCcHHHHHHHHHh--CCCc
Confidence 3456778899999999999999854311111100111 1222344 589999999998754333332223 2689
Q ss_pred eecccc
Q 004052 289 YLDFGL 294 (776)
Q Consensus 289 yld~s~ 294 (776)
+.+++.
T Consensus 195 t~e~~p 200 (347)
T 2z26_A 195 AATITP 200 (347)
T ss_dssp EEEECH
T ss_pred eEeecc
Confidence 998764
No 55
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=96.15 E-value=0.021 Score=61.00 Aligned_cols=68 Identities=7% Similarity=0.124 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcc---------------------------cc--chhhHHHHHHHHHHhhh
Q 004052 300 SVQGMISSIKELLELAPTKKVMFSTDAYASPE---------------------------TY--FLGAKRAREVVFSVLRD 350 (776)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~---------------------------~~--~~~~~~~r~~l~~~l~~ 350 (776)
+.+.+.+++..+.+.+|.++|.+||| ||. .. +.....+.. ++.+
T Consensus 224 t~~~~~~hi~~i~~~~G~dhVgiGsD---f~~~~~~~~~~~~~~~dg~~~~~~~~G~~~~~~gl~~~~~~~~----l~~~ 296 (325)
T 2i5g_A 224 TIDDYAEAIEYVMNIVGEDAIGIGTD---FTQGHGHDFFEWLTHDKGYARRLTNFGKIVNPLGIRTVGEFPN----LTET 296 (325)
T ss_dssp BHHHHHHHHHHHHHHHCTTSEEECCC---BCTTCCHHHHHHHHBGGGTSSBCCCCCSCCCCBTCSSGGGTHH----HHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEECCc---CcccccccchhhhcccccccccccccCCCCCcccCCCHHHHHH----HHHH
Confidence 35567788999999999999999999 530 00 111222322 2333
Q ss_pred hhccCCCChhhHHHHHHHHHHHhHHHHhC
Q 004052 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (776)
Q Consensus 351 ~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (776)
+.+.| ++. +.+++|+++|+.|+|+
T Consensus 297 L~~~G-~se----~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 297 LLKRG-MPE----RVVRKVMGENWVRVLR 320 (325)
T ss_dssp HHHTT-CCH----HHHHHHHTHHHHHHHH
T ss_pred HHHcC-CCH----HHHHHHHHHHHHHHHH
Confidence 44433 563 6799999999999985
No 56
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=93.28 E-value=0.15 Score=54.93 Aligned_cols=71 Identities=7% Similarity=0.063 Sum_probs=46.7
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCC--CccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHH
Q 004052 300 SVQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (776)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~--~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rl 377 (776)
+.+.+.+.+..+.+++|.+.|-+|||--. .|.. +.....+. +++.++.+.| ++. +.+++|+++|..|+
T Consensus 281 tl~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~g-l~d~s~~p----~L~~~L~~rG-~se----~~i~ki~g~N~lRv 350 (364)
T 3ly0_A 281 GWEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQG-IADVTGLP----ALQAAMRAHG-YDE----PLMRKLCHENWYGL 350 (364)
T ss_dssp CSHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTT-TCSGGGHH----HHHHHHHHHT-CCH----HHHHHHHTHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCC-CCCHHHHH----HHHHHHHHCC-CCH----HHHHHHHhHhHHHH
Confidence 34567889999999999999999999221 1211 11122222 2333444444 563 67999999999999
Q ss_pred hCC
Q 004052 378 YKI 380 (776)
Q Consensus 378 y~l 380 (776)
|+-
T Consensus 351 l~~ 353 (364)
T 3ly0_A 351 LER 353 (364)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
No 57
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=92.64 E-value=0.49 Score=52.06 Aligned_cols=69 Identities=12% Similarity=0.103 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC--CccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHh
Q 004052 301 VQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (776)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~--~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (776)
.+.+.+++..+.+++|.+.|-+|||--. .|+ -+.....+.. ++.++++.| ++. +.+++|+++|..|++
T Consensus 335 l~~~~~Hidhi~~~~G~dhVGiGsDfDG~~~~~-gl~dvs~~p~----l~~~L~~rG-~se----~di~ki~ggN~lRVl 404 (417)
T 3b40_A 335 LKELVDAIDYTVKKVGIDHVGISSDFNDGGGVD-GWKDVSEIRN----VTAELITRG-YSD----ADIAKLWGGNFLRAW 404 (417)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEECCBTTTCCBB-TBCSGGGHHH----HHHHHHHHT-CCH----HHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEcCCCCCCCCCC-CCCCHHHHHH----HHHHHHhcC-CCH----HHHHHHHHHHHHHHH
Confidence 4566778999999999999999999321 121 1122222333 333444444 563 679999999999998
Q ss_pred C
Q 004052 379 K 379 (776)
Q Consensus 379 ~ 379 (776)
+
T Consensus 405 ~ 405 (417)
T 3b40_A 405 G 405 (417)
T ss_dssp H
T ss_pred H
Confidence 6
No 58
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=92.63 E-value=0.36 Score=52.75 Aligned_cols=71 Identities=11% Similarity=0.090 Sum_probs=47.4
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCC---CccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHH
Q 004052 300 SVQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (776)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~---~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (776)
+.+.+.+++..+.+++|.+.|-+|||--. .|+. +.....+. +++.++.++| ++. +.+++|+++|..|
T Consensus 295 tl~dv~~HIdhi~~l~G~dhVgiGsDfDG~~~~P~g-l~dvs~~p----~L~~~L~~rG-~se----~di~ki~g~N~lR 364 (400)
T 3id7_A 295 TVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDG-LGDVSGYP----NLIAELLDRG-WSQ----SDLAKLTWKNAVR 364 (400)
T ss_dssp BHHHHHHHHHHHHHHHCGGGEEECCCBTTCSCCCBT-CSSTTCHH----HHHHHHHHTT-CCH----HHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEECCCCCCCCCCCCC-CCCHHHHH----HHHHHHhhcC-CCH----HHHHHHHHHhHHH
Confidence 34567789999999999999999999322 2321 11122222 2333444444 663 6799999999999
Q ss_pred HhCC
Q 004052 377 FYKI 380 (776)
Q Consensus 377 ly~l 380 (776)
+++-
T Consensus 365 vl~~ 368 (400)
T 3id7_A 365 VLDA 368 (400)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9964
No 59
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=92.51 E-value=0.46 Score=51.39 Aligned_cols=71 Identities=14% Similarity=0.210 Sum_probs=46.9
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCCC---ccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHH
Q 004052 300 SVQGMISSIKELLELAPTKKVMFSTDAYAS---PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (776)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~~---P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (776)
+.+.+.+++..+.+.+|.+.|.+|||--+. |.. +.....+... +.++.+.| ++. +.+++|+++|..|
T Consensus 263 t~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~g-l~d~~~~p~l----~~~L~~~G-~se----~~i~ki~g~N~lR 332 (369)
T 1itu_A 263 NLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEG-LEDVSKYPDL----IAELLRRN-WTE----AEVKGALADNLLR 332 (369)
T ss_dssp BHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBT-CSSTTCHHHH----HHHHHHTT-CCH----HHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCC-CCCHHHHHHH----HHHHHHcC-CCH----HHHHHHHhHhHHH
Confidence 345677888999999999999999994232 211 1122223332 33334434 563 6799999999999
Q ss_pred HhCC
Q 004052 377 FYKI 380 (776)
Q Consensus 377 ly~l 380 (776)
+++-
T Consensus 333 vl~~ 336 (369)
T 1itu_A 333 VFEA 336 (369)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9964
No 60
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=92.00 E-value=0.99 Score=47.76 Aligned_cols=70 Identities=16% Similarity=0.111 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCC---CccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHH
Q 004052 300 SVQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (776)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~---~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (776)
+.+.+.+.+..+.+++|.+.|-+|||--. .|.. +.....+ -++..++.+ | ++. +.+++|+++|+.|
T Consensus 238 tl~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p~g-l~d~s~~----p~L~~~L~~-g-~se----~~i~ki~g~N~lR 306 (318)
T 3neh_A 238 DTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKG-LEHVGKY----QSFLETLEK-H-YTK----EEIEGFASRNFLN 306 (318)
T ss_dssp BHHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCBBT-BSSGGGH----HHHHHHHTT-T-SCH----HHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCC-CCCHHHH----HHHHHHHHh-c-CCH----HHHHHHHhHhHHH
Confidence 35667889999999999999999999322 1211 1112222 234445555 4 674 6799999999999
Q ss_pred HhCC
Q 004052 377 FYKI 380 (776)
Q Consensus 377 ly~l 380 (776)
+|+-
T Consensus 307 v~~~ 310 (318)
T 3neh_A 307 HLPK 310 (318)
T ss_dssp TCCC
T ss_pred HHhh
Confidence 9864
No 61
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=90.51 E-value=0.51 Score=51.93 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCCC--ccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHh
Q 004052 301 VQGMISSIKELLELAPTKKVMFSTDAYAS--PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (776)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~--P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (776)
.+.+.+++..+.+.+|.+.|-+|||--.. |+. +.....+. +++.++++.| ++. +.+++|+++|..|++
T Consensus 336 l~~~~~Hidhi~~~~G~dhVgiGsDfDG~~~~~g-l~dvs~~p----~L~~~Ll~rG-~se----~di~ki~g~N~lRvl 405 (417)
T 2rag_A 336 FDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDG-FEDITDLP----KITARLKAEG-YSD----ADIEAIWSGNVLRIV 405 (417)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCCTTTTCCBBT-BSSGGGTH----HHHHHHHHTT-CCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEEccCCCCCCCCCC-CCCHHHHH----HHHHHHHHcC-CCH----HHHHHHHHHHHHHHH
Confidence 45667889999999999999999993221 211 11222222 2334444444 563 679999999999998
Q ss_pred C
Q 004052 379 K 379 (776)
Q Consensus 379 ~ 379 (776)
+
T Consensus 406 ~ 406 (417)
T 2rag_A 406 D 406 (417)
T ss_dssp H
T ss_pred H
Confidence 6
No 62
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=89.86 E-value=1.4 Score=52.21 Aligned_cols=134 Identities=14% Similarity=0.050 Sum_probs=78.0
Q ss_pred eeccCCCCCceEEecccch-HHHhhhHHHHHHHHHHHHH-HHcCCeeEecc-c------ccCC-----------------
Q 004052 584 QLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVA-RKHGLLATFVP-K------FALD----------------- 637 (776)
Q Consensus 584 ~~h~E~~pGQ~Ei~l~~~~-~l~aaD~~~~~r~~ik~vA-~~~G~~aTFmp-K------P~~~----------------- 637 (776)
.+.+|..-.|.|+..+++. .-++.+.+...+.++.+.+ ....+-+.=|| . |+..
T Consensus 54 ~i~~d~~es~lE~~Tpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lw~~smp~~l~~~~i~ia~~~~~~~~~Yr~~l~~ry 133 (750)
T 3ln6_A 54 YIQTDYSEPQLELITPIAKDSQEAIRFLKAISDVAGRSINHDEYLWPLSMPPKVREEDIQIAQLEDAFEYDYRKYLEKTY 133 (750)
T ss_dssp SEEESSBSSEEEEECCCBSSHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCSSCCTTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CccchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeecCCCCCCCCCCCcccCCCCCcHHHHHHHHHHh
Confidence 6778999999999999975 6678888888888888775 33333222221 1 2221
Q ss_pred ----CCCccceeeeccccCCccccccC-CC-CCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCCCcccCCCCCCcC-----
Q 004052 638 ----DIGSGSHVHLSLWQNGENVFMAS-DS-SSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWS----- 706 (776)
Q Consensus 638 ----~~GsG~HvH~Sl~~~g~n~f~~~-d~-~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~nSY~Rl~~~~~a----- 706 (776)
+.=+|+|+|+|+-+..-.+++.. +. +...-.|...-..+-+++.+.+-++++++.++-.-+++..+..+
T Consensus 134 g~~~q~i~G~Hvn~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~~r~~w~l~~L~gaSP~~~~~f~~g~~~~~~~S 213 (750)
T 3ln6_A 134 GKLIQSISGIHYNLGLGQELLTSLFELSQADNAIDFQNQLYMKLSQNFLRYRWLLTYLYGASPVAEEDFLDQKLNNPVRS 213 (750)
T ss_dssp CTGGGGCCCEEEEEEECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSCSSCTTTCCCSB
T ss_pred ChhhceeeeEEEEecCChHHHHHHhhccccchHHHHhhhHHHHHHHHHHhHHHHHHHHhhCCccccccccCCCCCCceee
Confidence 11278999999964321111100 00 00001123334567788999999999998876543333222111
Q ss_pred CcccccccCCC
Q 004052 707 GAYQCWGKENR 717 (776)
Q Consensus 707 p~~~~WG~~NR 717 (776)
=....||+.|+
T Consensus 214 ~R~s~~g~~~~ 224 (750)
T 3ln6_A 214 LRNSHLGYVNH 224 (750)
T ss_dssp STTSSSSSCCC
T ss_pred eeccccCCCCC
Confidence 12344777777
No 63
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=88.58 E-value=2.6 Score=45.33 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhH---HHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCee
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLR---AILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~---~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
++..+..+++.++++|.|+.+|.--.+. ...+.-..+. .+++ ++|+.++.+.|.+..-..++..-| .+|
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHaEd~~~---i~~~E~~ai~r~~~la~--~~~g~~lhi~HvSt~~~v~~I~~A---~~V 205 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHGETNDF---VMDRESNFAKIYEKLAK--HFPRLKIVMEHITTKTLCELLKDY---ENL 205 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCSSC---GGGTTGGGHHHHHHHHH--HCTTSCEEECSCCSHHHHHHHHHC---TTE
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCchH---hHHHHHHHHHHHHHHHH--HcCCCcEEEEecCcHHHHHHHHhc---CCc
Confidence 5667889999999999999999874321 1112222333 3455 599999999999754333322222 677
Q ss_pred eecccc
Q 004052 289 YLDFGL 294 (776)
Q Consensus 289 yld~s~ 294 (776)
+.+++.
T Consensus 206 taEv~p 211 (359)
T 3pnu_A 206 YATITL 211 (359)
T ss_dssp EEEECS
T ss_pred eEEEec
Confidence 777764
No 64
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=88.28 E-value=8.4 Score=40.92 Aligned_cols=143 Identities=15% Similarity=0.084 Sum_probs=76.9
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCC---chHHHH-HHHHHhCCe
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY---PFSKEA-SYLAYVYPQ 287 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~---p~~~e~-~~la~~~pN 287 (776)
.+..+..+++.+.++|+|+.+|++-.. ........+....+.+ .+ .+.|+.. +...+. ..++.. +
T Consensus 172 ~~~~l~~~~~~a~~~g~~v~~H~~~~~----~~~~~~~~i~~~~~~G----~~-~i~H~~~~~~~~~~~~~~~~~~~--g 240 (386)
T 2vun_A 172 NPEDAAPMVEWAHKHGFKVQMHTGGTS----IPGSSTVTADDVIKTK----PD-VVSHINGGPTAISVQEVDRIMDE--T 240 (386)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEECSCCS----CSTTCSCCHHHHHHHC----CS-EEETTTCSSSCCCHHHHHHHHHH--C
T ss_pred CHHHHHHHHHHHHHCCCeEEEecCCcc----ccccCHHHHHHHHHcC----CC-EEEEccCCCCCCCHHHHHHHHHc--C
Confidence 455778889999999999999997321 0001122344444532 22 3789754 122333 333332 4
Q ss_pred eee-cccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCC-CCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHH
Q 004052 288 VYL-DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAY-ASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEV 365 (776)
Q Consensus 288 Vyl-d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~-~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~ 365 (776)
+++ .+.. ... .......++++++.+..++++++||++ .++. ++.. .....+.. +++ ..++.. .
T Consensus 241 ~~vl~~~~-~g~--~~~~~~~~~~~~~~g~~d~v~lgTD~p~~~~~--~~~g-~~~~~~~~----~~~-~~ls~~----~ 305 (386)
T 2vun_A 241 DFAMEIVQ-CGN--PKIADYVARRAAEKGQLGRVIFGNDAPSGTGL--IPLG-ILRNMCQI----ASM-SDIDPE----V 305 (386)
T ss_dssp CCEEEEES-SSC--HHHHHHHHHHHHHHTCGGGEEEECCBSBTTBB--CTTH-HHHHHHHH----HHH-SCCCHH----H
T ss_pred CeEEEecc-CCc--ccccHHHHHHHHHcCCCceeEEecCCCCCCCC--Ccch-hHHHHHHH----Hhh-cCCCHH----H
Confidence 444 1100 000 111244678888888888999999963 2111 1111 11222221 122 457753 3
Q ss_pred HHHHHHHhHHHHhCC
Q 004052 366 AKDIFALNAAQFYKI 380 (776)
Q Consensus 366 ~~~Il~~NA~rly~l 380 (776)
+-+++..|++++|++
T Consensus 306 ~~~~~T~n~A~~lgl 320 (386)
T 2vun_A 306 AVCMATGNSTAVYGL 320 (386)
T ss_dssp HHHHHTHHHHHHHTC
T ss_pred HHHHHhHHHHHHcCC
Confidence 556667899999998
No 65
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=87.74 E-value=14 Score=39.22 Aligned_cols=139 Identities=15% Similarity=0.074 Sum_probs=74.3
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeee
Q 004052 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (776)
Q Consensus 211 l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyl 290 (776)
+.+..+..+.+.|.++|+++.+|... ...+...++. -.+ .+.|+.+-...++..++.. ++++
T Consensus 204 ~~~e~l~~~~~~A~~~g~~v~~H~~~-----------~~~i~~~~~~--g~~---~i~H~~~~~~~~~~~~~~~--g~~~ 265 (403)
T 3gnh_A 204 LTYEEMKAVVDEAHMAGIKVAAHAHG-----------ASGIREAVRA--GVD---TIEHASLVDDEGIKLAVQK--GAYF 265 (403)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECS-----------HHHHHHHHHT--TCS---EEEECTTCCHHHHHHHHHH--TCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHh--CCC---EEecCCcCCHHHHHHHHHC--CCEE
Confidence 44556788899999999999999842 1224555552 222 4568754333333444432 4555
Q ss_pred cccccCCC----------ccHH------H----HHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhh
Q 004052 291 DFGLAIPK----------LSVQ------G----MISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRD 350 (776)
Q Consensus 291 d~s~~~~~----------~~~~------g----~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~ 350 (776)
.++..... .... + ....++.+++.+. ++.+|||+...|.... .+.++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~~--~~e~~~-------- 333 (403)
T 3gnh_A 266 SMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGV--KMVYGTDAGIYPHGDN--AKQFAV-------- 333 (403)
T ss_dssp ECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--EEECCCCBTTBCTTCG--GGHHHH--------
T ss_pred EeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--eEEEecCCCCCCCCch--HHHHHH--------
Confidence 54321100 0000 0 1124556666543 8999999755443221 122211
Q ss_pred hhccCCCChhhHHHHHHHHHHHhHHHHhCCCCCc
Q 004052 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (776)
Q Consensus 351 ~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (776)
+++ ..++..+ +=+..-.|++++++++...
T Consensus 334 ~~~-~gl~~~~----al~~aT~~~A~~lg~~~~~ 362 (403)
T 3gnh_A 334 MVR-YGATPLQ----AIQSATLTAAEALGRSKDV 362 (403)
T ss_dssp HHH-TTCCHHH----HHHHTTHHHHHHHTCTTTS
T ss_pred HHH-cCCCHHH----HHHHHHHHHHHHhCCCCCc
Confidence 122 2477543 4455568888899987543
No 66
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=85.82 E-value=4.8 Score=44.13 Aligned_cols=166 Identities=13% Similarity=0.136 Sum_probs=84.4
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCC--------------CCCC-cCCcChh-----hhHHHHHhcCCCCcEEEEeCCC
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHAS 271 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd--------------~~~~-~~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g 271 (776)
.+..+..+++.++++|+|+.+|..-.. .+.. ...+.|. .+..++.-.+.-+.++.+.|.+
T Consensus 167 ~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~H~s 246 (448)
T 3hm7_A 167 HDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHVS 246 (448)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 444567778889999999999985310 0000 0001111 1222222101235788999987
Q ss_pred CchHHHHHHHHHhC-CeeeecccccC------------------CCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc
Q 004052 272 YPFSKEASYLAYVY-PQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET 332 (776)
Q Consensus 272 ~p~~~e~~~la~~~-pNVyld~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~ 332 (776)
.....+....+... -+|+.+++... |..........+.+.+..+.. .+++||..++...
T Consensus 247 ~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~--~~i~tD~~p~~~~ 324 (448)
T 3hm7_A 247 SRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEI--DLISSDHSPSLPQ 324 (448)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCC--CEECCCBCCCCGG
T ss_pred CHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCc--cEEEeCCCCCCHH
Confidence 65544444444332 36777765411 101001112345555554433 5689995433210
Q ss_pred c-----ch----hhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCCC
Q 004052 333 Y-----FL----GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (776)
Q Consensus 333 ~-----~~----~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (776)
. +. +....-..+..++...+..+.++.. .+-+.+..|++++|+++..
T Consensus 325 ~k~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~----~~~~~~t~~~A~~~g~~~~ 380 (448)
T 3hm7_A 325 MKTGKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLT----QIVQLLSTEPAKRFGLYPQ 380 (448)
T ss_dssp GGCCSSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHH----HHHHHHTHHHHHHHTCTTT
T ss_pred HcccCCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHH----HHHHHHhHHHHHHcCCCCC
Confidence 0 00 0000001233445556667788864 4666778999999999543
No 67
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=85.06 E-value=4.8 Score=47.72 Aligned_cols=112 Identities=16% Similarity=0.133 Sum_probs=67.3
Q ss_pred eeccCCCCCceEEecccch-HHHhhhHHHHHHHHHHHHH-HHcCCeeEec----cc----ccCCC---------------
Q 004052 584 QLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVA-RKHGLLATFV----PK----FALDD--------------- 638 (776)
Q Consensus 584 ~~h~E~~pGQ~Ei~l~~~~-~l~aaD~~~~~r~~ik~vA-~~~G~~aTFm----pK----P~~~~--------------- 638 (776)
.+.+|..-.|.|+..+++. .-++-+.+-..+.++.+.+ ....+-+.=| |. |+...
T Consensus 53 ~i~td~ses~lE~iTpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lwp~smp~~l~~~~~ip~a~~~~~~~~~Yr~~L~~r 132 (757)
T 3ln7_A 53 YIQTDFAESQLELITPPTKKLEDTFRWLSVIHEVVQRSLPEEEYIFPLSMPAGLPAEEQIRVAQLDNPEDVAYREYLVKI 132 (757)
T ss_dssp SEECSSSTTEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCTTEECCCSSSCSBCCC---CCCCCCSSHHHHHHHHHHHHH
T ss_pred CCCchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCCCCCCCccccCCCccHHHHHHHHHH
Confidence 5778999999999999975 6677888888888887775 3344322222 11 23210
Q ss_pred ------CCccceeeeccccCCc-cccccC-C-CCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCCC
Q 004052 639 ------IGSGSHVHLSLWQNGE-NVFMAS-D-SSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 695 (776)
Q Consensus 639 ------~GsG~HvH~Sl~~~g~-n~f~~~-d-~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~n 695 (776)
.=+|+|+|+|+-+.-- .++... + .+...-.|...-.-+-+++.+.+-++++++.++-
T Consensus 133 yG~~~q~i~GiH~n~s~~~~~~~~l~~~~~~~~~~~~~~~~~Y~~l~r~~~r~~wll~yL~gaSP~ 198 (757)
T 3ln7_A 133 YGKNKQMVSGIHYNFQLSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNFLRYQWILLYLLAATPT 198 (757)
T ss_dssp HCSHHHHCCCCEEEEEECHHHHHHHHHHCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred hchhhceeeeEEEEEecChHHHHHHhhhcccchhHHHHHhHHHHHHHHhhHhHHHHHHHHhhCCcc
Confidence 1278999999954211 111100 0 0000011223334577788899999999887764
No 68
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=84.97 E-value=3.7 Score=44.45 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCC
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGF 236 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~ 236 (776)
.+..+..+++.+.++|+|+.+|..-
T Consensus 153 ~~~~l~~~~~~a~~~g~~v~~H~~~ 177 (426)
T 2z00_A 153 DAGVLAAGLLMAAPLGLPVAVHAED 177 (426)
T ss_dssp CHHHHHHHHHHHGGGTCCEEECCCC
T ss_pred CHHHHHHHHHHHHhhCCEEEEeCCC
Confidence 3446677889999999999999863
No 69
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=77.21 E-value=8.8 Score=41.73 Aligned_cols=164 Identities=12% Similarity=0.058 Sum_probs=82.7
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCC---CC--------Cc-CCcChh-----hhHHHHHhcCCCCcEEEEeCCCCch
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDK---DL--------DL-RLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~---~~--------~~-~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~p~ 274 (776)
.+..+..+++.++++|+|+.+|..-.+. +. .+ ..+.|. .+...+.-.+..+.++.+.|.+...
T Consensus 157 ~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~H~s~~~ 236 (428)
T 3mpg_A 157 DASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKG 236 (428)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHH
T ss_pred CHHHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHH
Confidence 3445677889999999999999864210 00 00 011221 1222211112456789999997654
Q ss_pred HHHHHHHHHhC-Ceeeeccccc---------------C---CCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccc--
Q 004052 275 SKEASYLAYVY-PQVYLDFGLA---------------I---PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETY-- 333 (776)
Q Consensus 275 ~~e~~~la~~~-pNVyld~s~~---------------~---~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~-- 333 (776)
..+....+... -+|+.+++.. + |......-...+.+.+..+..+ +.+||..+++...
T Consensus 237 ~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~--~i~tDh~p~~~~~k~ 314 (428)
T 3mpg_A 237 SVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTID--MIATDHAPHTAEEKA 314 (428)
T ss_dssp HHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSC--CBCCCBCCCCTTGGG
T ss_pred HHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCc--EEEcCCCCCCHHHcc
Confidence 44444444322 2565544321 0 1111111233555566555434 6899964432100
Q ss_pred ------chhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCC
Q 004052 334 ------FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 334 ------~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (776)
+.+.......+..++..++..+.++..+ +-+.+..|++++|+++
T Consensus 315 ~~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~ 364 (428)
T 3mpg_A 315 QGIERAPFGITGFETAFPLLYTNLVKKGIITLEQ----LIQFLTEKPADTFGLE 364 (428)
T ss_dssp SCTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHH----HHHTTTHHHHHHHTCS
T ss_pred cCHhhCCCCceehhhHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCCC
Confidence 0000000012334455667778888643 4455568999999986
No 70
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=76.37 E-value=13 Score=41.18 Aligned_cols=164 Identities=16% Similarity=0.163 Sum_probs=81.0
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCC--------------CCCC-cCCcChh-----hhHHHHHhcCCCCcEEEEeCCC
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHAS 271 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd--------------~~~~-~~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g 271 (776)
++..+..+++.++++|+++.+|..-.+ .+.. ...+.|. .+..++.-.+.-+.++.+.|.+
T Consensus 185 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvs 264 (473)
T 3e74_A 185 NDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVS 264 (473)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCC
T ss_pred CHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 344567778888999999999975310 0000 0012221 1222222111235889999987
Q ss_pred CchHHHHHHHHHh-CCeeeeccccc------------------CCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc
Q 004052 272 YPFSKEASYLAYV-YPQVYLDFGLA------------------IPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET 332 (776)
Q Consensus 272 ~p~~~e~~~la~~-~pNVyld~s~~------------------~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~ 332 (776)
.....+....++. -.+|+.+++.. .|.+....-+..+.+.++.+ ....++||..++...
T Consensus 265 t~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G--~~~~i~tDh~p~~~~ 342 (473)
T 3e74_A 265 SPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNG--EIDCLVSDHSPCPPE 342 (473)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTT--CCCEECCCBCCCCTT
T ss_pred CHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCC--CCcEEEeCCCCCCHH
Confidence 6544444443432 23677666541 11111111123444444433 234699996544311
Q ss_pred -----c---chhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCC
Q 004052 333 -----Y---FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 333 -----~---~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (776)
+ +.+....-..+..++.+.+.++.++..+ +-..+-.|++++|+++
T Consensus 343 ~k~~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~ 395 (473)
T 3e74_A 343 MKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPM----FGKLMATNAADIFGLQ 395 (473)
T ss_dssp TTCSCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHH----HHHHHTHHHHHHTTCT
T ss_pred HcccChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCCC
Confidence 0 0000001112333344566778898743 4445568888999986
No 71
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=75.90 E-value=7.3 Score=42.45 Aligned_cols=163 Identities=11% Similarity=0.034 Sum_probs=83.0
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCC---CC--------C-cCCcChh-----hhHHHHHhcCCCCcEEEEeCCCCch
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDK---DL--------D-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~---~~--------~-~~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~p~ 274 (776)
.+..+..+++.++++|+|+++|..-.+. +. . ...+.|. .+...+.-.+..++++.+.|.+...
T Consensus 156 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~s~~~ 235 (424)
T 3gri_A 156 TASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKE 235 (424)
T ss_dssp SHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHH
T ss_pred CHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHH
Confidence 3446777889999999999999864310 00 0 0011221 1111211113457899999997655
Q ss_pred HHHHHHHHHhC-CeeeecccccC------------------CCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc---
Q 004052 275 SKEASYLAYVY-PQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET--- 332 (776)
Q Consensus 275 ~~e~~~la~~~-pNVyld~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~--- 332 (776)
..+....++.. -+|+.+++... |......-...+.+.+..+-.+ +++||.-++...
T Consensus 236 ~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~--~igtDhap~~~~~k~ 313 (424)
T 3gri_A 236 SVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTID--CIATDHAPHARDEKA 313 (424)
T ss_dssp HHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSC--EECCCBCCCCHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCce--EEEcCCCCCCHHHcc
Confidence 54444444332 25665554310 1111111233455555544333 689996333210
Q ss_pred -----cchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCC
Q 004052 333 -----YFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (776)
Q Consensus 333 -----~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (776)
.+.+..-.-..+..++..++.++.++..+ +-..+..|++++|++
T Consensus 314 ~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~ 362 (424)
T 3gri_A 314 QPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQ----LVDYLTIKPCETFNL 362 (424)
T ss_dssp SCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHH----HHHHHTHHHHHHTTC
T ss_pred CCHhHCCCCCccccccHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCC
Confidence 00000000112333455667778898743 444556889999998
No 72
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=75.78 E-value=3.4 Score=46.58 Aligned_cols=109 Identities=10% Similarity=-0.076 Sum_probs=63.8
Q ss_pred eeccCCCCCceEEecccc-hHHHhhhHHHHHHHHHHHHHHHcCCee--Eecc----c----ccCCC--------------
Q 004052 584 QLHAEAGKGQFEIALGHT-VAAKAADNLIFTREVLRAVARKHGLLA--TFVP----K----FALDD-------------- 638 (776)
Q Consensus 584 ~~h~E~~pGQ~Ei~l~~~-~~l~aaD~~~~~r~~ik~vA~~~G~~a--TFmp----K----P~~~~-------------- 638 (776)
.+.+|..-.|.|+..+++ +.-++.+.+-..+..+.+.+. |... .=|| . |++..
T Consensus 56 ~IttDfsEsqlE~iTpv~~s~~eal~~L~~l~~~v~~~l~--~e~Lwp~SmP~~l~~~~~IpiA~yg~s~~g~~k~~Yr~ 133 (518)
T 1va6_A 56 WITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMG--DERMWPLSMPSYIAEGQDIELAQYGTSNTGRFKTLYRE 133 (518)
T ss_dssp SEEECSBTTEEEEECCCBSCHHHHHHHHHHHHHHHHTSST--TCEECCSSSCSSCCTTCCCCBCCCCSSHHHHHHHHHHH
T ss_pred CcCCCcchhheeecCCCCCCHHHHHHHHHHHHHHHHHHcC--CCeEeecCCCCCCCCCCCCccccccccccCccchHHHH
Confidence 467799999999999997 455677888888777777773 3322 1111 1 22211
Q ss_pred -----------CCccceeeeccccCC-ccccccCC-CCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCC
Q 004052 639 -----------IGSGSHVHLSLWQNG-ENVFMASD-SSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (776)
Q Consensus 639 -----------~GsG~HvH~Sl~~~g-~n~f~~~d-~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~ 694 (776)
.=+|+|+|+|+-+.= ..++...+ .+...-.|...-.-+-+++.+.+-|+++++.++
T Consensus 134 ~L~~rYG~~~q~IsGiH~N~s~~d~l~~~l~~~~~~~~~~~~~~~~y~~lirn~~r~~wlL~yLfgASP 202 (518)
T 1va6_A 134 GLKNRYGALMQTISGVHYNFSLPMAFWQAKSGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASP 202 (518)
T ss_dssp HHHHHHCHHHHTCCEEEEEEECCHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCBS
T ss_pred HHHHHhCcchheeeeEEEEEecCHHHHHHHHhhccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 127899999995320 00110000 000001122333445588999999999998887
No 73
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=68.15 E-value=14 Score=40.04 Aligned_cols=158 Identities=18% Similarity=0.125 Sum_probs=75.5
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCC----cCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCe
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ 287 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pN 287 (776)
....+..+++.|.++|+|+.+|......... ..-..+ +..+.+. ...+-+.++.|+.+....++..++.. +
T Consensus 198 ~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~~~~~--g 272 (447)
T 4f0r_A 198 SDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRP--LARLQRL-GLLSPRLVAAHMVHLNDAEVELAARH--G 272 (447)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHH--T
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHc--C
Confidence 4446778889999999999999964210000 000111 1112222 34566788899865444444555543 3
Q ss_pred eeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhh--ccCCCChhhHHHH
Q 004052 288 VYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEV 365 (776)
Q Consensus 288 Vyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~ea~~~ 365 (776)
+++..+...+.....+. ..++.+++.+ -++.+|||+...+.. ......++.. ..+.... ....++.. .
T Consensus 273 ~~~~~~p~~~~~~~~~~-~~~~~~~~~G--v~v~lgTD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~----~ 342 (447)
T 4f0r_A 273 LSTAHNPASNMKLASGI-SPVSKLMDAG--VAVGIGTDGAASNNK-LDMLAETRLA--ALLAKVGTLDPTSVPAA----A 342 (447)
T ss_dssp CEEEECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCGGGTCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHH----H
T ss_pred CEEEECchhhhhcCCCC-CcHHHHHHCC--CcEEEeCCCCcCCCC-CCHHHHHHHH--HHHhhhhccCCCCCCHH----H
Confidence 44332211100000010 1244555533 278899995432110 0111112111 1112211 23457753 3
Q ss_pred HHHHHHHhHHHHhCCCCCc
Q 004052 366 AKDIFALNAAQFYKINLGV 384 (776)
Q Consensus 366 ~~~Il~~NA~rly~l~~~~ 384 (776)
+-+.+-.|++++++++...
T Consensus 343 al~~~T~n~A~~lg~~~~~ 361 (447)
T 4f0r_A 343 AIRMATLNGARALGIADKV 361 (447)
T ss_dssp HHHHHTHHHHHHTTCTTTS
T ss_pred HHHHHHHHHHHHhCCCCCc
Confidence 4445568899999987543
No 74
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=67.95 E-value=47 Score=38.13 Aligned_cols=136 Identities=15% Similarity=-0.012 Sum_probs=75.0
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeec
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld 291 (776)
.+..+...++.+.++|+||.+|.... ....|..+.+ .- +.. .|+.... .++..... ..+|+.
T Consensus 200 ~d~~l~~~l~~A~~~g~pV~~Ha~~~---------~~~~L~~~~~--aG--v~~--~H~~~~~-eea~e~l~--~G~~i~ 261 (608)
T 3nqb_A 200 RDPRMSGIVQAGLAAEKLVCGHARGL---------KNADLNAFMA--AG--VSS--DHELVSG-EDLMAKLR--AGLTIE 261 (608)
T ss_dssp TCHHHHHHHHHHHHHTCEEEECCTTC---------CHHHHHHHHH--TT--CCE--ECCCCSH-HHHHHHHH--TTCEEE
T ss_pred CcHHHHHHHHHHHHcCCEEEEcCCCC---------CHHHHHHHHH--cC--CCe--eeccCCH-HHHHHHHH--CCCEEE
Confidence 45567788899999999999997521 2233555555 22 222 6875543 44444443 256666
Q ss_pred ccccCCCccHHHHHHHHHHHHH--HCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHH
Q 004052 292 FGLAIPKLSVQGMISSIKELLE--LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDI 369 (776)
Q Consensus 292 ~s~~~~~~~~~g~~~~l~~~le--~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~I 369 (776)
+... .. . . ...+..++. ..+..+++++||+. .|...+ ..... ...+...++. .++. +.+-+.
T Consensus 262 i~gs-~~--~-~-~~~l~~~i~~~~~~g~~v~lgTD~~-~p~~~~-~~g~l----~~~v~~~~~~-Gls~----~eal~~ 325 (608)
T 3nqb_A 262 LRGS-HD--H-L-LPEFVAALNTLGHLPQTVTLCTDDV-FPDDLL-QGGGL----DDVVRRLVRY-GLKP----EWALRA 325 (608)
T ss_dssp EESS-SG--G-G-HHHHHHHHHHHTSCCTTEEEECBSC-CHHHHH-HTCSH----HHHHHHHHHT-TCCH----HHHHHH
T ss_pred Eecc-cc--c-c-HHHHHHHHHhHhhcCceEEEecCCC-CCcchh-hhcch----HHHHHHHHHc-CCCH----HHHHHH
Confidence 5521 11 1 1 223444444 44669999999952 232111 10011 1222233333 4665 346667
Q ss_pred HHHhHHHHhCCC
Q 004052 370 FALNAAQFYKIN 381 (776)
Q Consensus 370 l~~NA~rly~l~ 381 (776)
...|++++|+++
T Consensus 326 aT~n~A~~lgl~ 337 (608)
T 3nqb_A 326 ATLNAAQRLGRS 337 (608)
T ss_dssp HTHHHHHHHTCT
T ss_pred HHHHHHHHcCCC
Confidence 779999999994
No 75
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=67.32 E-value=44 Score=34.97 Aligned_cols=137 Identities=17% Similarity=0.184 Sum_probs=69.5
Q ss_pred HHHHHHHHHhh-CCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCC--c---------hHHHHHHHH
Q 004052 215 IFISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY--P---------FSKEASYLA 282 (776)
Q Consensus 215 ~l~~l~e~a~e-~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~--p---------~~~e~~~la 282 (776)
.+..+++.+.+ +|+|+.+|.+.++. ....+..+++ + . . ++.|+.. + ...+....+
T Consensus 169 ~~~~~~~~a~~~~g~~v~~H~~~~~~-------~~~~~~~~~~--~-g--~-~~~H~~~~~~~~~~~~s~~~~~~~~~~~ 235 (379)
T 2ics_A 169 PLELAKQIQQENQEIPLMVHIGSAPP-------HLDEILALME--K-G--D-VLTHCFNGKENGILDQATDKIKDFAWQA 235 (379)
T ss_dssp HHHHHHHHHHTTTTCCEEEEECSSSS-------CHHHHHHHCC--T-T--C-EEESTTCCSTTSSEETTTTEECHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEeCCCCcc-------hHHHHHHHhh--c-C--C-eeeeccCCCccchhhccCHHHHHHHHHH
Confidence 34556788999 99999999974321 1112222333 2 1 2 4567621 1 000222222
Q ss_pred HhCCeeeecccccCCCccHHHHHHHHHHHHHHC-CCCcEEEecCCCCCccccchh-hHHHHHHHHHHhhhhhccCCCChh
Q 004052 283 YVYPQVYLDFGLAIPKLSVQGMISSIKELLELA-PTKKVMFSTDAYASPETYFLG-AKRAREVVFSVLRDTCIDEDLSVG 360 (776)
Q Consensus 283 ~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~-~~~kilfgSD~~~~P~~~~~~-~~~~r~~l~~~l~~~v~~g~l~~~ 360 (776)
. ..++|++++...... + ...++++++.+ +.+ +++||+. +...+.. ...+...+ ..+++. .++.
T Consensus 236 ~-~~g~~~~~~p~~~~~---~-~~~~~~~~~~G~~~~--~l~TD~~--~~~~~~~~~~~~~~~l----~~~~~~-~ls~- 300 (379)
T 2ics_A 236 Y-NKGVVFDIGHGTDSF---N-FHVAETALREGMKAA--SISTDIY--IRNRENGPVYDLATTM----EKLRVV-GYDW- 300 (379)
T ss_dssp H-HTTCEEECCCTTTSC---C-HHHHHHHHHTTCCCS--BCCCCBC--HHHHHSSSCCCHHHHH----HHHHHH-TCCH-
T ss_pred H-HcCCEEEecCCCCCc---C-HHHHHHHHHcCCCcc--eEeccCc--ccCCCCCcHhHHHHHH----HHHHHc-CCCH-
Confidence 2 246888775322211 1 23466777764 545 8999953 1100000 00111222 222222 4775
Q ss_pred hHHHHHHHHHHHhHHHHhCCCC
Q 004052 361 EAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 361 ea~~~~~~Il~~NA~rly~l~~ 382 (776)
+.+-+.+..|++|+|+++.
T Consensus 301 ---~~~~~~~T~n~A~~lgl~~ 319 (379)
T 2ics_A 301 ---PEIIEKVTKAPAENFHLTQ 319 (379)
T ss_dssp ---HHHHHTTTHHHHHHTTCTT
T ss_pred ---HHHHHHHHHHHHHHhCCCC
Confidence 3466777899999999864
No 76
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=66.26 E-value=60 Score=35.43 Aligned_cols=165 Identities=15% Similarity=0.093 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCC--------------CCCCc-CCcChh-----hhHHHHHhcCCCCcEEEEeCCC
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLDL-RLSNPL-----HLRAILEDKRFSKCRFVLLHAS 271 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd--------------~~~~~-~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g 271 (776)
.+..+..+++.++++|+++.+|.-..+ .+... ..+.|. .+...+.-.+..+.++.+.|.+
T Consensus 162 ~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~s 241 (461)
T 3sfw_A 162 DDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHVS 241 (461)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 344566778888999999999964210 00000 001221 1222222112457899999987
Q ss_pred CchHHHHHHHHHhC-Ceeeeccccc---------------------CCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCC
Q 004052 272 YPFSKEASYLAYVY-PQVYLDFGLA---------------------IPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS 329 (776)
Q Consensus 272 ~p~~~e~~~la~~~-pNVyld~s~~---------------------~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~ 329 (776)
..-..+....++.. .+|+.+++.. .|.+....-...|.+.++.+ ...+++||..++
T Consensus 242 ~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G--~~~~i~sD~~p~ 319 (461)
T 3sfw_A 242 CADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNG--ILQTVGSDHCPF 319 (461)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTT--SSCEECCCBCCC
T ss_pred cHHHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcC--CceEEECCCCCC
Confidence 64444444444332 3565554331 01110011123445555433 335789996544
Q ss_pred c-cc-------cc----hhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 330 P-ET-------YF----LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 330 P-~~-------~~----~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
. +. .+ .+....-..+..++...+..+.++..+ +-..+..|++++++++.
T Consensus 320 ~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~~ 380 (461)
T 3sfw_A 320 NFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQ----FVDITSTKVAKLFGMFP 380 (461)
T ss_dssp CTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHH----HHHHHTHHHHHHHTCTT
T ss_pred CchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHcCCCC
Confidence 3 10 00 000000112334455677778898743 45556688999999854
No 77
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=65.13 E-value=1.3e+02 Score=33.02 Aligned_cols=158 Identities=16% Similarity=0.119 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCC----cC--CcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhC
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LR--LSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVY 285 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~----~~--~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~ 285 (776)
.+..+..+.+.|.++|+++++|..-...... .. ...| + +.+.+....+-+.++.|+-+--..+...++..-
T Consensus 241 s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~--~-~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g 317 (476)
T 4aql_A 241 SETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNY--T-SVYDKNNLLTNKTVMAHGCYLSAEELNVFHERG 317 (476)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSH--H-HHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCH--H-HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcC
Confidence 3456778889999999999999864210000 00 0122 1 222211233456788998654445555555432
Q ss_pred CeeeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHH--HHHhhh-hhccCCCChhhH
Q 004052 286 PQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVV--FSVLRD-TCIDEDLSVGEA 362 (776)
Q Consensus 286 pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l--~~~l~~-~v~~g~l~~~ea 362 (776)
-.|-..+.. +.....|. ..++.+++.+ -++.+|||+....... -...+|... .+.+.. ......++..
T Consensus 318 ~~v~~~P~s--n~~l~~g~-~p~~~~~~~G--v~v~lGtD~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~l~~~-- 388 (476)
T 4aql_A 318 ASIAHCPNS--NLSLSSGF-LNVLEVLKHE--VKIGLGTDVAGGYSYS--MLDAIRRAVMVSNILLINKVNEKSLTLK-- 388 (476)
T ss_dssp CEEEECHHH--HHHTTCCC-CCHHHHHHTT--CEEEECCCTTTSSCCC--HHHHHHHHHHHHHHHHHTTSSSSCCCHH--
T ss_pred CEEEECchh--hhhhCcch-HHHHHHHHCC--CcEEEeCCCCCCCCCC--HHHHHHHHHHHHhhhhcccCCCCcCCHH--
Confidence 222111110 00000010 1234555543 3778999964321111 111222221 111111 0122457753
Q ss_pred HHHHHHHHHHhHHHHhCCCCC
Q 004052 363 IEVAKDIFALNAAQFYKINLG 383 (776)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~~~ 383 (776)
+..++.. .|+++.++++..
T Consensus 389 -~al~~aT-~~~A~~lgl~~~ 407 (476)
T 4aql_A 389 -EVFRLAT-LGGSQALGLDGE 407 (476)
T ss_dssp -HHHHHHT-HHHHHHTTCTTT
T ss_pred -HHHHHHH-HHHHHHhCCCCC
Confidence 3455444 677778888654
No 78
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=62.30 E-value=96 Score=32.94 Aligned_cols=138 Identities=11% Similarity=0.085 Sum_probs=70.8
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeee
Q 004052 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (776)
Q Consensus 211 l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyl 290 (776)
+.+..+..+++.|.++|+++.+|.. + ..-+..+++.+. -.+.|+..-....+..++.. ++++
T Consensus 213 ~~~~~l~~~~~~A~~~g~~v~~H~~-~----------~~~i~~~~~~g~-----~~i~H~~~~~~~~i~~l~~~--gv~v 274 (418)
T 2qs8_A 213 FTQEEVDAVVSAAKDYGMWVAVHAH-G----------AEGMKRAIKAGV-----DSIEHGTFMDLEAMDLMIEN--GTYY 274 (418)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEC-S----------HHHHHHHHHHTC-----SEEEECTTCCHHHHHHHHHH--TCEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEC-C----------HHHHHHHHHcCC-----CEEEECCCCCHHHHHHHHHC--CCEE
Confidence 3445677888999999999999985 1 112444444221 24578754333333333332 4554
Q ss_pred ccccc-------------CCCcc--HH------HHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhh
Q 004052 291 DFGLA-------------IPKLS--VQ------GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLR 349 (776)
Q Consensus 291 d~s~~-------------~~~~~--~~------g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~ 349 (776)
.+... ++... .. .....++.+++.+. ++.+|||+...|... .+++ +..
T Consensus 275 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~-----~~~e-~~~--- 343 (418)
T 2qs8_A 275 VPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGV--KIAFGTDAGVQKHGT-----NWKE-FVY--- 343 (418)
T ss_dssp ECCHHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTC--CBCCCCCBTTBCTTC-----TTHH-HHH---
T ss_pred eeeechHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEeCCCCcCCcch-----HHHH-HHH---
Confidence 43310 11100 00 00134667777553 688999965433211 1111 111
Q ss_pred hhhccCCCChhhHHHHHHHHHHHhHHHHhCCCCC
Q 004052 350 DTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (776)
Q Consensus 350 ~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (776)
+++. .++..+ +=+.+-.|++++++++..
T Consensus 344 -~~~~-gls~~e----al~~~T~n~A~~lg~~~~ 371 (418)
T 2qs8_A 344 -MVEN-GMPAMK----AIQSATMETAKLLRIEDK 371 (418)
T ss_dssp -HHHT-TCCHHH----HHHHTTHHHHHHTTCTTT
T ss_pred -HHHc-CCCHHH----HHHHHHHHHHHHhCCCCC
Confidence 1222 477543 334455788889998643
No 79
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=61.32 E-value=51 Score=35.08 Aligned_cols=138 Identities=12% Similarity=0.003 Sum_probs=70.9
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeee
Q 004052 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (776)
Q Consensus 211 l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyl 290 (776)
+.+..+..+++.|.++|+++.+|.. + ..-+...++.+. + .+.|+..........++.. ++++
T Consensus 209 ~~~e~l~~~~~~A~~~g~~v~~H~~-~----------~~~i~~~l~~g~--~---~i~H~~~~~~~~~~~l~~~--gv~~ 270 (423)
T 3feq_A 209 YSEDEIRAIVDEAEAANTYVMAHAY-T----------GRAIARAVRCGV--R---TIEHGNLVDEAAAKLMHEH--GAFV 270 (423)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEE-E----------HHHHHHHHHHTC--C---EEEEEEECCHHHHHHHHHH--TCEE
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeC-C----------hHHHHHHHHcCC--C---EEeccCcCCHHHHHHHHHC--CCcc
Confidence 4455678889999999999999986 2 122444455322 1 3457632222223333332 4555
Q ss_pred ccc--------------ccCCCc-cH-----HHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhh
Q 004052 291 DFG--------------LAIPKL-SV-----QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRD 350 (776)
Q Consensus 291 d~s--------------~~~~~~-~~-----~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~ 350 (776)
... .+.+.. .. ......++.+++.+. ++.+|||+...|.. ...++ +. .
T Consensus 271 ~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv--~v~~gTD~~~~~~~-----~~~~e-~~-~--- 338 (423)
T 3feq_A 271 VPTLVTYDALAKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGV--KMGFGSDLLGEMHA-----FQSGE-FR-I--- 338 (423)
T ss_dssp ECCTHHHHHHHHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTC--CBCCCCCCCGGGGG-----GTTHH-HH-H---
T ss_pred ccchHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEECCCCCCCCCc-----chHHH-HH-H---
Confidence 222 011110 00 012335666776653 78899996533321 11111 11 1
Q ss_pred hhccCCCChhhHHHHHHHHHHHhHHHHhCCCCCc
Q 004052 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (776)
Q Consensus 351 ~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (776)
+ .++ ++..+ +=+.+-.|++++++++...
T Consensus 339 ~-~~~-ls~~e----al~~aT~~~A~~lg~~~~~ 366 (423)
T 3feq_A 339 R-AEV-LGNLE----ALRSATTVAAEIVNMQGQL 366 (423)
T ss_dssp H-HTT-SCHHH----HHHTTTHHHHHHTTCBTTB
T ss_pred H-Hhh-CCHHH----HHHHHHHHHHHHhCCCCCc
Confidence 1 223 77643 3344567889999986543
No 80
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=60.44 E-value=59 Score=35.80 Aligned_cols=58 Identities=9% Similarity=0.011 Sum_probs=33.6
Q ss_pred CcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhc-cCCCChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 318 KKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 318 ~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~-~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
...++|||+........++. --.+..++..+++ .+.++..+ .++ .+-.|++++++++.
T Consensus 358 ~~~~~gsD~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~---~~~-~~t~~~a~~~g~~~ 416 (480)
T 3gip_A 358 PCCMVGSDGLPNDARPHPRL---WGSFTRVLGRYVREARLMTLEQ---AVA-RMTALPARVFGFAE 416 (480)
T ss_dssp TTEEECCCCCTTCSSCCTHH---HHHHHHHHHCCCCCTCSSCHHH---HHH-HHTHHHHHHHTCTT
T ss_pred CCeEEecCCcccCCCCChhh---hhhHHHHHHHHhhhcCCCCHHH---HHH-HHHHHHHHHcCCCC
Confidence 45778999744322111111 1234556777787 47788743 444 45568888889853
No 81
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=59.31 E-value=59 Score=36.05 Aligned_cols=160 Identities=18% Similarity=0.132 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCC--------------CCCC-cCCcChh-----hhHHHHHhcCCCCcEEEEeCCCC
Q 004052 213 DYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASY 272 (776)
Q Consensus 213 d~~l~~l~e~a~e~glPvq~H~G~gd--------------~~~~-~~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~ 272 (776)
+..+..+++.+.++|+++++|.--.+ .+.. ...+.|. .+...+.--+.-+.++.+.|.+.
T Consensus 160 ~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~HvSt 239 (490)
T 3dc8_A 160 DDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTSC 239 (490)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESSCCS
T ss_pred HHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCC
Confidence 33456677888889999999954210 0000 0012221 11111110013368899999875
Q ss_pred chHHHHHHHHHhC-CeeeecccccC----------------------CCccHHHHHHHHHHHHHHCCCCcEEEecCCCCC
Q 004052 273 PFSKEASYLAYVY-PQVYLDFGLAI----------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYAS 329 (776)
Q Consensus 273 p~~~e~~~la~~~-pNVyld~s~~~----------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~ 329 (776)
.-..+....++.. -+|+.+++... |.+....-+..|.+.+..+..+ +++||.-++
T Consensus 240 ~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id--~i~sDh~p~ 317 (490)
T 3dc8_A 240 EQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQ--VVATDHCAF 317 (490)
T ss_dssp HHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSC--CCBCCBCCC
T ss_pred HHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCce--EEECCCCCC
Confidence 5444444444332 35666554310 1010011133455555544333 589995433
Q ss_pred ccccchhhHH---------------HHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 330 PETYFLGAKR---------------AREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 330 P~~~~~~~~~---------------~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
.. ..+. ....+..++...+..+.+++.+ +-..+..|++++|++..
T Consensus 318 ~~----~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~----~~~~~t~~~A~~~gl~~ 377 (490)
T 3dc8_A 318 TT----EQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNE----FVAVTSTNIAKILNIYP 377 (490)
T ss_dssp CH----HHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHH----HHHHHTHHHHHHTTCTT
T ss_pred CH----HHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHH----HHHHHHHHHHHHhCCCC
Confidence 21 0110 0112333455557788899743 44556689999999953
No 82
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=55.30 E-value=1.6e+02 Score=31.88 Aligned_cols=156 Identities=16% Similarity=0.101 Sum_probs=71.6
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCCCC----CcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeee
Q 004052 214 YIFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (776)
Q Consensus 214 ~~l~~l~e~a~e~glPvq~H~G~gd~~~----~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVy 289 (776)
..+..+++.|.++|+++.+|........ ...-..| +..+.+. ...+-++++.|+.+--..+...++..--.+-
T Consensus 209 ~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~ 285 (472)
T 4dzh_A 209 ANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRP--LARLDRL-GLVNDRLIAVHMTQLTEAEIHLCAERGVSVV 285 (472)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHHcCCEEE
Confidence 3566778889999999999986421000 0000112 2222222 2334567889986544444555554322222
Q ss_pred ecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhh--ccCCCChhhHHHHHH
Q 004052 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAK 367 (776)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~ea~~~~~ 367 (776)
......... ..+. ..++.+++.+ -++.+|||+..... .......++... .+.... ....++.. +..+
T Consensus 286 ~~p~s~~~~--~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~-~~~~~~~~~~a~--~~~~~~~~~~~~l~~~---~al~ 354 (472)
T 4dzh_A 286 HCPESNLKL--ASGF-CPACALQRAS--VNLAIGTDGCASNN-DLDMFSENRTAA--ILAKAVANDATALDAA---TTLR 354 (472)
T ss_dssp ECHHHHHHT--TCCC-CCHHHHHHTT--CEEEECCCCTTSSC-CCCHHHHHHHHH--HHHHHHHTCTTSSCHH---HHHH
T ss_pred EChHHHHhc--CCCC-ccHHHHHHCC--CCEEEECCCCcCCC-CCCHHHHHHHHH--HHhhhhcCCCCcCCHH---HHHH
Confidence 211100000 0010 1244555543 27889999653210 011111122111 111111 22347753 3455
Q ss_pred HHHHHhHHHHhCCCCCc
Q 004052 368 DIFALNAAQFYKINLGV 384 (776)
Q Consensus 368 ~Il~~NA~rly~l~~~~ 384 (776)
+.. .|+++.++++...
T Consensus 355 ~~T-~~~A~~lgl~~~~ 370 (472)
T 4dzh_A 355 AAT-LGGARALGFGDRI 370 (472)
T ss_dssp HHT-HHHHHHTTCTTTS
T ss_pred HHH-HHHHHHcCCCCCC
Confidence 444 6888898986543
No 83
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=55.02 E-value=29 Score=31.57 Aligned_cols=91 Identities=16% Similarity=0.120 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhcCceeEEeeeeEEEEEeecccCCCCCccccCCCCcccCCccccchHHHHHHHHHHHhCCCCeeeec---
Q 004052 510 LRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLH--- 586 (776)
Q Consensus 510 L~~~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h--- 586 (776)
=+++++.+++ .|..+..-.++||++.=+ -.+-++.++..+.+.|..|+..-
T Consensus 21 n~~Vl~~L~e-~Gddl~~~r~IEH~~~F~-------------------------de~~~e~~a~~~~~~Gy~v~~~~~~e 74 (132)
T 1nxi_A 21 TRDIIQALLE-DGSDPDALYEIEHHLFAE-------------------------DFDKLEKAAVEAFKMGFEVLEAEETE 74 (132)
T ss_dssp HHHHHHHHHH-HTCCTTSCEEEEEEEEES-------------------------CHHHHHHHHHHHHHHTCCCBCCCCBC
T ss_pred HHHHHHHHHh-CCCCcCCCeEEEEEEEeC-------------------------CHHHHHHHHHHHHHCCCEEEeccccc
Confidence 3567777874 599999999999998744 13455667777788898886322
Q ss_pred cCCCCCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCe
Q 004052 587 AEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLL 627 (776)
Q Consensus 587 ~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~ 627 (776)
.|.+-..|++.+.....+...+-.-...++++ +|+++|-.
T Consensus 75 ~e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~-lA~~~~G~ 114 (132)
T 1nxi_A 75 DEDGNKLLCFDATMQSALDAKLIDEQVEKLVN-LAEKFDII 114 (132)
T ss_dssp CSSCSSBEEEEEEEEECSCHHHHHHHHHHHHH-HHHHHTCE
T ss_pred CCCCceeEEEEEEEeccCCHHHHHHHHHHHHH-HHHHhCcE
Confidence 23333479999988877776666666666655 78877754
No 84
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=54.80 E-value=1.1e+02 Score=32.21 Aligned_cols=135 Identities=14% Similarity=0.047 Sum_probs=69.6
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeec
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld 291 (776)
.+..+..+++.|.++|+++.+|.... .-+..+++.+. -.+.|+.... .+...++.. .++++.
T Consensus 204 ~~~~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~~~~g~-----~~i~H~~~~~-~~~i~~~~~-~g~~v~ 265 (408)
T 3be7_A 204 TLEEMKAIVDEAHNHGMKVAAHAHGL-----------IGIKAAIKAGV-----DSVEHASFID-DETIDMAIK-NNTVLS 265 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSH-----------HHHHHHHHHTC-----SEEEECTTCC-HHHHHHHHH-TTCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCC-----CEEEECCCCC-HHHHHHHHH-CCCEEe
Confidence 34456778889999999999998521 12444445321 2467875433 333333333 245443
Q ss_pred ccccCC----------CccH----H--HH----HHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhh
Q 004052 292 FGLAIP----------KLSV----Q--GM----ISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDT 351 (776)
Q Consensus 292 ~s~~~~----------~~~~----~--g~----~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~ 351 (776)
+..... ...+ . +. ...++.+++.+. ++++|||+.+.|.... ...++. +
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~~~~gTD~~~~p~~~~--~~~~~~--------~ 333 (408)
T 3be7_A 266 MDIFVSDYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGA--IITFGTDAGIFDHGDN--AKQFAY--------M 333 (408)
T ss_dssp CCCSTHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--CEECCCCBTTBCTTCG--GGHHHH--------H
T ss_pred eeecHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEECCCCCCCCchH--HHHHHH--------H
Confidence 321100 0000 0 00 124555555442 6889999755443211 111211 1
Q ss_pred hccCCCChhhHHHHHHHHHHHhHHHHhCCC
Q 004052 352 CIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 352 v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (776)
++. .++..+ +-+.+-.|++++|+++
T Consensus 334 ~~~-gls~~~----al~~~T~n~A~~lgl~ 358 (408)
T 3be7_A 334 VEW-GMTPLE----AIQASTIKTATLFGIE 358 (408)
T ss_dssp HHT-TCCHHH----HHHTTTHHHHHHHTCS
T ss_pred HHc-CCCHHH----HHHHHHHHHHHHhCCC
Confidence 222 477543 4445567889999987
No 85
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=54.51 E-value=1.4e+02 Score=32.14 Aligned_cols=155 Identities=15% Similarity=0.078 Sum_probs=72.3
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCCCCC----cCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeee
Q 004052 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (776)
Q Consensus 214 ~~l~~l~e~a~e~glPvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVy 289 (776)
..+..+++.|.++|+++.+|......... ..-..+ +..+.+. ...+-+.++.|+.+--..+...++.. +++
T Consensus 227 ~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~l~~~~~~~H~~~~~~~~~~~l~~~--g~~ 301 (468)
T 3lnp_A 227 EPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRP--TQRLADI-GFLNERVSCVHMTQVDDGDIKILQKT--GAS 301 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCSCCHHHHHHHHHH--CCE
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHhc--CCE
Confidence 35667788999999999999964210000 000111 1112221 23456778899865444444555543 333
Q ss_pred ecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhh--ccCCCChhhHHHHHH
Q 004052 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAK 367 (776)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~ea~~~~~ 367 (776)
+......+.....++ ..++.+++.+ -++.+|||+...... ......++.. ..+.... ....++.. +..+
T Consensus 302 v~~~p~s~~~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~---~al~ 372 (468)
T 3lnp_A 302 IIHCPESNLKLASGF-CPIAKLSAAN--IPLAIGTDGAASNND-LDMFSETKTA--ALLAKGVSQDASAIPAI---EALT 372 (468)
T ss_dssp EEECHHHHHHTTCCC-CCHHHHHHTT--CCEEECCCCTTSSCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHH---HHHH
T ss_pred EEEChhhhhhcCCCC-CCHHHHHHCC--CeEEEECCCCcCCCC-CCHHHHHHHH--HHHhhhccCCCCcCCHH---HHHH
Confidence 322111000000010 1245555543 278899996543110 0111112111 1122211 13457753 3444
Q ss_pred HHHHHhHHHHhCCCCC
Q 004052 368 DIFALNAAQFYKINLG 383 (776)
Q Consensus 368 ~Il~~NA~rly~l~~~ 383 (776)
+ +-.|++++++++..
T Consensus 373 ~-~T~~~A~~lg~~~~ 387 (468)
T 3lnp_A 373 M-ATLGGARALGIDDI 387 (468)
T ss_dssp H-HTHHHHHHTTCTTT
T ss_pred H-HHHHHHHHhCCCCC
Confidence 4 44688889998754
No 86
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=54.05 E-value=12 Score=41.96 Aligned_cols=143 Identities=13% Similarity=0.038 Sum_probs=87.1
Q ss_pred ceeEEeeeeEEEEEeecccCCCCCccccCCCCcccCCccccchHHHHHHHHHHHhCCCCeeeeccCCCCCceEEecccch
Q 004052 523 LVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTV 602 (776)
Q Consensus 523 ~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~ 602 (776)
..+.+|+|-|+..+++ +|.-...|+.. ... +. ..-..+.+|..-.|.|+..+++.
T Consensus 31 ~~~~~GIE~E~lRVd~---~G~La~tphP~--~LG-s~-------------------lthp~IttDfsEsqlE~iTp~~~ 85 (525)
T 3nzt_A 31 INNLRGIERETLRVTD---CGNLATSNHPD--GLG-HK-------------------LTNNSITVDFSENLLELITKPHD 85 (525)
T ss_dssp CCCEEEEEEEEEEEET---TSCBCCSCSCG--GGC-CT-------------------TTCSSEEESSBTTEEEEECCCBS
T ss_pred CCCCcceEeeeeEECC---CCCcCCCCChH--hhc-cC-------------------ccCCCCCchhhhhHhhhcCCCCC
Confidence 4689999999999986 33211122110 000 00 01135667888899999999975
Q ss_pred -HHHhhhHHHHHHHHHHHHH-HHcCCeeEecccccCC--C----C--------------------------Cccceeeec
Q 004052 603 -AAKAADNLIFTREVLRAVA-RKHGLLATFVPKFALD--D----I--------------------------GSGSHVHLS 648 (776)
Q Consensus 603 -~l~aaD~~~~~r~~ik~vA-~~~G~~aTFmpKP~~~--~----~--------------------------GsG~HvH~S 648 (776)
.-++-+.+-..+.++.+.+ ....+-..=||=|..+ . - =||.|+|+|
T Consensus 86 s~~ea~~~L~~l~~~v~~~l~~~E~LWp~SmPl~~~~~~ipiA~yg~sn~g~~k~~YR~gL~~rYG~~~q~IsGiH~Nfs 165 (525)
T 3nzt_A 86 SIDKAIGELYQLSAFTLDNMHSDEIILNTSMPLSANDNDIQEADFGSSNSGRMKRVYRKGLSARYGKIMQIISGIHYNFS 165 (525)
T ss_dssp SHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCCSCCGGGCCBCCCCSSHHHHHHHHHHHHHHHHHCSGGGGCCBEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCeEEeecCCCCCCcCCCceeeccccccCcchHHHHHHHHHHhchhheeeeeEEEEec
Confidence 6677888888888888876 5566666557622111 0 1 168999999
Q ss_pred cccCCcc-ccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHhhhCCCC
Q 004052 649 LWQNGEN-VFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (776)
Q Consensus 649 l~~~g~n-~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt~ 694 (776)
+-++=-. ++...+. .-|...-..+-+.+.+..-|+.++..++
T Consensus 166 l~~~~~~~l~~~~~~----~~s~~Y~~Lirnf~Ry~Wll~YLfGASP 208 (525)
T 3nzt_A 166 FDKDLISNIATNKQV----SISDIYFDVLNNYFEFMWLLPYLFGASP 208 (525)
T ss_dssp CCHHHHHHHHHHHTC----CHHHHHHHHHHHHHHHTTHHHHHHCCBC
T ss_pred CCHHHHHHHHHhccc----chhHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 9532101 1100001 1345555667788888888888877665
No 87
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=53.29 E-value=1.6e+02 Score=31.31 Aligned_cols=25 Identities=12% Similarity=-0.149 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecC
Q 004052 211 LIDYIFISSLEVAQFLDLPLQIHTG 235 (776)
Q Consensus 211 l~d~~l~~l~e~a~e~glPvq~H~G 235 (776)
+.+..+..+.+.|.++|+++.+|..
T Consensus 212 ~~~e~l~~~~~~A~~~g~~v~~H~~ 236 (426)
T 2r8c_A 212 YSEDEIRAIVAEAQGRGTYVLAHAY 236 (426)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeC
Confidence 4455677889999999999999986
No 88
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=52.96 E-value=1.9e+02 Score=30.87 Aligned_cols=157 Identities=16% Similarity=0.112 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCC----cCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCee
Q 004052 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 213 d~~l~~l~e~a~e~glPvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
+..+..+++.|.++|+++.+|......... ..-..+ ++.+.+. ...+-+.++.|+.+.-..+...++.. ++
T Consensus 201 ~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~l~~~--g~ 275 (451)
T 4dyk_A 201 DDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERP--LARLHRL-GLLGPRFQAVHMTQVDNDDLAMLVET--NS 275 (451)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCCCCHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHC-CCCCCCeEEEECCCCCHHHHHHHHHc--CC
Confidence 345677889999999999999864210000 000111 1212221 23456778899865444455555543 23
Q ss_pred eecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhh--ccCCCChhhHHHHH
Q 004052 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVA 366 (776)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~ea~~~~ 366 (776)
.+...-..+.....+ ...++.+++.+. ++.+|||+...+. .......++... .+.... ....++.. +..
T Consensus 276 ~v~~~p~s~~~~~~~-~~~~~~~~~~Gv--~v~lgtD~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~al 346 (451)
T 4dyk_A 276 SVIHCPESNLKLASG-FCPVEKLWQAGV--NVAIGTDGAASNN-DLDLLGETRTAA--LLAKAVYGQATALDAH---RAL 346 (451)
T ss_dssp EEEECHHHHHHTTCC-CCCHHHHHHHTC--CEEECCCCGGGSS-CCCHHHHHHHHH--HHHHHHHTCTTSSCHH---HHH
T ss_pred EEEEChhhhhhccCC-cccHHHHHhCCC--eEEEECCCCccCC-CCCHHHHHHHHH--HHhhhhcCCCCCCCHH---HHH
Confidence 332211000000001 012455555543 7889999543211 001111122111 111111 12457753 344
Q ss_pred HHHHHHhHHHHhCCCCCc
Q 004052 367 KDIFALNAAQFYKINLGV 384 (776)
Q Consensus 367 ~~Il~~NA~rly~l~~~~ 384 (776)
++ +-.|+++.++++...
T Consensus 347 ~~-~T~~~A~~lg~~~~~ 363 (451)
T 4dyk_A 347 RM-ATLNGARALGLERLI 363 (451)
T ss_dssp HH-HTHHHHHHHTCTTTS
T ss_pred HH-HHHHHHHHcCCCCCC
Confidence 44 446888899986543
No 89
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=50.60 E-value=67 Score=36.33 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=23.7
Q ss_pred HHHHhhhhhccCCC-ChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 344 VFSVLRDTCIDEDL-SVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 344 l~~~l~~~v~~g~l-~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
+..++...|+.+.+ +..+ +-..+-.|++++|++..
T Consensus 400 l~~ll~~~v~~~~l~~~~~----~~~~~t~~~A~~lgl~~ 435 (559)
T 2fty_A 400 MPLLYDYGYLRGNLTSMMK----LVEIQCTNPAKVYGMYP 435 (559)
T ss_dssp HHHHHHHTTTTTSSSCHHH----HHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCCCCHHH----HHHHHhHHHHHHhCCCC
Confidence 33445667777888 8643 44556688899999853
No 90
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=49.40 E-value=13 Score=30.75 Aligned_cols=66 Identities=8% Similarity=0.179 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhCCCCeeeeccCCCCCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCeeEeccc
Q 004052 566 PVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPK 633 (776)
Q Consensus 566 ~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpK 633 (776)
-++.++...+.+.|++|..++.....|.|.+.+.-.- ...+++-..+.-+++++.++|+.+++.|.
T Consensus 17 Gila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~--~~~~~l~~l~~~L~~~~~~~~~~~~~~~~ 82 (91)
T 1zpv_A 17 GIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSS--DEKQDFTYLRNEFEAFGQTLNVKINIQSA 82 (91)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE--SSCCCHHHHHHHHHHHHHHHTEEEEEEEG
T ss_pred CHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEe--CCCCCHHHHHHHHHHHHHHcCCEEEEeeH
Confidence 3788899999999999998887766688777765421 11335566777789999999999888654
No 91
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=40.76 E-value=54 Score=35.69 Aligned_cols=154 Identities=12% Similarity=0.040 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCC----CcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCee
Q 004052 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (776)
Q Consensus 213 d~~l~~l~e~a~e~glPvq~H~G~gd~~~----~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (776)
+..+..+++.|.++|+++.+|........ +..-..| ++.+.+. ...+.+.++.|+.+....+...++.. ++
T Consensus 239 ~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~--g~ 313 (479)
T 3h4u_A 239 RDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTP--AEYAEDL-GWVGHDVWHAHCVQLDDAGIGLFART--GT 313 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CH--HHHHHHT-TCCSTTEEEEECTTCCHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCeEEEEecCCCHHHHHHHHHc--CC
Confidence 34567778999999999999996431000 0001112 2222222 33456788899865544555555544 23
Q ss_pred eecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCc-cccchhhHHHHHHHHHHhhhhh-ccCCCChhhHHHHH
Q 004052 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ETYFLGAKRAREVVFSVLRDTC-IDEDLSVGEAIEVA 366 (776)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-~~~~~~~~~~r~~l~~~l~~~v-~~g~l~~~ea~~~~ 366 (776)
++...-..+.....+ ...++.+++.+ -++.+|||+.... ... ....++... .+.... ....++.. +..
T Consensus 314 ~v~~~p~s~~~l~~~-~~~~~~~~~~G--v~v~lgtD~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~~~---~al 383 (479)
T 3h4u_A 314 GVAHCPCSNMRLASG-IAPVKKMRLAG--VPVGLGVDGSASNDGAQ--MVAEVRQAL--LLQRVGFGPDAMTAR---EAL 383 (479)
T ss_dssp EEEECHHHHHHTTCC-CCCHHHHHHTT--CCEEECCCCTTSSCCCC--HHHHHHHHH--HHHHHHHCTTSCCHH---HHH
T ss_pred eEEEChhHhhhcCCC-CCCHHHHHHCC--CeEEEeCCCCccCCCcC--HHHHHHHHH--HHhcccCCCCCCCHH---HHH
Confidence 332211100000001 01245555543 3788999965432 111 111122211 111111 12237753 344
Q ss_pred HHHHHHhHHHHhCCCC
Q 004052 367 KDIFALNAAQFYKINL 382 (776)
Q Consensus 367 ~~Il~~NA~rly~l~~ 382 (776)
++ .-.|++++++++.
T Consensus 384 ~~-~T~~~A~~lg~~~ 398 (479)
T 3h4u_A 384 EI-ATLGGAKVLNRDD 398 (479)
T ss_dssp HH-TTHHHHHHHTCSS
T ss_pred HH-HHHHHHHHhCCCC
Confidence 44 4578888889864
No 92
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=37.85 E-value=1.7e+02 Score=31.64 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCC
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGF 236 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~ 236 (776)
....+..+++.+.++|+|+.+|...
T Consensus 204 ~~e~l~~~~~~A~~~g~~v~~H~~~ 228 (467)
T 1xrt_A 204 DSSVMRKALELASQLGVPIMDHCED 228 (467)
T ss_dssp CHHHHHHHHHHHHHHTCEEEECCCG
T ss_pred CHHHHHHHHHHHHhcCCEEEEECCC
Confidence 4456777888999999999999854
No 93
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=37.05 E-value=1.5e+02 Score=31.22 Aligned_cols=135 Identities=17% Similarity=0.139 Sum_probs=66.2
Q ss_pred HHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeecccccCCCc
Q 004052 220 LEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKL 299 (776)
Q Consensus 220 ~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~ 299 (776)
+..+.+.++|+.+|+...+ .....-.+++ ++ ++++.+.|+..-+. .+..++..--.|-+.....+...
T Consensus 213 l~~~~~~~~~v~iHa~~~~--------~i~~~~~~~~--~~-g~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~ 280 (396)
T 3ooq_A 213 GEMVLRKKIPARMHAHRAD--------DILTAIRIAE--EF-GFNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTK 280 (396)
T ss_dssp HHHHHTTSSCEEEEECSHH--------HHHHHHHHHH--HH-TCCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCS
T ss_pred HHHHHcCCCcEEEEECchh--------HHHHHHHHHH--Hc-CCCEEEecCchHHH-HHHHHHHCCCCEEECcccccccc
Confidence 3444589999999996321 1112223333 12 35678899864332 33444443222222222211110
Q ss_pred c---HHHHHHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHH
Q 004052 300 S---VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (776)
Q Consensus 300 ~---~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (776)
. ..+ ...++.+++.+ -++.+|||++..|... +.... ++ .+ +..++.. .+-+..-.|+++
T Consensus 281 ~~~~~~~-~~~~~~l~~~G--v~v~lgtD~~~~~~~~------l~~~~-~~---~~-~~gl~~~----~al~~~T~n~A~ 342 (396)
T 3ooq_A 281 LELKDLT-METIAKLLKDG--VLIALMCDHPVIPLEF------ATVQA-AT---AM-RYGAKEE----DLLKILTVNPAK 342 (396)
T ss_dssp GGGTTCC-TTHHHHHHHTT--CCEEECCTTTTSCGGG------HHHHH-HH---GG-GGTCCHH----HHHHTTTHHHHH
T ss_pred hhHHhhh-hHHHHHHHHCC--CEEEEEcCCCccCccH------HHHHH-HH---HH-HcCCCHH----HHHHHHHHHHHH
Confidence 0 001 12455666543 4788999975554211 11111 11 12 2246653 344556689999
Q ss_pred HhCCCCCc
Q 004052 377 FYKINLGV 384 (776)
Q Consensus 377 ly~l~~~~ 384 (776)
+++++...
T Consensus 343 ~lg~~~~~ 350 (396)
T 3ooq_A 343 ILGLEDRI 350 (396)
T ss_dssp HTTCTTTS
T ss_pred HhCCCCCe
Confidence 99997543
No 94
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=36.74 E-value=4.3e+02 Score=28.45 Aligned_cols=25 Identities=8% Similarity=-0.047 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHhhC-CCcEEEecCC
Q 004052 212 IDYIFISSLEVAQFL-DLPLQIHTGF 236 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~-glPvq~H~G~ 236 (776)
.+..+..+++.+.++ |+++.+|+..
T Consensus 212 ~~e~l~~~~~~a~~~~g~~v~~H~~e 237 (475)
T 2ood_A 212 SPELLKACQRLKHEHPDCWVNTHISE 237 (475)
T ss_dssp CHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CHHHHHHHHHHHHhCCCCcEEEeeCC
Confidence 345667788899999 9999999963
No 95
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=35.36 E-value=81 Score=34.73 Aligned_cols=56 Identities=11% Similarity=-0.006 Sum_probs=31.3
Q ss_pred cEEEecCCCCCccccchhhHHHHHHHHHHhhhhhc-cCCCChhhHHHHHHHHHHHhHHHHhCCC
Q 004052 319 KVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 319 kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~-~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (776)
++++|||+..+.. ....+ .-..+..++..+++ .+.++.. +++++ +-.|.+++|+++
T Consensus 373 ~~~iGTD~~~~~~--~~~~~-~~~~~~~~l~~~v~~~~~l~~~---~~l~~-~T~~~A~~lgl~ 429 (496)
T 1rk6_A 373 PTMIGSDGLPHDE--RPHPR-LWGTFPRVLGHYSRDLGLFPLE---TAVWK-MTGLTAAKFGLA 429 (496)
T ss_dssp TEEECCCCCTTCS--SCCTH-HHHHHHHHHCCCCCCTCSSCHH---HHHHT-TTHHHHHHHTCT
T ss_pred CEEEecCCCCCCC--CCCch-hhccHHHHHHHHHhhcCCCCHH---HHHHH-HHHHHHHHhCCC
Confidence 7899999743211 01111 11134455666675 5678864 34444 456777888985
No 96
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=35.06 E-value=4e+02 Score=28.19 Aligned_cols=24 Identities=21% Similarity=0.169 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecC
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTG 235 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G 235 (776)
.+..+..+++.+.++++++.+|..
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~e 184 (458)
T 1gkp_A 161 DDGEMYQTLRLAKELGVIVTAHCE 184 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEES
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcC
Confidence 344566677888888999999984
No 97
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=32.37 E-value=47 Score=35.78 Aligned_cols=84 Identities=13% Similarity=0.071 Sum_probs=48.6
Q ss_pred cHHHHHHHHHHHHHhhccc-cccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCCC----CCcCCchhh--hhHHHHHH
Q 004052 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGK----PVRITNKSL--IDYIFISS 219 (776)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~~----~~~~~~~~l--~d~~l~~l 219 (776)
+++++++++.+.++..... -+..+-|.|.... .+++++.+.++.+++... +..+.+.+. .-..+.++
T Consensus 129 ~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~------~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~ 202 (380)
T 4gxw_A 129 PYADAQAAIVTGMRDAARDFGIGARLIPSIDRE------QDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKA 202 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETT------SCHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCC------CCHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHH
Confidence 4777777777766654321 1445556664222 256777776666555311 111111110 01146788
Q ss_pred HHHHhhCCCcEEEecCC
Q 004052 220 LEVAQFLDLPLQIHTGF 236 (776)
Q Consensus 220 ~e~a~e~glPvq~H~G~ 236 (776)
++.|.+.|+++.+|.|-
T Consensus 203 f~~ar~~Gl~~t~HAGE 219 (380)
T 4gxw_A 203 YRDARAAGFRTTAHAGE 219 (380)
T ss_dssp HHHHHHTTCEEEEEESC
T ss_pred HHHHHHcCCCeeeeccc
Confidence 99999999999999995
No 98
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=31.59 E-value=43 Score=35.51 Aligned_cols=158 Identities=18% Similarity=0.120 Sum_probs=81.3
Q ss_pred cHHHHHHHHHHHHHhhccc-cccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCCC---CCcCCchh--hhhHHHHHHH
Q 004052 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGK---PVRITNKS--LIDYIFISSL 220 (776)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vGfksv~~y~~Gl~~~~~~~~~ea~~~~~r~l~~~~---~~~~~~~~--l~d~~l~~l~ 220 (776)
+++++++++.+.++.+... -++.+-|.|.... .+++++.+.++.+++-.. +..+.+.+ ..-..+.+++
T Consensus 113 ~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~------~~~~~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~ 186 (343)
T 3rys_A 113 ALETCVNGVANALATSEEDFGVSTLLIAAFLRD------MSEDSALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLY 186 (343)
T ss_dssp CHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETT------SCHHHHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCC------CCHHHHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHH
Confidence 4667777776666553221 1446666665322 246667766666655211 11111111 0112356889
Q ss_pred HHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCch--HHHHHHHHHhC--------Ceeee
Q 004052 221 EVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF--SKEASYLAYVY--------PQVYL 290 (776)
Q Consensus 221 e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~--~~e~~~la~~~--------pNVyl 290 (776)
+.|.++|+++.+|.|-.. .|..+.+.+.. --++ + +.|+-.-. ......++..- .|+++
T Consensus 187 ~~A~~~gl~~~~HagE~~--------~~~~i~~al~~-lg~~-r--IgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l 254 (343)
T 3rys_A 187 QRAAEAGLRRIAHAGEEG--------PASYITEALDV-LHVE-R--IDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRL 254 (343)
T ss_dssp HHHHHTTCEEEEEESSSS--------CHHHHHHHHHT-SCCS-E--EEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHT
T ss_pred HHHHHCCCeEEEeeCCCC--------CHHHHHHHHhc-CCcc-e--eeeeeeecCChHHHHHHHhcCCCeeEchhHHHHh
Confidence 999999999999998532 35555554441 1122 2 57873211 12334444332 25554
Q ss_pred cccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcc
Q 004052 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPE 331 (776)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~ 331 (776)
.. ++.. + ...++.+++.+ =++..+||.+.+-.
T Consensus 255 ~~---~~~~---~-~hPi~~ll~~G--v~V~l~TDdp~~~~ 286 (343)
T 3rys_A 255 RA---VDKL---A-DHPLPEMLAIG--LNVCVNSDDPAYFG 286 (343)
T ss_dssp TS---SSCG---G-GCSHHHHHHTT--CCEEECCBSTTTTT
T ss_pred CC---CCCc---c-cchHHHHHHCC--CeEEEeCCCccccC
Confidence 33 1111 0 11355666644 47889999766543
No 99
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=31.36 E-value=75 Score=28.19 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=46.7
Q ss_pred CccccchHHHHHHHHHHHhCCCCeeeecc-------C----CCCCceEEecccchH--HH------hhhHHHHHHHHHHH
Q 004052 559 AAYDAVSPVFQEVLADLHSLNISVEQLHA-------E----AGKGQFEIALGHTVA--AK------AADNLIFTREVLRA 619 (776)
Q Consensus 559 ~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~-------E----~~pGQ~Ei~l~~~~~--l~------aaD~~~~~r~~ik~ 619 (776)
++...-.+++.+|.++|.+.||..++-.. + .+.-|||+.+--.+. +- ..=..+.||.++.+
T Consensus 34 TS~~~P~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~gV~~kRi~Gd~~~yk~lc~~ 113 (120)
T 3ose_A 34 TSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASK 113 (120)
T ss_dssp EECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEEEEEEEEEESCHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCceeEEEEecCCCHHHHHHHHHH
Confidence 34456789999999999999998887431 1 123578887655432 11 22256789999999
Q ss_pred HHHHcCC
Q 004052 620 VARKHGL 626 (776)
Q Consensus 620 vA~~~G~ 626 (776)
|..+..|
T Consensus 114 il~~L~L 120 (120)
T 3ose_A 114 IANELKL 120 (120)
T ss_dssp HHHHCCC
T ss_pred HHHHhcC
Confidence 9887653
No 100
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=30.43 E-value=4.7e+02 Score=27.63 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=21.5
Q ss_pred HHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhCCCC
Q 004052 345 FSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (776)
Q Consensus 345 ~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (776)
..++..+++.+.++..+ .+ +.+-.|++++++++.
T Consensus 343 ~~~~~~~~~~~~l~~~~---al-~~~T~~~A~~lgl~~ 376 (458)
T 1gkr_A 343 PMMLTNGVNKGRLSLER---LV-EVMCEKPAKLFGIYP 376 (458)
T ss_dssp HHHHHHTGGGTSSCHHH---HH-HHHTHHHHHHHTCTT
T ss_pred HHHHHHHHHhCCCCHHH---HH-HHHhhhHHHHhCCCC
Confidence 33455566667788643 34 445577888899863
No 101
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A*
Probab=29.99 E-value=53 Score=37.73 Aligned_cols=97 Identities=14% Similarity=0.039 Sum_probs=54.7
Q ss_pred HHHHHHHHhcCceeEEeeeeEEEEEeecccCCCCCccccCCCCcccCCccccchHHHHHHHH-HHHhCCCCeeeeccCCC
Q 004052 512 KVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLA-DLHSLNISVEQLHAEAG 590 (776)
Q Consensus 512 ~~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~-~l~~~Gi~ve~~h~E~~ 590 (776)
.+.++++++.|-.++.|-|+|++|++-...+ ....+. -...++++++.+ .+....-..-.+|+|+|
T Consensus 32 ~i~~~~k~r~~d~l~WGDEIEy~LV~~d~~~--k~arls-----------l~~~eIL~~L~~~~~~~~~~~~p~~~PEyG 98 (692)
T 3ig5_A 32 YIFQAAGKRDNDPLFWGDELEYMVVDFDDKE--RNSMLD-----------VCHDKILTELNMEDSSLCEANDVSFHPEYG 98 (692)
T ss_dssp HHHHHHTTCCCCCCEEEEEEEEEEEEEETTT--TEEEEC-----------CSCTTHHHHTTTTTHHHHHHTTEEEECCSB
T ss_pred HHHHHhcccCCCcccccceeEEEEEEecCCC--ceeeec-----------ccHHHHHHHHhhhhhhcccCCCCcccchhh
Confidence 3555566567889999999999999863111 111111 111223332221 00001114469999999
Q ss_pred CCceEEecccchHHH------hhhHHHHHHHHHHHHHHH
Q 004052 591 KGQFEIALGHTVAAK------AADNLIFTREVLRAVARK 623 (776)
Q Consensus 591 pGQ~Ei~l~~~~~l~------aaD~~~~~r~~ik~vA~~ 623 (776)
.=..|. .|..|.. -=.++-.-|..++..+..
T Consensus 99 ryMlE~--TP~~Py~g~~~~~VE~nMr~RR~~a~~~l~~ 135 (692)
T 3ig5_A 99 RYMLEA--TPASPYLNYVGSYVEVNMQKRRAIAEYKLSE 135 (692)
T ss_dssp TTEEEE--EESSCEESCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ceeecc--CCCCCCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 888888 3332221 124566677778888877
No 102
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=29.59 E-value=3.9e+02 Score=28.29 Aligned_cols=69 Identities=20% Similarity=0.128 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCc----CCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHh
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDL----RLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYV 284 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~----~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~ 284 (776)
.+..+..+++.|.++|+++.+|..-.... .. .-..| ++.+.+. ..-+-+.++.|+.+.-..+...++..
T Consensus 217 ~~~~l~~~~~~a~~~g~~v~~H~~e~~~~-~~~~~~~~~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~ 289 (456)
T 3ls9_A 217 KPELFEAFAQMAADYDVRLHTHFYEPLDA-GMSDHLYGMTP--WRFLEKH-GWASDRVWLAHAVVPPREEIPEFADA 289 (456)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEECCTTHH-HHHHHHHSSCH--HHHHHHT-TCSSTTEEEEECCSCCGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCchH-HHHHHHhCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHc
Confidence 34467778899999999999999643100 00 00012 1222221 23345677889864433444455543
No 103
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=27.75 E-value=56 Score=34.71 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=40.7
Q ss_pred HHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCC--CCchHHH------HHHHHHhCCeee
Q 004052 218 SSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHA--SYPFSKE------ASYLAYVYPQVY 289 (776)
Q Consensus 218 ~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~--g~p~~~e------~~~la~~~pNVy 289 (776)
|+++.+++.|+||.+=+|... ...-..--+.+.. .- -+|+++|| +||-.++ ...|...||++=
T Consensus 126 pLL~~va~~gKPviLstGmst------l~Ei~~Ave~i~~--~g-~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lp 196 (350)
T 3g8r_A 126 PLLERIARSDKPVVASTAGAR------REDIDKVVSFMLH--RG-KDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVR 196 (350)
T ss_dssp HHHHHHHTSCSCEEEECTTCC------HHHHHHHHHHHHT--TT-CCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSE
T ss_pred HHHHHHHhhCCcEEEECCCCC------HHHHHHHHHHHHH--cC-CCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCC
Confidence 456777899999999999641 1111111223332 21 26999999 5774332 345667788776
Q ss_pred ecccc
Q 004052 290 LDFGL 294 (776)
Q Consensus 290 ld~s~ 294 (776)
++.|.
T Consensus 197 VG~Sd 201 (350)
T 3g8r_A 197 IGYST 201 (350)
T ss_dssp EEEEE
T ss_pred EEcCC
Confidence 66553
No 104
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=26.36 E-value=5.5e+02 Score=26.45 Aligned_cols=23 Identities=13% Similarity=0.056 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhhCCCcEEEecCC
Q 004052 214 YIFISSLEVAQFLDLPLQIHTGF 236 (776)
Q Consensus 214 ~~l~~l~e~a~e~glPvq~H~G~ 236 (776)
..+..+++.+.++|+|+.+|...
T Consensus 198 ~~l~~~~~~A~~~g~~v~~H~~~ 220 (403)
T 2qt3_A 198 GSLDLCFKLAKEYDVDIDYHIHD 220 (403)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEeCC
Confidence 45778889999999999999864
No 105
>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1
Probab=25.71 E-value=1.1e+02 Score=27.39 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=48.0
Q ss_pred CCccccchHHHHHHHHHHHhCCCCeee--------eccCC---CCCceEEecccchHHH--------hhhHHHHHHHHHH
Q 004052 558 TAAYDAVSPVFQEVLADLHSLNISVEQ--------LHAEA---GKGQFEIALGHTVAAK--------AADNLIFTREVLR 618 (776)
Q Consensus 558 ~~~~~~~~~~~~~i~~~l~~~Gi~ve~--------~h~E~---~pGQ~Ei~l~~~~~l~--------aaD~~~~~r~~ik 618 (776)
+++...-.+++.+|.++|.+.||+.++ .|... ..=||||.+--.+.+. ..-+.+.||.++.
T Consensus 33 tTSsk~P~eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEiEVcKvp~l~l~GI~fKRisGd~w~YK~lc~ 112 (126)
T 1v5s_A 33 QGSSGSSGDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIAS 112 (126)
T ss_dssp CCCCSSHHHHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEEECCCCTTTCSCCCEEEEEESCHHHHHHHHH
T ss_pred eecCCCHHHHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEEEEEEecCCCceeEEEeeccCchhHHHHHHH
Confidence 334445689999999999999998886 13211 1238999876443111 1125699999999
Q ss_pred HHHHHcCC
Q 004052 619 AVARKHGL 626 (776)
Q Consensus 619 ~vA~~~G~ 626 (776)
+|..+..+
T Consensus 113 ~IL~eLkL 120 (126)
T 1v5s_A 113 KIANELKL 120 (126)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHhc
Confidence 99998875
No 106
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=24.26 E-value=2.3e+02 Score=30.62 Aligned_cols=107 Identities=16% Similarity=0.061 Sum_probs=49.6
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcC---C-cChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCe
Q 004052 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR---L-SNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ 287 (776)
Q Consensus 212 ~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~---~-~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pN 287 (776)
.+..+..+++.+.++|+++.+|....+...... + ..+ +..+.+. ...+-+.++.|+.+-...++..++.. +
T Consensus 227 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~i~~l~~~--g 301 (492)
T 2paj_A 227 SPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSP--VAFCGEH-DWLGSDVWYAHLVKVDADEIALLAQT--G 301 (492)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECC-------------CCCH--HHHHHHT-TCCSTTEEEESCCSCCHHHHHHHHHH--T
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCH--HHHHHHC-CCCCCCcEEEEEecCCHHHHHHHHHc--C
Confidence 444667788999999999999997532111110 0 112 2222221 23334577889865433444444432 3
Q ss_pred eeecccccCCCccHHHHHHHHHHHHHHCCCCcEEEecCC
Q 004052 288 VYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDA 326 (776)
Q Consensus 288 Vyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~ 326 (776)
+++.+....+.....+ ...++.+++.+ -++.+|||+
T Consensus 302 v~v~~~p~~~~~l~~~-~~p~~~~~~~G--v~v~lgTD~ 337 (492)
T 2paj_A 302 TGVAHCPQSNGRLGSG-ICPVREMADAG--VPVSIGVDG 337 (492)
T ss_dssp CEEEECHHHHHCC------CCTTHHHHT--CCEEECCCH
T ss_pred CEEEECchhhcccCCC-CCCHHHHHHCC--CcEEEeCCC
Confidence 4443321000000001 11234455543 368899994
No 107
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=22.22 E-value=5.1e+02 Score=28.80 Aligned_cols=146 Identities=21% Similarity=0.148 Sum_probs=71.5
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCcCCcChhhhHHHHHhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeee
Q 004052 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (776)
Q Consensus 211 l~d~~l~~l~e~a~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyl 290 (776)
+....+..+.+.|.++|+++.+|.- |+. +.-..|+.+.+. . .+..+.|+.+.-..+...++.. +|++
T Consensus 326 ~~~e~l~~~v~~A~~~G~~v~~Ha~-gd~------ai~~~l~a~~~~---~-~r~~ieH~~~~~~e~i~~la~~--gv~~ 392 (534)
T 3icj_A 326 MNKDEIVEVIERAKPLGLDVAVHAI-GDK------AVDVALDAFEEA---E-FSGRIEHASLVRDDQLERIKEL--KVRI 392 (534)
T ss_dssp SCHHHHHHHHHHHTTTTCEEEEEEC-SHH------HHHHHHHHHHHH---T-CCCEEEECCBCCHHHHHHHHHH--TCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc-ChH------HHHHHHHHHHhc---c-CCCEEEECCCCCHHHHHHHHHc--CCeE
Confidence 3445678889999999999999985 321 111233333332 1 4567789865444444555542 2333
Q ss_pred cc--cccCCC--c-cHHHH-----HHHHHHHHHHCCCCcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChh
Q 004052 291 DF--GLAIPK--L-SVQGM-----ISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVG 360 (776)
Q Consensus 291 d~--s~~~~~--~-~~~g~-----~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ 360 (776)
.. .....+ . ..-|. ...++.+++. =++.+|||+...|.. .-..++..+.+ ..+..+..++..
T Consensus 393 ~~~P~~~~~~~~~~~~lg~~r~~~~~p~~~l~~~---v~valGSD~p~~~~~---p~~~~~~av~r--~~~~~~~~ls~~ 464 (534)
T 3icj_A 393 SAQPHFIVSDWWIVNRVGEERAKWAYRLKTLSSI---TKLGFSTDSPIEPAD---PWVSIDAAVNR--YVVDPGERVSRE 464 (534)
T ss_dssp EECTTHHHHCTTHHHHHHHHHGGGBTCHHHHHHH---SCEEECCTTTTSCCC---HHHHHHHHHHC--CSSCGGGCCCHH
T ss_pred EEccccccchhHHHHhhCHHHHhccHHHHHHHHh---CCEEeecCCCCCCCC---HHHHHHHHHhc--cccCcccCCCHH
Confidence 21 110000 0 00110 0135666665 478899996443321 11112222211 112222346643
Q ss_pred hHHHHHHHHHHHhHHHHhCCC
Q 004052 361 EAIEVAKDIFALNAAQFYKIN 381 (776)
Q Consensus 361 ea~~~~~~Il~~NA~rly~l~ 381 (776)
+..+... .|+++.++++
T Consensus 465 ---eaL~~~T-~~~A~~lg~e 481 (534)
T 3icj_A 465 ---EALHLYT-HGSAQVTLAE 481 (534)
T ss_dssp ---HHHHHTT-HHHHHHTTCT
T ss_pred ---HHHHHHH-HHHHHHhCCC
Confidence 4555555 5566677776
No 108
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=22.00 E-value=1.2e+02 Score=29.50 Aligned_cols=109 Identities=14% Similarity=0.138 Sum_probs=55.4
Q ss_pred hhHHHHHhcCCCCcEEEEeCCCCc-----hHHHHHHHHHhCCeeeecccccC----CCccHHHHHH---HHHHHHHHCCC
Q 004052 250 HLRAILEDKRFSKCRFVLLHASYP-----FSKEASYLAYVYPQVYLDFGLAI----PKLSVQGMIS---SIKELLELAPT 317 (776)
Q Consensus 250 ~L~~l~~~~~~P~l~ivl~H~g~p-----~~~e~~~la~~~pNVyld~s~~~----~~~~~~g~~~---~l~~~le~~~~ 317 (776)
.....++ . .+. |+.|++.+ +..+.+..|.. .||.+++.... +..++.+... .+.++....+
T Consensus 88 ~n~~a~~--~--~vD-II~Hp~~~~~~~~~~~~~a~~A~e-~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g- 160 (212)
T 1v77_A 88 VIRYSIE--K--GVD-AIISPWVNRKDPGIDHVLAKLMVK-KNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYK- 160 (212)
T ss_dssp HHHHHHH--T--TCS-EEECTTTTSSSCSCCHHHHHHHHH-HTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHh--C--CCC-EEecccccccCCCCCHHHHHHHHH-CCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcC-
Confidence 3444556 3 455 44688644 21344555544 37888886521 1111222222 2333444445
Q ss_pred CcEEEecCCCCCccccchhhHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHhHHHHhC
Q 004052 318 KKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (776)
Q Consensus 318 ~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (776)
-.|++|||++. |.. .+. +.++. +++.+ -.++. +.+...+..|+++++.
T Consensus 161 ~~ivisSDAh~-~~~--v~~--~~~~~-~l~~~----~G~~~----e~~~~~l~~~~~~i~~ 208 (212)
T 1v77_A 161 VRRFLTSSAQE-KWD--VRY--PRDLI-SLGVV----IGMEI----PQAKASISMYPEIILK 208 (212)
T ss_dssp CCEEEECCCSS-GGG--CCC--HHHHH-HHHHH----TTCCH----HHHHHTTTHHHHHHHC
T ss_pred CCEEEeCCCCC-hhh--cCC--HHHHH-HHHHH----cCCCH----HHHHHHHHHHHHHHHH
Confidence 38999999985 421 122 22222 22222 14563 5677778888888875
No 109
>2fao_A Probable ATP-dependent DNA ligase; polymerase, primase, NHEJ, hydrolase/transferase complex; 1.50A {Pseudomonas aeruginosa} PDB: 2faq_A* 2far_A*
Probab=21.21 E-value=1.2e+02 Score=31.52 Aligned_cols=125 Identities=18% Similarity=0.150 Sum_probs=76.4
Q ss_pred HHhCC-CCeeeeccCCC----CCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCeeEecccccCCCCCccceeeecc
Q 004052 575 LHSLN-ISVEQLHAEAG----KGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSL 649 (776)
Q Consensus 575 l~~~G-i~ve~~h~E~~----pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpKP~~~~~GsG~HvH~Sl 649 (776)
+.++| |++..+..-.+ |.+.-|.|.|.+++.-.+-.-.++. +|++..+.|+. +| ||-. .|.|+||-+-|
T Consensus 111 ~aq~~~lE~H~w~~~~~~~~~PD~lvfDLDP~~~~~f~~v~~aA~~-~r~~L~~lGL~-~f-~KTS---GgkGlHV~vPl 184 (309)
T 2fao_A 111 AVQMGSIEFHTWNASLANLERPDRFVLDLDPDPALPWKRMLEATQL-SLTLLDELGLR-AF-LKTS---GGKGMHLLVPL 184 (309)
T ss_dssp HHHTTEEEEEECSSCTTCTTSCSEEEEEEEECTTSCHHHHHHHHHH-HHHHHHHHTCC-CE-EEEC---SSSSEEEEEEC
T ss_pred HHHhCcEEeeCCcccCCCCCCCCEEEEECCCCcCCCHHHHHHHHHH-HHHHHHHcCCc-ee-eEcc---CCCeeEEEEEc
Confidence 45555 66665555443 8899999999987766665555555 89999999986 45 7743 56999999998
Q ss_pred ccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhHh-hhCCCCCcccCCCCCCcCCcccccccCCCCCccccc
Q 004052 650 WQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILA-FTAPVPNSYDRIQPNTWSGAYQCWGKENREAPLRTA 724 (776)
Q Consensus 650 ~~~g~n~f~~~d~~~~~~ls~~~~~fiaGil~h~~al~a-~~~Pt~nSY~Rl~~~~~ap~~~~WG~~NR~a~iRi~ 724 (776)
... . -.+..+.|.-.|-+++-.-.. .+ |.+.-|....|. .++.|-.++|...+--|
T Consensus 185 ~~~---~-----------~~~~vr~fa~~~A~~l~~~~Pd~~--t~~~~k~~R~gk---IfiDy~qN~~g~T~vap 241 (309)
T 2fao_A 185 ERR---H-----------GWDEVKDFAQAISQHLARLMPERF--SAVSGPRNRVGK---IFVDYLRNSRGASTVAA 241 (309)
T ss_dssp CSC---S-----------CHHHHHHHHHHHHHHHHHHCTTTE--ECSCSGGGSTTS---EEEECGGGSTTCCEECT
T ss_pred CCC---C-----------CHHHHHHHHHHHHHHHHHhCccee--ehhhhHhhCCCC---EEEeCccCCCCCeEEcc
Confidence 531 0 012356666666565544332 11 122233333321 56778777776655444
No 110
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=20.46 E-value=1.2e+02 Score=28.65 Aligned_cols=67 Identities=18% Similarity=0.207 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHhCCCCeeeeccCC--------CCCceEEecccchHHHhhhHHHHHHHHHHHHHHHcCCeeEeccc
Q 004052 565 SPVFQEVLADLHSLNISVEQLHAEA--------GKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPK 633 (776)
Q Consensus 565 ~~~~~~i~~~l~~~Gi~ve~~h~E~--------~pGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~G~~aTFmpK 633 (776)
-.++.++.+.|.+.|++|+.+..-. +.+.|-+.+.-.-+ ... ..-.+|..+..+|.+.|+...+.+-
T Consensus 104 ~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~-~~~~l~~~l~~~~~~~~~~~~~~~~ 178 (192)
T 1u8s_A 104 LGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGC-NLMQLQEEFDALCTALDVQGSLNFI 178 (192)
T ss_dssp TTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTS-CHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred ccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCC-CHHHHHHHHHHHHHHhCceEEEEEc
Confidence 3588899999999999998766542 45666666554322 122 3456788888999999999999874
Done!