Query 004056
Match_columns 776
No_of_seqs 476 out of 2412
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 12:50:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 4.8E-29 1.6E-33 262.8 17.4 234 272-508 6-272 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 9.8E-29 3.4E-33 263.3 17.8 235 272-509 7-276 (296)
3 2ep6_A MCTP2 protein; beta san 99.8 1.2E-20 4E-25 177.3 13.6 122 277-402 5-132 (133)
4 2dmh_A Myoferlin; beta-sandwic 99.8 9.2E-20 3.2E-24 172.2 15.7 120 283-403 5-134 (140)
5 1rlw_A Phospholipase A2, CALB 99.8 2.6E-20 8.9E-25 172.7 11.6 116 284-400 2-123 (126)
6 2fk9_A Protein kinase C, ETA t 99.8 3.3E-20 1.1E-24 181.1 11.8 115 282-401 26-156 (157)
7 1wfj_A Putative elicitor-respo 99.8 4.7E-20 1.6E-24 173.4 11.9 121 281-403 6-131 (136)
8 3kwu_A MUNC13-1; calcium bindi 99.8 2.3E-19 7.9E-24 171.3 16.5 115 283-401 15-146 (148)
9 3b7y_A E3 ubiquitin-protein li 99.8 1.3E-19 4.3E-24 174.0 14.7 120 281-402 16-153 (153)
10 1gmi_A Protein kinase C, epsil 99.8 1.6E-19 5.4E-24 170.6 11.8 116 283-403 4-134 (136)
11 2b3r_A Phosphatidylinositol-4- 99.8 1.6E-19 5.6E-24 170.5 11.9 116 275-391 10-133 (134)
12 3m7f_B E3 ubiquitin-protein li 99.8 3.8E-19 1.3E-23 175.3 14.6 121 281-403 4-142 (176)
13 2d8k_A Synaptotagmin VII; exoc 99.8 2.5E-19 8.6E-24 169.8 12.5 119 272-390 13-137 (141)
14 2z0u_A WW domain-containing pr 99.8 6.5E-20 2.2E-24 178.3 8.5 117 272-388 30-155 (155)
15 1rsy_A Synaptotagmin I; calciu 99.8 1.9E-19 6.6E-24 173.1 11.6 117 272-388 29-150 (152)
16 3f04_A Synaptotagmin-1; C2A, c 99.8 2E-19 6.9E-24 170.7 11.0 117 272-388 21-142 (143)
17 2bwq_A Regulating synaptic mem 99.8 3E-19 1E-23 166.2 11.2 115 272-387 5-129 (129)
18 3fbk_A RGS3, RGP3, regulator o 99.8 3.9E-19 1.3E-23 171.3 12.3 122 270-392 12-141 (153)
19 1wfm_A Synaptotagmin XIII; C2 99.8 5.8E-19 2E-23 167.4 12.8 116 272-390 13-134 (138)
20 1v27_A Regulating synaptic mem 99.8 4.2E-19 1.4E-23 167.5 11.1 120 272-392 8-137 (141)
21 3fdw_A Synaptotagmin-like prot 99.8 1.7E-19 5.9E-24 172.5 8.3 118 272-389 10-135 (148)
22 3rdl_A Protein kinase C alpha 99.8 2.2E-19 7.4E-24 168.7 7.7 119 272-393 5-129 (137)
23 2chd_A Rabphilin-3A, exophilin 99.8 5.2E-19 1.8E-23 167.7 9.8 117 272-388 16-140 (142)
24 1a25_A CALB, protein kinase C 99.8 2.6E-19 8.7E-24 171.5 7.6 120 272-394 20-145 (149)
25 3pyc_A E3 ubiquitin-protein li 99.8 2.4E-18 8.3E-23 161.2 13.4 115 283-400 3-131 (132)
26 1ugk_A Synaptotagmin IV, KIAA1 99.8 2.4E-18 8.1E-23 162.5 12.7 119 272-390 9-135 (138)
27 2dmg_A KIAA1228 protein; beta- 99.8 9.7E-19 3.3E-23 165.8 9.9 117 272-389 11-136 (142)
28 2enp_A B/K protein; C2 type 1, 99.8 1.1E-18 3.7E-23 166.6 10.2 118 272-389 13-142 (147)
29 1rh8_A Piccolo protein; beta-s 99.8 2.8E-19 9.6E-24 169.3 5.6 116 272-389 7-139 (142)
30 2q3x_A Regulating synaptic mem 99.8 3.3E-18 1.1E-22 168.2 12.0 114 272-389 19-140 (171)
31 3n5a_A Synaptotagmin-7; calciu 99.7 3.4E-18 1.2E-22 160.5 11.3 112 273-386 4-122 (138)
32 1tjx_A Similar to synaptotagmi 99.7 5.9E-18 2E-22 163.7 12.7 118 272-389 12-148 (159)
33 2cm5_A Rabphilin-3A; protein t 99.7 8.9E-18 3.1E-22 163.8 13.0 115 272-388 24-145 (166)
34 2nq3_A Itchy homolog E3 ubiqui 99.7 5.7E-18 2E-22 167.5 11.0 119 282-403 33-162 (173)
35 1w15_A Synaptotagmin IV; metal 99.7 8E-18 2.7E-22 161.6 9.6 115 272-388 17-138 (153)
36 3nsj_A Perforin-1; pore formin 99.7 1.1E-15 3.7E-20 175.7 20.1 170 215-401 314-503 (540)
37 3jzy_A Intersectin 2; C2 domai 99.7 3.1E-16 1.1E-20 178.2 13.4 119 282-401 384-507 (510)
38 2r83_A Synaptotagmin-1; C2A-C2 99.6 6.5E-15 2.2E-19 154.8 13.5 116 273-388 138-272 (284)
39 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.1E-14 3.8E-19 137.4 12.2 87 283-377 3-91 (131)
40 3l9b_A Otoferlin; C2-domain, b 99.6 1.1E-14 3.8E-19 139.0 10.7 116 283-403 19-141 (144)
41 2cjs_A UNC-13 homolog A, MUNC1 99.5 3.5E-14 1.2E-18 139.7 11.1 87 283-377 12-100 (167)
42 1dqv_A Synaptotagmin III; beta 99.5 4.8E-15 1.6E-19 157.7 4.9 104 272-375 139-249 (296)
43 1cjy_A CPLA2, protein (cytosol 99.5 3.4E-14 1.2E-18 168.3 10.7 112 282-396 15-132 (749)
44 1djx_A PLC-D1, phosphoinositid 99.5 2E-13 6.8E-18 159.8 14.0 115 283-401 495-623 (624)
45 3bxj_A RAS GTPase-activating p 99.4 5E-14 1.7E-18 160.2 0.9 113 284-403 10-158 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.3 1.9E-12 6.4E-17 152.8 9.8 111 282-393 169-285 (674)
47 3ohm_B 1-phosphatidylinositol- 99.1 2E-10 6.9E-15 138.2 11.5 108 285-403 725-846 (885)
48 3qr0_A Phospholipase C-beta (P 99.1 4.2E-10 1.4E-14 134.7 13.7 109 284-403 649-772 (816)
49 2zkm_X 1-phosphatidylinositol- 99.1 2.8E-10 9.6E-15 136.5 12.2 107 284-401 677-798 (799)
50 1yrk_A NPKC-delta, protein kin 98.9 8E-09 2.7E-13 96.2 12.9 109 285-401 6-124 (126)
51 2enj_A NPKC-theta, protein kin 98.9 1.1E-08 3.8E-13 96.4 12.2 111 284-402 9-130 (138)
52 3n5a_A Synaptotagmin-7; calciu 98.6 1.3E-08 4.5E-13 94.8 3.0 96 408-506 36-136 (138)
53 1w15_A Synaptotagmin IV; metal 98.5 3.8E-08 1.3E-12 94.0 4.3 97 408-507 50-151 (153)
54 1tjx_A Similar to synaptotagmi 98.4 1.4E-07 4.7E-12 90.7 4.2 99 407-508 44-147 (159)
55 2cm5_A Rabphilin-3A; protein t 98.3 4.1E-07 1.4E-11 88.1 4.7 115 390-507 22-158 (166)
56 2z0u_A WW domain-containing pr 97.6 3.2E-05 1.1E-09 74.6 3.4 85 407-493 62-154 (155)
57 1wfm_A Synaptotagmin XIII; C2 97.4 0.0001 3.5E-09 69.1 4.4 61 406-470 41-101 (138)
58 2dmg_A KIAA1228 protein; beta- 97.4 0.00011 3.9E-09 68.7 4.2 85 409-496 44-137 (142)
59 3fdw_A Synaptotagmin-like prot 97.3 0.00021 7.1E-09 67.5 5.2 61 407-470 43-103 (148)
60 1v27_A Regulating synaptic mem 97.2 0.00035 1.2E-08 64.9 5.6 61 408-471 41-102 (141)
61 1ugk_A Synaptotagmin IV, KIAA1 97.2 0.00052 1.8E-08 63.9 6.5 85 407-496 42-135 (138)
62 2chd_A Rabphilin-3A, exophilin 97.1 0.0002 6.7E-09 67.0 3.1 87 407-496 48-141 (142)
63 3fbk_A RGS3, RGP3, regulator o 97.1 0.00033 1.1E-08 66.7 4.2 77 390-470 12-104 (153)
64 2bwq_A Regulating synaptic mem 97.0 0.00043 1.5E-08 63.4 4.0 61 408-471 38-99 (129)
65 1rsy_A Synaptotagmin I; calciu 96.9 0.0004 1.4E-08 65.9 3.5 76 390-470 27-119 (152)
66 3f04_A Synaptotagmin-1; C2A, c 96.9 0.00082 2.8E-08 62.8 5.6 58 408-470 54-111 (143)
67 2b3r_A Phosphatidylinositol-4- 96.7 0.0014 4.8E-08 61.0 4.7 61 407-470 38-99 (134)
68 2enp_A B/K protein; C2 type 1, 96.5 0.00062 2.1E-08 64.1 1.2 57 408-469 53-109 (147)
69 1rh8_A Piccolo protein; beta-s 96.3 0.0014 4.9E-08 61.0 2.5 64 407-470 37-107 (142)
70 3rdl_A Protein kinase C alpha 96.2 0.0044 1.5E-07 57.0 5.1 59 407-469 35-93 (137)
71 2d8k_A Synaptotagmin VII; exoc 95.9 0.0019 6.5E-08 60.2 1.3 59 407-470 45-104 (141)
72 2q3x_A Regulating synaptic mem 95.9 0.0051 1.8E-07 59.6 4.2 57 407-469 50-107 (171)
73 1a25_A CALB, protein kinase C 95.8 0.0063 2.2E-07 57.3 4.4 60 407-470 50-109 (149)
74 1rlw_A Phospholipase A2, CALB 94.5 0.06 2E-06 48.7 6.5 57 407-470 25-81 (126)
75 2dmh_A Myoferlin; beta-sandwic 94.5 0.055 1.9E-06 49.9 6.3 71 390-469 5-80 (140)
76 2cjt_A UNC-13 homolog A, MUNC1 93.7 0.1 3.6E-06 48.3 6.6 102 392-506 5-116 (131)
77 3pyc_A E3 ubiquitin-protein li 93.7 0.074 2.5E-06 48.7 5.4 68 393-470 4-77 (132)
78 3m7f_B E3 ubiquitin-protein li 93.6 0.09 3.1E-06 50.8 6.1 75 390-469 6-84 (176)
79 2fk9_A Protein kinase C, ETA t 92.8 0.059 2E-06 52.0 3.5 52 407-469 58-109 (157)
80 3l9b_A Otoferlin; C2-domain, b 92.4 0.1 3.5E-06 49.8 4.4 68 394-469 21-90 (144)
81 3kwu_A MUNC13-1; calcium bindi 92.2 0.18 6.1E-06 47.0 5.8 69 391-470 16-88 (148)
82 1gmi_A Protein kinase C, epsil 92.2 0.083 2.9E-06 48.7 3.5 50 409-469 38-87 (136)
83 2ep6_A MCTP2 protein; beta san 91.6 0.16 5.4E-06 46.5 4.6 70 390-470 11-84 (133)
84 1wfj_A Putative elicitor-respo 91.0 0.21 7.1E-06 45.7 4.8 68 391-469 9-81 (136)
85 3b7y_A E3 ubiquitin-protein li 91.0 0.13 4.5E-06 48.1 3.5 74 390-470 18-97 (153)
86 2nq3_A Itchy homolog E3 ubiqui 90.9 0.18 6.2E-06 49.0 4.4 50 408-469 56-105 (173)
87 2cjs_A UNC-13 homolog A, MUNC1 89.3 0.3 1E-05 47.4 4.5 50 407-469 30-80 (167)
88 3pfq_A PKC-B, PKC-beta, protei 84.1 1.3 4.3E-05 52.0 6.7 60 407-470 191-250 (674)
89 3l4c_A Dedicator of cytokinesi 83.6 7.3 0.00025 39.5 11.2 56 317-372 77-138 (220)
90 1cjy_A CPLA2, protein (cytosol 81.8 1.5 5.2E-05 52.2 6.2 97 390-495 16-127 (749)
91 2wxf_A Phosphatidylinositol-4, 81.5 4.3 0.00015 49.6 10.1 101 284-398 216-337 (940)
92 3nsj_A Perforin-1; pore formin 80.9 1.3 4.4E-05 50.9 5.1 76 407-491 412-490 (540)
93 3jzy_A Intersectin 2; C2 domai 78.9 2.1 7.1E-05 47.9 5.9 54 407-470 406-459 (510)
94 1djx_A PLC-D1, phosphoinositid 76.3 1.7 5.9E-05 50.7 4.3 58 407-469 518-576 (624)
95 3hhm_A Phosphatidylinositol-4, 76.0 11 0.00039 46.5 11.4 102 284-398 354-468 (1091)
96 2zkm_X 1-phosphatidylinositol- 65.8 3.7 0.00013 49.3 4.0 73 391-469 677-755 (799)
97 2yrb_A Protein fantom; beta sa 62.4 27 0.00093 33.5 8.6 120 281-402 14-150 (156)
98 2y3a_A Phosphatidylinositol-4, 59.6 8.2 0.00028 47.8 5.5 71 284-357 352-430 (1092)
99 3bxj_A RAS GTPase-activating p 57.2 2.1 7.1E-05 48.3 -0.2 61 397-467 14-78 (483)
100 1e7u_A Phosphatidylinositol 3- 54.6 39 0.0013 41.3 10.2 90 285-375 218-331 (961)
101 3ohm_B 1-phosphatidylinositol- 51.3 8.1 0.00028 46.9 3.5 72 394-469 725-801 (885)
102 3qr0_A Phospholipase C-beta (P 44.3 9.9 0.00034 45.7 2.7 71 395-468 651-726 (816)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.96 E-value=4.8e-29 Score=262.79 Aligned_cols=234 Identities=23% Similarity=0.333 Sum_probs=193.2
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC---eEEEeeeecCCCCCcceeeEEEeeccCC-CCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWD-SPN 347 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~---~~~kTkvikkTlNP~WnEtF~f~V~~~e-~~~ 347 (776)
+..+|++.|....+.|.|+|++|++|+++|.+|.+||||++++++ +.++|+++++|+||.|||+|.|.+...+ ...
T Consensus 6 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~ 85 (284)
T 2r83_A 6 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGK 85 (284)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTC
T ss_pred eEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcC
Confidence 456899999999999999999999999999999999999999964 5889999999999999999999987533 246
Q ss_pred EEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCC------CceEEEEEEEEEecC------------C---
Q 004056 348 VLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI------KIGRLHLAITVLEES------------A--- 405 (776)
Q Consensus 348 ~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~------~~GeI~LsL~~~~~~------------~--- 405 (776)
.|.|+|||+|.++ |++||++.++|.++..+...+.|++|.+. ..|+|++.+.|.+.. +
T Consensus 86 ~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~~l~v~v~~a~~L~~~ 165 (284)
T 2r83_A 86 TLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKM 165 (284)
T ss_dssp EEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTTEEEEEEEEEESCCCC
T ss_pred EEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCCceEEEEEEeECCCCc
Confidence 8999999999987 99999999999999988888999999752 469999999887641 1
Q ss_pred --CccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC--eeee-eEE-Ee
Q 004056 406 --KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG--QQET-GIW-VH 479 (776)
Q Consensus 406 --k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G--~~~~-gv~-~~ 479 (776)
...+|||+++++. ..+++..++||.+++++.||+||+.+.+.++..+.......+.+++.+. ..+- |-. +.
T Consensus 166 d~~~~~dpyv~v~~~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~ 242 (284)
T 2r83_A 166 DVGGLSDPYVKIHLM---QNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVG 242 (284)
T ss_dssp STTSCCCEEEEEEEE---ETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEE
T ss_pred CCCCCcCeEEEEEEE---eCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEEC
Confidence 1347999999983 3466667899999999999999999988888776655567788888873 2222 443 33
Q ss_pred cCC-cccccccccccCCCCCccceEeecCC
Q 004056 480 QPG-SEVAQTWEPRKGKNRRLDTLVRRVPN 508 (776)
Q Consensus 480 ~pg-~~~~~~W~~~~~~~r~~~~q~~~~~~ 508 (776)
-.. ....+||.+|+.+||++.++||..-.
T Consensus 243 l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 243 YNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp TTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 222 23359999999999999999997653
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.96 E-value=9.8e-29 Score=263.31 Aligned_cols=235 Identities=21% Similarity=0.332 Sum_probs=189.7
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeC---CeEEEeeeecCCCCCcceeeEEEeeccCC-CCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG---PYRFRTKTQRKTLSPKWHEEFNIPISTWD-SPN 347 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg---~~~~kTkvikkTlNP~WnEtF~f~V~~~e-~~~ 347 (776)
+...|++.|....+.|.|+|++|++|+++|.+|.+||||++++. .+.++|+++++|+||+|||+|.|.+...+ ...
T Consensus 7 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 86 (296)
T 1dqv_A 7 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQR 86 (296)
T ss_dssp CEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSC
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCC
Confidence 45689999999999999999999999999999999999999994 47899999999999999999999986432 235
Q ss_pred EEEEEEeecCCCC-CCceeEEEEe-cCcccC-CCccceeeecCCC-----CceEEEEEEEEEecC------------C--
Q 004056 348 VLVIEVRDKDHFV-DDTLGDCTIN-ISDLRD-GQRHDMWIPLQNI-----KIGRLHLAITVLEES------------A-- 405 (776)
Q Consensus 348 ~L~V~VyD~D~~~-Dd~LG~v~I~-L~~L~~-~~~~~~W~~L~~~-----~~GeI~LsL~~~~~~------------~-- 405 (776)
.|+|+|||+|.++ |++||++.++ |.++.. ......|+.|... ..|+|++.++|.+.. +
T Consensus 87 ~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~~~l~v~v~~a~~L~~ 166 (296)
T 1dqv_A 87 KLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAGLLTVTIIKASNLKA 166 (296)
T ss_dssp CCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTTTEEEEEEEEEESCCC
T ss_pred EEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEeccccceeEEEEEEeecCCc
Confidence 7999999999987 9999999996 544443 3456789999642 369999999887642 1
Q ss_pred ---CccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecCe--eee-eEE-E
Q 004056 406 ---KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEGQ--QET-GIW-V 478 (776)
Q Consensus 406 ---k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G~--~~~-gv~-~ 478 (776)
...+|||+++++ ..++++.+++||.+++++.||+||+.+.+.++..........+.+++++.. .+- |.. +
T Consensus 167 ~d~~g~~Dpyv~v~l---~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i 243 (296)
T 1dqv_A 167 MDLTGFSDPYVKASL---ISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRV 243 (296)
T ss_dssp CSSSSCCCEEEEECC---CTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCC
T ss_pred cCCCCCCCcEEEEEE---EeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEE
Confidence 134699999998 346777788999999999999999999888887766667788999998733 222 443 2
Q ss_pred e--cCCcccccccccccCCCCCccceEeecCCc
Q 004056 479 H--QPGSEVAQTWEPRKGKNRRLDTLVRRVPNG 509 (776)
Q Consensus 479 ~--~pg~~~~~~W~~~~~~~r~~~~q~~~~~~~ 509 (776)
. .-+....+||.+|+.+||++.++||..-..
T Consensus 244 ~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 244 GPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp SSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred CCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 2 223224599999999999999999987644
No 3
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=1.2e-20 Score=177.30 Aligned_cols=122 Identities=32% Similarity=0.487 Sum_probs=110.2
Q ss_pred eeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEeec
Q 004056 277 SVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDK 356 (776)
Q Consensus 277 sL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~ 356 (776)
++.|..+.|.|+|+|++|++|+++|..|.+||||++++++++++|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~--~~~~l~i~V~d~ 82 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKD--IHDVLEVTVFDE 82 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESC--TTCEEEEEEEEE
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecC--CCCEEEEEEEEC
Confidence 467888999999999999999999999999999999999999999999999999999999999985 347899999999
Q ss_pred CCCC-CCceeEEEEecCcccCCCccceeeecCC-----CCceEEEEEEEEEe
Q 004056 357 DHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN-----IKIGRLHLAITVLE 402 (776)
Q Consensus 357 D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~-----~~~GeI~LsL~~~~ 402 (776)
|..+ |++||++.++|.++..+. ..|++|.+ ...|+|+|+++|..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 9986 999999999999997643 58999975 24799999999874
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=9.2e-20 Score=172.24 Aligned_cols=120 Identities=23% Similarity=0.293 Sum_probs=107.6
Q ss_pred ceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCcceeeEEEeeccCC--CCCEEEEEEeecCCCC
Q 004056 283 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWD--SPNVLVIEVRDKDHFV 360 (776)
Q Consensus 283 ~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvikkTlNP~WnEtF~f~V~~~e--~~~~L~V~VyD~D~~~ 360 (776)
..|.|.|+|++|++|+.+|. |.+||||++++++++++|+++++++||+|||+|.|.+...+ ....|.|+|||+|.++
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 56899999999999999998 99999999999999999999999999999999999997532 3578999999999986
Q ss_pred -CCceeEEEEecCcccCCCccceeee---cCCC----CceEEEEEEEEEec
Q 004056 361 -DDTLGDCTINISDLRDGQRHDMWIP---LQNI----KIGRLHLAITVLEE 403 (776)
Q Consensus 361 -Dd~LG~v~I~L~~L~~~~~~~~W~~---L~~~----~~GeI~LsL~~~~~ 403 (776)
|++||++.++|.++..+...+.|+. |.+. ..|+|+|+++|.+.
T Consensus 84 ~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 9999999999999988888889988 6442 25999999999885
No 5
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=2.6e-20 Score=172.71 Aligned_cols=116 Identities=25% Similarity=0.426 Sum_probs=103.5
Q ss_pred eeEEEEEEEEecCCCCC---CCCCCCCcEEEEEeCC---eEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEeecC
Q 004056 284 VAYARVEVVEASDMKPS---DLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKD 357 (776)
Q Consensus 284 ~GvL~V~VieA~~L~~~---D~~G~sDPYVkv~Lg~---~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D 357 (776)
.|.|.|+|++|++|+++ |..|.+||||++++++ ++++|+++++|+||+|||+|.|.+... ....|.|+|||+|
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCC-CCCEEEEEEEECC
Confidence 47899999999999984 6678999999999986 789999999999999999999999643 3578999999999
Q ss_pred CCCCCceeEEEEecCcccCCCccceeeecCCCCceEEEEEEEE
Q 004056 358 HFVDDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHLAITV 400 (776)
Q Consensus 358 ~~~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~GeI~LsL~~ 400 (776)
..+|++||++.++|.++..+.....|++|.+...|.|+|+++.
T Consensus 81 ~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 81 YVMDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp SSCCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEEC
T ss_pred CCCCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEe
Confidence 9889999999999999998888999999998667777777654
No 6
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=3.3e-20 Score=181.14 Aligned_cols=115 Identities=26% Similarity=0.463 Sum_probs=102.4
Q ss_pred CceeEEEEEEEEecCCCCCCC----------CCCCCcEEEEEeCCeE-EEeeeecCCCCCcceeeEEEeeccCCCCCEEE
Q 004056 282 EPVAYARVEVVEASDMKPSDL----------NGLADPYVKGQLGPYR-FRTKTQRKTLSPKWHEEFNIPISTWDSPNVLV 350 (776)
Q Consensus 282 ~~~GvL~V~VieA~~L~~~D~----------~G~sDPYVkv~Lg~~~-~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~ 350 (776)
...|.|+|+|++|++|+++|. .|.+||||++++++++ ++|+++++|+||+|||+|.|.+.. .+.|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~---~~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD---GGHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE---ECEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC---CCEEE
Confidence 467999999999999999883 3679999999998854 799999999999999999999874 36899
Q ss_pred EEEeecCCCC-CCceeEEEEecCcccCC----CccceeeecCCCCceEEEEEEEEE
Q 004056 351 IEVRDKDHFV-DDTLGDCTINISDLRDG----QRHDMWIPLQNIKIGRLHLAITVL 401 (776)
Q Consensus 351 V~VyD~D~~~-Dd~LG~v~I~L~~L~~~----~~~~~W~~L~~~~~GeI~LsL~~~ 401 (776)
|+|||+|.++ |++||++.|+|.++..+ ...+.|++|++ .|+|+|+++|.
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 9999999987 99999999999998754 66899999985 89999999874
No 7
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.82 E-value=4.7e-20 Score=173.44 Aligned_cols=121 Identities=21% Similarity=0.324 Sum_probs=108.6
Q ss_pred cCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeec-CCCCCcceeeEEEeeccCCCCCEEEEEEeecCCC
Q 004056 281 KEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQR-KTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHF 359 (776)
Q Consensus 281 ~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvik-kTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D~~ 359 (776)
..+.|.|+|+|++|++|+++|..|.+||||++++++++++|++++ +++||+|||+|.|.+.. ....|.|+|||++.+
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~--~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE--GTTELKAKIFDKDVG 83 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES--SCCEEEEEECCSSSC
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC--CCCEEEEEEEECCCC
Confidence 347899999999999999999999999999999999999999998 89999999999999986 457899999999998
Q ss_pred C-CCceeEEEEecCcc-cCCCccceeeecCC--CCceEEEEEEEEEec
Q 004056 360 V-DDTLGDCTINISDL-RDGQRHDMWIPLQN--IKIGRLHLAITVLEE 403 (776)
Q Consensus 360 ~-Dd~LG~v~I~L~~L-~~~~~~~~W~~L~~--~~~GeI~LsL~~~~~ 403 (776)
+ |++||++.++|.++ ..+.....|++|.. ...|+|+|+++|.+.
T Consensus 84 ~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 84 TEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp TTTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred CCCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeC
Confidence 6 99999999999998 44555788999962 347999999999986
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.81 E-value=2.3e-19 Score=171.29 Aligned_cols=115 Identities=32% Similarity=0.479 Sum_probs=103.7
Q ss_pred ceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEeecCCC---
Q 004056 283 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHF--- 359 (776)
Q Consensus 283 ~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D~~--- 359 (776)
..|.|+|+|++|++|+++|.+|.+||||+++++.++++|+++++|+||.|||+|.|.+... .+.|.|+|||+|..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~--~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS--SDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST--TCEEEEEEEECCCSHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC--CCEEEEEEEECCCCccc
Confidence 3699999999999999999999999999999999999999999999999999999999753 37899999999985
Q ss_pred ---------CCCceeEEEEecCcccCCCccceeeecCCC-----CceEEEEEEEEE
Q 004056 360 ---------VDDTLGDCTINISDLRDGQRHDMWIPLQNI-----KIGRLHLAITVL 401 (776)
Q Consensus 360 ---------~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~-----~~GeI~LsL~~~ 401 (776)
+|++||++.++|.++ ....+.|++|... ..|+|+|+++|.
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 499999999999998 3456899999842 479999999985
No 9
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.81 E-value=1.3e-19 Score=174.02 Aligned_cols=120 Identities=30% Similarity=0.429 Sum_probs=99.3
Q ss_pred cCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEe
Q 004056 281 KEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVR 354 (776)
Q Consensus 281 ~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~------~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~Vy 354 (776)
....+.|+|+|++|++|+.+|..|.+||||++++.+ ..++|+++++|+||+|||+|.|.+.. ....|.|+||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~--~~~~l~~~V~ 93 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP--QQHRLLFEVF 93 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT--TTCEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC--CCCEEEEEEE
Confidence 456799999999999999999999999999999974 58899999999999999999999985 3468999999
Q ss_pred ecCCCC-CCceeEEEEecCcccCCCcc------ceeeecCCC-----CceEEEEEEEEEe
Q 004056 355 DKDHFV-DDTLGDCTINISDLRDGQRH------DMWIPLQNI-----KIGRLHLAITVLE 402 (776)
Q Consensus 355 D~D~~~-Dd~LG~v~I~L~~L~~~~~~------~~W~~L~~~-----~~GeI~LsL~~~~ 402 (776)
|+|.++ |++||++.++|.++..+... ..|++|... ..|+|+|+++|.|
T Consensus 94 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 94 DENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred ECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 999986 99999999999999876543 589999652 3799999999975
No 10
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.80 E-value=1.6e-19 Score=170.57 Aligned_cols=116 Identities=25% Similarity=0.423 Sum_probs=101.8
Q ss_pred ceeEEEEEEEEecCCCCCCCCCC-----------CCcEEEEEeCCe-EEEeeeecCCCCCcceeeEEEeeccCCCCCEEE
Q 004056 283 PVAYARVEVVEASDMKPSDLNGL-----------ADPYVKGQLGPY-RFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLV 350 (776)
Q Consensus 283 ~~GvL~V~VieA~~L~~~D~~G~-----------sDPYVkv~Lg~~-~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~ 350 (776)
..|.|+|+|++|++|+++|.++. +||||+++++.+ ..+|+++++|+||+|||+|.|.+... +.|.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~---~~L~ 80 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG---RKIE 80 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC---CEEE
Confidence 35899999999999999885443 999999999875 47999999999999999999999752 7899
Q ss_pred EEEeecCCCC-CCceeEEEEecCcccCCC--ccceeeecCCCCceEEEEEEEEEec
Q 004056 351 IEVRDKDHFV-DDTLGDCTINISDLRDGQ--RHDMWIPLQNIKIGRLHLAITVLEE 403 (776)
Q Consensus 351 V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~--~~~~W~~L~~~~~GeI~LsL~~~~~ 403 (776)
|+|||+|.++ |++||++.++|.++..+. ..+.|++|++ .|+|+|+++|...
T Consensus 81 ~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 81 LAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEEEEE
T ss_pred EEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEEEec
Confidence 9999999987 999999999999988743 3489999985 8999999999764
No 11
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.80 E-value=1.6e-19 Score=170.51 Aligned_cols=116 Identities=21% Similarity=0.244 Sum_probs=100.6
Q ss_pred eeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEe-----CCeEEEeeeecCCCCCcceeeEEEe-eccCC-CCC
Q 004056 275 WFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQL-----GPYRFRTKTQRKTLSPKWHEEFNIP-ISTWD-SPN 347 (776)
Q Consensus 275 ~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~L-----g~~~~kTkvikkTlNP~WnEtF~f~-V~~~e-~~~ 347 (776)
-|.+.|....+.|.|+|++|+||+. +.+|.+||||++++ ...+++|+++++|+||+|||+|.|. +...+ ...
T Consensus 10 ~~~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~ 88 (134)
T 2b3r_A 10 AVKLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQR 88 (134)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTC
T ss_pred EEEEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcC
Confidence 4678888889999999999999997 77899999999999 3368899999999999999999999 76322 346
Q ss_pred EEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCCCc
Q 004056 348 VLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKI 391 (776)
Q Consensus 348 ~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~ 391 (776)
.|.|+|||+|.++ +++||++.++|.++..+...+.|++|.+...
T Consensus 89 ~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 89 ELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAATY 133 (134)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC---
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCccC
Confidence 8999999999987 9999999999999998888899999987543
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.80 E-value=3.8e-19 Score=175.30 Aligned_cols=121 Identities=28% Similarity=0.439 Sum_probs=99.6
Q ss_pred cCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEe
Q 004056 281 KEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVR 354 (776)
Q Consensus 281 ~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~------~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~Vy 354 (776)
....|.|+|+|++|++|+.++..|.+||||++++++ ++++|+++++++||.|||+|.|.+.. ....|.|+||
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~--~~~~L~~~V~ 81 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP--QRHRILFEVF 81 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT--TTCEEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC--CCCEEEEEEE
Confidence 456899999999999999999999999999999975 67899999999999999999999985 3468999999
Q ss_pred ecCCCC-CCceeEEEEecCcccCCCcc-c-----eeeecCCC-----CceEEEEEEEEEec
Q 004056 355 DKDHFV-DDTLGDCTINISDLRDGQRH-D-----MWIPLQNI-----KIGRLHLAITVLEE 403 (776)
Q Consensus 355 D~D~~~-Dd~LG~v~I~L~~L~~~~~~-~-----~W~~L~~~-----~~GeI~LsL~~~~~ 403 (776)
|+|.++ |++||++.|+|.++..+... + .|+.|... ..|+|+|+++|.+.
T Consensus 82 d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred ECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 999986 99999999999999876443 2 79999752 37999999999986
No 13
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=2.5e-19 Score=169.83 Aligned_cols=119 Identities=28% Similarity=0.488 Sum_probs=105.6
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC---eEEEeeeecCCCCCcceeeEEEeeccCC--CC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWD--SP 346 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~---~~~kTkvikkTlNP~WnEtF~f~V~~~e--~~ 346 (776)
+...+++.|....+.|+|+|++|++|+.+|..|.+||||++++.+ ++++|+++++|+||+|||+|.|.+...+ ..
T Consensus 13 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~ 92 (141)
T 2d8k_A 13 GRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQ 92 (141)
T ss_dssp CEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTT
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHccc
Confidence 456789999999999999999999999999999999999999953 6899999999999999999999853211 24
Q ss_pred CEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCCC
Q 004056 347 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIK 390 (776)
Q Consensus 347 ~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~ 390 (776)
..|.|+|||+|.++ |++||++.++|.++..+...+.|++|.+..
T Consensus 93 ~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 93 RILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp SEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 68999999999986 999999999999999888889999998643
No 14
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=6.5e-20 Score=178.28 Aligned_cols=117 Identities=16% Similarity=0.235 Sum_probs=103.9
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEeeeecCCCCCcceeeEEEeeccCC-
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTKTQRKTLSPKWHEEFNIPISTWD- 344 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~------~~~kTkvikkTlNP~WnEtF~f~V~~~e- 344 (776)
+..+|++.|....+.|+|+|++|+||+++|.+|.+||||++++.+ .++||+++++|+||+|||+|.|.+...+
T Consensus 30 G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l 109 (155)
T 2z0u_A 30 TRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPAL 109 (155)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHH
T ss_pred EEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHh
Confidence 456899999999999999999999999999999999999999976 3799999999999999999999987422
Q ss_pred CCCEEEEEEeecCCCC-CCceeEEEEecCcccC-CCccceeeecCC
Q 004056 345 SPNVLVIEVRDKDHFV-DDTLGDCTINISDLRD-GQRHDMWIPLQN 388 (776)
Q Consensus 345 ~~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~-~~~~~~W~~L~~ 388 (776)
....|.|+|||+|.++ +++||++.++|.++.. +.....|++|.+
T Consensus 110 ~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 110 HQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp HHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred CcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 1358999999999987 9999999999999964 567889999863
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=1.9e-19 Score=173.13 Aligned_cols=117 Identities=29% Similarity=0.476 Sum_probs=105.7
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeC---CeEEEeeeecCCCCCcceeeEEEeeccCC-CCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG---PYRFRTKTQRKTLSPKWHEEFNIPISTWD-SPN 347 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg---~~~~kTkvikkTlNP~WnEtF~f~V~~~e-~~~ 347 (776)
+..++++.|....+.|+|+|++|++|+.+|.+|.+||||++++. .++++|+++++|+||+|||+|.|.+...+ ...
T Consensus 29 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 108 (152)
T 1rsy_A 29 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGK 108 (152)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTC
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCC
Confidence 45689999999999999999999999999999999999999995 36899999999999999999999986422 246
Q ss_pred EEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCC
Q 004056 348 VLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 388 (776)
Q Consensus 348 ~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~ 388 (776)
.|.|+|||+|.++ |++||++.++|.++..+...+.|++|.+
T Consensus 109 ~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 109 TLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 8999999999986 9999999999999988888899999986
No 16
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.79 E-value=2e-19 Score=170.70 Aligned_cols=117 Identities=29% Similarity=0.476 Sum_probs=105.6
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeC---CeEEEeeeecCCCCCcceeeEEEeeccCC-CCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG---PYRFRTKTQRKTLSPKWHEEFNIPISTWD-SPN 347 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg---~~~~kTkvikkTlNP~WnEtF~f~V~~~e-~~~ 347 (776)
+...+++.|....+.|.|+|++|++|+.+|.+|.+||||++++. .++++|+++++|+||+|||+|.|.+...+ ...
T Consensus 21 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 100 (143)
T 3f04_A 21 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGK 100 (143)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTC
T ss_pred EEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCC
Confidence 45678999999999999999999999999999999999999994 36899999999999999999999987422 236
Q ss_pred EEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCC
Q 004056 348 VLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 388 (776)
Q Consensus 348 ~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~ 388 (776)
.|.|+|||+|.++ |++||++.++|.++..+...+.|++|++
T Consensus 101 ~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 101 TLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred EEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 8999999999986 9999999999999999888999999975
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=3e-19 Score=166.16 Aligned_cols=115 Identities=23% Similarity=0.286 Sum_probs=97.9
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeC-----CeEEEeeeecCCCCCcceeeEEEeeccCC--
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG-----PYRFRTKTQRKTLSPKWHEEFNIPISTWD-- 344 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg-----~~~~kTkvikkTlNP~WnEtF~f~V~~~e-- 344 (776)
+...+++.|....+.|.|+|++|+||+++|.+|.+||||++++. ..+++|+++++|+||+|||+|.|.+...+
T Consensus 5 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~ 84 (129)
T 2bwq_A 5 GQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREF 84 (129)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGG
T ss_pred EEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHh
Confidence 34678899999999999999999999999999999999999993 47899999999999999999999953211
Q ss_pred CCCEEEEEEeecCCCC---CCceeEEEEecCcccCCCccceeeecC
Q 004056 345 SPNVLVIEVRDKDHFV---DDTLGDCTINISDLRDGQRHDMWIPLQ 387 (776)
Q Consensus 345 ~~~~L~V~VyD~D~~~---Dd~LG~v~I~L~~L~~~~~~~~W~~L~ 387 (776)
....|.|+|||+|.++ +++||++.++|.++.... .+.|++|+
T Consensus 85 ~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 85 RERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp GGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred cCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 2468999999999986 899999999999988755 88999985
No 18
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.79 E-value=3.9e-19 Score=171.30 Aligned_cols=122 Identities=20% Similarity=0.343 Sum_probs=105.8
Q ss_pred CCCCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCC
Q 004056 270 PQPGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD 344 (776)
Q Consensus 270 ~~~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e 344 (776)
+.+...++|.|....+.|.|+|++|++|+++| +|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+
T Consensus 12 ~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 90 (153)
T 3fbk_A 12 VQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEED 90 (153)
T ss_dssp -CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGG
T ss_pred CCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHH
Confidence 34567899999999999999999999999999 69999999999943 5799999999999999999999985433
Q ss_pred CCCEEEEEEeecCCCC--CCceeEEEEecCcccC-CCccceeeecCCCCce
Q 004056 345 SPNVLVIEVRDKDHFV--DDTLGDCTINISDLRD-GQRHDMWIPLQNIKIG 392 (776)
Q Consensus 345 ~~~~L~V~VyD~D~~~--Dd~LG~v~I~L~~L~~-~~~~~~W~~L~~~~~G 392 (776)
....|.|+|||+|.++ |++||++.++|.++.. +.....|++|.+...|
T Consensus 91 ~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 91 DQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp TTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred hCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 4467999999999973 8999999999999984 6778899999876544
No 19
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=5.8e-19 Score=167.41 Aligned_cols=116 Identities=21% Similarity=0.338 Sum_probs=102.3
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC----eEEEeeeecCCCCCcceeeEEEeeccCCC-C
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP----YRFRTKTQRKTLSPKWHEEFNIPISTWDS-P 346 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~----~~~kTkvikkTlNP~WnEtF~f~V~~~e~-~ 346 (776)
+..+|++.|....+.|+|+|++|+ ++|.+|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+. .
T Consensus 13 G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~ 89 (138)
T 1wfm_A 13 PKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPT 89 (138)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTT
T ss_pred eEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCC
Confidence 456899999999999999999999 467889999999999953 46899999999999999999999875432 4
Q ss_pred CEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCCC
Q 004056 347 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIK 390 (776)
Q Consensus 347 ~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~ 390 (776)
..|.|+|||+|.++ |++||++.++|.++..+...+.|++|.+..
T Consensus 90 ~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 90 ATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp CEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 58999999999987 999999999999998777889999998743
No 20
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=4.2e-19 Score=167.49 Aligned_cols=120 Identities=23% Similarity=0.284 Sum_probs=104.6
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeC-----CeEEEeeeecCCCCCcceeeEEEeeccCC--
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG-----PYRFRTKTQRKTLSPKWHEEFNIPISTWD-- 344 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg-----~~~~kTkvikkTlNP~WnEtF~f~V~~~e-- 344 (776)
+...+++.|....+.|.|+|++|++|+++|.+|.+||||++++. .++++|+++++|+||+|||+|.|.+...+
T Consensus 8 G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~ 87 (141)
T 1v27_A 8 GQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREF 87 (141)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGG
T ss_pred cEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHh
Confidence 45678999999999999999999999999999999999999993 36889999999999999999999953222
Q ss_pred CCCEEEEEEeecCCCC---CCceeEEEEecCcccCCCccceeeecCCCCce
Q 004056 345 SPNVLVIEVRDKDHFV---DDTLGDCTINISDLRDGQRHDMWIPLQNIKIG 392 (776)
Q Consensus 345 ~~~~L~V~VyD~D~~~---Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~G 392 (776)
....|.|+|||++.++ +++||++.++|.++.... ...|++|.+...|
T Consensus 88 ~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g 137 (141)
T 1v27_A 88 RERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSG 137 (141)
T ss_dssp GTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSC
T ss_pred cCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccccC
Confidence 2468999999999986 899999999999987654 7899999876554
No 21
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.78 E-value=1.7e-19 Score=172.54 Aligned_cols=118 Identities=23% Similarity=0.316 Sum_probs=105.9
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCC-CCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSD-LNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D-~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e~ 345 (776)
+...+++.|....+.|.|+|++|++|+++| .+|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+.
T Consensus 10 G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~ 89 (148)
T 3fdw_A 10 GRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLL 89 (148)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTG
T ss_pred eEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHh
Confidence 457899999999999999999999999988 689999999999974 48999999999999999999999875432
Q ss_pred -CCEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCC
Q 004056 346 -PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 389 (776)
Q Consensus 346 -~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~ 389 (776)
...|.|+|||+|.++ |++||++.++|.++..+...+.|++|.++
T Consensus 90 ~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 90 AQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp GGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred CceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 357999999999987 99999999999999887788899999874
No 22
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.77 E-value=2.2e-19 Score=168.65 Aligned_cols=119 Identities=32% Similarity=0.509 Sum_probs=103.2
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEe-----CCeEEEeeeecCCCCCcceeeEEEeeccCCCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQL-----GPYRFRTKTQRKTLSPKWHEEFNIPISTWDSP 346 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~L-----g~~~~kTkvikkTlNP~WnEtF~f~V~~~e~~ 346 (776)
+...+++.| ..+.|.|+|++|++|+.+|..|.+||||++++ ...+++|+++++++||.|||+|.|.+...+..
T Consensus 5 G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~ 82 (137)
T 3rdl_A 5 GRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKD 82 (137)
T ss_dssp CEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGG
T ss_pred eEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcC
Confidence 345677888 56999999999999999999999999999999 34789999999999999999999998754344
Q ss_pred CEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCCCceE
Q 004056 347 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKIGR 393 (776)
Q Consensus 347 ~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~Ge 393 (776)
..|.|+|||+|.++ |++||++.++|.++..+. ...|++|.+...|+
T Consensus 83 ~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 83 RRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred CEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 58999999999986 999999999999997655 78999998755443
No 23
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.77 E-value=5.2e-19 Score=167.69 Aligned_cols=117 Identities=34% Similarity=0.522 Sum_probs=104.7
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEe-eccCCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIP-ISTWDS 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~-V~~~e~ 345 (776)
+...+++.|....+.|.|+|++|++|++++.+|.+||||++++.+ .+++|+++++|+||+|||+|.|. +...+.
T Consensus 16 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~ 95 (142)
T 2chd_A 16 GALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDM 95 (142)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHH
T ss_pred ceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHc
Confidence 446789999999999999999999999999999999999999975 78999999999999999999998 543211
Q ss_pred -CCEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCC
Q 004056 346 -PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 388 (776)
Q Consensus 346 -~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~ 388 (776)
...|.|+|||+|.++ |++||++.++|.++..+.....|+.|+.
T Consensus 96 ~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 96 QRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp HHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred cCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 258999999999987 8999999999999999888999999875
No 24
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=2.6e-19 Score=171.53 Aligned_cols=120 Identities=31% Similarity=0.495 Sum_probs=103.3
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCCCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDSP 346 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e~~ 346 (776)
+...+++.|. .+.|.|+|++|++|+++|..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+..
T Consensus 20 G~l~~~l~~~--~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~ 97 (149)
T 1a25_A 20 GRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKD 97 (149)
T ss_dssp CEEEEEEEES--SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGG
T ss_pred eEEEEEEEec--CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCC
Confidence 3456677774 588999999999999999999999999999963 689999999999999999999998754334
Q ss_pred CEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCCCceEE
Q 004056 347 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRL 394 (776)
Q Consensus 347 ~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~GeI 394 (776)
..|.|+|||+|.++ |++||++.++|.++..+ ..+.|++|.+.+.|++
T Consensus 98 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 98 RRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 68999999999986 99999999999999875 4789999987655554
No 25
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.77 E-value=2.4e-18 Score=161.23 Aligned_cols=115 Identities=19% Similarity=0.318 Sum_probs=99.0
Q ss_pred ceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC--eEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEeecCCCC
Q 004056 283 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP--YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV 360 (776)
Q Consensus 283 ~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~--~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D~~~ 360 (776)
....|+|+|++|++|+++|..|.+||||++++.+ +.++|+++++|+||+|||+|.|.+... +.|.|+|||+|.++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT---DSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT---CCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC---CEEEEEEEECCCCC
Confidence 3568999999999999999999999999999975 889999999999999999999999753 35999999999875
Q ss_pred ----CCceeEEEEecCcc-cCCCccceeeecCCC-------CceEEEEEEEE
Q 004056 361 ----DDTLGDCTINISDL-RDGQRHDMWIPLQNI-------KIGRLHLAITV 400 (776)
Q Consensus 361 ----Dd~LG~v~I~L~~L-~~~~~~~~W~~L~~~-------~~GeI~LsL~~ 400 (776)
|++||++.++|..+ ........|++|... ..|+|++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 79999999999988 333444678888653 27999999875
No 26
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=2.4e-18 Score=162.54 Aligned_cols=119 Identities=24% Similarity=0.300 Sum_probs=102.8
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCC-CCCCcEEEEEeCC---eEEEeeeecCCCCCcceeeEEEe-eccCC-C
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLN-GLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIP-ISTWD-S 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~-G~sDPYVkv~Lg~---~~~kTkvikkTlNP~WnEtF~f~-V~~~e-~ 345 (776)
+...+++.|....+.|.|+|++|++|+++|.. |.+||||++++.+ ++++|+++++|+||+|||+|.|. +...+ .
T Consensus 9 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~ 88 (138)
T 1ugk_A 9 GTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQ 88 (138)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGG
T ss_pred EEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhc
Confidence 45678999999999999999999999999985 8999999999964 79999999999999999999995 65422 2
Q ss_pred CCEEEEEEeecCCCC-CCceeEEEEecCcccCCCc-cceeeecCCCC
Q 004056 346 PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQR-HDMWIPLQNIK 390 (776)
Q Consensus 346 ~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~-~~~W~~L~~~~ 390 (776)
...|.|+|||+|.++ |++||++.++|.++..+.. ...|++|+..+
T Consensus 89 ~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 89 ELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp GCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 358999999999986 9999999999999987644 46779998643
No 27
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=9.7e-19 Score=165.81 Aligned_cols=117 Identities=21% Similarity=0.319 Sum_probs=102.6
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCC-C
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD-S 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e-~ 345 (776)
+..++++.|....+.|.|+|++|++|+++|.+| +||||++++.+ .+++|+++++|+||+|||+|.|.+...+ .
T Consensus 11 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 89 (142)
T 2dmg_A 11 GQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQ 89 (142)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHH
T ss_pred ceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhC
Confidence 446789999999999999999999999999989 99999999953 6889999999999999999999986422 1
Q ss_pred CCEEEEEEeecCCCC---CCceeEEEEecCcccCCCccceeeecCCC
Q 004056 346 PNVLVIEVRDKDHFV---DDTLGDCTINISDLRDGQRHDMWIPLQNI 389 (776)
Q Consensus 346 ~~~L~V~VyD~D~~~---Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~ 389 (776)
...|.|+|||+|.++ +++||++.++|.++..+.....|++|.+.
T Consensus 90 ~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 90 RRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp HCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred cCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 248999999999874 46999999999999887788999999864
No 28
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=1.1e-18 Score=166.62 Aligned_cols=118 Identities=25% Similarity=0.344 Sum_probs=102.7
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCC-CCC------CCCCcEEEEEeCC---eEEEeeeecCCCCCcceeeEEEeec
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPS-DLN------GLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPIS 341 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~-D~~------G~sDPYVkv~Lg~---~~~kTkvikkTlNP~WnEtF~f~V~ 341 (776)
+..++++.|.+..+.|.|+|++|++|+.+ |.+ |.+||||++++.+ ++++|+++++|+||+|||+|.|.+.
T Consensus 13 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (147)
T 2enp_A 13 GMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIP 92 (147)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCC
T ss_pred eEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeC
Confidence 45689999999999999999999999984 443 5899999999974 6889999999999999999999986
Q ss_pred cCC-CCCEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCC
Q 004056 342 TWD-SPNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 389 (776)
Q Consensus 342 ~~e-~~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~ 389 (776)
..+ ....|.|+|||+|.++ +++||++.++|.++........|+.|++.
T Consensus 93 ~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 93 FLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp HHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred hHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 422 1258999999999987 89999999999999887777899999864
No 29
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=2.8e-19 Score=169.31 Aligned_cols=116 Identities=28% Similarity=0.469 Sum_probs=101.0
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCe--------------EEEeeeecCCCCCcceeeEE
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPY--------------RFRTKTQRKTLSPKWHEEFN 337 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~--------------~~kTkvikkTlNP~WnEtF~ 337 (776)
+...+++.|. .|.|.|+|++|++|+++|.+|.+||||++++.+. +++|+++++|+||+|||+|.
T Consensus 7 G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~ 84 (142)
T 1rh8_A 7 GEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVI 84 (142)
T ss_dssp CEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEE
T ss_pred eEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEE
Confidence 3456788887 6899999999999999999999999999999762 57999999999999999999
Q ss_pred Ee-eccCC-CCCEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCCC
Q 004056 338 IP-ISTWD-SPNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 389 (776)
Q Consensus 338 f~-V~~~e-~~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~ 389 (776)
|. +...+ ....|.|+|||+|.++ +++||++.++|.++..+...+.|++|.+.
T Consensus 85 f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 85 YKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp ECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred ECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 97 54211 2468999999999986 99999999999999877778899999874
No 30
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.75 E-value=3.3e-18 Score=168.22 Aligned_cols=114 Identities=22% Similarity=0.212 Sum_probs=100.6
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCC-CCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCCC
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDL-NGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~-~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e~ 345 (776)
+...+++.| ..+.|.|+|++|++|+++|. +|.+||||++++.+ .+++|+++++|+||+|||+|.|.+.. .
T Consensus 19 G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~--~ 94 (171)
T 2q3x_A 19 GDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP--Q 94 (171)
T ss_dssp CEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC--T
T ss_pred cEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC--C
Confidence 456788888 68999999999999999995 79999999999964 38899999999999999999999864 3
Q ss_pred CCEEEEEEe-ecCCCC-CCceeEEEEecCcccCCCccceeeecCCC
Q 004056 346 PNVLVIEVR-DKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNI 389 (776)
Q Consensus 346 ~~~L~V~Vy-D~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~ 389 (776)
...|.|+|| |+|.++ |++||++.++|.++..+...+.|++|.+.
T Consensus 95 ~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 95 GKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 478999999 999987 89999999999999988889999999864
No 31
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.75 E-value=3.4e-18 Score=160.47 Aligned_cols=112 Identities=25% Similarity=0.396 Sum_probs=95.5
Q ss_pred CceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCC-CC
Q 004056 273 GNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD-SP 346 (776)
Q Consensus 273 ~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e-~~ 346 (776)
...+++.|....+.|.|+|++|++|+.+|.+|.+||||++++.+ .+++|+++++|+||.|||+|.|.+...+ ..
T Consensus 4 ~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~ 83 (138)
T 3n5a_A 4 ELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRE 83 (138)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGG
T ss_pred EEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCc
Confidence 45788999999999999999999999999999999999999964 5789999999999999999999987532 13
Q ss_pred CEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeec
Q 004056 347 NVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPL 386 (776)
Q Consensus 347 ~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L 386 (776)
..|.|+|||+|.++ |++||++.++|.++. .....|++|
T Consensus 84 ~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~--~~~~~W~~l 122 (138)
T 3n5a_A 84 TTIIITVMDKDKLSRNDVIGKIYLSWKSGP--GEVKHWKDM 122 (138)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEESSSSCH--HHHHHHHHH
T ss_pred eEEEEEEEECCCCCCCcEEEEEEEccccCC--hHHHHHHHH
Confidence 57999999999986 999999999999753 223445544
No 32
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.75 E-value=5.9e-18 Score=163.73 Aligned_cols=118 Identities=25% Similarity=0.375 Sum_probs=101.4
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCCC-
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS- 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e~- 345 (776)
+...+++.|.+..+.|.|+|++|+||+++|.+|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+.
T Consensus 12 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 91 (159)
T 1tjx_A 12 GDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ 91 (159)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGG
T ss_pred CeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhC
Confidence 456789999999999999999999999999999999999999963 47899999999999999999999874322
Q ss_pred CCEEEEEEeecCCCC-CCceeEEEEecCcc------------cCCCccceeeecCCC
Q 004056 346 PNVLVIEVRDKDHFV-DDTLGDCTINISDL------------RDGQRHDMWIPLQNI 389 (776)
Q Consensus 346 ~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L------------~~~~~~~~W~~L~~~ 389 (776)
...|.|+|||+|.++ |++||++.++|..+ ..+.....|+.|.+.
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 92 KVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred CcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 357999999999987 99999999999964 223456788888763
No 33
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.74 E-value=8.9e-18 Score=163.79 Aligned_cols=115 Identities=29% Similarity=0.406 Sum_probs=99.2
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCC-C
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWD-S 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e-~ 345 (776)
+...+++.|....+.|.|+|++|++|+++|.+|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+ .
T Consensus 24 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 103 (166)
T 2cm5_A 24 GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLA 103 (166)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGG
T ss_pred ceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcC
Confidence 456789999999999999999999999999999999999999975 6899999999999999999999987432 2
Q ss_pred CCEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCC
Q 004056 346 PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 388 (776)
Q Consensus 346 ~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~ 388 (776)
...|.|+|||+|.++ |++||++.++|.++. .....|++|..
T Consensus 104 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~ 145 (166)
T 2cm5_A 104 KKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLK 145 (166)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHHh
Confidence 458999999999987 999999999999863 23455666554
No 34
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=5.7e-18 Score=167.54 Aligned_cols=119 Identities=18% Similarity=0.230 Sum_probs=100.6
Q ss_pred CceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEeecCCCC-
Q 004056 282 EPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 360 (776)
Q Consensus 282 ~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D~~~- 360 (776)
...+.|+|+|++|++|++.+..+.+||||++++++++++|+++++|+||+|||+|.|.+.. ...|.|+|||+|.++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~---~~~L~~~V~D~d~~~~ 109 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP---VSKLHFRVWSHQTLKS 109 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT---TCEEEEEEEECCSSSC
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC---CCEEEEEEEECCCCCC
Confidence 3578999999999999944334459999999999999999999999999999999999853 578999999999986
Q ss_pred CCceeEEEEecCcccCCC-----ccceeeecCCC-----CceEEEEEEEEEec
Q 004056 361 DDTLGDCTINISDLRDGQ-----RHDMWIPLQNI-----KIGRLHLAITVLEE 403 (776)
Q Consensus 361 Dd~LG~v~I~L~~L~~~~-----~~~~W~~L~~~-----~~GeI~LsL~~~~~ 403 (776)
|++||++.++|.++..+. ....|++|... ..|+|++.++|++.
T Consensus 110 dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 110 DVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp CEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred CceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 999999999999986432 13679999753 37999999999875
No 35
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.72 E-value=8e-18 Score=161.64 Aligned_cols=115 Identities=21% Similarity=0.276 Sum_probs=92.6
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCCC-
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS- 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e~- 345 (776)
+...+++.|.+..+.|.|+|++|++|+.+|.+|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+.
T Consensus 17 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 96 (153)
T 1w15_A 17 GELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLE 96 (153)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSST
T ss_pred cEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhC
Confidence 446788999999999999999999999999999999999999943 27899999999999999999999875432
Q ss_pred CCEEEEEEeecCCCC-CCceeEEEEecCcccCCCccceeeecCC
Q 004056 346 PNVLVIEVRDKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQN 388 (776)
Q Consensus 346 ~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~ 388 (776)
...|.|+|||+|.++ |++||++.++|.+ .+.....|+.|..
T Consensus 97 ~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 97 EISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp TEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 357999999999986 9999999999998 3344566666654
No 36
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.67 E-value=1.1e-15 Score=175.74 Aligned_cols=170 Identities=19% Similarity=0.218 Sum_probs=127.7
Q ss_pred Cc-eEEEEEeeccccCCccc-cCcchHHHHHHHHHHHhhhcccC-----C--ceeeecccccCCCCCCcee---------
Q 004056 215 PP-YFQMTVKPIFTHGLDVT-EFPGIAGWLDKLLSIAFEQTLVE-----P--NMLVVDVDKFASPQPGNWF--------- 276 (776)
Q Consensus 215 ~P-~idf~lkpl~~~G~dV~-~iPgLs~~I~~~I~~~l~~~LV~-----P--n~l~Idl~~~~s~~~~~~f--------- 276 (776)
.| .|+|.+.||. ++. ..+--...|+..|.+++...-.. | |-... +. +....+.
T Consensus 314 ~P~~I~~~l~PI~----~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~~-l~----g~~C~C~C~~~~~t~~ 384 (540)
T 3nsj_A 314 NPGLVDYSLEPLH----TLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQHK-SS----HDSCQCECQDSKVTNQ 384 (540)
T ss_dssp SCEEEEEEEEEGG----GGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEEE-CS----SCTTCEEESCTTTBCG
T ss_pred CCceEEEEEEEHH----HhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCcc-CC----CCceEeeCCCCCCccc
Confidence 55 4999999982 222 23556778888888888765433 3 11111 11 1111100
Q ss_pred -eeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEee
Q 004056 277 -SVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRD 355 (776)
Q Consensus 277 -sL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD 355 (776)
...-....|.|+|+|++|++|+. |.+|++||||+|+++.+++||+++++++||+|||+|.|.+...+..+.|+|+|||
T Consensus 385 ~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D 463 (540)
T 3nsj_A 385 DCCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWD 463 (540)
T ss_dssp GGCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEE
T ss_pred ccccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEE
Confidence 01112347899999999999998 9999999999999999999999999999999999999986543346789999999
Q ss_pred cCCCC-CCceeEEEEecCcccCCCccceeeecCCCCceEEEEEEEEE
Q 004056 356 KDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHLAITVL 401 (776)
Q Consensus 356 ~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~GeI~LsL~~~ 401 (776)
+|..+ ||+||++.++|.. +.++.|+.|. .|.|++++++.
T Consensus 464 ~D~~~~dD~LG~~~~~L~~----g~~~~~~~l~---~G~l~~~~~~~ 503 (540)
T 3nsj_A 464 ADYGWDDDLLGSCDRSPHS----GFHEVTCELN---HGRVKFSYHAK 503 (540)
T ss_dssp CCSSSCCEEEEEEEECCCS----EEEEEEEECS---SSEEEEEEEEE
T ss_pred CCCCCCCCEEEEEEEEeeC----CcEEEEEEcC---CeEEEEEEEEE
Confidence 99987 8999999999882 4477899877 59999988754
No 37
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.66 E-value=3.1e-16 Score=178.15 Aligned_cols=119 Identities=27% Similarity=0.491 Sum_probs=106.7
Q ss_pred CceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEeecCCCC-
Q 004056 282 EPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 360 (776)
Q Consensus 282 ~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D~~~- 360 (776)
...|.|.|+|++|++|+++|.+|.+||||++++++++++|+++++|+||.|||+|.|.+... ....|.|+|||+|.++
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~-~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDL-YQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCT-TTCEEEEEEEECCSSSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCC-CCCEEEEEEEeCCCCCC
Confidence 45789999999999999999999999999999999999999999999999999999999753 3468999999999987
Q ss_pred CCceeEEEEecCcccCCCc----cceeeecCCCCceEEEEEEEEE
Q 004056 361 DDTLGDCTINISDLRDGQR----HDMWIPLQNIKIGRLHLAITVL 401 (776)
Q Consensus 361 Dd~LG~v~I~L~~L~~~~~----~~~W~~L~~~~~GeI~LsL~~~ 401 (776)
|++||++.++|.++..+.. ...|+.|.+...|+|++++.+.
T Consensus 463 ~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 9999999999999876543 6789999998899999988764
No 38
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=6.5e-15 Score=154.81 Aligned_cols=116 Identities=26% Similarity=0.390 Sum_probs=98.4
Q ss_pred CceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCCC-C
Q 004056 273 GNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS-P 346 (776)
Q Consensus 273 ~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e~-~ 346 (776)
...+++.|.+..+.|.|+|++|++|+.+|.+|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+. .
T Consensus 138 ~i~l~l~~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 217 (284)
T 2r83_A 138 DICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQK 217 (284)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGG
T ss_pred cEEEEEEecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCc
Confidence 34677888888999999999999999999999999999999853 47899999999999999999999875332 3
Q ss_pred CEEEEEEeecCCCC-CCceeEEEEecCccc------------CCCccceeeecCC
Q 004056 347 NVLVIEVRDKDHFV-DDTLGDCTINISDLR------------DGQRHDMWIPLQN 388 (776)
Q Consensus 347 ~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~------------~~~~~~~W~~L~~ 388 (776)
..|.|+|||+|.++ +++||++.++|..+. .+....+|+.|.+
T Consensus 218 ~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 218 VQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp EEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred eEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 47999999999987 999999999998642 2345578888875
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.57 E-value=1.1e-14 Score=137.38 Aligned_cols=87 Identities=21% Similarity=0.308 Sum_probs=73.2
Q ss_pred ceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeec-CCCCCcceeeEEEeeccCCCCCEEEEEEeecCCCC-
Q 004056 283 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQR-KTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 360 (776)
Q Consensus 283 ~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvik-kTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D~~~- 360 (776)
..+.|.|+|++|++|+. .|.+||||+++ .+..+|++++ +|+||.|||+|.|.+... ...|.|+|||+| ++
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d-~~~ 74 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG-LIW 74 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC--SSEEEEEEEECC-SSC
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC--CCeEEEEEEECC-CCC
Confidence 46899999999999853 68899999999 3445666655 699999999999999853 457999999999 65
Q ss_pred CCceeEEEEecCcccCC
Q 004056 361 DDTLGDCTINISDLRDG 377 (776)
Q Consensus 361 Dd~LG~v~I~L~~L~~~ 377 (776)
|++||++.++|.++...
T Consensus 75 dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 75 DTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEEEEEGGGSCBC
T ss_pred CCeEEEEEEEHHHhhhc
Confidence 99999999999998654
No 40
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.55 E-value=1.1e-14 Score=138.95 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=101.5
Q ss_pred ceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeec-CCCCCcceeeEEEeeccC-CCCCEEEEEEeecCCCC
Q 004056 283 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQR-KTLSPKWHEEFNIPISTW-DSPNVLVIEVRDKDHFV 360 (776)
Q Consensus 283 ~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvik-kTlNP~WnEtF~f~V~~~-e~~~~L~V~VyD~D~~~ 360 (776)
..-.|+|+|.+|.||+ |++|||+++.+.+.+++|++++ +++||+|||.|+|++... +....|.|.|||+++++
T Consensus 19 ~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 19 SHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred CcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 3457999999999998 5889999999999999999998 699999999999998853 34568999999999986
Q ss_pred -CCceeEEEEecCcccCCCccceeeecCCCC----ceEEEEEEEEEec
Q 004056 361 -DDTLGDCTINISDLRDGQRHDMWIPLQNIK----IGRLHLAITVLEE 403 (776)
Q Consensus 361 -Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~----~GeI~LsL~~~~~ 403 (776)
+.+||++.++|.++...+....+..|.+.+ .++|+|.++|.+.
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred CCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCC
Confidence 999999999999999877777777776533 5899999999986
No 41
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.52 E-value=3.5e-14 Score=139.70 Aligned_cols=87 Identities=21% Similarity=0.291 Sum_probs=74.0
Q ss_pred ceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCeEEEeeeec-CCCCCcceeeEEEeeccCCCCCEEEEEEeecCCCC-
Q 004056 283 PVAYARVEVVEASDMKPSDLNGLADPYVKGQLGPYRFRTKTQR-KTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHFV- 360 (776)
Q Consensus 283 ~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~~~kTkvik-kTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D~~~- 360 (776)
..+.|+|+|++|++|+ ..|.+||||+++ .+.++|++++ +++||+|||+|.|.+... ...|.|+|||+| ++
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d-~~~ 83 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG-LIW 83 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT--TSEEEEEEEECC-SSC
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC--CCEEEEEEEECC-CCC
Confidence 4689999999999884 268899999999 4456777765 699999999999999853 457999999999 65
Q ss_pred CCceeEEEEecCcccCC
Q 004056 361 DDTLGDCTINISDLRDG 377 (776)
Q Consensus 361 Dd~LG~v~I~L~~L~~~ 377 (776)
|++||++.|+|.++...
T Consensus 84 dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp CEEEEEEEEEGGGSCBC
T ss_pred CceEEEEEEEHHHhccc
Confidence 99999999999998654
No 42
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.51 E-value=4.8e-15 Score=157.65 Aligned_cols=104 Identities=26% Similarity=0.390 Sum_probs=91.7
Q ss_pred CCceeeeeecCceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-----eEEEeeeecCCCCCcceeeEEEeeccCCC-
Q 004056 272 PGNWFSVDVKEPVAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-----YRFRTKTQRKTLSPKWHEEFNIPISTWDS- 345 (776)
Q Consensus 272 ~~~~fsL~y~~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-----~~~kTkvikkTlNP~WnEtF~f~V~~~e~- 345 (776)
+...+++.|.+..|.|.|+|++|++|+++|..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+...+.
T Consensus 139 G~i~vsl~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 218 (296)
T 1dqv_A 139 GELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVE 218 (296)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGG
T ss_pred ceEEEEEEeccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHcc
Confidence 445688899999999999999999999999999999999999962 57899999999999999999999875321
Q ss_pred CCEEEEEEeecCCCC-CCceeEEEEecCccc
Q 004056 346 PNVLVIEVRDKDHFV-DDTLGDCTINISDLR 375 (776)
Q Consensus 346 ~~~L~V~VyD~D~~~-Dd~LG~v~I~L~~L~ 375 (776)
...|.|+|||+|.++ |++||++.+++..+.
T Consensus 219 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 219 NVGLSIAVVDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp SCCCCCEEEECCSSSCCEEEEECCCSSCTTC
T ss_pred CcEEEEEEEeCCCCCCCceEEEEEECCccCC
Confidence 247999999999987 999999999999764
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.50 E-value=3.4e-14 Score=168.30 Aligned_cols=112 Identities=25% Similarity=0.431 Sum_probs=100.3
Q ss_pred CceeEEEEEEEEecCCCC---CCCCCCCCcEEEEEeCC---eEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEee
Q 004056 282 EPVAYARVEVVEASDMKP---SDLNGLADPYVKGQLGP---YRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRD 355 (776)
Q Consensus 282 ~~~GvL~V~VieA~~L~~---~D~~G~sDPYVkv~Lg~---~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD 355 (776)
.+.+.|+|+|++|++|++ +|..|.+||||++++++ .++||+++++|+||+|||+|.|.+... ....|+|+|||
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~-~~~~L~~~V~D 93 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMD 93 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCBCEEEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCC-CCCEEEEEEEE
Confidence 467999999999999999 88889999999999984 689999999999999999999999863 35689999999
Q ss_pred cCCCCCCceeEEEEecCcccCCCccceeeecCCCCceEEEE
Q 004056 356 KDHFVDDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHL 396 (776)
Q Consensus 356 ~D~~~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~GeI~L 396 (776)
+|.++|++||++.++|.++..+..++.|++|.+. +++.+
T Consensus 94 ~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 94 ANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp CCSSSCEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CCCCCCceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 9998899999999999999988888999999864 45444
No 44
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.47 E-value=2e-13 Score=159.77 Aligned_cols=115 Identities=21% Similarity=0.338 Sum_probs=98.0
Q ss_pred ceeEEEEEEEEecCCCCCCC--CCCCCcEEEEEeCC-----eEEEeeeecCC-CCCcceeeEEEeeccCCCCCEEEEEEe
Q 004056 283 PVAYARVEVVEASDMKPSDL--NGLADPYVKGQLGP-----YRFRTKTQRKT-LSPKWHEEFNIPISTWDSPNVLVIEVR 354 (776)
Q Consensus 283 ~~GvL~V~VieA~~L~~~D~--~G~sDPYVkv~Lg~-----~~~kTkvikkT-lNP~WnEtF~f~V~~~e~~~~L~V~Vy 354 (776)
..+.|+|+|++|++|+.++. +|.+||||+|.+.+ .++||++++++ +||+|||+|.|.+...+ ...|+|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~e-l~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPD-LALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGG-GCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCC-CCEEEEEEE
Confidence 46899999999999999883 78999999999943 68999999997 99999999999998543 358999999
Q ss_pred ecCCCC-CCceeEEEEecCcccCCCccceeeecCCCC-----ceEEEEEEEEE
Q 004056 355 DKDHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIK-----IGRLHLAITVL 401 (776)
Q Consensus 355 D~D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~-----~GeI~LsL~~~ 401 (776)
|+|.++ |++||++.++|..|..+. .|++|.+.. .|.|++.+++.
T Consensus 574 D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp ECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 999986 999999999999998764 588886532 46788887764
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.38 E-value=5e-14 Score=160.24 Aligned_cols=113 Identities=16% Similarity=0.210 Sum_probs=21.5
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCe-EEEeeeecCC---CCCcceeeEEEeeccCCCCCEEEEEEeec-CC
Q 004056 284 VAYARVEVVEASDMKPSDLNGLADPYVKGQLGPY-RFRTKTQRKT---LSPKWHEEFNIPISTWDSPNVLVIEVRDK-DH 358 (776)
Q Consensus 284 ~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~-~~kTkvikkT---lNP~WnEtF~f~V~~~e~~~~L~V~VyD~-D~ 358 (776)
.+.|+|+|++|++|+++| ||||+++++++ ..||+++++| +||+|||+|.|.+... ...|.|+|||. |.
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~--~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA--VRALRLHLYRDSDK 82 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC--ccEEEEEEEecCCc
Confidence 578999999999999887 99999999874 6799999999 9999999999997532 36899999994 52
Q ss_pred ---C-CCCceeEEEEecCcccCCCccceeeecCCC---------------------------CceEEEEEEEEEec
Q 004056 359 ---F-VDDTLGDCTINISDLRDGQRHDMWIPLQNI---------------------------KIGRLHLAITVLEE 403 (776)
Q Consensus 359 ---~-~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~---------------------------~~GeI~LsL~~~~~ 403 (776)
. +|++||++.|++.++..+...+.|++|.+. ..|.|+|++.|.+.
T Consensus 83 ~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 83 KRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred cccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 3 499999999999999988888999999431 14889999999875
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.32 E-value=1.9e-12 Score=152.78 Aligned_cols=111 Identities=32% Similarity=0.498 Sum_probs=97.3
Q ss_pred CceeEEEEEEEEecCCCCCCCCCCCCcEEEEEeC-----CeEEEeeeecCCCCCcceeeEEEeeccCCCCCEEEEEEeec
Q 004056 282 EPVAYARVEVVEASDMKPSDLNGLADPYVKGQLG-----PYRFRTKTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDK 356 (776)
Q Consensus 282 ~~~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg-----~~~~kTkvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~ 356 (776)
...+.|.|+|++|++|+++|.+|.+||||++++. ..+++|+++++|+||.|||+|.|.+...+....|.|+|||+
T Consensus 169 ~~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 169 IDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp ECSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred eccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeec
Confidence 3468999999999999999999999999999993 36789999999999999999999998655556899999999
Q ss_pred CCCC-CCceeEEEEecCcccCCCccceeeecCCCCceE
Q 004056 357 DHFV-DDTLGDCTINISDLRDGQRHDMWIPLQNIKIGR 393 (776)
Q Consensus 357 D~~~-Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~Ge 393 (776)
|..+ |++||++.++|.++.... .+.|+.|.....|+
T Consensus 249 d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~~g~ 285 (674)
T 3pfq_A 249 DLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQEEGE 285 (674)
T ss_dssp CSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCTTGGG
T ss_pred ccccccccccccccchhhhccCC-cccceeecccccce
Confidence 9997 999999999999988654 58899997755443
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.09 E-value=2e-10 Score=138.20 Aligned_cols=108 Identities=20% Similarity=0.346 Sum_probs=88.0
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEeeeecC-CCCCccee-eEEEe-eccCCCCCEEEEEEee
Q 004056 285 AYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTKTQRK-TLSPKWHE-EFNIP-ISTWDSPNVLVIEVRD 355 (776)
Q Consensus 285 GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~------~~~kTkvikk-TlNP~WnE-tF~f~-V~~~e~~~~L~V~VyD 355 (776)
..|.|+|++|++|+.. .+||||+|.+.+ .+++|+++++ ++||+||| +|.|. |...+ ...|+|+|||
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pe-la~Lrf~V~D 799 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPT-LASLRIAAFE 799 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGG-GCEEEEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCC-cCEEEEEEEc
Confidence 4799999999999863 589999999954 3589999976 59999999 69998 65433 3579999999
Q ss_pred cCCCCCCceeEEEEecCcccCCCccceeeecCCCC-----ceEEEEEEEEEec
Q 004056 356 KDHFVDDTLGDCTINISDLRDGQRHDMWIPLQNIK-----IGRLHLAITVLEE 403 (776)
Q Consensus 356 ~D~~~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~-----~GeI~LsL~~~~~ 403 (776)
+| +++||++.+||..|..+.+ +++|.+.. .|.|.+.+.+...
T Consensus 800 ~d---ddfiG~~~lpL~~L~~GyR---~vpL~~~~g~~l~~atLfv~i~~~~~ 846 (885)
T 3ohm_B 800 EG---GKFVGHRILPVSAIRSGYH---YVCLRNEANQPLCLPALLIYTEASDY 846 (885)
T ss_dssp TT---TEEEEEEEEETTTCCCEEE---EEEEECTTSCEEEEEEEEEEEEEEEC
T ss_pred CC---ccEEeeEEEEHHHcCCCce---EEEecCCCCCccCceEEEEEEEEEec
Confidence 87 8999999999999988754 46665532 5788888888764
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.08 E-value=4.2e-10 Score=134.67 Aligned_cols=109 Identities=18% Similarity=0.342 Sum_probs=88.6
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC-------eEEEeeeecC-CCCCcceee-EEEe-eccCCCCCEEEEEE
Q 004056 284 VAYARVEVVEASDMKPSDLNGLADPYVKGQLGP-------YRFRTKTQRK-TLSPKWHEE-FNIP-ISTWDSPNVLVIEV 353 (776)
Q Consensus 284 ~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~-------~~~kTkvikk-TlNP~WnEt-F~f~-V~~~e~~~~L~V~V 353 (776)
.+.|.|+|++|++|+.+ .+||||+|.+.+ ++++|+++++ ++||+|||+ |.|. +...+ -..|+|.|
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe-la~Lrf~V 723 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPD-LAVVRIIV 723 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGG-GCEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCC-ccEEEEEE
Confidence 37899999999999853 589999999954 5789999886 699999998 9998 76433 35899999
Q ss_pred eecCCCCCCceeEEEEecCcccCCCccceeeecCCCC-----ceEEEEEEEEEec
Q 004056 354 RDKDHFVDDTLGDCTINISDLRDGQRHDMWIPLQNIK-----IGRLHLAITVLEE 403 (776)
Q Consensus 354 yD~D~~~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~-----~GeI~LsL~~~~~ 403 (776)
||++ +++||++.+||..|..|.+ +++|.+.. .+.|.+.+.+...
T Consensus 724 ~D~d---ddfiG~~~ipL~~L~~GyR---~vpL~~~~g~~~~~atLfv~i~~~~~ 772 (816)
T 3qr0_A 724 SEEN---GKFIGHRVMPLDGIKPGYR---HVPLRNESNRPLGLASVFAHIVAKDY 772 (816)
T ss_dssp EETT---SCEEEEEEEESTTCCCEEE---EEEEECTTSCEEEEEEEEEEEEEEEC
T ss_pred EecC---CCeeeEEEEEHHHcCCcce---EEEEeCCCCCCCCceEEEEEEEEEec
Confidence 9985 8999999999999998753 56776532 4678888877654
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.08 E-value=2.8e-10 Score=136.47 Aligned_cols=107 Identities=21% Similarity=0.327 Sum_probs=84.8
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCcEEEEEeCC------eEEEee-eecC-CCCCccee-eEEE-eeccCCCCCEEEEEE
Q 004056 284 VAYARVEVVEASDMKPSDLNGLADPYVKGQLGP------YRFRTK-TQRK-TLSPKWHE-EFNI-PISTWDSPNVLVIEV 353 (776)
Q Consensus 284 ~GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~------~~~kTk-vikk-TlNP~WnE-tF~f-~V~~~e~~~~L~V~V 353 (776)
.+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ ++||+||| +|.| .+...+ -..|+|.|
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e-l~~Lr~~V 751 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE-LASLRVAV 751 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG-GCEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCC-ccEEEEEE
Confidence 5789999999999985 4689999999932 368999 7764 69999999 7999 776433 34899999
Q ss_pred eecCCCCCCceeEEEEecCcccCCCccceeeecCCCC-----ceEEEEEEEEE
Q 004056 354 RDKDHFVDDTLGDCTINISDLRDGQRHDMWIPLQNIK-----IGRLHLAITVL 401 (776)
Q Consensus 354 yD~D~~~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~-----~GeI~LsL~~~ 401 (776)
||+| +++||++.+||..|..+. +|++|.+.. .+.|.+.+.+.
T Consensus 752 ~D~d---~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 752 MEEG---NKFLGHRIIPINALNSGY---HHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EETT---TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEeC---CCccceEeeehhhcCCCc---EEEeccCCCCCCCCceEEEEEEEEE
Confidence 9997 899999999999998765 466775532 35566666553
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.94 E-value=8e-09 Score=96.16 Aligned_cols=109 Identities=16% Similarity=0.345 Sum_probs=85.7
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCcEEEEEeCCe----EEEe-eeecCCCCCcceeeEEEeeccCCCCCEEEEEEeecCCC
Q 004056 285 AYARVEVVEASDMKPSDLNGLADPYVKGQLGPY----RFRT-KTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKDHF 359 (776)
Q Consensus 285 GvL~V~VieA~~L~~~D~~G~sDPYVkv~Lg~~----~~kT-kvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D~~ 359 (776)
..|+|.+.++.--+-+......||||.+.+... ..+| .+.++|..|.|||+|.-.+.+ ++.|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~---Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE---GRVIQIVLMRAAE- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT---TCEEEEEEEEETT-
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC---CEEEEEEEEcCCC-
Confidence 568888866553221223346899999998652 2355 677889999999999999985 5789999997655
Q ss_pred CCCceeEEEEecCccc-----CCCccceeeecCCCCceEEEEEEEEE
Q 004056 360 VDDTLGDCTINISDLR-----DGQRHDMWIPLQNIKIGRLHLAITVL 401 (776)
Q Consensus 360 ~Dd~LG~v~I~L~~L~-----~~~~~~~W~~L~~~~~GeI~LsL~~~ 401 (776)
+|+..|+|++.+|. .+...+.|++|++ .|+|++.+.|.
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEe
Confidence 99999999999997 4456799999996 89999999886
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.89 E-value=1.1e-08 Score=96.40 Aligned_cols=111 Identities=17% Similarity=0.358 Sum_probs=87.8
Q ss_pred eeEEEEEEEEecCCCCCC-CCCCCCcEEEEEeCC-e---EEEe-eeecCCCCCcceeeEEEeeccCCCCCEEEEEEeecC
Q 004056 284 VAYARVEVVEASDMKPSD-LNGLADPYVKGQLGP-Y---RFRT-KTQRKTLSPKWHEEFNIPISTWDSPNVLVIEVRDKD 357 (776)
Q Consensus 284 ~GvL~V~VieA~~L~~~D-~~G~sDPYVkv~Lg~-~---~~kT-kvikkTlNP~WnEtF~f~V~~~e~~~~L~V~VyD~D 357 (776)
.+.|+|.+.++.-.+-+. ..-..||||.+.+.. . ..+| .+.++|..|+|||+|.-.+.+ .+.|.|.||+..
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~---Gr~l~i~Vfh~a 85 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK---GRVMQIIVKGKN 85 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS---SCEEEEEEECSS
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC---CeEEEEEEEcCC
Confidence 456888887766433222 134689999999865 2 2677 677789999999999999985 578999999655
Q ss_pred CCCCCceeEEEEecCccc-----CCCccceeeecCCCCceEEEEEEEEEe
Q 004056 358 HFVDDTLGDCTINISDLR-----DGQRHDMWIPLQNIKIGRLHLAITVLE 402 (776)
Q Consensus 358 ~~~Dd~LG~v~I~L~~L~-----~~~~~~~W~~L~~~~~GeI~LsL~~~~ 402 (776)
. +|+..|+|++.+|. .+...+.|++|++ .|+|++.+.|.-
T Consensus 86 ~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~~~ 130 (138)
T 2enj_A 86 V---DLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARYFL 130 (138)
T ss_dssp C---SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEECC
T ss_pred C---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEEE
Confidence 4 99999999999998 4456799999996 899999999853
No 52
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=98.60 E-value=1.3e-08 Score=94.84 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=72.5
Q ss_pred cCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecCe--eee-eEE-Ee-cCC
Q 004056 408 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEGQ--QET-GIW-VH-QPG 482 (776)
Q Consensus 408 ~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G~--~~~-gv~-~~-~pg 482 (776)
.+|||+++++. ..+++..++||.+.+++.||+||+.+.+.++..........+.+++.+.. .+- |-. +. ...
T Consensus 36 ~~dpyv~v~~~---~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 36 TSDPYVKVWLM---YKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp BCCEEEEEEEE---ETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSC
T ss_pred CcCeEEEEEEE---eCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccC
Confidence 57999999984 33445667899999999999999988888876665556678888888733 222 433 32 233
Q ss_pred cccccccccccCCCCCccceEeec
Q 004056 483 SEVAQTWEPRKGKNRRLDTLVRRV 506 (776)
Q Consensus 483 ~~~~~~W~~~~~~~r~~~~q~~~~ 506 (776)
....+||.++..+++++.++||..
T Consensus 113 ~~~~~~W~~l~~~~~~~~~~Wh~L 136 (138)
T 3n5a_A 113 PGEVKHWKDMIARPRQPVAQWHQL 136 (138)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEEEC
T ss_pred ChHHHHHHHHHhCCCCeEEEEeec
Confidence 344599999999999999999964
No 53
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=98.54 E-value=3.8e-08 Score=93.97 Aligned_cols=97 Identities=13% Similarity=0.126 Sum_probs=73.3
Q ss_pred cCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC--eeee-eEE-Ee-cCC
Q 004056 408 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG--QQET-GIW-VH-QPG 482 (776)
Q Consensus 408 ~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G--~~~~-gv~-~~-~pg 482 (776)
.+|||+++++. ..+++..++||.+.+++.||+||+.+.+.++..+.......+.+++.+. ..+- |-. +. ...
T Consensus 50 ~~dpyv~v~~~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~ 126 (153)
T 1w15_A 50 LSDPYVKVNLY---HAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAE 126 (153)
T ss_dssp CCCEEEEEEEE---ETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCC
T ss_pred CCCeEEEEEEE---eCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCC
Confidence 47999999883 3455556789999999999999999988888776666677888898873 2222 443 22 112
Q ss_pred cccccccccccCCCCCccceEeecC
Q 004056 483 SEVAQTWEPRKGKNRRLDTLVRRVP 507 (776)
Q Consensus 483 ~~~~~~W~~~~~~~r~~~~q~~~~~ 507 (776)
.....||.+++.+|+.++++||..-
T Consensus 127 ~~~~~~W~~l~~~p~~~~~~Wh~L~ 151 (153)
T 1w15_A 127 GSGGGHWKEICDFPRRQIAKWHMLC 151 (153)
T ss_dssp SHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred chHHHHHHHHHhCCCCeeeeccccc
Confidence 2335999999999999999999754
No 54
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=98.40 E-value=1.4e-07 Score=90.71 Aligned_cols=99 Identities=16% Similarity=0.124 Sum_probs=73.3
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecCe--eee-eEE-Eec-C
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEGQ--QET-GIW-VHQ-P 481 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G~--~~~-gv~-~~~-p 481 (776)
..+|||+++++. ..+++..++||.+.+++.||+||+.+.+.++..+.......+.+++.+.. .+- |-. +.- .
T Consensus 44 g~~dpyv~v~l~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 44 GLSDPYVKIHLM---QNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNS 120 (159)
T ss_dssp SCCCEEEEEEEE---ETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred CCCCeEEEEEEE---eCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCC
Confidence 357999999883 34555667899999999999999998888876665556677888888742 222 433 332 1
Q ss_pred CcccccccccccCCCCCccceEeecCC
Q 004056 482 GSEVAQTWEPRKGKNRRLDTLVRRVPN 508 (776)
Q Consensus 482 g~~~~~~W~~~~~~~r~~~~q~~~~~~ 508 (776)
-+...+||.+++..++.+.++||..-.
T Consensus 121 ~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 121 TGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp CHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 123359999999999999999997654
No 55
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=98.29 E-value=4.1e-07 Score=88.15 Aligned_cols=115 Identities=10% Similarity=0.101 Sum_probs=80.9
Q ss_pred CceEEEEEEEEEec------------CC-----CccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCC
Q 004056 390 KIGRLHLAITVLEE------------SA-----KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVS 452 (776)
Q Consensus 390 ~~GeI~LsL~~~~~------------~~-----k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp 452 (776)
..|+|++++.|.+. ++ ...+|||+++++. ..+.+..++||.+.+++.||+||+.+.+.++
T Consensus 22 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 98 (166)
T 2cm5_A 22 ERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLK---PDMGKKAKHKTQIKKKTLNPEFNEEFFYDIK 98 (166)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE---TC---CCEEECCCCCSCSSCEEEEEEEEECC
T ss_pred ccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEE---CCCCccceEeCCcccCCCCCcccceEEEEcc
Confidence 35777777776543 11 2357999999984 2334456789999999999999999888887
Q ss_pred CCCCCCCCCceEEEEecCe--eee-eEE-Eec-CCcccccccccccCCCCCccceEeecC
Q 004056 453 SEKSPKVADNFEPINIEGQ--QET-GIW-VHQ-PGSEVAQTWEPRKGKNRRLDTLVRRVP 507 (776)
Q Consensus 453 ~~~~~~~~d~~~vi~~~G~--~~~-gv~-~~~-pg~~~~~~W~~~~~~~r~~~~q~~~~~ 507 (776)
..+.......+.+++.+.. .+- |.. +.- .-....+||.++..+++.+.++||..-
T Consensus 99 ~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~ 158 (166)
T 2cm5_A 99 HSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQ 158 (166)
T ss_dssp GGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECB
T ss_pred hHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECC
Confidence 6665566778888888733 222 443 331 222345899999999999999999765
No 56
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=97.57 E-value=3.2e-05 Score=74.62 Aligned_cols=85 Identities=7% Similarity=-0.069 Sum_probs=57.7
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC--eeee-eEE-Ee--c
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG--QQET-GIW-VH--Q 480 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G--~~~~-gv~-~~--~ 480 (776)
..+|||+++++... .+.+..++||.+++++.||+||+.+.+.++..+.......+.+++++. ..+- |-. +. .
T Consensus 62 g~sDPyVkv~l~~~--~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~ 139 (155)
T 2z0u_A 62 QDQKVNIRVAVLPC--SESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAE 139 (155)
T ss_dssp CCSEEEEEEEEESC--SCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTT
T ss_pred CCCCEEEEEEEecC--CCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHH
Confidence 45899999998421 223344789999999999999999988887655555677889999983 3332 433 22 1
Q ss_pred --CCccccccccccc
Q 004056 481 --PGSEVAQTWEPRK 493 (776)
Q Consensus 481 --pg~~~~~~W~~~~ 493 (776)
+.+....+|.+++
T Consensus 140 l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 140 VCRSGERSTRWYNLL 154 (155)
T ss_dssp SCTTCCCEEEEEEEB
T ss_pred ccCCCCccccceEcc
Confidence 2234446776653
No 57
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=97.39 E-value=0.0001 Score=69.06 Aligned_cols=61 Identities=10% Similarity=0.119 Sum_probs=48.4
Q ss_pred CccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC
Q 004056 406 KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 406 k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G 470 (776)
...+|||+++++.. .. ...++||.+++++.||+||+.+.+.++..+.......+.+++.+.
T Consensus 41 ~g~sDPyv~v~l~~---~~-~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~ 101 (138)
T 1wfm_A 41 DGGCDCYVQGSVAN---RT-GSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR 101 (138)
T ss_dssp SSCCCEEEEEEEEE---TT-EEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS
T ss_pred CCCcceEEEEEEEc---CC-CcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC
Confidence 34689999998831 11 224678999999999999999998888777777778899999873
No 58
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.36 E-value=0.00011 Score=68.66 Aligned_cols=85 Identities=15% Similarity=0.072 Sum_probs=59.0
Q ss_pred CCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC--ee-e-e-eEE-Ee--c
Q 004056 409 DSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG--QQ-E-T-GIW-VH--Q 480 (776)
Q Consensus 409 ~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G--~~-~-~-gv~-~~--~ 480 (776)
+|||+++++. ..+++..++||.+.+++.||+||+.+.+.++..+.......+.+++.+. .. + - |-. +. .
T Consensus 44 ~dpyv~v~l~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~ 120 (142)
T 2dmg_A 44 SDPYVRMYLL---PDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALAS 120 (142)
T ss_dssp CCEEEEEEEE---SCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCC
T ss_pred CCeeEEEEEE---cCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEeccc
Confidence 7999999983 3455567889999999999999999888876555444567788888873 21 2 2 443 22 1
Q ss_pred -CCcccccccccccCCC
Q 004056 481 -PGSEVAQTWEPRKGKN 496 (776)
Q Consensus 481 -pg~~~~~~W~~~~~~~ 496 (776)
.......+|.++....
T Consensus 121 ~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 121 EELAKGWTQWYDLTEDS 137 (142)
T ss_dssp STTTTCBCCBCCCBCSC
T ss_pred ccccccccceeeccCCC
Confidence 1122457888887654
No 59
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=97.29 E-value=0.00021 Score=67.51 Aligned_cols=61 Identities=11% Similarity=0.021 Sum_probs=49.3
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G 470 (776)
..+|||+++++. ..+++..++||.+++++.||+||+.+.+.++..+.......+.+++.+.
T Consensus 43 ~~~dpyv~v~l~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~ 103 (148)
T 3fdw_A 43 KRSNPYVKTYLL---PDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR 103 (148)
T ss_dssp TBCCEEEEEEEE---TCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG
T ss_pred CCCCeEEEEEEE---cCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC
Confidence 357999999983 3455566889999999999999999888888777666677888998873
No 60
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=97.18 E-value=0.00035 Score=64.88 Aligned_cols=61 Identities=5% Similarity=-0.083 Sum_probs=46.9
Q ss_pred cCCCcccccccccCCCCcccccccceeecCCCceEEEeccccc-CCCCCCCCCCCceEEEEecCe
Q 004056 408 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSS-VSSEKSPKVADNFEPINIEGQ 471 (776)
Q Consensus 408 ~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~-Lp~~~~~~~~d~~~vi~~~G~ 471 (776)
.+|||+++++. ..+....++||.+.+++.||+||+.+.+. ++..+.......+.+++.+..
T Consensus 41 ~~dpyv~v~~~---~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~ 102 (141)
T 1v27_A 41 PRNPYVKIYFL---PDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARV 102 (141)
T ss_dssp CCCEEEECCCS---SCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSS
T ss_pred CCCCEEEEEEe---cCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCC
Confidence 47999999883 33344567899999999999999988887 455555566778888888743
No 61
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=97.17 E-value=0.00052 Score=63.89 Aligned_cols=85 Identities=9% Similarity=-0.001 Sum_probs=58.0
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEeccccc-CCCCCCCCCCCceEEEEecCe--eee-eEE-Ee--
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSS-VSSEKSPKVADNFEPINIEGQ--QET-GIW-VH-- 479 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~-Lp~~~~~~~~d~~~vi~~~G~--~~~-gv~-~~-- 479 (776)
..+|||+++++.. .++ .++||.+.+++.||+||+.+.+. ++..+.......+.+++.+.- .+- |-. +.
T Consensus 42 ~~~dpyv~v~~~~---~~~--~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~ 116 (138)
T 1ugk_A 42 MTSDPYIKMTILP---EKK--HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLS 116 (138)
T ss_dssp TBCEEEEEEEEET---TTC--SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECT
T ss_pred CCCCCEEEEEEec---CCC--ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehh
Confidence 4579999998842 222 57899999999999999988874 777666666778888888732 222 433 22
Q ss_pred --cCCcccccccccccCCC
Q 004056 480 --QPGSEVAQTWEPRKGKN 496 (776)
Q Consensus 480 --~pg~~~~~~W~~~~~~~ 496 (776)
..+.+....|.+++.++
T Consensus 117 ~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 117 GIELSEGKMLMNREIISGP 135 (138)
T ss_dssp TCCCTTCCEEEEEECBSSS
T ss_pred HccCCCCcchhhhhhhcCC
Confidence 23334345667777665
No 62
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=97.12 E-value=0.0002 Score=67.02 Aligned_cols=87 Identities=9% Similarity=0.045 Sum_probs=55.8
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEeccccc-CCCCCCCCCCCceEEEEecC--eeee-eEE-Ee--
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSS-VSSEKSPKVADNFEPINIEG--QQET-GIW-VH-- 479 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~-Lp~~~~~~~~d~~~vi~~~G--~~~~-gv~-~~-- 479 (776)
..+|||+++.+. ..+.+..++||.+.+++.||+||+.+.+. ++..+.......+.+++.+. ..+- |-. +.
T Consensus 48 g~~dpyv~v~~~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~ 124 (142)
T 2chd_A 48 GLADPYVKLHLL---PGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLK 124 (142)
T ss_dssp SCCCEEEEEEEE---SCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGG
T ss_pred CCCCCEEEEEEE---cCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHH
Confidence 357999999984 33445567899999999999999987776 55444434567788888873 2222 433 22
Q ss_pred cCCcccccccccccCCC
Q 004056 480 QPGSEVAQTWEPRKGKN 496 (776)
Q Consensus 480 ~pg~~~~~~W~~~~~~~ 496 (776)
.-..+...+|.-++.+|
T Consensus 125 ~l~~~~~~~~~~~L~~p 141 (142)
T 2chd_A 125 KLKANQRKNFNICLERV 141 (142)
T ss_dssp GCCTTCCEEEEEECBCC
T ss_pred HcCCCCccEEEEecccC
Confidence 11112246666655543
No 63
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=97.07 E-value=0.00033 Score=66.69 Aligned_cols=77 Identities=14% Similarity=0.053 Sum_probs=55.4
Q ss_pred CceEEEEEEEEEecC------------C----CccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCC
Q 004056 390 KIGRLHLAITVLEES------------A----KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSS 453 (776)
Q Consensus 390 ~~GeI~LsL~~~~~~------------~----k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~ 453 (776)
..|+++|+|+|.+.. + ...+|||+++++. ..++...++||.+.+++.||+||+.+.+.++.
T Consensus 12 ~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 88 (153)
T 3fbk_A 12 VQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLI---PEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQE 88 (153)
T ss_dssp -CCCCEEEEEEEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEE---SCSCCTTCEECCCCTTCSSCEEEEEEEEECCG
T ss_pred CCCEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEE---cCCCCccEEeccccCCCCCCccccEEEEeccc
Confidence 356676666665541 1 2357999999984 34445578899999999999999998888866
Q ss_pred CCCCCCCCceEEEEecC
Q 004056 454 EKSPKVADNFEPINIEG 470 (776)
Q Consensus 454 ~~~~~~~d~~~vi~~~G 470 (776)
.+.... ..+.+++.+.
T Consensus 89 ~~~~~~-L~i~V~d~d~ 104 (153)
T 3fbk_A 89 EDDQKR-LLVTVWNRAS 104 (153)
T ss_dssp GGTTSE-EEEEEEECCS
T ss_pred HHhCCE-EEEEEEeCCC
Confidence 555433 7788888874
No 64
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.99 E-value=0.00043 Score=63.39 Aligned_cols=61 Identities=3% Similarity=-0.111 Sum_probs=44.5
Q ss_pred cCCCcccccccccCCCCcccccccceeecCCCceEEEecccccC-CCCCCCCCCCceEEEEecCe
Q 004056 408 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-SSEKSPKVADNFEPINIEGQ 471 (776)
Q Consensus 408 ~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~L-p~~~~~~~~d~~~vi~~~G~ 471 (776)
.+|||+++.+. ..+....++||.+.+++.||+||+.+.+.+ +..+.......+.+++.+..
T Consensus 38 ~~dpyv~v~~~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~ 99 (129)
T 2bwq_A 38 PRNPYVKIYFL---PDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARV 99 (129)
T ss_dssp CBCEEEEEEEE---SSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC---
T ss_pred CCCCEEEEEEe---cCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcC
Confidence 47999999884 334445678999999999999999888874 44444556677888888743
No 65
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.94 E-value=0.0004 Score=65.92 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=54.2
Q ss_pred CceEEEEEEEEEec------------CC-----CccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCC
Q 004056 390 KIGRLHLAITVLEE------------SA-----KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVS 452 (776)
Q Consensus 390 ~~GeI~LsL~~~~~------------~~-----k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp 452 (776)
..|+|++++.|.+. ++ ...+|||+++++.. .++ .++||.+.+++.||+||+.+.+.++
T Consensus 27 ~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~---~~~--~~~kT~v~~~t~nP~wne~f~f~v~ 101 (152)
T 1rsy_A 27 KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP---DKK--KKFETKVHRKTLNPVFNEQFTFKVP 101 (152)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEET---TCC--SCEECCCCTTCSSCEEEEEEEECCC
T ss_pred CceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEc---CCC--ceEeccccCCCCCCcCcccEEEeec
Confidence 35777777766442 11 23479999998842 222 4688999999999999998888877
Q ss_pred CCCCCCCCCceEEEEecC
Q 004056 453 SEKSPKVADNFEPINIEG 470 (776)
Q Consensus 453 ~~~~~~~~d~~~vi~~~G 470 (776)
..+.......+.+++.+.
T Consensus 102 ~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 102 YSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp HHHHTTCEEEEEEEECCS
T ss_pred HHHcCCCEEEEEEEECCC
Confidence 555455667788888874
No 66
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=96.94 E-value=0.00082 Score=62.83 Aligned_cols=58 Identities=9% Similarity=-0.036 Sum_probs=44.9
Q ss_pred cCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC
Q 004056 408 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 408 ~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G 470 (776)
.+|||+++++. ..++ +++||.+.+++.||+||+.+.+.++..+.......+.+++.+.
T Consensus 54 ~~dpyv~v~l~---~~~~--~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 54 TSDPYVKVFLL---PDKK--KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp CCCEEEEEEEE---SCCS--CCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CcCcEEEEEEE---CCCC--ccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 57999999883 2222 4789999999999999998888877655555667788888874
No 67
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=96.66 E-value=0.0014 Score=61.01 Aligned_cols=61 Identities=16% Similarity=0.067 Sum_probs=48.3
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEeccccc-CCCCCCCCCCCceEEEEecC
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSS-VSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~-Lp~~~~~~~~d~~~vi~~~G 470 (776)
..+|||+++++. ..++...++||.+.+++.||+||+.+.+. ++..+.......+.+++.+.
T Consensus 38 g~~DPyv~v~l~---~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~ 99 (134)
T 2b3r_A 38 ADPNPYVKTYLL---PDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAES 99 (134)
T ss_dssp CCCCEEEEEEEE---SCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCS
T ss_pred CCCCeEEEEEEE---cCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCC
Confidence 467999999984 34445677899999999999999988887 76655556677888888873
No 68
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.50 E-value=0.00062 Score=64.06 Aligned_cols=57 Identities=7% Similarity=0.053 Sum_probs=43.2
Q ss_pred cCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 408 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 408 ~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
.+|||+++++.. .++ .++||.+++++.||+||+.+.+.++..+.......+.+++.+
T Consensus 53 ~~dpyv~v~l~~---~~~--~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 109 (147)
T 2enp_A 53 HSNPYVKICLLP---DQK--NSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFD 109 (147)
T ss_dssp CCCCEEEEEEET---CCS--SCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCS
T ss_pred CCCcEEEEEEEe---CCC--cceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECC
Confidence 579999998842 222 467999999999999999888887654444445677888876
No 69
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.31 E-value=0.0014 Score=60.98 Aligned_cols=64 Identities=11% Similarity=0.016 Sum_probs=45.5
Q ss_pred ccCCCcccccccccCC------CCcccccccceeecCCCceEEEeccccc-CCCCCCCCCCCceEEEEecC
Q 004056 407 GVDSPCDGGTLNKEGM------GNKEDQSNKEDIRESFANETTDKGSFSS-VSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~------~gkrlkKKKT~vkk~t~nP~~n~~~a~~-Lp~~~~~~~~d~~~vi~~~G 470 (776)
..+|||+++++..... ++.+..++||.+.+++.||+||+.+.+. ++.++.......+.+++.+.
T Consensus 37 g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~ 107 (142)
T 1rh8_A 37 GYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR 107 (142)
T ss_dssp SCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECS
T ss_pred CCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCC
Confidence 4579999998842200 0112356899999999999999988876 66555455667888888874
No 70
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=96.19 E-value=0.0044 Score=57.04 Aligned_cols=59 Identities=14% Similarity=0.059 Sum_probs=43.6
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
..+|||+++.+. ..++...++||.+.+++.||+||+.+.+.+...+. .....+.+++.+
T Consensus 35 ~~~dpyv~v~~~---~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~-~~~l~i~v~d~d 93 (137)
T 3rdl_A 35 GLSDPYVKLKLI---PDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDK-DRRLSVEIWDWD 93 (137)
T ss_dssp SCCCEEEEEEEE---CCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGG-GCEEEEEEEECC
T ss_pred CCCCeeEEEEEE---cCCCCCeeecCceEcCCCCCCcccEEEEEcCchhc-CCEEEEEEEECC
Confidence 357999999883 33445567899999999999999988887754333 234667778776
No 71
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.94 E-value=0.0019 Score=60.24 Aligned_cols=59 Identities=12% Similarity=0.054 Sum_probs=42.8
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccC-CCCCCCCCCCceEEEEecC
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSV-SSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~L-p~~~~~~~~d~~~vi~~~G 470 (776)
..+|||+++++.. .++ .++||.+.+++.||+||+.+.+.+ +.++.......+.+++.+.
T Consensus 45 g~~dpyv~v~~~~---~~~--~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 104 (141)
T 2d8k_A 45 GTSDPFVKIYLLP---DKK--HKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR 104 (141)
T ss_dssp SCCCEEEEEEEES---CCS--SEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS
T ss_pred CCCCcEEEEEEEC---CCC--ccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC
Confidence 3579999998842 122 467899999999999999888774 4444445566788888873
No 72
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=95.90 E-value=0.0051 Score=59.63 Aligned_cols=57 Identities=9% Similarity=-0.095 Sum_probs=43.9
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEE-Eec
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPI-NIE 469 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi-~~~ 469 (776)
..+|||+++++. ..+++..++||.+++++.||+||+.+.+.++.. .....+.++ +.+
T Consensus 50 g~~DPyv~v~l~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~~L~~~V~~d~d 107 (171)
T 2q3x_A 50 STPAPYVKVYLL---ENGACIAKKKTRIARKTLDPLYQQSLVFDESPQ---GKVLQVIVWGDYG 107 (171)
T ss_dssp CCCEEEEEEEEE---ETTEEEEEEECCCCCSCSSCEEEEEEECSSCCT---TEEEEEEEEEECS
T ss_pred CCCCceEEEEEE---CCCccccceeCccCCCCCCCCCCcEEEEEecCC---CCEEEEEEEEcCC
Confidence 457999999984 345555688999999999999999888887532 345677778 776
No 73
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=95.82 E-value=0.0063 Score=57.27 Aligned_cols=60 Identities=12% Similarity=0.004 Sum_probs=44.5
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G 470 (776)
..+|||+++++. ..++...++||.+.+++.||+||+.+.+.+...+. .....+.+++.+.
T Consensus 50 g~~dpyv~v~~~---~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~L~i~V~d~d~ 109 (149)
T 1a25_A 50 GLSDPYVKLKLI---PDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDK-DRRLSVEIWDWDL 109 (149)
T ss_dssp SCCCEEEEEEEE---SCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGG-GCEEEEEEEECCS
T ss_pred CCcCeEEEEEEE---CCCCCcceEecceeCCCCCCcCCcEEEEEeccccC-CCEEEEEEEECCC
Confidence 457999999984 23444567899999999999999988888764332 2346777888763
No 74
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=94.52 E-value=0.06 Score=48.66 Aligned_cols=57 Identities=5% Similarity=-0.052 Sum_probs=42.0
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G 470 (776)
...|||+++.+. +....++||.+.+++.||+||+.+.+.+.... .....+.+++.+.
T Consensus 25 g~~dpyv~v~~~-----~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 25 DTPDPYVELFIS-----TTPDSRKRTRHFNNDINPVWNETFEFILDPNQ--ENVLEITLMDANY 81 (126)
T ss_dssp CCCCEEEEEECT-----TSTTCCEECCCCTTCSSCEEEEEEEEEECTTS--CCEEEEEEEECCS
T ss_pred CCCCCEEEEEEc-----cCCCceEEccccCCCCCCcccceEEEEecCCC--CCEEEEEEEECCC
Confidence 457999999883 21235789999999999999998888774332 3456777888763
No 75
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.48 E-value=0.055 Score=49.93 Aligned_cols=71 Identities=10% Similarity=0.002 Sum_probs=49.6
Q ss_pred CceEEEEEEEEEec----CCCccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCC-CCCCCceE
Q 004056 390 KIGRLHLAITVLEE----SAKGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKS-PKVADNFE 464 (776)
Q Consensus 390 ~~GeI~LsL~~~~~----~~k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~-~~~~d~~~ 464 (776)
..|.|++.+.--.. .. ...|||+++.+. + .++||.+.+++.||+||+.+.+.+..... ......+.
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~-----~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~ 75 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK-----D---EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGII 75 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS-----S---CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEE
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC-----C---EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEE
Confidence 35777666532211 22 568999999883 2 25899999999999999998888765433 34556777
Q ss_pred EEEec
Q 004056 465 PINIE 469 (776)
Q Consensus 465 vi~~~ 469 (776)
+++.+
T Consensus 76 V~d~d 80 (140)
T 2dmh_A 76 VKDFE 80 (140)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 88876
No 76
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=93.73 E-value=0.1 Score=48.31 Aligned_cols=102 Identities=13% Similarity=0.030 Sum_probs=50.4
Q ss_pred eEEEEEEEEEec-CCCccCCCcccccccccCCCCcccccccce-eecCCCceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 392 GRLHLAITVLEE-SAKGVDSPCDGGTLNKEGMGNKEDQSNKED-IRESFANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 392 GeI~LsL~~~~~-~~k~~~dP~vkv~L~~e~~~gkrlkKKKT~-vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
|.|++.+.--.. .....+|||+++.. .+.||. +++++.||+||+.+.+.++.. .....+.++|.+
T Consensus 5 ~~L~V~V~~A~~l~~~g~~DPYv~v~~----------~~~kt~~~~~~t~nP~WnE~f~f~v~~~---~~~L~~~V~D~d 71 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGAQEKFNTYVTLKV----------QNVKSTTIAVRGSQPSWEQDFMFEINRL---DLGLTVEVWNKG 71 (131)
T ss_dssp EEEEEEEEEEECSSCGGGCEEEEEEEE----------TTEEEECCCEESSSCEEEEEEEEEECCC---SSEEEEEEEECC
T ss_pred eEEEEEEEEeECCCCCCCcCeEEEEEe----------cCEEEeEecCCCCCceECCEEEEEEeCC---CCeEEEEEEECC
Confidence 555554432111 12356899999862 123343 345789999999988887632 234677888876
Q ss_pred Ceeee--eEE-Ee-----cCCcccccccccccCCCCCccceEeec
Q 004056 470 GQQET--GIW-VH-----QPGSEVAQTWEPRKGKNRRLDTLVRRV 506 (776)
Q Consensus 470 G~~~~--gv~-~~-----~pg~~~~~~W~~~~~~~r~~~~q~~~~ 506 (776)
...+. |-. +. ..+.+...+|.++.-+.++++.++.++
T Consensus 72 ~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~ 116 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGT 116 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CC
T ss_pred CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcce
Confidence 22222 433 21 222222246776665555555444444
No 77
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=93.68 E-value=0.074 Score=48.67 Aligned_cols=68 Identities=12% Similarity=0.051 Sum_probs=46.6
Q ss_pred EEEEEEEEEec-CC-----CccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEE
Q 004056 393 RLHLAITVLEE-SA-----KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPI 466 (776)
Q Consensus 393 eI~LsL~~~~~-~~-----k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi 466 (776)
.+.|.+++..+ ++ ...+|||+++++... + .++||.+.+++.||+||+.+.+.+...+ ...+.++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~---~---~~~kT~v~~~t~nP~wne~f~f~v~~~~----~l~~~v~ 73 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS---G---QCHSTDTVKNTLDPKWNQHYDLYVGKTD----SITISVW 73 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT---C---CEEECCCCSSCSSCEEEEEEEEEEETTC----CEEEEEE
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC---C---ceEECCccCCCCCCCccCEEEEEeCCCC----EEEEEEE
Confidence 34556665655 22 235799999988321 1 4689999999999999998777664322 3677788
Q ss_pred EecC
Q 004056 467 NIEG 470 (776)
Q Consensus 467 ~~~G 470 (776)
+.+.
T Consensus 74 d~d~ 77 (132)
T 3pyc_A 74 NHKK 77 (132)
T ss_dssp EGGG
T ss_pred ECCC
Confidence 8763
No 78
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=93.57 E-value=0.09 Score=50.79 Aligned_cols=75 Identities=12% Similarity=-0.014 Sum_probs=50.1
Q ss_pred CceEEEEEEEEEec----CCCccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEE
Q 004056 390 KIGRLHLAITVLEE----SAKGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEP 465 (776)
Q Consensus 390 ~~GeI~LsL~~~~~----~~k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~v 465 (776)
..|.|++.+.--.. .....+|||+++.+.. ..++...++||.+.+++.||+||+.+.+.+.... ....+.+
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~--~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~---~~L~~~V 80 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYD--PMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQR---HRILFEV 80 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEE--TTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTT---CEEEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEEC--CCCCcccceeCceECCCCCCcccceEEEEEcCCC---CEEEEEE
Confidence 46777666532111 1224689999998842 2333446789999999999999998888776322 3456777
Q ss_pred EEec
Q 004056 466 INIE 469 (776)
Q Consensus 466 i~~~ 469 (776)
++.+
T Consensus 81 ~d~d 84 (176)
T 3m7f_B 81 FDEN 84 (176)
T ss_dssp EECC
T ss_pred EECC
Confidence 7765
No 79
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=92.85 E-value=0.059 Score=51.99 Aligned_cols=52 Identities=6% Similarity=0.024 Sum_probs=38.1
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
..+|||+++.+. +. +..||.+++++.||+||+.+.+.++. .....+.+++.+
T Consensus 58 g~sDPYv~v~l~-----~~--~~~kT~v~~ktlnP~WNE~F~f~v~~----~~~L~~~V~D~d 109 (157)
T 2fk9_A 58 QLLDPYLTVSVD-----QV--RVGQTSTKQKTNKPTYNEEFCANVTD----GGHLELAVFHET 109 (157)
T ss_dssp CCCCEEEEEEET-----TE--EEEECCCCSSCSSCEEEEEEEEEEEE----ECEEEEEEEECC
T ss_pred CCCCeEEEEEEC-----CE--eeEEeeecCCCCCCccCcEEEEEcCC----CCEEEEEEEECC
Confidence 357999999873 22 23578889999999999998887642 234567777765
No 80
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=92.45 E-value=0.1 Score=49.78 Aligned_cols=68 Identities=15% Similarity=0.029 Sum_probs=53.1
Q ss_pred EEEEEEEEec-CCCccCCCcccccccccCCCCcccccccceeec-CCCceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 394 LHLAITVLEE-SAKGVDSPCDGGTLNKEGMGNKEDQSNKEDIRE-SFANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 394 I~LsL~~~~~-~~k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk-~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
.-|++++..+ ++....||+++++... .|+||.+.+ +..||+||+.+-.++...........+++.+++
T Consensus 21 msL~V~l~~a~~Lpg~~Dp~akv~FRg--------~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 21 MALIVHLKTVSELRGRADRIAKVTFRG--------QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp EEEEEEEEEEESCCSCEEEEEEEEETT--------EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred EEEEEEEEEecCCCCCCCCeEEEEEec--------cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 3344444544 5667899999998832 478898887 799999999999998877777778889999987
No 81
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=92.24 E-value=0.18 Score=46.97 Aligned_cols=69 Identities=4% Similarity=0.056 Sum_probs=46.9
Q ss_pred ceEEEEEEEEEec----CCCccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEE
Q 004056 391 IGRLHLAITVLEE----SAKGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPI 466 (776)
Q Consensus 391 ~GeI~LsL~~~~~----~~k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi 466 (776)
.|.|++.+.--.. .....+|||+++.+. + .++||.+.+++.||+||+.+.+.+.... ....+.++
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~-----~---~~~kT~~~~~t~nP~Wne~f~f~v~~~~---~~l~~~v~ 84 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVG-----K---TKKRTKTIYGNLNPVWEENFHFECHNSS---DRIKVRVL 84 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-----T---EEEECCCCCSCSSCEEEEEEEEEECSTT---CEEEEEEE
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC-----C---EEEECCccCCCCCCCcccEEEEEecCCC---CEEEEEEE
Confidence 5777666532111 223468999999872 1 3578999999999999998877765332 34567777
Q ss_pred EecC
Q 004056 467 NIEG 470 (776)
Q Consensus 467 ~~~G 470 (776)
+.+.
T Consensus 85 d~d~ 88 (148)
T 3kwu_A 85 DEDD 88 (148)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 7764
No 82
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=92.22 E-value=0.083 Score=48.73 Aligned_cols=50 Identities=4% Similarity=-0.003 Sum_probs=37.6
Q ss_pred CCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 409 DSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 409 ~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
+|||+++.+. +. +..||.+++++.||+||+.+.+.++.. ....+.+++.+
T Consensus 38 ~DPyv~v~l~-----~~--~~~~T~~~~~t~nP~WnE~f~f~v~~~----~~L~~~V~d~d 87 (136)
T 1gmi_A 38 LDPYIALNVD-----DS--RIGQTATKQKTNSPAWHDEFVTDVCNG----RKIELAVFHDA 87 (136)
T ss_dssp CCEEEEEEET-----TE--EEEECCCCSSCSSCEEEEEEEEEEEEE----CEEEEEEEECC
T ss_pred cCcEEEEEEC-----Ce--EeeeeeEECCCcCCccCCEEEEEecCC----CEEEEEEEeCC
Confidence 8999999873 22 345788889999999999888876532 45567777776
No 83
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.63 E-value=0.16 Score=46.51 Aligned_cols=70 Identities=13% Similarity=0.056 Sum_probs=47.9
Q ss_pred CceEEEEEEEEEec----CCCccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEE
Q 004056 390 KIGRLHLAITVLEE----SAKGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEP 465 (776)
Q Consensus 390 ~~GeI~LsL~~~~~----~~k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~v 465 (776)
..|.|++.+.--.. .....+|||+++.+. + .+.||.+.+++.||+||+.+.+.+... .....+.+
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~-----~---~~~kT~~~~~t~nP~wne~f~f~~~~~---~~~l~i~V 79 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELG-----N---DRLQTHTVYKNLNPEWNKVFTFPIKDI---HDVLEVTV 79 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET-----T---EEEECCCCSSCSSCCCCEEEEEEESCT---TCEEEEEE
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC-----C---EEEEeeeecCCCCCccccEEEEEecCC---CCEEEEEE
Confidence 36777776632211 223468999999873 2 257899999999999999888877532 24467777
Q ss_pred EEecC
Q 004056 466 INIEG 470 (776)
Q Consensus 466 i~~~G 470 (776)
++.+.
T Consensus 80 ~d~d~ 84 (133)
T 2ep6_A 80 FDEDG 84 (133)
T ss_dssp EEEET
T ss_pred EECCC
Confidence 87764
No 84
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=90.99 E-value=0.21 Score=45.70 Aligned_cols=68 Identities=13% Similarity=0.043 Sum_probs=44.4
Q ss_pred ceEEEEEEEEEe-c---CCCccCCCcccccccccCCCCcccccccceeec-CCCceEEEecccccCCCCCCCCCCCceEE
Q 004056 391 IGRLHLAITVLE-E---SAKGVDSPCDGGTLNKEGMGNKEDQSNKEDIRE-SFANETTDKGSFSSVSSEKSPKVADNFEP 465 (776)
Q Consensus 391 ~GeI~LsL~~~~-~---~~k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk-~t~nP~~n~~~a~~Lp~~~~~~~~d~~~v 465 (776)
.|.|++.+.--. . ......|||+++.+. + .+.||.+.+ ++.||+||+.+.+.+.. ......+.+
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~-----~---~~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V 77 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCR-----T---QDQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKI 77 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSSCSSCCCEEEESS-----S---CEEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEE
T ss_pred cEEEEEEEEeccCCCCcccCCCcCceEEEEEC-----C---ccceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEE
Confidence 577766652211 1 122468999999873 2 146888888 89999999988887653 333455666
Q ss_pred EEec
Q 004056 466 INIE 469 (776)
Q Consensus 466 i~~~ 469 (776)
++.+
T Consensus 78 ~d~~ 81 (136)
T 1wfj_A 78 FDKD 81 (136)
T ss_dssp CCSS
T ss_pred EECC
Confidence 6665
No 85
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=90.99 E-value=0.13 Score=48.14 Aligned_cols=74 Identities=14% Similarity=0.038 Sum_probs=48.5
Q ss_pred CceEEEEEEEEEec-CC-----CccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCce
Q 004056 390 KIGRLHLAITVLEE-SA-----KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNF 463 (776)
Q Consensus 390 ~~GeI~LsL~~~~~-~~-----k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~ 463 (776)
..|.|++.+ ..+ ++ ...+|||+++.+.. ...+...++||.+.+++.||+||+.+.+.+... .....+
T Consensus 18 ~~~~L~V~v--~~a~~L~~~d~~g~~dpyv~v~~~~--~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~~l~~ 90 (153)
T 3b7y_A 18 NSRIVRVRV--IAGIGLAKKDILGASDPYVRVTLYD--PMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ---QHRLLF 90 (153)
T ss_dssp TCEEEEEEE--EEEESCC-------CCEEEEEEEEE--TTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT---TCEEEE
T ss_pred CccEEEEEE--EEeeCCCCCCCCCCCCcEEEEEEEC--CCCccceeeeCccccCCCCCCCCCEEEEEecCC---CCEEEE
Confidence 467766655 333 22 24679999998842 122234678999999999999999888776542 234567
Q ss_pred EEEEecC
Q 004056 464 EPINIEG 470 (776)
Q Consensus 464 ~vi~~~G 470 (776)
.+++.+.
T Consensus 91 ~V~d~d~ 97 (153)
T 3b7y_A 91 EVFDENR 97 (153)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 7888763
No 86
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=90.86 E-value=0.18 Score=49.05 Aligned_cols=50 Identities=18% Similarity=0.088 Sum_probs=39.3
Q ss_pred cCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 408 VDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 408 ~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
.+|||+++++. + .++||.+.+++.||+||+.+.+.+. ......+.++|.+
T Consensus 56 ~sDPYv~v~~~-----~---~~~kT~v~~~tlnP~Wne~f~f~v~----~~~~L~~~V~D~d 105 (173)
T 2nq3_A 56 GPSPYVEVTVD-----G---QSKKTEKCNNTNSPKWKQPLTVIVT----PVSKLHFRVWSHQ 105 (173)
T ss_dssp CCCEEEEEEET-----T---EEEECCCCSSCSSCEEEEEEEEEEC----TTCEEEEEEEECC
T ss_pred CCCeEEEEEEC-----C---EEeEccccCCCCCCeECCEEEEEeC----CCCEEEEEEEECC
Confidence 38999999873 2 4689999999999999998888763 2445677888876
No 87
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=89.33 E-value=0.3 Score=47.36 Aligned_cols=50 Identities=6% Similarity=-0.126 Sum_probs=34.8
Q ss_pred ccCCCcccccccccCCCCcccccccceee-cCCCceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIR-ESFANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vk-k~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
...|||+++.. .+.||.+. +++.||+||+.+.+.+... .....+.++|.+
T Consensus 30 g~~DPYV~v~~----------~~~kt~~~~~~t~nP~WnE~f~f~v~~~---~~~L~~~V~D~d 80 (167)
T 2cjs_A 30 EKFNTYVTLKV----------QNVESTTIAVRGSQPSWEQDFMFEINRL---DLGLTVEVWNKG 80 (167)
T ss_dssp GGCEEEEEEEE----------TTEEEECCCEESSSCEEEEEEEEECCCT---TSEEEEEEEECC
T ss_pred CCCCeEEEEEe----------cceEEEEecCCCCCCCCCCEEEEEeeCC---CCEEEEEEEECC
Confidence 46799999862 12344444 4689999999988887632 234677888876
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=84.07 E-value=1.3 Score=52.04 Aligned_cols=60 Identities=13% Similarity=0.016 Sum_probs=45.6
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G 470 (776)
..+|||+++.+. ..++...++||.+.+++.||+||+.+.+.+...+. .....+.+++.+.
T Consensus 191 g~sDPyvkv~l~---p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~-~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 191 GLSDPYVKLKLI---PDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDK-DRRLSVEIWDWDL 250 (674)
T ss_dssp SSCCEEEEEEEE---SCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTT-TCEEEEEEEECCS
T ss_pred cccCcccccccc---cCccccccccccccccccCCCccceeeeecccCCc-cceeeeEEeeccc
Confidence 468999999983 34555667899999999999999988887765443 2346778888773
No 89
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=83.58 E-value=7.3 Score=39.54 Aligned_cols=56 Identities=13% Similarity=0.290 Sum_probs=42.2
Q ss_pred eEEEeeeecCCCCCcceeeEEEeeccCC-CCCEEEEEEeecCCC----C-CCceeEEEEecC
Q 004056 317 YRFRTKTQRKTLSPKWHEEFNIPISTWD-SPNVLVIEVRDKDHF----V-DDTLGDCTINIS 372 (776)
Q Consensus 317 ~~~kTkvikkTlNP~WnEtF~f~V~~~e-~~~~L~V~VyD~D~~----~-Dd~LG~v~I~L~ 372 (776)
..++|-|...+.+|.|+|++.+.++... ....|.|++|+.... + ...+|.+.+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 4678889998999999999999998543 234799999986543 1 346677777764
No 90
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=81.76 E-value=1.5 Score=52.22 Aligned_cols=97 Identities=6% Similarity=-0.054 Sum_probs=61.5
Q ss_pred CceEEEEEEEEEec-CCC--------ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCC
Q 004056 390 KIGRLHLAITVLEE-SAK--------GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVA 460 (776)
Q Consensus 390 ~~GeI~LsL~~~~~-~~k--------~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~ 460 (776)
..|.|++.+ ..+ ++. ..+|||+++.+. +....++||.+++++.||+||+.+.+.+... ....
T Consensus 16 ~~g~L~V~V--i~A~nL~~~~~~D~~g~sDPYV~V~l~-----~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~--~~~~ 86 (749)
T 1cjy_A 16 YSHKFTVVV--LRATKVTKGAFGDMLDTPDPYVELFIS-----TTPDSRKRTRHFNNDINPVWNETFEFILDPN--QENV 86 (749)
T ss_dssp CCEEEEEEE--EEEECCCSCHHHHHHCCCCEEEEEECT-----TSTTCCEECCCCTTCSSCEEEEEEEEEECTT--SCCB
T ss_pred CccEEEEEE--EEEECCCCccccCCCCCcCeEEEEEEe-----cCCCCeEecceEcCCCCCeeeeEEEEEecCC--CCCE
Confidence 457766665 332 222 358999999873 2223678999999999999999888877543 3346
Q ss_pred CceEEEEecCeeee--eEE-Ee--c-CCcccccccccccCC
Q 004056 461 DNFEPINIEGQQET--GIW-VH--Q-PGSEVAQTWEPRKGK 495 (776)
Q Consensus 461 d~~~vi~~~G~~~~--gv~-~~--~-pg~~~~~~W~~~~~~ 495 (776)
..+.+++.+..... |-. +. . ..+....+|.++.+.
T Consensus 87 L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 87 LEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp CEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred EEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 78888888732222 443 11 1 222334778877654
No 91
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=81.50 E-value=4.3 Score=49.59 Aligned_cols=101 Identities=17% Similarity=0.212 Sum_probs=67.1
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCcEEEEEe--CC----eEEEeeeecCCCCCcceeeEEEeec--cCCCCCEEEEEEee
Q 004056 284 VAYARVEVVEASDMKPSDLNGLADPYVKGQL--GP----YRFRTKTQRKTLSPKWHEEFNIPIS--TWDSPNVLVIEVRD 355 (776)
Q Consensus 284 ~GvL~V~VieA~~L~~~D~~G~sDPYVkv~L--g~----~~~kTkvikkTlNP~WnEtF~f~V~--~~e~~~~L~V~VyD 355 (776)
...+.|+|..+.++... ...+-||.+.+ |. ....|..+.-..+|.|||...|++. +.+....|.|.||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 36799999999998754 34677888766 44 2345555555678999998888765 44455689999999
Q ss_pred cCCC-------------CCCceeEEEEecCcccCCCccceeeecCCCCceEEEEEE
Q 004056 356 KDHF-------------VDDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHLAI 398 (776)
Q Consensus 356 ~D~~-------------~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~GeI~LsL 398 (776)
.... .+..||.+.++|-+... .| ..|...+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~--------~l---~~G~~~l~l 337 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYKD--------QL---KTGERCLYM 337 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTTS--------BB---CCEEEEEEC
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCcC--------cc---ccCCEEEEE
Confidence 6331 13488888888876442 11 257776666
No 92
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=80.95 E-value=1.3 Score=50.87 Aligned_cols=76 Identities=8% Similarity=-0.152 Sum_probs=48.3
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecCeee--e-eEEEecCCc
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEGQQE--T-GIWVHQPGS 483 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G~~~--~-gv~~~~pg~ 483 (776)
..+|||+++.+. + .+.||.+.++++||+||+.+.+.+... ....+..+.++|.|.... - |...-....
T Consensus 412 g~sDPYV~v~l~-----~---~~~kTkvik~tlNP~Wne~f~f~~~~~-~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~~ 482 (540)
T 3nsj_A 412 TATDAYLKVFFG-----G---QEFRTGVVWNNNNPRWTDKMDFENVLL-STGGPLRVQVWDADYGWDDDLLGSCDRSPHS 482 (540)
T ss_dssp SCCCEEEEEEET-----T---EEEECCCBCSCSSCBCCCCEEEEEEET-TTCCCEEEEEEECCSSSCCEEEEEEEECCCS
T ss_pred CCcCeEEEEEEC-----C---EeeeeeeecCCCCCCCCeEEEEEEecC-CCCCEEEEEEEECCCCCCCCEEEEEEEEeeC
Confidence 357999999882 2 248999999999999999777653211 134566788999884322 2 544222223
Q ss_pred cccccccc
Q 004056 484 EVAQTWEP 491 (776)
Q Consensus 484 ~~~~~W~~ 491 (776)
+....|-+
T Consensus 483 g~~~~~~~ 490 (540)
T 3nsj_A 483 GFHEVTCE 490 (540)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 33456654
No 93
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=78.87 E-value=2.1 Score=47.89 Aligned_cols=54 Identities=9% Similarity=-0.038 Sum_probs=40.1
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCCCceEEEecccccCCCCCCCCCCCceEEEEecC
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESFANETTDKGSFSSVSSEKSPKVADNFEPINIEG 470 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~G 470 (776)
..+|||+++.+. + .+.||.+.+++.||+||+.+.+.+... ......+.++|.+.
T Consensus 406 ~~sdpyv~v~~~-----~---~~~~T~~~~~t~nP~w~e~f~f~~~~~--~~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 406 GKSNPYCEISMG-----S---QSYTTRTIQDTLNPKWNFNCQFFIKDL--YQDVLCLTLFDRDQ 459 (510)
T ss_dssp SCCCEEEEEEET-----T---EEEECCCCSSCSSCEEEEEEEEEESCT--TTCEEEEEEEECCS
T ss_pred CCCCeEEEEEEC-----C---eeccCCccCCCCCCccCceEEEEecCC--CCCEEEEEEEeCCC
Confidence 468999999872 1 368999999999999999877766422 23345678888773
No 94
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=76.29 E-value=1.7 Score=50.67 Aligned_cols=58 Identities=10% Similarity=-0.027 Sum_probs=41.2
Q ss_pred ccCCCcccccccccCCCCcccccccceeecCC-CceEEEecccccCCCCCCCCCCCceEEEEec
Q 004056 407 GVDSPCDGGTLNKEGMGNKEDQSNKEDIRESF-ANETTDKGSFSSVSSEKSPKVADNFEPINIE 469 (776)
Q Consensus 407 ~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t-~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~~~ 469 (776)
...||||++.+.. ......++||.+.+++ .||+||+.+.+.+...+. ....+.|++.+
T Consensus 518 ~~~DPYV~V~l~g---~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el--~~L~~~V~D~D 576 (624)
T 1djx_A 518 SIVDPKVIVEIHG---VGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDL--ALVRFMVEDYD 576 (624)
T ss_dssp SCCCEEEEEEEES---SGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGG--CEEEEEEEECC
T ss_pred CCCCcEEEEEEec---CCCCcceeecccccCCCCCCccCceEEEEEecCCC--CEEEEEEEEcC
Confidence 4689999998831 1122346789988887 999999988777654332 34567788876
No 95
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=75.97 E-value=11 Score=46.50 Aligned_cols=102 Identities=20% Similarity=0.271 Sum_probs=68.0
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCcEEEEEe--CC----eEEEeeeecCCCCCcceeeEEEeec--cCCCCCEEEEEEee
Q 004056 284 VAYARVEVVEASDMKPSDLNGLADPYVKGQL--GP----YRFRTKTQRKTLSPKWHEEFNIPIS--TWDSPNVLVIEVRD 355 (776)
Q Consensus 284 ~GvL~V~VieA~~L~~~D~~G~sDPYVkv~L--g~----~~~kTkvikkTlNP~WnEtF~f~V~--~~e~~~~L~V~VyD 355 (776)
...++|+|..+.++.... ....+-||.+.+ |. ...+|+.+. ..+|.|||...|.+. +.+....|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 357899999999886432 334577888776 43 334454433 457889998888765 44455689999999
Q ss_pred cCCC-----CCCceeEEEEecCcccCCCccceeeecCCCCceEEEEEE
Q 004056 356 KDHF-----VDDTLGDCTINISDLRDGQRHDMWIPLQNIKIGRLHLAI 398 (776)
Q Consensus 356 ~D~~-----~Dd~LG~v~I~L~~L~~~~~~~~W~~L~~~~~GeI~LsL 398 (776)
.... .+..||.+.++|-+... .| ..|...+.+
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~~--------~L---~~G~~~L~l 468 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYTD--------TL---VSGKMALNL 468 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTTC--------BB---CCEEEEEEC
T ss_pred ecCccCcccccceeEEeeeeeEccCC--------eE---EcCCeEEEe
Confidence 7653 14579999999886542 11 257776666
No 96
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=65.76 E-value=3.7 Score=49.32 Aligned_cols=73 Identities=4% Similarity=-0.073 Sum_probs=43.8
Q ss_pred ceEEEEEEEEEec-CC-CccCCCcccccccccCCCCcccccccce-eec-CCCceEEEe-cccc-cCCCCCCCCCCCceE
Q 004056 391 IGRLHLAITVLEE-SA-KGVDSPCDGGTLNKEGMGNKEDQSNKED-IRE-SFANETTDK-GSFS-SVSSEKSPKVADNFE 464 (776)
Q Consensus 391 ~GeI~LsL~~~~~-~~-k~~~dP~vkv~L~~e~~~gkrlkKKKT~-vkk-~t~nP~~n~-~~a~-~Lp~~~~~~~~d~~~ 464 (776)
.|.|.+.+ ..+ ++ ....||||++.+.. ......+|+||. +.+ ++.||+||+ .+.+ .++..+.. ...++
T Consensus 677 ~~~L~V~V--isa~~L~~~~~DPYV~V~l~g--~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~--~Lr~~ 750 (799)
T 2zkm_X 677 ATTLSITV--ISGQFLSERSVRTYVEVELFG--LPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELA--SLRVA 750 (799)
T ss_dssp CEEEEEEE--EEEESCCSSCCCEEEEEEEEC--CTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGC--EEEEE
T ss_pred eeeEEEEE--EeccccCccCCCcEEEEEEEe--cCCCcccceeecccccCCCCCCeeecceEEEEEEccCCcc--EEEEE
Confidence 45655544 443 22 24689999999842 122222356787 555 569999998 4666 56444433 45677
Q ss_pred EEEec
Q 004056 465 PINIE 469 (776)
Q Consensus 465 vi~~~ 469 (776)
|.+.+
T Consensus 751 V~D~d 755 (799)
T 2zkm_X 751 VMEEG 755 (799)
T ss_dssp EEETT
T ss_pred EEEeC
Confidence 77765
No 97
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=62.39 E-value=27 Score=33.54 Aligned_cols=120 Identities=12% Similarity=0.118 Sum_probs=77.9
Q ss_pred cCceeEEEEEEEEecCCCCCC--CCCCCCcEEEEEe--CC-eEEEeeeecCCCCCcceeeEEEeeccCC------CCCEE
Q 004056 281 KEPVAYARVEVVEASDMKPSD--LNGLADPYVKGQL--GP-YRFRTKTQRKTLSPKWHEEFNIPISTWD------SPNVL 349 (776)
Q Consensus 281 ~~~~GvL~V~VieA~~L~~~D--~~G~sDPYVkv~L--g~-~~~kTkvikkTlNP~WnEtF~f~V~~~e------~~~~L 349 (776)
....+.+.|+|.++. +.+.. ..+..+|+.-+.+ -. +.+.|.++. .++|.+|-+-.+.|...+ ....|
T Consensus 14 ~~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 14 ERGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CSSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred cCCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 445688999999887 32211 1233467554444 33 556666665 889999998888875321 22368
Q ss_pred EEEEeecCCCCCCceeEEEEecCcccCCCc-cceeeecCC-----CCceEEEEEEEEEe
Q 004056 350 VIEVRDKDHFVDDTLGDCTINISDLRDGQR-HDMWIPLQN-----IKIGRLHLAITVLE 402 (776)
Q Consensus 350 ~V~VyD~D~~~Dd~LG~v~I~L~~L~~~~~-~~~W~~L~~-----~~~GeI~LsL~~~~ 402 (776)
.++++.........||.+.|+|.++...+. ...-.+|.+ ..-|.|.+.+++..
T Consensus 92 ~lELhqa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 92 TLEVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEEEeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 999988754447899999999999874432 333345543 24688888777654
No 98
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=59.59 E-value=8.2 Score=47.78 Aligned_cols=71 Identities=13% Similarity=0.146 Sum_probs=49.6
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCcEEEEEe--CCe----EEEeeeecCCCCCcceeeEEEeec--cCCCCCEEEEEEee
Q 004056 284 VAYARVEVVEASDMKPSDLNGLADPYVKGQL--GPY----RFRTKTQRKTLSPKWHEEFNIPIS--TWDSPNVLVIEVRD 355 (776)
Q Consensus 284 ~GvL~V~VieA~~L~~~D~~G~sDPYVkv~L--g~~----~~kTkvikkTlNP~WnEtF~f~V~--~~e~~~~L~V~VyD 355 (776)
...++|+|..+.++... ...+-||.+.+ |.+ ..+|+.+.-..+|.|||...|.+. +.+....|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 36799999999998754 34577777544 542 234555544678999998888765 33345689999999
Q ss_pred cC
Q 004056 356 KD 357 (776)
Q Consensus 356 ~D 357 (776)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 99
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=57.18 E-value=2.1 Score=48.30 Aligned_cols=61 Identities=5% Similarity=-0.165 Sum_probs=5.2
Q ss_pred EEEEEec-CCCccCCCcccccccccCCCCcccccccceeecCC---CceEEEecccccCCCCCCCCCCCceEEEE
Q 004056 397 AITVLEE-SAKGVDSPCDGGTLNKEGMGNKEDQSNKEDIRESF---ANETTDKGSFSSVSSEKSPKVADNFEPIN 467 (776)
Q Consensus 397 sL~~~~~-~~k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~t---~nP~~n~~~a~~Lp~~~~~~~~d~~~vi~ 467 (776)
.+.+..+ ++....|||+++.+. +. ++.||.+++++ .||+||+.+.+.+... .....+.+++
T Consensus 14 ~V~VieAk~L~~~ddpYv~v~l~-----~~--~~~kT~v~~kt~~glnP~WnE~F~f~~~~~---~~~L~v~V~d 78 (483)
T 3bxj_A 14 KLWIIEARELPPKKRYYCELCLD-----DM--LYARTTSKPRSASGDTVFWGEHFEFNNLPA---VRALRLHLYR 78 (483)
T ss_dssp ----------------------------------------------------CCEECC-----------------
T ss_pred EEEEEEcCCcCCCCCCeEEEEEC-----Ce--EEeeeeEEeCCCCCCCCccccEEEEecCCC---ccEEEEEEEe
Confidence 3334444 333344899998773 22 24689999999 9999999988874322 1344556665
No 100
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=54.59 E-value=39 Score=41.32 Aligned_cols=90 Identities=14% Similarity=0.096 Sum_probs=55.9
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCcEEEEEe--CCe---EEEeeeecCCCCCcceeeEEEeec--cCCCCCEEEEEEeecC
Q 004056 285 AYARVEVVEASDMKPSDLNGLADPYVKGQL--GPY---RFRTKTQRKTLSPKWHEEFNIPIS--TWDSPNVLVIEVRDKD 357 (776)
Q Consensus 285 GvL~V~VieA~~L~~~D~~G~sDPYVkv~L--g~~---~~kTkvikkTlNP~WnEtF~f~V~--~~e~~~~L~V~VyD~D 357 (776)
..++|.|+.+....-.. +..++-||.+.+ |.+ ..+|..+.-+.+|.|||.+.|.+. +.+....|.|+||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 46788888876422111 234567887655 552 234444444667999998887655 4445568999999853
Q ss_pred CC-----------------CCCceeEEEEecCccc
Q 004056 358 HF-----------------VDDTLGDCTINISDLR 375 (776)
Q Consensus 358 ~~-----------------~Dd~LG~v~I~L~~L~ 375 (776)
.. ....||.+.++|-+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 21 1347888888877654
No 101
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=51.30 E-value=8.1 Score=46.88 Aligned_cols=72 Identities=7% Similarity=-0.107 Sum_probs=43.6
Q ss_pred EEEEEEEEec-CC-CccCCCcccccccccCCCCcccccccceeecC-CCceEEEec-cccc-CCCCCCCCCCCceEEEEe
Q 004056 394 LHLAITVLEE-SA-KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRES-FANETTDKG-SFSS-VSSEKSPKVADNFEPINI 468 (776)
Q Consensus 394 I~LsL~~~~~-~~-k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~-t~nP~~n~~-~a~~-Lp~~~~~~~~d~~~vi~~ 468 (776)
..|.++++.+ ++ ....||||++.+.. .......|+||.+.++ +.||+||+. +.|. +...+. ....++|.|.
T Consensus 725 ~~L~V~Visaq~L~~~~~DPYV~V~l~g--~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pel--a~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDRKVGIYVEVDMFG--LPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL--ASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSSCCCEEEEEEEES--STTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGG--CEEEEEEEET
T ss_pred eEEEEEEEEeccCcccCCCcEEEEEEeC--CCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCc--CEEEEEEEcC
Confidence 3566666655 22 23579999998842 1112223568888776 599999984 6665 432222 2456777776
Q ss_pred c
Q 004056 469 E 469 (776)
Q Consensus 469 ~ 469 (776)
+
T Consensus 801 d 801 (885)
T 3ohm_B 801 G 801 (885)
T ss_dssp T
T ss_pred C
Confidence 5
No 102
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=44.28 E-value=9.9 Score=45.74 Aligned_cols=71 Identities=10% Similarity=-0.090 Sum_probs=40.8
Q ss_pred EEEEEEEec-CC-CccCCCcccccccccCCCCcccccccceeecC-CCceEEEec-cccc-CCCCCCCCCCCceEEEEe
Q 004056 395 HLAITVLEE-SA-KGVDSPCDGGTLNKEGMGNKEDQSNKEDIRES-FANETTDKG-SFSS-VSSEKSPKVADNFEPINI 468 (776)
Q Consensus 395 ~LsL~~~~~-~~-k~~~dP~vkv~L~~e~~~gkrlkKKKT~vkk~-t~nP~~n~~-~a~~-Lp~~~~~~~~d~~~vi~~ 468 (776)
.|++++..+ ++ ....||||++.+... ......+|+||.+.++ +.||+||+. +.+. +...+. ....++|.+.
T Consensus 651 ~L~V~Visaq~L~~~~~DPYV~V~l~g~-p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel--a~Lrf~V~D~ 726 (816)
T 3qr0_A 651 TIEIKIISAQFLSDKQISSYVEVEMYGL-PTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL--AVVRIIVSEE 726 (816)
T ss_dssp EEEEEEEEEECCCSSCCCEEEEEEEESS-GGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG--CEEEEEEEET
T ss_pred EEEEEEEEcccCCCCCCCCeEEEEEeCC-CcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc--cEEEEEEEec
Confidence 345555544 22 235899999988421 0111124578888775 599999987 6665 433332 2335566654
Done!