Query 004057
Match_columns 776
No_of_seqs 203 out of 1224
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 12:52:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004057.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004057hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 3E-128 1E-132 1177.2 71.2 716 30-776 70-837 (1045)
2 2wyh_A Alpha-mannosidase; hydr 100.0 8E-114 3E-118 1045.7 64.3 647 30-776 15-746 (923)
3 3lvt_A Glycosyl hydrolase, fam 100.0 1E-109 5E-114 1001.0 63.7 640 39-775 5-720 (899)
4 1o7d_A Lysosomal alpha-mannosi 100.0 2.5E-73 8.6E-78 597.8 31.1 293 29-322 2-297 (298)
5 1o7d_D Lysosomal alpha-mannosi 100.0 1.7E-37 5.9E-42 319.2 21.5 177 600-776 2-182 (282)
6 1o7d_C Lysosomal alpha-mannosi 100.0 7.4E-30 2.5E-34 245.6 17.6 150 399-581 2-151 (159)
7 1o7d_B Lysosomal alpha-mannosi 99.9 9.3E-22 3.2E-26 163.1 8.2 74 320-393 2-75 (84)
8 1k1x_A 4-alpha-glucanotransfer 99.8 1.6E-18 5.5E-23 200.7 31.5 145 39-198 2-147 (659)
9 3p0b_A TT1467 protein; glycosi 99.1 1.1E-09 3.8E-14 121.6 14.9 295 106-422 137-492 (540)
10 3n98_A Alpha-amylase, GH57 fam 99.0 2.1E-09 7.3E-14 119.8 14.5 90 105-196 115-220 (562)
11 2b5d_X Alpha-amylase; (beta/al 99.0 8.4E-08 2.9E-12 108.4 26.5 146 41-197 3-208 (528)
12 3rxz_A Polysaccharide deacetyl 96.5 0.27 9.3E-06 51.2 21.5 277 31-352 15-298 (300)
13 3s6o_A Polysaccharide deacetyl 95.9 0.69 2.4E-05 48.6 21.3 222 76-338 85-308 (321)
14 3cl6_A PUUE allantoinase; URIC 95.6 0.56 1.9E-05 49.0 18.9 107 77-197 81-189 (308)
15 3qbu_A Putative uncharacterize 95.4 1.4 4.7E-05 46.3 21.2 110 75-197 72-183 (326)
16 2cc0_A Acetyl-xylan esterase; 93.6 0.25 8.6E-06 47.9 9.5 101 79-192 19-121 (195)
17 2y8u_A Chitin deacetylase; hyd 92.9 0.41 1.4E-05 47.7 10.0 101 79-192 47-149 (230)
18 2vyo_A ECU11_0510, chitooligos 92.4 0.25 8.4E-06 50.2 7.7 101 80-192 42-149 (254)
19 2j13_A Polysaccharide deacetyl 91.8 0.62 2.1E-05 47.0 9.8 101 81-193 72-174 (247)
20 1ny1_A Probable polysaccharide 91.0 1 3.5E-05 45.1 10.4 99 81-192 60-161 (240)
21 2iw0_A Chitin deacetylase; hyd 90.2 0.62 2.1E-05 47.2 7.9 106 79-192 56-163 (254)
22 2c71_A Glycoside hydrolase, fa 80.3 3.9 0.00013 40.0 7.8 94 80-184 21-116 (216)
23 3vus_A Poly-beta-1,6-N-acetyl- 79.3 6 0.00021 40.1 9.1 82 114-198 126-235 (268)
24 4f9d_A Poly-beta-1,6-N-acetyl- 78.9 3.6 0.00012 46.9 7.8 82 114-198 130-239 (618)
25 2c1i_A Peptidoglycan glcnac de 77.1 5.1 0.00017 43.7 8.1 97 80-191 252-349 (431)
26 2w3z_A Putative deacetylase; P 70.5 8.3 0.00028 40.0 7.5 102 79-192 122-236 (311)
27 1u69_A Hypothetical protein; s 50.6 5.9 0.0002 36.9 1.8 18 166-183 106-124 (163)
28 4hd5_A Polysaccharide deacetyl 48.5 51 0.0017 34.7 8.7 80 113-198 246-326 (360)
29 3bs6_A Inner membrane protein 38.9 1.6E+02 0.0054 29.5 10.6 27 599-625 4-30 (280)
30 3blc_A Inner membrane protein 35.3 1.5E+02 0.0052 30.5 10.0 28 598-625 34-61 (330)
31 2og0_A Excisionase; protein-DN 29.6 53 0.0018 24.0 3.7 36 103-138 6-47 (52)
32 4esj_A Type-2 restriction enzy 24.1 66 0.0022 31.4 4.2 57 76-132 189-252 (257)
33 1tsj_A Conserved hypothetical 22.9 19 0.00063 32.3 0.1 16 166-181 111-126 (139)
34 3oms_A PHNB protein; structura 20.7 22 0.00074 31.9 0.1 15 166-180 120-134 (138)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=3.4e-128 Score=1177.17 Aligned_cols=716 Identities=27% Similarity=0.454 Sum_probs=596.0
Q ss_pred ecCCCCccCCeeEEEEEeccccCCccchhhhhheecCCccchhHHHHHHHHHHHHHHHcCCCCcEEEehhHHHHHHHhhc
Q 004057 30 YNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVGQ 109 (776)
Q Consensus 30 ~~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~~y~~~~~~~i~~~~v~~~l~~vl~~l~~~p~~~F~~~e~~~~~~w~~~~ 109 (776)
|..+......+++||+|||||||+||+||+++|+. +.++++|++|+++|+++|+++|+|+|+++|.+||+++
T Consensus 70 ~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~--------~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~e~ 141 (1045)
T 3bvx_A 70 YDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDL 141 (1045)
T ss_dssp CCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHHS
T ss_pred hhccccCCCCceEEEEEecCCCCccccchHHHhhh--------HHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHHC
Confidence 44333333448999999999999999999999986 4688999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCChhhHHHHHhhcC
Q 004057 110 SPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG 189 (776)
Q Consensus 110 ~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG~s~~~p~il~~~~G 189 (776)
+|+.+++||+||++|||||+||||||+||+++++||+||||++|++|++++||+.|++||+|||||||+++||||+ ++|
T Consensus 142 ~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil~-~~G 220 (1045)
T 3bvx_A 142 GENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYILQ-KSG 220 (1045)
T ss_dssp CHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHHH-TTT
T ss_pred CHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCCCCccHHHHHHHH-HcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred CcEEEEeecchhhhhhhccCCceeEEEEcCCCCCCCCeeEEeecC-CCCCCC------C----CCCcccCCC---CCCCC
Q 004057 190 FDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFP-VHYSPP------S----GFHFELTDD---FDPVQ 255 (776)
Q Consensus 190 ~~~~v~~R~~~~~~~~~~~~~~~eF~W~g~d~~~~gs~v~t~~~~-~~Y~~~------~----~~~~~~~~~---~~~~~ 255 (776)
|++++++|++|++++.++..++++|+|+|++....||+||||++| .+|+.| . .|+|+...+ .|||.
T Consensus 221 i~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~~~ 300 (1045)
T 3bvx_A 221 FKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWK 300 (1045)
T ss_dssp CCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCTTS
T ss_pred CCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCccccccccccccccccccCccc
Confidence 999999999999999998888999999954333339999999999 467642 1 355544322 46776
Q ss_pred CCC-CCccccHHHHHHHHHHHHHHhcccCCCCeeEEeccCCccCCchhhH---HHHHHHHHHHHhcCC--ceeEEEcChH
Q 004057 256 DNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESW---FKQMDKLIHYVNKGG--RVNALYSTPS 329 (776)
Q Consensus 256 ~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~~~~a~~~---~~~~~~li~~~n~~~--~~~i~~sT~~ 329 (776)
++| .+.++|++++++.+++++++++..|+++++|+|+|+||+|.++..| +++|+++|+++|+.+ .++++|||++
T Consensus 301 ~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~ 380 (1045)
T 3bvx_A 301 VPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQ 380 (1045)
T ss_dssp CCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHH
T ss_pred CCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECCHH
Confidence 555 4567899999999999999888889999999999999999997655 899999999999764 5899999999
Q ss_pred HHHHHHHhCC----CCCCCccCCcccccccCCCcccceeecchhhHHHHHHHHHHHHHHHHHHHhhCC---CCCCCchHH
Q 004057 330 LYTEAKNAAN----GPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGK---KSPGPTTSA 402 (776)
Q Consensus 330 ~yf~~~~~~~----~~~p~~~gD~~py~~~~~~~wtG~ytSr~~~K~~~R~~e~~L~~ae~l~~l~~~---~~~~~~~~~ 402 (776)
+||+++++.. ..||+++||||||+++.++||+|||||||.+|+++|++|++|++||+|++++.. .++...+++
T Consensus 381 ~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L~~ 460 (1045)
T 3bvx_A 381 EYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQ 460 (1045)
T ss_dssp HHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHHHH
T ss_pred HHHHHHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 9999998753 369999999999999989999999999999999999999999999999998753 456677899
Q ss_pred HHHHHHhhccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC---CCccccCccccccCCC
Q 004057 403 LGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPA---STFSQCPLLNISYCPP 479 (776)
Q Consensus 403 ~w~~l~~~qhHD~ItGts~~~V~~d~~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~---~~~~~~~~ln~s~~~~ 479 (776)
+|++|+++||||+||||++++|++||.+||.+|.+.++.+++.+++.|+..... .+..++ ..++.|.+++.+.||.
T Consensus 461 ~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (1045)
T 3bvx_A 461 ARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSI-YSPDFSFSYFTLDDSRWPGSGVEDS 539 (1045)
T ss_dssp HHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTT-CCCCTTSCSEEEECSSSSCTTTCCC
T ss_pred HHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccccccchhhhcccccccccc
Confidence 999999999999999999999999999999999999999999999999853221 111111 1223455566677765
Q ss_pred CCC-CCCCCC---ceEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCEEeEEEEeccccccccccchhhhccCCCCCCC
Q 004057 480 TEK-GIPEGK---NLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRV 555 (776)
Q Consensus 480 ~~~-~~~~~~---~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (776)
... .+ .++ ...|+|||||+|+|+++|+++|..+.+.|.|.+|++|++|+++.+.....+....+ ......
T Consensus 540 ~~~i~~-~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~ 613 (1045)
T 3bvx_A 540 RTTIIL-GEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGST 613 (1045)
T ss_dssp CCEECC-BTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEE
T ss_pred cccccc-cccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEEeEEEeeccccccccccccc-----cccCCC
Confidence 421 01 122 56899999999999999999999999999999999999999987543221100000 000122
Q ss_pred CeEEEEEEEeeCCCceEEEEEEecCCccc-cccccc----------ccc-CCCCCCceEecCCeE------EEEEECCCC
Q 004057 556 PRYWLLFQVTVPPLGWNTYFISRAAGKVK-RRKGFF----------LAA-DSPQDKTVEVGPGNL------KMSFSRTTG 617 (776)
Q Consensus 556 ~~~~l~f~~~vPplG~~~~~i~~~~~~~~-~~~~~~----------~~~-~~~~~~~~~leN~~~------~v~~~~~~G 617 (776)
..|+|+|.++||||||++|.|........ ...+.+ ... .....+...|||++| +|+||+ +|
T Consensus 614 ~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G 692 (1045)
T 3bvx_A 614 TKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QG 692 (1045)
T ss_dssp EEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TS
T ss_pred CcEEEEEEeccCCceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccccccccccEEEECC-CC
Confidence 45789999999999999999987654322 100000 000 001334578999999 999995 99
Q ss_pred ceEEEEecCCceEEeeeeeEEEEeeccCCCCccceeEecCCCcceecCCCccEEEEecCcEEEEEEEecceEEEEEEEec
Q 004057 618 QLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYI 697 (776)
Q Consensus 618 ~i~sl~dk~~g~~~~~~~~~~~Y~~~~~~~~~gaY~f~p~~~~~~~~~~~~~i~i~~Gpl~~~i~~~~~~~i~q~irLy~ 697 (776)
.|+||+||++|+++.+.+.|.+|.+...++.||||+|+|++...........+++++|||+++|++.+ .+++|++||
T Consensus 693 ~L~si~dk~~g~e~~~~~~f~~Y~~~~~~~~sgaY~F~P~~~~~~~~~~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL-- 769 (1045)
T 3bvx_A 693 LLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGL-PSVVHQTIM-- 769 (1045)
T ss_dssp CEEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSSCCCBSSSCEECCCCSCCEEEEECSSCEEEEEEE-TTEEEEEEE--
T ss_pred cEEEEEEcCCCeEEEEeeEEEEEecccCCCCCcceEecCCCCCcccccCCceEEEEeCCeEEEEEEEE-eeEEEEEEE--
Confidence 99999999999999999999999864445799999999988742222235577889999999999999 469999999
Q ss_pred CCCceEEEEEEccccccCCCCcEEEEEEeeeccCCceEEEccCCCceeeeccccccCcccccccccccccccccccccC
Q 004057 698 DKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPVIFFLLI 776 (776)
Q Consensus 698 ~~~~ie~~~~V~~~~~~~~~~~el~~~f~t~i~s~~~~ytDsnG~~~ikR~~~~~~~w~~~~~~pi~~NyYPv~s~~~i 776 (776)
++++|||+++|+|.+ ..||||+++|+|+|++++.||||+|||+++||+++. +.|+++|||||+++|||
T Consensus 770 ~~~~ieie~~Vd~~~---~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~--------~~p~~~NyYPv~s~~~i 837 (1045)
T 3bvx_A 770 RGGAPEIRNLVDIGS---LDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLD--------KLPLQANYYPIPSGMFI 837 (1045)
T ss_dssp SSSSCEEEEEECCTT---CTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCT--------TSCGGGGCEEESSEEEE
T ss_pred CCeeEEEEEEEecCC---CCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCC--------CCCcccceEEeeeeEEE
Confidence 788999999998863 358999999999999988999999999999999874 48899999999999986
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=8.2e-114 Score=1045.72 Aligned_cols=647 Identities=16% Similarity=0.208 Sum_probs=542.5
Q ss_pred ecCCCCccCCeeEEEEEeccccCCccchhhhhheecCCccchhHHHHHHHHHHHHHHHcCCCCc-EEEehhHHHHHHHhh
Q 004057 30 YNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRK-FVFAEMAFFHRWWVG 108 (776)
Q Consensus 30 ~~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~~y~~~~~~~i~~~~v~~~l~~vl~~l~~~p~~~-F~~~e~~~~~~w~~~ 108 (776)
|++|++..+++++||+|||||||+||+||+++|+. ++.++|++++++|+++|+++ |+|+++.++.+||.+
T Consensus 15 ~~~~~~~~~~~~~v~~v~HsH~D~~Wl~t~~~~~~---------~~~~~~~~vl~~l~~~p~~~~F~~~~q~~~~~~~~~ 85 (923)
T 2wyh_A 15 EVLFQGPAMATKKVHIISHSHWDREWYMAYEQHHM---------RLINLIDDLLEVFQTDPDFHSFHLDGQTIILDDYLK 85 (923)
T ss_dssp HHHSCCCCCCCEEEEEEEBCBCCSSSSSCHHHHHH---------HHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHH
T ss_pred hhccCCCCCCceEEEEEccCCCCcccccHHHHHHH---------HHHHHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHH
Confidence 88999999999999999999999999999999984 89999999999999999998 999998877799999
Q ss_pred cChHHHHHHHHHHHcCcEEEEccee-eeecccCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCChhhHHHHHhh
Q 004057 109 QSPEIQEQVRKLVDASQLEFVNGGW-CMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVE 187 (776)
Q Consensus 109 ~~p~~~~~vk~lv~~Grle~v~G~w-v~~De~~~~~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG~s~~~p~il~~~ 187 (776)
++|+.+++||+||++||||+ ||| ||+||+++|+||+||||++|++|+++ ||+.|++||+||+||||++|||||+ +
T Consensus 86 ~~p~~~~~vk~lV~~Grlei--G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~pD~FG~s~~lPqil~-~ 161 (923)
T 2wyh_A 86 VRPEREPEIRQAIASGKLRI--GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WGASVPLGYFPDTFGNMGQTPQLML-K 161 (923)
T ss_dssp HCGGGHHHHHHHHHTTSEEC--CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HTCCCSSEEESSCSSBCTTHHHHHH-T
T ss_pred HCHHHHHHHHHHHHcCCEEE--eeeeeccccccCCHHHHHHHHHHHHHHHHH-cCCCCceeEecCCCCcchHHHHHHH-H
Confidence 99999999999999999995 888 99999999999999999999999999 9999999999999999999999998 9
Q ss_pred cCCcEEEEeecc----hhhh---hhhccCCceeEEEEcCCCCCCCCeeEEeecCCCCCCCCCCCcccCCCCCCCCCCCCC
Q 004057 188 LGFDSVHFARID----YQDR---AKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLL 260 (776)
Q Consensus 188 ~G~~~~v~~R~~----~~~~---~~~~~~~~~eF~W~g~d~~~~gs~v~t~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~ 260 (776)
+||++++++|++ |+++ ..+...+.++|+|+|+| ||+||||++|.+|+.|..+. .
T Consensus 162 ~Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~d----Gs~Ilt~~~p~~Y~~g~~~~-----------~---- 222 (923)
T 2wyh_A 162 AGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPD----NSRILGLLFANWYSNGNEIP-----------T---- 222 (923)
T ss_dssp TTCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECTT----CCEEEEEECTTCTTTTCSCC-----------S----
T ss_pred cCCCEEEEEeccccccccccccchhhccCCCceEEEECCC----CCeEEEEECCCCccCCCCCC-----------C----
Confidence 999999999999 8754 22233456799999999 99999999999998763321 1
Q ss_pred ccccHHHHHHHHHHHHHHhcccCCCCeeEEeccCCccCCchhhHHHHHHHHHHHHhc-CCceeEEEcChHHHHHHHHhC-
Q 004057 261 DGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK-GGRVNALYSTPSLYTEAKNAA- 338 (776)
Q Consensus 261 ~~~n~~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~~~~a~~~~~~~~~li~~~n~-~~~~~i~~sT~~~yf~~~~~~- 338 (776)
+..+++++++++++.+++. ++++++|+|+|+||+|.. ++|+++|+++|+ .+.++++|||+++||++++++
T Consensus 223 ~~~~v~~~~~~~~~~~~~~---~~t~~~l~~~G~D~~~~~-----~~~~~~i~~~n~~~~~~~~~~sT~~~yf~~l~~~~ 294 (923)
T 2wyh_A 223 TEAEARLFWDKKLADAERF---ASTKHLLMMNGCDHQPVQ-----LDVTKAIALANQLYPDYEFVHSCFEDYLADLADDL 294 (923)
T ss_dssp SHHHHHHHHHHHHHHHHHH---CSSSEEEEEECCBTCCCC-----TTHHHHHHHHHHHCTTEEEEECCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHhc---CCCCeEEEEeecCCCCcc-----hhHHHHHHHHHhhCCCceEEECCHHHHHHHHHhhc
Confidence 2367778888887776543 899999999999998766 899999999998 578999999999999999875
Q ss_pred CCCCCCccCCcc-cccccCCCcc---cceeecchhhHHHHHHHHHHH-HHHHHHHHhh---CCCCCCCchHHHHHHHHhh
Q 004057 339 NGPWPLKTDDYF-PYADRRNAYW---TGFFTSRPALKGYVRVLSGFY-LASRQLEFLA---GKKSPGPTTSALGDALGIA 410 (776)
Q Consensus 339 ~~~~p~~~gD~~-py~~~~~~~w---tG~ytSr~~~K~~~R~~e~~L-~~ae~l~~l~---~~~~~~~~~~~~w~~l~~~ 410 (776)
...||+++|||+ ||. .+| +|||||||.+|++||++|++| +.||.|++++ +..||...++++||.|+++
T Consensus 295 ~~~lp~~~GEl~~~~~----~~W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~L~~~Wk~ll~~ 370 (923)
T 2wyh_A 295 PENLSTVQGEITSQET----DGWYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEVTSTYPHDQLRYAWKTLMQN 370 (923)
T ss_dssp CSCCCEEESCBSCTTS----CSSSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTT
T ss_pred cccCceecccccCccc----ccceecCCEeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHhcc
Confidence 467999999998 553 234 599999999999999999999 6999999985 5568888899999999999
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCccccCccccccCCCCCCCCCCCCce
Q 004057 411 QHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNL 490 (776)
Q Consensus 411 qhHD~ItGts~~~V~~d~~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~ 490 (776)
||||+|||||+++|++||..|+.++.+.++.+++.+++.|+..+... . . .++..
T Consensus 371 Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~~----------------------~---~-~~~~~ 424 (923)
T 2wyh_A 371 HPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIADAIDTR----------------------D---F-PMDSQ 424 (923)
T ss_dssp CBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCCT----------------------T---S-CTTSE
T ss_pred CCCcCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----------------------c---C-CCCce
Confidence 99999999999999999999999999999999999999998754200 0 0 12345
Q ss_pred EEEEEcCCCceeeEEEEEEEc-------------------------CCcEEEEcCCCCEEe-EEEEeccccccccccchh
Q 004057 491 VVAAYNPLGWNRTDIIRIPVN-------------------------DANLIVKDPLGNAIN-VQYVNLDNVTSNLRKFYT 544 (776)
Q Consensus 491 ~v~vfNpl~~~r~~~V~i~v~-------------------------~~~~~v~d~~G~~v~-~Qi~~~~~~~~~~~~~~~ 544 (776)
.++|||||+|+|+++|++++. ..++.|.|.+|++|| +|+++... ..... .
T Consensus 425 ~vvvfN~l~~~r~~vV~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~~qi~~~~~-~~~~~---~ 500 (923)
T 2wyh_A 425 PFVLFNTSGHSKTSVAELSLTWKKYHFGQRFPKEVYQEAQEYLARLSQSFQIIDTSGQVRPEAEILGTSI-AFDYD---L 500 (923)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHTCCSEEEEECTTCCBCTTCEEEEEEE-EEEEE---C
T ss_pred EEEEEcCCCceEeEEEEEEEEcccccccccccccccchhhhhhcccCCCEEEECCCCCEeccEEEEeccc-ccccc---c
Confidence 799999999999999999986 368999999999999 99988751 10000 0
Q ss_pred hhccCC-CCCCCCeEEEEEEEeeCCCceEEEEEEecCCccccccccccccCCC-CCCceEecCCeEEEEEECCCCceEEE
Q 004057 545 EAYLGQ-SSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSP-QDKTVEVGPGNLKMSFSRTTGQLKRM 622 (776)
Q Consensus 545 ~~~~~~-~~~~~~~~~l~f~~~vPplG~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~leN~~~~v~~~~~~G~i~sl 622 (776)
. ..|. .+....+++|.|.++||||||++|.|........... . .. ..+...|||++|+|+|| .+|.| ||
T Consensus 501 ~-~~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~~~~~-~-----~~~~~~~~~leN~~~~v~~d-~~G~l-si 571 (923)
T 2wyh_A 501 P-KRSFREPYFAIKVRLRLPITLPAMSWKTLALKLGNETTPSET-V-----SLYDDSNQCLENGFLKVMIQ-TDGRL-TI 571 (923)
T ss_dssp C-SSSCCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC------C-C-----CSEETTTTEEECSSEEEEEC-TTSCE-EE
T ss_pred c-ccccccccceeeEEEEEEEEcCCcceEEEEEEECCCcccccc-c-----ccccCCCceEecCeEEEEEe-CCCCE-EE
Confidence 0 0000 0001123689999999999999999987543221100 0 01 23457899999999999 57998 79
Q ss_pred EecCCceEEeeeeeEEEEeeccCCCCccceeEecCCC-ccee-cCCCccEEE-EecCcEEEEEEEec-------------
Q 004057 623 YNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGA-QPNV-VSRSVPIKI-IRGPMVDEVHQQFN------------- 686 (776)
Q Consensus 623 ~dk~~g~~~~~~~~~~~Y~~~~~~~~~gaY~f~p~~~-~~~~-~~~~~~i~i-~~Gpl~~~i~~~~~------------- 686 (776)
+||++|+++. +|.+|++. ++.||||+|+|... .+.. ......+++ ++||++++|++.+.
T Consensus 572 ~dk~~gr~~~---~~~~y~d~--~d~~day~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP~~~~~~L~~ 646 (923)
T 2wyh_A 572 TDKQSGLIYQ---DLLRFEDC--GDIGNEYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFAIPISADKLLQA 646 (923)
T ss_dssp EETTTCCEEE---EESEEEEE--ECCSCSSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEEEESSBCTHHHH
T ss_pred EECCCCeEEE---EEEEEeec--CCCCCeeEEEcCCCCceeeccCCCceEEEEEcCCCEEEEEEEEEecCCccchhhhcc
Confidence 9999999987 78888763 68999999999865 3442 234456776 45999999998761
Q ss_pred ----------------c-----eEEEEEEEecCCCceEEEEEEccccccCCCCcEEEEEEeeeccCCceEEEccCCCcee
Q 004057 687 ----------------S-----WIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFL 745 (776)
Q Consensus 687 ----------------~-----~i~q~irLy~~~~~ie~~~~V~~~~~~~~~~~el~~~f~t~i~s~~~~ytDsnG~~~i 745 (776)
+ +++|+++||+++++|||+++|||+ +.+|+|+++|+|+|.++.++| | |||+++
T Consensus 647 ~~~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~~ie~~~~vd~~----~~~~~l~v~fpt~i~s~~~~~-d-~~fg~i 720 (923)
T 2wyh_A 647 EMEAVIDITERQARRSQEKAELTLTTLIRMEKNNPRLQFTTRFDNQ----MTNHRLRVLFPTHLKTDHHLA-D-SIFETV 720 (923)
T ss_dssp HHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCSCEEEEEEEEEC----CCSEEEEEEEECCCCCSEEEE-E-ETTEEE
T ss_pred ccccccchhhhhhcccccccceEEEEEEEEeCCCceEEEEEEECCc----cCCEEEEEEeccccCCCCEEE-e-cCceEE
Confidence 2 599999999999999999999999 579999999999999987665 6 999999
Q ss_pred eecccccc-CcccccccccccccccccccccC
Q 004057 746 KRVRDYRA-DWSLQVNEPVAGNYYPVIFFLLI 776 (776)
Q Consensus 746 kR~~~~~~-~w~~~~~~pi~~NyYPv~s~~~i 776 (776)
+|+++.++ +|+. ++||||+.+.|+|
T Consensus 721 ~R~~~~~~~~w~~------a~~~~p~~~~v~l 746 (923)
T 2wyh_A 721 KRPNHPDATFWKN------PSNPQHQECFVSL 746 (923)
T ss_dssp EEESSCCTTTCCC------SCCCEECSSEEEE
T ss_pred EccCCCCCCCccc------ccceEeeeeEEEE
Confidence 99999887 7865 7899999998864
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=1.4e-109 Score=1000.95 Aligned_cols=640 Identities=17% Similarity=0.213 Sum_probs=495.0
Q ss_pred CeeEEEEEeccccCCccchhhhhheecCCccchhHHHHHHHHHHHHHHHcCCCCcEEEe-hhHHHHHHHhhcChHHHHHH
Q 004057 39 GKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFA-EMAFFHRWWVGQSPEIQEQV 117 (776)
Q Consensus 39 ~~~~v~~v~HsH~D~gWl~t~~~y~~~~~~~i~~~~v~~~l~~vl~~l~~~p~~~F~~~-e~~~~~~w~~~~~p~~~~~v 117 (776)
.+.+||+|||||||+|||||+++|+. ++.++|++++++|+++|+++|.+. ++.++.+||++++|+.+++|
T Consensus 5 ~~~~v~~v~HsH~D~~Wl~t~~e~~~---------~~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~~~~~v 75 (899)
T 3lvt_A 5 TKKKVYIVSHSHWDREWYLPYEEHHM---------RLIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPEKKEAV 75 (899)
T ss_dssp CCEEEEEEEEECC----CCCHHHHHH---------HHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHHH
T ss_pred ccceEEEECCCCCChHhcCcHHHHHH---------HHHHHHHHHHHHHHhCCCceEEEEcccHHHHHHHHhhCHHHHHHH
Confidence 45799999999999999999999984 899999999999999999999885 46677799999999999999
Q ss_pred HHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCChhhHHHHHhhcCCcEEEEee
Q 004057 118 RKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFAR 197 (776)
Q Consensus 118 k~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG~s~~~p~il~~~~G~~~~v~~R 197 (776)
|+||++|||| +||+|||+||+++++||+||||++|++|+++ ||..|++||+||+||||++|||||+ ++||++++++|
T Consensus 76 k~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~~-~~Gi~~~~~~R 152 (899)
T 3lvt_A 76 KKAVQAGKLK-IGPFYILQDDFLISSESNVRNMLIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMMQ-LANLPAAAFGR 152 (899)
T ss_dssp HHHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHHHHHHHHHHH-HTCCCCCEEESCCCT---THHHHHH-TTTCCEEEEC-
T ss_pred HHHHHcCCEE-ECchhccccccCCCHHHHHHHHHHHHHHHHH-cCCCCceeEeCCCCCCchHHHHHHH-HcCCCeEEEec
Confidence 9999999999 7999999999999999999999999999999 9999999999999999999999998 99999999999
Q ss_pred cc----hhhhhh--hccCCceeEEEEcCCCCCCCCeeEEeecCCCCCCCCCCCcccCCCCCCCCCCCCCccccHHHHHHH
Q 004057 198 ID----YQDRAK--RKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVND 271 (776)
Q Consensus 198 ~~----~~~~~~--~~~~~~~eF~W~g~d~~~~gs~v~t~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 271 (776)
++ ++.... ......++|+|+|+| ||+||||+++++|+.+..+ | . ..++++.++++
T Consensus 153 g~~~~~~~~~k~~~~~~~p~~~F~W~g~d----Gs~vlt~~~~~~Y~~g~~~---------p--~----~~~~~~~~~~~ 213 (899)
T 3lvt_A 153 GVKPIGFDNQVLESDYSSQYSEMWWEGPD----QTKIFGLLFANWYSNGNEI---------P--S----EKEAAIAFWKQ 213 (899)
T ss_dssp --------------------CEEEEECTT----SCEEEEEECCCC----CCS---------C--S----SHHHHHHHHHH
T ss_pred ccccccccccccccccCCCCceEEEECCC----CCeEEEEECCCcCcCccCC---------C--C----cHHHHHHHHHH
Confidence 86 332211 001245699999999 9999999999999865321 1 1 22567777777
Q ss_pred HHHHHHHhcccCCCCeeEEeccCCccCCchhhHHHHHHHHHHHHhc-CCceeEEEcChHHHHHHHHhCC-CCCCCccCCc
Q 004057 272 FIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK-GGRVNALYSTPSLYTEAKNAAN-GPWPLKTDDY 349 (776)
Q Consensus 272 ~~~~~~~~~~~~~~~~il~~~G~Df~~~~a~~~~~~~~~li~~~n~-~~~~~i~~sT~~~yf~~~~~~~-~~~p~~~gD~ 349 (776)
+++.+++ .+.++++|+|+|+|| ++++++|+++++++|+ .+.+++++||+++||++++++. ..||+++|||
T Consensus 214 ~~~~~~~---~~~t~~il~~~G~D~-----~p~~~~l~~~i~~~n~~~p~~~~~~st~~~yf~~l~~~~~~~lp~~~GEl 285 (899)
T 3lvt_A 214 KLADVER---YASTNHLLMMNGVDH-----QPVQRDITKAIALANELFPEYEFIHSNFDDYLKAVQEELPEDLGTVTGEL 285 (899)
T ss_dssp HHHHHHH---HCSSSEEEEEEEEC-----------CHHHHHHHHHHHCSSEEEEECCHHHHHHHHHHTCC--CCEEECCC
T ss_pred HHHHHHh---hcCCCeEEEeecCCC-----CchHHHHHHHHHHHHhcCCCceEEEcCHHHHHHHHHHhccccCCcccccc
Confidence 7766544 378999999999985 4667999999999997 4678999999999999999876 7899999999
Q ss_pred c-cccccCCCccc-ceeecchhhHHHHHHHHHHHH-HHHHHHHhh---CCCCCCCchHHHHHHHHhhccccCCCCCCchh
Q 004057 350 F-PYADRRNAYWT-GFFTSRPALKGYVRVLSGFYL-ASRQLEFLA---GKKSPGPTTSALGDALGIAQHHDAVTGTAKQH 423 (776)
Q Consensus 350 ~-py~~~~~~~wt-G~ytSr~~~K~~~R~~e~~L~-~ae~l~~l~---~~~~~~~~~~~~w~~l~~~qhHD~ItGts~~~ 423 (776)
+ ++.++ -||+ |+|||||++|++||++|++|+ +||+|++++ +..||...++++|+.|+++||||+|||||+++
T Consensus 286 ~~~~~~G--~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~l~~~Wk~ll~~Q~HD~i~Gtsi~~ 363 (899)
T 3lvt_A 286 TSQETDG--WYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAYEVTGDYPHDQFDYAWKTLLQNHPHDSICGCSVDE 363 (899)
T ss_dssp -------------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCSTTTTTSCSCHH
T ss_pred cccccCc--eEEECCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHhccCCCCccCCcCcHH
Confidence 8 33321 1333 556699999999999999999 699999985 45788888999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCccccCccccccCCCCCCCCCCCCceEEEEEcCCCceee
Q 004057 424 TTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRT 503 (776)
Q Consensus 424 V~~d~~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~v~vfNpl~~~r~ 503 (776)
|++||..||.++.+.++.+++.+++.|+..+.. +. ++ ++...++|||||+|+|+
T Consensus 364 V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~--------------------~~-----~~-~~~~~v~vfN~l~~~r~ 417 (899)
T 3lvt_A 364 VHRGMMTRFENANDVGHFLADEATRQLTEAIDT--------------------SV-----FP-EKAHPFVLFNTSGYQKT 417 (899)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC--------------------TT-----SC-TTCEEEEEEECSSSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--------------------cc-----CC-CCCCEEEEEeCCCceee
Confidence 999999999999999999999999999975421 00 01 23568999999999999
Q ss_pred EEEEEEEcC----------------------CcEEEEcCCCCEEeEEEEecccccc-ccccchhhhccCCCCCCCCeEEE
Q 004057 504 DIIRIPVND----------------------ANLIVKDPLGNAINVQYVNLDNVTS-NLRKFYTEAYLGQSSKRVPRYWL 560 (776)
Q Consensus 504 ~~V~i~v~~----------------------~~~~v~d~~G~~v~~Qi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 560 (776)
++|++++.. +.+.|.|.+|++||+|+++...... .++...+ +.+.....++|
T Consensus 418 ~~V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~qv~~~~~~~~~~l~~~~~-----~~~~~~~~~~l 492 (899)
T 3lvt_A 418 EVVTVEVEIERLPFYTGKPEDLYHELKQKATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKDAF-----RQPYMAKYLTV 492 (899)
T ss_dssp EEEEEEEEEEEEEGGGSCHHHHHHHHHHSCCCCEEEECSSSCEECCEEEEEEEEEEECCC----------CEEEEEEEEE
T ss_pred eEEEEEEEccccccccccchhhhhhhccccCCceEEECCCCCEEeEEEeecccccccccccccc-----ccccccceEEE
Confidence 999999874 6799999999999999998754221 1111000 00001124578
Q ss_pred EEEE-eeCCCceEEEEEEecCCccccccccccccCCCCCCceEecCCeEEEEEECCCCceEEEEecCCceEEeeeeeEEE
Q 004057 561 LFQV-TVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLW 639 (776)
Q Consensus 561 ~f~~-~vPplG~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~v~~~~~~G~i~sl~dk~~g~~~~~~~~~~~ 639 (776)
.|.+ +||||||++|.|.+........ .+ ....+...|||++|+|+|| .+|.| +|+||.+|+++. .+..
T Consensus 493 ~f~a~~vPalGy~~~~i~~~~~~~~~~--~~----~~~~~~~~leN~~~~v~~d-~~G~l-sl~Dk~~gre~~---~~~~ 561 (899)
T 3lvt_A 493 ELSVKEMAPFSWDSFALIQGETKAFEG--SL----LAQPATNEMENEFIQVKIE-NNGSL-TIADKKTGETFS---KLLT 561 (899)
T ss_dssp EEEEEEECTTEEEEEEEEESCCCCCCS--CC----SEETTTTEEECSSEEEEEC-TTSCE-EEEETTTCCEEE---EETE
T ss_pred EEEecCCCCCCCEEEEEEecCcccccc--cc----cccccCcEEecCcEEEEEc-CCCcE-EEEECCCCeEEE---EEEE
Confidence 8888 9999999999998765432210 00 0011467899999999999 59999 699999999987 4556
Q ss_pred EeeccCCCCccceeEecCCC-cceecCC-CccEEE-EecCcEEEEEEEec----------------------------c-
Q 004057 640 YGSMVDTQSSGAYIFRPNGA-QPNVVSR-SVPIKI-IRGPMVDEVHQQFN----------------------------S- 687 (776)
Q Consensus 640 Y~~~~~~~~~gaY~f~p~~~-~~~~~~~-~~~i~i-~~Gpl~~~i~~~~~----------------------------~- 687 (776)
|++. ++.||+|+|+|... .++.... ...+++ ++||++++|++++. +
T Consensus 562 ~~d~--gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~ 639 (899)
T 3lvt_A 562 FEDT--GDIGNEYIFFKPTEDQGITTENVTAEITNKENSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRST 639 (899)
T ss_dssp EEEE--ECCSBTTBCCCCTTCCCEESTTCCCEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCS
T ss_pred EecC--CCCCCceeecCCcCCceeeccCCCceEEEEEcCCCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccc
Confidence 6642 67899999999765 3444332 357776 69999999987642 2
Q ss_pred -----eEEEEEEEecCCCceEEEEEEccccccCCCCcEEEEEEeeeccCCceEEEccCCCceeeeccccccCcccccccc
Q 004057 688 -----WIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEP 762 (776)
Q Consensus 688 -----~i~q~irLy~~~~~ie~~~~V~~~~~~~~~~~el~~~f~t~i~s~~~~ytDsnG~~~ikR~~~~~~~w~~~~~~p 762 (776)
+++|+|+||+++++|||+++|||+ +.+|+|+++||++|.++.++|++ +|++|+|+++.+++|+
T Consensus 640 ~~~~~~i~q~i~L~~~~~~id~~~~Vdw~----~~~~~Lrv~Fp~~i~s~~~~~d~--~fG~i~Rpt~~~t~We------ 707 (899)
T 3lvt_A 640 TLRPFEITTMVTMIKESNQLFFETTINNQ----IKDHRLRVLFPTGMVTETHEADS--IYEVVTRPNQVSDTWE------ 707 (899)
T ss_dssp CEEEEEEEEEEEEETTCCCEEEEEEEEEC----CCSEEEEEEECCSCCCSEEEEEC--SSSEEEEEC-------------
T ss_pred cccceEEEEEEEEeCCCCEEEEEEEECCC----cCCEEEEEECCCCCCcCceEEec--cceEEECCCCCCcccc------
Confidence 699999999999999999999998 78999999999999998888764 6789999999999997
Q ss_pred ccccccccccccc
Q 004057 763 VAGNYYPVIFFLL 775 (776)
Q Consensus 763 i~~NyYPv~s~~~ 775 (776)
.++|+||+.+.+.
T Consensus 708 ~a~~e~~~~~~vd 720 (899)
T 3lvt_A 708 NPTNPQHQQAFVN 720 (899)
T ss_dssp CCCCCEECSSEEE
T ss_pred CCCcceeeeeEEE
Confidence 3779999988775
No 4
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=100.00 E-value=2.5e-73 Score=597.83 Aligned_cols=293 Identities=46% Similarity=0.860 Sum_probs=275.1
Q ss_pred eecCCCCccCCeeEEEEEeccccCCccchhhhhheecCCccchhHHHHHHHHHHHHHHHcCCCCcEEEehhHHHHHHHhh
Q 004057 29 KYNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVG 108 (776)
Q Consensus 29 ~~~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~~y~~~~~~~i~~~~v~~~l~~vl~~l~~~p~~~F~~~e~~~~~~w~~~ 108 (776)
-|++|+.+.+++++||+|||||+|+||+||+++|+.++++.|+.+++.++|++++++|+++|+++|+|+|++++.+||++
T Consensus 2 ~~~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~e~~~~~~~~i~~~~~~~~~~~vl~~l~~~p~~~F~~~e~~~~~~w~~~ 81 (298)
T 1o7d_A 2 GYKTCPKVKPDMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLANPTRRFIYVEIAFFSRWWRQ 81 (298)
T ss_dssp CCTTCCCCCSSSEEEEEEEBCBCCSSSSSCHHHHHHTCCTTTCCCCHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHT
T ss_pred CCcCCCCCCCCceEEEEeCCCCCcccccccHHHhhccccchhHHHHHHHHHHHHHHHHHHCCCCeEEEecchHhHHHHHh
Confidence 38999999999999999999999999999999999999999987789999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHHHHcCCC--CcceeecCCCCCChhhHHHHHh
Q 004057 109 QSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKT--PKAGWQIDPFGHSAVQAYLLGV 186 (776)
Q Consensus 109 ~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~~~fG~~--~~~~w~~D~FG~s~~~p~il~~ 186 (776)
++|+.+++||+||++|||||+||||||+||+++++||+||||++|++|++++||+. |++||+||+||||+++||||+
T Consensus 82 ~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s~~lP~il~- 160 (298)
T 1o7d_A 82 QTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQASLFA- 160 (298)
T ss_dssp SCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCCHHHHHHHH-
T ss_pred cCHHHHHHHHHHHHCCCEEEECceeeccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCceeEeCCCCCccHHHHHHHH-
Confidence 99999999999999999999999999999999999999999999999999999997 999999999999999999997
Q ss_pred hcCCcEEEEeecchhhhhhhccCCceeEEEEcCCCCC-CCCeeEEeecCCCCCCCCCCCcccCCCCCCCCCCCCCccccH
Q 004057 187 ELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFG-SSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNV 265 (776)
Q Consensus 187 ~~G~~~~v~~R~~~~~~~~~~~~~~~eF~W~g~d~~~-~gs~v~t~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 265 (776)
++||++++++|++|++++.+...+.++|+|+|+++++ +||+||||++|.+|++|.+|||+..|.+.|++++|.++++|+
T Consensus 161 ~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dgs~i~t~~~~~~Y~~~~g~~fd~~~~~~p~~~~~~~~~~nv 240 (298)
T 1o7d_A 161 QMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPTADLFTSVLPNMYNPPEGLCWDMLCADKPVVEDTRSPEYNA 240 (298)
T ss_dssp HHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTTTEEEEEECSSTTSCCTTCCCSTTCCCCCCCCCTTSTTCCH
T ss_pred HcCCCeEEEEecccccccccccCCCceEEEECCCCCCCCCCeEEEEEeCCCCCCCCCcccccccCCcCccCCccchHHHH
Confidence 9999999999999999988666778899999995444 499999999999999999999998888888888888888999
Q ss_pred HHHHHHHHHHHHHhcccCCCCeeEEeccCCccCCchhhHHHHHHHHHHHHhcCCcee
Q 004057 266 EQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVN 322 (776)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~~~~a~~~~~~~~~li~~~n~~~~~~ 322 (776)
+++++.|+++++++++.|+++++|+|+|+||+|.+|..||.||++||+++|++..++
T Consensus 241 ~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~a~~~f~n~~~li~~iN~~~~~~ 297 (298)
T 1o7d_A 241 KELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQRAN 297 (298)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTTHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHhhcCCCcEEeccCCCCCccchhHHHHHHHHHHHHHhhcCccC
Confidence 999999999999999999999999999999999999999999999999999876443
No 5
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=100.00 E-value=1.7e-37 Score=319.21 Aligned_cols=177 Identities=45% Similarity=0.813 Sum_probs=162.0
Q ss_pred ceEecCCeEEEEEECCCCceEEEEecCCceEEeeeeeEEEEeecc----CCCCccceeEecCCCcceecCCCccEEEEec
Q 004057 600 TVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMV----DTQSSGAYIFRPNGAQPNVVSRSVPIKIIRG 675 (776)
Q Consensus 600 ~~~leN~~~~v~~~~~~G~i~sl~dk~~g~~~~~~~~~~~Y~~~~----~~~~~gaY~f~p~~~~~~~~~~~~~i~i~~G 675 (776)
.+.|+|++++|+||+.+|.|++++++.+|.++.+.++|.+|.+.. +.+.||||+|+|++..+.++.....++|.+|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred cEEEcCceEEEEECCCCCcEEEEEEcCCCeEEEEeEEEEEEecccCCCCCCCCCceEEecCCCCCCcccCCCcEEEEEEC
Confidence 468999999999997789999999999999999999999999753 1458999999998876555666667889999
Q ss_pred CcEEEEEEEecceEEEEEEEecCCCceEEEEEEccccccCCCCcEEEEEEeeeccCCceEEEccCCCceeeeccccccCc
Q 004057 676 PMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADW 755 (776)
Q Consensus 676 pl~~~i~~~~~~~i~q~irLy~~~~~ie~~~~V~~~~~~~~~~~el~~~f~t~i~s~~~~ytDsnG~~~ikR~~~~~~~w 755 (776)
|++++|++.++++++|++|||++..+||+++.|+++|+.++.|+|+++||.|+|+++++||||+||+||+||.+++|++|
T Consensus 82 ~lv~eV~~~~~~~~sq~~Rly~~~~~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~kR~~~~r~~~ 161 (282)
T 1o7d_D 82 SLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTW 161 (282)
T ss_dssp SSCEEEEEEEETTEEEEEEECTTCSSEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEEEEETTCCSSS
T ss_pred CEEEEEEEEECCcEEEEEEEecCCceEEEEEEEccccccCCCCcEEEEEEEeeeccCCeEEECCCCceeeEEEecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccccccC
Q 004057 756 SLQVNEPVAGNYYPVIFFLLI 776 (776)
Q Consensus 756 ~~~~~~pi~~NyYPv~s~~~i 776 (776)
+++.++|++||||||+++|||
T Consensus 162 ~~~~~~pv~gNYYPv~s~~~I 182 (282)
T 1o7d_D 162 KLNQTEPVAGNYYPVNSRIYI 182 (282)
T ss_dssp CCCCSCTTGGGCEEESSEEEE
T ss_pred ccccccCcccceeeeeeEEEE
Confidence 999999999999999999997
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=99.97 E-value=7.4e-30 Score=245.60 Aligned_cols=150 Identities=37% Similarity=0.646 Sum_probs=132.5
Q ss_pred chHHHHHHHHhhccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCccccCccccccCC
Q 004057 399 TTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCP 478 (776)
Q Consensus 399 ~~~~~w~~l~~~qhHD~ItGts~~~V~~d~~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ln~s~~~ 478 (776)
.++++||+|+++||||+||||++++|++||..||.++++.++.+++.+++.|+... ..|+.|.++|++.||
T Consensus 2 ~L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~---------~~~~~~~~ln~~~~~ 72 (159)
T 1o7d_C 2 DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLK---------EDFAFCRKLNISICP 72 (159)
T ss_dssp CSHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------SCEECCTTGGGTCCH
T ss_pred hHHHHHHHHhCcccCCcCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---------cccccccccccccCc
Confidence 47889999999999999999999999999999999999999999999999998532 257789999999998
Q ss_pred CCCCCCCCCCceEEEEEcCCCceeeEEEEEEEcCCcEEEEcCCCCEEeEEEEeccccccccccchhhhccCCCCCCCCeE
Q 004057 479 PTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRY 558 (776)
Q Consensus 479 ~~~~~~~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (776)
.++ .++...|+|||||+|+|+++|+++|+.+.+.|.|.+|++|++|+++.+.. ...
T Consensus 73 ~~~----~~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~--------------------~~~ 128 (159)
T 1o7d_C 73 LTQ----TAERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS--------------------DSQ 128 (159)
T ss_dssp HHH----HCSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT--------------------TEE
T ss_pred ccc----CCccEEEEEECCCCceEeEEEEEEEcCCcEEEEcCCCCEeeeEEEeccCC--------------------Cce
Confidence 653 13457899999999999999999999999999999999999999987532 235
Q ss_pred EEEEEEeeCCCceEEEEEEecCC
Q 004057 559 WLLFQVTVPPLGWNTYFISRAAG 581 (776)
Q Consensus 559 ~l~f~~~vPplG~~~~~i~~~~~ 581 (776)
+|.|.++||||||++|.|..++.
T Consensus 129 ~l~f~a~vP~lG~~ty~i~~~~~ 151 (159)
T 1o7d_C 129 ELLFSALVPAVGFSIYSVSQMPN 151 (159)
T ss_dssp EEEEEEEECTTEEEEEEEEECC-
T ss_pred EEEEEeecCCceeEEEEEEECCC
Confidence 79999999999999999987543
No 7
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=99.85 E-value=9.3e-22 Score=163.13 Aligned_cols=74 Identities=54% Similarity=0.906 Sum_probs=70.6
Q ss_pred ceeEEEcChHHHHHHHHhCCCCCCCccCCcccccccCCCcccceeecchhhHHHHHHHHHHHHHHHHHHHhhCC
Q 004057 320 RVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGK 393 (776)
Q Consensus 320 ~~~i~~sT~~~yf~~~~~~~~~~p~~~gD~~py~~~~~~~wtG~ytSr~~~K~~~R~~e~~L~~ae~l~~l~~~ 393 (776)
.++++||||+|||+++++.+..||+++||||||+++.++||||||||||.+|+++|++|+.|++||+|+++++.
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L~~la~~ 75 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKANLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALAGP 75 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTCCCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eEEEEeCCHHHHHHHHHHhCCCCcccCCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 47899999999999999988899999999999999999999999999999999999999999999999998753
No 8
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=99.83 E-value=1.6e-18 Score=200.69 Aligned_cols=145 Identities=19% Similarity=0.247 Sum_probs=131.6
Q ss_pred CeeEEEEEeccccCCc-cchhhhhheecCCccchhHHHHHHHHHHHHHHHcCCCCcEEEehhHHHHHHHhhcChHHHHHH
Q 004057 39 GKLNVHLVAHSHDDVG-WLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVGQSPEIQEQV 117 (776)
Q Consensus 39 ~~~~v~~v~HsH~D~g-Wl~t~~~y~~~~~~~i~~~~v~~~l~~vl~~l~~~p~~~F~~~e~~~~~~w~~~~~p~~~~~v 117 (776)
++..|+++.|+|+|.+ |.|.+++ .+.+.+..+++.|+++|+++|.+.-...+.+|+++.+|+..++|
T Consensus 2 ~~~~l~lv~H~HqP~~~~~~~~e~------------a~~~~Y~pll~ll~~~~~~k~~~~~s~~ll~~l~~~~p~l~~~i 69 (659)
T 1k1x_A 2 ERINFIFGIHNHQPLGNFGWVFEE------------AYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEENKPDYLDLL 69 (659)
T ss_dssp CCEEEEEEEEECCCTTCCHHHHHH------------HHHHTHHHHHHHHTTCTTCCEEEEECHHHHHHHHHHCHHHHHHH
T ss_pred CceEEEEEEEccCCCccCcHHHHH------------HHHHHHHHHHHHHHhCCCcEEEEEccHHHHHHHHHHCHHHHHHH
Confidence 3578999999999999 5555553 35678889999999999999986666666789999999999999
Q ss_pred HHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCChhhHHHHHhhcCCcEEEEee
Q 004057 118 RKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFAR 197 (776)
Q Consensus 118 k~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG~s~~~p~il~~~~G~~~~v~~R 197 (776)
|+++++|++|+++|+|+.++..++++|++++|+..|+++++ +||.+|+..|+||+ |+++++|+||+ ++||+++++..
T Consensus 70 k~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL~-~~Gi~y~~td~ 146 (659)
T 1k1x_A 70 RSLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYAR-KLGYDAKGVWLTER-VWQPELVKSLR-EAGIEYVVVDD 146 (659)
T ss_dssp HHHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHHHHHHHH-HTTCCCCEEECGGG-CBCTTHHHHHH-HTTCCEEEEEH
T ss_pred HHHHHCCCEEEEccCcccccccCCCHHHHHHHHHHHHHHHH-HcCCCCCEEECccc-ccChhHHHHHH-HcCCcEEEECc
Confidence 99999999999999999999999999999999999999999 99999999999999 69999999998 99999999975
Q ss_pred c
Q 004057 198 I 198 (776)
Q Consensus 198 ~ 198 (776)
.
T Consensus 147 ~ 147 (659)
T 1k1x_A 147 Y 147 (659)
T ss_dssp H
T ss_pred h
Confidence 4
No 9
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=99.06 E-value=1.1e-09 Score=121.59 Aligned_cols=295 Identities=14% Similarity=0.079 Sum_probs=167.3
Q ss_pred HhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCC-CHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCCh------
Q 004057 106 WVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATT-HYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSA------ 178 (776)
Q Consensus 106 ~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~-~~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG~s~------ 178 (776)
|++..++..+++|+|++.|++||++++++.+-..+. ..|++..|+..|.+.++++||.+|+..|+|.+ +++.
T Consensus 137 ~~~~~~dii~~fr~L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~ 215 (540)
T 3p0b_A 137 FQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPWKP 215 (540)
T ss_dssp HHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEECC
T ss_pred HHHhhHHHHHHHHHHHHCCCEEEEcCCchhhHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECccc-ceeCcccccc
Confidence 445689999999999999999999999999998888 58999999999999999999999999999998 9998
Q ss_pred -----------hhHHHHHhhcCCcEEEEeecchhhhhhhccCCceeEEEEcCCC---------CCCCCeeEEee------
Q 004057 179 -----------VQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKT---------FGSSSQIFTNA------ 232 (776)
Q Consensus 179 -----------~~p~il~~~~G~~~~v~~R~~~~~~~~~~~~~~~eF~W~g~d~---------~~~gs~v~t~~------ 232 (776)
.+..+|+ ++||+++++.--.-.....++.-. +....+... .++|-.||.--
T Consensus 216 ~~~~~~~~~~~~l~~~L~-~~Gi~y~~vd~~~~~~~~~~p~yG--~~~~~p~~~~~~py~v~~~~~~i~vf~RD~~lS~~ 292 (540)
T 3p0b_A 216 PVEGPPEGVRPGVDELLM-RAGIRYTFVDAHLVQGGEPLSPYG--EAALGPVESQEATYHVHELESGLRVLARNPETTLQ 292 (540)
T ss_dssp SSSCSCCEEECCHHHHHH-HTTCCEEEECTHHHHCSSCCCC----------CCCCGGGGSEEECTTSCEEEEBCHHHHHH
T ss_pred ccccccccchhhHHHHHH-HcCCeEEEECchhhccCCCCCCCC--ccccccccccccceeeccCCCceEEEeCCHHHHhh
Confidence 9999997 999999998432211000000000 001111110 01244444310
Q ss_pred ---cCCCCCC------------CCCCCcccCCC-CCCCCC----CCCCccccHHHHHHHHHHHHHHhcccCCCCeeEEec
Q 004057 233 ---FPVHYSP------------PSGFHFELTDD-FDPVQD----NPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTM 292 (776)
Q Consensus 233 ---~~~~Y~~------------~~~~~~~~~~~-~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~il~~~ 292 (776)
...+|-. ..||.|-+... ..|..+ +|......+++-++.|+...+++......+.+.+++
T Consensus 293 VWS~~~GYPGd~~YReF~rd~~~tGfky~rit~~~~~l~~K~pYdp~~A~~~~~~hA~~Fv~~l~~~~~~~~~~lvv~~~ 372 (540)
T 3p0b_A 293 VWSADYGYPGEGLYREFHRKDPLSGLHHWRVTHRKADLAEKAPYDPEAAFAKTEEHARHFVGLLERLAGRHPEGVILSPY 372 (540)
T ss_dssp HHCTTTSGGGSTTSBCSSCCCTTTCCCCBBCCSTTCCGGGCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred ccccccCCCCChhHhhhccccccccceeeccCCccCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 0011210 01232211110 001100 111111123344778888776554444446666665
Q ss_pred cC---CccCCchhhHHHHHHHHHHHHhcCCceeEEEcChHHHHHHHHhCCCCCCCccCCcccccccCCCcccceeecchh
Q 004057 293 GD---DFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPA 369 (776)
Q Consensus 293 G~---Df~~~~a~~~~~~~~~li~~~n~~~~~~i~~sT~~~yf~~~~~~~~~~p~~~gD~~py~~~~~~~wtG~ytSr~~ 369 (776)
-. .|.+.. |+ .-++.+++.+.+. ..+++.|+++|.+....... ++ .|-+-. .+.++.|.|--.. .
T Consensus 373 D~ElfGHww~e-G~--~fL~~l~r~l~~~--~~i~~~T~se~L~~~~~~~~-~~--~sSWg~--~g~~~~Wlg~~~~--w 440 (540)
T 3p0b_A 373 DAELFGHWWYE-GV--AWLEAVLRLLAQN--PKVRPVTAREAVQGPAVRTA-LP--EGSWGR--GGDHRVWLNEKTL--D 440 (540)
T ss_dssp EGGGBTTTBTT-HH--HHHHHHHHHHTTC--SSEEECCHHHHTCSCEEECC-CC--SBCSSG--GGSSTTTSSGGGH--H
T ss_pred chhhcccCccH-HH--HHHHHHHHHHhhc--CCeEEECHHHHHHhCCCCCC-CC--CCCCCC--CCCcCccCCCHHH--H
Confidence 32 133333 33 3366777766432 46899999999865332222 21 111110 1335678775444 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh-CCCCCCCchHHHHHHHHhhccccCC----CCCCch
Q 004057 370 LKGYVRVLSGFYLASRQLEFLA-GKKSPGPTTSALGDALGIAQHHDAV----TGTAKQ 422 (776)
Q Consensus 370 ~K~~~R~~e~~L~~ae~l~~l~-~~~~~~~~~~~~w~~l~~~qhHD~I----tGts~~ 422 (776)
+=+...+++..+. .++ ........++.+++.|++.|--|.- +||+.+
T Consensus 441 ~~~~l~~a~~~m~------~~~~~~~~~~r~l~Qa~RELLlAesSDW~f~~~~~t~~~ 492 (540)
T 3p0b_A 441 YWEKVYRAEGAMR------EAARRGVLPEGVLRQAMRELLLLEASDWPFLMETGQAEA 492 (540)
T ss_dssp HHHHHHHHHHHHH------HHHHHCCSCHHHHHHHHHHHHHHTBTHHHHTTTCTTTHH
T ss_pred HHHHHHHHHHHHH------HHhhcccccHHHHHHHHHHHHHHHhCccHHHccCCCchH
Confidence 2222333332222 221 1111224578899999999999973 456543
No 10
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=99.01 E-value=2.1e-09 Score=119.84 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=83.6
Q ss_pred HHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCC-HHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCCh-----
Q 004057 105 WWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTH-YVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSA----- 178 (776)
Q Consensus 105 w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~-~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG~s~----- 178 (776)
.|.+..++...++|+|++.|++||++++++.+-..+.. .|++..|+..|.+.++++||.+|+..|+|.+ +++.
T Consensus 115 ~~~~~~~dii~~fr~L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~ 193 (562)
T 3n98_A 115 YWKAINGDIIGKLRELQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFGMKPKGIWLPEC-AYRPAGEWE 193 (562)
T ss_dssp HHHHTTTCHHHHHHHHHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCSBEECGGG-CBCCSEEEE
T ss_pred HHHHhhhHHHHHHHHHHHCCCEEEEcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCCCCCEEECccc-ceeCccccc
Confidence 34556899999999999999999999999999888775 8999999999999999999999999999999 9998
Q ss_pred ----------hhHHHHHhhcCCcEEEEe
Q 004057 179 ----------VQAYLLGVELGFDSVHFA 196 (776)
Q Consensus 179 ----------~~p~il~~~~G~~~~v~~ 196 (776)
.+..+|+ ++||+++++.
T Consensus 194 ~~~~~~~~~~~i~~~L~-~~Gi~y~~vd 220 (562)
T 3n98_A 194 LPGGRKVKRQGIEKFLE-EFGLRYFFVE 220 (562)
T ss_dssp CGGGCEEEECCHHHHHH-TTTCCEEEEC
T ss_pred cccccccchhhHHHHHH-HcCCeEEEEC
Confidence 9999997 9999999984
No 11
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=98.98 E-value=8.4e-08 Score=108.37 Aligned_cols=146 Identities=12% Similarity=0.088 Sum_probs=112.5
Q ss_pred eEEEEEeccccCCc-----c-chhhhhheecCCccchhHHHHHHHHHHHHHHHcCCCCcEEEehhHHHHHHHhh------
Q 004057 41 LNVHLVAHSHDDVG-----W-LKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVG------ 108 (776)
Q Consensus 41 ~~v~~v~HsH~D~g-----W-l~t~~~y~~~~~~~i~~~~v~~~l~~vl~~l~~~p~~~F~~~e~~~~~~w~~~------ 108 (776)
..|.+|-|.|+-.- | ....+-.+ ....+.+-.++..|++.|++|++++=...+.++++.
T Consensus 3 ~~l~lvlH~HqP~~~~~~~~~~~~e~W~~---------~~~~~~Y~pll~~l~~~~~~k~t~~lSP~LleqL~d~~l~~r 73 (528)
T 2b5d_X 3 GKILIFLHAHLPYVHHPEYDHFLEERWLF---------EAITETYIPLLMMFDEIEDFRLTMSITPPLMEMLSSRDLQEK 73 (528)
T ss_dssp EEEEEEEEECCCCCCCTTCSSCTTHHHHH---------HHHHHTHHHHHHHHHHSSCCCEEEEECHHHHHHHHCHHHHHH
T ss_pred eeEEEEEECCCCCccCCCCCCcCcChHHH---------HHHHHHHHHHHHHHHhCcCccEEEEECHHHHHHHhChhhhhh
Confidence 67889999998651 1 11111111 245566667888899999988666543434444442
Q ss_pred ----------------------------------------------cChHHHHHHHHHHHcCcEEEEcceeeeecccCCC
Q 004057 109 ----------------------------------------------QSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTH 142 (776)
Q Consensus 109 ----------------------------------------------~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~ 142 (776)
..++...++|+|++.|++|++++++.-+=..+..
T Consensus 74 ~~~~l~~~~~~~~~e~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~li~~~r~L~~~G~vEll~~~y~H~ilPLl~ 153 (528)
T 2b5d_X 74 YERHMEKLIELANKEVERTKKEHPLKHKMAKFYREHFEKILNVFRSYDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQ 153 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGT
T ss_pred HHHHHHHHHHHHhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHCCCEEEEcCchhhHHHHhcC
Confidence 2233447789999999999999999888766656
Q ss_pred --HHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCChhhHHHHHhhcCCcEEEEee
Q 004057 143 --YVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFAR 197 (776)
Q Consensus 143 --~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG~s~~~p~il~~~~G~~~~v~~R 197 (776)
.|+...|+..|.+.+++.||..|+..|+|.+ +.+..+..+|+ ++||+++++.-
T Consensus 154 d~~ed~~~QI~~g~~~~~~~FG~~P~G~WlpE~-a~~~~l~~~l~-~~Gi~y~i~d~ 208 (528)
T 2b5d_X 154 MYPEVVNAQITVGVKNYEKHMKKHPRGIWLAEC-GYYQGLDLYLA-QNNVEYFFVDS 208 (528)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHSSCCSEEECGGG-CBCTTHHHHHH-HTTCCEEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCCCEEECchh-ccChhHHHHHH-HcCCeEEEECc
Confidence 8999999999999999999999999999987 99999999997 99999999954
No 12
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=96.47 E-value=0.27 Score=51.16 Aligned_cols=277 Identities=13% Similarity=0.050 Sum_probs=151.9
Q ss_pred cCCCCccCCeeEEEEEeccccCCccchhhhhheec-CCccchhHHHHHHHHHHHHHHHcCC-CCcEEEehhHHHHHHHhh
Q 004057 31 NTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVG-SNNSIQSACVENVLDSVVEALRRDP-NRKFVFAEMAFFHRWWVG 108 (776)
Q Consensus 31 ~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~~y~~~-~~~~i~~~~v~~~l~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~ 108 (776)
+...+...+++-|.++-..--..+|+......-.. .........-+.-+..++++|+++. ..+|...+.. .+
T Consensus 15 ~~~~wP~g~r~av~~~~d~e~~~~~~~~~~~~~~~~~~~s~~~yG~~~~~~rll~ll~~~~v~aTfFv~g~~------~~ 88 (300)
T 3rxz_A 15 APVSWPDGKTCAVAFTFDVDAESPLLTTDPAFADRMGTMSHQAYGPLVGVPRLLGILDEFNVPGTFFVPGYT------AH 88 (300)
T ss_dssp CCCCCSTTCCEEEEEEEECCTTHHHHHHCGGGGGCHHHHHHHHHHHHTHHHHHHHHHHHTTCCEEEEECHHH------HH
T ss_pred CCCCCCCCCEEEEEEEECCCCCccccCCCCccccCcccccccccCcHHHHHHHHHHHHHcCCCEEEEEEHHH------Hh
Confidence 34444455667777776654344454322111000 0000000123567888999999884 3345554332 23
Q ss_pred cChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC-CChhhHHHHHhh
Q 004057 109 QSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFG-HSAVQAYLLGVE 187 (776)
Q Consensus 109 ~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG-~s~~~p~il~~~ 187 (776)
.+| +.+|+++++| .||-+=+|.-.+....+.+.+.++|..+.+.+++.+|..|+ +|-+ |+| ++..+..+++ +
T Consensus 89 ~~p---~~v~~~~~~G-hEIg~H~~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~-~fr~-P~g~~~~~~~~~l~-e 161 (300)
T 3rxz_A 89 RHP---EPIRSIARAG-HEIAHHGYLHESLVGADEDTERKILTRGIEALEEVAGVHPV-GYRA-PMWEMNWHTPKLLA-E 161 (300)
T ss_dssp HSH---HHHHHHHHTT-CEEEECCSSCCCCTTCCHHHHHHHHHHHHHHHHHHHSCCCC-EECC-GGGCCCTTHHHHHH-H
T ss_pred hCH---HHHHHHHHcC-CEEEecCCCCcccccCCHHHHHHHHHHHHHHHHHHhCCCCc-EEEC-CCCCCCHHHHHHHH-H
Confidence 355 6788889999 78888899777777779999999999999999999999876 3544 455 5778899997 9
Q ss_pred cCCcEEEEeecchhhhhhhccCCceeEEEEcCCCCCCCCeeEEeecCCCCCC-CC-CCCcc-cCCCCCCCCCCCCCcccc
Q 004057 188 LGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSP-PS-GFHFE-LTDDFDPVQDNPLLDGYN 264 (776)
Q Consensus 188 ~G~~~~v~~R~~~~~~~~~~~~~~~eF~W~g~d~~~~gs~v~t~~~~~~Y~~-~~-~~~~~-~~~~~~~~~~~~~~~~~n 264 (776)
+||.+..-.+.+. ..|+-.. + +..++ .+|.++.. .. .|.+. .... + ... .+
T Consensus 162 ~G~~ydss~~~~~-----------~Py~~~~-~----~~~l~--~iP~~~~~~D~~~~~~~~~~~~-~---~~~----~~ 215 (300)
T 3rxz_A 162 FGFLYDSTLMDSD-----------HPYELAV-G----DGSLV--ELPVSWALDDWQQYCFVPDFSG-T---GLI----ET 215 (300)
T ss_dssp TTCSEECCCCSCS-----------SCEEBCC-T----TSCCE--ECCCCGGGBSHHHHCCBTTTBC-S---SCC----CC
T ss_pred cCCEEEeeccCCC-----------CceEeec-C----CCCeE--EEeeeeecCCcHhhhccccccc-C---CCC----CC
Confidence 9999876655431 1222111 1 22222 23432210 00 00000 0000 0 000 12
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeeEEeccCCccCCchhhHHHHHHHHHHHHhcCCceeEEEcChHHHHHHHHhCC-CCCC
Q 004057 265 VEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAAN-GPWP 343 (776)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~~~~a~~~~~~~~~li~~~n~~~~~~i~~sT~~~yf~~~~~~~-~~~p 343 (776)
.++..+.+.+.+... |..+. ++.++.+....+.......++++++++.+.+ .+.+.|.++..+...+.. ...+
T Consensus 216 ~~~~~~~~~~~fd~~---~~~g~-~~~i~~H~~~~g~p~~~~~l~~~l~~~~~~~--~V~~~t~~eia~~~~~~~~~~~~ 289 (300)
T 3rxz_A 216 PAKAIELWRAELNAM---RDIGG-AWVLTNHPFLSGRPGRAAALREFIAEVCAMD--DVWVAGMSQIAEHVRAQKLTPRT 289 (300)
T ss_dssp HHHHHHHHHHHHHHH---HHHTC-EEEEEECHHHHTSHHHHHHHHHHHHHHHTCT--TEEECCHHHHHHHHHHTCCCCBC
T ss_pred HHHHHHHHHHHHHHH---HHcCC-eEEEEEChhhcCCHHHHHHHHHHHHHHHhCC--CEEEEcHHHHHHHHHhhcCCCcc
Confidence 222233333332211 11111 2333332222122234678899999998764 478999999988876643 4566
Q ss_pred CccCCcccc
Q 004057 344 LKTDDYFPY 352 (776)
Q Consensus 344 ~~~gD~~py 352 (776)
+..||+.|.
T Consensus 290 v~~~~~~~~ 298 (300)
T 3rxz_A 290 LTRPELTPV 298 (300)
T ss_dssp CCCCCCC--
T ss_pred ccCcccccC
Confidence 778888764
No 13
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=95.95 E-value=0.69 Score=48.61 Aligned_cols=222 Identities=13% Similarity=0.121 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHH
Q 004057 76 ENVLDSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGH 154 (776)
Q Consensus 76 ~~~l~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~ 154 (776)
+.-+..++++|+++- ..+|...+.. .+.+| +.+++++++| .||-+=+|.-.+-...+.+.+.++|..+.
T Consensus 85 ~~~~~rll~lL~~~~v~aTfFv~g~~------~~~~p---~~v~~i~~~G-hEIg~H~~~H~~~~~ls~~~~~~ei~~~~ 154 (321)
T 3s6o_A 85 RAGVWRILREFDKRGLPLTVFGVGMA------IERHP---ELARAFVELG-HEIACHGWRWIHYQDMTPEREAEHMRLGM 154 (321)
T ss_dssp HTHHHHHHHHHHHHTCCCEEEECHHH------HHHCH---HHHHHHHHTT-CEEEECCSSCSCCTTCCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHcCCCEEEEEEHHH------hhhCH---HHHHHHHHcC-CEEeeCCccccccccCCHHHHHHHHHHHH
Confidence 456778899998864 4556655432 23456 4688889999 78888888777766778999999999999
Q ss_pred HHHHHHcCCCCcceeecCCCCCChhhHHHHHhhcC-CcEEEEeecchhhhhhhccCCceeEEEEcCCCCCCCCeeEEeec
Q 004057 155 HYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG-FDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAF 233 (776)
Q Consensus 155 ~~l~~~fG~~~~~~w~~D~FG~s~~~p~il~~~~G-~~~~v~~R~~~~~~~~~~~~~~~eF~W~g~d~~~~gs~v~t~~~ 233 (776)
+.|++..|..|+ +|. .-.++..+..+|+ ++| |.+..-.+.+. ..|+-+..+.. |...-...+
T Consensus 155 ~~l~~~~G~~p~-g~r--~g~~s~~t~~ll~-e~G~f~Ydss~~~dd-----------~Py~~~~~~~~--g~~~~l~~i 217 (321)
T 3s6o_A 155 EAIERVTGVRPL-GWY--TGRDSPNTHRLVA-EYGGFLYDSDHYGDD-----------LPFWMDVEVSG--GASVPQLIV 217 (321)
T ss_dssp HHHHHHHSCCCC-EEC--CSSCCTTHHHHHH-HHCCCSEECCCCSCS-----------SCEEEEEECTT--SCEEEEEEC
T ss_pred HHHHHHhCCCcc-cEE--CCCCCHHHHHHHH-HcCCeEEEEeccCCC-----------CCcceeccCcC--CCCCCEEEE
Confidence 999999998876 455 3347788999997 999 99887655331 13432321211 331112235
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcccCCCCeeEEeccCCccCCchhhHHHHHHHHHH
Q 004057 234 PVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIH 313 (776)
Q Consensus 234 ~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~~~~a~~~~~~~~~li~ 313 (776)
|...... .+.|. ..... .+-++..+.+.+.+...-........++.++-.............++++++
T Consensus 218 P~t~~~~-D~~~~---------~~~g~--~~~~~~~~~l~~~Fd~~y~eg~~ap~~~~i~lH~~~~g~p~r~~~le~fL~ 285 (321)
T 3s6o_A 218 PYTLDAN-DMRFA---------TPQGF--NTADHFFHYLRDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLD 285 (321)
T ss_dssp CCCSSSB-GGGGS---------SSSCC--CSHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEETTTTTSHHHHHHHHHHHH
T ss_pred eEeeeeC-Ceeee---------cCCCC--CCHHHHHHHHHHHHHHHHHhCCCCCceEEEEeChHHcCCHHHHHHHHHHHH
Confidence 5321100 00010 00000 112222333333333210001111124444432222222223578899999
Q ss_pred HHhcCCceeEEEcChHHHHHHHHhC
Q 004057 314 YVNKGGRVNALYSTPSLYTEAKNAA 338 (776)
Q Consensus 314 ~~n~~~~~~i~~sT~~~yf~~~~~~ 338 (776)
++.+.. .|.+.|..+..+...+.
T Consensus 286 ~i~~~~--~Vw~~t~~eia~~~~~~ 308 (321)
T 3s6o_A 286 HIERHD--RVWVARRVEIARHWREH 308 (321)
T ss_dssp HHHTCS--SEEECCHHHHHHHHHHH
T ss_pred HHHhCC--CEEEEcHHHHHHHHHhh
Confidence 998764 47889999988876654
No 14
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=95.61 E-value=0.56 Score=48.99 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHH
Q 004057 77 NVLDSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHH 155 (776)
Q Consensus 77 ~~l~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~ 155 (776)
..+..+++.|+++. ..+|...+... +.+| +.+|+++++| .||-+=+|.-.+-...+.+.+.++|..+.+
T Consensus 81 ~~~~~ll~iL~~~~v~aTfFv~g~~~------~~~p---~~v~~i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~ 150 (308)
T 3cl6_A 81 AGVWRILKLFKAFDIPLTIFAVAMAA------QRHP---DVIRAMVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIR 150 (308)
T ss_dssp THHHHHHHHHHHTTCCCEEEECHHHH------HHCH---HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEeEHHHH------HHCH---HHHHHHHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHH
Confidence 45778999999884 35566554322 2355 5788889999 788888997666666789999999999999
Q ss_pred HHHHHcCCCCcceeecCCCCCChhhHHHHHhhcC-CcEEEEee
Q 004057 156 YIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG-FDSVHFAR 197 (776)
Q Consensus 156 ~l~~~fG~~~~~~w~~D~FG~s~~~p~il~~~~G-~~~~v~~R 197 (776)
.+++.+|..|+ +|.+ + .++..+..+++ +.| |.+..-.+
T Consensus 151 ~l~~~~G~~p~-g~r~-~-~~~~~~~~~l~-~~G~~~y~ss~~ 189 (308)
T 3cl6_A 151 ILTELTGERPL-GWYT-G-RTGPNTRRLVM-EEGGFLYDCDTY 189 (308)
T ss_dssp HHHHHHSSCCS-EECC-S-SCCTTHHHHHH-HHCCCSEECCCC
T ss_pred HHHHHhCCCcc-eEEC-C-CCCHHHHHHHH-HCCCceEEeccC
Confidence 99999998876 5664 2 56788999997 999 98876554
No 15
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=95.39 E-value=1.4 Score=46.35 Aligned_cols=110 Identities=20% Similarity=0.243 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHH
Q 004057 75 VENVLDSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLG 153 (776)
Q Consensus 75 v~~~l~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G 153 (776)
-+..+..++++|+++- ..+|...+... +.+| +.+|+++++|- ||.+=+|.-.+-..-+.+.+.++|..+
T Consensus 72 ~~~~~~rlL~lL~~~~v~aTfFv~g~~~------~~~p---~~v~~i~~~Gh-EIg~H~~~H~~~~~~s~~~~~~ei~~~ 141 (326)
T 3qbu_A 72 GEVGIPRLLKLFKKYHLPATWFVPGHSI------ETFP---EQMKMIVDAGH-EVGAHGYSHENPIAMSTKQEEDVLLKS 141 (326)
T ss_dssp HHTHHHHHHHHHHHTTCCCEEECCHHHH------HHCH---HHHHHHHTTTC-EEEBCCSSCCCGGGSCHHHHHHHHHHH
T ss_pred cHHhHHHHHHHHHHcCCCEEEEEEhHHh------hhCH---HHHHHHHHcCC-EEEeCCCCCcChhhCCHHHHHHHHHHH
Confidence 3456788999999874 34565544322 2345 56888889997 888888976666677899999999999
Q ss_pred HHHHHHHcCCCCcceeecCCCC-CChhhHHHHHhhcCCcEEEEee
Q 004057 154 HHYIKQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDSVHFAR 197 (776)
Q Consensus 154 ~~~l~~~fG~~~~~~w~~D~FG-~s~~~p~il~~~~G~~~~v~~R 197 (776)
.+.+++.+|..|+ +|-+ |+| .+..+..+++ ++||.+..-.+
T Consensus 142 ~~~l~~~~G~~p~-~fr~-P~g~~~~~~~~~l~-e~G~~ydss~~ 183 (326)
T 3qbu_A 142 VELIKDLTGKAPT-GYVA-PWWEFSNITNELLL-KHGFKYDHSLM 183 (326)
T ss_dssp HHHHHHHHSSCCC-EECC-GGGCCSSHHHHHHH-TTTCCEECCCC
T ss_pred HHHHHHHHCCCCc-EEEC-CCCCCCHHHHHHHH-HcCCEEEeecc
Confidence 9999999998876 3444 454 5678889997 99999855433
No 16
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=93.61 E-value=0.25 Score=47.87 Aligned_cols=101 Identities=21% Similarity=0.236 Sum_probs=75.9
Q ss_pred HHHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHH
Q 004057 79 LDSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYI 157 (776)
Q Consensus 79 l~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l 157 (776)
...+++.|+++. ..+|...+.. .+.+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|....+.+
T Consensus 19 ~~~il~iL~~~~v~aTfFv~g~~------~~~~~---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 88 (195)
T 2cc0_A 19 TQSLLNALRQNGLRATMFNQGQY------AAQNP---SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAI 88 (195)
T ss_dssp HHHHHHHHHHTTCCCEEEECHHH------HHHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecChh------hhhCH---HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHH
Confidence 556777787764 4556655432 12345 5788899999 78888999877777778999999999999999
Q ss_pred HHHcCCCCcceeecCCCCC-ChhhHHHHHhhcCCcE
Q 004057 158 KQHFNKTPKAGWQIDPFGH-SAVQAYLLGVELGFDS 192 (776)
Q Consensus 158 ~~~fG~~~~~~w~~D~FG~-s~~~p~il~~~~G~~~ 192 (776)
++..|..|+ +.-=|+|. +..+..+++ ++|+..
T Consensus 89 ~~~~G~~~~--~fr~P~G~~~~~~~~~~~-~~G~~~ 121 (195)
T 2cc0_A 89 AGAGGGTPK--LFRPPYGETNATLRSVEA-KYGLTE 121 (195)
T ss_dssp HHTTSCCCS--EECCGGGCCCHHHHHHHH-HTTCEE
T ss_pred HHHhCCCCC--EEECCCCCcCHHHHHHHH-HCCCeE
Confidence 999998875 34447885 557778887 899875
No 17
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=92.93 E-value=0.41 Score=47.73 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=75.6
Q ss_pred HHHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHH
Q 004057 79 LDSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYI 157 (776)
Q Consensus 79 l~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l 157 (776)
...+++.|+++. ..+|...+.. + +.+| +.+|+++++| .||-+=+|.-++....+.+.+.++|..+.+.+
T Consensus 47 ~~~il~iL~~~~v~ATfFv~g~~-~-----~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 116 (230)
T 2y8u_A 47 TPQLLDLLSRYSARATFFVLGDA-A-----AQNP---GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVI 116 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEECHHH-H-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecHH-H-----hHCH---HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 346677777664 4556655432 1 2244 6789999999 78888999877777778999999999999999
Q ss_pred HHHcCCCCcceeecCCCC-CChhhHHHHHhhcCCcE
Q 004057 158 KQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDS 192 (776)
Q Consensus 158 ~~~fG~~~~~~w~~D~FG-~s~~~p~il~~~~G~~~ 192 (776)
++..|..|+ +.-=|+| ++..+..+++ ++|+..
T Consensus 117 ~~~~G~~~~--~fr~P~G~~~~~~~~~l~-~~G~~~ 149 (230)
T 2y8u_A 117 RPALGVAPA--YMRPPYLETNELVLQVMR-DLDYRV 149 (230)
T ss_dssp HHHHSSCBS--EECCGGGCCCHHHHHHHH-HTTCEE
T ss_pred HHHhCCCCc--EEECCCCCCCHHHHHHHH-HcCCEE
Confidence 999998765 3444787 4667788887 899875
No 18
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=92.42 E-value=0.25 Score=50.18 Aligned_cols=101 Identities=11% Similarity=0.028 Sum_probs=74.0
Q ss_pred HHHHHHHHcCC-CCcE-EEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeee--ecccCCCHHHHHHHHHHHHH
Q 004057 80 DSVVEALRRDP-NRKF-VFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCM--HDEATTHYVDMIDQTTLGHH 155 (776)
Q Consensus 80 ~~vl~~l~~~p-~~~F-~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~--~De~~~~~es~irql~~G~~ 155 (776)
..+++.|+++. ..+| ...+.. .+.+|+ +.+|+++++| .||-+=+|.- ++-...+.+.+.+++....+
T Consensus 42 ~~il~iL~~~~v~ATF~Fv~g~~------~~~~p~--~~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~ 112 (254)
T 2vyo_A 42 DRILNTLDELGVKATFSFTVNQK------AVGNVG--QLYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREID 112 (254)
T ss_dssp HHHHHHHHHHTCCCEEEECCSSC------CCGGGT--HHHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEccChH------HhHCHH--HHHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHH
Confidence 35566666553 4557 544321 233453 3788999999 7888889977 67666789999999999999
Q ss_pred HHHHHcCCCCcceeecCCC--C-CChhhHHHHHhhcCCcE
Q 004057 156 YIKQHFNKTPKAGWQIDPF--G-HSAVQAYLLGVELGFDS 192 (776)
Q Consensus 156 ~l~~~fG~~~~~~w~~D~F--G-~s~~~p~il~~~~G~~~ 192 (776)
.+++..|..|+ +.-=|+ | ++..+..+++ +.|+..
T Consensus 113 ~l~~~~G~~~~--~fr~P~~~G~~~~~~~~~l~-~~G~~~ 149 (254)
T 2vyo_A 113 TIDGLSGTEIR--YAAVPICNGQVNSEMYNILT-ERGVLP 149 (254)
T ss_dssp HHHHHHTSCCC--EEECCCBTTEECHHHHHHHH-TTTCEE
T ss_pred HHHHHHCCCCe--EEeCCccCCCCCHHHHHHHH-HCCCEE
Confidence 99999998775 344577 7 4677888887 899874
No 19
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=91.84 E-value=0.62 Score=46.95 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=74.0
Q ss_pred HHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHHH
Q 004057 81 SVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQ 159 (776)
Q Consensus 81 ~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~~ 159 (776)
.+++.|+++. ..+|...+.. .+.+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.+++
T Consensus 72 ~il~iL~~~~v~ATfFv~g~~------~~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~ 141 (247)
T 2j13_A 72 KILDVLKEKKVPATFFVTGHY------IKTQK---DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKK 141 (247)
T ss_dssp HHHHHHHHHTCCEEEEECHHH------HHHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeChh------hhhCH---HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHH
Confidence 4566666553 4456554431 22345 5788999999 7888889987777777899999999999999999
Q ss_pred HcCCCCcceeecCCCC-CChhhHHHHHhhcCCcEE
Q 004057 160 HFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDSV 193 (776)
Q Consensus 160 ~fG~~~~~~w~~D~FG-~s~~~p~il~~~~G~~~~ 193 (776)
.+|..+.. |..=|+| ++..+..+++ ++|+..+
T Consensus 142 ~~G~~~~~-~fr~P~G~~~~~~~~~l~-~~G~~~v 174 (247)
T 2j13_A 142 VTGQKEVK-YVRPPRGVFSERTLALTK-EMGYYNV 174 (247)
T ss_dssp HHCCSCCC-EECCGGGEECHHHHHHHH-HTTCEEE
T ss_pred HhCCCCCc-EEeCCCCCCCHHHHHHHH-HCCCEEE
Confidence 99987333 3444778 4677888887 9999864
No 20
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=91.00 E-value=1 Score=45.06 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=73.7
Q ss_pred HHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHHH
Q 004057 81 SVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQ 159 (776)
Q Consensus 81 ~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~~ 159 (776)
.+++.|+++. ..+|...+.. .+.+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.+++
T Consensus 60 ~il~iL~~~~v~ATfFv~g~~------~~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~ 129 (240)
T 1ny1_A 60 KVLDVLKKHRVTGTFFVTGHF------VKDQP---QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYK 129 (240)
T ss_dssp HHHHHHHHTTCCCEEEECHHH------HHHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeChh------hhhCH---HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHHH
Confidence 4667776663 4556555432 12345 5788899999 7888899987777777899999999999999999
Q ss_pred HcCCC-CcceeecCCCC-CChhhHHHHHhhcCCcE
Q 004057 160 HFNKT-PKAGWQIDPFG-HSAVQAYLLGVELGFDS 192 (776)
Q Consensus 160 ~fG~~-~~~~w~~D~FG-~s~~~p~il~~~~G~~~ 192 (776)
..|.. |+ .| .=|+| ++..+..+++ ++|+..
T Consensus 130 ~~G~~~~~-~f-r~P~G~~~~~~~~~l~-~~G~~~ 161 (240)
T 1ny1_A 130 ITGKQDNL-YL-RPPRGVFSEYVLKETK-RLGYQT 161 (240)
T ss_dssp HHSCCCCC-EE-CCGGGEECHHHHHHHH-HTTCEE
T ss_pred HhCCCCCc-EE-eCCCCCCCHHHHHHHH-HcCCEE
Confidence 99987 54 34 44788 4677888887 999875
No 21
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=90.20 E-value=0.62 Score=47.17 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=75.3
Q ss_pred HHHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHH
Q 004057 79 LDSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYI 157 (776)
Q Consensus 79 l~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l 157 (776)
...+++.|+++. ..+|...+..+ .. .+ .....+.+|+++++| .||-+=+|.-++....+.+.+.++|..+.+.+
T Consensus 56 ~~~il~iL~~~~vkATFFv~g~~~--g~-~~-~~~~p~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 130 (254)
T 2iw0_A 56 TPQLLDILKQNDVRATFFVNGNNW--AN-IE-AGSNPDTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEAT 130 (254)
T ss_dssp HHHHHHHHHHHTCCCEEEECSBSS--SB-TT-STTHHHHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc--cc-cc-cccCHHHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 345666666653 45565554321 00 01 012337899999999 78888999877777778999999999999999
Q ss_pred HHHcCCCCcceeecCCCC-CChhhHHHHHhhcCCcE
Q 004057 158 KQHFNKTPKAGWQIDPFG-HSAVQAYLLGVELGFDS 192 (776)
Q Consensus 158 ~~~fG~~~~~~w~~D~FG-~s~~~p~il~~~~G~~~ 192 (776)
++..|..|+ +.-=|+| ++..+..+++ ++|+..
T Consensus 131 ~~~~G~~~~--~fr~P~G~~~~~~~~~l~-~~G~~~ 163 (254)
T 2iw0_A 131 RRIDGFAPK--YMRAPYLSCDAGCQGDLG-GLGYHI 163 (254)
T ss_dssp HHHHSCEES--EECCGGGCCCHHHHHHHH-HTTCEE
T ss_pred HHHhCCCCC--EEECCCCCCCHHHHHHHH-HcCCeE
Confidence 999998765 3445787 4667888887 899875
No 22
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=80.33 E-value=3.9 Score=40.01 Aligned_cols=94 Identities=16% Similarity=0.199 Sum_probs=66.8
Q ss_pred HHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHH
Q 004057 80 DSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIK 158 (776)
Q Consensus 80 ~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~ 158 (776)
..+++.|+++. ..+|...+... +.+|+ +.+|+++++| .||-+=+|.-++....+.+.+.++|..+.+.++
T Consensus 21 ~~il~iL~~~~v~ATfFv~g~~~------~~~p~--~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 91 (216)
T 2c71_A 21 ARVLDKLDKYNVKATFMVVGQRV------NDSTA--AIIRRMVNSG-HEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQ 91 (216)
T ss_dssp HHHHHHHHHHTCCCEEEECGGGC------SHHHH--HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEChhh------hhCHH--HHHHHHHHCC-CEEeeCCcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 46777777654 45565554322 11232 4899999999 788889998777767789999999999999999
Q ss_pred HHcCCCCcceeecCCCCCCh-hhHHHH
Q 004057 159 QHFNKTPKAGWQIDPFGHSA-VQAYLL 184 (776)
Q Consensus 159 ~~fG~~~~~~w~~D~FG~s~-~~p~il 184 (776)
+..|..|+ +.-=|+|... .+..++
T Consensus 92 ~~~G~~~~--~fr~P~G~~~~~~~~~l 116 (216)
T 2c71_A 92 KYAGTTPK--FFRPPNLETSPTLFNNV 116 (216)
T ss_dssp HHHSCCCS--EECCGGGCCCHHHHHHC
T ss_pred HhhCCCCe--EEECCCCCCCHHHHHHH
Confidence 99998876 3444888643 333443
No 23
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=79.30 E-value=6 Score=40.12 Aligned_cols=82 Identities=17% Similarity=0.281 Sum_probs=62.3
Q ss_pred HHHHHHHHHcCcEEEEcceeeeecccC-----------------------CC----HHHHHHHHHHHHHHHHHHcCCCCc
Q 004057 114 QEQVRKLVDASQLEFVNGGWCMHDEAT-----------------------TH----YVDMIDQTTLGHHYIKQHFNKTPK 166 (776)
Q Consensus 114 ~~~vk~lv~~Grle~v~G~wv~~De~~-----------------------~~----~es~irql~~G~~~l~~~fG~~~~ 166 (776)
.+.+|+++++|-+||-+=+|..+.-.. .+ .+.+.+++....+.|.+.+|..|+
T Consensus 126 ~~~lr~m~~~G~~eIgsHT~~hH~~~~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~~~~G~~~~ 205 (268)
T 3vus_A 126 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 205 (268)
T ss_dssp HHHHHHHHHTTSEEECBCCSSCCSBCCCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHCCCeEEecCccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 478999999999998777886443110 12 355778899999999999999876
Q ss_pred ceeecCCCCC-ChhhHHHHHhhcCCcEEEEeec
Q 004057 167 AGWQIDPFGH-SAVQAYLLGVELGFDSVHFARI 198 (776)
Q Consensus 167 ~~w~~D~FG~-s~~~p~il~~~~G~~~~v~~R~ 198 (776)
+..=|||. +..+-.+++ ++|++.++..+.
T Consensus 206 --~fr~PyG~~n~~~~~~~~-~~Gy~~a~t~~~ 235 (268)
T 3vus_A 206 --VFVWPYGEANGIAIEELK-KLGYDMFFTLES 235 (268)
T ss_dssp --EEECGGGCCCHHHHHHHH-HTTCCEEECCCS
T ss_pred --EEEeCCCcCCHHHHHHHH-HCCCcEEEEecC
Confidence 33449994 777888887 999999887553
No 24
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=78.90 E-value=3.6 Score=46.90 Aligned_cols=82 Identities=17% Similarity=0.287 Sum_probs=62.8
Q ss_pred HHHHHHHHHcCcEEEEcceeeeeccc------------C-----------CC----HHHHHHHHHHHHHHHHHHcCCCCc
Q 004057 114 QEQVRKLVDASQLEFVNGGWCMHDEA------------T-----------TH----YVDMIDQTTLGHHYIKQHFNKTPK 166 (776)
Q Consensus 114 ~~~vk~lv~~Grle~v~G~wv~~De~------------~-----------~~----~es~irql~~G~~~l~~~fG~~~~ 166 (776)
.+.+|++.++|-+||-+=+|..|--. + .+ .+.+.++|....+.|.+.+|..|+
T Consensus 130 w~qlrem~~sG~~EIGsHT~shH~~l~~~p~G~~~Pa~l~r~~~~~~~~~es~~e~~~~i~~EL~~Sk~~Le~~lG~~~~ 209 (618)
T 4f9d_A 130 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 209 (618)
T ss_dssp HHHHHHHHHHTSEEECBCCSSCCSEEECSTTCCEEEGGGSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHCCCcEEeecccccccccccccccccccchhcccccccccccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 48899999999999777777633110 0 01 256899999999999999999877
Q ss_pred ceeecCCCC-CChhhHHHHHhhcCCcEEEEeec
Q 004057 167 AGWQIDPFG-HSAVQAYLLGVELGFDSVHFARI 198 (776)
Q Consensus 167 ~~w~~D~FG-~s~~~p~il~~~~G~~~~v~~R~ 198 (776)
. ..=||| ++...-.+++ ++|++.++..+.
T Consensus 210 ~--FayPyG~~n~~~~~~ak-e~Gy~~afTt~~ 239 (618)
T 4f9d_A 210 V--FVWPYGEANGIAIEELK-KLGYDMFFTLES 239 (618)
T ss_dssp E--EECGGGCCCHHHHHHHH-HTTCCEEECCCS
T ss_pred E--EEcCCCCCCHHHHHHHH-HcCCEEEEEecC
Confidence 3 344999 5788889997 999999887553
No 25
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=77.06 E-value=5.1 Score=43.68 Aligned_cols=97 Identities=14% Similarity=0.192 Sum_probs=71.9
Q ss_pred HHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHH
Q 004057 80 DSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIK 158 (776)
Q Consensus 80 ~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~ 158 (776)
..+++.|+++. ..+|...+.. .+.+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|.
T Consensus 252 ~~il~iL~k~~vkATFFvig~~------i~~~p---~~lr~m~~~G-heIgnHT~sH~~l~~ls~~~~~~EI~~s~~~L~ 321 (431)
T 2c1i_A 252 PQVLETLAKYDIKATFFVLGKN------VSGNE---DLVKRIKSEG-HVVGNHSWSHPILSQLSLDEAKKQITDTEDVLT 321 (431)
T ss_dssp HHHHHHHHHTTCCCEEEECGGG------TTTCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEEECcc------ccCCH---HHHHHHHHCC-CEEeecCCCCcccccCCHHHHHHHHHHHHHHHH
Confidence 46788888764 3455554432 23455 6788999999 788889998777666789999999999999999
Q ss_pred HHcCCCCcceeecCCCCCChhhHHHHHhhcCCc
Q 004057 159 QHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFD 191 (776)
Q Consensus 159 ~~fG~~~~~~w~~D~FG~s~~~p~il~~~~G~~ 191 (776)
+..|..|+ +|. =|||... +.+++ .+|+.
T Consensus 322 ~~~G~~~~-~fr-~PyG~~n--~~v~~-~~G~~ 349 (431)
T 2c1i_A 322 KVLGSSSK-LMR-PPYGAIT--DDIRN-SLDLS 349 (431)
T ss_dssp HHHSCCCC-EEC-CGGGCCC--HHHHH-TSSCE
T ss_pred HhhCCCCe-EEE-CCCCCCC--HHHHH-HCCCe
Confidence 99998765 344 4899754 56676 77865
No 26
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=70.46 E-value=8.3 Score=40.02 Aligned_cols=102 Identities=10% Similarity=0.167 Sum_probs=70.6
Q ss_pred HHHHHHHHHcCC-CCcEEEehhHHHHHHHhhcChHHHHHHHHHHHcCcEEEEcceeeeeccc-----CCCHHHHHHHHHH
Q 004057 79 LDSVVEALRRDP-NRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEA-----TTHYVDMIDQTTL 152 (776)
Q Consensus 79 l~~vl~~l~~~p-~~~F~~~e~~~~~~w~~~~~p~~~~~vk~lv~~Grle~v~G~wv~~De~-----~~~~es~irql~~ 152 (776)
...+++.|+++. ..+|...+... ...+| +.+|+++++| .||-+=+|.-++.. ..+.+.+.++|..
T Consensus 122 t~~iLdiL~~~~vkATFFv~G~~i-----~~~~p---~~vr~i~~~G-heIgnHt~sH~~~~~~~~~~ls~~~~~~Ei~~ 192 (311)
T 2w3z_A 122 TPKILDVLAQQHVHATFFLVGCNI-----TDKVK---PILQRQITEG-HALGIHSFSHVYSLLYPNRVGNTQQIVSEVTR 192 (311)
T ss_dssp HHHHHHHHHHTTCCCEEEECGGGC-----CGGGH---HHHHHHHHTT-CEEEECCSSCCHHHHSGGGBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEEeChhh-----cccCH---HHHHHHHHCC-CeeeccCCccccccccccCCCCHHHHHHHHHH
Confidence 457788887764 45566554321 11134 6789999999 78888888655432 2378999999999
Q ss_pred HHHHHHHHcC--CCCcceeecCCCCCChh-----hHHHHHhhcCCcE
Q 004057 153 GHHYIKQHFN--KTPKAGWQIDPFGHSAV-----QAYLLGVELGFDS 192 (776)
Q Consensus 153 G~~~l~~~fG--~~~~~~w~~D~FG~s~~-----~p~il~~~~G~~~ 192 (776)
+.+.|++..| ..|+ .|- =|+|.... +..+++ ++|+..
T Consensus 193 ~~~~L~~~~G~~~~p~-~fR-~PyG~~~~~~~~~~~~~l~-~~G~~~ 236 (311)
T 2w3z_A 193 TQNALKDQLGQNFKTG-VWR-YPGGHLSWTGLEAADKQLA-AQGIQW 236 (311)
T ss_dssp HHHHHHHHHCTTBCCC-EEC-CTTCGGGCBCCHHHHHHHH-TTTCEE
T ss_pred HHHHHHHHhCCCCCCc-EEE-CCCCCcChhHHHHHHHHHH-HCCCEE
Confidence 9999999999 4444 344 48886542 456887 999876
No 27
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=50.62 E-value=5.9 Score=36.91 Aligned_cols=18 Identities=28% Similarity=0.440 Sum_probs=14.6
Q ss_pred cceeecCCCCCChhh-HHH
Q 004057 166 KAGWQIDPFGHSAVQ-AYL 183 (776)
Q Consensus 166 ~~~w~~D~FG~s~~~-p~i 183 (776)
+.||..|+||++|++ |.+
T Consensus 106 ~~G~v~D~fGv~W~i~~~~ 124 (163)
T 1u69_A 106 ACGWCRDKWGISWQITPRV 124 (163)
T ss_dssp STTEEECTTSCEEEEEEHH
T ss_pred EEEEEECCCCCEEEEEeEc
Confidence 678999999999983 444
No 28
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=48.50 E-value=51 Score=34.67 Aligned_cols=80 Identities=9% Similarity=0.033 Sum_probs=58.1
Q ss_pred HHHHHHHHHHcCcEEEEcceeeeecccCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCC-ChhhHHHHHhhcCCc
Q 004057 113 IQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGH-SAVQAYLLGVELGFD 191 (776)
Q Consensus 113 ~~~~vk~lv~~Grle~v~G~wv~~De~~~~~es~irql~~G~~~l~~~fG~~~~~~w~~D~FG~-s~~~p~il~~~~G~~ 191 (776)
..++||+|.++|-+||-+=+|.-++-.-.+ ..-++|....+.|.+.+|..++ +..=|||. +...-.+++ .|++
T Consensus 246 sw~qIrem~~~G~~eIGsHT~sH~~L~~ls--~~e~EI~~Sk~~Le~~lG~~v~--~FAYPyG~yn~~v~~~ak--~gy~ 319 (360)
T 4hd5_A 246 STSEIKEMVDSGIFSVQSHTATHADLPKIT--NYEEELKGSKEKLEKITGKPVI--AIAYXFGHVDDKVVTETK--KYYQ 319 (360)
T ss_dssp CHHHHHHHHHTTSEEEEECCSSCCCGGGCS--CHHHHHHHHHHHHHHHHSSCCC--EEECGGGCCCHHHHHHHT--TTCS
T ss_pred CHHHHHHHHHcCCceeeccCCcccccccCC--HHHHHHHHHHHHHHHHhCCCCc--EEEcCCCCCCHHHHHHHH--hCCc
Confidence 357799999999999777777655533222 2347899999999999999876 34459995 555566654 5899
Q ss_pred EEEEeec
Q 004057 192 SVHFARI 198 (776)
Q Consensus 192 ~~v~~R~ 198 (776)
.++..+.
T Consensus 320 ~AfTt~~ 326 (360)
T 4hd5_A 320 FATTTKP 326 (360)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 8887653
No 29
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=38.85 E-value=1.6e+02 Score=29.54 Aligned_cols=27 Identities=15% Similarity=0.290 Sum_probs=22.9
Q ss_pred CceEecCCeEEEEEECCCCceEEEEec
Q 004057 599 KTVEVGPGNLKMSFSRTTGQLKRMYNS 625 (776)
Q Consensus 599 ~~~~leN~~~~v~~~~~~G~i~sl~dk 625 (776)
..+.|+|+.++++|+...|.|.++.-|
T Consensus 4 ~~i~v~td~l~~~is~~GG~I~~~~Lk 30 (280)
T 3bs6_A 4 KLISVKTDVLDLTINTRGGDVEQALLP 30 (280)
T ss_dssp CEEEEECSSCEEEEETBTTEEEEEEEE
T ss_pred CEEEEECCcEEEEEECCCCeEeeeEcC
Confidence 357899999999999888999987654
No 30
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=35.26 E-value=1.5e+02 Score=30.53 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=23.8
Q ss_pred CCceEecCCeEEEEEECCCCceEEEEec
Q 004057 598 DKTVEVGPGNLKMSFSRTTGQLKRMYNS 625 (776)
Q Consensus 598 ~~~~~leN~~~~v~~~~~~G~i~sl~dk 625 (776)
...+.|+|+.++++|+...|.|.++.-|
T Consensus 34 ~~~i~V~td~l~~~is~~GG~I~~~~Lk 61 (330)
T 3blc_A 34 GKLISVKTDVLDLTINTRGGDVEQALLP 61 (330)
T ss_dssp CCEEEEECSSCEEEEETBTCCEEEEEEE
T ss_pred CCEEEEECCcEEEEEECCCCEEeEEECC
Confidence 3458999999999999888999988754
No 31
>2og0_A Excisionase; protein-DNA complex, DNA architectural protein, 'winged'HELI protein, phage excision; 1.90A {Enterobacteria phage lambda} SCOP: a.6.1.7 PDB: 1lx8_A 1rh6_A 2ief_A
Probab=29.58 E-value=53 Score=24.04 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=26.1
Q ss_pred HHHHhhcC-hHHHHHHHHHHHcCcE----EEEccee-eeecc
Q 004057 103 HRWWVGQS-PEIQEQVRKLVDASQL----EFVNGGW-CMHDE 138 (776)
Q Consensus 103 ~~w~~~~~-p~~~~~vk~lv~~Grl----e~v~G~w-v~~De 138 (776)
.+|-+... |--...+++++++|+| .=+|+-| +..+.
T Consensus 6 ~EwA~~~~~~~s~~Tl~r~ar~G~I~Pp~~KvGr~wrv~~~a 47 (52)
T 2og0_A 6 QEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESA 47 (52)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHTTCEESCCEEETTEEEEETTC
T ss_pred HHHHHHhcCCCCHHHHHHHHHCCCCCCcccccCCEEEEcccc
Confidence 34444332 5577899999999999 6689999 66554
No 32
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=24.12 E-value=66 Score=31.43 Aligned_cols=57 Identities=18% Similarity=0.239 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHcCCCCcEEEehhHHHHHHHhhcChH-------HHHHHHHHHHcCcEEEEcce
Q 004057 76 ENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVGQSPE-------IQEQVRKLVDASQLEFVNGG 132 (776)
Q Consensus 76 ~~~l~~vl~~l~~~p~~~F~~~e~~~~~~w~~~~~p~-------~~~~vk~lv~~Grle~v~G~ 132 (776)
+.=+-.++.-+++=|...|+++++.-|+..+...+|. .|+++.-|-..|-|||++-|
T Consensus 189 rgWlldi~~cid~i~~~eFtL~diY~fe~~L~~~~P~N~~Ik~KIRQqLQ~LRD~g~IeFl~rG 252 (257)
T 4esj_A 189 RGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRG 252 (257)
T ss_dssp HHHHHHHHHHHHHSCSSEEEHHHHHTTHHHHHHHSTTCSCHHHHHHHHHHHHHHTTSEEECSTT
T ss_pred ccHHHHHHHHHHhcCcceeeHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHhhcCceEEecCC
Confidence 3445567777888888889999998888888888884 46667777789999999755
No 33
>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7
Probab=22.90 E-value=19 Score=32.33 Aligned_cols=16 Identities=38% Similarity=0.524 Sum_probs=14.2
Q ss_pred cceeecCCCCCChhhH
Q 004057 166 KAGWQIDPFGHSAVQA 181 (776)
Q Consensus 166 ~~~w~~D~FG~s~~~p 181 (776)
+.||..|+||++|++-
T Consensus 111 ~~g~v~Dp~G~~W~i~ 126 (139)
T 1tsj_A 111 EFAWVQDKFGVSFQLA 126 (139)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred eEEEEECCCCCEEEEe
Confidence 7899999999999853
No 34
>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0
Probab=20.75 E-value=22 Score=31.87 Aligned_cols=15 Identities=40% Similarity=0.592 Sum_probs=13.5
Q ss_pred cceeecCCCCCChhh
Q 004057 166 KAGWQIDPFGHSAVQ 180 (776)
Q Consensus 166 ~~~w~~D~FG~s~~~ 180 (776)
+.||..|+|||+|++
T Consensus 120 ~~~~~~Dp~G~~W~i 134 (138)
T 3oms_A 120 KFGWLNDKYGVSWQL 134 (138)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 689999999999975
Done!