Query 004054
Match_columns 776
No_of_seqs 355 out of 2260
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 12:46:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004054.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004054hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 9E-148 3E-152 1322.1 53.9 629 53-774 3-830 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 3E-147 9E-152 1300.9 54.7 636 52-774 12-706 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 3E-145 1E-149 1290.4 51.9 626 54-774 2-707 (721)
4 1x38_A Beta-D-glucan exohydrol 100.0 8E-116 3E-120 1019.8 41.1 528 44-635 4-601 (602)
5 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 1E-115 4E-120 1031.0 40.1 521 50-640 20-619 (822)
6 3bmx_A Uncharacterized lipopro 100.0 7E-104 2E-108 925.0 36.0 498 49-637 28-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 2.1E-74 7.1E-79 652.3 26.9 419 83-577 83-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 3.5E-59 1.2E-63 506.1 19.0 252 81-374 70-337 (351)
9 4g6c_A Beta-hexosaminidase 1; 100.0 3.2E-52 1.1E-56 450.5 10.6 251 79-367 59-322 (348)
10 4gvf_A Beta-hexosaminidase; TI 100.0 3.7E-52 1.3E-56 449.7 8.6 249 83-367 54-314 (349)
11 2oxn_A Beta-hexosaminidase; TI 100.0 6.5E-52 2.2E-56 447.3 9.6 247 82-367 53-308 (340)
12 3idu_A Uncharacterized protein 96.9 0.0026 9E-08 58.4 8.7 51 681-741 33-84 (127)
13 2l0d_A Cell surface protein; s 96.3 0.013 4.3E-07 52.7 8.6 62 681-765 19-82 (114)
14 2kut_A Uncharacterized protein 95.8 0.0076 2.6E-07 54.8 4.6 55 681-740 16-72 (122)
15 3isy_A Bsupi, intracellular pr 94.3 0.24 8.1E-06 44.7 9.8 69 681-765 18-99 (120)
16 2x3c_A Toxic extracellular end 90.7 0.47 1.6E-05 50.9 7.9 64 681-746 36-116 (343)
17 4ep8_B Urease subunit beta; al 87.2 1.4 4.7E-05 37.9 6.6 53 682-738 19-82 (101)
18 2ys4_A Hydrocephalus-inducing 83.8 1.6 5.4E-05 39.2 5.9 76 681-768 41-117 (122)
19 2e6j_A Hydin protein; PAPD, st 83.3 2.4 8.1E-05 37.1 6.8 64 681-751 26-89 (112)
20 4ubp_B Protein (urease (chain 83.2 2.7 9.3E-05 37.6 6.8 54 682-739 25-89 (126)
21 4ac7_B Urease subunit beta; hy 83.2 2.7 9.3E-05 37.6 6.8 54 682-739 25-89 (126)
22 3fsa_A Azurin; copper, cupredo 81.2 1.3 4.5E-05 40.1 4.2 56 684-740 28-100 (125)
23 1w8o_A Bacterial sialidase; 3D 80.6 2.3 7.7E-05 48.9 7.1 52 681-742 373-426 (601)
24 1cuo_A Protein (azurin ISO-2); 76.1 5.7 0.00019 36.1 6.9 66 684-749 28-112 (129)
25 1yew_A Particulate methane mon 75.4 6 0.00021 41.9 7.6 56 681-741 264-336 (382)
26 1nwp_A Azurin; electron transp 75.0 4.9 0.00017 36.5 6.1 64 684-750 28-113 (128)
27 2iaa_C Azurin; quinoprotein, t 73.7 5.6 0.00019 36.1 6.2 64 684-750 27-112 (128)
28 2ccw_A Azurin II, AZN-2; elect 73.5 5.4 0.00019 36.3 6.1 25 726-750 86-113 (129)
29 3ay2_A Lipid modified azurin p 68.0 3.6 0.00012 39.2 3.7 24 726-750 125-151 (167)
30 3qga_A UREA2, fusion of urease 66.3 9.5 0.00033 37.4 6.2 53 683-739 125-188 (225)
31 3kmh_A D-lyxose isomerase; cup 64.8 7.2 0.00025 39.0 5.2 47 689-741 131-186 (246)
32 1e9y_A Urease subunit alpha; h 64.1 9 0.00031 37.9 5.6 52 684-739 126-188 (238)
33 1xf1_A C5A peptidase, SCP; hyd 59.7 7 0.00024 47.5 5.0 60 681-741 499-564 (926)
34 3qbt_B Inositol polyphosphate 58.6 23 0.0008 32.4 7.3 56 682-741 44-100 (140)
35 3rfr_A PMOB; membrane, oxidore 57.3 14 0.00047 39.6 6.0 55 681-741 298-368 (419)
36 2aan_A Auracyanin A; cupredoxi 53.5 15 0.00052 33.3 5.1 16 725-740 99-114 (139)
37 2co7_B SAFB chaperone, putativ 46.7 52 0.0018 32.5 8.1 52 684-740 29-81 (221)
38 3hrz_B Cobra venom factor; ser 46.1 38 0.0013 34.2 7.2 62 681-746 96-158 (252)
39 2cal_A Rusticyanin; iron respi 45.9 38 0.0013 31.5 6.6 54 684-739 70-128 (154)
40 4djm_A DRAB; chaperone, PILI; 45.5 53 0.0018 33.0 8.0 49 684-740 39-91 (239)
41 1iby_A Nitrosocyanin; RED copp 43.8 61 0.0021 27.8 7.3 40 684-740 47-86 (112)
42 4hci_A Cupredoxin 1; structura 43.4 58 0.002 27.4 7.0 17 724-740 60-76 (100)
43 3o0l_A Uncharacterized protein 42.9 1.7E+02 0.0058 25.5 10.2 59 681-741 38-96 (112)
44 2qsv_A Uncharacterized protein 38.8 39 0.0013 33.2 5.8 52 681-741 134-185 (220)
45 3zqx_A Cellulose 1,4-beta-cell 37.5 29 0.001 32.1 4.3 34 720-754 81-115 (146)
46 4fxk_B Complement C4-A alpha c 36.1 37 0.0013 40.1 6.1 57 681-741 168-224 (767)
47 3q48_A Chaperone CUPB2; IG fol 35.4 1.1E+02 0.0039 30.8 8.7 54 684-740 45-102 (257)
48 4ay0_A Chaperone protein CAF1M 35.2 97 0.0033 30.5 8.0 52 684-741 29-84 (218)
49 1qhq_A Protein (auracyanin); e 33.9 69 0.0024 28.7 6.3 17 725-741 98-114 (140)
50 1exg_A EXO-1,4-beta-D-glycanas 32.9 52 0.0018 28.7 5.0 61 679-740 17-89 (110)
51 4hs4_A Chromate reductase; tri 31.9 64 0.0022 31.1 6.0 55 476-541 62-121 (199)
52 1l4i_A SFAE protein; periplasm 31.6 1.2E+02 0.004 29.6 7.8 48 684-738 17-68 (206)
53 3qis_A Inositol polyphosphate 31.6 1.1E+02 0.0038 32.5 8.4 57 681-742 46-104 (366)
54 1g0d_A Protein-glutamine gamma 31.2 97 0.0033 35.9 8.0 57 681-741 486-546 (695)
55 1klf_A FIMC chaperone, chapero 31.1 99 0.0034 30.1 7.2 53 684-739 17-69 (205)
56 2hr0_B Complement C3 alpha' ch 29.3 82 0.0028 38.0 7.6 59 681-741 95-154 (915)
57 2x0j_A Malate dehydrogenase; o 29.0 15 0.00052 38.2 0.8 57 484-545 66-124 (294)
58 4gy7_A Urease; JACK bean, hydr 27.8 62 0.0021 38.7 5.9 53 682-738 150-213 (840)
59 3vku_A L-LDH, L-lactate dehydr 27.5 30 0.001 36.5 2.9 58 483-545 72-131 (326)
60 3ldh_A Lactate dehydrogenase; 26.7 37 0.0013 35.8 3.4 56 485-545 87-144 (330)
61 3lcm_A SMU.1420, putative oxid 26.5 84 0.0029 30.0 5.7 55 476-541 62-131 (196)
62 4h7p_A Malate dehydrogenase; s 26.1 19 0.00064 38.4 0.9 56 483-544 96-155 (345)
63 1oju_A MDH, malate dehydrogena 25.7 19 0.00064 37.5 0.8 58 483-545 65-124 (294)
64 2qsv_A Uncharacterized protein 25.5 96 0.0033 30.3 6.1 50 682-742 20-70 (220)
65 1wgo_A VPS10 domain-containing 25.5 59 0.002 28.9 3.8 53 624-707 65-117 (123)
66 4dzg_A PLIG; lysozyme inhibito 25.5 51 0.0018 29.0 3.6 16 753-768 77-95 (114)
67 1vjj_A Protein-glutamine gluta 25.0 1.2E+02 0.0042 35.1 7.4 59 681-741 496-556 (692)
68 3vta_A Cucumisin; subtilisin-l 24.9 90 0.0031 35.8 6.5 52 681-741 537-591 (621)
69 2hpv_A FMN-dependent NADH-azor 24.8 80 0.0027 30.2 5.3 55 477-542 84-153 (208)
70 2q3z_A Transglutaminase 2; tra 24.7 1.1E+02 0.0037 35.5 7.0 59 681-741 487-548 (687)
71 3p0r_A Azoreductase; structura 24.4 85 0.0029 30.4 5.4 55 477-542 82-151 (211)
72 1ex0_A Coagulation factor XIII 24.3 1.1E+02 0.0038 35.6 6.9 59 681-741 531-591 (731)
73 5mdh_A Malate dehydrogenase; o 24.2 37 0.0013 35.9 2.8 58 483-545 75-135 (333)
74 3tl2_A Malate dehydrogenase; c 23.8 24 0.00084 37.0 1.3 58 483-545 74-133 (315)
75 1rli_A Trp repressor binding p 23.5 1.3E+02 0.0046 27.7 6.5 54 477-541 61-127 (184)
76 3vmn_A Dextranase; TIM barrel, 23.4 55 0.0019 37.5 4.1 58 681-745 22-82 (643)
77 4aj2_A L-lactate dehydrogenase 23.2 30 0.001 36.6 1.9 57 484-545 84-142 (331)
78 3hhp_A Malate dehydrogenase; M 23.2 28 0.00094 36.5 1.6 58 483-545 65-124 (312)
79 3pqe_A L-LDH, L-lactate dehydr 22.7 24 0.00081 37.3 0.9 58 483-545 69-128 (326)
80 3nep_X Malate dehydrogenase; h 21.9 24 0.0008 37.1 0.7 58 483-545 65-124 (314)
81 2xg5_A PAPD, chaperone protein 21.7 2.4E+02 0.0082 27.6 8.1 52 684-740 17-72 (218)
82 3gfu_C Chaperone protein FAEE; 21.0 3.3E+02 0.011 26.8 8.9 51 684-740 17-71 (224)
83 3u7i_A FMN-dependent NADH-azor 20.9 1.2E+02 0.0041 29.7 5.7 54 478-542 85-154 (223)
84 3e9t_A Na/Ca exchange protein; 20.8 2.7E+02 0.0091 24.1 7.4 54 685-740 21-75 (114)
85 7mdh_A Protein (malate dehydro 20.2 37 0.0013 36.5 1.8 58 482-545 103-164 (375)
86 3ha2_A NADPH-quinone reductase 20.1 1.6E+02 0.0056 27.7 6.3 56 476-542 40-105 (177)
87 3gvi_A Malate dehydrogenase; N 20.0 37 0.0013 35.7 1.8 58 483-545 71-130 (324)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=9e-148 Score=1322.09 Aligned_cols=629 Identities=29% Similarity=0.461 Sum_probs=549.6
Q ss_pred HHHHHHHHhcCCHHHHHhcccc----cCCCCCCCCCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCCH
Q 004054 53 SQRARDLVSRLTLDEKISQLVN----SAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDS 128 (776)
Q Consensus 53 ~~r~~~ll~~MTleEKv~ql~~----~~~~~~rlgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d~ 128 (776)
+.|+++||++||||||++||.+ ...+++|+|||.+ +++|++||++. .++.+. .++|.||+++++|||||+
T Consensus 3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~~----~~~~~~-~~~t~fP~~~~laat~d~ 76 (845)
T 3abz_A 3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIRG----TKFFDG-VPSGCFPNGTGLASTFDR 76 (845)
T ss_dssp CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCCC----SCSTTC-CCBCCCCCHHHHHHTCCH
T ss_pred HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCeee----eeccCC-CCcCcCcCHHHHHhcCCH
Confidence 4689999999999999999986 4678999999998 68999999862 222110 148999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccee-eccccccCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 004054 129 YLWYRIGQAIGLEARALYNAGQAIGMTF-WAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGK 207 (776)
Q Consensus 129 ~l~~~~g~~~g~E~ra~~~~g~~~Gi~~-~aP~vdi~r~p~~gr~~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~~~~~~ 207 (776)
+|++++|+++|+|+|++ |+|+ |+|++||.|||+|||++|+|||||+|+++|+.|+|+|||++|
T Consensus 77 ~l~~~~g~~~g~E~ra~-------Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~g--------- 140 (845)
T 3abz_A 77 DLLETAGKLMAKESIAK-------NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGEG--------- 140 (845)
T ss_dssp HHHHHHHHHHHHHHHHT-------TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHTT---------
T ss_pred HHHHHHHHHHHHHHHHc-------CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhCC---------
Confidence 99999999999999999 9999 999999999999999999999999999999999999999998
Q ss_pred ceeeEeeccccccCCCCCCCCcceeeccccCHHHHHhccCchHHHHHHcCCccEEEeeccccCCcccccCHHHHHHHHHh
Q 004054 208 LQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARR 287 (776)
Q Consensus 208 ~~v~a~~KHFpg~g~~~~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~iLR~ 287 (776)
|+||+|||||||++. .|...++++++++|+|+||+||+++|+++.+++||||||++||+|||+|+++|++|||+
T Consensus 141 --V~a~~KHFpg~g~e~----~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~ 214 (845)
T 3abz_A 141 --IAATVKHFVCNDLED----QRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRD 214 (845)
T ss_dssp --CBCEEEEETTCCCCT----TTTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCC
T ss_pred --eeEEeeccccCCccc----CCccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhh
Confidence 999999999999643 45566778999999999999999999744456999999999999999999999999999
Q ss_pred hcCCCeEEEcCchhHHhhhcCccccCCHHHHHHHHHHcCCCccCcc---hhH-HHHHHHHHcCC-CCHHHHHHHHHHHHH
Q 004054 288 QWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGS---FLQ-KHTKAAVKQKK-LPESEIDRALHNLFS 362 (776)
Q Consensus 288 e~gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~---~~~-~~l~~av~~g~-i~~~~id~av~Ril~ 362 (776)
||||+|+|||||+++. ++++|++||+||+|+. ... +.|.+||++|+ |++++||+||+|||+
T Consensus 215 e~GF~G~VvSD~~~~~--------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~ 280 (845)
T 3abz_A 215 EWKWDGMLMSDWFGTY--------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLK 280 (845)
T ss_dssp CTCCCSEEECCTTCCC--------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHH
T ss_pred ccCCCeEEEcccccHH--------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHH
Confidence 9999999999998652 2478999999999962 222 48999999999 999999999999999
Q ss_pred HHHHhc----ccCCCCCCCCCCcCCCcccCCHHHHHHHHHHHhhhhhhhccCCCCCCCCCCCCCeEEEEccCCccccccC
Q 004054 363 VRMRLG----LFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLL 438 (776)
Q Consensus 363 ~k~~~G----lf~~~p~~~~~~~~~~~~i~~~~~~~la~~~A~esiVLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~ 438 (776)
+|+++| +|+ +|. .......+++++|+++++++|+||||||||++++|||++ .+||+||||+|+....++
T Consensus 281 ~k~~~g~l~~~~~-~p~----~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~G 353 (845)
T 3abz_A 281 MIKFVVDNLEKTG-IVE----NGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSG 353 (845)
T ss_dssp HHHHHHHTHHHHC-CCT----TCCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSC
T ss_pred HHHHhCCcccccc-CCc----cCccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccC
Confidence 999999 998 442 221222378999999999999999999999999999986 479999999999987666
Q ss_pred CccCCC-CCccCCHHHHHHhhhc-CeeeecCCCCC------------------------------------C--------
Q 004054 439 GNYAGP-SCRSITPLQALQNYVE-NTVYYPGCDTV------------------------------------A-------- 472 (776)
Q Consensus 439 G~~~g~-~~~~~t~~~~l~~~~~-~~~~~~g~~~~------------------------------------~-------- 472 (776)
|+|+.. +.+.+||++||++++. .+.|..||... .
T Consensus 354 ggs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 433 (845)
T 3abz_A 354 GGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFH 433 (845)
T ss_dssp BSTTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSE
T ss_pred CCccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCccccccee
Confidence 666543 5678999999998753 25555544200 0
Q ss_pred --------------------------------------------------------------------------------
Q 004054 473 -------------------------------------------------------------------------------- 472 (776)
Q Consensus 473 -------------------------------------------------------------------------------- 472 (776)
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~ 513 (845)
T 3abz_A 434 VTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTK 513 (845)
T ss_dssp EEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBC
T ss_pred eeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcc
Confidence
Q ss_pred --------------------------------------------CC-cccHHHHHHHhhcCCEEEEEEecCCcccccccC
Q 004054 473 --------------------------------------------CS-SASIDKAVDIAKGADHVVLMMGLDQTQEKEELD 507 (776)
Q Consensus 473 --------------------------------------------~~-~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~D 507 (776)
.. ...+++|+++|++||+||||+|++..+|+||.|
T Consensus 514 ~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~D 593 (845)
T 3abz_A 514 ERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYD 593 (845)
T ss_dssp CEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBC
T ss_pred cceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCC
Confidence 00 023678899999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhcCCCEEEEEeCCCccccccccccCCcceEEeccCCCchhHHHHHHHHhCCCCCCccCcee
Q 004054 508 RVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGGRLPMT 587 (776)
Q Consensus 508 r~~l~Lp~~q~~Li~~va~~~~~pvIvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~nPsGkLPvT 587 (776)
|.+|.||+.|.+||++|+++ ++|||||+++|+|++|+|++ +++|||++||||||+|+||||||||++|||||||+|
T Consensus 594 R~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T 669 (845)
T 3abz_A 594 RENMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLS 669 (845)
T ss_dssp CSSSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSC
T ss_pred cccccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCcee
Confidence 99999999999999999999 89999999999999999884 799999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCC-C-----CCCCCCCCccccCC---CCccccCCCCCCCCCceee--cceeecccccccccccc
Q 004054 588 WYPQDYIKVPMTDMKMRP-Q-----ATSGNPGRTYRFYE---GKEVFPFGCGLSYSKYSYK--FKAVSQNKLYLNQSSST 656 (776)
Q Consensus 588 ~~p~~~~~~p~~~~~~~~-~-----~~~~~~g~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~l~~~~~~~~~~~~~~~ 656 (776)
| |++.+|+|.++ ++.. . .+..|. +||||+ .+|+||||||||||||+|| +++++ .
T Consensus 670 ~-p~~~~d~P~~~-~~~~~~g~~~y~eg~~v--gYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~-~---------- 734 (845)
T 3abz_A 670 W-PFKLQDNPAFL-NFKTEFGRVIYGEDIFV--GYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT-D---------- 734 (845)
T ss_dssp B-CSSGGGSTTTT-SCSCBTTEEECTTTTCC--THHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC-S----------
T ss_pred e-eCchhhCCccc-cCCCCCCceeccCCccC--CCcchhcCCCceeecccCCCcceeEEEeccccccc-C----------
Confidence 7 88888999753 2221 1 112233 599996 5799999999999999999 98742 1
Q ss_pred ccccccccccccccCCCCccccccceEEEEEEEEecC-CCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEE
Q 004054 657 KMVENQDVVHYKSVPELGTEFCETRKFLVTIGVKNHG-EMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEI 735 (776)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsv~VtNtG-~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V 735 (776)
+.++|+|+||||| +++|+||||||+++|.+++.+|.||||||+||.|+||||++|
T Consensus 735 ------------------------~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V 790 (845)
T 3abz_A 735 ------------------------DKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEKKTV 790 (845)
T ss_dssp ------------------------SEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCEEEE
T ss_pred ------------------------CeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCEEEE
Confidence 4699999999999 999999999999999999999999999999999999999999
Q ss_pred EEEec-CCCCceEEcCC-CcEEEeCcEEEEEEecCCCceEE
Q 004054 736 VFELS-PCESLSRARED-GLMVIEEGTHFLVVGDEEYPISI 774 (776)
Q Consensus 736 ~~~l~-~~~~ls~~d~~-~~~~~e~G~y~i~vG~~s~~~~~ 774 (776)
+|+|+ . ++|++||.. ++|++|+|+|+|+||+||+++.+
T Consensus 791 ~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG~ss~di~l 830 (845)
T 3abz_A 791 NIDLELK-DAISYFNEELGKWHVEAGEYLVSVGTSSDDILS 830 (845)
T ss_dssp EEEEEHH-HHHCEEETTTTEEEECSEEEEEEEESSTTCEEE
T ss_pred EEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEECCCCCcee
Confidence 99999 7 689999996 78999999999999999998864
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=2.5e-147 Score=1300.95 Aligned_cols=636 Identities=24% Similarity=0.365 Sum_probs=540.6
Q ss_pred hHHHHHHHHhcCCHHHHHhcccc----------cCCCCCCCCCCchhhhhhcccceeccCCcccccCccCCccccchhhh
Q 004054 52 ISQRARDLVSRLTLDEKISQLVN----------SAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVIL 121 (776)
Q Consensus 52 ~~~r~~~ll~~MTleEKv~ql~~----------~~~~~~rlgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~ 121 (776)
+++|+++||++||||||++||.+ .+++++|||||.+ +++|++||++.. .++|.||++++
T Consensus 12 a~~ra~~l~~~lTl~EK~~l~~g~~~~~~~~~~~~~~i~rlgiP~~-~~~Dg~~G~r~~----------~~~T~fP~~~~ 80 (713)
T 3zyz_A 12 AYDKAKAALAKLNLQDKVGIVSGVGWNGGPCVGNTSPASKISYPSL-CLQDGPLGVRYS----------TGSTAFTPGVQ 80 (713)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHBBCCTTCSSSSEEBCCBGGGTBCCC-EEECCTTSCTTC----------SSCCCCCCHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHhcCCCcccCccccccCCcCCCCCceE-EEEecCceEECC----------CCCCcCcCHHH
Confidence 78999999999999999999975 3678999999999 478999987531 25899999999
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHhhhcccccccee-eccccc-cCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhcCCC
Q 004054 122 TAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTF-WAPNIN-IFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTF 199 (776)
Q Consensus 122 lgAt~d~~l~~~~g~~~g~E~ra~~~~g~~~Gi~~-~aP~vd-i~r~p~~gr~~esfgeDp~l~~~~a~a~v~GlQ~~g~ 199 (776)
+|||||++|++++|+++|+|+|++ |+|+ |+|++| |.|||+|||++|+|||||+|+++|+.|||+|||++|
T Consensus 81 laat~d~~l~~~~g~~~g~E~ra~-------Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~g- 152 (713)
T 3zyz_A 81 AASTWDVNLIRERGQFIGEEVKAS-------GIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSVG- 152 (713)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHT-------TCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHTT-
T ss_pred HHhcCCHHHHHHHHHHHHHHHHhc-------CCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhCC-
Confidence 999999999999999999999999 9999 999999 889999999999999999999999999999999998
Q ss_pred CCCCCCCCceeeEeeccccccCCCCCCCCcceeeccccCHHHHHhccCchHHHHHHcCCccEEEeeccccCCcccccCHH
Q 004054 200 NGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRN 279 (776)
Q Consensus 200 ~~~~~~~~~~v~a~~KHFpg~g~~~~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ 279 (776)
|++|+|||||||++.+ |...++.+++++|+|+||+||+++|++|.. +||||||++||+|||.|++
T Consensus 153 ----------V~a~~KHF~g~g~e~~----r~~~~~~v~~~~l~e~~l~pF~~ai~ag~~-~VM~syn~vng~pa~~s~~ 217 (713)
T 3zyz_A 153 ----------VQATAKHYILNEQELN----RETISSNPDDRTLHELYTWPFADAVQANVA-SVMCSYNKVNTTWACEDQY 217 (713)
T ss_dssp ----------CEEEEEEETTCCCSTT----TTTCEECCCHHHHHHTTTHHHHHHHHTTCS-EEEECSSEETTEEGGGCHH
T ss_pred ----------eEEEEecCccCCcccc----CccccCcCCHHHHHHhhhHHHHHHHHcCCC-eEEeeccccCCccCcCCHH
Confidence 9999999999997654 444567789999999999999999998864 9999999999999999999
Q ss_pred HHHHHHHhhcCCCeEEEcCchhHHhhhcCccccCCHHHHHHHHHHcCCCccCcc--------hhHHHHHHHHHcCCCCHH
Q 004054 280 LLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGS--------FLQKHTKAAVKQKKLPES 351 (776)
Q Consensus 280 ll~~iLR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~--------~~~~~l~~av~~g~i~~~ 351 (776)
+|++|||+||||+|+|||||+++ +++++|++||+||+|+. .+.+.|.+||++|+|+++
T Consensus 218 ll~~iLR~e~GF~G~VvSD~~a~--------------~~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~ 283 (713)
T 3zyz_A 218 TLQTVLKDQLGFPGYVMTDWNAQ--------------HTTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTS 283 (713)
T ss_dssp HHCCCCCCCSCCCSEEEESTTCC--------------CCSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHcCCCEEEEecCccH--------------HHHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHH
Confidence 99999999999999999999853 23578999999999963 234889999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCCcCCCcccCCHHHHHHHHHHHhhhhhhhccCCCCCCCCCCCCCeEEEEccCC
Q 004054 352 EIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNA 431 (776)
Q Consensus 352 ~id~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~i~~~~~~~la~~~A~esiVLLKN~~~~LPL~~~~~~kIaviGp~a 431 (776)
+||+||+|||++|+++|+|+ ++. |..+. ....+++|+++++++|+||||||||++++|||++. +||+||||+|
T Consensus 284 ~id~av~RIL~~k~~lg~~~-~~~--~~~~~--~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A 356 (713)
T 3zyz_A 284 RVDDMVTRILAAWYLTGQDQ-AGY--PSFNI--SRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAA 356 (713)
T ss_dssp HHHHHHHHHHHHHHHTTTTS-TTC--CCCCT--TSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGG
T ss_pred HHHHHHHHHHHHHHHhCCcc-cCC--CCccc--ccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCc
Confidence 99999999999999999997 332 11111 12236799999999999999999999999999874 7999999998
Q ss_pred cccc-----------------ccCCccCC--CCCccCCHHHHHHhhhcC----eeeecCCCCCCCCcccHHHHHHHhhcC
Q 004054 432 NSAK-----------------TLLGNYAG--PSCRSITPLQALQNYVEN----TVYYPGCDTVACSSASIDKAVDIAKGA 488 (776)
Q Consensus 432 ~~~~-----------------~~~G~~~g--~~~~~~t~~~~l~~~~~~----~~~~~g~~~~~~~~~~~~~a~~~a~~a 488 (776)
+... ...|++++ .+++.+|++++|++++.. +.+.. +..+++|+++|+++
T Consensus 357 ~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~~--------~~~~~~a~~~A~~a 428 (713)
T 3zyz_A 357 IIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLSN--------TDNTSSGASAARGK 428 (713)
T ss_dssp SCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEEC--------SCCHHHHHHHHTTC
T ss_pred cccccccccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEeC--------CccHHHHHHHhhcC
Confidence 7421 11234444 355679999999987531 22221 14578999999999
Q ss_pred CEEEEEEecCCccccccc--------CCCCCCCChHHHHHHHHHHHhcCCCEEEEEeCCCcccc-ccccccCCcceEEec
Q 004054 489 DHVVLMMGLDQTQEKEEL--------DRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDI-TFAKYDRNIGSILWA 559 (776)
Q Consensus 489 D~vIv~~g~~~~~~~Eg~--------Dr~~l~Lp~~q~~Li~~va~~~~~pvIvVl~~g~P~~l-~~~~~~~~v~AiL~a 559 (776)
|++||++|. .++||. ||.+|.||+.|.+||++|+++ ++|+|||+++|+|++| +|+ +.++|+|||++
T Consensus 429 Dv~Iv~vg~---~~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~a 503 (713)
T 3zyz_A 429 DVAIVFITA---DSGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVWA 503 (713)
T ss_dssp SEEEEEEEE---CCBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEEC
T ss_pred CEEEEEecc---cCCCCccccccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEEc
Confidence 999999985 356776 999999999999999999998 8999999999999999 666 45689999999
Q ss_pred cCCCchhHHHHHHHHhCCCCCCccCceeecCCCCCCCCCCCCCCCCCCCCCCCC---CccccCCC---CccccCCCCCCC
Q 004054 560 GYPGEAGAVALAEVIFGDHNPGGRLPMTWYPQDYIKVPMTDMKMRPQATSGNPG---RTYRFYEG---KEVFPFGCGLSY 633 (776)
Q Consensus 560 ~~~G~e~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~p~~~~~~~~~~~~~~~g---~~Yr~~~~---~~~ypFG~GLSY 633 (776)
|||||++|+||||||||++|||||||+|| |++.+|+|... ++.+ ...|.+ ++||||+. +|+|||||||||
T Consensus 504 w~pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~~d~p~~~-~~~~--~~~y~eg~~vgYRy~d~~~~~plypFG~GLSY 579 (713)
T 3zyz_A 504 GLPSQESGNALVDVLWGDVSPSGKLVYTI-AKSPNDYNTRI-VSGG--SDSFSEGLFIDYKHFDDANITPRYEFGYGLSY 579 (713)
T ss_dssp CCCGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCGGGSSCCC-CCSS--EECCTTTTCCHHHHHHHTTCCCSBCTTCCBCS
T ss_pred CCCCchhhheehhhhcCCcCCCccCccee-cCChhhCCCcc-ccCC--ccccCCCCccCceeccCCCCceeecCCCCCCc
Confidence 99999999999999999999999999997 88788888532 2211 112322 47999985 799999999999
Q ss_pred CCceeecceeeccccccccccccccccccccccccccCCCCccccccceEEEEEEEEecCCCCCCceEEEEeecCCCCCC
Q 004054 634 SKYSYKFKAVSQNKLYLNQSSSTKMVENQDVVHYKSVPELGTEFCETRKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNG 713 (776)
Q Consensus 634 TtF~ys~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~ 713 (776)
|||+|++++++..... . .... .. . ..+..+++++.++|+|+|||||+++|+||||||+++|.+++.
T Consensus 580 TtF~ys~l~~~~~~~~---~------~~~~---~~-~-~gg~~~~~~~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~ 645 (713)
T 3zyz_A 580 TKFNYSRLSVLSTAKS---G------PATG---AV-V-PGGPSDLFQNVATVTVDIANSGQVTGAEVAQLYITYPSSAPR 645 (713)
T ss_dssp SCEEEEEEEEEECCCC---E------ECCS---CE-E-TTEETTTTSEEEEEEEEEEECSSSCEEEEEEEEEECCTTSSS
T ss_pred ccEEEeeeEecccccc---C------cccc---cc-c-ccccccccCCeEEEEEEEEeCCCCccceeeeeeeecCCCCCC
Confidence 9999999998653000 0 0000 00 0 000112334689999999999999999999999999999999
Q ss_pred CCcccccceeeEEeCCCCEEEEEEEecCCCCceEEcCC-CcEEEeCcEEEEEEecCCCceEE
Q 004054 714 RPIKQLVGFQSVILNAKEKAEIVFELSPCESLSRARED-GLMVIEEGTHFLVVGDEEYPISI 774 (776)
Q Consensus 714 ~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~-~~~~~e~G~y~i~vG~~s~~~~~ 774 (776)
+|.||||||+||.|+||||++|+|+|++ ++|++||.. ++|++|+|+|+|+||+||++|.+
T Consensus 646 ~P~k~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~d~~l 706 (713)
T 3zyz_A 646 TPPKQLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWVVPSGSFGISVGASSRDIRL 706 (713)
T ss_dssp CCSCEEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEEECCEEEEEEEESSSSCEEE
T ss_pred chhHHhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEEEcCceEEEEEECCCCCcce
Confidence 9999999999999999999999999998 799999985 78999999999999999999875
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=3.4e-145 Score=1290.45 Aligned_cols=626 Identities=30% Similarity=0.494 Sum_probs=541.2
Q ss_pred HHHHHHHhcCCHHHHHhcccc-------------------cCCCCCCCCCCchhhhhhcccceeccCCcccccCccCCcc
Q 004054 54 QRARDLVSRLTLDEKISQLVN-------------------SAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGAT 114 (776)
Q Consensus 54 ~r~~~ll~~MTleEKv~ql~~-------------------~~~~~~rlgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t 114 (776)
+|+++||++||||||++||.+ .+.+++|+|||.+ +++|++||++. ..+..+.....++|
T Consensus 2 ~r~~~ll~~mTleEK~~~l~g~~~~~~~g~~~~~~~g~~g~~~~v~rlgiP~~-~~~D~~~G~~~-~~~~~~~~~~~~~t 79 (721)
T 2x41_A 2 EKVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPAGLRI-NPTRENDENTYYTT 79 (721)
T ss_dssp CHHHHHHHHCCHHHHHHHTBCCCSTTSTTCCCCSSTTCSEECCCBGGGTBCCC-EEECCTTSCCC-CSCCTTCCCCCCCC
T ss_pred hhHHHHHHcCCHHHHHHHhcCCCCCccccccccccccccccccCcccCCCCCE-EEEcCCCCccc-cccccccccCCCcc
Confidence 589999999999999999986 4567899999999 68999999862 11111111123689
Q ss_pred ccchhhhhhhcCCHHHHHHHHHHHHHHHHHhhhcccccccee-eccccccCCCCCCCccccCCCCCHHHHHHHHHHHHHH
Q 004054 115 SFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTF-WAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRG 193 (776)
Q Consensus 115 ~fP~~~~lgAt~d~~l~~~~g~~~g~E~ra~~~~g~~~Gi~~-~aP~vdi~r~p~~gr~~esfgeDp~l~~~~a~a~v~G 193 (776)
.||+++++|||||++|++++|+++|+|+|++ |+|+ |+|++||.|||+|||++|||||||+|+++|+.|+|+|
T Consensus 80 ~fP~~~~laat~d~~l~~~~g~~~a~E~~a~-------Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G 152 (721)
T 2x41_A 80 AFPVEIMLASTWNRELLEEVGKAMGEEVREY-------GVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKG 152 (721)
T ss_dssp CCCCHHHHHHTCCHHHHHHHHHHHHHHHHHT-------TCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHH
T ss_pred cCCCHHHHhhcCCHHHHHHHHHHHHHHHHHh-------CCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9998 9999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCceeeEeeccccccCCCCCCCCcceeeccccCHHHHHhccCchHHHHHHcCCccEEEeeccccCCcc
Q 004054 194 VQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIP 273 (776)
Q Consensus 194 lQ~~g~~~~~~~~~~~v~a~~KHFpg~g~~~~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~p 273 (776)
||++| |++|+|||||||++. .|...++++++++|+|+||+||+++|+++.+++||||||++||+|
T Consensus 153 ~q~~g-----------V~a~~KHF~g~g~e~----~r~~~ds~~~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~p 217 (721)
T 2x41_A 153 VQSQG-----------VGACIKHFVANNQET----NRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKY 217 (721)
T ss_dssp HHTTT-----------CBCEEEEETTCCCCT----TTTTCEEECCHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEE
T ss_pred hhhCC-----------eEEEecccccCCCCC----CCCcccCCCCHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCcc
Confidence 99998 999999999999653 466677889999999999999999999444569999999999999
Q ss_pred cccCHHHHHHHHHhhcCCCeEEEcCchhHHhhhcCccccCCHHHHHHHHHHcCCCccCcc--hh--------HHHHHHHH
Q 004054 274 SCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGS--FL--------QKHTKAAV 343 (776)
Q Consensus 274 a~~s~~ll~~iLR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~--~~--------~~~l~~av 343 (776)
||+|+++|++|||+||||+|+|||||+++ +++++|++||+||+|+. .+ .+.|.+||
T Consensus 218 a~~s~~ll~~lLR~e~GF~G~VvSD~~~~--------------~~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av 283 (721)
T 2x41_A 218 CSQNEWLLKKVLREEWGFEGFVMSDWYAG--------------DNPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEAL 283 (721)
T ss_dssp GGGCHHHHTCCCCCCTCCCSEEEECTTCS--------------SCHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhcCCCEEEEccCchH--------------HHHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHH
Confidence 99999999999999999999999999865 23678999999999853 22 28899999
Q ss_pred HcCCCCHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCcCCCcccCCHHHHHHHHHHHhhhhhhhccCCCCCCCCCCCCCe
Q 004054 344 KQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVS 423 (776)
Q Consensus 344 ~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~i~~~~~~~la~~~A~esiVLLKN~~~~LPL~~~~~~k 423 (776)
++|+|++++||+||+|||++|+++|+|+ +|. + ...+++++|+++++++|+||||||||++ +|||++. +|
T Consensus 284 ~~G~i~~~~id~av~Ril~~k~~~gl~~-~~~---~----~~~~~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~k 352 (721)
T 2x41_A 284 KEGKLSEEVLDECVRNILKVLVNAPSFK-NYR---Y----SNKPDLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SK 352 (721)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHTTSGGGG-TCC---C----CSCCCHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CC
T ss_pred HcCCccHHHHHHHHHHHHHHHHHhCCCC-CCC---c----ccccCCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CE
Confidence 9999999999999999999999999998 441 1 2346789999999999999999999998 9999874 79
Q ss_pred EEEEccCCccccccCCccCC--CCCccCCHHHHHHhh-hc-----Ceeee-------------cC---CCC---CCCCcc
Q 004054 424 LALIGPNANSAKTLLGNYAG--PSCRSITPLQALQNY-VE-----NTVYY-------------PG---CDT---VACSSA 476 (776)
Q Consensus 424 IaviGp~a~~~~~~~G~~~g--~~~~~~t~~~~l~~~-~~-----~~~~~-------------~g---~~~---~~~~~~ 476 (776)
|+||||+++.... .|++++ .+.+.+|++++|+++ +. .+.|. .| +.. ...+..
T Consensus 353 IaviG~~A~~~~~-~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 431 (721)
T 2x41_A 353 IALFGTGQIETIK-GGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPEN 431 (721)
T ss_dssp EEEESGGGTSCCC-SCBSTTCCCCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSC
T ss_pred EEEEecCCcCccc-cCCCCCCcCcCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceeccccCCCchh
Confidence 9999999988754 333333 566789999999987 43 24565 45 321 011224
Q ss_pred cH--HHHHHHhhcCCEEEEEEecCCcccccccCCC----CCCCChHHHHHHHHHH----HhcCCCEEEEEeCCCcccc-c
Q 004054 477 SI--DKAVDIAKGADHVVLMMGLDQTQEKEELDRV----DLVLPGRQQELITRVA----EAAKKPVILVLLCGGPVDI-T 545 (776)
Q Consensus 477 ~~--~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~----~l~Lp~~q~~Li~~va----~~~~~pvIvVl~~g~P~~l-~ 545 (776)
.+ ++++++|+++|+|||++|.+ ++|+.||. +|.||+.|.+||++|+ ++ ++|||||+++|+|++| +
T Consensus 432 ~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~-~~~vVVVl~~g~P~~l~~ 507 (721)
T 2x41_A 432 FLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQ-GKKVIVLLNIGSPVEVVS 507 (721)
T ss_dssp CSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHT-TCCEEEEEECSSCCCCTT
T ss_pred hhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCCceEccc
Confidence 45 78999999999999999976 78999999 9999999999999999 77 8999999999999999 6
Q ss_pred cccccCCcceEEeccCCCchhHHHHHHHHhCCCCCCccCceeecCCCCCCCCCCCCCCCCCCC-----CCCC-C--Cccc
Q 004054 546 FAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGGRLPMTWYPQDYIKVPMTDMKMRPQAT-----SGNP-G--RTYR 617 (776)
Q Consensus 546 ~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~p~~~~~~~~~~~-----~~~~-g--~~Yr 617 (776)
|. ++++|||++|+||+++|+|+||||||++|||||||+|| |+++.|+|. + ++..... ..|. | .+||
T Consensus 508 ~~---~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p~~~~~~p~-~-~~~~~~~~~~~~~~y~eg~~vgYr 581 (721)
T 2x41_A 508 WR---DLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-PRDYSDVPS-W-TFPGEPKDNPQKVVYEEDIYVGYR 581 (721)
T ss_dssp TG---GGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-ESSGGGCSC-T-TTTCBSTTSCSEEECTTTTCCTHH
T ss_pred hh---hcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-cCccccCcc-c-cCCCCCccccccccccCCcccccc
Confidence 65 47999999999999999999999999999999999997 888889997 3 2211110 1222 1 3699
Q ss_pred cCCC---CccccCCCCCCCCCceeecceeeccccccccccccccccccccccccccCCCCccccccceEEEEEEEEecCC
Q 004054 618 FYEG---KEVFPFGCGLSYSKYSYKFKAVSQNKLYLNQSSSTKMVENQDVVHYKSVPELGTEFCETRKFLVTIGVKNHGE 694 (776)
Q Consensus 618 ~~~~---~~~ypFG~GLSYTtF~ys~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsv~VtNtG~ 694 (776)
||+. +|+||||||||||||+||+++++.. + +.++|+|+|||||+
T Consensus 582 y~d~~~~~plypFG~GLSYTtF~ys~~~~~~~----------------~-----------------~~~~v~v~VtNtG~ 628 (721)
T 2x41_A 582 YYDTFGVEPAYEFGYGLSYTTFEYSDLNVSFD----------------G-----------------ETLRVQYRIENTGG 628 (721)
T ss_dssp HHHHHTCCEEECTTCCBCSSCEEEEEEEEEEC----------------S-----------------SEEEEEEEEEECSS
T ss_pred eeecCCCceeeccCCCCCcceeEeeceEeecC----------------C-----------------CeEEEEEEEEECCC
Confidence 9973 7999999999999999999986431 1 57999999999999
Q ss_pred CCCCceEEEEeecCCCCCCCCcccccceeeE-EeCCCCEEEEEEEecCCCCceEEcCCCcEEEeCcEEEEEEecCCCceE
Q 004054 695 MAGKHPVLLFVKPARRGNGRPIKQLVGFQSV-ILNAKEKAEIVFELSPCESLSRAREDGLMVIEEGTHFLVVGDEEYPIS 773 (776)
Q Consensus 695 ~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG~~s~~~~ 773 (776)
++|+||||||+++|.+++.+|.||||||+|| .|+||||++|+|+|++ ++|++|| .++|++|+|+|+|+||+||+++.
T Consensus 629 ~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~-~~l~~~d-~~~~~~e~G~y~v~vG~ss~d~~ 706 (721)
T 2x41_A 629 RAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN-GEEWVVEAGEYEVRVGASSRNIK 706 (721)
T ss_dssp SCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG-GGGCEEC-SSCEEECCEEEEEEEEEETTEEE
T ss_pred CCCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEECH-HHhcEEc-CCeEEEeCceEEEEEECCCCCcc
Confidence 9999999999999999999999999999999 8999999999999998 7999999 99999999999999999999885
Q ss_pred E
Q 004054 774 I 774 (776)
Q Consensus 774 ~ 774 (776)
+
T Consensus 707 ~ 707 (721)
T 2x41_A 707 L 707 (721)
T ss_dssp E
T ss_pred e
Confidence 3
No 4
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=8.1e-116 Score=1019.85 Aligned_cols=528 Identities=29% Similarity=0.476 Sum_probs=450.1
Q ss_pred CCCCCCCChHHHHHHHHhcCCHHHHHhcccccC------------------------C--------------------CC
Q 004054 44 PFCKTTLPISQRARDLVSRLTLDEKISQLVNSA------------------------P--------------------AI 79 (776)
Q Consensus 44 ~~~d~~~~~~~r~~~ll~~MTleEKv~ql~~~~------------------------~--------------------~~ 79 (776)
||+|++++.++|+++||++|||||||+||++.. + ..
T Consensus 4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~ 83 (602)
T 1x38_A 4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS 83 (602)
T ss_dssp GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999999999997410 0 14
Q ss_pred CCCCCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCCHHHHHHHHHHHHHHHHHhhhcccccccee-ec
Q 004054 80 PRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTF-WA 158 (776)
Q Consensus 80 ~rlgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d~~l~~~~g~~~g~E~ra~~~~g~~~Gi~~-~a 158 (776)
+|+|||.+ ++.|++||+... .++|.||+++++|||||++|++++|+++|+|+|++ |||+ |+
T Consensus 84 ~rlgiP~l-~~~D~~~G~~~~----------~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~-------Gi~~~~a 145 (602)
T 1x38_A 84 TRLGIPMI-YGIDAVHGQNNV----------YGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT-------GIQYAFA 145 (602)
T ss_dssp SSSCCCCE-EEECCSSSSTTS----------TTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT-------TCCEECC
T ss_pred ccCCCCcE-EEEcCCCceeCC----------CCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHc-------CCCEEee
Confidence 68899988 789999997521 25899999999999999999999999999999999 9999 99
Q ss_pred cccccCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhcCCCCCC----CC-CCCceeeEeeccccccCCCCCCCCcceee
Q 004054 159 PNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGG----KL-KGKLQASACCKHFTAYDLDNWKGTTRYKF 233 (776)
Q Consensus 159 P~vdi~r~p~~gr~~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~----~~-~~~~~v~a~~KHFpg~g~~~~~~~~~~~~ 233 (776)
|++||.|||+|||++|||||||+++++|+. ||+|+|+....+- .. .+..+|++|+|||||||.+.. ++...
T Consensus 146 P~vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~---~~~~~ 221 (602)
T 1x38_A 146 PCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVD---GINEN 221 (602)
T ss_dssp CBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGG---GCTTC
T ss_pred ceeccccCCCcCccccCcCCCHHHHHHHHH-HHHHhcCCCccccccccccccccCCeEEEeccccCCCcccc---Ccccc
Confidence 999999999999999999999999999999 9999998310000 00 001249999999999996532 22333
Q ss_pred ccccCHHHHHhccCchHHHHHHcCCccEEEeeccccCCcccccCHHHHHHHHHhhcCCCeEEEcCchhHHhhhcCccccC
Q 004054 234 DARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAK 313 (776)
Q Consensus 234 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~iLR~e~gf~G~VvSD~~~~~~~~~~~~~~~ 313 (776)
++.+++++|+|+||+||+++|++|. .+||||||.+||+|||+|+++|+++||+||||+|+|||||++|.++...|+ .
T Consensus 222 ~~~~~~~~l~e~~l~pF~~ai~ag~-~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~--~ 298 (602)
T 1x38_A 222 NTIINREGLMNIHMPAYKNAMDKGV-STVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAG--S 298 (602)
T ss_dssp EECCCHHHHHHHTSHHHHHHHHTTC-CEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTT--T
T ss_pred cCcCCHHHHHHHHHHHHHHHHHcCC-CEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcC--C
Confidence 5678999999999999999999885 599999999999999999999999999999999999999999998875554 4
Q ss_pred CHHHHHHHHHHcCCCccCcc----hhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCcCC-CcccC
Q 004054 314 SPEDAVVDVLKAGMDVNCGS----FLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIG-ADVVC 388 (776)
Q Consensus 314 ~~~ea~~~al~AG~D~~~~~----~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~~~~~~~-~~~i~ 388 (776)
+..+++++|++||+||+|.+ .+.+.|.+||++|+|++++||+||+|||++|+++|+|+ +| |.+.. ...++
T Consensus 299 ~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p----~~~~~~~~~~~ 373 (602)
T 1x38_A 299 DYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NP----YADPAMAEQLG 373 (602)
T ss_dssp THHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CC----SCCGGGGGGTT
T ss_pred CHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CC----CCCcchhhccC
Confidence 67899999999999999863 34578999999999999999999999999999999999 54 32221 23578
Q ss_pred CHHHHHHHHHHHhhhhhhhccCC--C---CCCCCCCCCCeEEEEccCCccccccCCccCC-------CCCccCCHHHHHH
Q 004054 389 SPAHQVLALQAAQDGIVLLKNSH--G---LLPLPKSKSVSLALIGPNANSAKTLLGNYAG-------PSCRSITPLQALQ 456 (776)
Q Consensus 389 ~~~~~~la~~~A~esiVLLKN~~--~---~LPL~~~~~~kIaviGp~a~~~~~~~G~~~g-------~~~~~~t~~~~l~ 456 (776)
+++|+++++++|+||||||||++ + +|||++. .+||+||||+++....++|+|+. .+...+|++++|+
T Consensus 374 ~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t~~~~l~ 452 (602)
T 1x38_A 374 KQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVK 452 (602)
T ss_dssp CHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBCHHHHHH
T ss_pred CHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCcccHHHHHH
Confidence 99999999999999999999997 4 9999874 57999999999986555666532 2455689999999
Q ss_pred hhhc---CeeeecCCCCCCCCcccHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHHhcCCCEE
Q 004054 457 NYVE---NTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVI 533 (776)
Q Consensus 457 ~~~~---~~~~~~g~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~~~~~pvI 533 (776)
+... .+.|..++. . ++. .++++|++||++|.+...++|| ||.+|.||+.|.+||+++++ ++|+|
T Consensus 453 ~~~~~~~~v~~~~~~~--------~-~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~--~~~~V 519 (602)
T 1x38_A 453 AAVDPSTVVVFAENPD--------A-EFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG--GVRCA 519 (602)
T ss_dssp HHSCTTCEEEEESSCC--------H-HHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT--TSCEE
T ss_pred HHhCCCeEEEEcCCCC--------H-HHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh--CCCEE
Confidence 8643 356666542 1 222 3899999999999888888898 99999999999999999987 68999
Q ss_pred EEEeCCCccccccccccCCcceEEeccCCCchhHHHHHHHHhCCCCCCccCceeecCCCCCCCCCCCCCCCCCCCCCCCC
Q 004054 534 LVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGGRLPMTWYPQDYIKVPMTDMKMRPQATSGNPG 613 (776)
Q Consensus 534 vVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~p~~~~~~~~~~~~~~~g 613 (776)
||+++|+|++|.++. ++++|||++|+||+++ +|+||||||++|||||||+|| |++.+|+|.+ .
T Consensus 520 vVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~-p~~~~~~p~~------------~- 582 (602)
T 1x38_A 520 TVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTW-FKSVDQLPMN------------V- 582 (602)
T ss_dssp EEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCB-CSCGGGCSCC------------T-
T ss_pred EEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCcccc-cCccccCCcc------------C-
Confidence 999999999996543 4899999999999997 999999999999999999997 8878888862 1
Q ss_pred CccccCCCCccccCCCCCCCCC
Q 004054 614 RTYRFYEGKEVFPFGCGLSYSK 635 (776)
Q Consensus 614 ~~Yr~~~~~~~ypFG~GLSYTt 635 (776)
+||||+ |+||||||||||+
T Consensus 583 -g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 583 -GDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp -TCSSCC--CSBCTTCCBCCCC
T ss_pred -CCCCCC--ccCcCCCCcCCCC
Confidence 388885 9999999999996
No 5
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=1.2e-115 Score=1031.00 Aligned_cols=521 Identities=26% Similarity=0.424 Sum_probs=438.2
Q ss_pred CChHHHHHHHHhcCCHHHHHhcccccC--------------------CC-----------------------------CC
Q 004054 50 LPISQRARDLVSRLTLDEKISQLVNSA--------------------PA-----------------------------IP 80 (776)
Q Consensus 50 ~~~~~r~~~ll~~MTleEKv~ql~~~~--------------------~~-----------------------------~~ 80 (776)
.+.++||++||++||||||||||++.. .. ..
T Consensus 20 ~~~~~rV~~ll~~MTLeEKiGQL~~~~~~~~~~~~i~~~~vGgvi~~~~~~p~~~~~~s~~q~~~l~~~lq~~a~~~~~~ 99 (822)
T 3rrx_A 20 PAVEAQIEKLLAKMTIEQKVAQMIQPEIGYLTVEQMRKYGFGSYLNGGNTAPYGNKRADQATWLKYADEMYLAAMDSTLD 99 (822)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHEECBTTTCCHHHHHHHCCSEEEECSSSCGGGCSSCCHHHHHHHHHHHHHHHHCCTTT
T ss_pred ccHHHHHHHHHHcCCHHHHHhCccccccCCCCHHHHHhCCCceEEECCccCccccccCCHHHHHHHHHHHHHHHHhhhcc
Confidence 368999999999999999999997520 00 13
Q ss_pred CCCCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCCHHHHHHHHHHHHHHHHHhhhcccccccee-ecc
Q 004054 81 RLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTF-WAP 159 (776)
Q Consensus 81 rlgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d~~l~~~~g~~~g~E~ra~~~~g~~~Gi~~-~aP 159 (776)
|+|||.+ ++.|++||+... .++|.||+++++|||||++|++++|+++|+|+|++ |||+ |+|
T Consensus 100 rlgIPll-~~~D~~~G~~~~----------~~aT~FP~~i~laAt~d~~L~~~~g~~ia~E~ra~-------Gin~~~aP 161 (822)
T 3rrx_A 100 GIAIPTV-WGTDAMHGHSNV----------YGATLFPHNIGLGAARDTDLIKRIGQATAKEVAAT-------GIEWSFAP 161 (822)
T ss_dssp CCCCCCE-EEEECTTSSTTS----------TTCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHTT-------TCCEEEEE
T ss_pred cCCCCeE-EEeccCCcEEcc----------CCCCCCcCHHHHhhcCCHHHHHHHHHHHHHHHHhc-------CCcEeecc
Confidence 6899988 789999997521 25899999999999999999999999999999999 9999 999
Q ss_pred ccccCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceeeEeeccccccCCCCCCCCcceeeccccCH
Q 004054 160 NINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTM 239 (776)
Q Consensus 160 ~vdi~r~p~~gr~~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~~~~~~~~v~a~~KHFpg~g~~~~~~~~~~~~~~~~~~ 239 (776)
++||.|||+|||++|+|||||+|+++|+.|||+|||+.... ...+..+|++|+|||||||... .+|...++.+++
T Consensus 162 vvDv~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~--~~~~~~gV~a~~KHFpG~G~~~---~~r~~~~~~vs~ 236 (822)
T 3rrx_A 162 TVAVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGA--DFLKGSNRIATAKHFVGDGGTE---RGVDRGNTLIDE 236 (822)
T ss_dssp ECCCCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSST--TTTCTTCCEEEEEEESCGGGBG---GGCTTCEECCCH
T ss_pred ccccccCCCcCccccCCCCCHHHHHHHHHHHHHHHhccccc--ccccCCCeEEEeeeccCCCccc---cCccCccCcCCH
Confidence 99999999999999999999999999999999999986100 0011235999999999998432 133334567899
Q ss_pred HHHHhccCchHHHHHHcCCccEEEeeccccCCcccccCHHHHHHHHHhhcCCCeEEEcCchhHHhhhcCccccCCHHHHH
Q 004054 240 QDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAV 319 (776)
Q Consensus 240 ~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~iLR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~ 319 (776)
++|+|+||+||+++|++|.. +||||||.+||+|+|.|+++|++|||+||||+|+|||||++|..+.+ +..+++
T Consensus 237 ~~L~e~~L~PF~~aI~ag~~-sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~------~~~ea~ 309 (822)
T 3rrx_A 237 KGLRDIHSAGYFSAINQGVQ-SVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG------CDLEQC 309 (822)
T ss_dssp HHHHHTTSHHHHHHHHTTCS-EEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT------CBTTBC
T ss_pred HHHHHHhhHHHHHHHHcCCC-EEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC------ChHHHH
Confidence 99999999999999998865 99999999999999999999999999999999999999999987643 234677
Q ss_pred HHHHHcCCCccCcch----hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccCCCCCC--CCCCcCCCcccCCHHHH
Q 004054 320 VDVLKAGMDVNCGSF----LQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTM--QPFGKIGADVVCSPAHQ 393 (776)
Q Consensus 320 ~~al~AG~D~~~~~~----~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~--~~~~~~~~~~i~~~~~~ 393 (776)
++|++||+||+|.+. +.+.|.+||++|+|+++|||+||+|||++|+++|||+ +|.. .++.. ....+++++|+
T Consensus 310 ~~Al~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~~v~~~eh~ 387 (822)
T 3rrx_A 310 AQAINAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQWLGAAEHR 387 (822)
T ss_dssp HHHHHHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGGGTTCHHHH
T ss_pred HHHHHcCCCEECCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-cccccCCHHHH
Confidence 899999999999642 4578999999999999999999999999999999999 4421 11211 12457899999
Q ss_pred HHHHHHHhhhhhhhccCCCCCCCCCCCCCeEEEEccCCccccccCCccC----CC------CCccCCHHHHHHhhhc---
Q 004054 394 VLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYA----GP------SCRSITPLQALQNYVE--- 460 (776)
Q Consensus 394 ~la~~~A~esiVLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~----g~------~~~~~t~~~~l~~~~~--- 460 (776)
++++++|+||||||||++++|||++. +||+||||+|++...+.|+|+ |. .++.+|++++|++++.
T Consensus 388 ~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~ 465 (822)
T 3rrx_A 388 TLAREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAG 465 (822)
T ss_dssp HHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTT
T ss_pred HHHHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcC
Confidence 99999999999999999899999874 699999999998766677764 21 2357899999998753
Q ss_pred -CeeeecCCCCCCCCcccHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCC---hHHHHHHHHHHHhcCCCEEEEE
Q 004054 461 -NTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLP---GRQQELITRVAEAAKKPVILVL 536 (776)
Q Consensus 461 -~~~~~~g~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp---~~q~~Li~~va~~~~~pvIvVl 536 (776)
.+.|.... +.++++|++||++|++...|++| ||.+|.|| +.|.+||+++++. ++|||||+
T Consensus 466 ~~v~~~~~~--------------~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a~-g~pvVvVl 529 (822)
T 3rrx_A 466 GKITLSESG--------------EYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKAD-NIPVVTVF 529 (822)
T ss_dssp CEEEECTTC--------------CCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHHT-TCCEEEEE
T ss_pred CeEEEcccc--------------cccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHHh-CCCEEEEE
Confidence 13332110 24689999999999987777776 99999999 6899999999998 89999999
Q ss_pred eCCCccccccccccCCcceEEeccCCCchhHHHHHHHHhCCC------CCCccCceeecCCCCCCCCCCCCCCCCCCCCC
Q 004054 537 LCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDH------NPGGRLPMTWYPQDYIKVPMTDMKMRPQATSG 610 (776)
Q Consensus 537 ~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~------nPsGkLPvT~~p~~~~~~p~~~~~~~~~~~~~ 610 (776)
++|+|+.|.++. ++++|||++||||++++ ||||||||++ |||||||+|| |++.+|+|+.+.
T Consensus 530 ~sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~~~q~P~~~~--------- 596 (822)
T 3rrx_A 530 LSGRPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKYDDQFTLNLN--------- 596 (822)
T ss_dssp ECSSCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSSTTCTTCCTT---------
T ss_pred eCCcceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCCcccCCcccC---------
Confidence 999999997554 37999999999999987 9999999997 9999999997 888899996210
Q ss_pred CCCCccccCCCCccccCCCCCCCCCceeec
Q 004054 611 NPGRTYRFYEGKEVFPFGCGLSYSKYSYKF 640 (776)
Q Consensus 611 ~~g~~Yr~~~~~~~ypFG~GLSYTtF~ys~ 640 (776)
+.+| +|+||||||||||||+|..
T Consensus 597 -----~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 597 -----DADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp -----CSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred -----CCCC--ccccCCCCCcCCCCCcccc
Confidence 1122 7999999999999999965
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=6.5e-104 Score=924.97 Aligned_cols=498 Identities=21% Similarity=0.310 Sum_probs=406.4
Q ss_pred CCChHHHHHHHHhcCCHHHHHhcccccCC-------------C-------------------------------------
Q 004054 49 TLPISQRARDLVSRLTLDEKISQLVNSAP-------------A------------------------------------- 78 (776)
Q Consensus 49 ~~~~~~r~~~ll~~MTleEKv~ql~~~~~-------------~------------------------------------- 78 (776)
+.+.++||++||++||||||||||++... +
T Consensus 28 ~~~~~~rv~~ll~~MTleEKiGQl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vGgvil~~~n~~~~~q~~~l~~ 107 (642)
T 3bmx_A 28 ASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTD 107 (642)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHTEECBCSEECCTTCSSCEECCSCCHHHHHHHHHHCCSEEECCGGGCSSHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCHHHHHhCceeecccccccccccccCCCCCCcHHHHHHHHhCCCcEEEECCCCCCCHHHHHHHHH
Confidence 35679999999999999999999965210 0
Q ss_pred -C--CCCCCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCCHHHHHHHHHHHHHHHHHhhhccccccce
Q 004054 79 -I--PRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMT 155 (776)
Q Consensus 79 -~--~rlgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d~~l~~~~g~~~g~E~ra~~~~g~~~Gi~ 155 (776)
+ .+++||.+ +..|++||... ++ ...|.||+++++|||||++|++++|+++|+|+|++ |||
T Consensus 108 ~lq~~~~~iPll-i~~D~e~G~v~-----r~----~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~-------Gi~ 170 (642)
T 3bmx_A 108 DYQKASPKIPLM-LSIDQEGGIVT-----RL----GEGTNFPGNMALGAARSRINAYQTGSIIGKELSAL-------GIN 170 (642)
T ss_dssp HHHHHCSSSCCE-EEECCCBTTBC-----CC----SSSCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH-------TCC
T ss_pred HHHHHhcCCCcE-EEEcCCCCcee-----cC----CCCCCCCCHHHHHhhCCHHHHHHHHHHHHHHHHHc-------CCC
Confidence 0 14567766 46666666431 11 12499999999999999999999999999999999 999
Q ss_pred e-eccccccCCCCCCCc-cccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceeeEeeccccccCCC---CCCCCcc
Q 004054 156 F-WAPNINIFRDPRWGR-GQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLD---NWKGTTR 230 (776)
Q Consensus 156 ~-~aP~vdi~r~p~~gr-~~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~~~~~~~~v~a~~KHFpg~g~~---~~~~~~~ 230 (776)
+ |+|++||.|||+||| ++|+|||||+++++|+.|||+|||++| |++|+|||||||.. +|.+.++
T Consensus 171 ~~~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~g-----------V~a~~KHFpg~g~~~~dsh~~~~~ 239 (642)
T 3bmx_A 171 TDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQD-----------IASALKHFPGHGDTDVDSHYGLPL 239 (642)
T ss_dssp EECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHTT-----------CEEEEEEETCCTTCSSCTTTSCCB
T ss_pred EEECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhCC-----------ceEEeccccCCCCccCCCCCCCce
Confidence 9 999999999999996 799999999999999999999999998 99999999999854 3333332
Q ss_pred eeeccccCHHHHHhccCchHHHHHHcCCccEEEee---ccccC-------------CcccccCHHHHHHHHHhhcCCCeE
Q 004054 231 YKFDARVTMQDLADTYQPPFESCVKQGRASGIMCA---YNRVN-------------GIPSCADRNLLSKTARRQWGFHGY 294 (776)
Q Consensus 231 ~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vn-------------g~pa~~s~~ll~~iLR~e~gf~G~ 294 (776)
+.+++++|+|+||+||+++|++|. ++|||| |+.+| |+|||+|+++|++|||+||||+|+
T Consensus 240 ----~~~~~~~l~e~~l~PF~~ai~ag~-~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~ 314 (642)
T 3bmx_A 240 ----VSHGQERLREVELYPFQKAIDAGA-DMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGV 314 (642)
T ss_dssp ----CCCCHHHHHHTTHHHHHHHHHTTC-CEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSE
T ss_pred ----eccCHHHHhhhhHHHHHHHHHcCC-CEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEE
Confidence 346899999999999999999886 599999 66777 799999999999999999999999
Q ss_pred EEcCchhHHhhhcCccccCCHHHHHHHHHHcCCCccCcc-------------hhHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 004054 295 ITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGS-------------FLQKHTKAAVKQKKLPESEIDRALHNLF 361 (776)
Q Consensus 295 VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~-------------~~~~~l~~av~~g~i~~~~id~av~Ril 361 (776)
|||||++|+++... .+..+++++|++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||
T Consensus 315 VvSD~~~m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL 390 (642)
T 3bmx_A 315 IVTDALNMKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERII 390 (642)
T ss_dssp EECSCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred EEeCchhhHHHHhc----CCHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHH
Confidence 99999999988752 367899999999999999543 3457899999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCCCcCC------CcccCCHHHHHHHHHHHhhhhhhhccCCCCCCCCCCCCCeEEEEccCCcccc
Q 004054 362 SVRMRLGLFNGNPTMQPFGKIG------ADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAK 435 (776)
Q Consensus 362 ~~k~~~Glf~~~p~~~~~~~~~------~~~i~~~~~~~la~~~A~esiVLLKN~~~~LPL~~~~~~kIaviGp~a~~~~ 435 (776)
++|+++|+|+..| |.+.. ...+++++|+++++++|+||||||||++++|||++.+.+||+||||++..
T Consensus 391 ~~k~~~gl~~~~p----~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~-- 464 (642)
T 3bmx_A 391 SLKIKRGMYPARN----SDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ-- 464 (642)
T ss_dssp HHHHHTTCSSCCC----CCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH--
T ss_pred HHHHHcCCCcCCC----CcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc--
Confidence 9999999999424 33210 23478999999999999999999999989999986446799999998532
Q ss_pred ccCCccCCCCCccCCHHHHHHhhhc--CeeeecCCCCCCCCcccHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCC
Q 004054 436 TLLGNYAGPSCRSITPLQALQNYVE--NTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVL 513 (776)
Q Consensus 436 ~~~G~~~g~~~~~~t~~~~l~~~~~--~~~~~~g~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~L 513 (776)
..+++++|+++.. ...+..++.........++++++.++++|+|||+++.......| ++.+
T Consensus 465 ------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l 527 (642)
T 3bmx_A 465 ------------TASIEQTIHDLIKRKKIKPVSLSKMNFASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGV 527 (642)
T ss_dssp ------------HHHHHHHHHHHHHTTSSCCCEEEEEECTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTE
T ss_pred ------------hhhHHHHHHHhhCCCCeeEEeccCCCCcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCC
Confidence 2568899988752 22333232111111134678899999999999966532111122 3446
Q ss_pred ChHH------------HHHHHHHHHhcCCCEEEEEeCCCccccccccccCCcceEEeccCC--------CchhHHHHHHH
Q 004054 514 PGRQ------------QELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYP--------GEAGAVALAEV 573 (776)
Q Consensus 514 p~~q------------~~Li~~va~~~~~pvIvVl~~g~P~~l~~~~~~~~v~AiL~a~~~--------G~e~g~AlAdV 573 (776)
|+.| .+||+++++. ++|+|||++ |+||+++|+. +++|||++|++ |+++|+|+|||
T Consensus 528 ~~~q~~~~~~~~~~~~~~li~~~~~~-~~pvVvv~~-g~P~~l~~~~---~~~Ail~a~~~~G~~~g~~g~~~g~Aiadv 602 (642)
T 3bmx_A 528 IDDTISDSSKWATVFPRAVMKAALQH-NKPFVLMSL-RNPYDAANFE---EAKALIAVYGFKGYANGRYLQPNIPAGVMA 602 (642)
T ss_dssp ECCCCCSSTTHHHHHHHHHHHHHHHT-TCCEEEEEC-SCGGGGGGCT---TCSEEEECSCCCCEETTEESCSHHHHHHHH
T ss_pred ccccccccccccchhHHHHHHHHHHc-CCCEEEEec-CChhcccccc---ccCeEEEEccCcccccccccchHHHHHHHH
Confidence 6667 8999999886 899988765 9999999874 69999999999 79999999999
Q ss_pred HhCCCCCCccCceeecCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCCce
Q 004054 574 IFGDHNPGGRLPMTWYPQDYIKVPMTDMKMRPQATSGNPGRTYRFYEGKEVFPFGCGLSYSKYS 637 (776)
Q Consensus 574 L~G~~nPsGkLPvT~~p~~~~~~p~~~~~~~~~~~~~~~g~~Yr~~~~~~~ypFG~GLSYTtF~ 637 (776)
|||++|||||||+|| |++. ++ ++|+||||||||||+|.
T Consensus 603 LfG~~nPsGkLPvt~-p~~~-----------------~~--------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 603 IFGQAKPKGTLPVDI-PSVT-----------------KP--------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp HTTSSCCCCCCSSCE-ECSS-----------------ST--------TSEEECTTCCBCTTTCS
T ss_pred HcCCCCCCccCceee-eccC-----------------CC--------CCcccCCCCCccCCCCC
Confidence 999999999999998 5522 11 26999999999999984
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=2.1e-74 Score=652.27 Aligned_cols=419 Identities=17% Similarity=0.191 Sum_probs=317.1
Q ss_pred CCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCCH------HHHHHHHHHHHHHHHHhhhcccccccee
Q 004054 83 GIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDS------YLWYRIGQAIGLEARALYNAGQAIGMTF 156 (776)
Q Consensus 83 gip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d~------~l~~~~g~~~g~E~ra~~~~g~~~Gi~~ 156 (776)
|||.+ +..|++||.. .++ .++|.||+++++|||||. ++++++|+++|+|+|++ |+|+
T Consensus 83 giPll-i~~D~egG~v-----~rl----~~~T~fP~~~alaat~~~d~~~~~~La~~~G~~~a~Elra~-------Gin~ 145 (535)
T 3sql_A 83 EIPLL-IAADIEEGVG-----QRF----RGATEFPPPMAFGEIWRTDPHQAIALAETMGATTAQEALSL-------GINW 145 (535)
T ss_dssp SSCCE-EEECCSSCHH-----HHS----TTSCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-------TCCE
T ss_pred CCCeE-EEeccCCCce-----eec----CCCCCCCCHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHh-------CCCE
Confidence 55655 4555555542 122 358999999999999955 78999999999999999 9999
Q ss_pred -eccccccCCCCCCC-ccccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceeeEeeccccccCCCCCCCCcceeec
Q 004054 157 -WAPNINIFRDPRWG-RGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFD 234 (776)
Q Consensus 157 -~aP~vdi~r~p~~g-r~~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~~~~~~~~v~a~~KHFpg~g~~~~~~~~~~~~~ 234 (776)
|+|++||.|||+|| |++|||||||+++++|+.|||+|+|+.| |++|+|||||||....+.+-.. ..
T Consensus 146 ~fAPvvDv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~g-----------V~a~~KHFpG~G~~~~Dsh~~~-~~ 213 (535)
T 3sql_A 146 VLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQYA-----------VLTTAKHFPGHGDTATDSHLAL-PT 213 (535)
T ss_dssp ECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTSS-----------CBCEEEEETCCCSCSCCTTTSC-CB
T ss_pred EecCeeccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhcc-----------cceeeeeecccCCcccCCccCC-Cc
Confidence 99999999999999 7899999999999999999999999998 9999999999995432222111 12
Q ss_pred cccCHHHHHhccCchHHHHHHcCCccEEEeeccccC----CcccccCHHHHHHHHHhhcCCCeEEEcCchhHHhhhcCcc
Q 004054 235 ARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVN----GIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEG 310 (776)
Q Consensus 235 ~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vn----g~pa~~s~~ll~~iLR~e~gf~G~VvSD~~~~~~~~~~~~ 310 (776)
+..++++|+|+||+||+++|++|. ++||||||.+| ++|||+|+++|+++||+||||+|+|||||++|+++...
T Consensus 214 v~~s~~~L~e~~L~PF~~aI~ag~-~sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~-- 290 (535)
T 3sql_A 214 ISHDDTRLNTVELPPFKAAIQGGV-DAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF-- 290 (535)
T ss_dssp CCCCHHHHHHTTSHHHHHHHHTTC-SEEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT--
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCC-CEEEecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc--
Confidence 346899999999999999999885 59999999887 48999999999999999999999999999999998753
Q ss_pred ccCCHHHHHHHHHHcCCCccCcc----hhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCcCCCcc
Q 004054 311 YAKSPEDAVVDVLKAGMDVNCGS----FLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADV 386 (776)
Q Consensus 311 ~~~~~~ea~~~al~AG~D~~~~~----~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~ 386 (776)
.+..|++++|++||+||+|.+ ...+.|.+||++|+|+++|||+||+|||++|+++|+|+. +. ... ...
T Consensus 291 --~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~~-~~----~~~-~~~ 362 (535)
T 3sql_A 291 --AAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTATP-ST----FPQ-GIS 362 (535)
T ss_dssp --SCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSCC-CC----TTT-TCC
T ss_pred --CCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCC-Cc----cch-hhc
Confidence 367899999999999998642 356889999999999999999999999999999999983 31 221 236
Q ss_pred cCCHHHHHHHHHHHhhhhhhhccCCCCCCCC----CCCCCeEEEEccCCccccccCCccCCCCCccCCHHHHHHhhhcCe
Q 004054 387 VCSPAHQVLALQAAQDGIVLLKNSHGLLPLP----KSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENT 462 (776)
Q Consensus 387 i~~~~~~~la~~~A~esiVLLKN~~~~LPL~----~~~~~kIaviGp~a~~~~~~~G~~~g~~~~~~t~~~~l~~~~~~~ 462 (776)
+++++|+++++++|+||||| +++|||+ +.+.++|+|||++++... |+|.++..++| ++..-++
T Consensus 363 ~~~~eh~~lA~e~A~eSiVL----~~~LPL~~~~~~~~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~~ 429 (535)
T 3sql_A 363 GDRPETRKTVAMVLERATKH----QKSLVKISSFPDNFARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYAA 429 (535)
T ss_dssp TTCHHHHHHHHHHHHHHCEE----CSSCCCCCCCSTTSEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEEE
T ss_pred cCCHHHHHHHHHHHHhCeEE----CCcCCCCcccccCCCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCceE
Confidence 78999999999999999999 3699998 334689999999997642 55555554455 2222224
Q ss_pred eeecCCCCCCCCcccHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHHhcCCCEEEEEeCCCcc
Q 004054 463 VYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPV 542 (776)
Q Consensus 463 ~~~~g~~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~~~~~pvIvVl~~g~P~ 542 (776)
.+...+... .. ......-.+=+|+-.++...+. . |+ .+.++++.+. +.=--+|+. |+||
T Consensus 430 ~~~~~~~~~-~~--------~~~~~~~~~q~f~r~~~f~~~~-------~-~~--~~~~~~l~~~-~~~~~~~~y-g~py 488 (535)
T 3sql_A 430 EIVELKTLP-RL--------QLEAIPTLIQCFLRGNPFTEKL-------A-DP--IDVLQKIAAQ-IPLQGVIFY-GSPY 488 (535)
T ss_dssp EEEETTTGG-GB--------CCCSSCEEEEEEECCCSSCSSC-------C-CC--HHHHHHHHHH-SCEEEEEEE-ECCT
T ss_pred EEEcCcccc-cc--------ccCCCCeEEEEeecCCCCCCCc-------c-hH--HHHHHHHHhc-CceeEEEEe-CChh
Confidence 444332210 00 0011223333455333322221 1 33 5678888877 443445555 8999
Q ss_pred ccccccccCCcceEEeccCCCc--hhHHHHHHHHhCC
Q 004054 543 DITFAKYDRNIGSILWAGYPGE--AGAVALAEVIFGD 577 (776)
Q Consensus 543 ~l~~~~~~~~v~AiL~a~~~G~--e~g~AlAdVL~G~ 577 (776)
.+.|+. +..+.|-|+|.+|| ++..-+...||+.
T Consensus 489 ~~~~~~--~~~~~~p~~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 489 FLEALQ--TTLPEIPWWFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp THHHHH--HHCTTSCEEEESCCSHHHHHHHHHHTCSS
T ss_pred HHHHHH--HHhhcCCcccCCccCHHHHHHHHHHHhcc
Confidence 998775 22335556778887 5566666777774
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=3.5e-59 Score=506.09 Aligned_cols=252 Identities=18% Similarity=0.237 Sum_probs=213.6
Q ss_pred CCCCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCCHHHHHHHHHHHHHHHHHhhhcccccccee-ecc
Q 004054 81 RLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTF-WAP 159 (776)
Q Consensus 81 rlgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d~~l~~~~g~~~g~E~ra~~~~g~~~Gi~~-~aP 159 (776)
++|||.+ +..|++||.... ..++|.||+++++|||||++|++++|+++|+|+|++ |||+ |+|
T Consensus 70 ~~~iPll-i~~D~egG~v~r---------~~~~t~~P~~~~laat~d~~l~~~~g~~~a~E~ra~-------Gi~~~~aP 132 (351)
T 3tev_A 70 VMGEHAL-IAIDHEGGAITR---------PEFWPFAPSAMSLGAADDQQLTEDVNAALARQLRSV-------GINWNFTP 132 (351)
T ss_dssp HHCTTCE-EEECC----------------------CCCHHHHHHHCCHHHHHHHHHHHHHHHHHH-------TCCEECCC
T ss_pred HhCCCCc-eeEeCCCCeEeC---------CCCCCCCCCHHHHHhcCCHHHHHHHHHHHHHHHHHc-------CCCEeccc
Confidence 4688987 577888876321 235789999999999999999999999999999999 9999 999
Q ss_pred ccccCCCCCCCcc-ccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceeeEeeccccccCCCC---CCCCcceeecc
Q 004054 160 NINIFRDPRWGRG-QETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDN---WKGTTRYKFDA 235 (776)
Q Consensus 160 ~vdi~r~p~~gr~-~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~~~~~~~~v~a~~KHFpg~g~~~---~~~~~~~~~~~ 235 (776)
++||.|||+|||. .|+|||||+++++|+.|||+|+|+.| |++|+|||||||... |.+.+ .+
T Consensus 133 v~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~g-----------V~a~~KHFpG~g~~~~dsh~~~~----~~ 197 (351)
T 3tev_A 133 VLDINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTREG-----------VAPCAKHFPGHGDTHQDSHLALP----RV 197 (351)
T ss_dssp BCCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTTT-----------CEECEEEETCCTTCBCSSTTSCC----EE
T ss_pred eeEeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHcC-----------CeEEeeeccCCCCCcCCCCcCCC----cC
Confidence 9999999999986 57999999999999999999999998 999999999999643 33332 34
Q ss_pred ccCHHHHHhccCchHHHHHHcCCccEEEee---ccccCC-cccccCHHHHHHHHHhhcCCCeEEEcCchhHHhhhcCccc
Q 004054 236 RVTMQDLADTYQPPFESCVKQGRASGIMCA---YNRVNG-IPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGY 311 (776)
Q Consensus 236 ~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng-~pa~~s~~ll~~iLR~e~gf~G~VvSD~~~~~~~~~~~~~ 311 (776)
.+++++|+|+||+||+++ ++|.. +|||| ||.+|| .|||+|+++|++|||+||||+|+|||||++|+++...
T Consensus 198 ~~s~~~L~e~~l~PF~~a-~ag~~-~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~--- 272 (351)
T 3tev_A 198 SKSRAELDAGELAPFRAL-LPETP-AIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDAN--- 272 (351)
T ss_dssp CCCHHHHHHTTTHHHHHH-GGGCS-EEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHH---
T ss_pred CCCHHHHHHhhhHHHHHH-hcCCC-EEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhc---
Confidence 579999999999999999 77755 99999 888998 7999999999999999999999999999999988753
Q ss_pred cCCHHHHHHHHHHcCCCccCcc-------hhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccCCCC
Q 004054 312 AKSPEDAVVDVLKAGMDVNCGS-------FLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNP 374 (776)
Q Consensus 312 ~~~~~ea~~~al~AG~D~~~~~-------~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~Glf~~~p 374 (776)
.+..+++++|++||+||+|.+ .+.+.|.++|++ ++++||+||+|||++|+++|+|+ +|
T Consensus 273 -~~~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~-~P 337 (351)
T 3tev_A 273 -YGRGEAAVRALRAGADLVMALGRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQA-DE 337 (351)
T ss_dssp -SCHHHHHHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC---
T ss_pred -CCHHHHHHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCC-CC
Confidence 246799999999999999853 135678899988 99999999999999999999999 65
No 9
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=3.2e-52 Score=450.51 Aligned_cols=251 Identities=19% Similarity=0.201 Sum_probs=204.4
Q ss_pred CCCCCCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCCH------HHHHHHHHHHHHHHHHhhhccccc
Q 004054 79 IPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDS------YLWYRIGQAIGLEARALYNAGQAI 152 (776)
Q Consensus 79 ~~rlgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d~------~l~~~~g~~~g~E~ra~~~~g~~~ 152 (776)
+.+++||.+ +..|.++|... ++. -.++|.||+++++|||||+ ++++++|+++|+|+|++
T Consensus 59 i~~~~iPll-i~vD~EgG~v~-----r~~--~~g~t~fP~~~~laat~d~d~~~~~~la~~~g~~~a~El~a~------- 123 (348)
T 4g6c_A 59 IRAVREDIL-IAVDHEGGRVQ-----RFR--TDGFTVLPAMRRLGELWDRDVLLATKVATAVGYILAAELRAC------- 123 (348)
T ss_dssp HHHHCTTCE-EEECEEETTEE-----SCC--STTCCCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred HHHhCCCce-EEecCCCCcee-----cCC--CCCCCCCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHc-------
Confidence 445678876 57777777431 221 0368999999999999997 79999999999999999
Q ss_pred ccee-eccccccCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceeeEeeccccccCCCCCCCCcce
Q 004054 153 GMTF-WAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRY 231 (776)
Q Consensus 153 Gi~~-~aP~vdi~r~p~~gr~~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~~~~~~~~v~a~~KHFpg~g~~~~~~~~~~ 231 (776)
|||+ |+|++||..++.+.++.|+|||||+++++|+.|||+|+|+.| |++|+|||||||.+..+.+...
T Consensus 124 Gi~~~~aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~~G-----------V~a~~KHFpG~G~~~~dsh~~~ 192 (348)
T 4g6c_A 124 GIDMSFTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLAG-----------MANCGKHFPGHGFAEADSHVAL 192 (348)
T ss_dssp TCCEECCCBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHHTT-----------CCCCEEEETCSSSCCC----CC
T ss_pred CCCEeecCccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHhcC-----------CceeeCCCCCCCCccCCCCCCC
Confidence 9999 999999985544446789999999999999999999999998 9999999999996543322111
Q ss_pred eeccccCHHHHHhccCchHHHHHHcCCccEEEee---ccccCCcccccCHHHHHHHHHhhcCCCeEEEcCchhHHhhhcC
Q 004054 232 KFDARVTMQDLADTYQPPFESCVKQGRASGIMCA---YNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDA 308 (776)
Q Consensus 232 ~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~iLR~e~gf~G~VvSD~~~~~~~~~~ 308 (776)
.. ...+.++|++.||+||+++ ++|.. +||+| ||++||+|||+|+++|+++||+||||+|+|||||++|.++.
T Consensus 193 ~v-~~~~~~el~~~~l~PF~~a-~ag~~-~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~-- 267 (348)
T 4g6c_A 193 PT-DDRTLDAILEQDVAPYDWL-GLSLA-AVIPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAAR-- 267 (348)
T ss_dssp CE-ECCCHHHHHHTTSHHHHHH-GGGCC-EEEECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGG--
T ss_pred Cc-CCCCHHHHHHHHHHHHHHH-hcCCC-eEEecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhh--
Confidence 11 2346788888999999999 87754 99999 99999999999999999999999999999999999998764
Q ss_pred ccccCCHHHHHHHHHHcCCCccCcch---hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 004054 309 EGYAKSPEDAVVDVLKAGMDVNCGSF---LQKHTKAAVKQKKLPESEIDRALHNLFSVRMRL 367 (776)
Q Consensus 309 ~~~~~~~~ea~~~al~AG~D~~~~~~---~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~ 367 (776)
...+..|++++|++||+||+|.+. ....+.++++ .+.++++++||++++.|.
T Consensus 268 --~~~~~~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~-----~~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 268 --EGGTLTQAADAALAAGCDMVLVCNQPDAAEVVLNGLK-----ARASAESVRRIKRMRARG 322 (348)
T ss_dssp --TTCCHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHCC-----C--CHHHHHHHHTTSCCS
T ss_pred --hcCCHHHHHHHHHHcCCCEECCCCChHHHHHHHHHhh-----cccchHHHHHHHHHHhcc
Confidence 356788999999999999998643 3455666664 357899999999987764
No 10
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=3.7e-52 Score=449.67 Aligned_cols=249 Identities=17% Similarity=0.151 Sum_probs=207.3
Q ss_pred CCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCCH----HHHHHHHHHHHHHHHHhhhcccccccee-e
Q 004054 83 GIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDS----YLWYRIGQAIGLEARALYNAGQAIGMTF-W 157 (776)
Q Consensus 83 gip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d~----~l~~~~g~~~g~E~ra~~~~g~~~Gi~~-~ 157 (776)
+||.+ +..|.++|... +...++|.||+++++|||||+ +|++++|+++|+|+|++ |||+ |
T Consensus 54 ~iPll-i~vD~egG~v~--------r~~~g~t~fP~~~~lgat~d~~~~~~la~~~g~~~a~Elra~-------Gin~~f 117 (349)
T 4gvf_A 54 RNHLV-VAVDQEGGRVQ--------RFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAM-------DIDISF 117 (349)
T ss_dssp SSCCE-EEECEEETTEE--------SCCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------TCCEEC
T ss_pred CCCce-eeecCCCceee--------ccCCCCCCCccHHHHHHhcCcchHHHHHHHHHHHHHHHHHHc-------CCCEEe
Confidence 68877 57777777532 122468999999999999999 89999999999999999 9999 9
Q ss_pred ccccccCC-CCCCCccccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceeeEeeccccccCCCCCCCCcceeeccc
Q 004054 158 APNINIFR-DPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDAR 236 (776)
Q Consensus 158 aP~vdi~r-~p~~gr~~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~~~~~~~~v~a~~KHFpg~g~~~~~~~~~~~~~~~ 236 (776)
+|++||.| +|.| ++|+|||||+++++|+.|||+|||+.| |++|+|||||||.+..+.+.... ...
T Consensus 118 aPv~Dv~r~~~~i--g~rsfgeDP~lv~~~a~a~v~Glq~~G-----------V~a~~KHFpG~G~~~~dsh~~~~-v~~ 183 (349)
T 4gvf_A 118 APVLDVGHISAAI--GERSYHADPAKALAMATRFIDGMHDAG-----------MKTTGKHFPGHGAVTADSHKETP-CDP 183 (349)
T ss_dssp CCBCCCCSCCTTT--GGGSSCSSHHHHHHHHHHHHHHHHHHT-----------CCCEEEEETCCTTCCCCSSSSCC-BCC
T ss_pred cCcccCCCCCCCC--cCcCCCCCHHHHHHHHHHHHHHHHHcC-----------ceeeecccccCCCcccCCCCCCC-CCC
Confidence 99999998 4555 589999999999999999999999998 99999999999966433222111 123
Q ss_pred cCHHHHHhccCchHHHHHHcCCccEEEee---ccccCCcccccCHHHHHHHHHhhcCCCeEEEcCchhHHhhhcCccccC
Q 004054 237 VTMQDLADTYQPPFESCVKQGRASGIMCA---YNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAK 313 (776)
Q Consensus 237 ~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~iLR~e~gf~G~VvSD~~~~~~~~~~~~~~~ 313 (776)
.+.++|++.||+||+++|++|.+.+|||| ||+||+.|||+|+++|++|||+||||+|+|||||++|.++. ...
T Consensus 184 ~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~ 259 (349)
T 4gvf_A 184 RPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA----IMG 259 (349)
T ss_dssp CCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG----GGC
T ss_pred cCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc----ccC
Confidence 57899999999999999999966699999 99999999999999999999999999999999999997643 356
Q ss_pred CHHHHHHHHHHcCCCccCcch---hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 004054 314 SPEDAVVDVLKAGMDVNCGSF---LQKHTKAAVKQKKLPESEIDRALHNLFSVRMRL 367 (776)
Q Consensus 314 ~~~ea~~~al~AG~D~~~~~~---~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~ 367 (776)
+..|++++|++||+||+|.+. ....+.+++.. ++++|+++++.|++.-.+.+
T Consensus 260 ~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~al~~--~~~~r~~~~~~r~~~~~~~l 314 (349)
T 4gvf_A 260 SYAERAQASLDAGCDMILVCNNRKGAVSVLDNLSP--IKAERVTRLYHKGSFSRREL 314 (349)
T ss_dssp CHHHHHHHHHHHTCSEEEECSCHHHHHHHHHHSCC--CCCGGGGGGCCCCCCCHHHH
T ss_pred CHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHhhh--ccHHHHHHHhhcCCCCHHHH
Confidence 788999999999999998643 33456667754 78888888887765444443
No 11
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=6.5e-52 Score=447.32 Aligned_cols=247 Identities=17% Similarity=0.127 Sum_probs=207.0
Q ss_pred CCCCchhhhhhcccceeccCCcccccCccCCccccchhhhhhhcCC--HHHHHHHHHHHHHHHHHhhhcccccccee-ec
Q 004054 82 LGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFD--SYLWYRIGQAIGLEARALYNAGQAIGMTF-WA 158 (776)
Q Consensus 82 lgip~~~~~~d~~~g~~~~~~g~~~~~~~~~~t~fP~~~~lgAt~d--~~l~~~~g~~~g~E~ra~~~~g~~~Gi~~-~a 158 (776)
.+||.+ +..|.++|... +...++|.||+++++|| || ++|++++|+++|+|+|++ |||+ |+
T Consensus 53 ~~iPll-i~~D~egG~v~--------r~~~~~t~fP~~~~laa-~d~~~~la~~~g~~~a~E~ra~-------Gi~~~~a 115 (340)
T 2oxn_A 53 AKRPIL-IGVDQEGGRVQ--------RFREGFSRIPPAQYYAR-AENGVELAEQGGWLMAAELIAH-------DVDLSFA 115 (340)
T ss_dssp HSSCCE-EEECEEETTEE--------SCCTTSCCCCCGGGGGG-STTHHHHHHHHHHHHHHHHHTT-------TCCEECC
T ss_pred cCCCeE-eeecCCCeeEe--------ccCCCCCCCCCHHHHhC-CCcHHHHHHHHHHHHHHHHHHh-------CCCEEec
Confidence 368877 57777776431 12236899999999999 99 999999999999999999 9999 99
Q ss_pred cccccCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceeeEeeccccccCCCCCCCCcceeeccccC
Q 004054 159 PNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVT 238 (776)
Q Consensus 159 P~vdi~r~p~~gr~~esfgeDp~l~~~~a~a~v~GlQ~~g~~~~~~~~~~~v~a~~KHFpg~g~~~~~~~~~~~~~~~~~ 238 (776)
|++||.|+ +|.|+.|+|||||+++++|+.|+|+|||+.| |++|+|||||||.+..+.+-... ..+
T Consensus 116 Pv~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~g-----------V~a~~KHFpG~G~~~~dsh~~~~---v~~ 180 (340)
T 2oxn_A 116 PVLDMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMKAVG-----------MATTGKHFPGHGAVIADSHLETP---YDE 180 (340)
T ss_dssp CBCCCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHHHTT-----------CCCEEEEETCCTTCCSCCSSSSC---BCC
T ss_pred CccCCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHHHCC-----------ceeeeccCcCCCCccCCCCCCCc---cCC
Confidence 99999999 8889999999999999999999999999998 99999999999976533221111 122
Q ss_pred HHHHHhccCchHHHHHHcCCccEEEee---ccccCCcccccCHHHHHHHHHhhcCCCeEEEcCchhHHhhhcCccccCCH
Q 004054 239 MQDLADTYQPPFESCVKQGRASGIMCA---YNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSP 315 (776)
Q Consensus 239 ~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~iLR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~ 315 (776)
.++| |.||+||+++|++|.+.+|||| ||++|++|||+|+++|+++||+||||+|+|||||++|.++.. ..+.
T Consensus 181 ~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~~~ 255 (340)
T 2oxn_A 181 RETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV----MGGP 255 (340)
T ss_dssp CSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH----HCSH
T ss_pred HHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhc----cCCH
Confidence 3889 9999999999999955699999 999999999999999999999999999999999999976542 3577
Q ss_pred HHHHHHHHHcCCCccCcc---hhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 004054 316 EDAVVDVLKAGMDVNCGS---FLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRL 367 (776)
Q Consensus 316 ~ea~~~al~AG~D~~~~~---~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~ 367 (776)
.+++++|++||+||+|.+ .....+.++++ .++++|+++++.|+....+++
T Consensus 256 ~ea~~~Al~AG~Dm~l~~~~~~~~~~~~~av~--~~~~~Rl~~~~~~~~~~~~~l 308 (340)
T 2oxn_A 256 VERSHQALVAGCDMILICNKREAAVEVLDNLP--IMEVPQAEALLKKQQFSYSEL 308 (340)
T ss_dssp HHHHHHHHHHTCSEEECCSCHHHHHHHHHHSC--CCCCGGGGGGSCSCCCCHHHH
T ss_pred HHHHHHHHHcCCCEEcCCCCHHHHHHHHHHHH--HhhHHHHHHHhhcccccHHHH
Confidence 899999999999999864 23457777773 489999999887765433333
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.94 E-value=0.0026 Score=58.43 Aligned_cols=51 Identities=24% Similarity=0.328 Sum_probs=41.7
Q ss_pred ceEEEEEEEEecCCCC-CCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMA-GKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~-G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 741 (776)
+.++++|+|+|.|..+ +.--|.||+.. ++.+-+-+.|+||++++|+|.+.+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyvng----------~~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYING----------TLYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEETT----------EEEEEEEEEECTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEECC----------EEEeeEEeccCCCCeEEEEEEEEc
Confidence 6799999999999875 66789999943 234444568999999999999987
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.32 E-value=0.013 Score=52.72 Aligned_cols=62 Identities=21% Similarity=0.236 Sum_probs=49.5
Q ss_pred ceEEEEEEEEecCCC-CCCceEEEEeecCCCCCCCCcccccceeeE-EeCCCCEEEEEEEecCCCCceEEcCCCcEEEeC
Q 004054 681 RKFLVTIGVKNHGEM-AGKHPVLLFVKPARRGNGRPIKQLVGFQSV-ILNAKEKAEIVFELSPCESLSRAREDGLMVIEE 758 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~-~G~evvQlY~~~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~ 758 (776)
+.++++++|+|.|.. ++.-.|-+|+.. .+.+.+.| .|++|++++|+|++.+.. ++
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly~~g----------~~v~t~~v~~LaaG~s~tv~~~w~~~~-------------~~ 75 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLLVDG----------IVVDTQTVTSLESENSTNVDFHWTLDG-------------TA 75 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEETT----------EEEEEEEESCBCBTCEEEEEEEEECCC-------------SC
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEEECC----------EEEcceecccccCCCEEEEEEEEeecC-------------cC
Confidence 679999999999986 577789999854 35677778 599999999999888631 36
Q ss_pred cEEEEEE
Q 004054 759 GTHFLVV 765 (776)
Q Consensus 759 G~y~i~v 765 (776)
|.|+|.+
T Consensus 76 G~ytl~a 82 (114)
T 2l0d_A 76 NSYTLTV 82 (114)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 7888776
No 14
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=95.79 E-value=0.0076 Score=54.75 Aligned_cols=55 Identities=16% Similarity=0.270 Sum_probs=41.3
Q ss_pred ceEEEEEEEEecCCC-CCCceEEEEeecCCCCCCCCcccccceeeE-EeCCCCEEEEEEEec
Q 004054 681 RKFLVTIGVKNHGEM-AGKHPVLLFVKPARRGNGRPIKQLVGFQSV-ILNAKEKAEIVFELS 740 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~-~G~evvQlY~~~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~ 740 (776)
+.++++++|+|.|.. ++.--|.+|+..|.... .+.|-..| .|+||++.+++|++.
T Consensus 16 ~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg-----~~vgt~tv~~LaaG~s~t~~v~~~ 72 (122)
T 2kut_A 16 EEITVSARVTNRGAAEAHNVPVAVYLGNPAQGG-----VEIGRDTISRIPVGGTGLARVQWK 72 (122)
T ss_dssp CEEEEEEEEECCSSSCBCCCCEEECSSCTTTCC-----CCCBCCCCSCBCTTCEEECCEEEE
T ss_pred CeEEEEEEEEeCCCcccCcEEEEEEeCCCccCC-----eEEeeEEccccCCCCeEEEEEEEe
Confidence 689999999999987 56778999999875322 23444446 499999999555544
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=94.28 E-value=0.24 Score=44.73 Aligned_cols=69 Identities=25% Similarity=0.289 Sum_probs=49.3
Q ss_pred ceEEEEEEEEecCCCC-------CCceEEEEeecCCC------CCCCCcccccceeeEEeCCCCEEEEEEEecCCCCceE
Q 004054 681 RKFLVTIGVKNHGEMA-------GKHPVLLFVKPARR------GNGRPIKQLVGFQSVILNAKEKAEIVFELSPCESLSR 747 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~-------G~evvQlY~~~~~~------~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~ 747 (776)
+.+.+.++|+|.|+.+ |. -..+.|.+..+ |..+---+ +++...|+|||+.+.+++++.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq-~~Df~v~d~~G~~VwrwS~~~~FtQ--a~~~~tl~pGE~~~f~~~w~~------ 88 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQ-KFELVVYDSEHKERYRYSKEKMFTQ--AFQNLTLESGETYDFSDVWKE------ 88 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSC-CEEEEEECTTCCEEEETTTTCCCCC--CCEEEEECTTCEEEEEEEESS------
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCC-EEEEEEECCCCCEEEEccccchhhh--hhceEEECCCCEEEEEEEeCC------
Confidence 5799999999999854 32 23556655443 22233323 677889999999999999982
Q ss_pred EcCCCcEEEeCcEEEEEE
Q 004054 748 AREDGLMVIEEGTHFLVV 765 (776)
Q Consensus 748 ~d~~~~~~~e~G~y~i~v 765 (776)
.++||.|++.+
T Consensus 89 -------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 -------VPEPGTYEVKV 99 (120)
T ss_dssp -------CCCSEEEEEEE
T ss_pred -------CCCCccEEEEE
Confidence 35799999865
No 16
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=90.72 E-value=0.47 Score=50.89 Aligned_cols=64 Identities=19% Similarity=0.181 Sum_probs=38.8
Q ss_pred ceEEEEEEEEecCCCC------------CCceEEEEeec---CCCC--CCCCcccccceeeEEeCCCCEEEEEEEecCCC
Q 004054 681 RKFLVTIGVKNHGEMA------------GKHPVLLFVKP---ARRG--NGRPIKQLVGFQSVILNAKEKAEIVFELSPCE 743 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~------------G~evvQlY~~~---~~~~--~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~ 743 (776)
+.+.|.++|||+|+.+ =.+.++++-.. +... +.+..-.+..| +.|+||||.+++|.|....
T Consensus 36 ~~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~y 113 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLY 113 (343)
T ss_dssp SCCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTB
T ss_pred CCeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhcc
Confidence 4578999999999854 11345554211 1111 11111134566 6799999999999997544
Q ss_pred Cce
Q 004054 744 SLS 746 (776)
Q Consensus 744 ~ls 746 (776)
+|+
T Consensus 114 dLs 116 (343)
T 2x3c_A 114 DMS 116 (343)
T ss_dssp TCC
T ss_pred ccC
Confidence 453
No 17
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=87.23 E-value=1.4 Score=37.88 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=33.0
Q ss_pred eEEEEEEEEecCCCCCCceEEEEeecC----CCCCCCCcccccce-------eeEEeCCCCEEEEEEE
Q 004054 682 KFLVTIGVKNHGEMAGKHPVLLFVKPA----RRGNGRPIKQLVGF-------QSVILNAKEKAEIVFE 738 (776)
Q Consensus 682 ~~~vsv~VtNtG~~~G~evvQlY~~~~----~~~~~~P~k~L~gF-------~kv~L~pGes~~V~~~ 738 (776)
.-+++++|+|||+|+ +|+=-+.. +.....-...=.|| .-|..+||++++|++.
T Consensus 19 r~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 19 RATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CCEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CCEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 346889999999997 77733221 11111222222333 4678999999999985
No 18
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.83 E-value=1.6 Score=39.20 Aligned_cols=76 Identities=16% Similarity=0.162 Sum_probs=48.1
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEecCCCCceEEcCCCcEEEeCc-
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELSPCESLSRAREDGLMVIEEG- 759 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G- 759 (776)
.+-+.++.|+|+|+.+++-..+ ...+.. + .|. +-.|+|||+.+|+++..+ .....|+..-.-.++.|
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~--~~~~F~-i-~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~~l~v~~~~g~ 108 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIK--TCRPFS-I-EPA-------IGTLNVGESMQLEVEFEP-QSVGDHSGRLIVCYDTGE 108 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEE--CCTTEE-E-ESS-------EEEECTTCEEEEEEEECC-SSSBCCCCBCEEEESSSC
T ss_pred CeEEEEEEEEECCCCCEEEEEe--cCCCeE-E-ECC-------cCEECCCCEEEEEEEEEc-CCCccEEEEEEEEECCCC
Confidence 4567899999999987763322 111111 1 122 256999999999999999 56777766555455554
Q ss_pred EEEEEEecC
Q 004054 760 THFLVVGDE 768 (776)
Q Consensus 760 ~y~i~vG~~ 768 (776)
.+.|.+=++
T Consensus 109 ~~~v~L~G~ 117 (122)
T 2ys4_A 109 KVFVSLYGA 117 (122)
T ss_dssp EECCEECCC
T ss_pred EEEEEEEEE
Confidence 344544333
No 19
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.34 E-value=2.4 Score=37.11 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=38.9
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEecCCCCceEEcCC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELSPCESLSRARED 751 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~ 751 (776)
...+.+++++|+|+.+..-- +....... ...--....+-.|+||++.+|++++.+ +....|+..
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~----~~~~~~~~--~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~~~ 89 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFN----MTPPTSAL--GACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFEEE 89 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEE----ECCCSSHH--HHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEEEE
T ss_pred CEEEEEEEEEECCcceEEEE----EecCCccc--cCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEEEE
Confidence 35778999999999754321 11111000 000011234557999999999999998 567777643
No 20
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=83.17 E-value=2.7 Score=37.55 Aligned_cols=54 Identities=15% Similarity=0.056 Sum_probs=33.6
Q ss_pred eEEEEEEEEecCCCCCCceEEEEeecCC----CCCCCCcccccce-------eeEEeCCCCEEEEEEEe
Q 004054 682 KFLVTIGVKNHGEMAGKHPVLLFVKPAR----RGNGRPIKQLVGF-------QSVILNAKEKAEIVFEL 739 (776)
Q Consensus 682 ~~~vsv~VtNtG~~~G~evvQlY~~~~~----~~~~~P~k~L~gF-------~kv~L~pGes~~V~~~l 739 (776)
.-+++++|+|||+|+ |||=-+... .....-...=.|| .-|..+||++++|++.=
T Consensus 25 r~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 25 REKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp SCEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CcEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 346899999999997 777433211 1122222222333 45789999999999853
No 21
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=83.17 E-value=2.7 Score=37.55 Aligned_cols=54 Identities=15% Similarity=0.056 Sum_probs=33.6
Q ss_pred eEEEEEEEEecCCCCCCceEEEEeecCC----CCCCCCcccccce-------eeEEeCCCCEEEEEEEe
Q 004054 682 KFLVTIGVKNHGEMAGKHPVLLFVKPAR----RGNGRPIKQLVGF-------QSVILNAKEKAEIVFEL 739 (776)
Q Consensus 682 ~~~vsv~VtNtG~~~G~evvQlY~~~~~----~~~~~P~k~L~gF-------~kv~L~pGes~~V~~~l 739 (776)
.-+++++|+|||+|+ |||=-+... .....-...=.|| .-|..+||++++|++.=
T Consensus 25 r~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 25 REKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp SCEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CcEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 346899999999997 777433211 1122222222333 45789999999999853
No 22
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=81.24 E-value=1.3 Score=40.14 Aligned_cols=56 Identities=18% Similarity=0.351 Sum_probs=35.0
Q ss_pred EEEEEEEecCCCC----CCceEEEEeecCCC------------CCCCC-cccccceeeEEeCCCCEEEEEEEec
Q 004054 684 LVTIGVKNHGEMA----GKHPVLLFVKPARR------------GNGRP-IKQLVGFQSVILNAKEKAEIVFELS 740 (776)
Q Consensus 684 ~vsv~VtNtG~~~----G~evvQlY~~~~~~------------~~~~P-~k~L~gF~kv~L~pGes~~V~~~l~ 740 (776)
+|+++++|+|..+ |.+.|-.=-.+... .-..| .....+-.++ |.|||+.+|+|+.+
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~-l~pGes~~vtf~~~ 100 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKL-IGSGEKDSVTFDVS 100 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCC-BCTTCEEEEEEEGG
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccce-eCCCcEEEEEEeCc
Confidence 5888999999998 99988772211110 00001 1112222333 89999999999987
No 23
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=80.59 E-value=2.3 Score=48.91 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=37.8
Q ss_pred ceEEEEEEEEecCC--CCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEecCC
Q 004054 681 RKFLVTIGVKNHGE--MAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELSPC 742 (776)
Q Consensus 681 ~~~~vsv~VtNtG~--~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~ 742 (776)
++.+|+++|+|.+. ++|.+++ ||+..... ..+ .-..++||++.++.|+|...
T Consensus 373 ~~~~~~~~vtn~~~~~~~~~~~~-~~~~~~~~--------~~~-~~~~~~~g~~~t~~~~vt~~ 426 (601)
T 1w8o_A 373 QQVTVPVAVTNQSGIAVPKPSLQ-LDASPDWQ--------VQG-SVEPLMPGRQAKGQVTITVP 426 (601)
T ss_dssp CEEEEEEEEECCSSSCBSSCEEE-EECCTTSE--------EEE-EECCBCTTCEEEEEEEEECC
T ss_pred ceeEEEEEEECCCceeccCceEE-EecCCCcE--------Eec-cccccCCCCceEEEEEEecC
Confidence 57899999999976 7887777 88733222 111 22568999999998888763
No 24
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=76.13 E-value=5.7 Score=36.13 Aligned_cols=66 Identities=21% Similarity=0.168 Sum_probs=35.4
Q ss_pred EEEEEEEecCCCC----CCceEEEEeecCCC--------C---CCCCcccccc-eeeEEeCCCCEEEEEEEec---CCCC
Q 004054 684 LVTIGVKNHGEMA----GKHPVLLFVKPARR--------G---NGRPIKQLVG-FQSVILNAKEKAEIVFELS---PCES 744 (776)
Q Consensus 684 ~vsv~VtNtG~~~----G~evvQlY~~~~~~--------~---~~~P~k~L~g-F~kv~L~pGes~~V~~~l~---~~~~ 744 (776)
+|+|+++|+|.++ +.++|-.=-..+.. . .--|...-.. +.-..|.|||+.+|+|+++ ..-.
T Consensus 28 ~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~ 107 (129)
T 1cuo_A 28 EFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEA 107 (129)
T ss_dssp EEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSC
T ss_pred EEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEEeccccCCCce
Confidence 4788899999987 77766432111000 0 0001000000 1112489999999999986 2134
Q ss_pred ceEEc
Q 004054 745 LSRAR 749 (776)
Q Consensus 745 ls~~d 749 (776)
..||-
T Consensus 108 Y~f~C 112 (129)
T 1cuo_A 108 YTYFC 112 (129)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 55554
No 25
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=75.37 E-value=6 Score=41.87 Aligned_cols=56 Identities=23% Similarity=0.424 Sum_probs=36.5
Q ss_pred ceEEEEEEEEecCCCCCCceEEE---------EeecCC--CCCCCCcccccceeeEE------eCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLL---------FVKPAR--RGNGRPIKQLVGFQSVI------LNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQl---------Y~~~~~--~~~~~P~k~L~gF~kv~------L~pGes~~V~~~l~~ 741 (776)
++++++++|||+|+ +.|+| |+.+.. .....| .+|.+.+.+. |+|||+++++++..-
T Consensus 264 R~l~~~~~VtN~g~----~pvrlgeF~tA~vrFln~~~~~~~~~~P-~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 264 RAMRMKLTITNHGN----SPIRLGEFYTASVRFLDSDVYKDTTGYP-EDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp SEEEEEEEEEECSS----SCEEEEEEECSSCEEECTTTCCCCSCCC-GGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred cEEEEEEEEEcCCC----CceEeeeEEeccEEEeCCcccccCCCCh-HHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 68999999999875 44555 333211 112234 4566444332 999999999998863
No 26
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=74.95 E-value=4.9 Score=36.53 Aligned_cols=64 Identities=17% Similarity=0.263 Sum_probs=36.4
Q ss_pred EEEEEEEecCCCC----CCceEEEEeecCC--------C----CC---CCCcccccceeeEEeCCCCEEEEEEEec---C
Q 004054 684 LVTIGVKNHGEMA----GKHPVLLFVKPAR--------R----GN---GRPIKQLVGFQSVILNAKEKAEIVFELS---P 741 (776)
Q Consensus 684 ~vsv~VtNtG~~~----G~evvQlY~~~~~--------~----~~---~~P~k~L~gF~kv~L~pGes~~V~~~l~---~ 741 (776)
+|+|+++|+|..+ +.++|-.=-.... . .- ..|. .| +..+ .|.|||+.+|+|+.+ +
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~-~~-~~t~-~l~pGet~svtf~~~~l~~ 104 (128)
T 1nwp_A 28 TFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDAR-VI-AHTK-VIGAGEKDSVTFDVSKLAA 104 (128)
T ss_dssp EEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTT-EE-EECC-CBCTTCEEEEEEEGGGSCT
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccch-hh-eeee-eeCCCCEEEEEEeccccCC
Confidence 4788999999987 7776643110000 0 00 0010 11 1112 489999999999985 3
Q ss_pred CCCceEEcC
Q 004054 742 CESLSRARE 750 (776)
Q Consensus 742 ~~~ls~~d~ 750 (776)
..+..||-.
T Consensus 105 G~~Y~f~C~ 113 (128)
T 1nwp_A 105 GEKYGFFCS 113 (128)
T ss_dssp TSCEEEECC
T ss_pred CceEEEEEC
Confidence 234777754
No 27
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=73.74 E-value=5.6 Score=36.12 Aligned_cols=64 Identities=19% Similarity=0.293 Sum_probs=36.2
Q ss_pred EEEEEEEecCCCC----CCceEEEE-----------eec-CCCCC---CCCcccccceeeEEeCCCCEEEEEEEec---C
Q 004054 684 LVTIGVKNHGEMA----GKHPVLLF-----------VKP-ARRGN---GRPIKQLVGFQSVILNAKEKAEIVFELS---P 741 (776)
Q Consensus 684 ~vsv~VtNtG~~~----G~evvQlY-----------~~~-~~~~~---~~P~k~L~gF~kv~L~pGes~~V~~~l~---~ 741 (776)
+|+|+++|+|..+ +.++|-.= +.. +...- ..|. .| +.-..|.||||.+|+|+++ +
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~-~~--~~t~~l~pGes~~vtf~~~~l~~ 103 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDER-VI--AHTSVIGGGETDSVTFDVSKLKE 103 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTT-EE--EECCCBCTTCEEEEEEESSCCCT
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccch-hh--ccceeeCCCCEEEEEEeccccCC
Confidence 4788999999987 78866431 000 00000 0011 11 1112489999999999985 3
Q ss_pred CCCceEEcC
Q 004054 742 CESLSRARE 750 (776)
Q Consensus 742 ~~~ls~~d~ 750 (776)
..+..||..
T Consensus 104 G~~Y~f~C~ 112 (128)
T 2iaa_C 104 GEDYAFFCS 112 (128)
T ss_dssp TCCEEEECC
T ss_pred CceEEEEEC
Confidence 224667654
No 28
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=73.54 E-value=5.4 Score=36.25 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=18.4
Q ss_pred EeCCCCEEEEEEEec---CCCCceEEcC
Q 004054 726 ILNAKEKAEIVFELS---PCESLSRARE 750 (776)
Q Consensus 726 ~L~pGes~~V~~~l~---~~~~ls~~d~ 750 (776)
.|.|||+.+|+|+.+ +..+..||-.
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~ 113 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCS 113 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeC
Confidence 489999999999986 2123666654
No 29
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=67.97 E-value=3.6 Score=39.24 Aligned_cols=24 Identities=8% Similarity=0.194 Sum_probs=17.8
Q ss_pred EeCCCCEEEEEEEec---CCCCceEEcC
Q 004054 726 ILNAKEKAEIVFELS---PCESLSRARE 750 (776)
Q Consensus 726 ~L~pGes~~V~~~l~---~~~~ls~~d~ 750 (776)
.|.|||+.+|+|+++ + -.+.||..
T Consensus 125 ~l~pGet~svtf~~~~lkp-G~Y~f~Ct 151 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLAD-GDYKFACT 151 (167)
T ss_dssp CBCTTCEEEEEECGGGGTT-SCEEEECC
T ss_pred eeCCCCEEEEEEecCCCCC-cEEEEEcC
Confidence 489999999999975 3 34556553
No 30
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=66.28 E-value=9.5 Score=37.39 Aligned_cols=53 Identities=11% Similarity=0.007 Sum_probs=32.5
Q ss_pred EEEEEEEEecCCCCCCceEEEEeecCCC----CCCCCcccccce-------eeEEeCCCCEEEEEEEe
Q 004054 683 FLVTIGVKNHGEMAGKHPVLLFVKPARR----GNGRPIKQLVGF-------QSVILNAKEKAEIVFEL 739 (776)
Q Consensus 683 ~~vsv~VtNtG~~~G~evvQlY~~~~~~----~~~~P~k~L~gF-------~kv~L~pGes~~V~~~l 739 (776)
-+++++|+|||+|+ ||+=-+.... ....-...=.|| .-|..+||++++|++.=
T Consensus 125 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 188 (225)
T 3qga_A 125 EITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLIP 188 (225)
T ss_dssp CCEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred ceEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEEE
Confidence 35889999999997 6763332111 111122222233 45789999999999853
No 31
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=64.82 E-value=7.2 Score=39.03 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=32.0
Q ss_pred EEecCCCCCCceEEEEeecCCCCCC-CC--------cccccceeeEEeCCCCEEEEEEEecC
Q 004054 689 VKNHGEMAGKHPVLLFVKPARRGNG-RP--------IKQLVGFQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 689 VtNtG~~~G~evvQlY~~~~~~~~~-~P--------~k~L~gF~kv~L~pGes~~V~~~l~~ 741 (776)
+-|-|. |.=+|+||.+++..... .| .+.+..+.+|.|.||||-| |.+
T Consensus 131 iinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT----l~P 186 (246)
T 3kmh_A 131 IINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC----LPP 186 (246)
T ss_dssp EEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE----ECT
T ss_pred EEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe----cCC
Confidence 455543 56677888887664321 11 3677888999999999866 666
No 32
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=64.13 E-value=9 Score=37.87 Aligned_cols=52 Identities=19% Similarity=0.110 Sum_probs=32.9
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCC----CCCCCCcccccce-------eeEEeCCCCEEEEEEEe
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPAR----RGNGRPIKQLVGF-------QSVILNAKEKAEIVFEL 739 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~----~~~~~P~k~L~gF-------~kv~L~pGes~~V~~~l 739 (776)
+++++|+|||+|+ ||+=-+... .....-...=.|| .-|..+||++++|++.=
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5889999999997 777433211 1122222222333 45789999999999854
No 33
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=59.66 E-value=7 Score=47.53 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=38.0
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeec--CCC-CC-CCCcccccc--eeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKP--ARR-GN-GRPIKQLVG--FQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~--~~~-~~-~~P~k~L~g--F~kv~L~pGes~~V~~~l~~ 741 (776)
+.++++++|+|+|+.+...+.++-+.. +.. .+ ..|. .|.- -+++.|+|||+++++++++.
T Consensus 499 ~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 499 DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 468899999999986644433333321 211 11 1243 2322 25678999999999999986
No 34
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=58.57 E-value=23 Score=32.39 Aligned_cols=56 Identities=11% Similarity=0.066 Sum_probs=33.4
Q ss_pred eEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccce-eeEEeCCCCEEEEEEEecC
Q 004054 682 KFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGF-QSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 682 ~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~ 741 (776)
..+-+++|+|||.++..--.+ ..+......+ ..|.=. .+-.|.|||+.+|+|++..
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~---~~~~~~~~~~-~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFI---PKLNDSQYCK-PWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEE---CCTTCSSSSC-TTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccceEEEEe---cCCCchhhhh-HhhhcCCcccccCCCCeeEEEEEEEE
Confidence 457799999999987653332 1111111100 011111 2346999999999999986
No 35
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=57.35 E-value=14 Score=39.56 Aligned_cols=55 Identities=24% Similarity=0.367 Sum_probs=33.4
Q ss_pred ceEEEEEEEEecCCCCCCceEEE--Ee----ecCCCCC-----CCCccccc---c--eeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLL--FV----KPARRGN-----GRPIKQLV---G--FQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQl--Y~----~~~~~~~-----~~P~k~L~---g--F~kv~L~pGes~~V~~~l~~ 741 (776)
++++++++|||+|+-+ ||| |. ++.+.++ ..| ++|. | =.. -|+|||++++++++.-
T Consensus 298 R~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p-~~l~a~~GL~s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 298 RELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFP-DYLLADRGLSNDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp SEEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCC-TTTEESCCCCCCC-CBCTTCEEEEEEEEEC
T ss_pred cEEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCc-hhhhhccCCCCCC-CcCCCcceEEEEEeeh
Confidence 6899999999997643 444 11 1111111 112 2332 2 333 5999999999999864
No 36
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=53.49 E-value=15 Score=33.31 Aligned_cols=16 Identities=25% Similarity=0.449 Sum_probs=13.7
Q ss_pred EEeCCCCEEEEEEEec
Q 004054 725 VILNAKEKAEIVFELS 740 (776)
Q Consensus 725 v~L~pGes~~V~~~l~ 740 (776)
..|.|||+.+++|+.+
T Consensus 99 ~~l~pGet~~v~f~~~ 114 (139)
T 2aan_A 99 PLANGNETVEVTFTAP 114 (139)
T ss_dssp CCBCTTCEEEEEEECC
T ss_pred cccCCCCEEEEEEECC
Confidence 4589999999999875
No 37
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=46.67 E-value=52 Score=32.54 Aligned_cols=52 Identities=19% Similarity=0.193 Sum_probs=34.9
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceee-EEeCCCCEEEEEEEec
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQS-VILNAKEKAEIVFELS 740 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~k-v~L~pGes~~V~~~l~ 740 (776)
.++++|+|+|+. --.||..+.+.......|. .--== ..|+||+++.|.|...
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pf---ivtPPl~rl~p~~~q~lRI~~~ 81 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAPF---LVMPPLFRLEANQQSQLRIVRT 81 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCSE---EEESSEEEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCCE---EEeCCEEEECCCCceEEEEEEC
Confidence 478899999975 6799999986443222121 11111 2599999999999654
No 38
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=46.14 E-value=38 Score=34.22 Aligned_cols=62 Identities=15% Similarity=0.063 Sum_probs=39.4
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccce-eeEEeCCCCEEEEEEEecCCCCce
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGF-QSVILNAKEKAEIVFELSPCESLS 746 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~~~ls 746 (776)
+.+.+.++|-|..+..=+--|+|...+.......+. ..+ +++.|.+|++++|.|.|.+ ..+.
T Consensus 96 E~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~---~~~~~~v~v~a~~~~~v~f~i~p-~~~G 158 (252)
T 3hrz_B 96 EQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG---QRYRQQFPIKALSSRAVPFVIVP-LEQG 158 (252)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS---CCEEEEEEECTTEEEEEEEEEEE-CSSE
T ss_pred CEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCC---CceEEEEEECCCCeEEEEEEEEe-ccCC
Confidence 689999999999776544445554433222111111 112 3467999999999999987 3444
No 39
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=45.93 E-value=38 Score=31.45 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=26.7
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcc-cccceee--EEeCCCC--EEEEEEEe
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIK-QLVGFQS--VILNAKE--KAEIVFEL 739 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k-~L~gF~k--v~L~pGe--s~~V~~~l 739 (776)
+|+++++|.|+.....++..=...+... -|.. ....... ..|.||| +.+++|++
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYAV--MPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCCS--SCCCCSEEEEBCCCCCCBTTBEEEEEEEECC
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchhc--cccccccccccccccccCCCCceEEEEEEEE
Confidence 5888899986544455544411111110 0110 0111111 1589999 77767766
No 40
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=45.51 E-value=53 Score=32.97 Aligned_cols=49 Identities=16% Similarity=0.127 Sum_probs=34.4
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceee----EEeCCCCEEEEEEEec
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQS----VILNAKEKAEIVFELS 740 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~k----v~L~pGes~~V~~~l~ 740 (776)
.++++|+|+|+.+ -.||..+.+.......| |-= ..|+||+.++|.|...
T Consensus 39 ~~sl~l~N~~~~P--~LvQsWv~~~~~~~~~p------fivtPPlfRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDYP--MLVQSEVLSEDQKSPAP------FVVTPPLFRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSSC--EEEEEEEECTTSSSBCS------EEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCCc--EEEEEEEEcCCCCccCC------EEEcCCeEEECCCCceEEEEEEC
Confidence 3788999999764 79999998644321112 322 2499999999999654
No 41
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=43.80 E-value=61 Score=27.84 Aligned_cols=40 Identities=20% Similarity=0.343 Sum_probs=25.7
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEec
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELS 740 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~ 740 (776)
+|++.++|.+.+ -+-+ .+.. + |+ +..+.|||+.+++|+.+
T Consensus 47 ~V~~~~~n~d~~--~H~~--~i~~-----------~-~~-~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 47 AVKVVVENKSPI--SEGF--SIDA-----------F-GV-QEVIKAGETKTISFTAD 86 (112)
T ss_dssp EEEEEEEECSSS--CEEE--EEGG-----------G-TE-EEEECTTCEEEEEEECC
T ss_pred EEEEEEEECCCC--eEEE--EEcC-----------C-Cc-eeEeCCCCEEEEEEECC
Confidence 477888999764 1111 1111 1 22 56799999999999864
No 42
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=43.36 E-value=58 Score=27.38 Aligned_cols=17 Identities=12% Similarity=0.309 Sum_probs=13.6
Q ss_pred eEEeCCCCEEEEEEEec
Q 004054 724 SVILNAKEKAEIVFELS 740 (776)
Q Consensus 724 kv~L~pGes~~V~~~l~ 740 (776)
+..|.||++.+++|+.+
T Consensus 60 ~~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 60 DVVVESGKEKNITVKPK 76 (100)
T ss_dssp EEEECTTCEEEEEECCC
T ss_pred ceeecCCcceeEEEecc
Confidence 35689999999888765
No 43
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=42.90 E-value=1.7e+02 Score=25.54 Aligned_cols=59 Identities=7% Similarity=-0.057 Sum_probs=39.9
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 741 (776)
+..+++++|+|+.+.+=.=--.+|==+..+-...|. ...|+++.|.++|+.+|+..-+.
T Consensus 38 g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~--~~~W~~l~l~~~~~~~l~~vapn 96 (112)
T 3o0l_A 38 GFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDE--GVSWKSLKLHGKQQMQVTALSPN 96 (112)
T ss_dssp GCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCT--TCCCEEEEECTTCEEEEEEECSS
T ss_pred CeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCC--CCCcEEEEECCCCeEEEEEECCC
Confidence 578999999999665433222333334544333333 25889999999999999987765
No 44
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=38.82 E-value=39 Score=33.22 Aligned_cols=52 Identities=12% Similarity=0.043 Sum_probs=34.4
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 741 (776)
...+.+++++|+|+.+- +++--.....-. ...+.|-.|+|||+.+|++++++
T Consensus 134 ~~~~~~f~i~N~G~~pL----~I~~v~~scgct-----~~~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPL----RLHSVTTRNPAL-----TAVPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCE----EEEEEEECSTTE-----EEEESCSEECTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCE----EEEEEEeCCCCE-----eeecCCccCCCCCEEEEEEEEec
Confidence 46788999999987643 332111111111 12255677999999999999987
No 45
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=37.52 E-value=29 Score=32.10 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=26.5
Q ss_pred cceeeEEeCCCC-EEEEEEEecCCCCceEEcCCCcE
Q 004054 720 VGFQSVILNAKE-KAEIVFELSPCESLSRAREDGLM 754 (776)
Q Consensus 720 ~gF~kv~L~pGe-s~~V~~~l~~~~~ls~~d~~~~~ 754 (776)
.+|....|.||+ +.+|.|.|.. .+.+-||....|
T Consensus 81 I~f~~g~l~pg~~s~eiQ~Ri~~-~dws~~dqsnDy 115 (146)
T 3zqx_A 81 LEFKDVKLPAGGQTGEIQFVIRY-ADWSFHDQSNDY 115 (146)
T ss_dssp EEECSCEECTTCBCCCEEEEEEE-TTCCCEEGGGCT
T ss_pred EEeCCcEEcCCCceEEEEEEEEc-CCCccccccCCc
Confidence 467777799985 7799999997 578888876544
No 46
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=36.15 E-value=37 Score=40.05 Aligned_cols=57 Identities=14% Similarity=0.006 Sum_probs=42.0
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 741 (776)
+.+.+.++|.|..+...+-.|+|...++......+.+ -+++.|+||++++|.|.|.+
T Consensus 168 D~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~----~~~~~v~a~~~~~v~f~i~~ 224 (767)
T 4fxk_B 168 EQLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGL----AQQVLVPAGSARPVAFSVVP 224 (767)
T ss_dssp CEEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCC----CEEEEECSSCEEECCEEEEE
T ss_pred CEEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCce----eEEEEEcCCCeEEEEEEEEE
Confidence 7899999999998888777777766554332221111 14678999999999999976
No 47
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=35.44 E-value=1.1e+02 Score=30.83 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=35.9
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceee---E-EeCCCCEEEEEEEec
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQS---V-ILNAKEKAEIVFELS 740 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~k---v-~L~pGes~~V~~~l~ 740 (776)
.++++|+|+|+. --.||..+.+..... .|...=.-|-= + .|+||++++|.|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~-~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDV-PPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSS-CGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCcc-CcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 488999999986 579999998644321 12211112322 2 499999999999654
No 48
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=35.16 E-value=97 Score=30.52 Aligned_cols=52 Identities=15% Similarity=0.119 Sum_probs=35.0
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceee----EEeCCCCEEEEEEEecC
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQS----VILNAKEKAEIVFELSP 741 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~k----v~L~pGes~~V~~~l~~ 741 (776)
.++++|+|+|+.+ -.||..+.+...... +. .-|-= ..|+||+.+.|.|....
T Consensus 29 ~~sl~l~N~~~~p--~LvQswv~~~~~~~~-~~---~pFivtPPl~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDYP--VLIQSRIYDENKEKE-SE---DPFVVTPPLFRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSSC--EEEEEEEECTTSCCC-SS---CSEEEESSEEEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCCC--EEEEEEEecCCCCcc-cc---CCEEECCCeEEeCCCCceEEEEEecC
Confidence 4889999999764 799999976443211 10 01221 25899999999997653
No 49
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=33.88 E-value=69 Score=28.74 Aligned_cols=17 Identities=29% Similarity=0.511 Sum_probs=14.3
Q ss_pred EEeCCCCEEEEEEEecC
Q 004054 725 VILNAKEKAEIVFELSP 741 (776)
Q Consensus 725 v~L~pGes~~V~~~l~~ 741 (776)
+.|.||++.+++|+++.
T Consensus 98 ~~l~pG~~~~~~~~~~~ 114 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPA 114 (140)
T ss_dssp CCBCTTEEEEEEEECCS
T ss_pred eeeCCCceeEEEEEeCC
Confidence 45899999999999853
No 50
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=32.95 E-value=52 Score=28.74 Aligned_cols=61 Identities=15% Similarity=0.159 Sum_probs=34.0
Q ss_pred ccceEEEEEEEEecCCCC------------CCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEec
Q 004054 679 ETRKFLVTIGVKNHGEMA------------GKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELS 740 (776)
Q Consensus 679 ~~~~~~vsv~VtNtG~~~------------G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~ 740 (776)
|...++..|+|+|+|+.+ |..|.|..-.....+...-...-.++.. .|+||++.++-|...
T Consensus 17 W~~Gf~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~s~sG~~vt~~n~~wN~-~la~G~s~~fGf~~~ 89 (110)
T 1exg_A 17 WNTGFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNG-SIPAGGTAQFGFNGS 89 (110)
T ss_dssp SSSEEEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEEEEETTEEEEEECSGGG-EECSSEEEEEEEEEE
T ss_pred CCCCEEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEEEccCCEEEEecccccc-eeCCCcEEEEEEEEe
Confidence 335689999999999743 4455555432211111100111123332 488999988777764
No 51
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=31.87 E-value=64 Score=31.12 Aligned_cols=55 Identities=27% Similarity=0.306 Sum_probs=37.2
Q ss_pred ccHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHH-----hcCCCEEEEEeCCCc
Q 004054 476 ASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAE-----AAKKPVILVLLCGGP 541 (776)
Q Consensus 476 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~-----~~~~pvIvVl~~g~P 541 (776)
+.+.+..+..++||.+|++.=+ + +..+|+.-+.+|+.+.. ..+||+.++..+|++
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP~--Y---------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg~ 121 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTPE--Y---------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGM 121 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEECC--B---------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSSS
T ss_pred HHHHHHHHHHHhCCEEEEEcCc--c---------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCCC
Confidence 3456777888999999986522 1 34578888889988864 135666666665444
No 52
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=31.64 E-value=1.2e+02 Score=29.61 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=32.7
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceee----EEeCCCCEEEEEEE
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQS----VILNAKEKAEIVFE 738 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~k----v~L~pGes~~V~~~ 738 (776)
.++++|+|+|+- ---.||..+.+....... -|-= ..|+||+++.|.|.
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWv~~~~~~~~~------pfivtPPl~rl~p~~~q~lRI~ 68 (206)
T 1l4i_A 17 QVQLAVTNNDDK-SSYLIQSWIENAEGKKDA------RFVITPPLFSMQGKKENTLRII 68 (206)
T ss_dssp EEEEEEEECCTT-CEEEEEEEEEETTSCBCS------SEEEESSEEEEESSEEEEEEEE
T ss_pred EEEEEEEeCCCC-ccEEEEEEEecCCCCccC------CEEEcCCeEEECCCCceEEEEE
Confidence 588999999851 256899999864222111 1222 24899999999997
No 53
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=31.60 E-value=1.1e+02 Score=32.53 Aligned_cols=57 Identities=12% Similarity=0.064 Sum_probs=34.6
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeec-CCCCCCCCcccccce-eeEEeCCCCEEEEEEEecCC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKP-ARRGNGRPIKQLVGF-QSVILNAKEKAEIVFELSPC 742 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~-~~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~ 742 (776)
...+-+++|+|||.++..= -+.. +..... +...|.=. .+-.|.|||+.+|++++...
T Consensus 46 ~~~~~~l~i~N~g~~pa~f----~f~~~~~~~~~-~~~wl~v~p~~g~l~Pge~~~i~l~~~v~ 104 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHF----SFIPKLNDSQY-CKPWLRAEPFEGYLEPNETVDISLDVYVS 104 (366)
T ss_dssp CCEEEEEEEEECSSSCEEE----EEECCTTCSSS-SCTTEEEESCEEEECTTCEEEEEEEECBC
T ss_pred CeEEEEEEEEecCCceEEE----EEEeCCCCCCC-CCCcEEEeCCccEECCCCEEEEEEEEEEC
Confidence 3567889999999887543 2222 222111 11112111 23469999999999999874
No 54
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=31.18 E-value=97 Score=35.87 Aligned_cols=57 Identities=21% Similarity=0.126 Sum_probs=39.6
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeec---CCCCCCCCcccccc-eeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKP---ARRGNGRPIKQLVG-FQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~---~~~~~~~P~k~L~g-F~kv~L~pGes~~V~~~l~~ 741 (776)
+.+.|+++|+|..+.. ..|++++.. .+.. .+..+++- =..+.|+|+|++++.+.|..
T Consensus 486 ~df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG--~~~~~~~~~~~~~~L~p~~~~~v~~~i~y 546 (695)
T 1g0d_A 486 TDFDVIVEVKNEGGRD--AHAQLTMLAMAVTYNS--LRRGECQRKTISVTVPAHKAHKEVMRLHY 546 (695)
T ss_dssp CCEEEEEEEEECSSSC--EEEEEEEEEEEECTTC--BCCCCCCEEEEEEEECTTEEEEEEEEECH
T ss_pred CCEEEEEEEEECCCCC--EEEEEEEEEEEEeeCC--cccCceeEeeEEEEECCCceEEEEEEECH
Confidence 5699999999998765 568888764 2222 23333311 12457999999999999986
No 55
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=31.07 E-value=99 Score=30.10 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=33.8
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEe
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFEL 739 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l 739 (776)
.++++|+|+|+. ---.||..+.+.......|..-+=-. ..|+||+++.|.|..
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~ 69 (205)
T 1klf_A 17 QVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPL--FAMKGKKENTLRILD 69 (205)
T ss_dssp EEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSE--EEECSSEEEEEEEEE
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEEe
Confidence 588999999842 14689999987443222221110000 258999999999977
No 56
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=29.25 E-value=82 Score=37.99 Aligned_cols=59 Identities=17% Similarity=0.104 Sum_probs=40.6
Q ss_pred ceEEEEEEEEecCC-CCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGE-MAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~-~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 741 (776)
+.+.+.++|.|..+ .+++-.|+|....+......+. ...=+++.|+||++++|.|.|.+
T Consensus 95 D~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~--~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 95 EQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTK--RRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp CCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSS--SCEEEEEEECTTEEEEEEEEEEE
T ss_pred cEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCC--CcceeEEEECCCCeEEEEEEEEE
Confidence 68999999999988 7777666665443322211111 01125678999999999999987
No 57
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=29.00 E-value=15 Score=38.22 Aligned_cols=57 Identities=21% Similarity=0.480 Sum_probs=33.9
Q ss_pred HhhcCCEEEEEEecCCcccccccCCCCCCCChH--HHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 484 IAKGADHVVLMMGLDQTQEKEELDRVDLVLPGR--QQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 484 ~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~--q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
..+.||+||++.|... ..|.+|.+|----. =.++++++++. .++.|+++. .+|++..
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvv-sNPvd~~ 124 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVV-TNPMDVM 124 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEEC-SSSHHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEe-cCcchhh
Confidence 5689999999988643 45556654421000 12455666666 445555544 6899863
No 58
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=27.75 E-value=62 Score=38.71 Aligned_cols=53 Identities=9% Similarity=0.044 Sum_probs=32.4
Q ss_pred eEEEEEEEEecCCCCCCceEEEEeecCCC----CCCCCcccccce-------eeEEeCCCCEEEEEEE
Q 004054 682 KFLVTIGVKNHGEMAGKHPVLLFVKPARR----GNGRPIKQLVGF-------QSVILNAKEKAEIVFE 738 (776)
Q Consensus 682 ~~~vsv~VtNtG~~~G~evvQlY~~~~~~----~~~~P~k~L~gF-------~kv~L~pGes~~V~~~ 738 (776)
.=+++++|+|||+|+ +||=-+...- ....-...=.|| .-|..+|||+|+|++.
T Consensus 150 ~~~~~~~v~~~~~r~----~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 150 RKAVILKVTSKGDRP----IQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp CEEEEEEEEECCSSC----EEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CceEEEEEEeCCCCc----eEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 457899999999997 7773332111 111111111122 4578899999999985
No 59
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=27.46 E-value=30 Score=36.46 Aligned_cols=58 Identities=31% Similarity=0.375 Sum_probs=29.5
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCC--hHHHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLP--GRQQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
++.+.||+||++.|... .+|.+|.+|--- +--.++.+++.+. .++.++++. ++|+++.
T Consensus 72 ~a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvv-tNPvdi~ 131 (326)
T 3vku_A 72 SDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVA-ANPVDIL 131 (326)
T ss_dssp GGGTTCSEEEECCCCC-------------------CHHHHHHHHHTT-TCCSEEEEC-SSSHHHH
T ss_pred HHhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEc-cCchHHH
Confidence 45789999999988532 355667654211 1124566667666 445555555 6899863
No 60
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=26.69 E-value=37 Score=35.85 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=35.1
Q ss_pred hhcCCEEEEEEecCCcccccccCCCCCCCChH--HHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 485 AKGADHVVLMMGLDQTQEKEELDRVDLVLPGR--QQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 485 a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~--q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
.++||+||++.|... .+|.+|.++-.-.. -.++++++.+. +++.++++. ++|+++.
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvv-tNPvdi~ 144 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELH-PELGTDK 144 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEEC-SSSHHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeC-CCccHHH
Confidence 689999999988642 45667765431111 13455666666 555655555 5898874
No 61
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=26.53 E-value=84 Score=30.05 Aligned_cols=55 Identities=22% Similarity=0.289 Sum_probs=39.6
Q ss_pred ccHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHH---------------hcCCCEEEEEeCCC
Q 004054 476 ASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAE---------------AAKKPVILVLLCGG 540 (776)
Q Consensus 476 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~---------------~~~~pvIvVl~~g~ 540 (776)
+++.+..+..++||.+|++.=. + ...+|..-+.+|+.+.. ..+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P~--y---------~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFPI--W---------WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEEC--B---------TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECch--h---------hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 4456777888999999886521 1 34578888888988842 13688888888888
Q ss_pred c
Q 004054 541 P 541 (776)
Q Consensus 541 P 541 (776)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 7
No 62
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=26.13 E-value=19 Score=38.43 Aligned_cols=56 Identities=20% Similarity=0.306 Sum_probs=32.8
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCChHH----HHHHHHHHHhcCCCEEEEEeCCCcccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQ----QELITRVAEAAKKPVILVLLCGGPVDI 544 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q----~~Li~~va~~~~~pvIvVl~~g~P~~l 544 (776)
++.+.+|+||++.|... .+|.+|.+|- ..- .++.+++.+.+.+.++|++. ++|++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DLl--~~Na~I~~~~~~~i~~~a~~~~~vlvv-sNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDLL--EMNARIFKEQGEAIAAVAASDCRVVVV-GNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHH--HHhHHHHHHHHHHHHhhccCceEEEEe-CCCcch
Confidence 45789999999887542 4566665542 111 23345555543344544444 689876
No 63
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=25.71 E-value=19 Score=37.47 Aligned_cols=58 Identities=21% Similarity=0.465 Sum_probs=33.9
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCCh--HHHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLPG--RQQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~--~q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
++.+.||+||++.|... .+|.+|.++-.-. --.++++++.+. +++.++++. ++|+++.
T Consensus 65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivv-sNPvd~~ 124 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVV-TNPMDVM 124 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEEC-SSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe-CCcchHH
Confidence 45789999999988542 3455554431100 112345556565 555666655 5899873
No 64
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=25.53 E-value=96 Score=30.32 Aligned_cols=50 Identities=20% Similarity=0.135 Sum_probs=30.8
Q ss_pred eEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCccccccee-eEEeCCCCEEEEEEEecCC
Q 004054 682 KFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQ-SVILNAKEKAEIVFELSPC 742 (776)
Q Consensus 682 ~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~-kv~L~pGes~~V~~~l~~~ 742 (776)
..+.+++++|+|+.+=.=. ++ +. |.- ++.-. -..|+|||+.+++|+++..
T Consensus 20 ~~~~~~~i~N~g~~pl~i~-~~--~~-------p~~-~~~~~~~~~I~PG~~g~I~vt~~~~ 70 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVA-VV--SL-------PSF-VSLDDRAFRLQAREPRELNLSLAVP 70 (220)
T ss_dssp CCEEEEEEEECSSSCEEEE-EE--EC-------CTT-EECSCCEEEECSSSCEEEEEEECCC
T ss_pred cceEEEEEEeCCCCceEEE-ec--cC-------CCc-eEeeeCcceeCCCCceEEEEEEcch
Confidence 4567899999998653321 11 11 111 11111 2469999999999999974
No 65
>1wgo_A VPS10 domain-containing receptor sorcs2; polycystic kidney disease, PKD, structural genomics, KIAA1329 protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=25.48 E-value=59 Score=28.93 Aligned_cols=53 Identities=25% Similarity=0.365 Sum_probs=37.6
Q ss_pred cccCCCCCCCCCceeecceeeccccccccccccccccccccccccccCCCCccccccceEEEEEEEEecCCCCCCceEEE
Q 004054 624 VFPFGCGLSYSKYSYKFKAVSQNKLYLNQSSSTKMVENQDVVHYKSVPELGTEFCETRKFLVTIGVKNHGEMAGKHPVLL 703 (776)
Q Consensus 624 ~ypFG~GLSYTtF~ys~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsv~VtNtG~~~G~evvQl 703 (776)
.+.||=| +...|+||+.... +-.|.|..+ +..+|+|+..|. +|.+-+-|
T Consensus 65 qvDfGDG---~~~~Y~Nls~t~~----------------~I~H~Y~~~---------GiyrVt~~AeN~---~G~d~a~l 113 (123)
T 1wgo_A 65 QVDLGDG---FKAMYVNLTLTGE----------------PIRHRYESP---------GIYRVSVRAENT---AGHDEAVL 113 (123)
T ss_dssp EEECSSS---CEEEEESHHHHTC----------------CEEECCSSC---------SCEEEEEEEECS---SCEEEEEE
T ss_pred EEEcCCC---eEEEEEeccccCC----------------CceEEEeCC---------CEEEEEEEEEcc---CCceeEEE
Confidence 5889988 5677888874321 111333332 568999999996 99999999
Q ss_pred Eeec
Q 004054 704 FVKP 707 (776)
Q Consensus 704 Y~~~ 707 (776)
|++-
T Consensus 114 ~l~V 117 (123)
T 1wgo_A 114 FVQV 117 (123)
T ss_dssp EECB
T ss_pred EEEE
Confidence 9975
No 66
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=25.46 E-value=51 Score=29.01 Aligned_cols=16 Identities=13% Similarity=0.052 Sum_probs=11.8
Q ss_pred cE--EEe-CcEEEEEEecC
Q 004054 753 LM--VIE-EGTHFLVVGDE 768 (776)
Q Consensus 753 ~~--~~e-~G~y~i~vG~~ 768 (776)
.| +++ .|+|+|.|...
T Consensus 77 ~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 77 QWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCEEECSSCC-CEEEEECC
T ss_pred eEEEEecCCCcEEEEEEec
Confidence 68 555 89999999854
No 67
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=24.96 E-value=1.2e+02 Score=35.09 Aligned_cols=59 Identities=17% Similarity=0.148 Sum_probs=40.4
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCC-CCCCcccccce-eeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRG-NGRPIKQLVGF-QSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~-~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~ 741 (776)
+.+.|+++++|..+.. ..|+++++.-.-. ...+..+++-= ..+.|+|+|++++.+.|+.
T Consensus 496 ~df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y 556 (692)
T 1vjj_A 496 KEVNLVLLLKNLSRDT--KTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISY 556 (692)
T ss_dssp SCEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECH
T ss_pred CCEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECH
Confidence 4699999999998755 5788887652211 12344444211 2456999999999999976
No 68
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=24.86 E-value=90 Score=35.84 Aligned_cols=52 Identities=6% Similarity=0.017 Sum_probs=32.4
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCC-C-CCCcccccceeeEEe-CCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRG-N-GRPIKQLVGFQSVIL-NAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~-~-~~P~k~L~gF~kv~L-~pGes~~V~~~l~~ 741 (776)
.+.+++-||||.|..++...+. +..|.+- + ..|.+ | .+ +.||+++++++++.
T Consensus 537 ~~~t~~rtvtnvg~~~~ty~~~--v~~p~gv~v~V~P~~-l------~f~~~~~~~~~~vt~~~ 591 (621)
T 3vta_A 537 FNQYFNRTLTSVAPQASTYRAM--ISAPQGLTISVNPNV-L------SFNGLGDRKSFTLTVRG 591 (621)
T ss_dssp EEEEEEEEEEECSSSCEEEEEE--EECCSSEEEEEESSE-E------EECSTTCEEEEEEEEEE
T ss_pred eEEEEEEEEEccCCCCeEEEEE--EECCCCcEEEEecCE-E------EEcCCCcEEEEEEEEEe
Confidence 4678888999999876655444 4444431 1 12332 2 22 56999988888764
No 69
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=24.82 E-value=80 Score=30.16 Aligned_cols=55 Identities=20% Similarity=0.268 Sum_probs=36.5
Q ss_pred cHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHH---------------hcCCCEEEEEeCCCc
Q 004054 477 SIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAE---------------AAKKPVILVLLCGGP 541 (776)
Q Consensus 477 ~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~---------------~~~~pvIvVl~~g~P 541 (776)
.+++..+...+||.+|++.=. + ...+|..-..+|+.+.. ..+|+++++..+|++
T Consensus 84 ~~~~~~~~l~~aD~iv~~~P~--y---------~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~ 152 (208)
T 2hpv_A 84 RFNELTDQFLSADKVVIANPM--W---------NLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGF 152 (208)
T ss_dssp HHHHHHHHHHHCSEEEEEEEC--B---------TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSC
T ss_pred HHHHHHHHHHhCCEEEEEecc--c---------cCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCC
Confidence 355667788999999886521 1 34578877888988753 125666666666655
Q ss_pred c
Q 004054 542 V 542 (776)
Q Consensus 542 ~ 542 (776)
+
T Consensus 153 ~ 153 (208)
T 2hpv_A 153 Y 153 (208)
T ss_dssp C
T ss_pred C
Confidence 4
No 70
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=24.73 E-value=1.1e+02 Score=35.49 Aligned_cols=59 Identities=12% Similarity=-0.005 Sum_probs=41.8
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCC-CCCCcccccce--eeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRG-NGRPIKQLVGF--QSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~-~~~P~k~L~gF--~kv~L~pGes~~V~~~l~~ 741 (776)
+.+.|+++++|..+.. ..|+++++.-.-. ...+..++... ..+.|+|+|+++|.+.|..
T Consensus 487 ~df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 487 SDFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CCEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CCEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 4699999999998765 6788887652221 23455555122 3457999999999999986
No 71
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=24.35 E-value=85 Score=30.42 Aligned_cols=55 Identities=27% Similarity=0.311 Sum_probs=38.3
Q ss_pred cHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHHh---------------cCCCEEEEEeCCCc
Q 004054 477 SIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEA---------------AKKPVILVLLCGGP 541 (776)
Q Consensus 477 ~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~~---------------~~~pvIvVl~~g~P 541 (776)
.+.+..+..+.||.+|++.=. + ...+|..-+.+|+.+... .+|+++++..+|+|
T Consensus 82 ~~~~~~~~~~~aD~iv~~~P~--y---------~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~ 150 (211)
T 3p0r_A 82 VADKYLNQFLEADKVVFGFPL--W---------NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGV 150 (211)
T ss_dssp HHHHHHHHHHHCSEEEEEEEC--B---------TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSC
T ss_pred HHHHHHHHHHhCCEEEEEcCh--h---------cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCC
Confidence 355667788999999986532 1 345788778888887421 25778888777887
Q ss_pred c
Q 004054 542 V 542 (776)
Q Consensus 542 ~ 542 (776)
+
T Consensus 151 ~ 151 (211)
T 3p0r_A 151 Y 151 (211)
T ss_dssp C
T ss_pred C
Confidence 6
No 72
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=24.33 E-value=1.1e+02 Score=35.65 Aligned_cols=59 Identities=12% Similarity=0.150 Sum_probs=40.3
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCC-CCCCcccccc-eeeEEeCCCCEEEEEEEecC
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRG-NGRPIKQLVG-FQSVILNAKEKAEIVFELSP 741 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~-~~~P~k~L~g-F~kv~L~pGes~~V~~~l~~ 741 (776)
+.+.|+++++|..+.. ..|++++..-.-. ...+..+++- =..+.|+|+|++++.+.|..
T Consensus 531 ~df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~~~i~y 591 (731)
T 1ex0_A 531 KDFKLSITFRNNSHNR--YTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQA 591 (731)
T ss_dssp CCEEEEEEEEECSSSC--EEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CCEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEEEEEEECH
Confidence 4699999999998765 6788887652211 1233333321 12456999999999999976
No 73
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=24.20 E-value=37 Score=35.85 Aligned_cols=58 Identities=17% Similarity=0.258 Sum_probs=33.8
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCC--hHHHHHHHHHHHhcCCC-EEEEEeCCCccccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLP--GRQQELITRVAEAAKKP-VILVLLCGGPVDIT 545 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~va~~~~~p-vIvVl~~g~P~~l~ 545 (776)
+..+++|+||++.|... .+|.+|.++--- .--.++++++.+. +++ +++++. ++|+++.
T Consensus 75 ~~~~daDvVvitAg~pr---kpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivv-sNPvd~~ 135 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVV-GNPANTN 135 (333)
T ss_dssp HHTTTCSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEEC-SSSHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEc-CCchHHH
Confidence 45789999999877532 355666554200 0123456667676 444 334444 6898873
No 74
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=23.80 E-value=24 Score=36.95 Aligned_cols=58 Identities=28% Similarity=0.403 Sum_probs=34.4
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCC--hHHHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLP--GRQQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
+..++||+||++.|... .+|.+|.++--- .--.++++++.+. +++.++++. ++|+++.
T Consensus 74 ~a~~~aDvVIiaag~p~---kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvv-sNPvd~~ 133 (315)
T 3tl2_A 74 ADTADSDVVVITAGIAR---KPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVL-TNPVDAM 133 (315)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC-CSSHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEC-CChHHHH
Confidence 35789999999988642 345556443210 0123455666666 455555554 6898873
No 75
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=23.45 E-value=1.3e+02 Score=27.69 Aligned_cols=54 Identities=11% Similarity=0.177 Sum_probs=34.6
Q ss_pred cHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHH-------------hcCCCEEEEEeCCCc
Q 004054 477 SIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAE-------------AAKKPVILVLLCGGP 541 (776)
Q Consensus 477 ~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~-------------~~~~pvIvVl~~g~P 541 (776)
++.+..+...+||.+|++.-. + ...+|..-..+|+.+.. ..+|+++++..+|+|
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~--y---------~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~ 127 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPI--Y---------WFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDN 127 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEEC--B---------TTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSC
T ss_pred CHHHHHHHHHhCCEEEEEeCc--c---------ccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCC
Confidence 455666788999999886532 1 23467766777777642 226777777666653
No 76
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=23.38 E-value=55 Score=37.51 Aligned_cols=58 Identities=16% Similarity=0.091 Sum_probs=39.7
Q ss_pred ceEEEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCEEEE---EEEecCCCCc
Q 004054 681 RKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEI---VFELSPCESL 745 (776)
Q Consensus 681 ~~~~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes~~V---~~~l~~~~~l 745 (776)
+.++++++++|+......-.|.+=+......+. +- =..+.|.+||+.++ +++++. +||
T Consensus 22 e~V~l~~~l~n~t~~~~~gtv~~~v~hl~~~V~----~~--~~~~~l~~G~s~~~~~~~~~~P~-~df 82 (643)
T 3vmn_A 22 EAVHLNLTLNNTTSLAQNITATAEVYSLENKLK----TL--QYTKYLLPNESYTTQKGEFVIPA-NSL 82 (643)
T ss_dssp SCEEEECEEECCSSSCEEEEEEEEEEETTEEEE----EE--EEEEEECTTCEEECCTTSEEECT-TSS
T ss_pred CeEEEEEEEecccCccceeEEEEEEEecccccc----cc--eEEEEecCCCcceeeeeeeecCc-ccc
Confidence 679999999998877665555554444433222 21 02257999999888 889987 677
No 77
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=23.24 E-value=30 Score=36.56 Aligned_cols=57 Identities=25% Similarity=0.377 Sum_probs=34.9
Q ss_pred HhhcCCEEEEEEecCCcccccccCCCCCCCCh--HHHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 484 IAKGADHVVLMMGLDQTQEKEELDRVDLVLPG--RQQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 484 ~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~--~q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
..+.||+||++.|... .+|.+|.+|---- --.++.+++.+. +++.++++. ++|+++.
T Consensus 84 ~~~~aDiVvi~aG~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvv-tNPvdi~ 142 (331)
T 4aj2_A 84 VTANSKLVIITAGARQ---QEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIV-SNPVDIL 142 (331)
T ss_dssp GGTTEEEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEEC-SSSHHHH
T ss_pred HhCCCCEEEEccCCCC---CCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe-cChHHHH
Confidence 5789999999988542 4566676542110 113455666666 555555555 5899873
No 78
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=23.18 E-value=28 Score=36.51 Aligned_cols=58 Identities=29% Similarity=0.453 Sum_probs=33.6
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCC--hHHHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLP--GRQQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
+..+.+|+||++.|... .+|.+|.+|--- .--.++++++.+. +++.++++. ++|+++.
T Consensus 65 ~~~~~aDivii~ag~~r---kpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvv-tNPvd~~ 124 (312)
T 3hhp_A 65 PALEGADVVLISAGVAR---KPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGII-TNPVNTT 124 (312)
T ss_dssp HHHTTCSEEEECCSCSC---CTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEC-SSCHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEe-cCcchhH
Confidence 46789999999888542 345555443100 0113445566666 455555544 6898763
No 79
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=22.69 E-value=24 Score=37.26 Aligned_cols=58 Identities=28% Similarity=0.339 Sum_probs=33.5
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCC--hHHHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLP--GRQQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
++.++||+||++.|... .+|.+|.+|--- .--.++++++.+. .++.++++. ++|+++.
T Consensus 69 ~a~~~aDvVvi~ag~p~---kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvv-tNPvd~~ 128 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQ---KPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVA-TNPVDIL 128 (326)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEEC-SSSHHHH
T ss_pred HHhCCCCEEEEecccCC---CCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEc-CChHHHH
Confidence 35789999999988542 344455443100 0113455666665 445555544 6899873
No 80
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=21.91 E-value=24 Score=37.08 Aligned_cols=58 Identities=16% Similarity=0.326 Sum_probs=30.3
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCC--hHHHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLP--GRQQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
++.++||+||++.|... .+|.+|.++--- .--.++.+++.+. +++.++++. ++|+++.
T Consensus 65 ~a~~~aDvVii~ag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivv-tNPvd~~ 124 (314)
T 3nep_X 65 GPTEDSDVCIITAGLPR---SPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVV-ANPLDVM 124 (314)
T ss_dssp GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEEC-CSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEec-CCchhHH
Confidence 35689999999988542 345555443200 0113345555555 455555554 6899874
No 81
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=21.72 E-value=2.4e+02 Score=27.58 Aligned_cols=52 Identities=8% Similarity=0.029 Sum_probs=33.7
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceee----EEeCCCCEEEEEEEec
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQS----VILNAKEKAEIVFELS 740 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~k----v~L~pGes~~V~~~l~ 740 (776)
.++++|+|+|+. ---.||..+.+..... . .=.-|-= ..|+||+++.|.|...
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~--~--~~~pfivtPPl~rl~p~~~q~lRI~~~ 72 (218)
T 2xg5_A 17 SMTLDISNDNKQ-LPYLAQAWIENENQEK--I--ITGPVIATPPVQRLEPGAKSMVRLSTT 72 (218)
T ss_dssp EEEEEEEECCSS-SCEEEEEEEECTTSCE--E--CSSSEEEECSEEEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCc--c--ccCCEEEcCCeEEECCCCceEEEEEec
Confidence 578999999843 1468999998643211 0 0012322 2489999999999654
No 82
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=21.01 E-value=3.3e+02 Score=26.81 Aligned_cols=51 Identities=14% Similarity=0.140 Sum_probs=33.2
Q ss_pred EEEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceee----EEeCCCCEEEEEEEec
Q 004054 684 LVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQS----VILNAKEKAEIVFELS 740 (776)
Q Consensus 684 ~vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~k----v~L~pGes~~V~~~l~ 740 (776)
.++++|+|+|+.. --.||.++.+....... .-|-= ..|+||+.+.|.|...
T Consensus 17 ~~sl~l~N~~~~~-p~LvQsWid~~~~~~~~-----~pfivtPPlfRlep~~~q~lRIi~~ 71 (224)
T 3gfu_C 17 ALTITVTNNDKER-TFGGQAWVDNIVEKDTR-----PTFVVTPSFFKVKPNGQQTLRIIMA 71 (224)
T ss_dssp CEEEEEEECCSSC-CEEEEEEEEESSCCSCS-----CSEEEESSEEEECTTCEEEEEEEEC
T ss_pred eEEEEEEeCCCCc-cEEEEEEEecCCCCccc-----CCEEEcCCeEEECCCCceEEEEEEC
Confidence 4789999998642 35699999864321111 11322 2499999999999653
No 83
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=20.89 E-value=1.2e+02 Score=29.74 Aligned_cols=54 Identities=15% Similarity=0.377 Sum_probs=37.1
Q ss_pred HHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHHh----------------cCCCEEEEEeCCCc
Q 004054 478 IDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEA----------------AKKPVILVLLCGGP 541 (776)
Q Consensus 478 ~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~~----------------~~~pvIvVl~~g~P 541 (776)
..+..+....||.+|++.=. + ...+|..-..+|+.+... .+|+++++..+|++
T Consensus 85 ~~~l~~~~~~aD~iv~~~P~--y---------~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~ 153 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLPL--H---------NFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGI 153 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEEC--B---------TTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSC
T ss_pred HHHHHHHHHhCCEEEEEcCh--h---------hccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCC
Confidence 45667788999999986632 1 345788778888887532 25677777777776
Q ss_pred c
Q 004054 542 V 542 (776)
Q Consensus 542 ~ 542 (776)
+
T Consensus 154 ~ 154 (223)
T 3u7i_A 154 Y 154 (223)
T ss_dssp C
T ss_pred C
Confidence 5
No 84
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=20.80 E-value=2.7e+02 Score=24.08 Aligned_cols=54 Identities=9% Similarity=0.060 Sum_probs=29.1
Q ss_pred EEEEEEecCCCCCCceEEEEeecCCCCCCCCcccccceeeEEeCCCCE-EEEEEEec
Q 004054 685 VTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEK-AEIVFELS 740 (776)
Q Consensus 685 vsv~VtNtG~~~G~evvQlY~~~~~~~~~~P~k~L~gF~kv~L~pGes-~~V~~~l~ 740 (776)
++++|+=+|...|.-.|.....+-.+....=..-. -..+..+|||+ +++++.+-
T Consensus 21 ~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~--~g~l~F~~Get~k~i~V~I~ 75 (114)
T 3e9t_A 21 FEVRVVRRGDISTYASVEYETQDGTASAGTDFVGR--KGLLSFPPGVDEQRFRIEVI 75 (114)
T ss_dssp EEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCC--EEEEEECTTCCEEEEEEEBC
T ss_pred EEEEEEEECCCCeeEEEEEEeECCccCCCCCceEc--ceEEEEeCCcEEEEEEEEEE
Confidence 45555556666666666655444333221111111 13567899996 66666664
No 85
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=20.22 E-value=37 Score=36.52 Aligned_cols=58 Identities=16% Similarity=0.289 Sum_probs=32.7
Q ss_pred HHHhhcCCEEEEEEecCCcccccccCCCCCCCChHH----HHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 482 VDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQ----QELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 482 ~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q----~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
.+..++||+||++.|.. ..+|.+|.+|- ..- ..+++++.+..++..++++. ++|+++.
T Consensus 103 y~~~~daDvVVitag~p---rkpG~tR~DLl--~~N~~I~k~i~~~i~~~a~p~~ivlVv-sNPvD~~ 164 (375)
T 7mdh_A 103 YEVFEDVDWALLIGAKP---RGPGMERAALL--DINGQIFADQGKALNAVASKNVKVLVV-GNPCNTN 164 (375)
T ss_dssp HHHTTTCSEEEECCCCC---CCTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHH
T ss_pred HHHhCCCCEEEEcCCCC---CCCCCCHHHHH--HHHHHHHHHHHHHHHHhcCCCeEEEEe-cCchhHH
Confidence 35678999999987753 24555665431 111 12334454432345555554 6898874
No 86
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=20.13 E-value=1.6e+02 Score=27.69 Aligned_cols=56 Identities=13% Similarity=0.139 Sum_probs=40.0
Q ss_pred ccHHHHHHHhhcCCEEEEEEecCCcccccccCCCCCCCChHHHHHHHHHHH----------hcCCCEEEEEeCCCcc
Q 004054 476 ASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAE----------AAKKPVILVLLCGGPV 542 (776)
Q Consensus 476 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~----------~~~~pvIvVl~~g~P~ 542 (776)
.++++..+....||.+|+..= -. .+.+|..-+.+|+++.. ..+|+++++..+|+|-
T Consensus 40 ~D~~~~~~~l~~aD~iV~~~P--~y---------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 40 FNVEQEQSLLLQNDRIILEFP--LY---------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp CCHHHHHHHHHTCSEEEEEEE--CB---------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred ccHHHHHHHHHhCCEEEEECC--hh---------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 457777889999999987652 12 34567777788888632 2368888888888775
No 87
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=20.01 E-value=37 Score=35.71 Aligned_cols=58 Identities=19% Similarity=0.308 Sum_probs=31.4
Q ss_pred HHhhcCCEEEEEEecCCcccccccCCCCCCCC--hHHHHHHHHHHHhcCCCEEEEEeCCCccccc
Q 004054 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLP--GRQQELITRVAEAAKKPVILVLLCGGPVDIT 545 (776)
Q Consensus 483 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~va~~~~~pvIvVl~~g~P~~l~ 545 (776)
++.+.||+||++.|... .+|.+|.++--. .--.++++++.+. ++..++++. ++|+++.
T Consensus 71 ~a~~~aDiVIiaag~p~---k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivv-tNPvd~~ 130 (324)
T 3gvi_A 71 AAIEGADVVIVTAGVPR---KPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICI-TNPLDAM 130 (324)
T ss_dssp GGGTTCSEEEECCSCCC---C-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC-CSSHHHH
T ss_pred HHHCCCCEEEEccCcCC---CCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEec-CCCcHHH
Confidence 46789999999988542 344455443100 0113445566666 455555555 5899874
Done!