Query 004058
Match_columns 776
No_of_seqs 373 out of 2896
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 12:54:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 4E-104 1E-108 924.9 68.1 642 24-775 2-650 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 1E-94 3.5E-99 840.3 67.9 594 24-751 2-604 (605)
3 2kho_A Heat shock protein 70; 100.0 1.1E-93 3.8E-98 831.7 55.6 594 24-751 2-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 4.4E-87 1.5E-91 769.2 49.9 544 22-691 2-554 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 7.7E-78 2.6E-82 687.2 47.7 500 24-680 2-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 8.5E-62 2.9E-66 541.4 42.1 379 22-419 21-403 (404)
7 4gni_A Putative heat shock pro 100.0 1.8E-61 6.3E-66 539.3 41.8 379 23-422 12-406 (409)
8 3qfu_A 78 kDa glucose-regulate 100.0 3.8E-60 1.3E-64 526.5 43.4 374 24-418 18-394 (394)
9 1dkg_D Molecular chaperone DNA 100.0 3.3E-59 1.1E-63 516.8 39.7 377 24-418 2-383 (383)
10 1jce_A ROD shape-determining p 100.0 1E-39 3.4E-44 355.3 27.5 311 24-418 3-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 9.2E-31 3.1E-35 261.8 23.2 211 428-751 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 3.9E-29 1.3E-33 252.7 24.4 211 430-753 1-215 (227)
13 2fsj_A Hypothetical protein TA 99.9 6.8E-27 2.3E-31 253.2 12.9 231 136-415 95-343 (346)
14 2ych_A Competence protein PILM 99.9 3E-25 1E-29 244.2 19.8 299 23-393 12-332 (377)
15 3h1q_A Ethanolamine utilizatio 99.9 3E-24 1E-28 225.2 24.9 202 140-414 71-272 (272)
16 1k8k_A ARP3, actin-like protei 99.9 1.1E-24 3.6E-29 243.1 15.3 228 161-416 107-387 (418)
17 3n8e_A Stress-70 protein, mito 99.9 4.6E-24 1.6E-28 206.0 15.9 161 425-691 18-182 (182)
18 2fxu_A Alpha-actin-1, actin, a 99.9 3E-24 1E-28 235.6 16.0 307 24-415 5-348 (375)
19 4a2a_A Cell division protein F 99.9 5E-23 1.7E-27 227.7 24.1 200 175-417 168-394 (419)
20 2zgy_A Plasmid segregation pro 99.8 4.8E-21 1.7E-25 205.5 14.9 228 134-414 72-319 (320)
21 3h0x_A 78 kDa glucose-regulate 99.8 2.3E-20 7.8E-25 175.7 15.0 147 429-680 2-152 (152)
22 3dob_A Heat shock 70 kDa prote 99.8 2.6E-20 9E-25 174.9 12.0 147 429-680 2-152 (152)
23 3dqg_A Heat shock 70 kDa prote 99.8 2.6E-20 8.9E-25 174.7 9.2 146 429-680 2-151 (151)
24 2op6_A Heat shock 70 kDa prote 99.8 5.3E-19 1.8E-23 167.4 13.0 147 429-680 2-152 (152)
25 1k8k_B ARP2, actin-like protei 99.7 5.4E-19 1.8E-23 194.8 4.3 215 162-416 105-364 (394)
26 4ehu_A Activator of 2-hydroxyi 99.7 3.4E-17 1.2E-21 171.7 15.2 183 186-418 68-256 (276)
27 3js6_A Uncharacterized PARM pr 99.7 6.9E-17 2.4E-21 174.7 12.6 207 163-419 115-339 (355)
28 4apw_A ALP12; actin-like prote 99.5 8.5E-15 2.9E-19 157.0 4.8 204 162-418 106-326 (329)
29 1q5l_A Chaperone protein DNAK; 99.5 6.7E-14 2.3E-18 128.8 9.1 100 425-542 15-118 (135)
30 3lof_A Heat shock 70 kDa prote 99.4 3.4E-12 1.2E-16 114.0 11.0 83 668-752 3-85 (113)
31 3dwl_A Actin-related protein 3 99.3 4.8E-13 1.6E-17 147.9 5.9 243 141-416 104-396 (427)
32 3qb0_A Actin-related protein 4 99.3 4.8E-11 1.6E-15 133.2 18.9 176 25-278 24-209 (498)
33 2p32_A Heat shock 70 kDa prote 99.1 1.1E-10 3.8E-15 105.2 6.8 82 668-751 12-93 (120)
34 2d0o_A DIOL dehydratase-reacti 99.0 3E-10 1E-14 123.6 9.4 197 175-416 368-604 (610)
35 4fo0_A Actin-related protein 8 99.0 9.9E-09 3.4E-13 119.2 22.5 108 149-279 180-294 (593)
36 1nbw_A Glycerol dehydratase re 99.0 6.6E-10 2.3E-14 121.5 9.2 193 177-414 372-604 (607)
37 1ud0_A HSC70, 70 kDa heat-shoc 99.0 3.1E-10 1.1E-14 101.3 4.5 79 672-752 2-80 (113)
38 1hux_A Activator of (R)-2-hydr 98.4 5.8E-06 2E-10 85.5 17.7 72 341-417 186-257 (270)
39 4am6_A Actin-like protein ARP8 97.8 4.9E-05 1.7E-09 85.8 10.3 124 162-315 222-347 (655)
40 2ews_A Pantothenate kinase; PA 96.2 0.051 1.7E-06 55.9 13.3 77 333-414 206-286 (287)
41 2e2o_A Hexokinase; acetate and 96.0 1.2 4E-05 45.9 23.6 49 367-416 239-287 (299)
42 1t6c_A Exopolyphosphatase; alp 96.0 0.07 2.4E-06 55.9 13.7 77 178-272 101-177 (315)
43 3vgl_A Glucokinase; ROK family 96.0 0.096 3.3E-06 55.0 14.9 44 187-233 96-139 (321)
44 3l0q_A Xylulose kinase; xlylul 95.5 0.025 8.7E-07 64.4 8.5 87 333-421 408-494 (554)
45 2i7n_A Pantothenate kinase 1; 95.4 0.11 3.9E-06 54.9 12.6 47 368-414 306-358 (360)
46 2ivn_A O-sialoglycoprotein end 95.4 3 0.0001 43.6 23.8 65 346-416 228-298 (330)
47 4bc3_A Xylulose kinase; transf 95.2 0.036 1.2E-06 62.9 8.7 77 340-418 407-483 (538)
48 4db3_A Glcnac kinase, N-acetyl 95.2 1.4 4.7E-05 46.2 20.6 48 367-414 269-324 (327)
49 3hz6_A Xylulokinase; xylulose, 95.2 0.042 1.4E-06 61.9 8.9 81 335-421 375-455 (511)
50 2itm_A Xylulose kinase, xylulo 95.1 0.028 9.7E-07 62.9 7.4 52 367-419 386-437 (484)
51 2zf5_O Glycerol kinase; hypert 95.0 0.049 1.7E-06 61.1 8.7 80 335-420 365-444 (497)
52 3ll3_A Gluconate kinase; xylul 94.9 0.048 1.6E-06 61.3 8.3 53 367-421 393-445 (504)
53 3i8b_A Xylulose kinase; strain 94.7 0.037 1.3E-06 62.3 6.8 79 335-419 395-474 (515)
54 3vov_A Glucokinase, hexokinase 94.5 0.68 2.3E-05 48.0 15.7 44 187-233 98-141 (302)
55 4htl_A Beta-glucoside kinase; 94.3 1.4 4.8E-05 45.4 17.4 50 367-416 237-291 (297)
56 3g25_A Glycerol kinase; IDP007 94.3 0.058 2E-06 60.6 7.1 82 335-421 374-456 (501)
57 3jvp_A Ribulokinase; PSI-II, N 94.2 0.054 1.8E-06 61.9 6.8 77 335-419 410-490 (572)
58 2qm1_A Glucokinase; alpha-beta 94.0 4 0.00014 42.3 20.5 49 368-416 263-321 (326)
59 3ifr_A Carbohydrate kinase, FG 94.0 0.06 2.1E-06 60.5 6.5 81 335-421 371-452 (508)
60 3ezw_A Glycerol kinase; glycer 93.9 0.1 3.6E-06 58.9 8.4 83 334-421 371-454 (526)
61 3r8e_A Hypothetical sugar kina 93.9 0.29 1E-05 51.3 11.3 49 367-415 260-318 (321)
62 3h3n_X Glycerol kinase; ATP-bi 93.9 0.072 2.5E-06 59.9 7.0 82 335-421 373-455 (506)
63 2dpn_A Glycerol kinase; thermu 93.9 0.11 3.6E-06 58.4 8.3 80 335-419 368-448 (495)
64 4e1j_A Glycerol kinase; struct 93.8 0.054 1.8E-06 61.1 5.6 53 367-421 425-477 (520)
65 2p3r_A Glycerol kinase; glycer 93.7 0.069 2.3E-06 60.1 6.3 53 367-421 401-453 (510)
66 2d4w_A Glycerol kinase; alpha 93.0 0.11 3.7E-06 58.4 6.5 81 335-420 373-454 (504)
67 2w40_A Glycerol kinase, putati 92.8 0.13 4.4E-06 57.8 6.7 81 335-420 376-458 (503)
68 2uyt_A Rhamnulokinase; rhamnos 92.6 0.13 4.5E-06 57.4 6.6 78 333-416 361-439 (489)
69 2ch5_A NAGK protein; transfera 92.3 12 0.00041 39.0 29.6 45 160-205 70-118 (347)
70 2hoe_A N-acetylglucosamine kin 92.0 4 0.00014 43.6 17.1 42 187-233 188-229 (380)
71 2ap1_A Putative regulator prot 90.4 1.7 5.8E-05 45.4 11.9 44 187-233 120-163 (327)
72 3mdq_A Exopolyphosphatase; str 89.8 0.71 2.4E-05 48.2 8.2 56 178-234 93-149 (315)
73 3o8m_A Hexokinase; rnaseh-like 88.4 5.2 0.00018 44.0 14.2 58 173-235 184-243 (485)
74 1z05_A Transcriptional regulat 88.0 7 0.00024 42.4 15.1 44 187-233 208-251 (429)
75 3h6e_A Carbohydrate kinase, FG 88.0 0.53 1.8E-05 52.3 6.1 71 340-416 362-435 (482)
76 3cer_A Possible exopolyphospha 87.0 1.3 4.6E-05 46.6 8.2 56 178-234 106-164 (343)
77 3eno_A Putative O-sialoglycopr 84.3 42 0.0014 34.8 21.1 67 346-417 233-304 (334)
78 1u6z_A Exopolyphosphatase; alp 80.9 4.5 0.00015 45.1 9.5 53 180-234 102-155 (513)
79 3bex_A Type III pantothenate k 79.9 13 0.00044 37.0 11.6 17 25-41 4-20 (249)
80 3hi0_A Putative exopolyphospha 79.3 3.5 0.00012 45.9 7.9 55 177-234 103-158 (508)
81 2yhx_A Hexokinase B; transfera 76.5 13 0.00043 40.7 11.1 54 175-233 164-219 (457)
82 3en9_A Glycoprotease, O-sialog 76.0 50 0.0017 36.8 16.3 42 346-392 232-273 (540)
83 3aap_A Ectonucleoside triphosp 75.3 3.4 0.00012 43.6 6.0 44 188-233 108-157 (353)
84 1woq_A Inorganic polyphosphate 73.5 44 0.0015 33.2 13.8 45 187-233 114-158 (267)
85 1bdg_A Hexokinase; phosphotran 73.2 29 0.001 37.7 13.0 60 169-233 167-228 (451)
86 3qbx_A Anhydro-N-acetylmuramic 72.9 8.8 0.0003 40.4 8.3 66 346-416 265-336 (371)
87 4g9i_A Hydrogenase maturation 72.0 9 0.00031 44.8 9.0 64 350-418 693-761 (772)
88 1iv0_A Hypothetical protein; r 70.6 4.7 0.00016 33.9 4.5 17 25-41 2-18 (98)
89 3cqy_A Anhydro-N-acetylmuramic 69.8 9.8 0.00033 40.1 7.8 70 341-416 267-342 (370)
90 3f9m_A Glucokinase; hexokinase 64.8 1.2 4.2E-05 48.7 -0.3 53 175-233 185-240 (470)
91 3epq_A Putative fructokinase; 63.4 21 0.00072 36.5 8.9 44 187-233 97-140 (302)
92 3ttc_A HYPF, transcriptional r 62.6 28 0.00096 39.7 10.3 66 346-416 583-651 (657)
93 3cj1_A Ectonucleoside triphosp 62.0 7.8 0.00027 42.4 5.4 43 190-233 150-207 (456)
94 3vth_A Hydrogenase maturation 61.1 23 0.00078 41.3 9.3 52 367-418 693-749 (761)
95 3hm8_A Hexokinase-3; glucose, 60.6 1.8 6.3E-05 46.9 0.1 147 26-227 61-211 (445)
96 2gup_A ROK family protein; sug 58.4 36 0.0012 34.3 9.6 50 367-416 227-287 (292)
97 3ven_A O-carbamoyltransferase 53.1 43 0.0015 37.5 9.5 79 336-419 280-360 (576)
98 3mcp_A Glucokinase; structural 52.5 86 0.003 32.9 11.5 122 17-226 2-158 (366)
99 3zx3_A Ectonucleoside triphosp 52.3 19 0.00064 39.2 6.3 43 191-234 151-199 (452)
100 1z6r_A MLC protein; transcript 52.0 45 0.0015 35.5 9.5 44 187-233 186-229 (406)
101 1cza_N Hexokinase type I; stru 51.6 33 0.0011 41.0 8.9 56 173-233 630-688 (917)
102 1vhx_A Putative holliday junct 51.4 7.5 0.00026 35.4 2.6 18 24-41 3-20 (150)
103 4ep4_A Crossover junction endo 49.3 15 0.00052 34.0 4.3 19 24-42 1-19 (166)
104 3ll3_A Gluconate kinase; xylul 48.8 11 0.00038 41.8 4.0 20 23-42 3-22 (504)
105 4fla_A Regulation of nuclear P 48.7 1.5E+02 0.0053 26.7 11.8 92 644-746 19-110 (152)
106 1hjr_A Holliday junction resol 48.4 12 0.00042 34.4 3.5 19 24-42 1-19 (158)
107 1nu0_A Hypothetical protein YQ 48.3 12 0.00042 33.5 3.4 17 25-41 4-20 (138)
108 4bc3_A Xylulose kinase; transf 46.0 12 0.00041 41.9 3.7 22 21-42 7-28 (538)
109 3l0q_A Xylulose kinase; xlylul 44.9 14 0.00049 41.4 4.1 20 23-42 4-23 (554)
110 3nmd_A CGMP dependent protein 44.8 37 0.0013 26.5 5.1 46 653-701 26-71 (72)
111 2ews_A Pantothenate kinase; PA 44.6 12 0.00041 38.1 3.1 24 18-41 14-37 (287)
112 2uyt_A Rhamnulokinase; rhamnos 44.5 10 0.00035 41.8 2.9 20 23-42 3-22 (489)
113 2aa4_A Mannac kinase, putative 44.1 36 0.0012 34.2 6.8 49 367-415 233-287 (289)
114 3ezw_A Glycerol kinase; glycer 44.0 12 0.00041 41.8 3.3 18 24-41 4-21 (526)
115 1hnj_A Beta-ketoacyl-acyl carr 42.6 28 0.00094 35.7 5.7 48 343-393 213-260 (317)
116 2p3r_A Glycerol kinase; glycer 42.5 14 0.00049 41.0 3.6 18 24-41 3-20 (510)
117 3h6e_A Carbohydrate kinase, FG 42.5 13 0.00046 40.9 3.3 18 24-41 6-23 (482)
118 3hz6_A Xylulokinase; xylulose, 42.4 16 0.00055 40.6 4.0 20 23-42 4-23 (511)
119 4e1j_A Glycerol kinase; struct 41.8 14 0.00047 41.3 3.3 18 24-41 26-43 (520)
120 3jvp_A Ribulokinase; PSI-II, N 41.7 15 0.0005 41.6 3.6 20 23-42 4-23 (572)
121 3i8b_A Xylulose kinase; strain 41.3 17 0.00057 40.5 3.9 19 23-41 4-22 (515)
122 3h3n_X Glycerol kinase; ATP-bi 40.2 18 0.00061 40.2 3.9 20 23-42 4-23 (506)
123 3ifr_A Carbohydrate kinase, FG 40.0 15 0.00051 40.8 3.3 20 23-42 6-25 (508)
124 3cet_A Conserved archaeal prot 39.6 17 0.00057 37.7 3.2 37 193-234 109-145 (334)
125 2w40_A Glycerol kinase, putati 38.5 18 0.00063 40.0 3.7 19 24-42 4-22 (503)
126 2dpn_A Glycerol kinase; thermu 38.3 15 0.0005 40.7 2.8 17 25-41 3-19 (495)
127 1zc6_A Probable N-acetylglucos 36.8 21 0.0007 36.5 3.5 64 343-416 228-293 (305)
128 3g25_A Glycerol kinase; IDP007 36.2 20 0.00069 39.6 3.5 18 24-41 6-23 (501)
129 2zf5_O Glycerol kinase; hypert 35.3 18 0.00063 39.9 3.0 17 25-41 4-20 (497)
130 1saz_A Probable butyrate kinas 34.8 35 0.0012 36.1 5.0 50 367-416 295-348 (381)
131 2ebd_A 3-oxoacyl-[acyl-carrier 34.8 38 0.0013 34.4 5.2 46 345-393 207-252 (309)
132 1ub7_A 3-oxoacyl-[acyl-carrier 34.1 36 0.0012 34.9 4.9 46 345-393 217-262 (322)
133 3htv_A D-allose kinase, alloki 33.9 1E+02 0.0034 31.4 8.3 50 367-416 239-299 (310)
134 1mzj_A Beta-ketoacylsynthase I 33.8 52 0.0018 34.0 6.1 45 346-393 229-273 (339)
135 1zbs_A Hypothetical protein PG 33.2 29 0.00098 35.2 3.9 68 342-416 211-280 (291)
136 1d7m_A Cortexillin I; coiled-c 32.1 1.2E+02 0.0042 24.3 6.3 14 731-744 44-57 (101)
137 2itm_A Xylulose kinase, xylulo 32.1 26 0.00088 38.5 3.5 16 26-41 2-17 (484)
138 4gic_A HDH, histidinol dehydro 31.7 53 0.0018 35.0 5.5 48 161-209 160-208 (423)
139 1zow_A 3-oxoacyl-[acyl-carrier 31.3 57 0.0019 33.1 5.8 47 344-393 208-254 (313)
140 2d4w_A Glycerol kinase; alpha 30.5 25 0.00084 38.9 3.0 17 25-41 3-19 (504)
141 2yy0_A C-MYC-binding protein; 30.0 70 0.0024 23.3 4.3 49 633-682 3-52 (53)
142 2x3e_A 3-oxoacyl-[acyl-carrier 29.3 56 0.0019 33.6 5.4 46 345-393 221-266 (331)
143 1msz_A DNA-binding protein smu 28.7 33 0.0011 27.9 2.6 28 164-191 34-61 (86)
144 2q2r_A Glucokinase 1, putative 27.1 88 0.003 32.7 6.6 20 23-42 28-47 (373)
145 3o8m_A Hexokinase; rnaseh-like 25.6 1.7E+02 0.0058 32.0 8.5 23 214-236 78-100 (485)
146 3djc_A Type III pantothenate k 25.5 40 0.0014 33.8 3.2 72 333-415 181-254 (266)
147 3epq_A Putative fructokinase; 24.8 1.2E+02 0.0041 30.7 6.9 50 367-416 224-289 (302)
148 2yhx_A Hexokinase B; transfera 24.5 2.2E+02 0.0074 30.8 9.1 24 213-236 58-81 (457)
149 3zyy_X Iron-sulfur cluster bin 24.1 1.3E+02 0.0043 34.1 7.2 61 331-392 499-560 (631)
150 4dfe_A 3-oxoacyl-[acyl-carrier 23.1 1.1E+02 0.0038 31.4 6.3 48 343-393 229-276 (333)
151 1ted_A PKS18; thiolase fold, s 22.5 81 0.0028 33.3 5.2 46 345-393 284-329 (393)
152 1u6e_A 3-oxoacyl-[acyl-carrier 22.3 89 0.003 32.0 5.4 46 345-393 229-274 (335)
153 3t69_A Putative 2-dehydro-3-de 22.0 73 0.0025 32.9 4.4 48 369-419 260-307 (330)
154 1zc6_A Probable N-acetylglucos 21.9 44 0.0015 34.0 2.8 55 162-227 77-133 (305)
155 3ghg_A Fibrinogen alpha chain; 21.8 7.9E+02 0.027 26.7 12.9 19 673-691 77-95 (562)
156 4am6_A Actin-like protein ARP8 21.8 48 0.0016 37.6 3.2 26 368-393 501-526 (655)
157 1z6r_A MLC protein; transcript 20.9 1.2E+02 0.0041 32.1 6.2 50 367-416 334-393 (406)
158 1kae_A HDH, histidinol dehydro 20.8 65 0.0022 34.4 3.8 45 161-209 154-199 (434)
159 2yhw_A Bifunctional UDP-N-acet 20.5 2.5E+02 0.0085 28.7 8.4 44 187-233 131-174 (343)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=4.2e-104 Score=924.88 Aligned_cols=642 Identities=27% Similarity=0.450 Sum_probs=560.4
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCCch
Q 004058 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (776)
|.+||||||||||+||++ .+| +++++.|+.|+|++||+|+|.+++++||..|..++..+|.++++++||+||+.+.
T Consensus 2 m~~iGIDlGTtns~va~~--~~g--~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~ 77 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVA--RNR--GIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYH 77 (675)
T ss_dssp CCCEEEECCSSEEEEEEE--ETT--EEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTT
T ss_pred CcEEEEEcCCCcEEEEEE--ECC--eeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCC
Confidence 569999999999999999 555 5789999999999999999999999999999999999999999999999999765
Q ss_pred hhHhhHhhcCCCceEeeCCCCceEEEeC--C-CccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHH
Q 004058 104 QVKHLIDSLYLPFNVVEDSRGAVSFKID--E-NNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (776)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l 180 (776)
+........++||.++...+|.+.+.+. + +..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++
T Consensus 78 d~~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~ 157 (675)
T 3d2f_A 78 HPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNI 157 (675)
T ss_dssp CTTHHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHH
T ss_pred cHHHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHH
Confidence 4433445678999999877888877653 3 257999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceeeecchhHHHHHHhcccc-CCC---CCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEE
Q 004058 181 MQAAELAGMNVLSLVNEHSGAALQYGIDK-DFS---NESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKD 256 (776)
Q Consensus 181 ~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~-~~~---~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~ 256 (776)
++|+++|||++++|++||+|||++|++.+ .++ ..+.++||||+||||||+|++++. .+.++|++
T Consensus 158 ~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~------------~g~~~V~a 225 (675)
T 3d2f_A 158 ADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK------------KGQLKVLG 225 (675)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE------------TTEEEEEE
T ss_pred HHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec------------CCeEEEEE
Confidence 99999999999999999999999998865 222 346889999999999999999764 67899999
Q ss_pred eecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeH
Q 004058 257 VRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITR 336 (776)
Q Consensus 257 ~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr 336 (776)
+.|+..+||++||+.|++|+..+|..+ ++.++..+++++.+|+.+||++|+.||.+.++.+.+++++++.++.+.|||
T Consensus 226 ~~gd~~lGG~d~D~~l~~~l~~~f~~~--~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr 303 (675)
T 3d2f_A 226 TACDKHFGGRDFDLAITEHFADEFKTK--YKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSR 303 (675)
T ss_dssp EEEETTCSHHHHHHHHHHHHHHHHHHH--TSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEH
T ss_pred EcCCCCccHHHHHHHHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeH
Confidence 999999999999999999999999998 888888899999999999999999999999999999998889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHH
Q 004058 337 QKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 337 ~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ 416 (776)
++|+++|+++++++..+|+++|+.+++++.+|+.|+||||+||+|+|++.|++.||. ++..+.||++|||+|||++|+.
T Consensus 304 ~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~-~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 304 EELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK-PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp HHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTS-CEECCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCC-CccccCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999985 6778999999999999999999
Q ss_pred hcCCccccCcceEEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeecccceEEEEEeecCCCCCCCCCCC
Q 004058 417 LSDGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKDFEVSLAYESEDLLPPGATSP 496 (776)
Q Consensus 417 ls~~~~~~~~~~~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~~~i~i~y~~~~~~~~~~~~~ 496 (776)
+++.+++ +++.+.|++||+||+++.++.. .....+|||+|+++|++++.+|++..++.+.+.|+|++.++.+ +|.
T Consensus 383 ls~~~~v-~~~~l~Dv~p~slgi~~~~~~~---~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~-~n~ 457 (675)
T 3d2f_A 383 HSPTLRV-RPFKFEDIHPYSVSYSWDKQVE---DEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPN-TPE 457 (675)
T ss_dssp TCSSCCC-CCCEEEEEECSCEEEEECCTTC---SCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTT-CCS
T ss_pred hCCCCcc-cceEEEeeeecceEeeecCCCC---CcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccc-cCc
Confidence 9999988 8999999999999999987631 1234589999999999999999998999999989898888764 589
Q ss_pred ceeEEEEcCCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhhh
Q 004058 497 VFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAA 576 (776)
Q Consensus 497 ~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (776)
.||+|.+.||++++ +| .+.+|+|+|.+|.||+|+|+.++++.+... +
T Consensus 458 ~lg~f~l~gi~~~~-----~g--~~~~i~v~f~id~~Gil~V~a~~~~~~~~~------~-------------------- 504 (675)
T 3d2f_A 458 QIANWEITGVQLPE-----GQ--DSVPVKLKLRCDPSGLHTIEEAYTIEDIEA------G-------------------- 504 (675)
T ss_dssp EEEEEEEECCCCCS-----SC--SCEEEEEEEEECTTSCEEEEEEEEECC------------------------------
T ss_pred eeeEEEecCcCCCC-----CC--CcceEEEEEEEcCCCcEEEEEEEEeecccc------c--------------------
Confidence 99999999999875 33 333899999999999999998876531100 0
Q ss_pred hcccccccccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHH
Q 004058 577 QNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAE 656 (776)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~ 656 (776)
+.|.+..+..|+++.. ..+||++++++|+
T Consensus 505 -----------------------------------------------~~~~t~~~~~i~i~~~----~~~ls~~ei~~~~ 533 (675)
T 3d2f_A 505 -----------------------------------------------SDTKTVKKDDLTIVAH----TFGLDAKKLNELI 533 (675)
T ss_dssp -------------------------------------------------CCCCEEEECEEEEE----CSSCCHHHHHHHH
T ss_pred -----------------------------------------------ccccCcceeeEEEecC----CCCCCHHHHHHHH
Confidence 0000111124555532 2369999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHH
Q 004058 657 AKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLD 736 (776)
Q Consensus 657 ~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~k~~ 736 (776)
+++++|..+|+.++++.++||+||+|||++|+.|+++ |.++++++++++|.++|+++++|||++++++++++|++|++
T Consensus 534 ~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~ 611 (675)
T 3d2f_A 534 EKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEE--YAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYE 611 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--TGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999863 88999999999999999999999999888899999999999
Q ss_pred HHHHhhhHHHHHHHhhhhchHHHHHHHHHHHHHHHHhhh
Q 004058 737 VLKAIGDPVFFRFKELTARPASVEHAQKYLGQLQQVLHM 775 (776)
Q Consensus 737 ~L~~~~~pi~~R~~e~~~rp~~~~~~~~~l~~~~~~~~~ 775 (776)
+|++++.||..|+.|++.||++++.|++.|+.++.+++.
T Consensus 612 ~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~ 650 (675)
T 3d2f_A 612 ELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEK 650 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998864
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1e-94 Score=840.32 Aligned_cols=594 Identities=22% Similarity=0.419 Sum_probs=532.1
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEe-CCceEEcHhHHHhHhhCcchHHHHHHHhhCCCc
Q 004058 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (776)
+.+||||||||||+||++ .+| .++++.|..|.+++||+|+|. ++++++|..|..++..+|.++++++|||||+.+
T Consensus 2 ~~viGIDlGTT~S~Va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~ 77 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRF 77 (605)
T ss_dssp CCEEEEECCSSEEEEEEE--ETT--EEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBT
T ss_pred CcEEEEEcCCCcEEEEEE--ECC--EEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCC
Confidence 469999999999999999 655 458999999999999999996 568999999999999999999999999999976
Q ss_pred hhhHhhHhhcCCCceEeeCCCCceEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHHHH
Q 004058 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQ 182 (776)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~ 182 (776)
.+........++||+++...++.+.+.+. +..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++
T Consensus 78 ~d~~v~~~~~~~p~~~~~~~~g~~~~~~~-~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 78 QDEEVQRDVSIMPFKIIAADNGDAWVEVK-GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp TSHHHHHHHTTCSSEEEECTTSBEEEEET-TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred CCHHHHHHhhcCCeEEEEcCCCceEEEEC-CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 65444456678999999988999988885 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCC
Q 004058 183 AAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAE 262 (776)
Q Consensus 183 Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 262 (776)
|+++|||+++++++||+|||++|++... ..+.++||||+||||||++++++... ...+.++++++.++.+
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~--~~~~~vlV~DlGGGT~Dvsi~~~~~~--------~~~~~~evla~~gd~~ 226 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGAFDISIIEIDEV--------DGEKTFEVLATNGDTH 226 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSC--CSSEEEEEEEECSSCEEEEEEEEEES--------SSCEEEEEEEEEEETT
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhcc--CCCCEEEEEECCCCeEEEEEEEEecC--------CCCceEEEEEecCCCC
Confidence 9999999999999999999999988763 34589999999999999999987521 1137899999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccC----cceEEEeeHHH
Q 004058 263 LGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITRQK 338 (776)
Q Consensus 263 lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~e 338 (776)
+||.+||++|++|+.++|+.+ ++.++..+++++.+|+.+||++|+.||...++.+.++.+..+ .++.+.|||++
T Consensus 227 lGG~d~D~~l~~~l~~~f~~~--~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~ 304 (605)
T 4b9q_A 227 LGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304 (605)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH--TCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHH
T ss_pred cChHHHHHHHHHHHHHHHhhh--cCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHH
Confidence 999999999999999999998 888888899999999999999999999999999999877654 67889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhc
Q 004058 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls 418 (776)
|+++++++++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|++.||. ++..+.||++|||+|||++|+.++
T Consensus 305 ~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~-~~~~~~nPdeaVA~GAai~a~~l~ 383 (605)
T 4b9q_A 305 LESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGVLT 383 (605)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTS-CCCSSSCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhcc-CcCCCcChhHHHHHhHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999985 677899999999999999999999
Q ss_pred CCccccCcceEEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeeccc----ceEEEEEeecCCCCCCCCC
Q 004058 419 DGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGAT 494 (776)
Q Consensus 419 ~~~~~~~~~~~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~ 494 (776)
+.. +++.+.|++|++||+++.++.+. +|||+|+++|++++.+|++.. .+.|.+ |+|++.++. +
T Consensus 384 ~~~---~~~~l~dv~p~slgie~~~g~~~-------~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~--~ 450 (605)
T 4b9q_A 384 GDV---KDVLLLDVTPLSLGIETMGGVMT-------TLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--D 450 (605)
T ss_dssp TSS---CSEEEECBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGG--G
T ss_pred CCC---CceEEEeeeeeEEEEEEcCCEEE-------EEEeCCCcCCcceEEEeeeecccCceEEEEE-Eeccccccc--c
Confidence 863 68899999999999999887653 899999999999999998764 488999 999988876 6
Q ss_pred CCceeEEEEcCCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhh
Q 004058 495 SPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAET 574 (776)
Q Consensus 495 ~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (776)
|..||+|.+.|+|+++ +| .| +|+|+|++|.||+|+|+..+..
T Consensus 451 n~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~~------------------------------ 492 (605)
T 4b9q_A 451 NKSLGQFNLDGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKDKN------------------------------ 492 (605)
T ss_dssp SEEEEEEEEECCCCCS-----TT--CC-CEEEEEEECTTSCEEEEEEETT------------------------------
T ss_pred CCEeeEEEEeCCCCCc-----CC--Cc-eEEEEEEEcCCcEEEEEEEecC------------------------------
Confidence 8999999999999886 34 56 8999999999999988644310
Q ss_pred hhhcccccccccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHH
Q 004058 575 AAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVD 654 (776)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~ 654 (776)
+++ ...++++. ...||++++++
T Consensus 493 -------tg~----------------------------------------------~~~i~i~~-----~~~ls~~ei~~ 514 (605)
T 4b9q_A 493 -------SGK----------------------------------------------EQKITIKA-----SSGLNEDEIQK 514 (605)
T ss_dssp -------TCC----------------------------------------------EECCEEES-----CCSCCHHHHHH
T ss_pred -------CCc----------------------------------------------EEEEEecC-----CCCCCHHHHHH
Confidence 000 01355542 23599999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH
Q 004058 655 AEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQER 734 (776)
Q Consensus 655 ~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~k 734 (776)
|.+++++|..+|++++++.++||+||+|+|++|+.|++ +..++++++++++.+.++++++||+.+ +.++|+++
T Consensus 515 ~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~ 587 (605)
T 4b9q_A 515 MVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIEAK 587 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHH
T ss_pred HHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHH
Confidence 99999999999999999999999999999999999974 778999999999999999999999976 48999999
Q ss_pred HHHHHHhhhHHHHHHHh
Q 004058 735 LDVLKAIGDPVFFRFKE 751 (776)
Q Consensus 735 ~~~L~~~~~pi~~R~~e 751 (776)
+++|++.+.||..++++
T Consensus 588 ~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 588 MQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.1e-93 Score=831.67 Aligned_cols=594 Identities=23% Similarity=0.420 Sum_probs=524.7
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEe-CCceEEcHhHHHhHhhCcchHHHHHHHhhCCCc
Q 004058 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (776)
+.+||||||||||+||++ .+| .++++.|+.|.+++||+|+|. +++++||..|+.++..+|.++++++||+||+.+
T Consensus 2 ~~viGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~ 77 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRF 77 (605)
T ss_dssp --CEEEECCSSEEEEEEE--ETT--EEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBS
T ss_pred CCEEEEEcCCcCEEEEEE--ECC--EEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCC
Confidence 358999999999999999 655 468999999999999999994 678999999999999999999999999999965
Q ss_pred hhhHhhHhhcCCCceEeeCCCCceEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHHHH
Q 004058 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQ 182 (776)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~ 182 (776)
.+.........+||+++.+.+|.+.+.+ +|..++|+++++++|+++++.|+.+++.++.++|||||+||++.||+++++
T Consensus 78 ~d~~v~~~~~~~p~~~~~~~~g~~~i~~-~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~ 156 (605)
T 2kho_A 78 QDEEVQRDVSIMPFKIIAADNGDAWVEV-KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp SSTTHHHHHHHCSSCEEECTTSBEEEEE-TTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred CcHHHHHHhhcCCeEEEECCCCceEEEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHH
Confidence 4322222344689999888888999988 457899999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCC
Q 004058 183 AAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAE 262 (776)
Q Consensus 183 Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 262 (776)
|+++|||+++++++||+|||++|++... ..+.++||||+||||||++++++... ...+.++++++.|+..
T Consensus 157 A~~~AGl~v~~li~EP~AAAlay~l~~~--~~~~~vlV~DlGGGT~Dvsi~~~~~~--------~~~g~~~v~a~~gd~~ 226 (605)
T 2kho_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIEIDEV--------DGEKTFEVLATNGDTH 226 (605)
T ss_dssp HHHTTTCEEEEEEEHHHHHHHHTTTTSS--SSEEEEEEEEECSSCEEEEEEEEECT--------TTSCEEEEEEEEEESS
T ss_pred HHHHcCCceEEEecCHHHHHHHhhhccc--CCCCEEEEEECCCCeEEEEEEEEEec--------CCCCeEEEEEECCCCC
Confidence 9999999999999999999999998652 24688999999999999999977421 0147899999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccC----cceEEEeeHHH
Q 004058 263 LGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITRQK 338 (776)
Q Consensus 263 lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~e 338 (776)
+||.+||+.|++|+.++|+.+ ++.++..+++++.+|+.+||++|+.||...++.+.++++.++ .++.++|||++
T Consensus 227 lGG~d~D~~l~~~l~~~~~~~--~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~ 304 (605)
T 2kho_A 227 LGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304 (605)
T ss_dssp CSGGGTHHHHHHHHHHHHHHH--HSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHH
Confidence 999999999999999999988 778888889999999999999999999999999999887653 56788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhc
Q 004058 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls 418 (776)
|+++++|+++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|++.||. ++..+.||++|||+|||++|+.++
T Consensus 305 fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~-~~~~~~npd~aVA~GAa~~a~~l~ 383 (605)
T 2kho_A 305 LESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGVLT 383 (605)
T ss_dssp HHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSS-CCBCSSCTTTHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCC-CcCcCCCcchHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999985 677899999999999999999998
Q ss_pred CCccccCcceEEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeeccc----ceEEEEEeecCCCCCCCCC
Q 004058 419 DGIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGAT 494 (776)
Q Consensus 419 ~~~~~~~~~~~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~ 494 (776)
+. + +++.+.|++|++||+++.++.+. +|||+|+++|++++..|++.. .+.|.+ |+|++.++. +
T Consensus 384 ~~--~-~~~~l~dv~p~slgi~~~~g~~~-------~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~--~ 450 (605)
T 2kho_A 384 GD--V-KDVLLLDVTPLSLGIETMGGVMT-------TLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--D 450 (605)
T ss_dssp TS--C-CCCCCSBCCCCCEEEEETTTEEE-------EEECTTBCSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGG--G
T ss_pred CC--c-cCceEEeeeeeeccccccCCceE-------EEEecccccCccceEEEEecCCCceEEEEEE-EeccCcccc--c
Confidence 75 4 68899999999999999887653 899999999999999998753 488899 999988776 5
Q ss_pred CCceeEEEEcCCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhh
Q 004058 495 SPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAET 574 (776)
Q Consensus 495 ~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (776)
|..||+|.+.|+|+++ +| .| +|+|+|++|.||+|+|+..+..
T Consensus 451 n~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~~------------------------------ 492 (605)
T 2kho_A 451 NKSLGQFNLDGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKDKN------------------------------ 492 (605)
T ss_dssp SEEEEEEEEECCCSCC-----TT--CS-CEEEEEEECTTSCEEEEEEETT------------------------------
T ss_pred CcEEeEEEecCCCCCC-----CC--Cc-EEEEEEEEcCCCceeEEEEEcC------------------------------
Confidence 8999999999999875 34 56 8999999999999987643200
Q ss_pred hhhcccccccccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHH
Q 004058 575 AAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVD 654 (776)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~ 654 (776)
++ + ...++++. ..+||++++++
T Consensus 493 -------tg------------------------------------------~----~~~i~i~~-----~~~ls~~~i~~ 514 (605)
T 2kho_A 493 -------SG------------------------------------------K----EQKITIKA-----SSGLNEDEIQK 514 (605)
T ss_dssp -------TC------------------------------------------C----EEEEEECT-----TSSCCHHHHHH
T ss_pred -------CC------------------------------------------c----eeeccccc-----ccCCCHHHHHH
Confidence 00 0 01355541 24699999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHH
Q 004058 655 AEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQER 734 (776)
Q Consensus 655 ~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~k 734 (776)
|++++++|..+|+.++++.++||+||+|+|++|+.|++ +.+++++++|+++.+.+++.++||+++ +.++|+++
T Consensus 515 ~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~---~~~~~~~~~~~~i~~~~~~~~~~l~~~----~~~~~~~~ 587 (605)
T 2kho_A 515 MVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIEAK 587 (605)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHH
Confidence 99999999999999999999999999999999999964 788999999999999999999999844 79999999
Q ss_pred HHHHHHhhhHHHHHHHh
Q 004058 735 LDVLKAIGDPVFFRFKE 751 (776)
Q Consensus 735 ~~~L~~~~~pi~~R~~e 751 (776)
+++|++++.||..|+++
T Consensus 588 ~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 588 MQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999763
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=4.4e-87 Score=769.22 Aligned_cols=544 Identities=30% Similarity=0.532 Sum_probs=481.6
Q ss_pred CCCcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCC
Q 004058 22 SQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKP 101 (776)
Q Consensus 22 ~~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~ 101 (776)
+++.+||||||||||+||++ .+| +++++.|+.|+|++||+|+|.+++++||..|..++..+|.++++++|||||+.
T Consensus 2 ~m~~~iGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~ 77 (554)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVF--QHG--KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRR 77 (554)
T ss_dssp CSCCCEEEEECSSEEEEEEE--CSS--SEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCC
T ss_pred CCCCEEEEEeCcccEEEEEE--ECC--EEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCC
Confidence 45679999999999999999 555 67899999999999999999988999999999999999999999999999997
Q ss_pred chhhHhhHhhcCCCceEeeCCCCceEEEe--CCC-ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHH
Q 004058 102 FKQVKHLIDSLYLPFNVVEDSRGAVSFKI--DEN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERK 178 (776)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~ 178 (776)
+.+........++||.++.. +|.+.+.+ .++ +.++|+++++++|+++++.++.+++.++.++|||||++|++.||+
T Consensus 78 ~~d~~v~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~ 156 (554)
T 1yuw_A 78 FDDAVVQSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQ 156 (554)
T ss_dssp SSCSHHHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHH
T ss_pred CCcHHHHHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHH
Confidence 65433334556899998853 56655544 332 679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEee
Q 004058 179 GLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVR 258 (776)
Q Consensus 179 ~l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~ 258 (776)
++++|++.|||+++++++||+|||++|++.... ..+.++||||+||||||++++++. .+.++++++.
T Consensus 157 a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~-~~~~~vlV~D~GgGT~Dvsv~~~~------------~g~~~v~a~~ 223 (554)
T 1yuw_A 157 ATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV-GAERNVLIFDLGGGTFDVSILTIA------------AGIFEVKSTA 223 (554)
T ss_dssp HHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTC-SSCEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccC-CCCcEEEEEEcCCCeEEEEEEEEc------------CCcEEEEEEe
Confidence 999999999999999999999999999986532 235789999999999999999764 6789999999
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHH
Q 004058 259 WDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQK 338 (776)
Q Consensus 259 ~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~e 338 (776)
++.++||++||+.|++|+.++|..+ ++.++..+++++.+|+.+||++|+.||...++.+.+++++++.++...|+|++
T Consensus 224 g~~~lGG~d~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~ 301 (554)
T 1yuw_A 224 GDTHLGGEDFDNRMVNHFIAEFKRK--HKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 301 (554)
T ss_dssp EETTCSHHHHHHHHHHHHHHHHHHH--TSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHH
Confidence 9999999999999999999999998 78888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhc
Q 004058 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls 418 (776)
|+++++++++++..+|+++|+.+++...+|+.|+||||+||+|+|++.|++.|+..++..+.||++|||+|||++|+.++
T Consensus 302 ~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~ 381 (554)
T 1yuw_A 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381 (554)
T ss_dssp HHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999866788899999999999999999998
Q ss_pred C--CccccCcceEEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeecc----cceEEEEEeecCCCCCCC
Q 004058 419 D--GIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHA----KDFEVSLAYESEDLLPPG 492 (776)
Q Consensus 419 ~--~~~~~~~~~~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~----~~~~i~i~y~~~~~~~~~ 492 (776)
+ .+++ +++.+.|++|++||+++.++.+ .+|||+|+++|++++.+|++. ..+.|.+ |+|++.++.
T Consensus 382 ~~~~~~~-~~~~~~dv~p~slgi~~~~g~~-------~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v-~~ge~~~~~- 451 (554)
T 1yuw_A 382 GDKSENV-QDLLLLDVTPLSLGIETAGGVM-------TVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQV-YEGERAMTK- 451 (554)
T ss_dssp SCCCCCT-TSSCCCCBCSSCEEEEETTTEE-------EEEECTTCBSSEEEEEEEEESSTTCSEEEEEE-EESSSSBGG-
T ss_pred CCccccc-cceEEEEeeeeEEEEEecCceE-------EEEEECCCccCceeEEEeeeccCCCceEEEEE-EecCccccc-
Confidence 7 4666 7899999999999999987755 389999999999999999875 3588999 999988766
Q ss_pred CCCCceeEEEEcCCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCch
Q 004058 493 ATSPVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISA 572 (776)
Q Consensus 493 ~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (776)
+|..||+|.+.|+|+.+ +| .| +|+|+|.+|.||+|+|+..+..
T Consensus 452 -~n~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~~---------------------------- 494 (554)
T 1yuw_A 452 -DNNLLGKFELTGIPPAP-----RG--VP-QIEVTFDIDANGILNVSAVDKS---------------------------- 494 (554)
T ss_dssp -GSEEEEEEEEECCCCCS-----TT--CC-CEEEEEEECTTCCEEEEEEETT----------------------------
T ss_pred -cCcEEEEEEEeCCCCCc-----cc--cc-EEEEEEEEccCceEEEEEEecc----------------------------
Confidence 58899999999999875 34 56 8999999999999987643200
Q ss_pred hhhhhcccccccccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHH
Q 004058 573 ETAAQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEAL 652 (776)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~ 652 (776)
++ + ...++++. ...+||++++
T Consensus 495 ---------tg------------------------------------------~----~~~~~i~~----~~~~ls~~~i 515 (554)
T 1yuw_A 495 ---------TG------------------------------------------K----ENKITITN----DKGRLSKEDI 515 (554)
T ss_dssp ---------TC------------------------------------------C----EEEEEECC----CSSCSCHHHH
T ss_pred ---------CC------------------------------------------C----ceeEEEec----CCCCCCHHHH
Confidence 00 0 01345542 1346999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhhhhHHHHHHhhcc
Q 004058 653 VDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFE 691 (776)
Q Consensus 653 ~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~ 691 (776)
+++++++++|+.+|++++++.++||+||+|+|++|+.|+
T Consensus 516 ~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~ 554 (554)
T 1yuw_A 516 ERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVE 554 (554)
T ss_dssp HHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCCC
T ss_pred HHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999873
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=7.7e-78 Score=687.19 Aligned_cols=500 Identities=27% Similarity=0.498 Sum_probs=437.8
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCCch
Q 004058 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (776)
+.+||||||||||+||++ .+| .++++.|+.|.+++||+|+|.+++++||..|..+...+| ++++++||+||+++
T Consensus 2 ~~~iGIDlGTt~s~va~~--~~g--~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~- 75 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVL--EGG--EVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDY- 75 (509)
T ss_dssp CCEEEEEECSSEEEEEEE--ETT--EEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCC-
T ss_pred CCEEEEEcCCceEEEEEE--ECC--EEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCc-
Confidence 469999999999999999 555 467899999999999999998889999999999999999 99999999999843
Q ss_pred hhHhhHhhcCCCceEeeCCCCceEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHHHHH
Q 004058 104 QVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQA 183 (776)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~A 183 (776)
. +.+ +|..++|+++++++|+++++.++.+++.++..+|||||++|++.||+++++|
T Consensus 76 -------------~----------~~~-~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a 131 (509)
T 2v7y_A 76 -------------K----------VEI-EGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA 131 (509)
T ss_dssp -------------C----------EEE-TTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred -------------E----------EEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 1 122 3356899999999999999999999999999999999999999999999999
Q ss_pred HHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCCC
Q 004058 184 AELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAEL 263 (776)
Q Consensus 184 a~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l 263 (776)
++.||++++++++||+|||++|+... ..+.++||||+||||||++++++. .+.++++++.++..+
T Consensus 132 ~~~AGl~~~~li~Ep~AAAlay~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~------------~g~~~v~a~~g~~~l 196 (509)
T 2v7y_A 132 GRIAGLEVERIINEPTAAALAYGLDK---EEDQTILVYDLGGGTFDVSILELG------------DGVFEVKATAGDNHL 196 (509)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTGGG---SCSEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEEEETTC
T ss_pred HHHcCCCeEEEecCHHHHHHHHhhcc---CCCCEEEEEECCCCeEEEEEEEEc------------CCeEEEEEecCCCCc
Confidence 99999999999999999999999875 246899999999999999999653 578899999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccC----cceEEEeeHHHH
Q 004058 264 GGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVD----IDFRSSITRQKF 339 (776)
Q Consensus 264 GG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~ef 339 (776)
||.+||+.|++|+.++|+.+ ++.++..+++++.+|+.+||++|+.||...+..+.++++.++ .++.++|||++|
T Consensus 197 GG~d~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~f 274 (509)
T 2v7y_A 197 GGDDFDQVIIDYLVNQFKQE--HGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKF 274 (509)
T ss_dssp SHHHHHHHHHHHHHHHHHHH--HSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHH
Confidence 99999999999999999988 677777889999999999999999999999999999877652 467789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhcC
Q 004058 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (776)
Q Consensus 340 e~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls~ 419 (776)
+++++|+++++..+|+++|+.+++...+|+.|+|+||+|++|+|++.|++.|+. ++..+.||++|||+|||++|+.+++
T Consensus 275 e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~-~~~~~~~p~~aVa~Gaa~~a~~l~~ 353 (509)
T 2v7y_A 275 EELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGK-EPHKGVNPDEVVAIGAAIQGGVIAG 353 (509)
T ss_dssp HHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSS-CCBCCSCTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCC-CcCcCCCchhhhHhhHHHHHHHhcC
Confidence 999999999999999999999999989999999999999999999999999985 6778999999999999999999987
Q ss_pred CccccCcceEEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeeccc----ceEEEEEeecCCCCCCCCCC
Q 004058 420 GIKLNRKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATS 495 (776)
Q Consensus 420 ~~~~~~~~~~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~ 495 (776)
. + +++.+.|++|++||+++.++.+ .+|||+|+++|++++..|++.. .+.|.+ |+|++.++. +|
T Consensus 354 ~--~-~~~~~~dv~p~slgi~~~~~~~-------~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v-~~ge~~~~~--~~ 420 (509)
T 2v7y_A 354 E--V-KDVVLLDVTPLSLGIETMGGVF-------TKLIERNTTIPTSKSQVFTTAADNQTTVDIHV-LQGERPMAA--DN 420 (509)
T ss_dssp C--C-CCCCCCCBCSSEEEEEETTTEE-------EEEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EEESSSBGG--GS
T ss_pred C--c-cCceEEEeeccccceeecCCce-------EEEEeCCCcCCcceEEEEEeeccCcEEEEEEE-EecCccccc--cC
Confidence 5 3 6789999999999999988765 3899999999999999998753 488899 999987766 58
Q ss_pred CceeEEEEcCCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhh
Q 004058 496 PVFAKYAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETA 575 (776)
Q Consensus 496 ~~i~~~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (776)
..||+|.+.|+|+.+ +| .| +|+|+|++|.||+|+|+..+..
T Consensus 421 ~~lg~~~l~~i~~~~-----~g--~~-~i~v~f~id~~gil~v~a~~~~------------------------------- 461 (509)
T 2v7y_A 421 KSLGRFQLTGIPPAP-----RG--VP-QIEVTFDIDANGIVHVRAKDLG------------------------------- 461 (509)
T ss_dssp EEEEEEEEECCCCCC-----TT--CS-CEEEEEEECTTSCEEEEEEETT-------------------------------
T ss_pred cEEEEEEEeCCCCCC-----Cc--cc-EEEEEEEEcCCceEEEEEEEcC-------------------------------
Confidence 999999999999875 33 56 8999999999999987643200
Q ss_pred hhcccccccccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHH
Q 004058 576 AQNMTVEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDA 655 (776)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~ 655 (776)
++ + ...++++. ...||+++++++
T Consensus 462 ------~g------------------------------------------~----~~~~~i~~-----~~~l~~~~i~~~ 484 (509)
T 2v7y_A 462 ------TN------------------------------------------K----EQSITIKS-----SSGLSEEEIQRM 484 (509)
T ss_dssp ------TC------------------------------------------C----EEEEEECS-----SCSCCSHHHHHH
T ss_pred ------CC------------------------------------------c----EEEEEEEe-----cCCCCHHHHHHH
Confidence 00 0 01345542 246999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHhhhh
Q 004058 656 EAKLEELDKKDADRRRTAELKNNLE 680 (776)
Q Consensus 656 ~~~~~~~~~~D~~~~~~~~akN~LE 680 (776)
.+++++|..+|+.++++.++||+||
T Consensus 485 ~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 485 IKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp HHHHHHSCGGGGGGGGCCCC-----
T ss_pred HHHHHHhhhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=8.5e-62 Score=541.41 Aligned_cols=379 Identities=32% Similarity=0.566 Sum_probs=343.4
Q ss_pred CCCcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCC
Q 004058 22 SQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKP 101 (776)
Q Consensus 22 ~~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~ 101 (776)
..+.+||||||||||+||++ .+| .++++.|+.|++++||+|+|.+++++||..|..++.++|.++++++|++||++
T Consensus 21 ~~~~viGID~GTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~ 96 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVF--QHG--KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRK 96 (404)
T ss_dssp --CCCEEEEECSSEEEEEEE--ETT--EEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCC
T ss_pred ccCCEEEEEcCCccEEEEEE--ECC--eeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCC
Confidence 45679999999999999999 655 57899999999999999999988999999999999999999999999999997
Q ss_pred chhhHhhHhhcCCCceEeeCCCCceEEEe--CCC-ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHH
Q 004058 102 FKQVKHLIDSLYLPFNVVEDSRGAVSFKI--DEN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERK 178 (776)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~ 178 (776)
+.+.........+||.+... ++...+.+ .+. ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+
T Consensus 97 ~~~~~~~~~~~~~p~~~~~~-~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~ 175 (404)
T 3i33_A 97 FEDATVQSDMKHWPFRVVSE-GGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQ 175 (404)
T ss_dssp TTSHHHHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHH
T ss_pred CCcHHHHHHHhhCCceEEcc-CCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHH
Confidence 76554445566899998863 45554444 332 679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceeeecchhHHHHHHhccccCCC-CCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEe
Q 004058 179 GLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFS-NESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDV 257 (776)
Q Consensus 179 ~l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~-~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~ 257 (776)
++++|++.||++++.+++||+|||++|+...... ..+..++|||+||||||++++++. .+.+++++.
T Consensus 176 ~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~------------~~~~~v~~~ 243 (404)
T 3i33_A 176 ATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIE------------DGIFEVKST 243 (404)
T ss_dssp HHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEE------------TTEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEe------------CCeEEEEEE
Confidence 9999999999999999999999999998876322 246899999999999999999764 678999999
Q ss_pred ecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHH
Q 004058 258 RWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQ 337 (776)
Q Consensus 258 ~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~ 337 (776)
.++..+||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.|+|+
T Consensus 244 ~~~~~lGG~~~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~ 321 (404)
T 3i33_A 244 AGDTHLGGEDFDNRMVSHLAEEFKRK--HKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRA 321 (404)
T ss_dssp EEETTCSHHHHHHHHHHHHHHHHHHH--HSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHH
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHH
Confidence 99999999999999999999999988 7788888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHh
Q 004058 338 KFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANL 417 (776)
Q Consensus 338 efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~l 417 (776)
+|+++++++++++..+|+++|+.+++...+|+.|+|+||+|++|+|++.|++.|+..++..+.||++|||+|||++|+.+
T Consensus 322 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l 401 (404)
T 3i33_A 322 RFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 401 (404)
T ss_dssp HHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999966678889999999999999999998
Q ss_pred cC
Q 004058 418 SD 419 (776)
Q Consensus 418 s~ 419 (776)
++
T Consensus 402 ~~ 403 (404)
T 3i33_A 402 IG 403 (404)
T ss_dssp C-
T ss_pred cC
Confidence 74
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.8e-61 Score=539.33 Aligned_cols=379 Identities=23% Similarity=0.386 Sum_probs=336.7
Q ss_pred CCcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCCc
Q 004058 23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (776)
.+.+||||||||||+||++ .+| +++++.|+.|.+++||+|+|.+++++||..|..+..++|.+++.++|++||+++
T Consensus 12 ~~~vvGIDlGTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~ 87 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHT--VDD--KAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDF 87 (409)
T ss_dssp -CCEEEEEECSSEEEEEEE--ETT--EEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCG
T ss_pred CCcEEEEEcCCCeEEEEEE--eCC--ceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCc
Confidence 4579999999999999998 444 688999999999999999999999999999999999999999999999999976
Q ss_pred hhhHhhHhhcCCCceEeeCCCCceEEEeCCC-------ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHH
Q 004058 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDEN-------NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQA 175 (776)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~ 175 (776)
.+...... .+++.+. ..+|.+.+.+..+ ..++|+++++++|+++++.++.+++.++.++|||||++|++.
T Consensus 88 ~~~~~~~~--~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~ 164 (409)
T 4gni_A 88 KSVDPTHN--HASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEK 164 (409)
T ss_dssp GGCCCGGG--TTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHH
T ss_pred cchhhhhh--cccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHH
Confidence 65433222 3444433 2367777877542 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEE
Q 004058 176 ERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVK 255 (776)
Q Consensus 176 qR~~l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~ 255 (776)
||+++++|++.|||+++.+++||+|||++|+........+..+||||+||||||++++++. .+.++++
T Consensus 165 ~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~------------~~~~~v~ 232 (409)
T 4gni_A 165 QKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASR------------SGMYTIL 232 (409)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEE------------TTEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEe------------CCeEEEE
Confidence 9999999999999999999999999999998764223456899999999999999999764 6789999
Q ss_pred EeecCCCCchHHHHHHHHHHHHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEE
Q 004058 256 DVRWDAELGGQNMELRLVEYFADEFNKQVGNG--VDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSS 333 (776)
Q Consensus 256 ~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~--~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~ 333 (776)
++.++..+||.+||+.|++++..+|..+ ++ .+...+++.+.+|+.+||++|+.||.+..+.+.++++.++.++...
T Consensus 233 ~~~~~~~lGG~~~d~~i~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~ 310 (409)
T 4gni_A 233 ATVHDYEYHGIALDKVLIDHFSKEFLKK--NPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFAST 310 (409)
T ss_dssp EEEEESSSSHHHHHHHHHHHHHHHHHHH--STTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEE
T ss_pred EecCCCCcCHHHHHHHHHHHHHHHHHHH--hCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEE
Confidence 9999999999999999999999999988 66 7777889999999999999999999999999999999999999999
Q ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCC-cc------CCCCCcchhH
Q 004058 334 ITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT-EL------DRHLDADEAI 406 (776)
Q Consensus 334 itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~-~i------~~~~n~deav 406 (776)
|||++|+++++++++++..+|+++|+.+++...+|+.|+|+||+|++|+|++.|++.|+.. ++ ....||++||
T Consensus 311 itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~av 390 (409)
T 4gni_A 311 INRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQ 390 (409)
T ss_dssp EEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHH
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999875 34 6789999999
Q ss_pred HhHHHHHHHHhcCCcc
Q 004058 407 VLGASLLAANLSDGIK 422 (776)
Q Consensus 407 a~GAa~~aa~ls~~~~ 422 (776)
|+|||++|+......+
T Consensus 391 a~GAa~~~~~~~~~~~ 406 (409)
T 4gni_A 391 ARGAALQASLIQEHHH 406 (409)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHhhhhhhhhc
Confidence 9999999998776543
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=3.8e-60 Score=526.51 Aligned_cols=374 Identities=34% Similarity=0.592 Sum_probs=341.4
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCCch
Q 004058 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFK 103 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~ 103 (776)
..+||||||||||+||++ .+| .++++.|..|++++||+|+|.+++++||..|......+|.++++++|++||+++.
T Consensus 18 ~~viGID~GTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~ 93 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVM--KNG--KTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYN 93 (394)
T ss_dssp CSCEEEEECSSEEEEEEE--CSS--CEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTT
T ss_pred CCEEEEEeCcCcEEEEEE--ECC--eeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCC
Confidence 568999999999999999 655 4789999999999999999999999999999999999999999999999999765
Q ss_pred hhHhhHhhcCCCceEeeCCCCceEEEeC--CC-ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHH
Q 004058 104 QVKHLIDSLYLPFNVVEDSRGAVSFKID--EN-NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (776)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l 180 (776)
+.........+||.++ +.++...+.+. +. ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++
T Consensus 94 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~ 172 (394)
T 3qfu_A 94 DRSVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQAT 172 (394)
T ss_dssp CHHHHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred cHHHHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHH
Confidence 5444445668999988 34555555443 32 57999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecC
Q 004058 181 MQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260 (776)
Q Consensus 181 ~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 260 (776)
++|++.||++++.+++||+|||++|+... ...+.+++|||+||||||++++++. .+.+++++..++
T Consensus 173 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~--~~~~~~vlV~D~Gggt~dvsv~~~~------------~~~~~~~~~~~~ 238 (394)
T 3qfu_A 173 KDAGTIAGLNVLRIVNEPTAAAIAYGLDK--SDKEHQIIVYDLGGGTFDVSLLSIE------------NGVFEVQATSGD 238 (394)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTTTS--CSSCEEEEEEEECSSCEEEEEEEEE------------TTEEEEEEEEEE
T ss_pred HHHHHHcCCceEEEecCHHHHHHHHhhcc--CCCCceEEEEEcCCCceeEEEEEEe------------CCEEEEEEEcCC
Confidence 99999999999999999999999998765 2346889999999999999999664 678999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHHHH
Q 004058 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFE 340 (776)
Q Consensus 261 ~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe 340 (776)
..+||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.|+|++|+
T Consensus 239 ~~lGG~~~d~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~ 316 (394)
T 3qfu_A 239 THLGGEDFDYKIVRQLIKAFKKK--HGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFE 316 (394)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHH--HSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHH--cCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHH
Confidence 99999999999999999999988 7788888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhc
Q 004058 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 341 ~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls 418 (776)
++++++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|+..++..+.||++|||+|||++|+.++
T Consensus 317 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 317 ELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999899999999999999999999999999666788899999999999999999875
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=3.3e-59 Score=516.78 Aligned_cols=377 Identities=28% Similarity=0.508 Sum_probs=333.3
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEe-CCceEEcHhHHHhHhhCcchHHHHHHHhhCCCc
Q 004058 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFH-ESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (776)
+.+||||||||||+||++ .+| .++++.|++|.+++||+|+|. +++++||..|.....++|.++++++|++||+.+
T Consensus 2 ~~~vGIDlGTt~s~va~~--~~g--~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~ 77 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIM--DGT--TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRF 77 (383)
T ss_dssp -CCCEEECCSSEEEEEEE--ETT--EEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBS
T ss_pred CcEEEEEcCCCCEEEEEE--ECC--eeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCC
Confidence 358999999999999999 555 468888999999999999995 578999999999999999999999999999965
Q ss_pred hhhHhhHhhcCCCceEeeCCCCceEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHHHH
Q 004058 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQ 182 (776)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~ 182 (776)
.+.........+||.++.+.++.+.+.+ +|..++|+++++++|+++++.++.+++.++..+|||||++|++.||+++++
T Consensus 78 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~ 156 (383)
T 1dkg_D 78 QDEEVQRDVSIMPFKIIAADNGDAWVEV-KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (383)
T ss_dssp CSHHHHHHTTTCSSEEEECSSSBEEEEE-TTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHH
T ss_pred CcHHHHHHhhcCCeEEEEcCCCcEEEEE-CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 4332223445789999888888888888 456899999999999999999999998888999999999999999999999
Q ss_pred HHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCC
Q 004058 183 AAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAE 262 (776)
Q Consensus 183 Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 262 (776)
|++.||++++.+++||+|||++|+.... ..+.++||||+||||||++++++... ...+.++++++.++..
T Consensus 157 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~~lVvD~Gggttdvsv~~~~~~--------~~~~~~~v~~~~~~~~ 226 (383)
T 1dkg_D 157 AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIEIDEV--------DGEKTFEVLATNGDTH 226 (383)
T ss_dssp HHHHTTCEESCCCBHHHHHHHHHTCCC---CCEEEEEEEEECSSCEEEEEEEEEC------------CCCEEEEEEEESS
T ss_pred HHHHcCCceEEEeccHHHHHHHHHhccC--CCCcEEEEEEcCCCeEEEEEEEEEec--------CCCCeEEEEEEeCCCC
Confidence 9999999999999999999999987652 24678999999999999999976421 1135788899889889
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeeccc---C-cceEEEeeHHH
Q 004058 263 LGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYV---D-IDFRSSITRQK 338 (776)
Q Consensus 263 lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~---~-~d~~~~itr~e 338 (776)
+||.+||+.|++++.++|..+ ++.++..+++.+.+|+.+||++|+.|+...+..+.++.+.+ + .++.+.|+|++
T Consensus 227 lGG~~id~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~ 304 (383)
T 1dkg_D 227 LGGEDFDSRLINYLVEEFKKD--QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304 (383)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH--HCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHH
Confidence 999999999999999999888 67778888999999999999999999999888888887664 2 45678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhc
Q 004058 339 FEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 339 fe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls 418 (776)
|+++++|+++++.++|+++|+.+++...+|+.|+|+||+|++|+|++.|++.|+. ++..+.||++|||+|||++|+.++
T Consensus 305 ~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~-~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 305 LESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-EPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSS-CCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCC-CCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999888999999999999999999999999985 677889999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1e-39 Score=355.31 Aligned_cols=311 Identities=20% Similarity=0.274 Sum_probs=239.2
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCC--ce-EEcHhHHHhHhhCcchHHHHHHHhhCC
Q 004058 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHES--TR-LLGEEASGIIARYPHRVYSQLRDMIGK 100 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~--~~-~~G~~A~~~~~~~p~~~~~~~K~llG~ 100 (776)
+.+|||||||+||++++. ++ + .+ . .+||+|+|.++ ++ ++|.+|..+..++|.++..
T Consensus 3 ~~~igIDlGT~~s~v~~~----~~-~-~~-~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~-------- 61 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLR----GK-G-IV-V------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA-------- 61 (344)
T ss_dssp -CEEEEEECSSEEEEEET----TT-E-EE-E------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE--------
T ss_pred CceEEEEcCcCcEEEEEC----CC-C-EE-E------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE--------
Confidence 368999999999999875 32 2 22 2 27999999754 44 7999998776666655321
Q ss_pred CchhhHhhHhhcCCCceEeeCCCCceEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHH
Q 004058 101 PFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGL 180 (776)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l 180 (776)
..|++ +|. +. ....++++++++|++++.. ..++ ...+|||||++|++.||+++
T Consensus 62 ------------~~p~~-----~g~----i~--~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~ 114 (344)
T 1jce_A 62 ------------IRPMR-----DGV----IA--DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAI 114 (344)
T ss_dssp ------------ECCEE-----TTE----ES--SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHH
T ss_pred ------------EecCC-----CCe----eC--ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHH
Confidence 11211 121 11 1224677777777766542 1233 36899999999999999999
Q ss_pred HHHHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecC
Q 004058 181 MQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWD 260 (776)
Q Consensus 181 ~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 260 (776)
++|++.||++++.+++||+|||++|+... ..+..++|||+||||||+++++.. .+ + ..++
T Consensus 115 ~~a~~~aG~~~~~li~ep~Aaa~~~~~~~---~~~~~~lVvDiGggttdvsv~~~~--------------~~--~-~~~~ 174 (344)
T 1jce_A 115 LDAGLEAGASKVFLIEEPMAAAIGSNLNV---EEPSGNMVVDIGGGTTEVAVISLG--------------SI--V-TWES 174 (344)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHHHHTTCCT---TSSSCEEEEEECSSCEEEEEEETT--------------EE--E-EEEE
T ss_pred HHHHHHcCCCeEeccCCHHHHHHhcCCCC---CCCceEEEEEeCCCeEEEEEEEcC--------------CE--E-eeCC
Confidence 99999999999999999999999998754 345789999999999999999532 11 1 2345
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCc------eeEEEe--ecccCcceEE
Q 004058 261 AELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTM------APISVE--SLYVDIDFRS 332 (776)
Q Consensus 261 ~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~------~~i~i~--~l~~~~d~~~ 332 (776)
..+||.+||+.|.+++.+++... +. +..||++|+.|+.... ..+.++ ++.++.++.+
T Consensus 175 ~~lGG~~id~~l~~~l~~~~~~~------~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 239 (344)
T 1jce_A 175 IRIAGDEMDEAIVQYVRETYRVA------IG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKL 239 (344)
T ss_dssp ESCSHHHHHHHHHHHHHHHHCEE------CC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEE
T ss_pred CCccChhHHHHHHHHHHHHhCcc------cC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeE
Confidence 68999999999999998876322 21 4689999999987643 244443 4557777889
Q ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCc-cEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhH
Q 004058 333 SITRQKFEELCEDLWERSLVPLREVLNYSGLK--MDEI-YAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLG 409 (776)
Q Consensus 333 ~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~--~~~i-~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~G 409 (776)
+|+|++|+++++|.++++.++|+++|+.++.. .+.+ +.|+|+||+|++|.|++.|++.|+. ++....||+++||+|
T Consensus 240 ~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~-~v~~~~~p~~ava~G 318 (344)
T 1jce_A 240 TLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI-SVIRSEEPLTAVAKG 318 (344)
T ss_dssp EEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS-CEEECSSTTTHHHHH
T ss_pred EEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCC-CccccCChHHHHHHH
Confidence 99999999999999999999999999987532 2234 6899999999999999999999986 566788999999999
Q ss_pred HHHHHHHhc
Q 004058 410 ASLLAANLS 418 (776)
Q Consensus 410 Aa~~aa~ls 418 (776)
|+++|+.++
T Consensus 319 aa~~a~~~~ 327 (344)
T 1jce_A 319 AGMVLDKVN 327 (344)
T ss_dssp HHHGGGCHH
T ss_pred HHHHHhChH
Confidence 999998655
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.97 E-value=9.2e-31 Score=261.80 Aligned_cols=211 Identities=12% Similarity=0.239 Sum_probs=182.0
Q ss_pred eEEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeeccc----ceEEEEEeecCCCCCCCCCCCceeEEEE
Q 004058 428 GMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAKYAV 503 (776)
Q Consensus 428 ~~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~~~i~~~~i 503 (776)
.+.|++|+++||++.++.+. +|||+|++||++++.+|++.. .+.|.+ |+|++.++. +|..||+|.+
T Consensus 2 ~l~DV~p~slGie~~gg~~~-------~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--dn~~Lg~f~l 71 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMT-------TLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--DNKSLGQFNL 71 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEE
T ss_pred eEEEecCcEEEEEEeCCEEE-------EEEeCcCcccEeEEEEEEeCCCCCceEEEEE-EEcCCcccc--cCCEEEEEEE
Confidence 57899999999999988653 999999999999999998764 489999 999998876 6999999999
Q ss_pred cCCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhhhhcccccc
Q 004058 504 SGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEA 583 (776)
Q Consensus 504 ~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (776)
.|+|+++ +| .| .|+|+|++|.||+|+|+..+.. ++
T Consensus 72 ~gipp~p-----~G--~~-~IeVtf~iD~nGiL~V~a~d~~-------------------------------------tg 106 (219)
T 4e81_A 72 DGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKDKN-------------------------------------SG 106 (219)
T ss_dssp ECCCCCS-----TT--CS-CEEEEEEECTTCCEEEEEEETT-------------------------------------TC
T ss_pred eCCCCCC-----CC--Cc-eEEEEEEeCCCCCEeeeeeccc-------------------------------------cC
Confidence 9999886 34 56 8999999999999987644310 00
Q ss_pred cccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhh
Q 004058 584 NENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELD 663 (776)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~ 663 (776)
+ +..++++. ...||++++++|.+++++|+
T Consensus 107 ~----------------------------------------------~~~i~I~~-----~~~Ls~eeI~~m~~~a~~~~ 135 (219)
T 4e81_A 107 K----------------------------------------------EQKITIKA-----SSGLNEDEIQKMVRDAEANA 135 (219)
T ss_dssp C----------------------------------------------EEEEEECT-----TCSCCHHHHHHHHHHHHHTH
T ss_pred c----------------------------------------------cceEeeec-----cccccHHHHHHHHHHHHHhh
Confidence 0 01456542 23599999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhh
Q 004058 664 KKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGD 743 (776)
Q Consensus 664 ~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~k~~~L~~~~~ 743 (776)
.+|+.++++.++||.||+|+|++|+.|++ +..+++++++++|.+.|.++++||+++ ++++|++++++|++++.
T Consensus 136 ~eD~~~r~~~e~kn~le~~i~~~~~~l~~---~~~~l~~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~ 208 (219)
T 4e81_A 136 EADRKFEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQ 208 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999974 778899999999999999999999976 69999999999999999
Q ss_pred HHHHHHHh
Q 004058 744 PVFFRFKE 751 (776)
Q Consensus 744 pi~~R~~e 751 (776)
||..|+++
T Consensus 209 ~i~~~~~~ 216 (219)
T 4e81_A 209 KLMEIAQQ 216 (219)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhc
Confidence 99999876
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.97 E-value=3.9e-29 Score=252.72 Aligned_cols=211 Identities=13% Similarity=0.188 Sum_probs=179.6
Q ss_pred EeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeeccc----ceEEEEEeecCCCCCCCCCCCceeEEEEcC
Q 004058 430 VDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAKYAVSG 505 (776)
Q Consensus 430 ~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~~~i~~~~i~~ 505 (776)
.|++||+|||++.++.+. +|||+|++||++++.+|++.. .+.|.+ |+|++.++. +|..||+|.|.|
T Consensus 1 ~Dv~p~slGie~~~g~~~-------~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v-~qGe~~~~~--~n~~Lg~f~l~g 70 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVE-------KVIPRNTTIPVARAQDFTTFKDGQTAMSIHV-MQGERELVQ--DCRSLARFALRG 70 (227)
T ss_dssp CCBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEEECSSTTCCCEEEEE-EECSSSBGG--GSEEEEEEEECC
T ss_pred CCcccceEEEEEeCCEEE-------EEEeCcCccCceEEEEEEecCCCceEEEEEE-EecCCccCC--CCCEEEEEEEeC
Confidence 389999999999887653 899999999999999999864 489999 999988876 589999999999
Q ss_pred CccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhhhhcccccccc
Q 004058 506 LAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEANE 585 (776)
Q Consensus 506 i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (776)
+++++ +| .| +|+|+|++|.||+|+|+..+.. ++
T Consensus 71 i~~~p-----~G--~~-~I~Vtf~iD~nGiL~V~a~d~~-------------------------------------tg-- 103 (227)
T 1u00_A 71 IPALP-----AG--GA-HIRVTFQVDADGLLSVTAMEKS-------------------------------------TG-- 103 (227)
T ss_dssp CCCCS-----TT--CS-CEEEEEEECTTCCEEEEEEETT-------------------------------------TC--
T ss_pred CCCCC-----CC--ce-EEEEEEEECCCCcEEEEeeccc-------------------------------------cc--
Confidence 99876 34 56 8999999999999987644200 00
Q ss_pred cccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhhHH
Q 004058 586 NLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDKK 665 (776)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~ 665 (776)
+ ...++++. ..+||+++++++.+++++|..+
T Consensus 104 ----------------------------------------~----~~~i~i~~-----~~~Ls~eei~~~~~~~~~~~~~ 134 (227)
T 1u00_A 104 ----------------------------------------V----EASIQVKP-----SYGLTDSEIASMIKDSMSYAEQ 134 (227)
T ss_dssp ----------------------------------------C----EEEEEECC-----CSCCCHHHHHHHHHHHHHTHHH
T ss_pred ----------------------------------------c----cceEEEEe-----ccCCCHHHHHHHHHHHHhhhcc
Confidence 0 01355542 2359999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHH
Q 004058 666 DADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPV 745 (776)
Q Consensus 666 D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~k~~~L~~~~~pi 745 (776)
|+.++++.++||.||+|||++|+.|++ +..+++++++++|.++|+++++|||++ ++++|++++++|++++.||
T Consensus 135 D~~~~e~~e~kn~le~~i~~~~~~l~~---~~~~~~~~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i 207 (227)
T 1u00_A 135 DVKARMLAEQKVEAARVLESLHGALAA---DAALLSAAERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDF 207 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999974 678899999999999999999999954 4899999999999999999
Q ss_pred HHHHHhhh
Q 004058 746 FFRFKELT 753 (776)
Q Consensus 746 ~~R~~e~~ 753 (776)
..|+....
T Consensus 208 ~~r~~~~~ 215 (227)
T 1u00_A 208 AARRMDQS 215 (227)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99876443
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.94 E-value=6.8e-27 Score=253.19 Aligned_cols=231 Identities=19% Similarity=0.144 Sum_probs=167.4
Q ss_pred ccHHHHHHHHHHHHHHHHHhhcCCCCCcEE--EEcCCCCCHHHHHHHHHHHHHh--------C------CceeeecchhH
Q 004058 136 FSVEELLAMVLSYAVNLVDTHAKLAVKDFV--ISVPPYFGQAERKGLMQAAELA--------G------MNVLSLVNEHS 199 (776)
Q Consensus 136 ~~~eel~a~~L~~l~~~a~~~~~~~~~~~V--itVPa~f~~~qR~~l~~Aa~~A--------G------l~~~~li~Ep~ 199 (776)
+..+...++++..|+..++...+.+ .++| |+||++|+..||+++++|+..+ | ++.+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 4446677788887776653333333 4699 9999999999999999997665 4 34588999999
Q ss_pred HHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHH
Q 004058 200 GAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADE 279 (776)
Q Consensus 200 AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 279 (776)
|||++|.......+....++|||+||||||++++++ .++. .+....++..+||.+|++.|.+++.++
T Consensus 174 AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~------------~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 174 GAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINL------------MDME-PVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp HHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEET------------TTTE-ECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccccccCCcEEEEECCCCcEEEEEEEe------------cCCE-EEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 999998222222223478999999999999999953 2333 344445666899999999999888777
Q ss_pred HhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHHH-HHHHHHHHHHHHHHHHHHH
Q 004058 280 FNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKF-EELCEDLWERSLVPLREVL 358 (776)
Q Consensus 280 ~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~ef-e~l~~~~~~~i~~~i~~~l 358 (776)
+... . ++. ...+| . ...+.+ .+. .++++++ +++++++++++.+.|+++|
T Consensus 241 ~g~~--~--~i~---------~~~~e-------~--~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l 290 (346)
T 2fsj_A 241 TGFV--V--PFD---------LAQEA-------L--SHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNL 290 (346)
T ss_dssp HCCC--C--CHH---------HHHHH-------T--TSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCC--c--CCC---------HHHHh-------c--CCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5320 0 211 11122 1 112222 232 3569999 9999999999999999999
Q ss_pred HHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCcc-CCCCCcchhHHhHHHHHHH
Q 004058 359 NYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTEL-DRHLDADEAIVLGASLLAA 415 (776)
Q Consensus 359 ~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i-~~~~n~deava~GAa~~aa 415 (776)
+.+ .++++.|+|+||++++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 291 ~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 291 RGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred Hhh---hhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 876 5578999999999999 99999999974332 2267999999999998764
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.93 E-value=3e-25 Score=244.21 Aligned_cols=299 Identities=16% Similarity=0.174 Sum_probs=192.2
Q ss_pred CCcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCCc
Q 004058 23 QSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (776)
...++|||+||++++++++ ..+ . +.+ +..|.+.+|+.+. .++ ...++..+...+|+++++..
T Consensus 12 ~~~~vgiDiGt~~i~~~~~--~~~-~-~~i--~~~g~~~~ps~~~-~~g-----------~i~d~~~~~~~ik~~~~~~~ 73 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEV--SGN-P-PAL--KALASRPTPPGLL-MEG-----------MVAEPAALAQEIKELLLEAR 73 (377)
T ss_dssp CCCCEEEEECSSEEEEEEE--ETT-T-TEE--EEEEEEECCTTSE-ETT-----------EESCHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCeEEEEEE--eCC-c-eEE--EEEEeEECCCCcc-cCC-----------CcCCHHHHHHHHHHHHHHcC
Confidence 3468999999999999998 544 2 223 2335555666431 222 23567888889999887610
Q ss_pred hhhHhhHhhcCCCceEeeCCCCceEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHH------
Q 004058 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAE------ 176 (776)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~q------ 176 (776)
. ....-.+.-+...+..+......++++++-..+ +..++.+++.++.+++|.+|. .+.+
T Consensus 74 --------~-~~~~v~~~i~~~~~~~~~~~~~~v~~~el~~~i----~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~ 138 (377)
T 2ych_A 74 --------T-RKRYVVTALSNLAVILRPIQVPKMPLKEMEEAV----RWEAERYIPFPIDEVVLDFAP--LTPLSEVQEG 138 (377)
T ss_dssp --------C-CCCEEEEEECGGGCEEEEEEEECCCHHHHHHHH----HHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTT
T ss_pred --------C-CcceEEEEecCCcEEEEEEECCCCCHHHHHHHH----HHHHhhcCCCChhHceEEEEE--eCCCCCCCCc
Confidence 0 000001111111111110001347788776543 346777888889999999973 3222
Q ss_pred --------------HHHHHHHHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccc
Q 004058 177 --------------RKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKV 242 (776)
Q Consensus 177 --------------R~~l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~ 242 (776)
.+++++|++.|||++..++.||+|||++|+.... ...+..++|||+||||||+++++
T Consensus 139 ~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~-~~~~~~~~vvDiGggttdi~i~~-------- 209 (377)
T 2ych_A 139 EQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLA-EEPDRVFLVLDIGAESTSLVLLR-------- 209 (377)
T ss_dssp SEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHH-TSTTCEEEEEEECSSCEEEEEEE--------
T ss_pred ceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcc-cccCCeEEEEEECCCcEEEEEEE--------
Confidence 3889999999999999999999999999865331 12346799999999999999994
Q ss_pred cCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEe
Q 004058 243 YGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVE 322 (776)
Q Consensus 243 ~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~ 322 (776)
.+.+. ..++..+||.+||+.|++. ++.+ +.+||++|+.++.........+
T Consensus 210 ------~g~~~---~~~~~~~GG~~i~~~i~~~----------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~ 259 (377)
T 2ych_A 210 ------GDKPL---AVRVLTLSGKDFTEAIARS----------FNLD-----------LLAAEEVKRTYGMATLPTEDEE 259 (377)
T ss_dssp ------TTEEE---EEEEESCSHHHHHHHHHHH----------TTCC-----------HHHHHHHHHHTC----------
T ss_pred ------CCEEE---EEEeeechHHHHHHHHHHH----------hCCC-----------HHHHHHHHhhcccccccccccc
Confidence 23221 2345689999999999862 2222 4689999999875432111100
Q ss_pred ecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 323 SLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYS--GLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 323 ~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a--~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
...+-.+....++|++|++++++.++++...|++.|+.. +.....++.|+|+||++++|.+++.+++.|+.
T Consensus 260 ~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~ 332 (377)
T 2ych_A 260 LLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGV 332 (377)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTS
T ss_pred cccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCC
Confidence 001111234589999999999999999999999999853 56666899999999999999999999999985
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.93 E-value=3e-24 Score=225.19 Aligned_cols=202 Identities=18% Similarity=0.273 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHHHHHHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEE
Q 004058 140 ELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVV 219 (776)
Q Consensus 140 el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vl 219 (776)
+....+|+++++.++...+..+..+++++|++|+..+|+++.++++.+|+++..++.||+|++++|+.. ..+
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~--------~~~ 142 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN--------DGI 142 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS--------SEE
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC--------CEE
Confidence 456788889998888887878889999999999999999999999999999999999999999988653 259
Q ss_pred EEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 004058 220 FYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAK 299 (776)
Q Consensus 220 V~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~k 299 (776)
|+|+|||||+++++. .+.+. ......+||.+||+.|.+++. .+
T Consensus 143 viDiGggst~~~~~~--------------~g~~~---~~~~~~~Gg~~~~~~l~~~l~----------~~---------- 185 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIE--------------KGKIT---ATFDEPTGGTHLSLVLAGSYK----------IP---------- 185 (272)
T ss_dssp EEEECSSCEEEEEEE--------------TTEEE---EECCBSCCHHHHHHHHHHHHT----------CC----------
T ss_pred EEEECCCcEEEEEEE--------------CCEEE---EEecCCCcHHHHHHHHHHHhC----------CC----------
Confidence 999999999999984 23222 345668999999999987763 11
Q ss_pred HHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccC
Q 004058 300 LKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTR 379 (776)
Q Consensus 300 L~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sr 379 (776)
...|+++|+.++ ++++|++++.++++++...+.+.++..+ +++.|+|+||+++
T Consensus 186 -~~~ae~~k~~~~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~ 238 (272)
T 3h1q_A 186 -FEEAETIKKDFS----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAY 238 (272)
T ss_dssp -HHHHHHHHHSST----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGG
T ss_pred -HHHHHHHHHhcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccc
Confidence 357888998875 5899999999999999999999998663 4779999999999
Q ss_pred cHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHH
Q 004058 380 VPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLA 414 (776)
Q Consensus 380 iP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~a 414 (776)
+|.+++.|++.|+. ++..+.||++++|+|||++|
T Consensus 239 ~~~l~~~l~~~l~~-~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 239 LTGFSEEFSRFLGK-EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp STTHHHHHHHHHSS-CCBCCSSGGGHHHHHHHTTC
T ss_pred hhhHHHHHHHHhCC-CccccCChHHHHHHHHHhcC
Confidence 99999999999986 67778999999999999864
No 16
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.91 E-value=1.1e-24 Score=243.05 Aligned_cols=228 Identities=17% Similarity=0.154 Sum_probs=163.9
Q ss_pred CCcEEEEcCCCCCHHHHHHHHHHH-HHhCCceeeecchhHHHHHH-hccccCCCCCCcEEEEEEecCccceeeEEEEeec
Q 004058 161 VKDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQ-YGIDKDFSNESRHVVFYDMGATTTYAALVYFSAY 238 (776)
Q Consensus 161 ~~~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AAAl~-y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~ 238 (776)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ......+.+.+|||+||||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~-~~~~~~~~~glVvDiG~gtt~v~~v~---- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS-RQVGERTLTGTVIDSGDGVTHVIPVA---- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS-TTCCSCCCCEEEEEESSSCEEEEEEE----
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc-cccCCCCCeEEEEEcCCCceEEEEeE----
Confidence 357999999999999999999999 88999999999999999987 422 11111122679999999999999983
Q ss_pred cccccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCC---
Q 004058 239 NAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANT--- 315 (776)
Q Consensus 239 ~~~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~--- 315 (776)
.|. .+........+||++||+.|.+++..++ +...... -...+|++|+.++...
T Consensus 182 ----------~G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~-----~~~~~~~-------~~~~~e~iK~~~~~v~~~~ 238 (418)
T 1k8k_A 182 ----------EGY-VIGSCIKHIPIAGRDITYFIQQLLRDRE-----VGIPPEQ-------SLETAKAVKERYSYVCPDL 238 (418)
T ss_dssp ----------TTE-ECGGGCEEESCSHHHHHHHHHHHHHTTC-----CCCCGGG-------HHHHHHHHHHHHCCCCSCH
T ss_pred ----------CCE-EcccceEEEeCcHHHHHHHHHHHHHhcC-----CCCCCHH-------HHHHHHHHHHhhchhcccH
Confidence 221 1112224458999999999999987653 2111111 1356777887775421
Q ss_pred --------------ceeEEEeecccCcceEEEeeHHHH---HHHHHHH------HHHHHHHHHHHHHHCC--CCCCCccE
Q 004058 316 --------------MAPISVESLYVDIDFRSSITRQKF---EELCEDL------WERSLVPLREVLNYSG--LKMDEIYA 370 (776)
Q Consensus 316 --------------~~~i~i~~l~~~~d~~~~itr~ef---e~l~~~~------~~~i~~~i~~~l~~a~--~~~~~i~~ 370 (776)
...+.++....+.++.+.|++++| |.+++|. +..+.++|.++|..+. +....++.
T Consensus 239 ~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~ 318 (418)
T 1k8k_A 239 VKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKN 318 (418)
T ss_dssp HHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHC
T ss_pred HHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhc
Confidence 134566655555667889999999 5554443 2568888999998864 34556788
Q ss_pred EEEecCccCcHHHHHHHHHHhCCC-----------------------ccCCCCCcchhHHhHHHHHHHH
Q 004058 371 VELIGGGTRVPKLQAKLQEYLGRT-----------------------ELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 371 V~LvGG~sriP~v~~~l~~~f~~~-----------------------~i~~~~n~deava~GAa~~aa~ 416 (776)
|+|+||+|++|.+++.|++.++.. ++..+.++..++.+||+++|..
T Consensus 319 IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 319 IVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp EEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred eEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 999999999999999988755321 2233457789999999999863
No 17
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.91 E-value=4.6e-24 Score=206.01 Aligned_cols=161 Identities=20% Similarity=0.328 Sum_probs=131.0
Q ss_pred CcceEEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeecccc----eEEEEEeecCCCCCCCCCCCceeE
Q 004058 425 RKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAK 500 (776)
Q Consensus 425 ~~~~~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~ 500 (776)
..+.+.|++|++||+++.++.+. +|||+|++||++++.+|++..| +.|.+ |+|++.++. +|..||+
T Consensus 18 ~~f~l~DV~P~slGie~~gg~~~-------~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~V-yqGE~~~~~--dn~~LG~ 87 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGGVFT-------KLINRNTTIPTKKSQVFSTAADGQTQVEIKV-CQGEREMAG--DNKLLGQ 87 (182)
T ss_dssp ------CBCSSCEEEECTTSBEE-------EEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGG--GSEEEEE
T ss_pred CCEEEEEecCCEEEEEEeCCEEE-------EEEeCCCccCEEEEEEEEECCCCccEEEEEE-EEcCccccc--cCceEEE
Confidence 57889999999999999887653 8999999999999999988654 99999 999998876 6899999
Q ss_pred EEEcCCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhhhhccc
Q 004058 501 YAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMT 580 (776)
Q Consensus 501 ~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (776)
|.|.|+|+++ +| .| +|+|+|.+|.||+|.|+..+..
T Consensus 88 f~l~gipp~p-----~G--~~-~IeVtf~iD~nGiL~VsA~d~~------------------------------------ 123 (182)
T 3n8e_A 88 FTLIGIPPAP-----RG--VP-QIEVTFDIDANGIVHVSAKDKG------------------------------------ 123 (182)
T ss_dssp EEECCCCCCC-----TT--CS-CEEEEEEECTTCCEEEEEEETT------------------------------------
T ss_pred EEEcCCCCCC-----CC--Ce-eEEEEEEEecCCEEEEEEEEcC------------------------------------
Confidence 9999999886 34 56 8999999999999987644310
Q ss_pred ccccccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHH
Q 004058 581 VEANENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLE 660 (776)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~ 660 (776)
+++ +..|+++. ...||++++++|+++++
T Consensus 124 -tg~----------------------------------------------~~~i~I~~-----~~~Ls~eei~~mi~~a~ 151 (182)
T 3n8e_A 124 -TGR----------------------------------------------EQQIVIQS-----SGGLSKDDIENMVKNAE 151 (182)
T ss_dssp -TCC----------------------------------------------EEEEEESC-----CCCCCHHHHHHHHHHHH
T ss_pred -CCC----------------------------------------------EeeEEEec-----CccCCHHHHHHHHHHHH
Confidence 000 01456542 24699999999999999
Q ss_pred HhhHHHHHHHHHHHHHhhhhhHHHHHHhhcc
Q 004058 661 ELDKKDADRRRTAELKNNLEGYIYATKEKFE 691 (776)
Q Consensus 661 ~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~ 691 (776)
+|+++|++++++.++||.||+|||++|+.|+
T Consensus 152 ~~~~eD~~~~~~~e~kn~le~~iy~~~~~l~ 182 (182)
T 3n8e_A 152 KYAEEDRRKKERVEAVNMAEGIIHDTETKME 182 (182)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999874
No 18
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=3e-24 Score=235.58 Aligned_cols=307 Identities=14% Similarity=0.164 Sum_probs=193.5
Q ss_pred CcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccce-EEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCCc
Q 004058 24 SAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPA-LVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPF 102 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS-~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~ 102 (776)
...|+||+||+++++++. ..+ .|..++++--|..+.++ .+.+.+...++|.+|.... .. ..+
T Consensus 5 ~~~ivID~Gs~~~k~G~~--~~~-~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~-------- 67 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFA--GDD-APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTL-------- 67 (375)
T ss_dssp CCCEEEEECSSEEEEEET--TCS-SCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEE--------
T ss_pred CceEEEECCCCeEEEEEC--CCC-CCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cce--------
Confidence 357999999999999997 333 45445544333333322 1222334567888876430 00 000
Q ss_pred hhhHhhHhhcCCCceEeeCCCCceEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCC--CCcEEEEcCCCCCHHHHHHH
Q 004058 103 KQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLA--VKDFVISVPPYFGQAERKGL 180 (776)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~--~~~~VitVPa~f~~~qR~~l 180 (776)
..|+ .+|..... +.+..+++|+.. ..++.. ...++||+|++++..+|+++
T Consensus 68 ----------~~Pi--------------~~G~i~d~-d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~ 119 (375)
T 2fxu_A 68 ----------KYPI--------------EHGIITNW-DDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKM 119 (375)
T ss_dssp ----------ECSE--------------ETTEECCH-HHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHH
T ss_pred ----------eccc--------------cCCcccCH-HHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHH
Confidence 1111 12211111 233445555542 223322 24599999999999999988
Q ss_pred HHHH-HHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeec
Q 004058 181 MQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRW 259 (776)
Q Consensus 181 ~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~ 259 (776)
.+++ +.+|++.+.+++||+|||++|+. .+.+|||+|+||||++.+. .|. .+.....
T Consensus 120 ~e~~fe~~g~~~~~~~~e~~aaa~a~g~--------~~~lVvDiG~gtt~v~~v~--------------~G~-~~~~~~~ 176 (375)
T 2fxu_A 120 TQIMFETFNVPAMYVAIQAVLSLYASGR--------TTGIVLDSGDGVTHNVPIY--------------EGY-ALPHAIM 176 (375)
T ss_dssp HHHHHHTTCCSEEEEEEHHHHHHHHTTC--------SSEEEEEECSSCEEEEEEE--------------TTE-ECGGGCE
T ss_pred HHHHHHhcCcceEEEccchheeeeecCC--------CeEEEEEcCCCceEEeEeE--------------CCE-EeccceE
Confidence 8764 77899999999999999999874 3589999999999998873 332 2222223
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhcc----------------CCCceeEEEee
Q 004058 260 DAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILS----------------ANTMAPISVES 323 (776)
Q Consensus 260 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls----------------~~~~~~i~i~~ 323 (776)
...+||++||+.|.+++..+. +....... ...+|++|+.++ ......+.++
T Consensus 177 ~~~~GG~~lt~~l~~~l~~~~-----~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp- 243 (375)
T 2fxu_A 177 RLDLAGRDLTDYLMKILTERG-----YSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP- 243 (375)
T ss_dssp EESCCHHHHHHHHHHHHHHHT-----CCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT-
T ss_pred EeccCHHHHHHHHHHHHHhcC-----CCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC-
Confidence 458999999999999998651 21111001 233445555442 2222333332
Q ss_pred cccCcceEEEeeHHHHH---HHHHHH-----HHHHHHHHHHHHHHCC--CCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 324 LYVDIDFRSSITRQKFE---ELCEDL-----WERSLVPLREVLNYSG--LKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 324 l~~~~d~~~~itr~efe---~l~~~~-----~~~i~~~i~~~l~~a~--~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
++. .+.|+++.|+ .+++|. ...+.++|.++|..+. +....++.|+|+||+|++|.++++|++.++.
T Consensus 244 --dg~--~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~ 319 (375)
T 2fxu_A 244 --DGQ--VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITA 319 (375)
T ss_dssp --TSC--EEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHH
T ss_pred --CCC--EEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHH
Confidence 332 4688888883 344442 2457788888888663 2234457899999999999999999987752
Q ss_pred -------CccCCCCCcchhHHhHHHHHHH
Q 004058 394 -------TELDRHLDADEAIVLGASLLAA 415 (776)
Q Consensus 394 -------~~i~~~~n~deava~GAa~~aa 415 (776)
-++..+.+|+.++++||+++|.
T Consensus 320 ~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 320 LAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred hCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 1344567899999999999987
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.91 E-value=5e-23 Score=227.67 Aligned_cols=200 Identities=12% Similarity=0.035 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEE
Q 004058 175 AERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQV 254 (776)
Q Consensus 175 ~qR~~l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v 254 (776)
...+.+.+|++.|||++..++.||.|||++|.... ..+..+++||+||||||+++++ .+.+..
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~---~~~~gv~vvDiGggttdisi~~--------------~g~~~~ 230 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP---EKDRGVVVVNLGYNFTGLIAYK--------------NGVPIK 230 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH---HHHHCEEEEEECSSSEEEEEEE--------------TTEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc---cccCCEEEEEECCCcEEEEEEE--------------CCEEEE
Confidence 45678899999999999999999999999986543 2346799999999999999994 344332
Q ss_pred EEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCC-----CceeEEEeecccCcc
Q 004058 255 KDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSAN-----TMAPISVESLYVDID 329 (776)
Q Consensus 255 ~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~-----~~~~i~i~~l~~~~d 329 (776)
..+..+||++||+.|+..+. . ...+||++|+.++.. .+..+.++++.+ .
T Consensus 231 ---~~~i~~GG~~it~dIa~~l~----------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~ 284 (419)
T 4a2a_A 231 ---ISYVPVGMKHVIKDVSAVLD----------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG--N 284 (419)
T ss_dssp ---EEEESCCHHHHHHHHHHHHT----------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--C
T ss_pred ---EEecccHHHHHHHHHHHHHC----------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecCC--c
Confidence 23458999999999986542 1 157899999998642 345677776543 3
Q ss_pred eEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCCccEEEEecCccCcHHHHHHHHHHhCCC-ccCC----
Q 004058 330 FRSSITRQKFEELCEDLWERSLVPLREVLNYSGL------KMDEIYAVELIGGGTRVPKLQAKLQEYLGRT-ELDR---- 398 (776)
Q Consensus 330 ~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~------~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~-~i~~---- 398 (776)
....++|++|.++++|.++++...|++.|+.++. ....++.|+|+||+|++|.+++.+++.|+.. .+..
T Consensus 285 ~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~ 364 (419)
T 4a2a_A 285 TIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANS 364 (419)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGS
T ss_pred cceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCC
Confidence 5679999999999999999999999999999987 3456899999999999999999999999864 2222
Q ss_pred -C----------CCcchhHHhHHHHHHHHh
Q 004058 399 -H----------LDADEAIVLGASLLAANL 417 (776)
Q Consensus 399 -~----------~n~deava~GAa~~aa~l 417 (776)
+ -+|..+++.|.+++++..
T Consensus 365 ~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 365 DRPSIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp SSCCCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred CchhccCcccccCCchHHHHHHHHHHHhhc
Confidence 1 478999999999887653
No 20
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.85 E-value=4.8e-21 Score=205.50 Aligned_cols=228 Identities=13% Similarity=0.108 Sum_probs=148.6
Q ss_pred ccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCC-CCHH--HH--HHHHHH------------HHHhCCceeeecc
Q 004058 134 NNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPY-FGQA--ER--KGLMQA------------AELAGMNVLSLVN 196 (776)
Q Consensus 134 ~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~-f~~~--qR--~~l~~A------------a~~AGl~~~~li~ 196 (776)
..+++..+++.+ +.|+. +.. .+.++ .+|+++|.. |... || +++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 457787777654 44443 221 22233 599999987 6531 22 222221 2334556788999
Q ss_pred hhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCCCchHHHHHHHHHHH
Q 004058 197 EHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYF 276 (776)
Q Consensus 197 Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l 276 (776)
||.||+++|.... .++..++|+|+||||||+++++ .+.+.+..+.++..+||.+||+.|.+++
T Consensus 148 e~~aa~~~~~~~~---~~~~~~~vvDiGggttd~~v~~--------------~g~~~v~~~~~~~~lGg~~~~~~I~~~l 210 (320)
T 2zgy_A 148 ESIPAGYEVLQEL---DELDSLLIIDLGGTTLDISQVM--------------GKLSGISKIYGDSSLGVSLVTSAVKDAL 210 (320)
T ss_dssp SSHHHHHHHHHHS---CTTCEEEEEEECSSCEEEEEEE--------------GGGCCEEEEEEECSCCTHHHHHHHHHHT
T ss_pred CcHHHHHhhhccc---cCCCCEEEEEcCCCeEEEEEEe--------------CCeeEEeeecCCccccHHHHHHHHHHHH
Confidence 9999999886432 2357899999999999999994 3444566667788999999999999888
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHH-hhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHH
Q 004058 277 ADEFNKQVGNGVDVRKSPKAMAKLKKQVKRT-KEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLR 355 (776)
Q Consensus 277 ~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~-K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~ 355 (776)
.++ +.++. ...+|++ |..- .. .+....+...-.++++.+++++.++++.+.|.
T Consensus 211 ~~~-------~~~i~---------~~~ae~~lk~~~---~~-------~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~ 264 (320)
T 2zgy_A 211 SLA-------RTKGS---------SYLADDIIIHRK---DN-------NYLKQRINDENKISIVTEAMNEALRKLEQRVL 264 (320)
T ss_dssp TCC-------SBGGG---------HHHHHHHHHTTT---CH-------HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHc-------CCCCC---------HHHHHHHHHHhh---hh-------hcccceecCchhhHHHHHHHHHHHHHHHHHHH
Confidence 632 11221 1234444 3220 00 00000000011345666666777776666666
Q ss_pred HHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCC--ccCCCCCcchhHHhHHHHHH
Q 004058 356 EVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRHLDADEAIVLGASLLA 414 (776)
Q Consensus 356 ~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~--~i~~~~n~deava~GAa~~a 414 (776)
+.+++. .+++.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||+++|
T Consensus 265 ~~i~~~----~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 265 NTLNEF----SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHTTC----CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHhh----cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 666542 578999999999997 999999999863 46678899999999999875
No 21
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.84 E-value=2.3e-20 Score=175.66 Aligned_cols=147 Identities=22% Similarity=0.378 Sum_probs=121.9
Q ss_pred EEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeecccc----eEEEEEeecCCCCCCCCCCCceeEEEEc
Q 004058 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (776)
Q Consensus 429 ~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~~~i~ 504 (776)
+.|++|+++|+++.++.+. +|||+|+++|++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~Dv~p~slGi~~~gg~~~-------~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~V-yqGe~~~~~--dn~~LG~f~l~ 71 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMT-------PLIKRNTAIPTKKSQIFSTAVDNQPTVMIKV-YEGERAMSK--DNNLLGKFELT 71 (152)
T ss_dssp -CCBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGG--GSEEEEEEEEC
T ss_pred ccceeccEEEEEEcCCEEE-------EEEECcCccCEEEEEEEEeCCCCcceeeeeE-EEcCccccc--cCcEEEEEEEe
Confidence 5799999999999987653 8999999999999999988644 89999 999998876 68999999999
Q ss_pred CCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccc
Q 004058 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (776)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (776)
|+++++ +| .| +|+|+|.+|.||+|+|+..+.. +++
T Consensus 72 gipp~p-----~G--~~-~I~Vtf~iD~nGiL~V~a~d~~-------------------------------------tg~ 106 (152)
T 3h0x_A 72 GIPPAP-----RG--VP-QIEVTFALDANGILKVSATDKG-------------------------------------TGK 106 (152)
T ss_dssp CCCCCC-----TT--CS-CEEEEEEECTTSEEEEEEEETT-------------------------------------TCC
T ss_pred CCCCCC-----CC--Cc-eEEEEEEEcCCCEEEEEEEEcC-------------------------------------CCc
Confidence 999886 34 46 8999999999999987754310 000
Q ss_pred ccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhhH
Q 004058 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (776)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~ 664 (776)
+..++++.. ...||++++++|.+++++|+.
T Consensus 107 ----------------------------------------------~~~i~I~~~----~~~ls~~ei~~~~~~a~~~~~ 136 (152)
T 3h0x_A 107 ----------------------------------------------SESITITND----KGRLTQEEIDRMVEEAEKFAS 136 (152)
T ss_dssp ----------------------------------------------EEEEEEECC----TTCCCHHHHHHHHHHHHHTHH
T ss_pred ----------------------------------------------EeEEEEecC----CCCCCHHHHHHHHHHHHHHHH
Confidence 014666531 346999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 004058 665 KDADRRRTAELKNNLE 680 (776)
Q Consensus 665 ~D~~~~~~~~akN~LE 680 (776)
+|++.+++.++||.||
T Consensus 137 ~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 137 EDASIKAKVESRNKLE 152 (152)
T ss_dssp HHHHHHHHHHCSCCCC
T ss_pred hhHHHHHHHHHHhhcC
Confidence 9999999999999997
No 22
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.82 E-value=2.6e-20 Score=174.90 Aligned_cols=147 Identities=19% Similarity=0.391 Sum_probs=118.2
Q ss_pred EEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeecccc----eEEEEEeecCCCCCCCCCCCceeEEEEc
Q 004058 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (776)
Q Consensus 429 ~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~~~i~ 504 (776)
+.|++|+++|+++.++.+. +|||+|+++|++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~Dv~p~slGie~~gg~~~-------~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--dn~~LG~f~l~ 71 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMT-------NLIDRNTRIPTKACKTFTTYADNQPGVSIQV-YEGERAMTR--DNHRLGTFELS 71 (152)
T ss_dssp --CBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEEE
T ss_pred ceeeecceEEEEEcCCEEE-------EEEECcCccCEEEEEEEEECCCCceEEEEEE-EEcCccccc--cCceeEEEEEe
Confidence 5799999999999987653 8999999999999999988654 78999 999998876 69999999999
Q ss_pred CCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccc
Q 004058 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (776)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (776)
|+++++ +| .| .|+|+|.+|.||+|+|+..+.. +++
T Consensus 72 gipp~p-----~G--~~-~IeVtf~iD~nGiL~Vsa~d~~-------------------------------------tg~ 106 (152)
T 3dob_A 72 GIPPAP-----RG--VP-QIEVTFNIDANGILNVSAEDKS-------------------------------------TGK 106 (152)
T ss_dssp CCCCCC-----TT--CC-CEEEEEEECTTCCEEEEEEETT-------------------------------------TCC
T ss_pred CCCCCC-----CC--Cc-eEEEEEEeCCCCeEEEEEEEcC-------------------------------------CCC
Confidence 999886 34 46 8999999999999987654310 000
Q ss_pred ccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhhH
Q 004058 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (776)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~ 664 (776)
+..|+++. ....||++++++|.+++++|++
T Consensus 107 ----------------------------------------------~~~i~I~~----~~~~Ls~~ei~~~~~~a~~~~~ 136 (152)
T 3dob_A 107 ----------------------------------------------SNRITIQN----EKGRLTQSDIDRMVHEAKQFEK 136 (152)
T ss_dssp ----------------------------------------------EEEEEECC----C----CHHHHHHHHHHHHHTHH
T ss_pred ----------------------------------------------EEEEEEEc----CCCCCCHHHHHHHHHHHHHHHH
Confidence 01455542 1345999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 004058 665 KDADRRRTAELKNNLE 680 (776)
Q Consensus 665 ~D~~~~~~~~akN~LE 680 (776)
+|++.+++.++||.||
T Consensus 137 ~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 137 EDGEQRERVQARNQLE 152 (152)
T ss_dssp HHHHHHHTCCCCSEEC
T ss_pred hhHHHHHHHHHHhhcC
Confidence 9999999999999987
No 23
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.81 E-value=2.6e-20 Score=174.75 Aligned_cols=146 Identities=19% Similarity=0.358 Sum_probs=120.6
Q ss_pred EEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeecccc----eEEEEEeecCCCCCCCCCCCceeEEEEc
Q 004058 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (776)
Q Consensus 429 ~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~~~i~ 504 (776)
+.|++|+++|+++.++.+. +|||+|+++|++++.+|++..| +.|.+ |+|++.++. +|..||+|.|.
T Consensus 2 ~~DV~p~slGie~~gg~~~-------~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~V-yqGe~~~~~--dn~~LG~f~l~ 71 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMT-------KLITRNTTIPTKKSQVFSTAADGQTQVQIKV-FQGEREMAT--SNKLLGQFSLV 71 (151)
T ss_dssp --CBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGG--GSEEEEEEEEE
T ss_pred cceeeeeEEEEEEcCCEEE-------EEEECcCccCEEEEEEEEECCCCcceEEEEE-EEcCCcccc--cCcEEEEEEEe
Confidence 5799999999999987653 8999999999999999988654 89999 999998876 68999999999
Q ss_pred CCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccc
Q 004058 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (776)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (776)
|+++++ +| .| .|+|+|.+|.||+|+|+..+.. +++
T Consensus 72 gipp~p-----~G--~~-~IeVtf~iD~nGiL~Vsa~d~~-------------------------------------tg~ 106 (151)
T 3dqg_A 72 GIPPAP-----RG--VP-QVEVTFDIDANGIVNVSARDRG-------------------------------------TGK 106 (151)
T ss_dssp CCCCCC-----TT--CS-CEEEEEEECTTSEEEEEEEETT-------------------------------------TCC
T ss_pred CCCCCC-----CC--Cc-EEEEEEEeccCcEEEEEEEEcc-------------------------------------CCC
Confidence 999886 34 46 8999999999999987744310 000
Q ss_pred ccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhhH
Q 004058 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (776)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~ 664 (776)
+..++++. ...||++++++|.+++++|++
T Consensus 107 ----------------------------------------------~~~i~I~~-----~~~Ls~~ei~~~~~~a~~~~~ 135 (151)
T 3dqg_A 107 ----------------------------------------------EQQIVIQS-----SGGLSKDQIENMIKEAEKNAA 135 (151)
T ss_dssp ----------------------------------------------EEEEEEEC-----SSSSCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------EeEEEEec-----CCCCCHHHHHHHHHHHHHHHH
Confidence 01456652 246999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 004058 665 KDADRRRTAELKNNLE 680 (776)
Q Consensus 665 ~D~~~~~~~~akN~LE 680 (776)
+|++.+++.++||.||
T Consensus 136 ~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 136 EDAKRKELVEVINQAE 151 (151)
T ss_dssp HHTTCCCEEECBCCCC
T ss_pred HhHHHHHHHHHHhhcC
Confidence 9999999999999987
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.79 E-value=5.3e-19 Score=167.36 Aligned_cols=147 Identities=21% Similarity=0.337 Sum_probs=120.4
Q ss_pred EEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeecccc----eEEEEEeecCCCCCCCCCCCceeEEEEc
Q 004058 429 MVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAKD----FEVSLAYESEDLLPPGATSPVFAKYAVS 504 (776)
Q Consensus 429 ~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~~----~~i~i~y~~~~~~~~~~~~~~i~~~~i~ 504 (776)
+.|++|++||+++.++.+. +|||+|+++|++++..|++..+ +.|.+ |+|++.++. +|..||+|.+.
T Consensus 2 v~Dv~p~slGi~~~~g~~~-------~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v-~qGe~~~~~--~n~~lg~~~l~ 71 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMT-------KLIGRNTVIPTKKSQVFSTAADSQSAVSIVI-YEGERPMVM--DNHKLGNFDVT 71 (152)
T ss_dssp -CCBCSSCEEEEETTTEEE-------EEECTTCBSSEEEEEEEEESSTTCCCEEEEE-EESSCSBGG--GSEEEEEEEEC
T ss_pred ceEeecccEEEEEeCCEEE-------EEEeCCCcccEeEEEEEEeCCCCCcEEEEEE-EEeCCccCc--cCCEeEEEEEE
Confidence 5799999999999887653 8999999999999999988654 99999 999988776 58999999999
Q ss_pred CCccchhhhccCCCCCCceEEEEEEEccCCceeeeeeeEEEEEEEEeeccccccccccccCCCCCCchhhhhhccccccc
Q 004058 505 GLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLIVENVASSSPNISAETAAQNMTVEAN 584 (776)
Q Consensus 505 ~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (776)
|+++++ +| .| +|+|+|++|.||+|+|+..+.. ++
T Consensus 72 gipp~p-----~G--~~-~I~V~f~id~nGiL~V~a~d~~-------------------------------------tg- 105 (152)
T 2op6_A 72 GIPPAP-----RG--VP-QIEVTFEIDVNGILHVSAEDKG-------------------------------------TG- 105 (152)
T ss_dssp CCCCCC-----TT--CS-CEEEEEEECTTSCEEEEEEETT-------------------------------------TC-
T ss_pred CCCCCC-----CC--Cc-eEEEEEEECCCcEEEEEEEEec-------------------------------------CC-
Confidence 999875 34 56 8999999999999987644210 00
Q ss_pred ccccccCCCCCCCCchhhhhhcCCCCCCCCCccchhhhcccccceeeeeeEEEeeccCCCCCCCHHHHHHHHHHHHHhhH
Q 004058 585 ENLQSESGTSSASNSTAEELSASNSSAEEPSKTELLTEKRLKKRTFRVPLKIVEKTVGPGASLSKEALVDAEAKLEELDK 664 (776)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~ 664 (776)
+ ...++++. ....||+++++++.+++++|+.
T Consensus 106 -----------------------------------------~----~~~i~i~~----~~~~ls~eei~~~~~~~~~~~~ 136 (152)
T 2op6_A 106 -----------------------------------------N----KNKLTITN----DHNRLSPEDIERMINDADKFAA 136 (152)
T ss_dssp -----------------------------------------C----EEEEEECS----SSSCCCHHHHHHHHHHHHHTHH
T ss_pred -----------------------------------------c----EEEEEeec----cccCCCHHHHHHHHHHHHHhHh
Confidence 0 01355542 1346999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 004058 665 KDADRRRTAELKNNLE 680 (776)
Q Consensus 665 ~D~~~~~~~~akN~LE 680 (776)
+|+..+++.++||.||
T Consensus 137 ~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 137 DDQAQKEKVESRNELE 152 (152)
T ss_dssp HHHHHHHHSCCCSEEC
T ss_pred ccHHHHHHHHHHhhcC
Confidence 9999999999999987
No 25
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.74 E-value=5.4e-19 Score=194.85 Aligned_cols=215 Identities=16% Similarity=0.175 Sum_probs=88.7
Q ss_pred CcEEEEcCCCCCHHHHHHHHHHH-HHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccc
Q 004058 162 KDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNA 240 (776)
Q Consensus 162 ~~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~ 240 (776)
..++||+|+.++..+|+++.+.+ +.+|++.+.++++|.|||++++. .+.+|+|+|+|+|+++.+.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~--------~~~lVVDiG~g~T~v~pv~------ 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL--------LTGVVVDSGDGVTHICPVY------ 170 (394)
T ss_dssp ---------------------------------------------------------CCEEEECSSCEEEECEE------
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC--------ceEEEEEcCCCceEeeeeE------
Confidence 35999999999999999998864 77899999999999999988764 3569999999999998873
Q ss_pred cccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCC-----
Q 004058 241 KVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANT----- 315 (776)
Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~----- 315 (776)
.|.. +........+||+++|+.|.+++..+- +....... ...+|.+|+.++.-.
T Consensus 171 --------~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~-----~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~ 229 (394)
T 1k8k_B 171 --------EGFS-LPHLTRRLDIAGRDITRYLIKLLLLRG-----YAFNHSAD-------FETVRMIKEKLCYVGYNIEQ 229 (394)
T ss_dssp --------TTEE-CSTTCEEESCCHHHHHHHHHHHHHHTT-----CCCCTTTT-------HHHHHHHHHHHCCCCSSHHH
T ss_pred --------CCEE-cccceEEeeccHHHHHHHHHHHHHhcC-----CCCCcHHH-------HHHHHHHHHhheeEecCHHH
Confidence 2221 111112337999999999999987541 22211112 234555565543221
Q ss_pred -----------ceeEEEeecccCcceEEEeeHHHHH---HHHHHH-----HHHHHHHHHHHHHHCCCC--CCCccEEEEe
Q 004058 316 -----------MAPISVESLYVDIDFRSSITRQKFE---ELCEDL-----WERSLVPLREVLNYSGLK--MDEIYAVELI 374 (776)
Q Consensus 316 -----------~~~i~i~~l~~~~d~~~~itr~efe---~l~~~~-----~~~i~~~i~~~l~~a~~~--~~~i~~V~Lv 374 (776)
...+. +.++. .+.|+++.|+ .+++|. ...+.+.|.++|..+... ..-++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~---lpdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLt 304 (394)
T 1k8k_B 230 EQKLALETTVLVESYT---LPDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLS 304 (394)
T ss_dssp HHHHHHHCSTTCEEEE---CTTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEE
T ss_pred HHHhhccCCcCceEEE---CCCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEe
Confidence 11222 22333 4577888773 233331 234777888888876432 3345779999
Q ss_pred cCccCcHHHHHHHHHHhCC---------------C---ccCCCCCcchhHHhHHHHHHHH
Q 004058 375 GGGTRVPKLQAKLQEYLGR---------------T---ELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 375 GG~sriP~v~~~l~~~f~~---------------~---~i~~~~n~deava~GAa~~aa~ 416 (776)
||+|++|.+.+.|++.++. . ++..+.++..++.+||+++|..
T Consensus 305 GG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 305 GGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp SGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred CcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 9999999999998876642 1 2233557788999999998873
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.72 E-value=3.4e-17 Score=171.71 Aligned_cols=183 Identities=12% Similarity=0.061 Sum_probs=121.8
Q ss_pred HhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCCCch
Q 004058 186 LAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGG 265 (776)
Q Consensus 186 ~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lGG 265 (776)
.++...+..|+|++|+++++.... +....|+|+|||+++++++. ..+.+++...+++...||
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-----~~~~~vl~lgG~~~~~~~~~-------------~~g~~~~~~~~~~~~~g~ 129 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-----PETRTIIDIGGQDAKVLKLD-------------NNGRLLNFLMNDKCAAGT 129 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-----TTCCEEEEECSSCEEEEEEC-------------TTSCEEEEEEECSCSTTS
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-----CCCCeEEEEcCCCceEEEEE-------------ecCceEEEEeCCCcCcch
Confidence 366777899999999998876543 23457899999999999883 256788888889999999
Q ss_pred HHHHHHHHHHHHHHHhhhc------CCCCCCCCCHHHHHHHHHHHHHHhhhccCCCceeEEEeecccCcceEEEeeHHHH
Q 004058 266 QNMELRLVEYFADEFNKQV------GNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYVDIDFRSSITRQKF 339 (776)
Q Consensus 266 ~~~D~~l~~~l~~~~~~~~------~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~ef 339 (776)
.+|+..+++++.-.+.... ....++........+ . ..+..+ .. ....
T Consensus 130 G~f~d~~a~~l~~~~~~~~~~~~~a~~~~~i~~~~~~f~~--s---~~~~~~-------------~~---------~~~~ 182 (276)
T 4ehu_A 130 GRFLDVMAKIIEVDVSELGSISMNSQNEVSISSTCTVFAE--S---EVISHL-------------SE---------NAKI 182 (276)
T ss_dssp HHHHHHHHHHHTCCGGGHHHHHTTCSSCCCCCCCSHHHHH--H---HHHHHH-------------HT---------TCCH
T ss_pred hhHHHHHHHHhccChhhhHHHHhcCCCCCCcCCccchhhh--h---HHHHhh-------------hc---------cccH
Confidence 9999999988764443210 000001000000000 0 000000 00 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhc
Q 004058 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 340 e~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls 418 (776)
++++..+.+.+.+.+.....+. ..++.|+|+||.+++|.|++.|++.||. ++..+.||++++|+|||++|....
T Consensus 183 ~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~-~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 183 EDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINT-EIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTS-CEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCC-CeeeCCCcchHHHHHHHHHHHHHH
Confidence 4555555555555444444332 3567899999999999999999999986 677889999999999999997644
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.69 E-value=6.9e-17 Score=174.67 Aligned_cols=207 Identities=13% Similarity=0.180 Sum_probs=138.5
Q ss_pred cEEEEcCCCCCHHHH-HHHHHHHHHhCC------------ceeeecchhHHHHHHhccccCCCC---CCcEEEEEEecCc
Q 004058 163 DFVISVPPYFGQAER-KGLMQAAELAGM------------NVLSLVNEHSGAALQYGIDKDFSN---ESRHVVFYDMGAT 226 (776)
Q Consensus 163 ~~VitVPa~f~~~qR-~~l~~Aa~~AGl------------~~~~li~Ep~AAAl~y~~~~~~~~---~~~~vlV~D~Ggg 226 (776)
.+++++|..+...+| +++++++...+- ..+.++.||.||+++|........ .+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 689999999988887 589998875432 357899999999999876431101 3578999999999
Q ss_pred cceeeEEEEeeccccccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHH
Q 004058 227 TTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKR 306 (776)
Q Consensus 227 T~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~ 306 (776)
|||++++. .+.+ +....+...+||..+++.|.+++.+++. +..+. . ...++
T Consensus 195 Ttd~~v~~--------------~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~-----g~~l~--~-------~~i~~ 245 (355)
T 3js6_A 195 TTIIDTYQ--------------NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE-----GASIT--P-------RMIEK 245 (355)
T ss_dssp CEEEEEEE--------------TTEE-CGGGCEEESCCHHHHHHHHHHHTC-------------C--H-------HHHHS
T ss_pred cEEEEEEc--------------CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC-----CCcCC--H-------HHHhc
Confidence 99999983 2211 1111223379999999999999887641 22221 1 11111
Q ss_pred HhhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHH--HH
Q 004058 307 TKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPK--LQ 384 (776)
Q Consensus 307 ~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~--v~ 384 (776)
.+. +.... .+..-.+.+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++. |+
T Consensus 246 g~~---------~~~~~--~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~ 309 (355)
T 3js6_A 246 GLE---------YKQCK--LNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLS 309 (355)
T ss_dssp CCC------------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHH
T ss_pred CCc---------ccccc--ccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHH
Confidence 111 00000 000001122 4457777888888888888888754 467899999999999998 88
Q ss_pred HHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhcC
Q 004058 385 AKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (776)
Q Consensus 385 ~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls~ 419 (776)
+.|++.|+.. .||..|+|+|+..++..+..
T Consensus 310 ~~i~~~~~~~-----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 310 HYYSDVFEKA-----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp HHSSSCEECC-----SSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-----CCcHHHHHHHHHHHHHHHHh
Confidence 9999888542 79999999999999887654
No 28
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.49 E-value=8.5e-15 Score=156.98 Aligned_cols=204 Identities=14% Similarity=0.172 Sum_probs=138.7
Q ss_pred CcEEEEcCCCCCH--HHHHHHHHHHHHh--------C------CceeeecchhHHHHHHhccccCCCCCCcEEEEEEecC
Q 004058 162 KDFVISVPPYFGQ--AERKGLMQAAELA--------G------MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGA 225 (776)
Q Consensus 162 ~~~VitVPa~f~~--~qR~~l~~Aa~~A--------G------l~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~Gg 225 (776)
..+++++|..+.. .+|+.+++....- | +..+.++.||.+|.+.+. .. .+...++|+|+||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~--~~~~~v~vvDiGg 181 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--EN--FKNKNVAVIDFGG 181 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CC--CTTCEEEEEEECS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hh--hccCCEEEEEeCC
Confidence 3689999998774 3677787765521 1 123678999998887652 21 2357899999999
Q ss_pred ccceeeEEEEeeccccccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHH-HHhhhcCCCCCCCCCHHHHHHHHHHH
Q 004058 226 TTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFAD-EFNKQVGNGVDVRKSPKAMAKLKKQV 304 (776)
Q Consensus 226 gT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~-~~~~~~~~~~d~~~~~~~~~kL~~~~ 304 (776)
||||++++. .+.+ +....+...+||.++++.|.+++.+ + ++..+.. ..+
T Consensus 182 gTtd~~v~~--------------~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~------~g~~i~~---------~~~ 231 (329)
T 4apw_A 182 LNMGFSLYR--------------NCVV-NPSERFIEEHGVKDLIIRVGDALTDLN------NGNLITN---------EQA 231 (329)
T ss_dssp SCEEEEEEE--------------TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCS------SCSCTTS---------BTT
T ss_pred CcEEEEEEE--------------CCEE-eeccccchhhHHHHHHHHHHHHHHhhc------cCCCCCH---------HHH
Confidence 999999994 2322 2112234479999999999987765 3 3333322 123
Q ss_pred HHHhhhccCCCceeEEEeecccCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHH
Q 004058 305 KRTKEILSANTMAPISVESLYVDIDFRSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQ 384 (776)
Q Consensus 305 e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~ 384 (776)
+++|+. . .. ..+.+. ..+..+++++.++++++.+.+.+++. +.+++.++.|+|+||++.+ +.
T Consensus 232 e~i~~~--g--~~-------~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~ 293 (329)
T 4apw_A 232 ESALNN--G--YM-------KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LK 293 (329)
T ss_dssp TTCSSS--C--SS-------CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HH
T ss_pred HHHHhc--C--Cc-------ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HH
Confidence 334432 1 11 001111 14567888888888888888777766 3455668999999999998 56
Q ss_pred HHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhc
Q 004058 385 AKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 385 ~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls 418 (776)
+.|++.|+. ++....||..|+|+|+..++....
T Consensus 294 ~~l~~~~~~-~v~v~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 294 EQISKTYPN-NSIITNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp HHHHHHSTT-CEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC-CCEecCCChhhHHHHHHHHHhhhh
Confidence 999999984 455678999999999998876543
No 29
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.48 E-value=6.7e-14 Score=128.75 Aligned_cols=100 Identities=19% Similarity=0.361 Sum_probs=82.1
Q ss_pred CcceEEeccceeeeeeecCCccccCCCcceeeeeCCCCCCcceEEeeeccc----ceEEEEEeecCCCCCCCCCCCceeE
Q 004058 425 RKLGMVDGSSYGFVVELDGPELQKDESTRQLLAPRMKKLPSKMFRSIIHAK----DFEVSLAYESEDLLPPGATSPVFAK 500 (776)
Q Consensus 425 ~~~~~~d~~~~~igi~~~~~~~~~~~~~~~~l~~~~~~~P~~~~~~f~~~~----~~~i~i~y~~~~~~~~~~~~~~i~~ 500 (776)
+++.+.|++|++||+++.++.+. +|||+|+++|++++.+|++.. .+.|.+ |+|++.++. +|..||+
T Consensus 15 ~d~~l~Dv~p~slGIe~~~g~~~-------~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~--~n~~Lg~ 84 (135)
T 1q5l_A 15 RGSHMVDVTPLSLGIETMGGVMT-------TLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAA--DNKSLGQ 84 (135)
T ss_dssp ------CCCSSCCCEEETTTEEC-------CSSCSSSCSSBCCEEEECCCSSSCSSCEEEE-EECCSSSCS--SSEEEEE
T ss_pred CcEEEEEeecCcEEEEEECCEEE-------EEEcCCCeEeEeEeEEEEeccCCceEEEEEE-EEeCCcccc--cCcEEEE
Confidence 67899999999999999887653 899999999999999998754 499999 999988876 6899999
Q ss_pred EEEcCCccchhhhccCCCCCCceEEEEEEEccCCceeeeeee
Q 004058 501 YAVSGLAEASEKYSSRNLSSPIKANLHFSLSRSGVLSLDRAD 542 (776)
Q Consensus 501 ~~i~~i~~~~~~~~~~~~~~~~~i~v~f~ld~~g~l~v~~~~ 542 (776)
|.+.|+++++ +| .+ +|+|+|++|.||+|.|+..+
T Consensus 85 f~l~gipp~p-----~G--~~-~IeVtf~iD~nGiL~V~a~d 118 (135)
T 1q5l_A 85 FNLDGINPAP-----RG--MP-QIEVTFDIDADGILHVSAKD 118 (135)
T ss_dssp EECCCCCSCC-----SS--SC-CEEEEEEECTTSEEEEEEEE
T ss_pred EEEeCCCCCC-----Cc--ee-EEEEEEEECCCCEEEEEEEE
Confidence 9999999875 34 46 89999999999999887543
No 30
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.35 E-value=3.4e-12 Score=114.02 Aligned_cols=83 Identities=19% Similarity=0.347 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHHHH
Q 004058 668 DRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFF 747 (776)
Q Consensus 668 ~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~k~~~L~~~~~pi~~ 747 (776)
++|++.++||.||+|||++|..|.++. |..++++++++.|.+.|.++.+||+.+ ++++.++|++|+++|++++.||..
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~-~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~ 80 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEG-LKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIIS 80 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGG-GBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999998754 889999999999999999999999986 688999999999999999999999
Q ss_pred HHHhh
Q 004058 748 RFKEL 752 (776)
Q Consensus 748 R~~e~ 752 (776)
|+++.
T Consensus 81 k~y~~ 85 (113)
T 3lof_A 81 GLYQG 85 (113)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 99864
No 31
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.34 E-value=4.8e-13 Score=147.87 Aligned_cols=243 Identities=16% Similarity=0.094 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHhhcCCC--CCcEEEEcCCCCCHHHHHHHHHHH-HHhCCceeeecchhHHHHHHhccccCCCCCCcE
Q 004058 141 LLAMVLSYAVNLVDTHAKLA--VKDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRH 217 (776)
Q Consensus 141 l~a~~L~~l~~~a~~~~~~~--~~~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~ 217 (776)
.+..+++|+.. ..++.. -..+++|.|+..+...|+.+.+.+ +..|++.+.++.+|.+|+++.+..........+
T Consensus 104 ~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~t 180 (427)
T 3dwl_A 104 HMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLT 180 (427)
T ss_dssp HHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCC
T ss_pred HHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCce
Confidence 44555555542 223322 246999999999999999999987 678999999999999999887753211111356
Q ss_pred EEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHH
Q 004058 218 VVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAM 297 (776)
Q Consensus 218 vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~ 297 (776)
-||+|+|+|+|+++.+.- |...... .....+||+++|+.|.+++..+.. . ..
T Consensus 181 glVVDiG~g~T~v~PV~~--------G~~l~~~-------~~rl~~gG~~lt~~L~~lL~~~~~------~--~~----- 232 (427)
T 3dwl_A 181 GTVVDSGDGVTHIIPVAE--------GYVIGSS-------IKTMPLAGRDVTYFVQSLLRDRNE------P--DS----- 232 (427)
T ss_dssp EEEEEESSSCEEEEEEET--------TEECGGG-------CEEESCCHHHHHHHHHHTTC--------------------
T ss_pred EEEEECCCCceEEEEEEC--------CEEehhh-------heeccccHHHHHHHHHHHHHHcCC------C--ch-----
Confidence 899999999999999831 1111111 111279999999999888765421 1 00
Q ss_pred HHHHHHHHHHhhhccCCCce-----------eEEEe--ec--ccCcceEEEeeHHHHH---HHHHHH------HHHHHHH
Q 004058 298 AKLKKQVKRTKEILSANTMA-----------PISVE--SL--YVDIDFRSSITRQKFE---ELCEDL------WERSLVP 353 (776)
Q Consensus 298 ~kL~~~~e~~K~~Ls~~~~~-----------~i~i~--~l--~~~~d~~~~itr~efe---~l~~~~------~~~i~~~ 353 (776)
=...++.+|+.++.-... ...+. .+ .++..+.+.|..+.|. -+++|- ...|.++
T Consensus 233 --~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~ 310 (427)
T 3dwl_A 233 --SLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPEL 310 (427)
T ss_dssp ---CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHH
T ss_pred --hHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHH
Confidence 023455566655422100 00011 11 2333345677777763 344441 2357778
Q ss_pred HHHHHHHCCCC--CCCccEEEEecCccCcHHHHHHHHHHh----C--------------C---CccCCCCCcchhHHhHH
Q 004058 354 LREVLNYSGLK--MDEIYAVELIGGGTRVPKLQAKLQEYL----G--------------R---TELDRHLDADEAIVLGA 410 (776)
Q Consensus 354 i~~~l~~a~~~--~~~i~~V~LvGG~sriP~v~~~l~~~f----~--------------~---~~i~~~~n~deava~GA 410 (776)
|.+.|.++... ..-...|+|+||+|.+|.+.++|++.+ + . -++..+.++..++=.|+
T Consensus 311 i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGG 390 (427)
T 3dwl_A 311 VDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGG 390 (427)
T ss_dssp HHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHH
T ss_pred HHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCc
Confidence 88888765421 112356999999999999888887644 1 1 12334456778999999
Q ss_pred HHHHHH
Q 004058 411 SLLAAN 416 (776)
Q Consensus 411 a~~aa~ 416 (776)
+++|..
T Consensus 391 Silasl 396 (427)
T 3dwl_A 391 SLLAQT 396 (427)
T ss_dssp HHHHHS
T ss_pred eeeccc
Confidence 999863
No 32
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.30 E-value=4.8e-11 Score=133.17 Aligned_cols=176 Identities=14% Similarity=0.150 Sum_probs=115.1
Q ss_pred cEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeC----CceEEcHhHHHhHhhCcchHHHHHHHhhCC
Q 004058 25 AVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHE----STRLLGEEASGIIARYPHRVYSQLRDMIGK 100 (776)
Q Consensus 25 ~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~----~~~~~G~~A~~~~~~~p~~~~~~~K~llG~ 100 (776)
..|+||+||.++++.+. ..+ .|.- .+||+|+... ...+||.+|....
T Consensus 24 ~~iVID~GS~~~kaG~a--g~~-~P~~---------v~PSvVg~~~~~~~~~~~vG~e~~~~~----------------- 74 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYS--GSD-FPQS---------ILPSVYGKYTADEGNKKIFSEQSIGIP----------------- 74 (498)
T ss_dssp SCEEEECCSSEEEEEET--TCS-SCSE---------EEESEEEEESSCSSCCEECCTTGGGSC-----------------
T ss_pred CeEEEECCCcEEEEEEC--CCC-Ceee---------ecCceeEEeccCCCccEEEecHHHhcC-----------------
Confidence 57999999999999987 322 3332 3589998843 3467787532110
Q ss_pred CchhhHhhHhhcCCCceEeeCCCCceEEE--eCCCccccHHHHHHHHHHHHHHHHHhhcCC--CCC-cEEEEcCCCCCHH
Q 004058 101 PFKQVKHLIDSLYLPFNVVEDSRGAVSFK--IDENNNFSVEELLAMVLSYAVNLVDTHAKL--AVK-DFVISVPPYFGQA 175 (776)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~eel~a~~L~~l~~~a~~~~~~--~~~-~~VitVPa~f~~~ 175 (776)
++.+.+. +.+|.... -+.+..+++|+... .++. .-. .++||.|+.....
T Consensus 75 ----------------------r~~l~l~~Pi~~GvI~d-wd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~ 128 (498)
T 3qb0_A 75 ----------------------RKDYELKPIIENGLVID-WDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTE 128 (498)
T ss_dssp ----------------------CTTEEEEESEETTEESC-HHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHH
T ss_pred ----------------------cCceEEeccCcCCEEcc-HHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHH
Confidence 0011111 12332111 23445566665532 2222 123 5899999999999
Q ss_pred HHHHHHHHH-HHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEE
Q 004058 176 ERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQV 254 (776)
Q Consensus 176 qR~~l~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v 254 (776)
.|+.+.+.+ +..|++.+.++.+|.||+++++.. +-||+|+|+|+|+++.+. .|.. +
T Consensus 129 ~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~--------tglVVDiG~g~T~vvPI~--------------~G~~-l 185 (498)
T 3qb0_A 129 NRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP--------NCLVVDIGHDTCSVSPIV--------------DGMT-L 185 (498)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS--------SEEEEEECSSCEEEEEEE--------------TTEE-C
T ss_pred HHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC--------eEEEEEcCCCcEEEEEEe--------------CCEE-c
Confidence 999999974 778999999999999999887642 249999999999999983 1210 1
Q ss_pred EEeecCCCCchHHHHHHHHHHHHH
Q 004058 255 KDVRWDAELGGQNMELRLVEYFAD 278 (776)
Q Consensus 255 ~~~~~~~~lGG~~~D~~l~~~l~~ 278 (776)
........+||+++|+.|.++|..
T Consensus 186 ~~ai~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 186 SKSTRRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp GGGCEEESCSHHHHHHHHHHHTTT
T ss_pred cccceeccccHHHHHHHHHHHHHh
Confidence 000111279999999999998864
No 33
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.09 E-value=1.1e-10 Score=105.17 Aligned_cols=82 Identities=20% Similarity=0.408 Sum_probs=74.0
Q ss_pred HHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHHHH
Q 004058 668 DRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFF 747 (776)
Q Consensus 668 ~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~k~~~L~~~~~pi~~ 747 (776)
.+|++.++||.||+|||++|..|.++. +...++++++++|...|.++.+||+++ ++++.++|+.++++|++++.||..
T Consensus 12 ~~re~iEarN~aEsliy~~e~~L~e~~-~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~ 89 (120)
T 2p32_A 12 SGLVPRGSHMGLESYAFNLKQTIEDEK-LKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIIS 89 (120)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHTCTT-TGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999998644 778999999999999999999999865 578999999999999999999999
Q ss_pred HHHh
Q 004058 748 RFKE 751 (776)
Q Consensus 748 R~~e 751 (776)
|+++
T Consensus 90 k~y~ 93 (120)
T 2p32_A 90 KLYQ 93 (120)
T ss_dssp HHCC
T ss_pred HHHH
Confidence 9874
No 34
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.05 E-value=3e-10 Score=123.62 Aligned_cols=197 Identities=13% Similarity=0.137 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHh-CC--ceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCe
Q 004058 175 AERKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQ 251 (776)
Q Consensus 175 ~qR~~l~~Aa~~A-Gl--~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~ 251 (776)
.+-+.+.+|.+.+ |+ ++-. -||.||+++...+. +.+-.+.++||||||||++++. . .+.
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD---E~eLGvaiIDmGGGTTd~sVf~------------~-G~l 429 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP---GTTRPLAILDLGAGSTDASIIN------------P-KGD 429 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST---TCCSSEEEEEECSSEEEEEEEC------------T-TCC
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC---CCcCCeEEEEeCCCcceEEEEc------------C-CcE
Confidence 3467888999999 99 6666 99999999876654 4456799999999999999993 1 122
Q ss_pred EEEEEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccC----------CCceeEEE
Q 004058 252 FQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSA----------NTMAPISV 321 (776)
Q Consensus 252 ~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~----------~~~~~i~i 321 (776)
+.... -..||+.++..|..-|. -.| +..||++|. ... .....+.+
T Consensus 430 v~a~~----ip~gG~~VT~DIA~~Lg---------t~d-----------~~~AErIK~-YG~A~ve~lf~~~dede~Iev 484 (610)
T 2d0o_A 430 IIATH----LAGAGDMVTMIIARELG---------LED-----------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQF 484 (610)
T ss_dssp EEEEE----EECSHHHHHHHHHHHHT---------CCC-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEE
T ss_pred EEEEE----eccchHHHHHHHHHHhC---------CCC-----------HHHHHHhcc-cCceeecccccccCCCCeEEE
Confidence 22122 26899999988875542 111 467899998 421 12224445
Q ss_pred --eecc----cC-----cceEEEeeHHH--HHHHHHHHHHHHHHH--HHHHHHHCCC-----CCCCccEEEEecCccCcH
Q 004058 322 --ESLY----VD-----IDFRSSITRQK--FEELCEDLWERSLVP--LREVLNYSGL-----KMDEIYAVELIGGGTRVP 381 (776)
Q Consensus 322 --~~l~----~~-----~d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~a~~-----~~~~i~~V~LvGG~sriP 381 (776)
+.+. .. .+.-..| +.. +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.+|
T Consensus 485 ~~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~ 562 (610)
T 2d0o_A 485 FSTPLPPAVFARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDF 562 (610)
T ss_dssp CSSCCCGGGTTCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCS
T ss_pred ecCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcc
Confidence 3322 11 0112355 666 666 55555554443 3344555432 356789999999999999
Q ss_pred HHHHHHHHHhCC-C------ccCCCCCcchhHHhHHHHHHHH
Q 004058 382 KLQAKLQEYLGR-T------ELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 382 ~v~~~l~~~f~~-~------~i~~~~n~deava~GAa~~aa~ 416 (776)
.+.++..+.|+. . .....-+|..|+|.|.+++-+.
T Consensus 563 GI~ElA~~iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 563 EVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp SHHHHHHHHTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHhCcCCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 999999999987 2 1122458999999999987643
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.04 E-value=9.9e-09 Score=119.18 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=78.8
Q ss_pred HHHHHH-hhcCCCCC-----cEEEEcCCCCCHHHHHHHHHH-HHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEE
Q 004058 149 AVNLVD-THAKLAVK-----DFVISVPPYFGQAERKGLMQA-AELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFY 221 (776)
Q Consensus 149 l~~~a~-~~~~~~~~-----~~VitVPa~f~~~qR~~l~~A-a~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~ 221 (776)
+++++- ..++.... .+++|.|..++...|+.|.+. .+..|++.+.++.++.+|+++++. .+-+||
T Consensus 180 iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~--------~tglVV 251 (593)
T 4fo0_A 180 IWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL--------SSTCIV 251 (593)
T ss_dssp HHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC--------SEEEEE
T ss_pred HHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC--------CceEEE
Confidence 444332 34554433 399999999999999998876 455699999999999999988754 356999
Q ss_pred EecCccceeeEEEEeeccccccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHH
Q 004058 222 DMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADE 279 (776)
Q Consensus 222 D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 279 (776)
|+|++.|.++-|. .|........ . ..+||.++++.|.++|..+
T Consensus 252 DiG~~~T~v~PV~--------dG~~l~~~~~---r----l~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 252 DVGDQKTSVCCVE--------DGVSHRNTRL---C----LAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp EECSSCEEEEEEE--------SSCBCGGGCE---E----ESCCHHHHHHHHHHHHHHT
T ss_pred EeCCCceeeeeeE--------CCEEehhheE---E----ecccHHHHHHHHHHHHHhc
Confidence 9999999998883 1112222211 1 2699999999999888754
No 36
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.99 E-value=6.6e-10 Score=121.46 Aligned_cols=193 Identities=16% Similarity=0.104 Sum_probs=129.3
Q ss_pred HHHHHHHHHHh-CC--ceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEE
Q 004058 177 RKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQ 253 (776)
Q Consensus 177 R~~l~~Aa~~A-Gl--~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~ 253 (776)
-+.+.+|.+.+ |+ ++-. -||.||+++...+. +.+-.+.++||||||||++++. . ++.+.
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed---E~elGvaiIDmGgGTTd~sVf~------------~-g~lv~ 433 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTP---GCAAPLAILDLGAGSTDAAIVN------------A-EGQIT 433 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST---TCCSSEEEEEECSSEEEEEEEC------------S-SSCEE
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC---CCcCCeEEEEeCCCcceEEEEc------------C-CcEEE
Confidence 45678888888 99 6666 99999999876654 4456799999999999999993 1 12222
Q ss_pred EEEeecCCCCchHHHHHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccC----------CCceeEEE--
Q 004058 254 VKDVRWDAELGGQNMELRLVEYFADEFNKQVGNGVDVRKSPKAMAKLKKQVKRTKEILSA----------NTMAPISV-- 321 (776)
Q Consensus 254 v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~d~~~~~~~~~kL~~~~e~~K~~Ls~----------~~~~~i~i-- 321 (776)
... -..||+.++..|..-|.- .| +..||++|. ... .....+.+
T Consensus 434 a~~----ip~gG~~VT~DIA~~Lg~---------~d-----------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~ 488 (607)
T 1nbw_A 434 AVH----LAGAGNMVSLLIKTELGL---------ED-----------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFR 488 (607)
T ss_dssp EEE----EECCHHHHHHHHHHHHTC---------SC-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECS
T ss_pred EEE----eccchHHHHHHHHHHhCC---------CC-----------HHHHHHhcc-cCceeecccccccCCCCeEEEec
Confidence 222 268999999888755421 11 467899998 421 12224445
Q ss_pred eecc----cC-----cceEEEeeHHH--HHHHHHHHHHHHHHH--HHHHHHHCCC-----CCCCccEEEEecCccCcHHH
Q 004058 322 ESLY----VD-----IDFRSSITRQK--FEELCEDLWERSLVP--LREVLNYSGL-----KMDEIYAVELIGGGTRVPKL 383 (776)
Q Consensus 322 ~~l~----~~-----~d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~a~~-----~~~~i~~V~LvGG~sriP~v 383 (776)
+.+. .. .+.-..| +.. +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.+|.+
T Consensus 489 ~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI 566 (607)
T 1nbw_A 489 EALSPAVFAKVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEI 566 (607)
T ss_dssp SCCCGGGTTCEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSH
T ss_pred CCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccH
Confidence 3322 11 0112355 566 666 55555554443 4555777654 24577999999999999999
Q ss_pred HHHHHHHhCC-C------ccCCCCCcchhHHhHHHHHH
Q 004058 384 QAKLQEYLGR-T------ELDRHLDADEAIVLGASLLA 414 (776)
Q Consensus 384 ~~~l~~~f~~-~------~i~~~~n~deava~GAa~~a 414 (776)
.++..+.|+. . .....-+|..|+|.|.+++-
T Consensus 567 ~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 567 PQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp HHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred HHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhh
Confidence 9999999986 2 11224589999999999764
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.96 E-value=3.1e-10 Score=101.29 Aligned_cols=79 Identities=20% Similarity=0.410 Sum_probs=69.5
Q ss_pred HHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHh
Q 004058 672 TAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDGEDATAKEFQERLDVLKAIGDPVFFRFKE 751 (776)
Q Consensus 672 ~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g~~a~~~~~~~k~~~L~~~~~pi~~R~~e 751 (776)
+.++||.||+|||++|..|.+++ +...++++++++|...|.++.+||+++ ++++.++|++++++|+.++.||..|+++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e-~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEK-LQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGG-GTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchh-hhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999997544 888999999999999999999999754 4567899999999999999999999875
Q ss_pred h
Q 004058 752 L 752 (776)
Q Consensus 752 ~ 752 (776)
.
T Consensus 80 ~ 80 (113)
T 1ud0_A 80 S 80 (113)
T ss_dssp S
T ss_pred h
Confidence 3
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.43 E-value=5.8e-06 Score=85.52 Aligned_cols=72 Identities=22% Similarity=0.245 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHh
Q 004058 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANL 417 (776)
Q Consensus 341 ~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~l 417 (776)
+++..+++.+...+.+.++..+. .+.|+++||.++.|.+++.+.+.++. ++..+.+++.+.|+|||++|...
T Consensus 186 di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~-~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGV-EIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCS-CEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCC-CeEeCCCcchHhHHHHHHHHHHh
Confidence 33344444444444444443321 36799999999999999999999986 56667778779999999998764
No 39
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.82 E-value=4.9e-05 Score=85.77 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=87.4
Q ss_pred CcEEEEcCCCCCHHHHHHHHHHH-HHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccc
Q 004058 162 KDFVISVPPYFGQAERKGLMQAA-ELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNA 240 (776)
Q Consensus 162 ~~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~ 240 (776)
..+++|.|+.++...|+.|.+.+ +..|++.+.++.+|.||+++++. ..+-||+|+|+|+|+++.+.-
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-------~ttGLVVDiG~g~T~VvPV~e----- 289 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-------STSTCVVNIGAAETRIACVDE----- 289 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-------SSCEEEEEECSSCEEEEEEET-----
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-------CCceEEEcCCCceEEEEEEeC-----
Confidence 36999999999999999999987 45899999999999999988764 145799999999999999831
Q ss_pred cccCceeccCeEEEEEeecCCCCchHHHHHHHHHHHHHHHhhhcCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCC
Q 004058 241 KVYGKTVSVNQFQVKDVRWDAELGGQNMELRLVEYFADEFNKQVGN-GVDVRKSPKAMAKLKKQVKRTKEILSANT 315 (776)
Q Consensus 241 ~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~-~~d~~~~~~~~~kL~~~~e~~K~~Ls~~~ 315 (776)
|....... ....+||+++|..|.++|..+- +.+ ..++. ... =+..++.+|+.++.-.
T Consensus 290 ---G~vl~~ai-------~rL~iGG~dLT~yL~kLL~~rg---ypy~~~~f~--t~~---e~eiVrdIKEk~CyVs 347 (655)
T 4am6_A 290 ---GTVLEHSA-------ITLDYGGDDITRLFALFLLQSD---FPLQDWKID--SKH---GWLLAERLKKNFTTFQ 347 (655)
T ss_dssp ---TEECGGGC-------EEESCCHHHHHHHHHHHHHHTT---CSCCSCCTT--SHH---HHHHHHHHHHHHCCCC
T ss_pred ---CEEEhhhe-------eeecchHHHHHHHHHHHHHHcC---CCccccCCC--Ccc---hHHHHHHHHHheEEEc
Confidence 11111111 1137999999999999887641 001 01111 111 1355778888887653
No 40
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.16 E-value=0.051 Score=55.92 Aligned_cols=77 Identities=13% Similarity=-0.016 Sum_probs=54.6
Q ss_pred EeeHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecC-ccCcHHHHHHHHHHh--CCCccCCCCCcchhHHh
Q 004058 333 SITRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGG-GTRVPKLQAKLQEYL--GRTELDRHLDADEAIVL 408 (776)
Q Consensus 333 ~itr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG-~sriP~v~~~l~~~f--~~~~i~~~~n~deava~ 408 (776)
..+++++-. ++.-+.+++..+.....+.. .++.|+++|| .+..|.+++.+.+.+ ...++..+.++..+.|.
T Consensus 206 g~~~eDIaasl~~sV~~~I~~la~~~a~~~-----~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAl 280 (287)
T 2ews_A 206 DFTPSNKLAAVIGVVGEVVTTMAITVAREF-----KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAI 280 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHH
Confidence 346666543 34445555554444444443 3446999999 899999999999874 44577778899999999
Q ss_pred HHHHHH
Q 004058 409 GASLLA 414 (776)
Q Consensus 409 GAa~~a 414 (776)
|||+++
T Consensus 281 GAaL~~ 286 (287)
T 2ews_A 281 GALYLE 286 (287)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999864
No 41
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.05 E-value=1.2 Score=45.95 Aligned_cols=49 Identities=24% Similarity=0.253 Sum_probs=36.9
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHH
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ 416 (776)
+.+.|+|.||.+..+.+.+.+++.+...++.... .+.+.+.||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 4567999999887788888888877544454444 567899999988754
No 42
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.98 E-value=0.07 Score=55.90 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=46.0
Q ss_pred HHHHHHHHHhCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEEeeccccccCceeccCeEEEEEe
Q 004058 178 KGLMQAAELAGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYFSAYNAKVYGKTVSVNQFQVKDV 257 (776)
Q Consensus 178 ~~l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~~~~~~~~~~~~v~~~ 257 (776)
..+..+-+..|+++--+=.|.+|...+.+....+. .....+|+|+|||+|.+++++ ++.+. .
T Consensus 101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~--------------~~~~~---~ 162 (315)
T 1t6c_A 101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGK--------------GYKVR---E 162 (315)
T ss_dssp HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEE--------------TTEEE---E
T ss_pred HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEe--------------CCcee---e
Confidence 34444444679987544445555443333333232 245799999999999999983 22221 1
Q ss_pred ecCCCCchHHHHHHH
Q 004058 258 RWDAELGGQNMELRL 272 (776)
Q Consensus 258 ~~~~~lGG~~~D~~l 272 (776)
..+-.+|+..+.+.+
T Consensus 163 ~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 163 VISLPIGIVNLTETF 177 (315)
T ss_dssp EEEECCCHHHHHHHH
T ss_pred EEEEeccHHHHHHHh
Confidence 223479988876654
No 43
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.97 E-value=0.096 Score=55.04 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=29.5
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|++ +.+.|+..|+|++-..... ....+.++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~-~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGA-GQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCC-CCCCCCEEEEEeCcc-eEEEEE
Confidence 4787 5799999999997433221 122356888888877 555655
No 44
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.47 E-value=0.025 Score=64.38 Aligned_cols=87 Identities=16% Similarity=0.176 Sum_probs=59.8
Q ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHH
Q 004058 333 SITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (776)
Q Consensus 333 ~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~ 412 (776)
.-+|.++-.+++.+++.+.-.++..++...-....++.|.++||+++.|.+.+.+.+.||. ++.. +...|+.|+|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~-pV~~-~~~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGC-AMLL-PEESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCC-EEEE-ESCSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCC-eEEe-cCCCcchHHHHHH
Confidence 3478887544555555554444443332211123578899999999999999999999996 5543 3457899999999
Q ss_pred HHHHhcCCc
Q 004058 413 LAANLSDGI 421 (776)
Q Consensus 413 ~aa~ls~~~ 421 (776)
.|+.-.+.+
T Consensus 486 lA~~a~G~~ 494 (554)
T 3l0q_A 486 MGTVAAGVF 494 (554)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHcCCc
Confidence 998755543
No 45
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=95.42 E-value=0.11 Score=54.86 Aligned_cols=47 Identities=15% Similarity=-0.102 Sum_probs=39.6
Q ss_pred ccEEEEecC-ccCcHHHHHHHHHHhC-----CCccCCCCCcchhHHhHHHHHH
Q 004058 368 IYAVELIGG-GTRVPKLQAKLQEYLG-----RTELDRHLDADEAIVLGASLLA 414 (776)
Q Consensus 368 i~~V~LvGG-~sriP~v~~~l~~~f~-----~~~i~~~~n~deava~GAa~~a 414 (776)
++.|+++|| .+..|.+++.|.+.++ ..++..+.++..+-|.|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 345999999 9999999999999873 3456667789999999999875
No 46
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.38 E-value=3 Score=43.62 Aligned_cols=65 Identities=15% Similarity=0.107 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHh---CCCccCCCC---CcchhHHhHHHHHHHH
Q 004058 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYL---GRTELDRHL---DADEAIVLGASLLAAN 416 (776)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f---~~~~i~~~~---n~deava~GAa~~aa~ 416 (776)
+.+.+.+.+.++.+.. .++.|+|+||.+....+++.|.+.+ |. ++..+. -.|.+++.|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~-----~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~-~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRGI-KFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHTC-EEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-----CCCeEEEEccHHHHHHHHHHHHHHHHHcCC-EEEecCCCCCChhHHHHHHHHHHHH
Confidence 3334444445554433 3568999999999999999999876 33 343333 4477899998876543
No 47
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.24 E-value=0.036 Score=62.87 Aligned_cols=77 Identities=13% Similarity=0.130 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhc
Q 004058 340 EELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 340 e~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls 418 (776)
..+++.+++.+.-.++..++..+.....++.|.++||+++.|++.+.+.+.||. ++. .....|+.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~-~~~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDA-PVY-VIDTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTS-CEE-ECCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCC-ceE-ecCCCCchHHHHHHHHHHHh
Confidence 444555566665555666665554445678899999999999999999999996 443 33567899999999987643
No 48
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.23 E-value=1.4 Score=46.17 Aligned_cols=48 Identities=19% Similarity=0.232 Sum_probs=32.9
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCCC--------ccCCCCCcchhHHhHHHHHH
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGRT--------ELDRHLDADEAIVLGASLLA 414 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~--------~i~~~~n~deava~GAa~~a 414 (776)
+.+.|+|-||.+..+.+.+.|++.+... ++....-.+.+.++|||..+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 4568999999888877777777665431 22223345779999999764
No 49
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.16 E-value=0.042 Score=61.90 Aligned_cols=81 Identities=22% Similarity=0.220 Sum_probs=55.9
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHH
Q 004058 335 TRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLA 414 (776)
Q Consensus 335 tr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~a 414 (776)
+|.+| ++.+++.+.-.++..++...- .. ++.|.++||+++.|.+.+.+.+.||. ++...+.+.|+.|+|||+.|
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~~~~~~e~~alGaA~lA 448 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNV-SLLVKPDAHLHPLRGLAALA 448 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTC-EEEECCCGGGHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCC-eeEEecCCCCchHHHHHHHH
Confidence 55555 344444444444444433222 23 78999999999999999999999996 55133468899999999999
Q ss_pred HHhcCCc
Q 004058 415 ANLSDGI 421 (776)
Q Consensus 415 a~ls~~~ 421 (776)
+.-.+.+
T Consensus 449 ~~a~G~~ 455 (511)
T 3hz6_A 449 AVELEWS 455 (511)
T ss_dssp HHHTTSC
T ss_pred HHHhCCc
Confidence 8755543
No 50
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.13 E-value=0.028 Score=62.86 Aligned_cols=52 Identities=33% Similarity=0.440 Sum_probs=41.8
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhcC
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls~ 419 (776)
.++.|.++||+++.+.+.+.+.+.+|. ++......+.+.|+|||+.|+.-.+
T Consensus 386 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 386 KPQSVTLIGGGARSEYWRQMLADISGQ-QLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp CCSCEEEESGGGCCHHHHHHHHHHHCC-CEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred CcceEEEEeccccCHHHHHHHHHHhCC-eEEeCCCCCcccHHHHHHHHHHHcC
Confidence 467899999999999999999999986 5554444443589999999986544
No 51
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=94.96 E-value=0.049 Score=61.10 Aligned_cols=80 Identities=24% Similarity=0.218 Sum_probs=55.2
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHH
Q 004058 335 TRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLA 414 (776)
Q Consensus 335 tr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~a 414 (776)
+|.++ ++.+++.+.-.++..++...... .++.|.++||+++.|.+.+.+.+.+|. ++... ...|+.|+|||+.|
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNR-KVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTS-CEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCC-eEEEc-CCCcchHHHHHHHH
Confidence 45444 34444444444445544433222 678899999999999999999999986 55433 45669999999999
Q ss_pred HHhcCC
Q 004058 415 ANLSDG 420 (776)
Q Consensus 415 a~ls~~ 420 (776)
+.-.+.
T Consensus 439 ~~~~g~ 444 (497)
T 2zf5_O 439 GLAVDY 444 (497)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 875543
No 52
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=94.87 E-value=0.048 Score=61.30 Aligned_cols=53 Identities=13% Similarity=0.076 Sum_probs=44.0
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhcCCc
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGI 421 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls~~~ 421 (776)
.++.|.++||+++.|.+.+.+.+.||. ++.. ..+.|+.|+|||+.|+.-.+.+
T Consensus 393 ~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~lA~~a~G~~ 445 (504)
T 3ll3_A 393 KPVAINATGGFLKSDFVRQLCANIFNV-PIVT-MKEQQSGTLAAMFLARQALGLN 445 (504)
T ss_dssp CCSEEEEESGGGCSHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCchhcCHHHHHHHHHhhCC-eEEe-cCCCCchhHHHHHHHHHHcCcc
Confidence 578999999999999999999999996 5543 3467899999999998755543
No 53
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=94.70 E-value=0.037 Score=62.33 Aligned_cols=79 Identities=28% Similarity=0.375 Sum_probs=53.7
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHH
Q 004058 335 TRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (776)
Q Consensus 335 tr~efe~l-~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~ 413 (776)
+|.++-.. ++.+.-.+...+ +.|++.+. .++.|.++||+++.|.+.+.+.+.||. ++.. ....|+.|+|||+.
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l-~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~-~~~~e~~alGAA~l 468 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCL-ELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGM-DVTR-PATDEYVAIGAARQ 468 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEE-ECCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCC-ceEe-cCCcccHHHHHHHH
Confidence 55554332 233333333333 33444444 467899999999999999999999996 4533 35677999999999
Q ss_pred HHHhcC
Q 004058 414 AANLSD 419 (776)
Q Consensus 414 aa~ls~ 419 (776)
|+.-.+
T Consensus 469 A~~a~G 474 (515)
T 3i8b_A 469 AAWVLS 474 (515)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 986443
No 54
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=94.54 E-value=0.68 Score=47.98 Aligned_cols=44 Identities=18% Similarity=0.141 Sum_probs=28.2
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|+++ .+.|+..|||++-...... ...+.++++-+|.| +-.+++
T Consensus 98 ~~~pv-~v~NDa~aaal~E~~~g~~-~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRPV-FLENDANAAALAEHHLGAA-QGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSCE-EEEEHHHHHHHHHHHHSTT-TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCCE-EEEechHHHHHHHHHhCCC-CCCCCEEEEEECCc-eeEEEE
Confidence 47764 7999999999875432211 22356788888876 444554
No 55
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.30 E-value=1.4 Score=45.43 Aligned_cols=50 Identities=20% Similarity=0.202 Sum_probs=36.4
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCCC-----ccCCCCCcchhHHhHHHHHHHH
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGRT-----ELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~-----~i~~~~n~deava~GAa~~aa~ 416 (776)
+++.|+|-||.+..|.+.+.|++.+... .+....-.+.+.++||+.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4568999999988887778888777532 2333345577999999988764
No 56
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.27 E-value=0.058 Score=60.59 Aligned_cols=82 Identities=17% Similarity=0.246 Sum_probs=55.2
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHH
Q 004058 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (776)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~ 413 (776)
+|.+|-. +++.+.-.+...++..-+..+. .++.|.++||+++.+++.+.+.+.||. ++.. ..+.|+.|+|||+.
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~-pV~~-~~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNT-SVER-PEIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEE-ESCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCC-ceEe-cCCCcchHHHHHHH
Confidence 4555443 2233333334433333222444 467899999999999999999999996 4433 35678999999999
Q ss_pred HHHhcCCc
Q 004058 414 AANLSDGI 421 (776)
Q Consensus 414 aa~ls~~~ 421 (776)
|+.-.+.+
T Consensus 449 a~~a~G~~ 456 (501)
T 3g25_A 449 AGLAVGFW 456 (501)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98765544
No 57
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.21 E-value=0.054 Score=61.89 Aligned_cols=77 Identities=18% Similarity=0.237 Sum_probs=53.7
Q ss_pred eHHHHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCccEEEEecCcc-CcHHHHHHHHHHhCCCccCCCCCcchhHHhHH
Q 004058 335 TRQKFEELCEDLWERSLVPLRE---VLNYSGLKMDEIYAVELIGGGT-RVPKLQAKLQEYLGRTELDRHLDADEAIVLGA 410 (776)
Q Consensus 335 tr~efe~l~~~~~~~i~~~i~~---~l~~a~~~~~~i~~V~LvGG~s-riP~v~~~l~~~f~~~~i~~~~n~deava~GA 410 (776)
+|.+| ++.+++.+.-.++. .|+..+ ..++.|.++||++ +.+++.+.+.+.||. ++.. ..+.|+.|+||
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g---~~~~~i~~~GGga~ks~~~~Qi~ADv~g~-pV~~-~~~~e~~alGa 481 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRG---VEVHELYACGGLPQKNHLLMQIFADVTNR-EIKV-AASKQTPALGA 481 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTT---CCEEEEEEESSHHHHCHHHHHHHHHHHTS-CEEE-BCCSSHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcC---CCcCEEEEEcCchhhCHHHHHHHHHHHCC-eeEe-cCCCccHHHHH
Confidence 56654 33444443333333 334433 3578999999999 999999999999996 4433 35678999999
Q ss_pred HHHHHHhcC
Q 004058 411 SLLAANLSD 419 (776)
Q Consensus 411 a~~aa~ls~ 419 (776)
|+.|+.-.+
T Consensus 482 A~lA~~a~G 490 (572)
T 3jvp_A 482 AMFASVAAG 490 (572)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 999987554
No 58
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=93.98 E-value=4 Score=42.32 Aligned_cols=49 Identities=27% Similarity=0.300 Sum_probs=32.9
Q ss_pred ccEEEEecCccC-cHHHHHHHHHHhCC---------CccCCCCCcchhHHhHHHHHHHH
Q 004058 368 IYAVELIGGGTR-VPKLQAKLQEYLGR---------TELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 368 i~~V~LvGG~sr-iP~v~~~l~~~f~~---------~~i~~~~n~deava~GAa~~aa~ 416 (776)
.+.|+|.||.+. .|.+.+.+++.+.. .++......+.+.++|||.++..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 457999999876 57777777665532 12333334667899999988754
No 59
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=93.97 E-value=0.06 Score=60.52 Aligned_cols=81 Identities=20% Similarity=0.073 Sum_probs=54.1
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHH
Q 004058 335 TRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (776)
Q Consensus 335 tr~efe~l-~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~ 413 (776)
+|.+|-.. ++.+.-.+...++ .|+..+. .++.|.++||+++.|.+.+.+.+.||. ++... ...|+.|+|||+.
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~~-~~~e~~alGaA~l 444 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQR-PVQLL-ANPLGSAVGAAWV 444 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEEE-ECCSTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCC-eEEec-CCCCchHHHHHHH
Confidence 56555332 2333333333333 3344444 467899999999999999999999996 55433 3356999999999
Q ss_pred HHHhcCCc
Q 004058 414 AANLSDGI 421 (776)
Q Consensus 414 aa~ls~~~ 421 (776)
|+.-.+.+
T Consensus 445 A~~a~G~~ 452 (508)
T 3ifr_A 445 AAIGGGDD 452 (508)
T ss_dssp HHHHTCSS
T ss_pred HHHHhCCC
Confidence 98755543
No 60
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=93.95 E-value=0.1 Score=58.86 Aligned_cols=83 Identities=20% Similarity=0.213 Sum_probs=55.9
Q ss_pred eeHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHH
Q 004058 334 ITRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (776)
Q Consensus 334 itr~efe~l-~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~ 412 (776)
-+|.++-.. ++.+.-.+...++..-+..+. .++.|.++||+++.|++.+.+.+.||. ++.. ....|+.|+|||+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~-pV~~-~~~~E~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGT-RVER-PEVREVTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEE-ESCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCC-EEEe-CCCCchHHHHHHH
Confidence 355555332 233333333344333333454 467899999999999999999999986 5543 3556899999999
Q ss_pred HHHHhcCCc
Q 004058 413 LAANLSDGI 421 (776)
Q Consensus 413 ~aa~ls~~~ 421 (776)
.|+.-.+.+
T Consensus 446 lA~~a~G~~ 454 (526)
T 3ezw_A 446 LAGLAVGFW 454 (526)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHhCCC
Confidence 998766544
No 61
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=93.91 E-value=0.29 Score=51.29 Aligned_cols=49 Identities=18% Similarity=0.188 Sum_probs=32.8
Q ss_pred CccEEEEecCccCc-HHHHHHHHHHhC---------CCccCCCCCcchhHHhHHHHHHH
Q 004058 367 EIYAVELIGGGTRV-PKLQAKLQEYLG---------RTELDRHLDADEAIVLGASLLAA 415 (776)
Q Consensus 367 ~i~~V~LvGG~sri-P~v~~~l~~~f~---------~~~i~~~~n~deava~GAa~~aa 415 (776)
+.+.|+|-||.++. +.+.+.|++.+. ..++......+.+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 45789999998876 555555554432 12344455567899999998764
No 62
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=93.90 E-value=0.072 Score=59.85 Aligned_cols=82 Identities=21% Similarity=0.202 Sum_probs=55.0
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHH
Q 004058 335 TRQKFEEL-CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (776)
Q Consensus 335 tr~efe~l-~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~ 413 (776)
+|.+|-.. ++.+.-.+...++..-+..+. .++.|.++||+++.+++.+.+.+.+|. ++.. ..+.|+.|+|||+.
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDI-DVQR-AANLETTALGAAYL 447 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTS-EEEE-CSSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCC-eEEe-cCCCcchhHHHHHH
Confidence 55555432 233333333333332222343 467899999999999999999999996 5533 45678999999999
Q ss_pred HHHhcCCc
Q 004058 414 AANLSDGI 421 (776)
Q Consensus 414 aa~ls~~~ 421 (776)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98755544
No 63
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=93.88 E-value=0.11 Score=58.36 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=53.1
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHH
Q 004058 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (776)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~ 413 (776)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+.+.+.+|. ++.. ....|+.|+|||+.
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~-pV~~-~~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGV-PVAV-PEVTETTALGAALM 442 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCC-eeEe-cCCcccHHHHHHHH
Confidence 4555432 3333444444444332222233 457799999999999999999999986 5543 34567999999999
Q ss_pred HHHhcC
Q 004058 414 AANLSD 419 (776)
Q Consensus 414 aa~ls~ 419 (776)
|+.-.+
T Consensus 443 a~~a~G 448 (495)
T 2dpn_A 443 AGVGAG 448 (495)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 876444
No 64
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=93.77 E-value=0.054 Score=61.10 Aligned_cols=53 Identities=21% Similarity=0.173 Sum_probs=42.7
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhcCCc
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGI 421 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls~~~ 421 (776)
.++.|.++||+++.|.+.+.+.+.+|. ++.. ....|+.|+|||+.|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~-~~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDA-PVDR-PVILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCC-eEEe-cCCCccHHHHHHHHHHHHcCCc
Confidence 567899999999999999999999996 5543 3567899999999998765544
No 65
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=93.67 E-value=0.069 Score=60.10 Aligned_cols=53 Identities=25% Similarity=0.270 Sum_probs=43.5
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhcCCc
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSDGI 421 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls~~~ 421 (776)
.++.|.++||+++.+.+.+.+.+.+|. ++.. ..+.|+.|+|||+.|+.-.+.+
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~-pV~~-~~~~e~~alGaA~lA~~a~G~~ 453 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGT-RVER-PEVREVTALGAAYLAGLAVGFW 453 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEE-ESCCCHHHHHHHHHHHHHHTSS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCC-ceEe-cCCCCcHHHHHHHHHHHHhCcc
Confidence 467899999999999999999999996 5533 3467899999999998755543
No 66
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=93.01 E-value=0.11 Score=58.39 Aligned_cols=81 Identities=20% Similarity=0.143 Sum_probs=54.7
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHH
Q 004058 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLL 413 (776)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~ 413 (776)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||+++.+++.+.+.+.+|. ++.. ....|+.|+|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~-pV~~-~~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGV-DVVR-PKVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCC-eEEe-CCCCcchHHHHHHH
Confidence 4555543 3333444444444433222343 467899999999999999999999986 5543 35567999999999
Q ss_pred HHHhcCC
Q 004058 414 AANLSDG 420 (776)
Q Consensus 414 aa~ls~~ 420 (776)
|+.-.+.
T Consensus 448 A~~~~G~ 454 (504)
T 2d4w_A 448 AGIAVGF 454 (504)
T ss_dssp HHHHHTS
T ss_pred HHhhcCc
Confidence 9875543
No 67
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=92.79 E-value=0.13 Score=57.77 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=53.7
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCc-cEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHH
Q 004058 335 TRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEI-YAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASL 412 (776)
Q Consensus 335 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i-~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~ 412 (776)
+|.++-. +++.+.-.+...++..-+..+. .+ +.|.++||+++.|.+.+.+.+.+|. ++.. ....|+.|+|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~-pV~~-~~~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINT-KIEV-SKYKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTS-CEEE-ESCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCC-eEEe-cCCCcchHHHHHH
Confidence 4555443 3333444444444333222343 35 6799999999999999999999986 5543 3456799999999
Q ss_pred HHHHhcCC
Q 004058 413 LAANLSDG 420 (776)
Q Consensus 413 ~aa~ls~~ 420 (776)
.|+.-.+.
T Consensus 451 la~~~~G~ 458 (503)
T 2w40_A 451 LAGLEVKI 458 (503)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhCc
Confidence 99875543
No 68
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=92.64 E-value=0.13 Score=57.41 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=50.4
Q ss_pred EeeHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHH
Q 004058 333 SITRQKFEE-LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGAS 411 (776)
Q Consensus 333 ~itr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa 411 (776)
.-+|.+|-. +++.+.-.+...++..-+..+. .++.|.++||+++.+++.+.+.+.+|. ++... . .|+.++|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~-pV~~~-~-~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGI-RVIAG-P-VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTS-EEEEC-C-TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCC-eeecC-C-ccHhHHHHH
Confidence 445666543 2233333333333332221343 467899999999999999999999996 55433 3 589999996
Q ss_pred HHHHH
Q 004058 412 LLAAN 416 (776)
Q Consensus 412 ~~aa~ 416 (776)
+.|..
T Consensus 435 ~~A~~ 439 (489)
T 2uyt_A 435 GIQLM 439 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 69
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=92.33 E-value=12 Score=38.99 Aligned_cols=45 Identities=7% Similarity=0.051 Sum_probs=34.0
Q ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHHh-C---CceeeecchhHHHHHHh
Q 004058 160 AVKDFVISVPPYFGQAERKGLMQAAELA-G---MNVLSLVNEHSGAALQY 205 (776)
Q Consensus 160 ~~~~~VitVPa~f~~~qR~~l~~Aa~~A-G---l~~~~li~Ep~AAAl~y 205 (776)
++..+.|++|...+......+.+..+.. | ++ +.+.|+..|||+++
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATA 118 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHH
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhh
Confidence 5778999999999876655666665543 3 44 57999999999884
No 70
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=92.03 E-value=4 Score=43.60 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=27.9
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|++ +.+.|+..|||++...... .. +.++++-+|.| +-.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~--~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTK--RD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTT--CC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCC--CC-CcEEEEEeCCc-eEEEEE
Confidence 4776 5799999999988533221 11 56778888877 445555
No 71
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=90.37 E-value=1.7 Score=45.38 Aligned_cols=44 Identities=20% Similarity=0.145 Sum_probs=28.5
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|++ +.+.|+..|||++-..... ....+.++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~-~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDE-FTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTT-GGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCc-CCCCCcEEEEEECCc-EEEEEE
Confidence 4776 5799999999987432211 112357888888877 445555
No 72
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=89.82 E-value=0.71 Score=48.17 Aligned_cols=56 Identities=13% Similarity=0.200 Sum_probs=36.0
Q ss_pred HHHHHHHHHhCCceeeecchhHHHHHHh-ccccCCCCCCcEEEEEEecCccceeeEEE
Q 004058 178 KGLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALVY 234 (776)
Q Consensus 178 ~~l~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 234 (776)
..+..+-+..|+++ .+|+..+=|.+.| +....++......+|+|+|||+|.+++++
T Consensus 93 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 93 VLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp HHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC
T ss_pred HHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE
Confidence 34444555679987 5666555444444 33222332235799999999999999993
No 73
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=88.44 E-value=5.2 Score=44.02 Aligned_cols=58 Identities=14% Similarity=0.120 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHhCCce--eeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEEE
Q 004058 173 GQAERKGLMQAAELAGMNV--LSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVYF 235 (776)
Q Consensus 173 ~~~qR~~l~~Aa~~AGl~~--~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 235 (776)
...-.+.+.+|.+.-|+++ +.++|+..|++++..+.. +..++-+=+|-|+=-+.+.++
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-----~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-----PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-----TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-----CCcEEEEEEecCcceEEEeec
Confidence 4556778899998888864 789999999999866542 345555557877555444443
No 74
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=88.05 E-value=7 Score=42.42 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=28.5
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|++ +.+.|+..|||++-..... ....+.++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~-~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGH-SQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCC-CCCCCcEEEEEECCc-EEEEEE
Confidence 4777 4799999999987433221 112356777888877 445555
No 75
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=88.05 E-value=0.53 Score=52.29 Aligned_cols=71 Identities=11% Similarity=0.024 Sum_probs=51.1
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHH-hCCCccCCCCCcchhHHhHHHHHHHH
Q 004058 340 EELCEDLWER--SLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEY-LGRTELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 340 e~l~~~~~~~--i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~-f~~~~i~~~~n~deava~GAa~~aa~ 416 (776)
..+.+.+++. +.-.++..++...- .+.|.++||+++.|+..+.+.+. ||. ++..+ ...|+.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~-pV~~~-~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDC-AVYTA-NAHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTS-EEEEE-SSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCC-eEEEc-CCCchHHHHHHHHhCc
Confidence 4455555553 44444555554432 26899999999999999999999 996 55433 4567899999999975
No 76
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=87.01 E-value=1.3 Score=46.61 Aligned_cols=56 Identities=13% Similarity=0.138 Sum_probs=36.7
Q ss_pred HHHHHHHHHhCCceeeecchhHHHHHHh-ccccCCCC--CCcEEEEEEecCccceeeEEE
Q 004058 178 KGLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSN--ESRHVVFYDMGATTTYAALVY 234 (776)
Q Consensus 178 ~~l~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~--~~~~vlV~D~GggT~dvsv~~ 234 (776)
..+..+-+..|+++ .+|+-.+=|.+.| +....+.. ....++|+|+|||+|+++++.
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~ 164 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGG 164 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECC
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEee
Confidence 34444445569986 6777666666555 22222222 235699999999999999983
No 77
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=84.27 E-value=42 Score=34.85 Aligned_cols=67 Identities=15% Similarity=0.125 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCC--ccCCC---CCcchhHHhHHHHHHHHh
Q 004058 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRH---LDADEAIVLGASLLAANL 417 (776)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~--~i~~~---~n~deava~GAa~~aa~l 417 (776)
+.+.+.+.+.++++..+ ++.|+|.||.+...++++.|.+.+... ++..+ +-.|.+++.|+|.+....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 304 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYK 304 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHH
Confidence 44445555566665543 468999999999999999999887321 33222 245889999998765443
No 78
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=80.94 E-value=4.5 Score=45.11 Aligned_cols=53 Identities=15% Similarity=0.298 Sum_probs=34.5
Q ss_pred HHHHHHHhCCceeeecchhHHHHHHh-ccccCCCCCCcEEEEEEecCccceeeEEE
Q 004058 180 LMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALVY 234 (776)
Q Consensus 180 l~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 234 (776)
+..+-+..|+++ .+|+..+=|.+.| +....++.. ...+|+|+|||+|.+++.+
T Consensus 102 l~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~-~~~lviDIGGGStEl~~~~ 155 (513)
T 1u6z_A 102 LKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEK-GRKLVIDIGGGSTELVIGE 155 (513)
T ss_dssp HHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCC-SCEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCC-CCEEEEEECCCcEEEEEEe
Confidence 333334469886 6777766665555 332222222 2699999999999999983
No 79
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=79.90 E-value=13 Score=37.03 Aligned_cols=17 Identities=18% Similarity=0.218 Sum_probs=15.8
Q ss_pred cEEEEEcCccceEEEEE
Q 004058 25 AVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (776)
..++||.|+|+++.+++
T Consensus 4 M~L~IDIGNT~ik~gl~ 20 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSIT 20 (249)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred eEEEEEECCCeEEEEEE
Confidence 37999999999999999
No 80
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=79.34 E-value=3.5 Score=45.90 Aligned_cols=55 Identities=13% Similarity=0.151 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCCceeeecchhHHHHHHh-ccccCCCCCCcEEEEEEecCccceeeEEE
Q 004058 177 RKGLMQAAELAGMNVLSLVNEHSGAALQY-GIDKDFSNESRHVVFYDMGATTTYAALVY 234 (776)
Q Consensus 177 R~~l~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 234 (776)
...+..+-+..|+++ .+|+-.+=|.+.| +....++. ...+|+|+|||+|.+++++
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~--~~~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQ--PDGIAGDLGGGSLELIDIK 158 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSS--CEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCC--CCeEEEEeCCCceEEEEee
Confidence 334455555679986 6777666555554 33222332 2359999999999999984
No 81
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=76.52 E-value=13 Score=40.70 Aligned_cols=54 Identities=11% Similarity=-0.006 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhCCc--eeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 175 AERKGLMQAAELAGMN--VLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 175 ~qR~~l~~Aa~~AGl~--~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.-++.+.++.+.-|++ ++.++|+..|++++-.+.. .+.++.+=+|-|+=-.-+.
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~-----~~~~iglilGTGvgg~~i~ 219 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD-----AXIKMGIIFGSGVNAAYWC 219 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC-----TTEEEEEEESSSEEEEEEE
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC-----CccEEEEEECcEEEEEEEE
Confidence 4567788887666775 4799999999999865522 3466666678875444444
No 82
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=75.97 E-value=50 Score=36.76 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhC
Q 004058 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLG 392 (776)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~ 392 (776)
+++.+.+.+..+++..+ ++.|+|+||-+....+++.|.+.+.
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~ 273 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCE 273 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHH
Confidence 34444455556665544 4689999999999999999998764
No 83
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=75.32 E-value=3.4 Score=43.62 Aligned_cols=44 Identities=14% Similarity=0.268 Sum_probs=28.9
Q ss_pred CCceeeecchhHHHHHHh-----ccccCCC-CCCcEEEEEEecCccceeeEE
Q 004058 188 GMNVLSLVNEHSGAALQY-----GIDKDFS-NESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 188 Gl~~~~li~Ep~AAAl~y-----~~~~~~~-~~~~~vlV~D~GggT~dvsv~ 233 (776)
|+. +++|+-.+=|.+.| .+.. +. ..+++++|+|+|||+|.+++.
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~-~~~~~~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDT-LKSVQNKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTC-SSSCCSSCEEEEEECSSEEEEEEE
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhh-ccccccccEEEEEeCCCceEEEEe
Confidence 544 47777665555544 2321 11 223579999999999999987
No 84
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=73.54 E-value=44 Score=33.19 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=28.9
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|++ +.+.|+..|||++.............++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4777 58999999999985332211122235677778876 666665
No 85
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=73.22 E-value=29 Score=37.73 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=40.5
Q ss_pred CCCCCHHHHHHHHHHHHHhCCce--eeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 169 PPYFGQAERKGLMQAAELAGMNV--LSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 169 Pa~f~~~qR~~l~~Aa~~AGl~~--~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
|..-...-.+.+.+|...-|+++ +.++|+..|++++.+... +..++.+=+|-|+=-.-+.
T Consensus 167 ~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-----~~~~iglIlGTG~na~yve 228 (451)
T 1bdg_A 167 DGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-----PKCAVGLIVGTGTNVAYIE 228 (451)
T ss_dssp BTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEE
T ss_pred CCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-----CCcEEEEEEeCCcceEEEE
Confidence 33334556788888887778863 589999999998865542 3456666678875444444
No 86
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=72.93 E-value=8.8 Score=40.43 Aligned_cols=66 Identities=21% Similarity=0.152 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCc------cCCCCCcchhHHhHHHHHHHH
Q 004058 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTE------LDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~------i~~~~n~deava~GAa~~aa~ 416 (776)
+.+-+...|-+.++... ..++.|+++||+++.|.+.+.|++.++..+ +..+.+.-||++ -|++|..
T Consensus 265 Lt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~a--FA~LA~~ 336 (371)
T 3qbx_A 265 LLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMA--FAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHH--HHHHHHH
Confidence 33333444445554432 145789999999999999999999997432 233334444444 5566554
No 87
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=72.03 E-value=9 Score=44.81 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCC--ccCCCC---CcchhHHhHHHHHHHHhc
Q 004058 350 SLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT--ELDRHL---DADEAIVLGASLLAANLS 418 (776)
Q Consensus 350 i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~--~i~~~~---n~deava~GAa~~aa~ls 418 (776)
+.+.+..+.+.. .++.|+|.||....-.+.+.|.+.+... ++..+. --|..+|+|+|++|+..-
T Consensus 693 L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 693 FAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 344455555543 4567999999999999999999987543 232221 248999999998886543
No 88
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=70.59 E-value=4.7 Score=33.91 Aligned_cols=17 Identities=29% Similarity=0.468 Sum_probs=16.1
Q ss_pred cEEEEEcCccceEEEEE
Q 004058 25 AVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (776)
.++|||||+..+.+|+.
T Consensus 2 riLglD~G~kriGvAvs 18 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVG 18 (98)
T ss_dssp CEEEEEESSSEEEEEEE
T ss_pred cEEEEEeCCCEEEEEEE
Confidence 58999999999999998
No 89
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=69.83 E-value=9.8 Score=40.10 Aligned_cols=70 Identities=17% Similarity=0.168 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCC------ccCCCCCcchhHHhHHHHHH
Q 004058 341 ELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRT------ELDRHLDADEAIVLGASLLA 414 (776)
Q Consensus 341 ~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~------~i~~~~n~deava~GAa~~a 414 (776)
++..-+.+-+...|.+.++... ..+.|+++||+++.|.+.+.|++.++.. .+..+.+.-||++. |++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 3344444444555556665432 3568999999999999999999999652 33344555566665 5555
Q ss_pred HH
Q 004058 415 AN 416 (776)
Q Consensus 415 a~ 416 (776)
..
T Consensus 341 ~~ 342 (370)
T 3cqy_A 341 MR 342 (370)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 90
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=64.81 E-value=1.2 Score=48.68 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhC---CceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 175 AERKGLMQAAELAG---MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 175 ~qR~~l~~Aa~~AG---l~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.-.+.+++|.+.-| ++++.++|+.+|.-++.++.. +...+-+=+|-||= ++.+
T Consensus 185 DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-----~~~~iGlI~GTGtN-a~Y~ 240 (470)
T 3f9m_A 185 NVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-----HQCEVGMIVGTGCN-ACYM 240 (470)
T ss_dssp BHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEE-EEEE
T ss_pred cHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-----CCceEEEEEecCCc-eEEe
Confidence 34556666776666 467899999999877755432 23444444677754 4444
No 91
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=63.42 E-value=21 Score=36.51 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=28.4
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|++ +.+.|+..|||++-..... ....++++++-+|-| .-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~-~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGE-AXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-TTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCC-CCCCCcEEEEEECCc-eEEEEE
Confidence 4787 5799999999997433221 122356788878765 445555
No 92
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=62.65 E-value=28 Score=39.69 Aligned_cols=66 Identities=26% Similarity=0.312 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCcc---CCCCCcchhHHhHHHHHHHH
Q 004058 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTEL---DRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i---~~~~n~deava~GAa~~aa~ 416 (776)
+++.+.+.+.++.+.. .++.|+|+||-+...++++.|.+.+..-++ ...+-.|-++++|.|+.|+.
T Consensus 583 la~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3334444444444433 456899999999999999999998732222 22344588999999998864
No 93
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=61.96 E-value=7.8 Score=42.36 Aligned_cols=43 Identities=9% Similarity=0.213 Sum_probs=28.7
Q ss_pred ceeeecchhHHHHHHh-----ccccCC----------CCCCcEEEEEEecCccceeeEE
Q 004058 190 NVLSLVNEHSGAALQY-----GIDKDF----------SNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 190 ~~~~li~Ep~AAAl~y-----~~~~~~----------~~~~~~vlV~D~GggT~dvsv~ 233 (776)
..+++|+-.+=|.+.| .+.. + ......++|+|+|||++.++..
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~-~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~ 207 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLEN-FIKYGWVGRWIRPRKGTLGAMDLGGASTQITFE 207 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTT-TSCCEETTEECSSCCCCCEEEEECSSEEEEEEE
T ss_pred CceEEcCchHHhhhhHHHHHhhhcc-cccccccccccccCCCceEEEEcCCCceEEEec
Confidence 3468888766665554 3321 1 0113568999999999999987
No 94
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=61.07 E-value=23 Score=41.28 Aligned_cols=52 Identities=29% Similarity=0.293 Sum_probs=39.1
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCC--CccC---CCCCcchhHHhHHHHHHHHhc
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGR--TELD---RHLDADEAIVLGASLLAANLS 418 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~--~~i~---~~~n~deava~GAa~~aa~ls 418 (776)
.++.|+|+||-+....+++.|.+.+.. -++. ..+-.|-++|+|.|++|+...
T Consensus 693 g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 693 GINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 456899999999999999999988632 1221 223358899999999987543
No 95
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=60.64 E-value=1.8 Score=46.93 Aligned_cols=147 Identities=18% Similarity=0.201 Sum_probs=0.0
Q ss_pred EEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCcccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHHHhhCCCchhh
Q 004058 26 VSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKRKSPALVAFHESTRLLGEEASGIIARYPHRVYSQLRDMIGKPFKQV 105 (776)
Q Consensus 26 vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llG~~~~~~ 105 (776)
+++||||.||.+|+.+....+ +...+....+|.-+.-..++.+|..-|.....--...-..+-+.-||-
T Consensus 61 ~LAlDlGGTn~RV~~V~l~g~------~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~~~~lplGf----- 129 (445)
T 3hm8_A 61 FLALDLGGTNFRVLLVRVTTG------VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGF----- 129 (445)
T ss_dssp EEEEEESSSSEEEEEEEESSS------EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCTTCCCCEEE-----
T ss_pred EEEEEecCCeEEEEEEEECCc------eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcccccCcceE-----
Q ss_pred HhhHhhcCCCceEeeCC-CCceEEEeCCCccccHHHHHHHHHHHHHHHHHhhcCCCCCcEEEEcCCCCCHHHHHHHHHHH
Q 004058 106 KHLIDSLYLPFNVVEDS-RGAVSFKIDENNNFSVEELLAMVLSYAVNLVDTHAKLAVKDFVISVPPYFGQAERKGLMQAA 184 (776)
Q Consensus 106 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa 184 (776)
-++|.+.+.. +....+.+..| +.+|..-...-.+.+.+|.
T Consensus 130 -------tFSFP~~Q~sl~~g~Li~wtKG--------------------------------F~~~~~~G~dv~~lL~~al 170 (445)
T 3hm8_A 130 -------TFSFPCRQLGLDQGILLNWTKG--------------------------------FKASDCEGQDVVSLLREAI 170 (445)
T ss_dssp -------EECSCEECSSTTCCEECCCCTT--------------------------------CCCBTCTTSBHHHHHHHHH
T ss_pred -------EEeeeeEeccCCceEEEEeecc--------------------------------ccCCCCCCCcHHHHHHHHH
Q ss_pred HHhC---CceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCcc
Q 004058 185 ELAG---MNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATT 227 (776)
Q Consensus 185 ~~AG---l~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT 227 (776)
+.-| ++++.++|+.+|+.++.++.. +...+-+=+|-||
T Consensus 171 ~r~~~~~v~vvAivNDTvgTLla~~y~~-----~~~~iglIlGTGt 211 (445)
T 3hm8_A 171 TRRQAVELNVVAIVNDTVGTMMSCGYED-----PRCEIGLIVGTGT 211 (445)
T ss_dssp HHTTCSCCCSEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSE
T ss_pred HhcCCCCcceEEEecCcHHHHHhhccCC-----CCceEEEEEeCCc
No 96
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=58.44 E-value=36 Score=34.29 Aligned_cols=50 Identities=12% Similarity=0.087 Sum_probs=32.5
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCC-----------CccCCCCCcchhHHhHHHHHHHH
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGR-----------TELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~-----------~~i~~~~n~deava~GAa~~aa~ 416 (776)
+.+.|+|.||.+..|.+.+.+++.+.. .++....-.+.+.++||+.++..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 346799999987777666666654321 12333334567899999988764
No 97
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=53.11 E-value=43 Score=37.54 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=52.2
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCCCccC-CCCCcchhHHhHHHHH
Q 004058 336 RQKFEELCED-LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGRTELD-RHLDADEAIVLGASLL 413 (776)
Q Consensus 336 r~efe~l~~~-~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~-~~~n~deava~GAa~~ 413 (776)
+.++-..++. +.+-+.+.+..+.+.. .++.|.|.||.+....+++.|.+..+...+. .+...|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~t-----g~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLART-----GERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 3444444443 3333444455555543 4678999999999999999998765432222 2345689999999999
Q ss_pred HHHhcC
Q 004058 414 AANLSD 419 (776)
Q Consensus 414 aa~ls~ 419 (776)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 876643
No 98
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=52.55 E-value=86 Score=32.91 Aligned_cols=122 Identities=14% Similarity=0.122 Sum_probs=0.0
Q ss_pred hhhcCCCCcEEEEEcCccceEEEEEEeeCCCCCEEEEeCCCCCc-ccceEEEEeCCceEEcHhHHHhHhhCcchHHHHHH
Q 004058 17 LLVSHSQSAVSSVDLGSEWLKVAVVNLKPGQSPISIAINEMSKR-KSPALVAFHESTRLLGEEASGIIARYPHRVYSQLR 95 (776)
Q Consensus 17 ~~~~~~~~~vvGID~GTt~s~va~~~~~~g~~~v~ii~n~~g~r-~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K 95 (776)
.........++|||+|.|++.+++++ .| +++ ..+ ..|+
T Consensus 2 ~~~n~d~~~~lgiDIGgt~i~~~l~d--~G----~il----~~~~~~~~------------------------------- 40 (366)
T 3mcp_A 2 MMYTNDNRIVMTLDAGGTNFVFSAIQ--GG----KEI----ADPVVLPA------------------------------- 40 (366)
T ss_dssp CTTTTCCCEEEEEECSSSEEEEEEEE--TT----EEC----SCCEEEEC-------------------------------
T ss_pred ccCCCCCCEEEEEEECcceEEEEEEE--CC----EEE----EEEEEEEC-------------------------------
Q ss_pred HhhCCCchhhHhhHhhcCCCceEeeCCCCceEEEeCCCccccHHHHHHHHHH---HHHHHHHhhcCCCCCcEEEEcCC--
Q 004058 96 DMIGKPFKQVKHLIDSLYLPFNVVEDSRGAVSFKIDENNNFSVEELLAMVLS---YAVNLVDTHAKLAVKDFVISVPP-- 170 (776)
Q Consensus 96 ~llG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~---~l~~~a~~~~~~~~~~~VitVPa-- 170 (776)
...++++++..+.. .+.+... .++..+.|++|.
T Consensus 41 --------------------------------------~~~~~~~~l~~i~~~~~~i~~~~~----~~i~gIGIavPG~V 78 (366)
T 3mcp_A 41 --------------------------------------CADCLDKCLGNLVEGFKAIQAGLP----EAPVAISFAFPGPA 78 (366)
T ss_dssp --------------------------------------CTTCHHHHHHHHHHHHHHHHTTCS----SCCCEEEEECCSSE
T ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHhh----cCCeEEEEEecceE
Q ss_pred --------------CCC--HHHHHHHHHHHHHhCCceeeecchhHHHHHHhcccc-------------CCCCCCcEEEEE
Q 004058 171 --------------YFG--QAERKGLMQAAELAGMNVLSLVNEHSGAALQYGIDK-------------DFSNESRHVVFY 221 (776)
Q Consensus 171 --------------~f~--~~qR~~l~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~-------------~~~~~~~~vlV~ 221 (776)
.|. -.-++.+.+.. |++ +.+.|+..|+|++-.... ..... ++++++
T Consensus 79 d~~~G~i~~~~nlp~w~~~~~l~~~L~~~~---g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~-~~~v~l 153 (366)
T 3mcp_A 79 DYQAGIIGDLPNFPSFRGGVALGPFLEDIF---GIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRY-KNLLGV 153 (366)
T ss_dssp ETTTTEECCCTTCGGGTTCBCHHHHHHHHH---CSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCC-CEEEEE
T ss_pred eCCCCEEEeCCCcccccCCCCHHHHHHHHH---CCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCC-CcEEEE
Q ss_pred EecCc
Q 004058 222 DMGAT 226 (776)
Q Consensus 222 D~Ggg 226 (776)
-+|-|
T Consensus 154 ~lGtG 158 (366)
T 3mcp_A 154 TLGTG 158 (366)
T ss_dssp EESSS
T ss_pred EECCc
No 99
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=52.26 E-value=19 Score=39.20 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=27.4
Q ss_pred eeeecchhHHHHHH-----hccccCCCC-CCcEEEEEEecCccceeeEEE
Q 004058 191 VLSLVNEHSGAALQ-----YGIDKDFSN-ESRHVVFYDMGATTTYAALVY 234 (776)
Q Consensus 191 ~~~li~Ep~AAAl~-----y~~~~~~~~-~~~~vlV~D~GggT~dvsv~~ 234 (776)
.+++|+..+=+.++ |.+.. +.. ...++.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~-l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR-FKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT-TC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc-ccCCCCCceEEEecCCCceEEEecc
Confidence 46778766555444 43332 111 235688999999999999873
No 100
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=51.99 E-value=45 Score=35.48 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=28.5
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|++ +.+.|+..|||++...... ....+.++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~-~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGA-SRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHST-TTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcC-CCCCCcEEEEEECCc-EEEEEE
Confidence 4777 5799999999987433211 112356788888877 455555
No 101
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=51.56 E-value=33 Score=41.05 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHh-CC--ceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 173 GQAERKGLMQAAELA-GM--NVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 173 ~~~qR~~l~~Aa~~A-Gl--~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
...-.+.+.+|...- |+ +++.++|+..|++++.+... +..++.+=+|-|+=-..+.
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~-----~~~~iglIlGTG~na~y~e 688 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE-----PTCEVGLIVGTGSNACYME 688 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC-----CCcEEEEEEeCCeeEEEEE
Confidence 445577788887644 55 58999999999988865542 3455555577775444333
No 102
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=51.41 E-value=7.5 Score=35.45 Aligned_cols=18 Identities=33% Similarity=0.455 Sum_probs=16.8
Q ss_pred CcEEEEEcCccceEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (776)
|.++|||+|+..+++|+.
T Consensus 3 mriLGiDpG~~riGvAv~ 20 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALS 20 (150)
T ss_dssp EEEEEEEECSSEEEEEEE
T ss_pred CEEEEEEccCCEEEEEEE
Confidence 469999999999999998
No 103
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=49.28 E-value=15 Score=34.00 Aligned_cols=19 Identities=32% Similarity=0.435 Sum_probs=17.0
Q ss_pred CcEEEEEcCccceEEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~ 42 (776)
|-++|||.|++++..+++.
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 4689999999999999984
No 104
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=48.82 E-value=11 Score=41.82 Aligned_cols=20 Identities=15% Similarity=0.204 Sum_probs=17.7
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (776)
+..++|||+|||++++++++
T Consensus 3 m~~~lgIDiGtts~K~~l~d 22 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYD 22 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEecCCceEEEEEc
Confidence 34799999999999999994
No 105
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=48.75 E-value=1.5e+02 Score=26.71 Aligned_cols=92 Identities=22% Similarity=0.254 Sum_probs=55.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCCHHHHHHHHHHHHHHHHhhhhcC
Q 004058 644 GASLSKEALVDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVSTSEERQSFVEKLDEAQEWLYTDG 723 (776)
Q Consensus 644 ~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~~~e~~~l~~~l~e~~~WL~~~g 723 (776)
..|...+++...-..++.-...|...|++ |-.+...+.+.+-+.+..+.++-+++.+.++++..-|.+--
T Consensus 19 ~~p~~~~elik~L~~le~sassDa~vrq~----------Ia~LP~eVsd~s~l~klkDk~~~e~l~~~veeA~~~L~eYn 88 (152)
T 4fla_A 19 AGPLLTEELIKALQDLENAASGDATVRQK----------IASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYN 88 (152)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHH----------HHTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhccccchHHHHHH----------HHcCCccccCHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888888888888899888866 33444555554435555566667888888888777776531
Q ss_pred CCCCHHHHHHHHHHHHHhhhHHH
Q 004058 724 EDATAKEFQERLDVLKAIGDPVF 746 (776)
Q Consensus 724 ~~a~~~~~~~k~~~L~~~~~pi~ 746 (776)
..-..+++++.+-++.+.+-+.
T Consensus 89 -~rL~~E~~dR~~L~~~L~~~~~ 110 (152)
T 4fla_A 89 -GRLAAELEDRRQLARMLVEYTQ 110 (152)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHH
Confidence 2233344444444444444333
No 106
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=48.39 E-value=12 Score=34.36 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=16.9
Q ss_pred CcEEEEEcCccceEEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~ 42 (776)
|.++|||.|++++..+++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 4589999999999999984
No 107
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=48.31 E-value=12 Score=33.49 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=16.2
Q ss_pred cEEEEEcCccceEEEEE
Q 004058 25 AVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (776)
.++|||||+..+.+|+.
T Consensus 4 ~iLglD~G~kriGvAvs 20 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVG 20 (138)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred eEEEEEeCCCEEEEEEE
Confidence 58999999999999998
No 108
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=45.97 E-value=12 Score=41.91 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=18.2
Q ss_pred CCCCcEEEEEcCccceEEEEEE
Q 004058 21 HSQSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 21 ~~~~~vvGID~GTt~s~va~~~ 42 (776)
..+..++|||+|||.+++++++
T Consensus 7 ~~~~~~lgID~GTts~Ka~l~d 28 (538)
T 4bc3_A 7 APRRCCLGWDFSTQQVKVVAVD 28 (538)
T ss_dssp --CCEEEEEEECSSEEEEEEEE
T ss_pred CCCCEEEEEEEcCcCEEEEEEC
Confidence 3456899999999999999994
No 109
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=44.86 E-value=14 Score=41.44 Aligned_cols=20 Identities=25% Similarity=0.338 Sum_probs=17.9
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (776)
+..+||||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEECcccEEEEEEC
Confidence 45799999999999999994
No 110
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=44.85 E-value=37 Score=26.47 Aligned_cols=46 Identities=20% Similarity=0.242 Sum_probs=37.3
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhhhhHHHHHHhhccCccccccCCC
Q 004058 653 VDAEAKLEELDKKDADRRRTAELKNNLEGYIYATKEKFETSEDYEKVST 701 (776)
Q Consensus 653 ~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~ 701 (776)
..+.++.+++...|...++++......|+-|-.+|+.|+. |+.+++
T Consensus 26 ~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK---frSVl~ 71 (72)
T 3nmd_A 26 YALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK---YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhccCC
Confidence 3455677888899999999999999999999999998864 666553
No 111
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=44.59 E-value=12 Score=38.14 Aligned_cols=24 Identities=21% Similarity=0.340 Sum_probs=16.4
Q ss_pred hhcCCCCcEEEEEcCccceEEEEE
Q 004058 18 LVSHSQSAVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 18 ~~~~~~~~vvGID~GTt~s~va~~ 41 (776)
+++......+|||+|+|.++++++
T Consensus 14 ~~~~~~~~~iGIDiGsTt~K~V~~ 37 (287)
T 2ews_A 14 LVPRGSHMKVGIDAGGTLIKIVQE 37 (287)
T ss_dssp -------CEEEEEECSSEEEEEEE
T ss_pred cccCCCCeEEEEEEChhhEEEEEE
Confidence 344456679999999999999998
No 112
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=44.47 E-value=10 Score=41.82 Aligned_cols=20 Identities=25% Similarity=0.283 Sum_probs=17.7
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (776)
+..++|||+|||++++++++
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 44689999999999999994
No 113
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=44.14 E-value=36 Score=34.18 Aligned_cols=49 Identities=27% Similarity=0.253 Sum_probs=33.6
Q ss_pred CccEEEEecCccCcHHHHHHHHHHhCCC------ccCCCCCcchhHHhHHHHHHH
Q 004058 367 EIYAVELIGGGTRVPKLQAKLQEYLGRT------ELDRHLDADEAIVLGASLLAA 415 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~v~~~l~~~f~~~------~i~~~~n~deava~GAa~~aa 415 (776)
+.+.|+|.||.+..|.+.+.+++.+... ++......+.+.++|||.++.
T Consensus 233 ~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 233 DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 3457888888877788888888776542 222233456689999998753
No 114
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=44.02 E-value=12 Score=41.76 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=16.7
Q ss_pred CcEEEEEcCccceEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (776)
..+||||+|||+++++++
T Consensus 4 kYvlgID~GTss~Ka~l~ 21 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVM 21 (526)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred eEEEEEEccccceeeeEE
Confidence 468999999999999999
No 115
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=42.59 E-value=28 Score=35.68 Aligned_cols=48 Identities=13% Similarity=0.020 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 343 CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 343 ~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
.+...+.+...++++|+++++++++|++|+..|+++++ -+.+.+.|+.
T Consensus 213 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 260 (317)
T 1hnj_A 213 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGM 260 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 34455677888999999999999999999999998765 4578888875
No 116
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=42.55 E-value=14 Score=41.01 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=16.8
Q ss_pred CcEEEEEcCccceEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (776)
..++|||+|||+++++++
T Consensus 3 ~~~lgIDiGtts~k~~l~ 20 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVM 20 (510)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEcCCcceEEEEE
Confidence 468999999999999999
No 117
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=42.47 E-value=13 Score=40.89 Aligned_cols=18 Identities=33% Similarity=0.418 Sum_probs=15.7
Q ss_pred CcEEEEEcCccceEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (776)
..++|||+|||+++++++
T Consensus 6 ~~~lgIDiGTts~Ka~l~ 23 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLW 23 (482)
T ss_dssp --CEEEEECSSEEEEEEE
T ss_pred ceEEEEEcCCCCeEEEEE
Confidence 469999999999999999
No 118
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=42.42 E-value=16 Score=40.56 Aligned_cols=20 Identities=20% Similarity=0.391 Sum_probs=17.7
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (776)
+..++|||+|||++++++++
T Consensus 4 m~~~lgIDiGtts~k~~l~d 23 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALAD 23 (511)
T ss_dssp CCEEEEEEECSSEEEEEEEC
T ss_pred ccEEEEEEeCCCceEEEEEC
Confidence 34799999999999999993
No 119
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=41.78 E-value=14 Score=41.26 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=16.7
Q ss_pred CcEEEEEcCccceEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (776)
..++|||+|||+++++++
T Consensus 26 ~~~lgIDiGtts~k~~l~ 43 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVF 43 (520)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred CeEEEEEeCCcceEEEEE
Confidence 369999999999999999
No 120
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=41.71 E-value=15 Score=41.56 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=17.4
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (776)
...+||||+|||++++++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d 23 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLID 23 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEecCCcceEEEEEE
Confidence 45799999999999999993
No 121
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=41.26 E-value=17 Score=40.49 Aligned_cols=19 Identities=32% Similarity=0.382 Sum_probs=17.4
Q ss_pred CCcEEEEEcCccceEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~ 41 (776)
...++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~ 22 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVT 22 (515)
T ss_dssp SCEEEEEEECSSEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEE
Confidence 4579999999999999999
No 122
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=40.16 E-value=18 Score=40.15 Aligned_cols=20 Identities=15% Similarity=0.326 Sum_probs=17.8
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (776)
+..++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~k~~l~d 23 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFD 23 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEcCCCceEEEEEC
Confidence 45799999999999999994
No 123
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=40.05 E-value=15 Score=40.79 Aligned_cols=20 Identities=20% Similarity=0.268 Sum_probs=17.3
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (776)
+..++|||+|||++++++++
T Consensus 6 ~~~~lgIDiGtts~k~~l~d 25 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVR 25 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEecCcceEEEEEC
Confidence 35799999999999999993
No 124
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=39.57 E-value=17 Score=37.68 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=24.3
Q ss_pred eecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEEE
Q 004058 193 SLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALVY 234 (776)
Q Consensus 193 ~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 234 (776)
....-|.|.|...+... . ...+++|+||.|||+..+.
T Consensus 109 ~aaanw~ASa~~~A~~~--~---~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 109 VSASNWCGTAKWVSKNI--E---ENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp TBCCSSHHHHHHHHHHT--C---SSEEEEEECSSCEEEEEEE
T ss_pred HHhcCHHHHHHHHHHhc--C---CCEEEEEcCcchhhhhhhc
Confidence 34455666666222221 1 2479999999999999885
No 125
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=38.50 E-value=18 Score=39.98 Aligned_cols=19 Identities=21% Similarity=0.263 Sum_probs=17.0
Q ss_pred CcEEEEEcCccceEEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~~ 42 (776)
..++|||+|||++++++++
T Consensus 4 ~~~lgIDiGtT~~k~~l~d 22 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYD 22 (503)
T ss_dssp EEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEEC
Confidence 3689999999999999993
No 126
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=38.34 E-value=15 Score=40.71 Aligned_cols=17 Identities=12% Similarity=0.196 Sum_probs=16.1
Q ss_pred cEEEEEcCccceEEEEE
Q 004058 25 AVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (776)
.++|||+|||+++++++
T Consensus 3 ~~lgiDiGtT~~k~~l~ 19 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILF 19 (495)
T ss_dssp CEEEEEECSSEEEEEEE
T ss_pred EEEEEeeCCcceEEEEE
Confidence 58999999999999999
No 127
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=36.84 E-value=21 Score=36.52 Aligned_cols=64 Identities=17% Similarity=0.112 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccC--cHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHH
Q 004058 343 CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTR--VPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 343 ~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sr--iP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ 416 (776)
+..++++..+.+-..+...-. . +...|+|.||-+. .|.+.+.+++.+- .|+.+.+.||+++|..
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~--------~~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV--------APQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC--------CCSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc--------CCCCCHHHHHHHHHhh
Confidence 445566665555555554322 2 5677999998764 5677777776531 1457789999988753
No 128
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=36.22 E-value=20 Score=39.63 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=16.8
Q ss_pred CcEEEEEcCccceEEEEE
Q 004058 24 SAVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 24 ~~vvGID~GTt~s~va~~ 41 (776)
..++|||+|||+++++++
T Consensus 6 ~~~lgIDiGtts~k~~l~ 23 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILF 23 (501)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeCccceEEEEE
Confidence 379999999999999999
No 129
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=35.31 E-value=18 Score=39.89 Aligned_cols=17 Identities=24% Similarity=0.268 Sum_probs=16.2
Q ss_pred cEEEEEcCccceEEEEE
Q 004058 25 AVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (776)
.++|||+|||+++++++
T Consensus 4 ~~lgiDiGtt~~k~~l~ 20 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIF 20 (497)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEecCCchhEEEEE
Confidence 68999999999999999
No 130
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=34.82 E-value=35 Score=36.14 Aligned_cols=50 Identities=16% Similarity=0.130 Sum_probs=34.0
Q ss_pred CccEEEEecCccCcHH-HHHHHHHHhCCC---ccCCCCCcchhHHhHHHHHHHH
Q 004058 367 EIYAVELIGGGTRVPK-LQAKLQEYLGRT---ELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 367 ~i~~V~LvGG~sriP~-v~~~l~~~f~~~---~i~~~~n~deava~GAa~~aa~ 416 (776)
+++.|+|.||.+..+. +.+.|++.+... .+......+.+.++||+..+..
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHcC
Confidence 5679999999887544 778888777542 2222333345899999987643
No 131
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=34.78 E-value=38 Score=34.37 Aligned_cols=46 Identities=26% Similarity=0.174 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
...+.+...++++|+++++++++|++|++.|+++++ -+.+.+.||.
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~ 252 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNI 252 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 345567788999999999999999999999998764 3567778875
No 132
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=34.07 E-value=36 Score=34.87 Aligned_cols=46 Identities=17% Similarity=0.086 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
-....+...++++|+++++++++|++|+..|++.++ -+.+.+.|+.
T Consensus 217 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 262 (322)
T 1ub7_A 217 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGL 262 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 445677788999999999999999999999988664 4567777875
No 133
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=33.86 E-value=1e+02 Score=31.39 Aligned_cols=50 Identities=32% Similarity=0.282 Sum_probs=33.2
Q ss_pred CccEEEEecCccCc-----HHHHHHHHHHhCC------CccCCCCCcchhHHhHHHHHHHH
Q 004058 367 EIYAVELIGGGTRV-----PKLQAKLQEYLGR------TELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 367 ~i~~V~LvGG~sri-----P~v~~~l~~~f~~------~~i~~~~n~deava~GAa~~aa~ 416 (776)
+.+.|+|-||.+.. +.+++.+++.+.. .++....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 55788999988765 4577777766531 12223334577999999988753
No 134
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=33.82 E-value=52 Score=34.02 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 346 LWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 346 ~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
....+...++++|+++++++++|++|+..|++.++ -+.+.+.|+.
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 273 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGV 273 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCC
Confidence 45667788999999999999999999999988764 3467777764
No 135
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=33.25 E-value=29 Score=35.17 Aligned_cols=68 Identities=12% Similarity=-0.067 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCc--HHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHH
Q 004058 342 LCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRV--PKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 342 l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sri--P~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ 416 (776)
.+..++++..+.+-..+ ...+ ..+.+.|+|.||-++. +.+++.+++... ++ ..+..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHh
Confidence 34455555555555555 2222 1156789999998776 667777666432 22 23557899999999864
No 136
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=32.14 E-value=1.2e+02 Score=24.29 Aligned_cols=14 Identities=36% Similarity=0.275 Sum_probs=5.7
Q ss_pred HHHHHHHHHHhhhH
Q 004058 731 FQERLDVLKAIGDP 744 (776)
Q Consensus 731 ~~~k~~~L~~~~~p 744 (776)
-++++.+|+...+.
T Consensus 44 R~~~i~el~akidd 57 (101)
T 1d7m_A 44 REKRLRELEAKLDE 57 (101)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444443333
No 137
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=32.11 E-value=26 Score=38.54 Aligned_cols=16 Identities=31% Similarity=0.517 Sum_probs=15.3
Q ss_pred EEEEEcCccceEEEEE
Q 004058 26 VSSVDLGSEWLKVAVV 41 (776)
Q Consensus 26 vvGID~GTt~s~va~~ 41 (776)
++|||+|||+++++++
T Consensus 2 ~lgiDiGtt~~k~~l~ 17 (484)
T 2itm_A 2 YIGIDLGTSGVKVILL 17 (484)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEecCcccEEEEE
Confidence 6999999999999999
No 138
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=31.67 E-value=53 Score=34.98 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=37.4
Q ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHhCCceeeecchhHH-HHHHhcccc
Q 004058 161 VKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG-AALQYGIDK 209 (776)
Q Consensus 161 ~~~~VitVPa~f~~~qR~~l~~Aa~~AGl~~~~li~Ep~A-AAl~y~~~~ 209 (776)
+.++|++.|+. ...---.++-||.++|.+.+.-+--..| ||++||...
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTet 208 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTET 208 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSS
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCc
Confidence 46789999983 2122346889999999999888888888 799998864
No 139
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=31.28 E-value=57 Score=33.13 Aligned_cols=47 Identities=17% Similarity=0.042 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 344 EDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 344 ~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
+.....+...++++|+++++++++|++|++.++++++ -+.+.+.|+.
T Consensus 208 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 254 (313)
T 1zow_A 208 KFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGI 254 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 3345677788999999999999999999999998654 3456777764
No 140
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=30.50 E-value=25 Score=38.94 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=16.1
Q ss_pred cEEEEEcCccceEEEEE
Q 004058 25 AVSSVDLGSEWLKVAVV 41 (776)
Q Consensus 25 ~vvGID~GTt~s~va~~ 41 (776)
.++|||+|||+++++++
T Consensus 3 ~~lgiDiGtts~k~~l~ 19 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVF 19 (504)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEecCCcceEEEEE
Confidence 58999999999999999
No 141
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=30.05 E-value=70 Score=23.33 Aligned_cols=49 Identities=20% Similarity=0.337 Sum_probs=23.7
Q ss_pred eeEEEeeccCCCCCCCHHHHHHHHHHHHHhhHH-HHHHHHHHHHHhhhhhH
Q 004058 633 PLKIVEKTVGPGASLSKEALVDAEAKLEELDKK-DADRRRTAELKNNLEGY 682 (776)
Q Consensus 633 ~i~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~-D~~~~~~~~akN~LEs~ 682 (776)
++.|..++.|.. ..+..++++++....+++.+ +....+..+.+..|+.|
T Consensus 3 AlefIk~~LG~~-~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~~ 52 (53)
T 2yy0_A 3 ALDFLKHHLGAA-TPENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQY 52 (53)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHcCCC-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 345544444422 24678899998888777654 44445555666666543
No 142
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=29.27 E-value=56 Score=33.61 Aligned_cols=46 Identities=17% Similarity=0.193 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
-..+.+...++++|+++++++++|++|++.+++.++ -+.+.+.|+.
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 266 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDL 266 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 345667788999999999999999999999998764 3457777764
No 143
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=28.67 E-value=33 Score=27.85 Aligned_cols=28 Identities=25% Similarity=0.419 Sum_probs=25.7
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHhCCce
Q 004058 164 FVISVPPYFGQAERKGLMQAAELAGMNV 191 (776)
Q Consensus 164 ~VitVPa~f~~~qR~~l~~Aa~~AGl~~ 191 (776)
-.++.|+.++..+|..+...|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4789999999999999999999999864
No 144
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=27.14 E-value=88 Score=32.74 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=17.9
Q ss_pred CCcEEEEEcCccceEEEEEE
Q 004058 23 QSAVSSVDLGSEWLKVAVVN 42 (776)
Q Consensus 23 ~~~vvGID~GTt~s~va~~~ 42 (776)
++.+||||+|.|++.+++++
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d 47 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVR 47 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEe
Confidence 46799999999999999984
No 145
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=25.62 E-value=1.7e+02 Score=31.97 Aligned_cols=23 Identities=26% Similarity=0.385 Sum_probs=20.3
Q ss_pred CCcEEEEEEecCccceeeEEEEe
Q 004058 214 ESRHVVFYDMGATTTYAALVYFS 236 (776)
Q Consensus 214 ~~~~vlV~D~GggT~dvsv~~~~ 236 (776)
+...+|.+|+||.++-+.++++.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~ 100 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLG 100 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEEC
Confidence 44689999999999999999875
No 146
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=25.47 E-value=40 Score=33.79 Aligned_cols=72 Identities=19% Similarity=0.241 Sum_probs=39.0
Q ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCccEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHH
Q 004058 333 SITRQKFEELCEDLWERSLVPLREVLNYSGLK--MDEIYAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGA 410 (776)
Q Consensus 333 ~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~--~~~i~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GA 410 (776)
.+-++..+.+-.-++......|+..+++.... ...--.|+++||.+..-. .. . .....+|+ -+-.|.
T Consensus 181 ~~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~l~------~~-~---~~~~~~~~-LvL~GL 249 (266)
T 3djc_A 181 VVGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASLFD------KQ-G---LYDHLVPD-LVLQGI 249 (266)
T ss_dssp SCBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGGGT------TT-T---CCSEECTT-HHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHHhc------cC-C---CCCEECcC-hHHHHH
Confidence 34566666666666666666666655543211 111236999999876421 11 1 11123444 678888
Q ss_pred HHHHH
Q 004058 411 SLLAA 415 (776)
Q Consensus 411 a~~aa 415 (776)
.+...
T Consensus 250 ~~i~~ 254 (266)
T 3djc_A 250 RLAAM 254 (266)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 147
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=24.80 E-value=1.2e+02 Score=30.68 Aligned_cols=50 Identities=14% Similarity=0.115 Sum_probs=32.0
Q ss_pred CccEEEEecCccCcH----HHHHHHHHHhCC------------CccCCCCCcchhHHhHHHHHHHH
Q 004058 367 EIYAVELIGGGTRVP----KLQAKLQEYLGR------------TELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 367 ~i~~V~LvGG~sriP----~v~~~l~~~f~~------------~~i~~~~n~deava~GAa~~aa~ 416 (776)
+++.|+|-||.++.+ .+++.+.+.... ..+....-.+.+.++|||.++..
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~ 289 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQ 289 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHH
Confidence 556789989887754 555566655421 01333444577999999988753
No 148
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=24.45 E-value=2.2e+02 Score=30.85 Aligned_cols=24 Identities=13% Similarity=0.158 Sum_probs=20.2
Q ss_pred CCCcEEEEEEecCccceeeEEEEe
Q 004058 213 NESRHVVFYDMGATTTYAALVYFS 236 (776)
Q Consensus 213 ~~~~~vlV~D~GggT~dvsv~~~~ 236 (776)
.+...++.+|+||.++-+.++...
T Consensus 58 ~E~G~~laiDlGGTnirv~lV~~~ 81 (457)
T 2yhx_A 58 AQAGSFLAIVMGGGDLEVILISLA 81 (457)
T ss_dssp CCCEEEEEEEECSSEEEEEEEEEE
T ss_pred CccceEEEEEeCCCeEEEEEEEeC
Confidence 345678999999999999999764
No 149
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=24.06 E-value=1.3e+02 Score=34.12 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=46.6
Q ss_pred EEEeeHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHH-HHhC
Q 004058 331 RSSITRQKFEELCEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQ-EYLG 392 (776)
Q Consensus 331 ~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~-~~f~ 392 (776)
.+.||..+++++... -.-+..-++-.|+.++++.++|+.|+|.||++.-=-+.+++. -+++
T Consensus 499 ~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP 560 (631)
T 3zyy_X 499 DIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLP 560 (631)
T ss_dssp CEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSC
T ss_pred cEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCC
Confidence 469999999986543 223555667788899999999999999999988777777665 3344
No 150
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=23.10 E-value=1.1e+02 Score=31.39 Aligned_cols=48 Identities=15% Similarity=-0.021 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 343 CEDLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 343 ~~~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
++...+.+...++++|++++++.++|+++++..++.+ +-+.+.+.++-
T Consensus 229 ~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl 276 (333)
T 4dfe_A 229 FKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGL 276 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCC
Confidence 3455667778899999999999999999999988865 44677777764
No 151
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=22.48 E-value=81 Score=33.34 Aligned_cols=46 Identities=20% Similarity=0.279 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
...+.+...++++|+++++++++|+++++.+++.++ -+.+.+.++-
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl 329 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGI 329 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCC
Confidence 445667788899999999999999999999988664 4556677764
No 152
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=22.34 E-value=89 Score=31.98 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 345 DLWERSLVPLREVLNYSGLKMDEIYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 345 ~~~~~i~~~i~~~l~~a~~~~~~i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
.....+...++++|+++++++++|+.+++.++++++ -+.+.+.||.
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~ 274 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCC
Confidence 345677788999999999999999999999988764 3446666764
No 153
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=21.96 E-value=73 Score=32.89 Aligned_cols=48 Identities=31% Similarity=0.331 Sum_probs=36.5
Q ss_pred cEEEEecCccCcHHHHHHHHHHhCCCccCCCCCcchhHHhHHHHHHHHhcC
Q 004058 369 YAVELIGGGTRVPKLQAKLQEYLGRTELDRHLDADEAIVLGASLLAANLSD 419 (776)
Q Consensus 369 ~~V~LvGG~sriP~v~~~l~~~f~~~~i~~~~n~deava~GAa~~aa~ls~ 419 (776)
..|.|+|........+..|.. +|. . ....++|+++..|....+..+.+
T Consensus 260 ~~V~LiG~~~L~~~Y~~AL~~-~G~-~-~~~~d~d~a~~~GL~~~a~~~~~ 307 (330)
T 3t69_A 260 DGVCLVGSGGLGTLYRTALES-QGL-N-VRAVDADEAVRAGLSAAARAIWP 307 (330)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-TTC-E-EEEEEHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCC-C-ceeeCHHHHHHHHHHHHHHHHHH
Confidence 569999999999988888875 664 2 23557899999998866665543
No 154
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=21.92 E-value=44 Score=33.96 Aligned_cols=55 Identities=11% Similarity=0.018 Sum_probs=33.4
Q ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHh--CCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCcc
Q 004058 162 KDFVISVPPYFGQAERKGLMQAAELA--GMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATT 227 (776)
Q Consensus 162 ~~~VitVPa~f~~~qR~~l~~Aa~~A--Gl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT 227 (776)
..+.|++|..-+......+.. .. ++ .+.+.|+..||+++-. . ....+++=+|-|.
T Consensus 77 ~~igig~pG~v~~~~~~~l~~---~~~~~~-pv~v~NDa~aaa~ge~--~-----~~~~v~v~~GTGi 133 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGEFES---QAPGFA-RLSLATDGYTTLLGAH--G-----GQPGIIVALGTGS 133 (305)
T ss_dssp EEEEEEESCCCTTSHHHHHHH---TCCCCS-EEEEECHHHHHHHHHT--T-----TSSEEEEEESSSE
T ss_pred ceEEEEecCCCchHHHHHHHH---hCCCCc-eEEEECCHHHHHHhhc--C-----CCCeEEEEecCCe
Confidence 457889998876544332221 12 34 3689999999988631 1 1235556677776
No 155
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=21.84 E-value=7.9e+02 Score=26.69 Aligned_cols=19 Identities=5% Similarity=-0.004 Sum_probs=10.2
Q ss_pred HHHHhhhhhHHHHHHhhcc
Q 004058 673 AELKNNLEGYIYATKEKFE 691 (776)
Q Consensus 673 ~~akN~LEs~iy~~r~~l~ 691 (776)
....++.++|+..+.+.|.
T Consensus 77 sKnsKdseqy~k~~~E~Lr 95 (562)
T 3ghg_A 77 QKNNKDSHSLTTNIMEILR 95 (562)
T ss_dssp HHHHHHHHHHHHHHHHTTS
T ss_pred HhhchhHHHHHHHHHHHHH
Confidence 4445555555555555554
No 156
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=21.82 E-value=48 Score=37.58 Aligned_cols=26 Identities=19% Similarity=0.483 Sum_probs=22.5
Q ss_pred ccEEEEecCccCcHHHHHHHHHHhCC
Q 004058 368 IYAVELIGGGTRVPKLQAKLQEYLGR 393 (776)
Q Consensus 368 i~~V~LvGG~sriP~v~~~l~~~f~~ 393 (776)
.+.|++|||+|.+|.+.-.|.+.++-
T Consensus 501 y~nilivGggski~g~~~~L~dri~i 526 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRINI 526 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHHh
Confidence 46799999999999999999887753
No 157
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=20.87 E-value=1.2e+02 Score=32.07 Aligned_cols=50 Identities=8% Similarity=0.106 Sum_probs=30.7
Q ss_pred CccEEEEecCccC-cHHHHHHHHHHhCC---------CccCCCCCcchhHHhHHHHHHHH
Q 004058 367 EIYAVELIGGGTR-VPKLQAKLQEYLGR---------TELDRHLDADEAIVLGASLLAAN 416 (776)
Q Consensus 367 ~i~~V~LvGG~sr-iP~v~~~l~~~f~~---------~~i~~~~n~deava~GAa~~aa~ 416 (776)
+.+.|+|.||.+. .|.+.+.+++.+.. .++......+.+.++|||+....
T Consensus 334 dP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~~ 393 (406)
T 1z6r_A 334 NPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDA 393 (406)
T ss_dssp CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHHH
T ss_pred CCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHHH
Confidence 3467888888876 36665655544321 13333334567899999876543
No 158
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=20.77 E-value=65 Score=34.35 Aligned_cols=45 Identities=29% Similarity=0.480 Sum_probs=37.0
Q ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHhCCceeeecchhHH-HHHHhcccc
Q 004058 161 VKDFVISVPPYFGQAERKGLMQAAELAGMNVLSLVNEHSG-AALQYGIDK 209 (776)
Q Consensus 161 ~~~~VitVPa~f~~~qR~~l~~Aa~~AGl~~~~li~Ep~A-AAl~y~~~~ 209 (776)
+.++|++.|+.-+ -.++-||.++|.+.+.-+--..| ||++||.+.
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTet 199 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTES 199 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSS
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCCC
Confidence 5689999998333 35789999999999989998888 799999753
No 159
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=20.46 E-value=2.5e+02 Score=28.68 Aligned_cols=44 Identities=14% Similarity=0.033 Sum_probs=28.3
Q ss_pred hCCceeeecchhHHHHHHhccccCCCCCCcEEEEEEecCccceeeEE
Q 004058 187 AGMNVLSLVNEHSGAALQYGIDKDFSNESRHVVFYDMGATTTYAALV 233 (776)
Q Consensus 187 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~vlV~D~GggT~dvsv~ 233 (776)
.|++ +.+.|+..|||++-..... ....+.++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~-~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQ-GKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTST-TTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCC-CCCCCcEEEEEECCC-EEEEEE
Confidence 4777 5799999999987433211 112356788888877 445555
Done!