Query 004067
Match_columns 776
No_of_seqs 429 out of 4396
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 13:11:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004067.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004067hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 3.7E-76 1.3E-80 686.8 68.3 684 38-776 2-725 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 1.2E-70 4.1E-75 643.7 71.6 705 38-776 20-739 (741)
3 1xfd_A DIP, dipeptidyl aminope 100.0 4.2E-69 1.4E-73 629.0 64.9 685 38-776 2-721 (723)
4 1z68_A Fibroblast activation p 100.0 1.9E-67 6.5E-72 614.1 60.0 676 40-776 3-718 (719)
5 2z3z_A Dipeptidyl aminopeptida 100.0 1.1E-64 3.7E-69 589.7 74.0 667 57-776 28-706 (706)
6 3azo_A Aminopeptidase; POP fam 100.0 3.8E-51 1.3E-55 472.0 58.6 570 124-776 23-648 (662)
7 2xdw_A Prolyl endopeptidase; a 100.0 3.1E-51 1.1E-55 475.0 57.8 578 63-776 80-704 (710)
8 3o4h_A Acylamino-acid-releasin 100.0 1.5E-52 5E-57 475.6 45.1 534 124-776 21-579 (582)
9 2bkl_A Prolyl endopeptidase; m 100.0 2.2E-50 7.5E-55 466.3 54.5 573 61-776 74-675 (695)
10 1yr2_A Prolyl oligopeptidase; 100.0 4.1E-50 1.4E-54 467.2 53.4 572 60-776 112-717 (741)
11 3iuj_A Prolyl endopeptidase; h 100.0 1.2E-48 4E-53 450.4 56.7 523 172-776 131-684 (693)
12 2xe4_A Oligopeptidase B; hydro 100.0 7.2E-47 2.4E-51 437.4 53.8 520 172-776 176-741 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 7.9E-37 2.7E-41 343.8 44.4 522 177-776 137-706 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 3.7E-26 1.3E-30 244.8 26.7 299 58-447 39-382 (388)
15 4a5s_A Dipeptidyl peptidase 4 99.9 2.3E-24 7.9E-29 250.6 29.7 296 58-447 65-447 (740)
16 3pe7_A Oligogalacturonate lyas 99.9 7.2E-24 2.5E-28 227.0 29.6 344 81-500 11-385 (388)
17 3f67_A Putative dienelactone h 99.9 6.7E-24 2.3E-28 210.7 23.1 223 523-775 5-241 (241)
18 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-23 5.7E-28 225.5 27.7 324 57-476 65-409 (415)
19 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-22 4.2E-27 218.7 32.2 260 64-425 141-409 (415)
20 2wtm_A EST1E; hydrolase; 1.60A 99.9 2.3E-23 8E-28 208.2 22.4 230 526-776 3-249 (251)
21 4ao6_A Esterase; hydrolase, th 99.9 3.3E-23 1.1E-27 207.5 21.5 206 532-776 38-258 (259)
22 2i3d_A AGR_C_3351P, hypothetic 99.9 2.3E-22 7.7E-27 200.7 24.8 211 523-776 20-233 (249)
23 3c5m_A Oligogalacturonate lyas 99.9 9E-23 3.1E-27 219.0 23.1 293 57-448 38-383 (396)
24 4fbl_A LIPS lipolytic enzyme; 99.9 5.2E-23 1.8E-27 209.2 19.8 206 553-775 50-281 (281)
25 3ksr_A Putative serine hydrola 99.9 2.3E-23 7.8E-28 213.3 16.0 227 524-776 6-241 (290)
26 1k32_A Tricorn protease; prote 99.9 8.8E-22 3E-26 237.8 32.5 381 57-508 17-469 (1045)
27 3c5m_A Oligogalacturonate lyas 99.9 5E-22 1.7E-26 213.2 27.0 306 127-502 38-387 (396)
28 1zi8_A Carboxymethylenebutenol 99.9 5.4E-23 1.9E-27 203.4 17.7 211 525-776 4-232 (236)
29 1xfd_A DIP, dipeptidyl aminope 99.9 2.3E-22 7.9E-27 234.1 25.7 291 57-434 63-430 (723)
30 3k2i_A Acyl-coenzyme A thioest 99.9 4.6E-22 1.6E-26 214.6 25.9 219 536-776 144-411 (422)
31 3hxk_A Sugar hydrolase; alpha- 99.9 2.7E-22 9.3E-27 203.7 22.7 231 527-775 17-265 (276)
32 1k32_A Tricorn protease; prote 99.9 6.3E-21 2.1E-25 230.4 38.0 336 57-502 206-603 (1045)
33 3azo_A Aminopeptidase; POP fam 99.9 2E-21 6.8E-26 223.6 31.7 321 39-448 12-368 (662)
34 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 1.2E-22 4.1E-27 216.8 19.9 229 522-776 125-364 (386)
35 2ecf_A Dipeptidyl peptidase IV 99.9 1.3E-21 4.4E-26 228.4 30.3 289 57-447 111-457 (741)
36 3pfb_A Cinnamoyl esterase; alp 99.9 4.9E-22 1.7E-26 201.0 21.7 232 521-775 19-267 (270)
37 3hlk_A Acyl-coenzyme A thioest 99.9 6.2E-22 2.1E-26 214.5 23.6 219 536-776 160-427 (446)
38 2o2g_A Dienelactone hydrolase; 99.9 6E-22 2.1E-26 193.9 21.2 212 523-776 11-222 (223)
39 3bjr_A Putative carboxylestera 99.9 3.4E-22 1.2E-26 203.8 19.1 237 521-775 16-282 (283)
40 1z68_A Fibroblast activation p 99.9 2.5E-22 8.7E-27 233.4 20.3 298 57-447 62-441 (719)
41 3bxp_A Putative lipase/esteras 99.9 1.2E-21 4.2E-26 198.9 22.7 231 524-775 4-270 (277)
42 3doh_A Esterase; alpha-beta hy 99.9 1.9E-21 6.5E-26 206.7 23.8 224 523-775 143-378 (380)
43 2z3z_A Dipeptidyl aminopeptida 99.9 1.4E-20 4.8E-25 218.3 33.1 292 56-447 83-433 (706)
44 1vlq_A Acetyl xylan esterase; 99.9 4.5E-22 1.5E-26 208.5 18.0 237 521-776 65-334 (337)
45 2gop_A Trilobed protease; beta 99.9 9.6E-21 3.3E-25 199.2 28.1 311 39-508 4-338 (347)
46 3trd_A Alpha/beta hydrolase; c 99.9 4.3E-21 1.5E-25 185.7 22.8 203 523-772 5-207 (208)
47 3ebl_A Gibberellin receptor GI 99.9 3.5E-21 1.2E-25 202.6 22.4 238 520-776 60-351 (365)
48 3ga7_A Acetyl esterase; phosph 99.9 2.5E-21 8.7E-26 201.4 21.0 229 523-776 62-322 (326)
49 3fcy_A Xylan esterase 1; alpha 99.9 1.3E-21 4.5E-26 205.6 18.6 233 522-775 80-344 (346)
50 2fuk_A XC6422 protein; A/B hyd 99.9 9.7E-21 3.3E-25 184.9 23.1 209 522-776 8-216 (220)
51 3fak_A Esterase/lipase, ESTE5; 99.9 2.6E-21 8.8E-26 200.5 19.4 216 536-776 66-308 (322)
52 1l7a_A Cephalosporin C deacety 99.9 6.3E-21 2.1E-25 197.9 21.1 233 523-776 55-316 (318)
53 3o4h_A Acylamino-acid-releasin 99.9 1.3E-20 4.3E-25 213.2 25.4 270 58-447 25-313 (582)
54 2hdw_A Hypothetical protein PA 99.9 6.3E-21 2.2E-25 202.4 20.9 237 523-776 67-367 (367)
55 3fcx_A FGH, esterase D, S-form 99.9 1.2E-21 4.1E-26 199.6 14.5 241 524-776 16-280 (282)
56 1mpx_A Alpha-amino acid ester 99.9 4.6E-21 1.6E-25 215.3 20.6 244 524-776 25-354 (615)
57 1lzl_A Heroin esterase; alpha/ 99.9 8.6E-21 2.9E-25 197.2 21.1 233 523-776 50-316 (323)
58 2o7r_A CXE carboxylesterase; a 99.9 2.4E-21 8.1E-26 202.9 16.6 237 523-776 54-331 (338)
59 4e15_A Kynurenine formamidase; 99.9 1.7E-21 5.7E-26 200.6 14.8 225 526-773 58-298 (303)
60 2c7b_A Carboxylesterase, ESTE1 99.9 7.2E-21 2.5E-25 196.8 19.4 231 521-776 45-308 (311)
61 3hju_A Monoglyceride lipase; a 99.9 1.4E-20 4.6E-25 197.7 21.6 233 524-775 34-311 (342)
62 1gxr_A ESG1, transducin-like e 99.9 4.6E-19 1.6E-23 185.2 33.1 319 56-497 11-335 (337)
63 1jfr_A Lipase; serine hydrolas 99.9 1.3E-20 4.3E-25 189.6 20.2 201 523-776 24-231 (262)
64 3h04_A Uncharacterized protein 99.9 4.1E-20 1.4E-24 186.9 23.6 225 524-776 3-273 (275)
65 2b9v_A Alpha-amino acid ester 99.9 1.5E-20 5.2E-25 211.6 22.1 245 524-776 37-366 (652)
66 2hm7_A Carboxylesterase; alpha 99.9 3.5E-21 1.2E-25 199.0 15.6 232 521-776 45-309 (310)
67 2ymu_A WD-40 repeat protein; u 99.9 1.3E-18 4.4E-23 196.7 37.6 310 57-496 265-577 (577)
68 2wir_A Pesta, alpha/beta hydro 99.9 6E-21 2E-25 197.5 16.7 232 520-776 47-311 (313)
69 2ojh_A Uncharacterized protein 99.9 1.4E-19 4.6E-24 185.2 26.6 256 80-436 21-294 (297)
70 3i6y_A Esterase APC40077; lipa 99.9 1.2E-20 4E-25 192.0 18.2 242 523-776 16-278 (280)
71 3pe6_A Monoglyceride lipase; a 99.9 5.9E-20 2E-24 188.6 23.6 230 528-776 21-294 (303)
72 3e4d_A Esterase D; S-formylglu 99.9 6.8E-21 2.3E-25 193.5 16.3 241 524-776 15-277 (278)
73 2ymu_A WD-40 repeat protein; u 99.8 2.9E-18 1E-22 193.7 39.2 319 57-506 224-545 (577)
74 3ain_A 303AA long hypothetical 99.8 2.8E-20 9.5E-25 192.6 20.4 230 522-776 63-320 (323)
75 3llc_A Putative hydrolase; str 99.8 1.2E-20 4.2E-25 190.4 17.4 229 525-775 12-269 (270)
76 3vis_A Esterase; alpha/beta-hy 99.8 1.3E-20 4.3E-25 194.0 17.7 190 532-776 79-275 (306)
77 3fnb_A Acylaminoacyl peptidase 99.8 1.5E-20 5E-25 201.7 18.8 233 522-776 133-401 (405)
78 3bdi_A Uncharacterized protein 99.8 1.7E-19 6E-24 174.0 24.6 197 524-774 4-206 (207)
79 4h0c_A Phospholipase/carboxyle 99.8 1.5E-20 5.1E-25 180.8 16.6 188 552-774 20-210 (210)
80 3ls2_A S-formylglutathione hyd 99.8 1.6E-20 5.5E-25 191.0 17.6 242 523-776 14-278 (280)
81 2zsh_A Probable gibberellin re 99.8 5.1E-20 1.8E-24 193.6 21.3 234 523-775 71-351 (351)
82 3qh4_A Esterase LIPW; structur 99.8 2.2E-20 7.4E-25 193.1 18.0 229 521-776 57-315 (317)
83 2pbl_A Putative esterase/lipas 99.8 3.8E-20 1.3E-24 186.2 18.9 217 524-772 38-260 (262)
84 1tht_A Thioesterase; 2.10A {Vi 99.8 6.4E-20 2.2E-24 187.9 20.6 213 524-756 7-244 (305)
85 1jkm_A Brefeldin A esterase; s 99.8 4.9E-20 1.7E-24 194.2 20.2 233 524-775 82-357 (361)
86 3rm3_A MGLP, thermostable mono 99.8 1.4E-19 4.6E-24 183.0 21.8 205 553-775 39-268 (270)
87 4f0j_A Probable hydrolytic enz 99.8 1.5E-19 5.1E-24 186.9 22.5 232 523-775 19-314 (315)
88 1jjf_A Xylanase Z, endo-1,4-be 99.8 2E-19 6.8E-24 181.5 22.6 220 521-775 29-260 (268)
89 1a88_A Chloroperoxidase L; hal 99.8 2.4E-19 8.3E-24 181.7 22.5 218 529-774 3-275 (275)
90 3dkr_A Esterase D; alpha beta 99.8 2.8E-20 9.5E-25 185.4 15.2 206 553-775 21-248 (251)
91 1ufo_A Hypothetical protein TT 99.8 5.9E-20 2E-24 181.5 17.3 215 532-775 10-234 (238)
92 2ojh_A Uncharacterized protein 99.8 2.5E-18 8.5E-23 175.8 29.5 262 147-486 21-293 (297)
93 1fj2_A Protein (acyl protein t 99.8 1.7E-19 5.9E-24 177.6 19.8 194 541-776 14-228 (232)
94 3ia2_A Arylesterase; alpha-bet 99.8 5.9E-20 2E-24 185.8 16.8 216 528-773 2-270 (271)
95 1lns_A X-prolyl dipeptidyl ami 99.8 1.4E-19 4.8E-24 206.6 21.4 235 530-776 179-521 (763)
96 4b6g_A Putative esterase; hydr 99.8 5.9E-20 2E-24 187.1 16.4 240 524-776 22-282 (283)
97 1zoi_A Esterase; alpha/beta hy 99.8 2.2E-19 7.4E-24 182.2 20.5 217 529-773 4-275 (276)
98 3k6k_A Esterase/lipase; alpha/ 99.8 1.8E-19 6.2E-24 186.8 20.3 216 533-776 66-308 (322)
99 2uz0_A Esterase, tributyrin es 99.8 9.3E-20 3.2E-24 183.4 17.6 237 523-776 6-256 (263)
100 1k8q_A Triacylglycerol lipase, 99.8 1.1E-19 3.7E-24 193.5 18.5 250 516-775 20-377 (377)
101 4fhz_A Phospholipase/carboxyle 99.8 1.4E-19 4.7E-24 181.8 17.6 189 552-776 64-266 (285)
102 1auo_A Carboxylesterase; hydro 99.8 5.9E-19 2E-23 171.9 21.5 184 552-776 12-217 (218)
103 3og9_A Protein YAHD A copper i 99.8 2.6E-19 8.8E-24 173.2 18.7 181 552-775 15-208 (209)
104 1jji_A Carboxylesterase; alpha 99.8 1.4E-19 4.9E-24 186.6 17.7 225 523-774 55-310 (311)
105 1a8s_A Chloroperoxidase F; hal 99.8 5E-19 1.7E-23 179.2 20.9 215 529-773 3-272 (273)
106 1l0q_A Surface layer protein; 99.8 3.8E-17 1.3E-21 174.7 36.5 258 81-445 12-273 (391)
107 3om8_A Probable hydrolase; str 99.8 2.2E-19 7.7E-24 180.8 17.5 215 528-773 8-265 (266)
108 3mve_A FRSA, UPF0255 protein V 99.8 9.8E-20 3.4E-24 194.7 15.6 229 522-776 166-413 (415)
109 2ocg_A Valacyclovir hydrolase; 99.8 6.6E-19 2.3E-23 176.1 20.3 213 533-772 10-253 (254)
110 1a8q_A Bromoperoxidase A1; hal 99.8 1.4E-18 4.8E-23 175.9 22.7 215 529-773 3-273 (274)
111 3cn9_A Carboxylesterase; alpha 99.8 2.1E-18 7.3E-23 169.0 23.2 183 552-776 22-226 (226)
112 3bws_A Protein LP49; two-domai 99.8 1.2E-16 4E-21 173.5 38.7 333 58-498 64-431 (433)
113 1nr0_A Actin interacting prote 99.8 2.9E-17 1E-21 186.4 34.8 373 57-501 106-569 (611)
114 3d0k_A Putative poly(3-hydroxy 99.8 1.2E-18 4E-23 179.3 21.2 219 526-774 26-286 (304)
115 1vkh_A Putative serine hydrola 99.8 2.9E-19 1E-23 180.8 16.2 204 552-772 39-272 (273)
116 1tqh_A Carboxylesterase precur 99.8 3.5E-19 1.2E-23 177.2 16.3 203 555-775 17-245 (247)
117 3fob_A Bromoperoxidase; struct 99.8 1.2E-18 4.1E-23 177.2 20.2 214 530-773 12-280 (281)
118 2yys_A Proline iminopeptidase- 99.8 8.6E-19 3E-23 178.6 18.8 220 526-775 4-276 (286)
119 1imj_A CIB, CCG1-interacting f 99.8 2.7E-19 9.2E-24 173.2 14.2 193 533-775 15-209 (210)
120 1brt_A Bromoperoxidase A2; hal 99.8 1.1E-18 3.8E-23 176.9 19.3 213 531-774 9-277 (277)
121 3nwo_A PIP, proline iminopepti 99.8 1.1E-18 3.9E-23 181.6 19.6 228 525-775 29-322 (330)
122 2h1i_A Carboxylesterase; struc 99.8 1.3E-18 4.4E-23 170.6 18.6 185 552-776 36-226 (226)
123 1mtz_A Proline iminopeptidase; 99.8 1.3E-18 4.4E-23 178.2 19.1 216 533-776 13-293 (293)
124 1q0r_A RDMC, aclacinomycin met 99.8 2.1E-18 7.2E-23 177.0 20.7 214 532-775 8-293 (298)
125 3kxp_A Alpha-(N-acetylaminomet 99.8 1E-18 3.5E-23 180.9 18.4 218 524-774 48-314 (314)
126 1nr0_A Actin interacting prote 99.8 3.8E-17 1.3E-21 185.5 33.0 316 57-504 21-360 (611)
127 3vgz_A Uncharacterized protein 99.8 1.4E-16 4.8E-21 167.6 34.9 277 55-434 41-334 (353)
128 2r11_A Carboxylesterase NP; 26 99.8 2.3E-18 8E-23 177.4 20.6 221 524-774 45-306 (306)
129 2xua_A PCAD, 3-oxoadipate ENOL 99.8 8E-19 2.7E-23 176.8 16.2 214 532-774 9-264 (266)
130 3d7r_A Esterase; alpha/beta fo 99.8 1E-18 3.5E-23 181.5 17.4 212 537-776 84-322 (326)
131 2qjw_A Uncharacterized protein 99.8 2.1E-18 7.2E-23 161.7 17.7 174 552-774 2-175 (176)
132 1qlw_A Esterase; anisotropic r 99.8 3E-18 1E-22 177.9 20.6 204 536-776 49-321 (328)
133 3oos_A Alpha/beta hydrolase fa 99.8 2.2E-18 7.5E-23 174.5 18.9 217 525-772 4-278 (278)
134 3r0v_A Alpha/beta hydrolase fo 99.8 4.8E-18 1.6E-22 170.5 20.8 209 528-774 6-262 (262)
135 3i1i_A Homoserine O-acetyltran 99.8 1.3E-18 4.4E-23 185.1 17.5 245 525-776 13-373 (377)
136 3dqz_A Alpha-hydroxynitrIle ly 99.8 2E-18 7E-23 172.8 18.0 202 555-776 5-258 (258)
137 3b5e_A MLL8374 protein; NP_108 99.8 8.1E-19 2.8E-23 171.6 14.6 198 533-775 14-216 (223)
138 3v48_A Aminohydrolase, putativ 99.8 1.2E-18 4.1E-23 175.7 16.0 201 553-775 14-260 (268)
139 3u0v_A Lysophospholipase-like 99.8 8.2E-18 2.8E-22 166.4 21.8 202 537-776 11-231 (239)
140 3qit_A CURM TE, polyketide syn 99.8 2.9E-18 9.8E-23 174.2 18.8 216 524-768 4-283 (286)
141 2fx5_A Lipase; alpha-beta hydr 99.8 3.1E-18 1.1E-22 171.6 18.3 185 539-776 34-228 (258)
142 3bwx_A Alpha/beta hydrolase; Y 99.8 1.5E-17 5.1E-22 169.5 23.6 225 521-774 2-284 (285)
143 3vdx_A Designed 16NM tetrahedr 99.8 3.8E-18 1.3E-22 185.2 20.4 220 525-775 4-279 (456)
144 1b6g_A Haloalkane dehalogenase 99.8 3.3E-18 1.1E-22 176.3 18.5 215 535-775 34-309 (310)
145 2r8b_A AGR_C_4453P, uncharacte 99.8 2.3E-18 8E-23 171.8 16.8 184 552-776 60-248 (251)
146 3iii_A COCE/NOND family hydrol 99.8 1.3E-18 4.4E-23 190.7 16.1 243 516-776 33-320 (560)
147 2gop_A Trilobed protease; beta 99.8 1.8E-17 6E-22 174.2 24.1 238 57-412 61-340 (347)
148 2pl5_A Homoserine O-acetyltran 99.8 7.3E-18 2.5E-22 178.6 21.3 232 533-775 29-365 (366)
149 1gxr_A ESG1, transducin-like e 99.8 2.1E-16 7.3E-21 164.8 32.2 279 56-446 53-336 (337)
150 2y6u_A Peroxisomal membrane pr 99.8 9E-19 3.1E-23 187.9 14.4 234 527-775 23-344 (398)
151 3u1t_A DMMA haloalkane dehalog 99.8 2.5E-18 8.5E-23 177.1 16.6 217 527-775 12-296 (309)
152 3g8y_A SUSD/RAGB-associated es 99.8 1.3E-18 4.5E-23 185.0 14.5 218 523-749 86-341 (391)
153 4ery_A WD repeat-containing pr 99.8 4.5E-16 1.5E-20 160.7 33.2 281 57-446 26-311 (312)
154 1l0q_A Surface layer protein; 99.8 3E-16 1E-20 167.8 32.7 272 146-507 10-283 (391)
155 1wm1_A Proline iminopeptidase; 99.8 1.9E-17 6.5E-22 171.5 22.6 223 524-773 14-316 (317)
156 2xt0_A Haloalkane dehalogenase 99.8 1E-17 3.4E-22 171.6 20.2 212 535-773 33-296 (297)
157 3sty_A Methylketone synthase 1 99.8 3.3E-18 1.1E-22 172.3 16.3 204 552-775 10-266 (267)
158 1hkh_A Gamma lactamase; hydrol 99.8 4.3E-18 1.5E-22 172.8 17.2 210 532-773 10-278 (279)
159 1r5m_A SIR4-interacting protei 99.8 3.1E-16 1E-20 169.4 32.5 344 57-498 48-424 (425)
160 4gqb_B Methylosome protein 50; 99.8 2.8E-16 9.5E-21 164.1 30.9 243 125-447 83-331 (344)
161 3ow8_A WD repeat-containing pr 99.8 2.3E-16 7.7E-21 163.5 30.0 278 57-446 35-320 (321)
162 4dnp_A DAD2; alpha/beta hydrol 99.8 7.7E-19 2.6E-23 176.9 11.0 205 553-775 19-269 (269)
163 1c4x_A BPHD, protein (2-hydrox 99.8 1.4E-17 4.8E-22 169.6 19.3 218 530-774 12-284 (285)
164 3i2k_A Cocaine esterase; alpha 99.8 5.4E-18 1.8E-22 188.8 17.5 235 523-776 8-322 (587)
165 4g56_B MGC81050 protein; prote 99.8 1.4E-16 4.8E-21 167.8 27.4 291 57-447 45-343 (357)
166 1sfr_A Antigen 85-A; alpha/bet 99.8 1.5E-17 5.3E-22 170.5 19.4 241 522-776 7-283 (304)
167 3s25_A Hypothetical 7-bladed b 99.8 6.3E-17 2.1E-21 163.6 23.4 255 61-452 20-294 (302)
168 4ezi_A Uncharacterized protein 99.8 1.1E-17 3.8E-22 174.6 18.2 242 523-775 42-369 (377)
169 2puj_A 2-hydroxy-6-OXO-6-pheny 99.8 1.4E-17 4.9E-22 169.6 18.5 209 535-774 23-285 (286)
170 3qvm_A OLEI00960; structural g 99.8 2.3E-18 7.8E-23 174.7 12.4 202 555-775 29-278 (282)
171 4g9e_A AHL-lactonase, alpha/be 99.8 2.2E-18 7.6E-23 174.6 12.3 224 524-775 3-269 (279)
172 3fsg_A Alpha/beta superfamily 99.8 6.7E-18 2.3E-22 170.3 15.7 212 533-775 9-268 (272)
173 2j04_A TAU60, YPL007P, hypothe 99.8 1.2E-17 4.1E-22 178.9 18.2 301 55-485 16-351 (588)
174 3e0x_A Lipase-esterase related 99.8 4.1E-18 1.4E-22 168.9 13.7 207 534-772 2-245 (245)
175 3bf7_A Esterase YBFF; thioeste 99.8 2.2E-18 7.5E-23 172.4 11.8 198 554-775 16-255 (255)
176 2cjp_A Epoxide hydrolase; HET: 99.8 2.1E-17 7.3E-22 172.1 19.5 230 523-774 10-327 (328)
177 3nuz_A Putative acetyl xylan e 99.8 5.7E-18 2E-22 180.4 15.1 220 523-749 91-346 (398)
178 3g9x_A Haloalkane dehalogenase 99.8 6.9E-18 2.3E-22 173.0 15.1 219 525-774 11-292 (299)
179 1azw_A Proline iminopeptidase; 99.8 4.5E-17 1.6E-21 168.3 21.3 220 524-774 11-311 (313)
180 2wue_A 2-hydroxy-6-OXO-6-pheny 99.8 1.9E-17 6.6E-22 169.0 18.3 214 532-774 20-289 (291)
181 3hss_A Putative bromoperoxidas 99.8 1.2E-17 4.1E-22 170.8 16.7 212 533-775 31-291 (293)
182 2qru_A Uncharacterized protein 99.7 1.4E-16 4.8E-21 160.9 24.2 221 528-775 8-274 (274)
183 1j1i_A META cleavage compound 99.7 2.7E-17 9.3E-22 168.4 19.1 213 532-775 23-282 (296)
184 3bws_A Protein LP49; two-domai 99.7 1.3E-15 4.3E-20 165.3 33.3 291 57-446 125-431 (433)
185 2qm0_A BES; alpha-beta structu 99.7 1.6E-17 5.5E-22 167.7 16.8 233 518-772 12-272 (275)
186 2b61_A Homoserine O-acetyltran 99.7 2.5E-17 8.7E-22 175.2 19.1 233 533-775 42-377 (377)
187 4fle_A Esterase; structural ge 99.7 2.5E-18 8.6E-23 165.2 9.8 183 555-773 3-190 (202)
188 3zwl_B Eukaryotic translation 99.7 2.3E-15 8E-20 159.0 33.7 289 57-447 35-346 (369)
189 3vl1_A 26S proteasome regulato 99.7 3.8E-16 1.3E-20 168.6 28.1 331 57-498 59-418 (420)
190 2qs9_A Retinoblastoma-binding 99.7 5.2E-17 1.8E-21 154.8 18.7 182 553-775 3-185 (194)
191 1r88_A MPT51/MPB51 antigen; AL 99.7 5.6E-17 1.9E-21 164.0 19.9 231 522-773 9-270 (280)
192 2e3j_A Epoxide hydrolase EPHB; 99.7 4.4E-17 1.5E-21 171.7 19.8 122 532-673 10-131 (356)
193 3d59_A Platelet-activating fac 99.7 1.3E-17 4.6E-22 177.2 16.0 203 535-776 82-350 (383)
194 4f21_A Carboxylesterase/phosph 99.7 5.3E-17 1.8E-21 159.6 19.0 212 524-776 15-244 (246)
195 3i28_A Epoxide hydrolase 2; ar 99.7 1.1E-17 3.8E-22 188.0 16.1 225 522-775 235-545 (555)
196 1wom_A RSBQ, sigma factor SIGB 99.7 9.2E-18 3.1E-22 169.6 13.9 203 555-776 21-271 (271)
197 2xmz_A Hydrolase, alpha/beta h 99.7 1.2E-17 4.3E-22 168.4 14.7 198 555-775 17-266 (269)
198 1iup_A META-cleavage product h 99.7 2.8E-17 9.4E-22 167.0 17.2 213 533-774 13-272 (282)
199 2wfl_A Polyneuridine-aldehyde 99.7 4.5E-17 1.5E-21 163.7 18.3 201 553-773 9-263 (264)
200 1u2e_A 2-hydroxy-6-ketonona-2, 99.7 4.2E-17 1.4E-21 166.5 18.4 213 535-774 25-288 (289)
201 1erj_A Transcriptional repress 99.7 3.8E-15 1.3E-19 159.1 34.0 300 57-447 67-389 (393)
202 3p2m_A Possible hydrolase; alp 99.7 8.3E-18 2.9E-22 175.3 12.8 209 534-774 69-329 (330)
203 1xkl_A SABP2, salicylic acid-b 99.7 8E-17 2.8E-21 162.6 19.6 202 554-775 4-259 (273)
204 2pm9_A Protein WEB1, protein t 99.7 3.6E-17 1.2E-21 176.4 18.0 297 57-447 15-337 (416)
205 3r40_A Fluoroacetate dehalogen 99.7 3.8E-17 1.3E-21 168.0 17.0 225 523-775 12-303 (306)
206 3vgz_A Uncharacterized protein 99.7 2.2E-15 7.4E-20 158.4 30.8 280 126-485 42-334 (353)
207 1ehy_A Protein (soluble epoxid 99.7 6.9E-17 2.4E-21 165.2 18.4 213 532-772 16-293 (294)
208 3afi_E Haloalkane dehalogenase 99.7 3.1E-17 1.1E-21 169.6 15.9 213 533-775 15-301 (316)
209 3kda_A CFTR inhibitory factor 99.7 3.3E-17 1.1E-21 168.1 15.8 216 524-774 10-293 (301)
210 1got_B GT-beta; complex (GTP-b 99.7 3.2E-15 1.1E-19 156.3 31.0 276 57-443 58-339 (340)
211 1nir_A Nitrite reductase; hemo 99.7 3.1E-15 1.1E-19 165.9 32.4 346 61-507 144-522 (543)
212 2xdw_A Prolyl endopeptidase; a 99.7 3.8E-15 1.3E-19 172.2 34.0 256 57-409 127-423 (710)
213 4gqb_B Methylosome protein 50; 99.7 3.5E-16 1.2E-20 163.4 22.9 287 126-500 32-332 (344)
214 3mkq_A Coatomer beta'-subunit; 99.7 3E-15 1E-19 176.5 33.7 264 57-431 16-288 (814)
215 1gkl_A Endo-1,4-beta-xylanase 99.7 8.5E-17 2.9E-21 163.9 17.4 206 521-755 38-272 (297)
216 3s25_A Hypothetical 7-bladed b 99.7 1E-15 3.6E-20 154.7 25.1 262 132-507 21-300 (302)
217 4h5i_A Guanine nucleotide-exch 99.7 5.2E-15 1.8E-19 156.2 31.6 292 54-447 14-343 (365)
218 3c6x_A Hydroxynitrilase; atomi 99.7 1.1E-16 3.7E-21 160.1 16.9 201 555-775 4-256 (257)
219 3u4y_A Uncharacterized protein 99.7 3.2E-15 1.1E-19 155.7 28.7 279 60-445 3-302 (331)
220 3zwl_B Eukaryotic translation 99.7 1.6E-14 5.6E-19 152.5 34.1 297 125-501 33-348 (369)
221 2vat_A Acetyl-COA--deacetylcep 99.7 3.8E-17 1.3E-21 177.6 14.0 228 534-776 93-443 (444)
222 1vyh_C Platelet-activating fac 99.7 9.4E-15 3.2E-19 157.0 32.4 274 57-445 111-409 (410)
223 3ow8_A WD repeat-containing pr 99.7 1.3E-14 4.6E-19 150.1 32.5 279 125-497 33-319 (321)
224 2ynn_A Coatomer subunit beta'; 99.7 1.5E-14 5E-19 148.7 32.1 269 57-434 16-292 (304)
225 2bkl_A Prolyl endopeptidase; m 99.7 2.6E-15 9.1E-20 173.0 29.2 248 126-448 122-396 (695)
226 3fm0_A Protein CIAO1; WDR39,SG 99.7 4.9E-15 1.7E-19 155.2 28.6 282 57-447 19-335 (345)
227 2qvb_A Haloalkane dehalogenase 99.7 4.2E-17 1.4E-21 166.9 12.5 214 532-775 15-292 (297)
228 3ibt_A 1H-3-hydroxy-4-oxoquino 99.7 5.6E-17 1.9E-21 162.9 13.1 211 533-773 7-263 (264)
229 1uxo_A YDEN protein; hydrolase 99.7 5.6E-16 1.9E-20 147.3 19.1 181 554-774 4-189 (192)
230 3vl1_A 26S proteasome regulato 99.7 1.2E-14 3.9E-19 157.0 31.6 291 59-445 102-417 (420)
231 4g56_B MGC81050 protein; prote 99.7 3.4E-16 1.2E-20 164.7 18.9 283 125-500 43-344 (357)
232 2rau_A Putative esterase; NP_3 99.7 2.8E-17 9.6E-22 173.2 10.5 213 553-775 49-353 (354)
233 1pby_B Quinohemoprotein amine 99.7 3.6E-15 1.2E-19 155.5 26.3 263 57-404 36-312 (337)
234 2pbi_B Guanine nucleotide-bind 99.7 2.2E-14 7.4E-19 150.8 32.1 276 57-443 67-353 (354)
235 3u4y_A Uncharacterized protein 99.7 5.6E-15 1.9E-19 153.8 27.4 251 59-410 44-312 (331)
236 1r5m_A SIR4-interacting protei 99.7 5.8E-15 2E-19 159.3 27.5 275 56-446 110-424 (425)
237 1m33_A BIOH protein; alpha-bet 99.7 1.1E-16 3.8E-21 160.3 12.9 191 556-774 15-255 (258)
238 2qmq_A Protein NDRG2, protein 99.7 1.7E-16 5.6E-21 161.7 14.4 221 533-773 19-285 (286)
239 2ynn_A Coatomer subunit beta'; 99.7 2.1E-14 7.2E-19 147.5 30.1 280 125-497 14-300 (304)
240 3h2g_A Esterase; xanthomonas o 99.7 1.9E-16 6.5E-21 169.1 15.1 151 524-675 46-211 (397)
241 1r3d_A Conserved hypothetical 99.7 4.9E-16 1.7E-20 156.1 17.2 195 554-775 16-262 (264)
242 1dqz_A 85C, protein (antigen 8 99.7 6.8E-16 2.3E-20 156.4 18.3 235 523-775 5-277 (280)
243 1mj5_A 1,3,4,6-tetrachloro-1,4 99.7 1.3E-16 4.4E-21 163.8 13.0 215 531-775 15-293 (302)
244 3sfz_A APAF-1, apoptotic pepti 99.7 3.1E-15 1.1E-19 184.9 27.5 340 57-505 801-1164(1249)
245 1vyh_C Platelet-activating fac 99.7 2.8E-14 9.7E-19 153.2 31.5 284 125-497 109-409 (410)
246 3sfz_A APAF-1, apoptotic pepti 99.7 1.1E-13 3.7E-18 171.1 39.9 341 57-507 618-1000(1249)
247 2psd_A Renilla-luciferin 2-mon 99.7 6.8E-16 2.3E-20 159.6 16.7 212 533-775 29-305 (318)
248 4h5i_A Guanine nucleotide-exch 99.7 3.6E-15 1.2E-19 157.4 22.5 201 58-348 137-343 (365)
249 1k8k_C P40, ARP2/3 complex 41 99.7 3.5E-14 1.2E-18 150.3 30.3 204 56-356 10-241 (372)
250 1yr2_A Prolyl oligopeptidase; 99.7 7E-15 2.4E-19 170.6 26.7 247 126-448 164-440 (741)
251 1pja_A Palmitoyl-protein thioe 99.7 2.8E-16 9.5E-21 161.5 12.9 197 553-772 35-301 (302)
252 1isp_A Lipase; alpha/beta hydr 99.7 1.5E-15 5.1E-20 142.8 16.6 168 554-774 3-175 (181)
253 2q0x_A Protein DUF1749, unchar 99.7 1.3E-15 4.3E-20 158.3 17.6 208 535-775 24-294 (335)
254 3frx_A Guanine nucleotide-bind 99.7 1.2E-13 4.1E-18 142.8 32.5 274 57-447 20-317 (319)
255 3ei3_B DNA damage-binding prot 99.7 1.8E-14 6E-19 153.5 26.9 286 57-446 76-381 (383)
256 1erj_A Transcriptional repress 99.7 8.3E-14 2.8E-18 148.7 31.9 276 125-497 65-387 (393)
257 3i2n_A WD repeat-containing pr 99.7 9.2E-15 3.2E-19 153.8 24.0 288 57-446 21-352 (357)
258 3iuj_A Prolyl endopeptidase; h 99.7 8.5E-15 2.9E-19 168.2 25.4 292 61-448 83-404 (693)
259 1pby_B Quinohemoprotein amine 99.7 5E-14 1.7E-18 146.8 29.1 283 146-506 9-317 (337)
260 2wj6_A 1H-3-hydroxy-4-oxoquina 99.7 3.8E-16 1.3E-20 157.8 12.3 216 532-774 11-271 (276)
261 3fm0_A Protein CIAO1; WDR39,SG 99.7 1.1E-13 3.8E-18 144.9 31.6 289 126-502 18-338 (345)
262 3fla_A RIFR; alpha-beta hydrol 99.7 7.5E-16 2.6E-20 154.9 14.2 200 552-775 18-249 (267)
263 1got_B GT-beta; complex (GTP-b 99.7 8.1E-14 2.8E-18 145.6 30.1 268 125-484 56-332 (340)
264 2xzm_R RACK1; ribosome, transl 99.6 1.7E-13 5.7E-18 143.4 31.8 276 57-447 24-340 (343)
265 3c8d_A Enterochelin esterase; 99.6 6E-16 2.1E-20 164.2 13.1 224 521-775 165-397 (403)
266 1ycd_A Hypothetical 27.3 kDa p 99.6 8.1E-16 2.8E-20 152.4 13.1 204 553-775 4-237 (243)
267 3i2n_A WD repeat-containing pr 99.6 4.8E-14 1.6E-18 148.2 27.5 294 125-501 19-355 (357)
268 2pbi_B Guanine nucleotide-bind 99.6 2.2E-13 7.6E-18 143.1 32.1 273 125-495 65-353 (354)
269 4aez_A CDC20, WD repeat-contai 99.6 2.4E-13 8E-18 145.7 32.7 286 127-505 96-386 (401)
270 4ery_A WD repeat-containing pr 99.6 1.5E-13 5.1E-18 141.7 30.1 281 125-497 24-310 (312)
271 3dw8_B Serine/threonine-protei 99.6 3.9E-14 1.4E-18 154.1 27.1 276 57-407 31-378 (447)
272 3frx_A Guanine nucleotide-bind 99.6 2.2E-13 7.5E-18 140.9 31.0 276 125-499 18-317 (319)
273 3bdv_A Uncharacterized protein 99.6 8.1E-15 2.8E-19 139.1 18.0 170 553-775 16-187 (191)
274 2vdu_B TRNA (guanine-N(7)-)-me 99.6 1.2E-13 4.1E-18 150.5 29.8 289 126-501 6-395 (450)
275 1pgu_A Actin interacting prote 99.6 7E-13 2.4E-17 150.7 37.1 205 57-352 67-287 (615)
276 1ri6_A Putative isomerase YBHE 99.6 1.6E-13 5.4E-18 143.4 29.2 259 56-409 39-317 (343)
277 2vdu_B TRNA (guanine-N(7)-)-me 99.6 2.1E-13 7.3E-18 148.5 31.0 162 126-356 104-279 (450)
278 3iz6_a 40S ribosomal protein R 99.6 1E-13 3.5E-18 147.3 27.6 287 57-446 69-374 (380)
279 3hfq_A Uncharacterized protein 99.6 1.6E-13 5.4E-18 143.9 28.8 270 55-409 40-326 (347)
280 3mkq_A Coatomer beta'-subunit; 99.6 1.4E-13 4.9E-18 162.1 31.5 282 125-499 14-302 (814)
281 2gzs_A IROE protein; enterobac 99.6 1.7E-15 5.9E-20 152.6 12.7 227 519-774 8-264 (278)
282 1sq9_A Antiviral protein SKI8; 99.6 4.2E-13 1.4E-17 143.4 31.6 286 57-446 19-394 (397)
283 3b12_A Fluoroacetate dehalogen 99.4 3.8E-17 1.3E-21 167.8 0.0 216 533-775 13-292 (304)
284 3l80_A Putative uncharacterize 99.6 1.2E-15 4.1E-20 155.8 11.2 218 522-775 19-289 (292)
285 1ri6_A Putative isomerase YBHE 99.6 2.7E-13 9.1E-18 141.6 28.8 245 126-447 39-308 (343)
286 2oaj_A Protein SNI1; WD40 repe 99.6 1.7E-12 5.8E-17 153.0 38.4 158 56-248 60-232 (902)
287 2pm9_A Protein WEB1, protein t 99.6 3.9E-14 1.3E-18 152.6 22.4 251 56-404 69-339 (416)
288 3scy_A Hypothetical bacterial 99.6 9.3E-13 3.2E-17 138.8 32.6 264 56-409 51-346 (361)
289 3ei3_B DNA damage-binding prot 99.6 2.5E-13 8.6E-18 144.5 27.7 279 125-498 74-381 (383)
290 4gga_A P55CDC, cell division c 99.6 7.7E-13 2.6E-17 142.6 31.4 283 127-502 108-398 (420)
291 3qyj_A ALR0039 protein; alpha/ 99.6 2.6E-14 8.8E-19 145.6 18.6 223 524-774 5-290 (291)
292 4i19_A Epoxide hydrolase; stru 99.6 7.1E-14 2.4E-18 147.7 22.6 222 525-774 69-384 (388)
293 3hfq_A Uncharacterized protein 99.6 4.7E-13 1.6E-17 140.3 28.6 280 150-502 20-322 (347)
294 4aow_A Guanine nucleotide-bind 99.6 2.4E-12 8.3E-17 134.1 34.0 278 57-447 41-337 (340)
295 2xzm_R RACK1; ribosome, transl 99.6 1.6E-12 5.6E-17 135.8 32.1 284 126-500 23-341 (343)
296 3c5v_A PME-1, protein phosphat 99.6 4.6E-14 1.6E-18 145.8 19.2 198 555-775 39-300 (316)
297 3guu_A Lipase A; protein struc 99.6 6.1E-14 2.1E-18 148.1 20.0 238 523-776 74-406 (462)
298 3dm0_A Maltose-binding peripla 99.6 6E-13 2.1E-17 153.5 29.7 277 57-446 385-692 (694)
299 3qmv_A Thioesterase, REDJ; alp 99.6 2.8E-16 9.5E-21 159.5 1.3 196 554-771 51-279 (280)
300 3dwl_C Actin-related protein 2 99.6 1.2E-13 4E-18 146.7 21.6 203 56-351 13-239 (377)
301 2xe4_A Oligopeptidase B; hydro 99.6 3.8E-13 1.3E-17 155.4 27.5 259 57-410 176-466 (751)
302 4aez_A CDC20, WD repeat-contai 99.6 1.5E-12 5E-17 139.5 29.8 276 58-446 97-379 (401)
303 1yfq_A Cell cycle arrest prote 99.6 5.2E-13 1.8E-17 139.5 25.1 262 57-433 14-312 (342)
304 4e54_B DNA damage-binding prot 99.6 1.7E-13 6E-18 148.4 22.1 288 57-446 122-429 (435)
305 3k26_A Polycomb protein EED; W 99.6 6.6E-13 2.3E-17 140.0 25.6 291 57-446 21-365 (366)
306 2oaj_A Protein SNI1; WD40 repe 99.6 3.5E-12 1.2E-16 150.3 34.1 213 57-352 20-246 (902)
307 1k8k_C P40, ARP2/3 complex 41 99.5 1.8E-12 6.2E-17 137.0 28.8 242 125-447 9-274 (372)
308 4a11_B DNA excision repair pro 99.5 1.3E-12 4.4E-17 140.0 27.6 303 57-447 46-365 (408)
309 4gga_A P55CDC, cell division c 99.5 5.1E-12 1.7E-16 136.2 32.1 282 58-446 109-394 (420)
310 4ggc_A P55CDC, cell division c 99.5 2E-12 7E-17 133.3 27.8 279 128-499 29-315 (318)
311 2j04_A TAU60, YPL007P, hypothe 99.5 5.1E-14 1.7E-18 150.9 15.7 244 57-432 88-349 (588)
312 2aq5_A Coronin-1A; WD40 repeat 99.5 1.8E-12 6.2E-17 138.9 27.7 284 129-501 39-344 (402)
313 1jmx_B Amine dehydrogenase; ox 99.5 2.3E-12 8E-17 134.8 27.7 262 58-404 3-327 (349)
314 2j04_B YDR362CP, TAU91; beta p 99.5 6.3E-13 2.2E-17 146.1 24.0 323 55-497 134-515 (524)
315 4ggc_A P55CDC, cell division c 99.5 9.9E-12 3.4E-16 128.1 31.2 282 58-446 29-314 (318)
316 3iz6_a 40S ribosomal protein R 99.5 2.8E-12 9.6E-17 136.1 27.4 292 125-501 67-377 (380)
317 3gff_A IROE-like serine hydrol 99.5 1.1E-13 3.7E-18 141.8 15.8 206 522-755 10-249 (331)
318 3k26_A Polycomb protein EED; W 99.5 4.8E-13 1.6E-17 141.0 21.4 297 125-498 19-365 (366)
319 3dw8_B Serine/threonine-protei 99.5 1.4E-12 4.8E-17 141.8 25.3 296 125-497 29-444 (447)
320 3v7d_B Cell division control p 99.5 1.1E-11 3.6E-16 135.7 32.3 327 61-497 127-463 (464)
321 4aow_A Guanine nucleotide-bind 99.5 2E-11 7E-16 127.1 32.9 281 125-501 39-339 (340)
322 2hes_X YDR267CP; beta-propelle 99.5 2.7E-12 9.2E-17 133.3 25.9 280 57-446 17-327 (330)
323 1pgu_A Actin interacting prote 99.5 3.3E-12 1.1E-16 145.1 28.7 288 125-506 19-335 (615)
324 3dm0_A Maltose-binding peripla 99.5 7.6E-12 2.6E-16 144.3 30.9 278 125-497 383-691 (694)
325 2hes_X YDR267CP; beta-propelle 99.5 2.2E-11 7.4E-16 126.4 30.4 282 125-498 15-327 (330)
326 4fol_A FGH, S-formylglutathion 99.5 3.5E-13 1.2E-17 135.6 15.8 244 523-776 13-296 (299)
327 3vu4_A KMHSV2; beta-propeller 99.5 9.4E-12 3.2E-16 130.6 27.6 268 56-447 21-336 (355)
328 1sq9_A Antiviral protein SKI8; 99.5 6.5E-12 2.2E-16 134.1 26.6 224 57-356 65-330 (397)
329 2aq5_A Coronin-1A; WD40 repeat 99.5 2.3E-12 7.9E-17 138.0 23.0 281 58-447 38-342 (402)
330 3scy_A Hypothetical bacterial 99.5 9.4E-12 3.2E-16 131.1 27.4 296 58-448 5-338 (361)
331 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.1E-11 3.6E-16 130.9 27.7 219 56-354 41-298 (365)
332 1qks_A Cytochrome CD1 nitrite 99.5 1E-10 3.6E-15 129.1 36.6 356 57-507 156-546 (567)
333 3dwl_C Actin-related protein 2 99.5 4.1E-13 1.4E-17 142.4 16.4 235 125-446 12-280 (377)
334 1nir_A Nitrite reductase; hemo 99.5 5E-11 1.7E-15 132.1 33.7 298 130-503 143-462 (543)
335 3g02_A Epoxide hydrolase; alph 99.5 3.2E-13 1.1E-17 143.0 14.9 224 524-775 85-396 (408)
336 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.2E-11 4.1E-16 130.4 27.0 258 126-447 41-341 (365)
337 3gre_A Serine/threonine-protei 99.5 1.1E-11 3.7E-16 134.4 27.3 251 56-405 65-362 (437)
338 1yfq_A Cell cycle arrest prote 99.5 4.2E-12 1.4E-16 132.5 22.8 260 125-485 12-313 (342)
339 3odt_A Protein DOA1; ubiquitin 99.5 4.3E-11 1.5E-15 122.9 29.4 267 57-446 21-295 (313)
340 1jmx_B Amine dehydrogenase; ox 99.4 6E-12 2.1E-16 131.6 22.4 124 56-206 44-182 (349)
341 3jrp_A Fusion protein of prote 99.4 1.1E-11 3.8E-16 131.2 23.9 202 57-350 14-242 (379)
342 2mad_H Methylamine dehydrogena 99.4 3.8E-10 1.3E-14 118.4 34.6 292 138-505 31-356 (373)
343 2pm7_B Protein transport prote 99.4 3.9E-11 1.3E-15 122.4 26.3 199 57-350 12-240 (297)
344 3fle_A SE_1780 protein; struct 99.4 2.5E-12 8.5E-17 125.8 16.5 208 554-772 6-247 (249)
345 3ds8_A LIN2722 protein; unkonw 99.4 4.4E-13 1.5E-17 133.1 11.2 208 555-775 4-242 (254)
346 1qe3_A PNB esterase, para-nitr 99.4 1.2E-13 4.3E-18 149.7 7.6 210 537-757 83-316 (489)
347 2ovr_B FBW7, F-BOX/WD repeat p 99.4 2.9E-10 1E-14 123.4 34.4 308 60-499 123-442 (445)
348 3mmy_A MRNA export factor; mRN 99.4 4.1E-11 1.4E-15 126.1 26.3 271 125-485 40-336 (368)
349 3lcr_A Tautomycetin biosynthet 99.4 9.7E-13 3.3E-17 135.4 12.6 199 553-775 80-302 (319)
350 3jrp_A Fusion protein of prote 99.4 3.7E-11 1.3E-15 127.1 25.1 243 125-447 12-287 (379)
351 4e54_B DNA damage-binding prot 99.4 7E-12 2.4E-16 135.7 19.8 256 56-406 166-434 (435)
352 3pic_A CIP2; alpha/beta hydrol 99.4 9.9E-12 3.4E-16 124.7 18.6 214 535-776 90-345 (375)
353 3mmy_A MRNA export factor; mRN 99.4 8.5E-11 2.9E-15 123.7 26.9 267 56-434 41-336 (368)
354 3f3f_A Nucleoporin SEH1; struc 99.4 1E-10 3.6E-15 121.8 26.8 213 57-352 14-253 (351)
355 3odt_A Protein DOA1; ubiquitin 99.4 1.3E-10 4.3E-15 119.3 26.9 274 125-502 19-299 (313)
356 3sjl_D Methylamine dehydrogena 99.4 2.4E-10 8.1E-15 118.2 28.4 283 138-507 43-371 (386)
357 3v7d_B Cell division control p 99.4 7.5E-10 2.6E-14 120.8 34.2 275 57-447 165-463 (464)
358 2pm7_B Protein transport prote 99.4 1.9E-10 6.5E-15 117.3 27.2 242 125-447 10-285 (297)
359 2j04_B YDR362CP, TAU91; beta p 99.4 1.1E-11 3.8E-16 136.2 18.6 285 57-447 210-517 (524)
360 2xyi_A Probable histone-bindin 99.4 3.7E-10 1.2E-14 121.9 30.2 243 125-446 129-409 (430)
361 2dg1_A DRP35, lactonase; beta 99.4 2.1E-10 7E-15 119.2 26.9 254 126-448 46-315 (333)
362 3bg1_A Protein SEC13 homolog; 99.4 4.5E-11 1.5E-15 123.2 21.5 254 57-400 16-291 (316)
363 3gre_A Serine/threonine-protei 99.4 7.8E-11 2.7E-15 127.6 24.3 219 125-404 64-294 (437)
364 1kez_A Erythronolide synthase; 99.3 7E-13 2.4E-17 135.6 7.3 199 552-775 65-281 (300)
365 4g4g_A 4-O-methyl-glucuronoyl 99.3 2.6E-11 8.9E-16 122.8 18.4 213 535-776 123-379 (433)
366 2k2q_B Surfactin synthetase th 99.3 1.4E-12 4.7E-17 128.9 9.1 195 553-775 12-237 (242)
367 3lp5_A Putative cell surface h 99.3 9.8E-12 3.4E-16 121.5 14.5 198 555-774 5-233 (250)
368 3ils_A PKS, aflatoxin biosynth 99.3 2.1E-12 7.2E-17 129.3 10.0 197 553-772 20-264 (265)
369 4a11_B DNA excision repair pro 99.3 1.7E-10 5.8E-15 123.4 25.6 295 125-504 44-370 (408)
370 3f3f_A Nucleoporin SEH1; struc 99.3 2.5E-10 8.5E-15 118.9 25.7 305 125-506 12-344 (351)
371 2d81_A PHB depolymerase; alpha 99.3 2.9E-12 9.9E-17 129.5 8.4 142 632-774 5-174 (318)
372 2oiz_A Aromatic amine dehydrog 99.3 5.5E-10 1.9E-14 117.1 25.6 112 64-203 13-144 (361)
373 3e5z_A Putative gluconolactona 99.3 9E-10 3.1E-14 112.2 26.4 248 127-448 30-285 (296)
374 2mad_H Methylamine dehydrogena 99.3 1.3E-08 4.4E-13 106.7 35.7 289 61-448 27-349 (373)
375 3jro_A Fusion protein of prote 99.3 7.5E-11 2.6E-15 136.8 19.9 247 57-403 12-286 (753)
376 1gpl_A RP2 lipase; serine este 99.3 3.2E-12 1.1E-16 136.4 7.5 163 553-755 69-236 (432)
377 3lrv_A PRE-mRNA-splicing facto 99.3 6.2E-10 2.1E-14 116.1 24.1 202 60-351 42-247 (343)
378 3e5z_A Putative gluconolactona 99.3 8.6E-10 3E-14 112.3 24.4 234 57-406 30-290 (296)
379 2dg1_A DRP35, lactonase; beta 99.2 2.7E-09 9.1E-14 110.7 27.6 208 57-354 47-269 (333)
380 3vu4_A KMHSV2; beta-propeller 99.2 1.1E-09 3.8E-14 114.8 24.8 270 124-498 19-335 (355)
381 2ghs_A AGR_C_1268P; regucalcin 99.2 3E-09 1E-13 109.9 27.2 244 128-447 52-314 (326)
382 1tca_A Lipase; hydrolase(carbo 99.2 8.7E-11 3E-15 119.9 15.3 209 536-774 15-243 (317)
383 3bg1_A Protein SEC13 homolog; 99.2 2.3E-10 7.8E-15 117.9 18.4 245 124-447 13-293 (316)
384 2xyi_A Probable histone-bindin 99.2 1.1E-09 3.7E-14 118.2 24.5 196 56-348 130-353 (430)
385 3c75_H MADH, methylamine dehyd 99.2 5.3E-09 1.8E-13 110.2 28.7 290 138-506 83-409 (426)
386 3sjl_D Methylamine dehydrogena 99.2 5E-09 1.7E-13 108.3 27.9 306 62-475 40-384 (386)
387 3g4e_A Regucalcin; six bladed 99.2 8.8E-09 3E-13 104.8 28.5 239 128-435 16-263 (297)
388 3dr2_A Exported gluconolactona 99.2 2.8E-09 9.7E-14 109.0 24.5 253 127-447 47-304 (305)
389 2oiz_A Aromatic amine dehydrog 99.2 2.2E-08 7.5E-13 104.9 31.3 290 138-506 14-343 (361)
390 1ei9_A Palmitoyl protein thioe 99.2 1.7E-10 5.9E-15 115.5 14.1 105 555-671 6-114 (279)
391 2ghs_A AGR_C_1268P; regucalcin 99.2 1.4E-08 4.6E-13 104.9 27.2 199 57-354 51-266 (326)
392 2w18_A PALB2, fancn, partner a 99.1 4.7E-09 1.6E-13 105.6 22.4 224 126-445 113-355 (356)
393 3jro_A Fusion protein of prote 99.1 3.7E-10 1.3E-14 131.0 16.3 244 124-447 9-285 (753)
394 3g4e_A Regucalcin; six bladed 99.1 2.7E-08 9.3E-13 101.2 27.5 202 57-355 15-236 (297)
395 1qks_A Cytochrome CD1 nitrite 99.1 2.1E-07 7E-12 102.8 35.0 295 54-448 196-537 (567)
396 3c75_H MADH, methylamine dehyd 99.1 7E-08 2.4E-12 101.6 29.0 304 63-476 81-424 (426)
397 3lrv_A PRE-mRNA-splicing facto 99.1 8.8E-09 3E-13 107.3 21.1 146 57-247 128-280 (343)
398 1p22_A F-BOX/WD-repeat protein 99.0 2.8E-08 9.7E-13 107.3 25.1 263 60-447 137-414 (435)
399 1ukc_A ESTA, esterase; fungi, 99.0 9.7E-10 3.3E-14 120.1 13.5 210 537-756 86-327 (522)
400 1bu8_A Protein (pancreatic lip 99.0 3.7E-10 1.3E-14 120.7 9.2 112 552-673 68-181 (452)
401 2cb9_A Fengycin synthetase; th 99.0 4E-10 1.4E-14 111.0 8.2 184 554-774 22-224 (244)
402 2ovr_B FBW7, F-BOX/WD repeat p 99.0 4E-07 1.4E-11 98.5 32.6 267 131-506 124-398 (445)
403 3icv_A Lipase B, CALB; circula 99.0 2.1E-09 7.1E-14 107.4 13.1 153 553-728 64-228 (316)
404 4gq1_A NUP37; propeller, trans 99.0 1.9E-08 6.6E-13 106.9 20.7 246 131-445 96-387 (393)
405 1w52_X Pancreatic lipase relat 99.0 6.2E-10 2.1E-14 119.0 9.0 112 552-673 68-181 (452)
406 3dsm_A Uncharacterized protein 99.0 3.5E-07 1.2E-11 94.3 29.6 233 138-447 52-300 (328)
407 3dr2_A Exported gluconolactona 99.0 4E-08 1.4E-12 100.4 22.0 204 57-355 47-274 (305)
408 2ogt_A Thermostable carboxyles 99.0 1E-09 3.4E-14 119.3 10.2 130 537-674 85-224 (498)
409 3dsm_A Uncharacterized protein 99.0 1E-07 3.4E-12 98.4 25.0 252 54-409 43-309 (328)
410 1jmk_C SRFTE, surfactin synthe 99.0 2.1E-10 7E-15 112.1 4.2 185 554-774 17-228 (230)
411 1p22_A F-BOX/WD-repeat protein 99.0 2.5E-07 8.5E-12 99.8 28.3 273 131-501 138-416 (435)
412 2h7c_A Liver carboxylesterase 99.0 6.6E-10 2.3E-14 122.1 7.5 126 537-674 99-233 (542)
413 3s94_A LRP-6, low-density lipo 98.9 5.8E-06 2E-10 92.4 39.4 371 55-506 127-516 (619)
414 1ys1_X Lipase; CIS peptide Leu 98.9 3.5E-09 1.2E-13 107.9 11.6 109 552-673 6-114 (320)
415 2hfk_A Pikromycin, type I poly 98.9 1.4E-09 4.8E-14 112.0 7.6 197 556-775 91-311 (319)
416 4gq1_A NUP37; propeller, trans 98.9 6.1E-08 2.1E-12 103.0 20.5 114 57-202 139-289 (393)
417 1ex9_A Lactonizing lipase; alp 98.9 3.1E-09 1E-13 107.0 9.2 105 552-673 5-109 (285)
418 3tej_A Enterobactin synthase c 98.9 2.3E-09 7.8E-14 110.8 8.2 195 554-773 101-328 (329)
419 1llf_A Lipase 3; candida cylin 98.9 2.6E-09 8.9E-14 116.9 9.0 133 537-672 98-243 (534)
420 2x5x_A PHB depolymerase PHAZ7; 98.9 2.4E-09 8.3E-14 109.3 7.7 114 554-673 40-165 (342)
421 1mda_H Methylamine dehydrogena 98.9 5.5E-08 1.9E-12 100.7 17.8 272 149-507 47-354 (368)
422 1hpl_A Lipase; hydrolase(carbo 98.9 3.8E-09 1.3E-13 112.1 9.2 113 552-673 67-180 (449)
423 3hrp_A Uncharacterized protein 98.9 8.9E-07 3E-11 94.1 27.7 219 56-357 132-363 (409)
424 3n2z_B Lysosomal Pro-X carboxy 98.9 6.3E-09 2.2E-13 110.0 10.7 114 554-671 39-159 (446)
425 1thg_A Lipase; hydrolase(carbo 98.9 3.5E-09 1.2E-13 116.1 9.0 131 537-672 106-251 (544)
426 1npe_A Nidogen, entactin; glyc 98.8 6E-07 2.1E-11 89.5 23.6 236 66-409 1-246 (267)
427 1rp1_A Pancreatic lipase relat 98.8 5.9E-09 2E-13 110.7 9.1 111 553-673 69-180 (450)
428 2ha2_A ACHE, acetylcholinester 98.8 1E-08 3.6E-13 112.6 10.9 126 537-673 97-232 (543)
429 1q7f_A NHL, brain tumor CG1071 98.8 9.7E-07 3.3E-11 89.0 24.6 210 57-356 32-246 (286)
430 2w18_A PALB2, fancn, partner a 98.8 9.3E-07 3.2E-11 89.0 23.5 281 127-497 42-355 (356)
431 3fvz_A Peptidyl-glycine alpha- 98.8 2.5E-06 8.4E-11 88.0 27.8 220 57-355 26-284 (329)
432 4a0p_A LRP6, LRP-6, low-densit 98.8 3E-05 1E-09 86.6 38.2 141 57-246 39-184 (628)
433 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.4E-06 4.7E-11 89.1 25.5 210 56-351 19-259 (314)
434 2zyr_A Lipase, putative; fatty 98.8 4.4E-09 1.5E-13 110.8 6.6 113 553-674 21-167 (484)
435 2oit_A Nucleoporin 214KDA; NH2 98.8 5.4E-07 1.8E-11 96.7 22.9 166 126-349 94-279 (434)
436 1p0i_A Cholinesterase; serine 98.8 1.8E-08 6E-13 110.5 11.3 125 537-673 93-227 (529)
437 2fj0_A JuvenIle hormone estera 98.8 9.6E-09 3.3E-13 113.0 8.4 124 537-672 91-232 (551)
438 1ea5_A ACHE, acetylcholinester 98.8 1.8E-08 6.2E-13 110.4 10.5 124 537-673 95-229 (537)
439 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.7E-06 5.8E-11 88.4 24.4 256 126-448 19-298 (314)
440 3v65_B Low-density lipoprotein 98.7 2.6E-06 9E-11 89.7 25.8 225 81-408 96-325 (386)
441 3v64_C Agrin; beta propeller, 98.7 5.5E-06 1.9E-10 85.9 27.6 225 81-408 53-282 (349)
442 2z2n_A Virginiamycin B lyase; 98.7 2.2E-05 7.4E-10 79.3 30.4 272 56-447 16-293 (299)
443 2dst_A Hypothetical protein TT 98.7 7.4E-08 2.5E-12 84.2 10.0 95 532-661 9-103 (131)
444 2bce_A Cholesterol esterase; h 98.7 2.9E-08 9.8E-13 109.3 8.6 130 537-672 81-222 (579)
445 1dx4_A ACHE, acetylcholinester 98.7 5.1E-08 1.7E-12 108.0 10.5 118 552-673 139-267 (585)
446 3no2_A Uncharacterized protein 98.7 4.8E-06 1.6E-10 83.2 23.8 195 139-409 5-203 (276)
447 3no2_A Uncharacterized protein 98.7 4.5E-06 1.5E-10 83.3 23.5 188 80-356 14-203 (276)
448 3s94_A LRP-6, low-density lipo 98.6 2.3E-05 7.8E-10 87.5 31.4 327 55-501 171-553 (619)
449 1rwi_B Serine/threonine-protei 98.6 4.1E-06 1.4E-10 83.4 23.1 200 56-352 25-226 (270)
450 1npe_A Nidogen, entactin; glyc 98.6 4.6E-06 1.6E-10 83.0 23.4 200 57-353 38-243 (267)
451 1q7f_A NHL, brain tumor CG1071 98.6 4.1E-06 1.4E-10 84.3 23.3 237 126-446 31-279 (286)
452 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00018 6.1E-09 80.4 38.1 336 55-507 166-557 (628)
453 1mda_H Methylamine dehydrogena 98.6 7E-07 2.4E-11 92.4 17.1 110 65-205 30-162 (368)
454 1ijq_A LDL receptor, low-densi 98.6 2.7E-05 9.4E-10 79.4 28.5 235 182-506 2-245 (316)
455 2ece_A 462AA long hypothetical 98.6 2.5E-06 8.4E-11 88.7 20.1 123 56-202 139-292 (462)
456 2oit_A Nucleoporin 214KDA; NH2 98.6 8.5E-07 2.9E-11 95.2 17.6 153 57-246 95-259 (434)
457 1ijq_A LDL receptor, low-densi 98.6 3.5E-05 1.2E-09 78.6 28.8 220 82-402 11-238 (316)
458 3fvz_A Peptidyl-glycine alpha- 98.6 6.5E-06 2.2E-10 84.8 23.5 256 125-447 24-320 (329)
459 2z2n_A Virginiamycin B lyase; 98.6 6.6E-05 2.3E-09 75.6 30.8 272 126-500 16-296 (299)
460 1rwi_B Serine/threonine-protei 98.6 2.9E-06 9.9E-11 84.5 20.2 232 126-447 25-262 (270)
461 3hrp_A Uncharacterized protein 98.6 1.8E-05 6.1E-10 84.0 27.2 250 126-447 132-408 (409)
462 3v64_C Agrin; beta propeller, 98.6 2.5E-05 8.6E-10 80.8 27.5 236 181-506 44-282 (349)
463 3p5b_L Low density lipoprotein 98.6 3.1E-05 1.1E-09 81.7 28.1 228 81-409 92-328 (400)
464 2qc5_A Streptogramin B lactona 98.6 3.2E-05 1.1E-09 78.1 27.2 272 56-447 21-298 (300)
465 3bix_A Neuroligin-1, neuroligi 98.6 1.5E-07 5E-12 104.0 10.1 124 537-672 112-248 (574)
466 3v65_B Low-density lipoprotein 98.5 1.3E-05 4.5E-10 84.3 24.6 236 181-506 87-325 (386)
467 3tjm_A Fatty acid synthase; th 98.5 3.8E-08 1.3E-12 99.2 4.7 96 553-673 23-124 (283)
468 3p5b_L Low density lipoprotein 98.5 3.6E-05 1.2E-09 81.3 27.5 235 182-506 84-327 (400)
469 2hih_A Lipase 46 kDa form; A1 98.5 2.3E-07 7.9E-12 97.5 9.9 115 553-673 51-212 (431)
470 2ece_A 462AA long hypothetical 98.5 6.9E-05 2.4E-09 77.9 27.6 117 63-204 90-242 (462)
471 2fp8_A Strictosidine synthase; 98.5 3.3E-05 1.1E-09 79.2 25.3 216 56-354 20-275 (322)
472 1fwx_A Nitrous oxide reductase 98.5 1.1E-05 3.6E-10 87.1 21.4 99 59-188 89-213 (595)
473 3sov_A LRP-6, low-density lipo 98.4 2.4E-05 8.2E-10 79.7 21.8 233 183-506 6-245 (318)
474 3sov_A LRP-6, low-density lipo 98.4 3.7E-05 1.3E-09 78.3 22.8 199 126-403 36-239 (318)
475 2qe8_A Uncharacterized protein 98.4 3E-05 1E-09 80.3 22.6 128 56-206 18-161 (343)
476 2qc5_A Streptogramin B lactona 98.4 0.00043 1.5E-08 69.5 30.6 270 126-497 21-298 (300)
477 2iwa_A Glutamine cyclotransfer 98.4 5.8E-05 2E-09 73.6 22.6 205 57-348 23-237 (266)
478 2dsn_A Thermostable lipase; T1 98.4 1.8E-06 6.2E-11 89.3 11.6 107 553-672 5-163 (387)
479 3m0c_C LDL receptor, low-densi 98.3 0.00025 8.7E-09 80.9 28.5 226 82-408 405-639 (791)
480 3m0c_C LDL receptor, low-densi 98.2 0.00021 7.1E-09 81.7 26.3 233 183-506 397-639 (791)
481 1n7d_A LDL receptor, low-densi 98.2 1.1E-05 3.9E-10 91.5 14.9 227 81-408 386-621 (699)
482 3nol_A Glutamine cyclotransfer 98.2 0.00035 1.2E-08 67.2 21.9 201 58-343 46-254 (262)
483 2p4o_A Hypothetical protein; p 98.1 0.00089 3E-08 67.8 25.8 235 172-485 34-278 (306)
484 2p4o_A Hypothetical protein; p 98.1 0.0016 5.6E-08 65.8 27.1 180 286-502 54-244 (306)
485 1whs_A Serine carboxypeptidase 98.1 3.9E-05 1.3E-09 73.6 12.8 147 526-676 23-189 (255)
486 1kb0_A Quinohemoprotein alcoho 98.0 0.0019 6.4E-08 73.2 28.8 82 393-485 457-540 (677)
487 2iwa_A Glutamine cyclotransfer 98.0 0.00099 3.4E-08 64.9 22.4 173 285-499 44-237 (266)
488 2qe8_A Uncharacterized protein 98.0 0.00049 1.7E-08 71.0 21.8 122 55-197 67-224 (343)
489 2fp8_A Strictosidine synthase; 98.0 0.00025 8.5E-09 72.5 18.0 253 127-447 21-311 (322)
490 1kb0_A Quinohemoprotein alcoho 98.0 0.0031 1.1E-07 71.3 28.6 80 339-431 457-537 (677)
491 1n7d_A LDL receptor, low-densi 98.0 4.7E-05 1.6E-09 86.4 13.6 144 55-246 406-558 (699)
492 3tc9_A Hypothetical hydrolase; 98.0 0.0049 1.7E-07 65.5 28.4 153 127-348 139-301 (430)
493 3qqz_A Putative uncharacterize 97.9 0.0039 1.3E-07 60.3 24.8 212 56-348 28-253 (255)
494 1yiq_A Quinohemoprotein alcoho 97.9 0.0079 2.7E-07 68.2 30.3 81 393-485 455-538 (689)
495 1fwx_A Nitrous oxide reductase 97.9 0.00029 9.9E-09 76.0 17.2 91 138-249 100-216 (595)
496 4hw6_A Hypothetical protein, I 97.9 0.0027 9.2E-08 67.5 24.3 140 56-246 140-291 (433)
497 1ivy_A Human protective protei 97.9 6.5E-05 2.2E-09 79.6 11.4 142 528-674 25-182 (452)
498 1yiq_A Quinohemoprotein alcoho 97.8 0.0069 2.4E-07 68.7 28.5 82 338-432 454-536 (689)
499 4a2l_A BT_4663, two-component 97.8 0.036 1.2E-06 64.3 35.0 293 127-502 175-483 (795)
500 3mbr_X Glutamine cyclotransfer 97.8 0.0051 1.7E-07 58.6 22.3 190 58-333 24-223 (243)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=3.7e-76 Score=686.84 Aligned_cols=684 Identities=22% Similarity=0.351 Sum_probs=566.1
Q ss_pred ccccChHhhhcCCCCCCcCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHH
Q 004067 38 CVLFSLEEIVQSPLPGYVAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRR 117 (776)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 117 (776)
++.+|+++++..... ....+++|||||++|+.. + .+|++||+++|+.++++...... .
T Consensus 2 ~~~~tl~~~~~~~~~--~~~~~~~w~~dg~~~~~~---~----~~i~~~~~~~~~~~~~~~~~~~~----~--------- 59 (740)
T 4a5s_A 2 RKTYTLTDYLKNTYR--LKLYSLRWISDHEYLYKQ---E----NNILVFNAEYGNSSVFLENSTFD----E--------- 59 (740)
T ss_dssp CEECCHHHHHHTCSC--CCCCCEEECSSSEEEEEE---T----TEEEEEETTTCCEEEEECTTTTT----T---------
T ss_pred CCceeHHHHhcCccc--ccccccEECCCCcEEEEc---C----CcEEEEECCCCceEEEEechhhh----h---------
Confidence 456899999985321 235789999999877652 2 47999999999988776532200 0
Q ss_pred HHHHHhcCCeeeEEEeecCCCceEEEEeCC----------CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEE
Q 004067 118 ERLRERGLGVTRYEWVKTSSKKKIIMVPLP----------DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFV 187 (776)
Q Consensus 118 ~~~~~~~~~~~~~~~sp~~~dg~~l~~~~~----------~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~ 187 (776)
......++.||| ||++|+|..+ +++|+||+.+++.+ +++.... .+..++|||||++|||+
T Consensus 60 -----~~~~~~~~~~Sp---dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~-~~~~~~~SPdG~~la~~ 129 (740)
T 4a5s_A 60 -----FGHSINDYSISP---DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPN-NTQWVTWSPVGHKLAYV 129 (740)
T ss_dssp -----CCSCCCEEEECT---TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCT-TEEEEEECSSTTCEEEE
T ss_pred -----hcccccceEECC---CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCC-cceeeEECCCCCEEEEE
Confidence 001123589999 9999999854 68999999999988 7876554 48899999999999999
Q ss_pred ECCcEEEEecCCCceeEEeeCCCCCceecCCcccceeccc-CCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCC
Q 004067 188 RDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVG 266 (776)
Q Consensus 188 ~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 266 (776)
++++||++++++|+.++||.++....+..|.++|+++||+ ++..+++|||||++|+|.+.+++.+..+.+..+......
T Consensus 130 ~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~ 209 (740)
T 4a5s_A 130 WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQ 209 (740)
T ss_dssp ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCS
T ss_pred ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCC
Confidence 9999999999999999999877766788999999999995 888899999999999999999998999988877654323
Q ss_pred CCCcceecCCCCCCCCCeEEEEEEEcCC---C---ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEE
Q 004067 267 SEAQEDHAYPFAGASNVKVRLGVVSAAG---G---PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLK 340 (776)
Q Consensus 267 ~~~~~~~~~~~~g~~~~~~~l~~~d~~~---~---~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 340 (776)
.+....++|+.+|..+....|++||+++ + +...+..+. .+..+..++..++|||||+.+++..++.++...
T Consensus 210 ~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~ 286 (740)
T 4a5s_A 210 YPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA---SMLIGDHYLCDVTWATQERISLQWLRRIQNYSV 286 (740)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH---HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE
T ss_pred CCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc---cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE
Confidence 3566788999999999999999999999 8 566663310 001366789999999999988888899888889
Q ss_pred EEEEECCCCc-------eEEEEEeccCceeec----ccccccCCCCccccCCeEE-EEeccCCceEEEEEeCCCceeecc
Q 004067 341 VLKFDIKTGQ-------RKVILVEELDSWVNL----HDCFTPLDKGVTKYSGGFI-WASEKTGFRHLYLHDINGTCLGPI 408 (776)
Q Consensus 341 l~~~d~~~g~-------~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~s~~~g~~~l~~~~~~g~~~~~l 408 (776)
|++||+++|+ .+.+.++....|+.. .+.|+| ++..++ +.++++|+.+||++++++++.++|
T Consensus 287 i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp-------DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 287 MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL-------DGNSFYKIISNEEGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT-------TSSEEEEEEECTTSCEEEEEEETTCSSCEES
T ss_pred EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC-------CCCEEEEEEEcCCCceEEEEEECCCCceEec
Confidence 9999999987 445555555667642 233333 445566 788899999999999999999999
Q ss_pred ccCCeEEEEEEeecCCCcEEEEEEcc--CCCceeeEEEEEeCCCCCCccccceeecCC-----CCeEEEEEcCCcCEEEE
Q 004067 409 TEGDWMVEQIVGVNEASGQVYFTGTL--DGPLESHLYCAKLYPDWNHTLEAPVKLTNG-----KGKHVAVLDHNMRNFVD 481 (776)
Q Consensus 409 t~~~~~~~~~~~~s~dg~~i~~~~~~--~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~-----~~~~~~~~spdg~~l~~ 481 (776)
|.+.+.+..+.. +||+.|||.++. +++.+.+||++++ +|. ...++|++. .+...++|||||+++++
T Consensus 360 T~g~~~v~~~~~--~d~~~i~f~~~~~~~~~~~~~ly~v~~--~g~---~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~ 432 (740)
T 4a5s_A 360 TKGTWEVIGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQL--IDY---TKVTCLSCELNPERCQYYSVSFSKEAKYYQL 432 (740)
T ss_dssp CCSSSCEEEEEE--ECSSEEEEEESCGGGCTTCBEEEEEET--TEE---EEEEESSTTTSTTTBCBEEEEECTTSSEEEE
T ss_pred ccCCEEEEEEEE--EeCCEEEEEEecCCCCCceeEEEEEEC--CCC---CcceeeccccCCCCCceEEEEECCCCCEEEE
Confidence 999988887654 458999999987 6677899999998 443 123478753 46788999999999999
Q ss_pred EeeCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEc
Q 004067 482 FHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVY 561 (776)
Q Consensus 482 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~H 561 (776)
.++++. ||.+++++..+++..+.+..+......+....++..+.+.+ ..+|..++++++.|++.. ..+++|+||++|
T Consensus 433 ~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~-~~~~~P~vv~~H 509 (740)
T 4a5s_A 433 RCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFD-KSKKYPLLLDVY 509 (740)
T ss_dssp EECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCC-TTSCEEEEEECC
T ss_pred EeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCC-CCCCccEEEEEC
Confidence 999877 89999999988876666666555556778888888888888 669999999999998752 336899999999
Q ss_pred CCCCcccccccccccchhhhHHHH-hCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcE
Q 004067 562 GGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHI 640 (776)
Q Consensus 562 G~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i 640 (776)
|+++.+.+...|...+ ...++ ++||+|+++|+||+|+++..+.......++..+++|+.++++++.++..+|.++|
T Consensus 510 Gg~~~~~~~~~~~~~~---~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri 586 (740)
T 4a5s_A 510 AGPCSQKADTVFRLNW---ATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRI 586 (740)
T ss_dssp CCTTCCCCCCCCCCSH---HHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEE
T ss_pred CCCcccccccccCcCH---HHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccE
Confidence 9988876555664333 44555 6999999999999999999888888788888889999999999998888899999
Q ss_pred EEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCC--CCCccchhcCChhhhhccCCC-cEEEEe
Q 004067 641 GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP--SEDPVGYEYSSVMHHVHKMKG-KLLLVH 717 (776)
Q Consensus 641 ~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~-P~lii~ 717 (776)
+|+||||||++|+.+++++|++|+++++.+|+.+|..+...+.+++++.| ......|...++...+.+++. |+|++|
T Consensus 587 ~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~ 666 (740)
T 4a5s_A 587 AIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIH 666 (740)
T ss_dssp EEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEE
T ss_pred EEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhHHHHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEE
Confidence 99999999999999999999999999999999999988888888888877 666777888899999999986 999999
Q ss_pred cCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 718 GMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 718 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
|+.|..+|+.++.+++++|++++++++++++|+++|.+...+...++++.+.+||+++|
T Consensus 667 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 725 (740)
T 4a5s_A 667 GTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 725 (740)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999998667778899999999999876
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.2e-70 Score=643.74 Aligned_cols=705 Identities=33% Similarity=0.591 Sum_probs=553.4
Q ss_pred ccccChHhhhcCCCCCCcCCCceeEcCCCCEEEEEeC-CCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHH
Q 004067 38 CVLFSLEEIVQSPLPGYVAPTSIGFSPDDNLITYLLS-PDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLR 116 (776)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~ia~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~ 116 (776)
.+.+++++++..+.+.+..+.+++|||||++|+|.+. ..+....+||+||+++++.++++.......+...++.+++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (741)
T 2ecf_A 20 AEKLTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKAR 99 (741)
T ss_dssp --CCCHHHHTSSSCTTCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC-------------
T ss_pred cccccHHHHhccCCcCCCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhh
Confidence 4569999999766666677799999999999999987 332233589999999999988886432111111233333222
Q ss_pred HHHHHHhc-CCeeeEEEeecCCCceEEEEeCCCcEEEEeCCCC---ccceecCCCCCCCccCceeCCCCCEEEEEECCcE
Q 004067 117 RERLRERG-LGVTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCS---KPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCEL 192 (776)
Q Consensus 117 ~~~~~~~~-~~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~---~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l 192 (776)
.++.+..+ .++..+.||| ||++|++...++|++||+.++ +.+ .++.... .+..+.|||||++|||+++++|
T Consensus 100 ~~~~~~~~~~~v~~~~~Sp---Dg~~l~~~~~~~i~~~d~~~~~~~~~~-~l~~~~~-~~~~~~~SPDG~~la~~~~~~i 174 (741)
T 2ecf_A 100 RERQRIAAMTGIVDYQWSP---DAQRLLFPLGGELYLYDLKQEGKAAVR-QLTHGEG-FATDAKLSPKGGFVSFIRGRNL 174 (741)
T ss_dssp -------CCEESCCCEECT---TSSEEEEEETTEEEEEESSSCSTTSCC-BCCCSSS-CEEEEEECTTSSEEEEEETTEE
T ss_pred hhhhhhccccCcceeEECC---CCCEEEEEeCCcEEEEECCCCCcceEE-EcccCCc-ccccccCCCCCCEEEEEeCCcE
Confidence 22222111 2367899999 999999998899999999999 776 6766543 4788999999999999999999
Q ss_pred EEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcce
Q 004067 193 HVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQED 272 (776)
Q Consensus 193 ~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (776)
|++++++|+.++++..+. ..+..+..+|+++++..+...++|||||++|+|.+.+.+....+....... .......
T Consensus 175 ~~~d~~~g~~~~~~~~~~-~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p---~~~~~~~ 250 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGS-TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYA---DRTDVIE 250 (741)
T ss_dssp EEEETTTTEEEECCCCCC-SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECS---SCEEEEE
T ss_pred EEEecCCCCEEEeccCCc-cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCC---CcccceE
Confidence 999999999988876553 346678889999999988899999999999999987776555444211111 1123566
Q ss_pred ecCCCCCCCCCeEEEEEEEcCC-CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEe-ecCceEEEEEEECCCCc
Q 004067 273 HAYPFAGASNVKVRLGVVSAAG-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN-RSQTKLKVLKFDIKTGQ 350 (776)
Q Consensus 273 ~~~~~~g~~~~~~~l~~~d~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~-~~~~~~~l~~~d~~~g~ 350 (776)
++|+..|..+....|++||+++ ++...+... ..+...+..++| |||+.|++... +......|++||+++|+
T Consensus 251 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 251 QRYPAAGDANVQVKLGVISPAEQAQTQWIDLG------KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp EECCBTTSCCCEEEEEEECSSTTCCCEEECCC------SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred eecCCCCCCCCeeEEEEEECCCCCceEEecCC------CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 7889999988899999999999 988777432 245678899999 99997777654 55667899999999999
Q ss_pred eEEEEEeccCceee--cccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEE
Q 004067 351 RKVILVEELDSWVN--LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV 428 (776)
Q Consensus 351 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i 428 (776)
.+.+.......|.. ....|+| +++++++++.+|..+||.++++++ .++|+.+.+.+..+..||+||+.|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~sp--------dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 324 QRVLAHETSPTWVPLHNSLRFLD--------DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp EEEEEEEECSSCCCCCSCCEECT--------TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEE
T ss_pred eEEEEEcCCCCcCCcCCceEECC--------CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEE
Confidence 98887766555532 1223333 234888888889999999999888 899999888787776799999999
Q ss_pred EEEEccCCCceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEeecc
Q 004067 429 YFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 508 (776)
Q Consensus 429 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 508 (776)
++.+..+++...+||.+++ +|. .+++|+...++..++|||||++|++.+++...|+++++++.. +...+.++.
T Consensus 395 ~~~~~~~~~~~~~l~~~~~--~g~----~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~-~~~~~~l~~ 467 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPL--QGG----QPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRAN-GEKIATLVE 467 (741)
T ss_dssp EEEECSSCTTCBEEEEEET--TCC----CCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT-SCEEECSSC
T ss_pred EEEEeCCCCceEEEEEEEc--CCC----CeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC-CCeEEEecc
Confidence 9999877655689999997 454 578888866788899999999999999999999999999984 444566665
Q ss_pred CCC-chh-hhhcc--CCCCceEEEEEcCCC-cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccch-hhhH
Q 004067 509 QPL-TVP-RIKRL--QLEPPDIVQIQANDG-TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVD-MRAQ 582 (776)
Q Consensus 509 ~~~-~~~-~~~~~--~~~~~~~~~~~~~dg-~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~-~~~~ 582 (776)
+.. ... .+.+. .+...+.+.+++.+| ..++++++.|++.. ..+++|+||++||+++.......|..... .+++
T Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~-~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~ 546 (741)
T 2ecf_A 468 NDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFD-PAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQ 546 (741)
T ss_dssp CCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSCC-TTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHH
T ss_pred CcccccccchhhhhccCCCcEEEEEEcCCCCEEEEEEEEeCCCCC-CCCCcCEEEEEcCCCCcccccccccccchhHHHH
Confidence 433 222 45556 788899999999999 99999999998642 22578999999998877543344532211 3578
Q ss_pred HHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCc
Q 004067 583 YLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV 662 (776)
Q Consensus 583 ~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~ 662 (776)
.|+++||+|+++|+||+|.++..+.......++..+++|+.++++++.++..++.++++|+||||||++++.++.++|++
T Consensus 547 ~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~ 626 (741)
T 2ecf_A 547 YLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDS 626 (741)
T ss_dssp HHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTT
T ss_pred HHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCc
Confidence 89999999999999999999888776666666677789999999999998878889999999999999999999999999
Q ss_pred eEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCC
Q 004067 663 FQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 742 (776)
Q Consensus 663 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 742 (776)
|+++++.+|+.++..+...+.+.+++.+......|...++...+.++++|+|++||+.|..+++.++.++++++...+++
T Consensus 627 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 706 (741)
T 2ecf_A 627 YACGVAGAPVTDWGLYDSHYTERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQP 706 (741)
T ss_dssp CSEEEEESCCCCGGGSBHHHHHHHHCCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCC
T ss_pred eEEEEEcCCCcchhhhccccchhhcCCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCc
Confidence 99999999999987776666666666666656667777888889999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 743 YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 743 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
++++++++++|.+... ...++++.+.+||+++|
T Consensus 707 ~~~~~~~~~~H~~~~~-~~~~~~~~i~~fl~~~l 739 (741)
T 2ecf_A 707 FELMTYPGAKHGLSGA-DALHRYRVAEAFLGRCL 739 (741)
T ss_dssp CEEEEETTCCSSCCHH-HHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCCCCC-chhHHHHHHHHHHHHhc
Confidence 9999999999988433 23789999999999875
No 3
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=4.2e-69 Score=629.01 Aligned_cols=685 Identities=22% Similarity=0.353 Sum_probs=538.9
Q ss_pred ccccChHhhhcCCCCCCcCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHH
Q 004067 38 CVLFSLEEIVQSPLPGYVAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRR 117 (776)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 117 (776)
.+.+|+++++..+. ...+.+++|||||++|+ .+ .+ .+|++||+++++.+++......
T Consensus 2 ~~~~~~~~~~~~~~--~~~~~~~~~spdg~~~~-~~-~d----g~i~~~d~~~g~~~~~~~~~~~--------------- 58 (723)
T 1xfd_A 2 KKKVTVEDLFSEDF--KIHDPEAKWISDTEFIY-RE-QK----GTVRLWNVETNTSTVLIEGKKI--------------- 58 (723)
T ss_dssp CCCCCHHHHTCTTT--CCCCCCCCBSSSSCBCC-CC-SS----SCEEEBCGGGCCCEEEECTTTT---------------
T ss_pred CccccHHHHhCCCC--cccccccEEcCCCcEEE-Ee-CC----CCEEEEECCCCcEEEEeccccc---------------
Confidence 34589999997642 23468999999999664 32 22 4799999999998877753220
Q ss_pred HHHHHhcCCeeeEEEeecCCCceEEEEeCC----------CcEEEEeCCCCccceecCCCCC--CCccCceeCCCCCEEE
Q 004067 118 ERLRERGLGVTRYEWVKTSSKKKIIMVPLP----------DGIYFQDLSCSKPELKLSSSSC--SPVIDPHLSSDGTMIA 185 (776)
Q Consensus 118 ~~~~~~~~~~~~~~~sp~~~dg~~l~~~~~----------~~l~~~d~~~~~~~~~l~~~~~--~~~~~~~~SpDg~~la 185 (776)
...++..+.||| ||++|++..+ ++|++||+++++.+ .++.... ..+..++|||||++||
T Consensus 59 -----~~~~v~~~~~Sp---Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~SPdG~~la 129 (723)
T 1xfd_A 59 -----ESLRAIRYEISP---DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-SLDPPEVSNAKLQYAGWGPKGQQLI 129 (723)
T ss_dssp -----TTTTCSEEEECT---TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE-ECCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred -----cccccceEEECC---CCCEEEEEecCccceeecceeeEEEEECCCCceE-eccCCccccccccccEECCCCCEEE
Confidence 001478899999 9999999843 78999999999886 6664332 1267899999999999
Q ss_pred EEECCcEEEEecCCCceeEEeeCCCCCceecCCcccceeccc-CCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCC
Q 004067 186 FVRDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSS 264 (776)
Q Consensus 186 ~~~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 264 (776)
|+++++||++++++|+.++++..+....+..|.++|+++||+ ..+..++|||||+.|+|.+.+......+.+......
T Consensus 130 ~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~- 208 (723)
T 1xfd_A 130 FIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS- 208 (723)
T ss_dssp EEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS-
T ss_pred EEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc-
Confidence 999999999999999999998765555567788899988875 566789999999999999988777777766544332
Q ss_pred CCCCCcceecCCCCCCCCCeEEEEEEEcCCCce-EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEE
Q 004067 265 VGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV-SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLK 343 (776)
Q Consensus 265 ~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~ 343 (776)
.......+.|+.+|..+....|++||+++++. ..+... ..+......+..++|||||+++++..++......|++
T Consensus 209 -~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 284 (723)
T 1xfd_A 209 -IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP---DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTL 284 (723)
T ss_dssp -SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC---CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEE
T ss_pred -CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC---ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEE
Confidence 22346778899889888888999999999884 554221 0011235678899999999988888887777889999
Q ss_pred EECCCCceEEEEEeccCceee---cccccccCCCCccccCCeEEEE-eccCC----ceEEEEEe-CCCce---eeccccC
Q 004067 344 FDIKTGQRKVILVEELDSWVN---LHDCFTPLDKGVTKYSGGFIWA-SEKTG----FRHLYLHD-INGTC---LGPITEG 411 (776)
Q Consensus 344 ~d~~~g~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-s~~~g----~~~l~~~~-~~g~~---~~~lt~~ 411 (776)
||+++|+.+.+.......|.. ....|+| ++..+++. ++.++ ..+||+|+ .++++ .++|+.+
T Consensus 285 ~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp-------dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~ 357 (723)
T 1xfd_A 285 CDATTGVCTKKHEDESEAWLHRQNEEPVFSK-------DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG 357 (723)
T ss_dssp EETTTCCEEEEEEEECSSCCCCCCCCCEECT-------TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS
T ss_pred EeCCCCcceEEEEeccCCEEeccCCCceEcC-------CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC
Confidence 999999988776654444532 1223333 34557776 66677 77999999 67887 8899977
Q ss_pred CeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecC----CCCeEEEEEcCCcCEEEEEeeCCC
Q 004067 412 DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN----GKGKHVAVLDHNMRNFVDFHDSLD 487 (776)
Q Consensus 412 ~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~----~~~~~~~~~spdg~~l~~~~~~~~ 487 (776)
.+.+...+.|||||+.|+|.+..+.+...+||.+++ +|. ...++|+. ...+..++|||||++|++.+++++
T Consensus 358 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~--~~~---~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 432 (723)
T 1xfd_A 358 DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT--VGN---FNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG 432 (723)
T ss_dssp SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS--STT---CCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC--CCC---CCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence 776766667999999999998876445689999997 442 13556664 334678999999999999999998
Q ss_pred CCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcc
Q 004067 488 SPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQ 567 (776)
Q Consensus 488 ~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~ 567 (776)
.|+.++ ++..++..+..+..+......+.+..+...+.+.+++.+| +++++++.|++.. ..+++|+||++||+++..
T Consensus 433 ~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~-~~~~~p~vv~~HG~~~~~ 509 (723)
T 1xfd_A 433 VPMVTV-HNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATFT-DTTHYPLLLVVDGTPGSQ 509 (723)
T ss_dssp SCCEEE-EETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSCC-SSSCEEEEEECCCCTTCC
T ss_pred CCeEEE-EECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCCC-CCCccCEEEEEcCCCCcc
Confidence 887665 4766666555554433233467778888899999999899 9999999998742 236889999999988765
Q ss_pred cccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeech
Q 004067 568 LVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSY 647 (776)
Q Consensus 568 ~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~ 647 (776)
.....|.. ...+..++++||+|+++|+||+|+++..+.......++...++|+.++++++.++..+|.++|+|+||||
T Consensus 510 ~~~~~~~~--~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~ 587 (723)
T 1xfd_A 510 SVAEKFEV--SWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDY 587 (723)
T ss_dssp CCCCCCCC--SHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETH
T ss_pred ccCccccc--cHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECH
Confidence 43444432 2345677789999999999999999887766655666667799999999999988778889999999999
Q ss_pred HHHHHHHHHhhC----CCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCC-CcEEEEecCCCC
Q 004067 648 GGYLSAITLARF----PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDE 722 (776)
Q Consensus 648 GG~~a~~~a~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~G~~D~ 722 (776)
||++++.++.++ |++|+++++.+|+.++..+...+.+.+++.+......+...++...+.+++ +|+|++||++|.
T Consensus 588 GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~ 667 (723)
T 1xfd_A 588 GGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADE 667 (723)
T ss_dssp HHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCS
T ss_pred HHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhccHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCC
Confidence 999999999999 999999999999999887766666666676666566677778888899999 799999999999
Q ss_pred ccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 723 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 723 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
.+|+.++.++++++++.+.+++++++|+++|.+...+...++++.+.+||+++|
T Consensus 668 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 668 KIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 721 (723)
T ss_dssp SSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred CcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998666778899999999999875
No 4
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-67 Score=614.06 Aligned_cols=676 Identities=22% Similarity=0.377 Sum_probs=532.3
Q ss_pred ccChHhhhcCCCCCCcCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHH
Q 004067 40 LFSLEEIVQSPLPGYVAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRER 119 (776)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~ 119 (776)
.+|+++++..+.. ....+++|||||+ +++.+. + .+|++||+++++.++++....
T Consensus 3 ~~~~~~~~~~~~~--~~~~~~~~s~dg~-~~~~~~-d----~~i~~~~~~~g~~~~~~~~~~------------------ 56 (719)
T 1z68_A 3 ALTLKDILNGTFS--YKTFFPNWISGQE-YLHQSA-D----NNIVLYNIETGQSYTILSNRT------------------ 56 (719)
T ss_dssp CCCHHHHHHTTTC--CCCCCCEESSSSE-EEEECT-T----SCEEEEESSSCCEEEEECHHH------------------
T ss_pred cccHHHHhcCccc--CCCCccEECCCCe-EEEEcC-C----CCEEEEEcCCCcEEEEEcccc------------------
Confidence 4789999886522 2345889999995 444432 2 479999999999988885211
Q ss_pred HHHhcCCeeeEEEeecCCCceEEEEeCC----------CcEEEEeCCCCcc---ceecCCCCCCCccCceeCCCCCEEEE
Q 004067 120 LRERGLGVTRYEWVKTSSKKKIIMVPLP----------DGIYFQDLSCSKP---ELKLSSSSCSPVIDPHLSSDGTMIAF 186 (776)
Q Consensus 120 ~~~~~~~~~~~~~sp~~~dg~~l~~~~~----------~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~SpDg~~la~ 186 (776)
....++..+.||| ||++|+|..+ +.|++||+++++. + .++. .+..++|||||++|||
T Consensus 57 --~~~~~~~~~~~Sp---Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l~~----~~~~~~~SPDG~~la~ 126 (719)
T 1z68_A 57 --MKSVNASNYGLSP---DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-ELPR----PIQYLCWSPVGSKLAY 126 (719)
T ss_dssp --HHTTTCSEEEECT---TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCS----SBCCEEECSSTTCEEE
T ss_pred --ccccceeeEEECC---CCCeEEEEecCceeEEeecceEEEEEECCCCccccce-ecCc----ccccceECCCCCEEEE
Confidence 0012478899999 9999999843 7899999999988 5 5542 3778999999999999
Q ss_pred EECCcEEEEecCCCceeEEeeCCCCCceecCCcccceeccc-CCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCC
Q 004067 187 VRDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSV 265 (776)
Q Consensus 187 ~~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 265 (776)
+++++||++++.+|+.++++..+....+..|.++|+++||+ .....++|||||++|+|.+.+.+....+.+..+...
T Consensus 127 ~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~-- 204 (719)
T 1z68_A 127 VYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDE-- 204 (719)
T ss_dssp EETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSS--
T ss_pred EECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCC--
Confidence 99999999999999999998776655677899999998886 666789999999999999988777777777666543
Q ss_pred CCCCcceecCCCCCCCCCeEEEEEEEcCCCceE---EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEE
Q 004067 266 GSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVS---WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVL 342 (776)
Q Consensus 266 ~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~ 342 (776)
..+....++|+..|..+....|++||+++++.. .+..+ ..+..+...+..++|||||++++...++......|+
T Consensus 205 ~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~ 281 (719)
T 1z68_A 205 QYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP---AMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLS 281 (719)
T ss_dssp SSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCC---HHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEE
T ss_pred CCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCC---ccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEE
Confidence 235677889999999999999999999998752 33210 001245678899999999987777667777778999
Q ss_pred EEE----CCCCceEEEEE---eccCceeec----ccccccCCCCccccCCeEEE-EeccCCceEEEEEeCCCceeecccc
Q 004067 343 KFD----IKTGQRKVILV---EELDSWVNL----HDCFTPLDKGVTKYSGGFIW-ASEKTGFRHLYLHDINGTCLGPITE 410 (776)
Q Consensus 343 ~~d----~~~g~~~~l~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~s~~~g~~~l~~~~~~g~~~~~lt~ 410 (776)
++| +++|+.+.++. .....|... ...|+| ++..+++ .++.+|..+||++++++++.++|+.
T Consensus 282 ~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-------dg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~ 354 (719)
T 1z68_A 282 ICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY-------DAISYYKIFSDKDGYKHIHYIKDTVENAIQITS 354 (719)
T ss_dssp EEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT-------TSSCEEEEEECTTSCEEEEEESSCSTTCEECSC
T ss_pred EEcccCCCCCCceEEEEecccccCCceEccccCCccEECC-------CCCeEEEEEEccCCceEEEEEECCCCceEeccc
Confidence 999 88888776653 333444431 223333 3445666 4667899999999999998999998
Q ss_pred CCeEEEEEEeecCCCcEEEEEEcc--CCCceeeEEEEEeCCCCCCccccceeecC-----CCCeEEEEEcCCcCEEEEEe
Q 004067 411 GDWMVEQIVGVNEASGQVYFTGTL--DGPLESHLYCAKLYPDWNHTLEAPVKLTN-----GKGKHVAVLDHNMRNFVDFH 483 (776)
Q Consensus 411 ~~~~~~~~~~~s~dg~~i~~~~~~--~~~~~~~l~~~~~~~~g~~~~~~~~~l~~-----~~~~~~~~~spdg~~l~~~~ 483 (776)
+.+.+..+..+ ||+.|+|.+.. +.+...+||.++++ +|. ...++|+. ..++..++|||||+++++.+
T Consensus 355 ~~~~v~~~~~~--d~~~i~~~~~~~~~~~~~~~l~~~~~~-~g~---~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~ 428 (719)
T 1z68_A 355 GKWEAINIFRV--TQDSLFYSSNEFEEYPGRRNIYRISIG-SYP---PSKKCVTCHLRKERCQYYTASFSDYAKYYALVC 428 (719)
T ss_dssp SSSCEEEEEEE--CSSEEEEEESCGGGCTTCBEEEEEECS-SSS---CCEEESSTTTTTTTBCBEEEEECGGGSSEEEEE
T ss_pred CceEEEEEEEE--eCCEEEEEEecCCCCCceEEEEEEeCC-CCC---CCceeccCccCCCCCceEEEEECCCCCEEEEEc
Confidence 88777776644 89999999976 33345899999983 221 13466664 23567889999999999998
Q ss_pred eCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCC
Q 004067 484 DSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGG 563 (776)
Q Consensus 484 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~ 563 (776)
++++.| .+++++..+++..+.+..++.....++...++..+.+++++.+ .+++++++.|++.. ..+++|+||++||+
T Consensus 429 s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~~-~~~~~p~vl~~hG~ 505 (719)
T 1z68_A 429 YGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQFD-RSKKYPLLIQVYGG 505 (719)
T ss_dssp CCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTCC-SSSCEEEEEEECCC
T ss_pred CCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-eEEEEEEEeCCCCC-CCCCccEEEEECCC
Confidence 887765 7899998888765555544333346777788888999999877 89999999998742 23678999999999
Q ss_pred CCcccccccccccchhhhHHH-HhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEE
Q 004067 564 PCVQLVCDSWINTVDMRAQYL-RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGL 642 (776)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l 642 (776)
++.......|... ++..+ +++||+|+++|+||+|.++..+.......++...++|+.++++++.++..+|.++++|
T Consensus 506 ~~~~~~~~~~~~~---~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l 582 (719)
T 1z68_A 506 PCSQSVRSVFAVN---WISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAI 582 (719)
T ss_dssp TTBCCCCCCCCCC---HHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEE
T ss_pred CCcCcccccchhh---HHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEE
Confidence 8775444444322 24445 4799999999999999999887776666666677899999999999987788999999
Q ss_pred EeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCC--CCCccchhcCChhhhhccCCC-cEEEEecC
Q 004067 643 YGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP--SEDPVGYEYSSVMHHVHKMKG-KLLLVHGM 719 (776)
Q Consensus 643 ~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~-P~lii~G~ 719 (776)
+||||||++++.++.++|++|+++++.+|+.++..+...+.+.+++.+ ......|...++...+.+++. |+|++||+
T Consensus 583 ~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~ 662 (719)
T 1z68_A 583 WGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGT 662 (719)
T ss_dssp EEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHHHHHHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEET
T ss_pred EEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccccchhhcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeC
Confidence 999999999999999999999999999999998877666666666665 334456777788888999987 89999999
Q ss_pred CCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 720 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 720 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+|.++++.++.+++++|++.+++++++++|+++|.+ ..+...++++.+.+||+++|
T Consensus 663 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 663 ADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp TCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999998 55668899999999999875
No 5
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=1.1e-64 Score=589.71 Aligned_cols=667 Identities=27% Similarity=0.464 Sum_probs=522.9
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCce--EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQ--ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~--~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
+..++|+ |+.++|.+. + .| +||+++|+. +.+..+... ...++.++.. .+....++..+.|||
T Consensus 28 ~~~~~w~--g~~~~~~~~-~-----~i-~~d~~tg~~~~~~l~~~~~~---~~~l~~~~~~----~~~~~~~v~~~~~sp 91 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEG-D-----DL-VFNKANGKSAQTTRFSAADL---NALMPEGCKF----QTTDAFPSFRTLDAG 91 (706)
T ss_dssp CTTCEEE--TTEEEEEET-T-----EE-EEEC-------CEEEEHHHH---HTTC---------------CCCEEEEETT
T ss_pred CCCCcCc--CCeEEEEeC-C-----cE-EEECCCCcEeeEEeechhHh---hhhccchhcc----ccccccCceeEEECC
Confidence 3778999 777777654 2 28 999999988 777753210 0122222222 111225688999999
Q ss_pred cCCCceEEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCC-----CceeEEeeCC
Q 004067 135 TSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLI-----NEQRQLTHGA 209 (776)
Q Consensus 135 ~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~-----g~~~~lt~~~ 209 (776)
| +++++..++.|++||+.+++.+ .++.... .+..++|||||++|+|+.+++||++++.+ |+.++++..+
T Consensus 92 ---d-~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~-~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~ 165 (706)
T 2z3z_A 92 ---R-GLVVLFTQGGLVGFDMLARKVT-YLFDTNE-ETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDG 165 (706)
T ss_dssp ---T-TEEEEEETTEEEEEETTTTEEE-EEECCTT-CCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCC
T ss_pred ---C-CeEEEEECCEEEEEECCCCceE-EccCCcc-cccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCC
Confidence 9 8888888899999999999887 6665443 47889999999999999999999999999 9888887654
Q ss_pred CCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEE
Q 004067 210 NGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 289 (776)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~ 289 (776)
.. .+..|.+ ++++|......++|||||++|+|.+.+++....+.+...... .......+|+..|..+....|++
T Consensus 166 ~~-~~~~g~~--~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~---~~~~~~~~y~~~g~~~~~~~l~~ 239 (706)
T 2z3z_A 166 TE-TLVYGQA--VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPL---EAESKPLYYPMAGTPSHHVTVGI 239 (706)
T ss_dssp BT-TEEESSC--CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSS---SCEEEEECCCBTTSCCCEEEEEE
T ss_pred CC-CeEcccc--hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCC---CCceEEeeCCCCCCCCCeeEEEE
Confidence 32 3555655 778888888999999999999999988777776666554433 24566788999998888999999
Q ss_pred EEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEE-eecCceEEEEEEECCCC-ceEEEEEeccCceeec--
Q 004067 290 VSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVL-NRSQTKLKVLKFDIKTG-QRKVILVEELDSWVNL-- 365 (776)
Q Consensus 290 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~-~~~~~~~~l~~~d~~~g-~~~~l~~~~~~~~~~~-- 365 (776)
||+++++...+... ..+...+..++|||||+.|++.. ++......|++||+++| ..+.+..+....|...
T Consensus 240 ~d~~~~~~~~~~~~------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 240 YHLATGKTVYLQTG------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EETTTTEEEECCCC------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred EECCCCceEeeccC------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 99999988776432 23556789999999999777654 44556678999999999 6777765554445321
Q ss_pred ccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEE
Q 004067 366 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 445 (776)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~ 445 (776)
...|+| +.+++++++++++|..+||.++.+++..++|+.+.+.+...+.||+||+.|++.+..+++...+||.+
T Consensus 314 ~~~~sp------~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 314 PLTFLP------GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp CCEECT------TCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred Cceeec------CCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 112222 01345788888889999999999898899999988877775679999999999998876556799999
Q ss_pred EeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCce
Q 004067 446 KLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPD 525 (776)
Q Consensus 446 ~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 525 (776)
++. +. ..++|+...++..++|||||++|++.+++...|++|++++..+++ .+.+.... .+....+...+
T Consensus 388 d~~--~~----~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~-~~~~~~~~----~~~~~~~~~~~ 456 (706)
T 2z3z_A 388 DIK--GG----KTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS-HTLLEAKN----PDTGYAMPEIR 456 (706)
T ss_dssp ETT--CC----CCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE-EEEEECC----------CCCCEE
T ss_pred EcC--CC----CceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe-Eeeccccc----hhhhcCCCCcE
Confidence 983 33 567788777788899999999999999999999999999998877 45454321 35666788899
Q ss_pred EEEEEcCCC-cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCch
Q 004067 526 IVQIQANDG-TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 604 (776)
Q Consensus 526 ~~~~~~~dg-~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~ 604 (776)
.+.+++.+| ..++++++.|++.. ..+++|+||++||+++.......|......+++.|+++||+|+++|+||+|.++.
T Consensus 457 ~~~~~~~~g~~~~~~~~~~P~~~~-~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~ 535 (706)
T 2z3z_A 457 TGTIMAADGQTPLYYKLTMPLHFD-PAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGA 535 (706)
T ss_dssp EEEEECTTSSSEEEEEEECCTTCC-TTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCH
T ss_pred EEEEEcCCCCEEEEEEEEeCCCCC-CCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccch
Confidence 999999899 89999999998742 2357899999999887765445564432235788999999999999999999998
Q ss_pred hhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccc
Q 004067 605 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE 684 (776)
Q Consensus 605 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 684 (776)
.+.......++...++|+.++++++.++..+|.++++|+||||||++++.++.++|++|+++++.+|+.+|..+...+.+
T Consensus 536 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~ 615 (706)
T 2z3z_A 536 AFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGE 615 (706)
T ss_dssp HHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBHHHHH
T ss_pred hHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHhhhhh
Confidence 87766666666677899999999998888888899999999999999999999999999999999999999877777777
Q ss_pred cccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHH
Q 004067 685 KYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYM 764 (776)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 764 (776)
.+++.+......|...++...+.++++|+|++||+.|.++|+.++.++++++...+++++++++|+++|.+... ...++
T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~ 694 (706)
T 2z3z_A 616 RYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP-DRVHL 694 (706)
T ss_dssp HHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT-HHHHH
T ss_pred hhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHH
Confidence 77777777777788888888999999999999999999999999999999999989999999999999998544 78899
Q ss_pred HHHHHHHHHHhC
Q 004067 765 EERIWEFIERTL 776 (776)
Q Consensus 765 ~~~~~~fl~~~l 776 (776)
++.+.+||+++|
T Consensus 695 ~~~i~~fl~~~l 706 (706)
T 2z3z_A 695 YETITRYFTDHL 706 (706)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999999986
No 6
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=3.8e-51 Score=472.00 Aligned_cols=570 Identities=16% Similarity=0.159 Sum_probs=422.0
Q ss_pred cCCeeeEEEeecCCCceEEEEeC---CC--cEEEEeCCCCccceecCCCCCCCcc---------CceeC--CCCCE-EEE
Q 004067 124 GLGVTRYEWVKTSSKKKIIMVPL---PD--GIYFQDLSCSKPELKLSSSSCSPVI---------DPHLS--SDGTM-IAF 186 (776)
Q Consensus 124 ~~~~~~~~~sp~~~dg~~l~~~~---~~--~l~~~d~~~~~~~~~l~~~~~~~~~---------~~~~S--pDg~~-la~ 186 (776)
...+..+.|++ |+..++... ++ .||.+ ..+++.+ +++..... +. .+.|| |||++ |+|
T Consensus 23 ~~~~~~~~~s~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 23 SGRPACVGAVG---DEVWWVAPRPAEAGRATLVRR-RADGAEE-SALPAPWN-VRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp CSCCEEEEEET---TEEEEEEEETTTTTEEEEEEE-CTTSCEE-ESSCTTCC-BCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred CCccceeEEcC---CeEEEEecCcccCCcEEEEEE-CCCCCcc-eeCCCCcc-ccccccccCCccceeeeecCCCeEEEE
Confidence 45678888988 643333331 23 35555 5566666 77765432 33 45565 99999 999
Q ss_pred EEC--CcEEEEecC--C-CceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecC
Q 004067 187 VRD--CELHVLNLL--I-NEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQG 261 (776)
Q Consensus 187 ~~~--~~l~~~~l~--~-g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 261 (776)
..+ .+||++++. + ++.++|+..+... .......++|||||+.|+|.+.+....
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~-------------~~~~~~~~~~spDg~~l~~~~~~~~~~--------- 154 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVG-------------GGLRWADPVLLPERGEVWCMAEEFTGE--------- 154 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCCST-------------TCEEEEEEEEETTTTEEEEEEEEECSS---------
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCccCC-------------CCccccCcEECCCCCEEEEEEecccCC---------
Confidence 875 479999998 5 8888887632100 000134788999999999988642110
Q ss_pred CCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC------CceEEEEcccCCCCCC-CCcceEEEEEeccCCeEEEEEEee
Q 004067 262 KSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG------GPVSWMDLQCGGTDQN-YDEEYLARVNWMHGNILTAQVLNR 334 (776)
Q Consensus 262 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~------~~~~~l~~~~~~~~~~-~~~~~~~~~~~SpDg~~l~~~~~~ 334 (776)
+......+|++||+++ ++.+.+ . .+...+..++|||||+.|++.+..
T Consensus 155 -----------------~~~~~~~~i~~~~~~~~~~~~~~~~~~l---------~~~~~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 155 -----------------GPSDVRRFLAAVPLDGSAAADRSAVREL---------SDDAHRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp -----------------STTCEEEEEEEEETTSTTTTCGGGSEES---------SCSCSSEECCCEECTTSSEEEEEEEC
T ss_pred -----------------CCCCceeEEEEEECCCCccccCCceeEE---------EecCCCcccCceECCCCCEEEEEECC
Confidence 0011236799999999 777766 3 344567789999999999888754
Q ss_pred cC----ceEEEEEEECC-CC---ceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee
Q 004067 335 SQ----TKLKVLKFDIK-TG---QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG 406 (776)
Q Consensus 335 ~~----~~~~l~~~d~~-~g---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~ 406 (776)
.. ....|+++|++ +| +.+.++...... .....|+| +++++|+++.+|..+||++++++++.+
T Consensus 209 ~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~--~~~~~~sp--------dg~l~~~~~~~~~~~l~~~~~~~~~~~ 278 (662)
T 3azo_A 209 HPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA--IAQAEWAP--------DGSLIVATDRTGWWNLHRVDPATGAAT 278 (662)
T ss_dssp TTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC--EEEEEECT--------TSCEEEEECTTSSCEEEEECTTTCCEE
T ss_pred CCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce--EcceEECC--------CCeEEEEECCCCCeEEEEEECCCCcee
Confidence 42 34689999999 57 666776642211 11122333 334888888888889999999888888
Q ss_pred ccccCCeEEE--------EEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCE
Q 004067 407 PITEGDWMVE--------QIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRN 478 (776)
Q Consensus 407 ~lt~~~~~~~--------~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~ 478 (776)
+++.+...+. ....++++++ ++|.+.. +. .+||.+++ .+. .+++|+...+.....+++|++.
T Consensus 279 ~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~--~~l~~~d~--~~~----~~~~l~~~~~~~~~~~s~~~~~ 348 (662)
T 3azo_A 279 QLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GA--AVLGILDP--ESG----ELVDAAGPWTEWAATLTVSGTR 348 (662)
T ss_dssp ESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SS--CEEEEEET--TTT----EEEECCSSCCEEEEEEEEETTE
T ss_pred ecccccccccCccccccCceEeEeCCCE-EEEEEEc-Cc--cEEEEEEC--CCC----cEEEecCCCCeEEEEEecCCCE
Confidence 8877543321 1123667777 5666655 43 79999998 443 5677776654333222889999
Q ss_pred EEEEeeCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCceEEEEEcCCCcEEEEEEEcCCCCC---CCCCCce
Q 004067 479 FVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESR---YGPPPYK 555 (776)
Q Consensus 479 l~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~---~~~~~~p 555 (776)
+++.+++...|++||+++..+++. ++++.... ..+....+...+.+.+...+|..++++++.|++.. ...+++|
T Consensus 349 ~~~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~~--~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p 425 (662)
T 3azo_A 349 AVGVAASPRTAYEVVELDTVTGRA-RTIGARHT--DPVDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPP 425 (662)
T ss_dssp EEEEEEETTEEEEEEEEETTTCCE-EEEESCCC--CSSCGGGSCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCC
T ss_pred EEEEEcCCCCCCEEEEEECCCCce-EEeecCCc--ccCCccccCcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCcc
Confidence 999999999999999999977774 55654322 34556677789999999889999999999998642 0225789
Q ss_pred EEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCC
Q 004067 556 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 635 (776)
Q Consensus 556 ~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~i 635 (776)
+||++||+++.... ..+...++.|+++||+|+++|+||++++|..+.......++..+++|+.+++++++++..+
T Consensus 426 ~vv~~HG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 500 (662)
T 3azo_A 426 YVVMAHGGPTSRVP-----AVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTA 500 (662)
T ss_dssp EEEEECSSSSSCCC-----CSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSS
T ss_pred EEEEECCCCCccCc-----ccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCc
Confidence 99999998765431 2344567889999999999999999888888776665666667799999999999999888
Q ss_pred CCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccc--------cccccccCCCCCCccchhcCChhhhhc
Q 004067 636 KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT--------FYTEKYMGLPSEDPVGYEYSSVMHHVH 707 (776)
Q Consensus 636 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (776)
+.++++|+||||||++++.++.+ |++|+++++.+|+.++..+.. .+.+.+++.+....+.|...+++..+.
T Consensus 501 ~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 579 (662)
T 3azo_A 501 DRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRAD 579 (662)
T ss_dssp CTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGG
T ss_pred ChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhc
Confidence 99999999999999999998886 999999999999988653321 122333444445566777888999999
Q ss_pred cCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 708 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 708 ~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+++.|+|++||++|.++|+.++.+++++|++.+.+++++++++++|.+...+...++++.+.+||.++|
T Consensus 580 ~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 648 (662)
T 3azo_A 580 RVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVF 648 (662)
T ss_dssp GCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998666677899999999999875
No 7
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=3.1e-51 Score=474.96 Aligned_cols=578 Identities=15% Similarity=0.137 Sum_probs=415.1
Q ss_pred cCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEE
Q 004067 63 SPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKII 142 (776)
Q Consensus 63 SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l 142 (776)
+|||++++|.....+.....||+++..+++.++|++..
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~------------------------------------------ 117 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPN------------------------------------------ 117 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGG------------------------------------------
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHH------------------------------------------
Confidence 59999999999866654568999998877776666310
Q ss_pred EEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC------cEEEEecCCCceeEEeeCCCCCceec
Q 004067 143 MVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC------ELHVLNLLINEQRQLTHGANGNTVTH 216 (776)
Q Consensus 143 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~------~l~~~~l~~g~~~~lt~~~~~~~~~~ 216 (776)
.++......+..++|||||++|||..+. +|+++|+++|+..+++.....
T Consensus 118 --------------------~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~----- 172 (710)
T 2xdw_A 118 --------------------ILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVK----- 172 (710)
T ss_dssp --------------------GGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEEC-----
T ss_pred --------------------HhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcc-----
Confidence 1111111124568899999999988752 699999999998876543211
Q ss_pred CCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCc
Q 004067 217 GLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 296 (776)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 296 (776)
+..++|||||+.|+|.+.+...... .+. ........+|++|++.+++
T Consensus 173 -------------~~~~~wspDg~~l~~~~~~~~~~~~-----~~~---------------~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 173 -------------FSCMAWTHDGKGMFYNAYPQQDGKS-----DGT---------------ETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp -------------SCCEEECTTSSEEEEEECCCCSSCC-----SSS---------------CCCCCCCCEEEEEETTSCG
T ss_pred -------------cceEEEEeCCCEEEEEEECCccccc-----ccc---------------ccccCCCCEEEEEECCCCc
Confidence 2368899999999999865431100 000 0001122579999999887
Q ss_pred eE--EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCc-eEEEEEEECCC------C--ceEEEEEeccCceeec
Q 004067 297 VS--WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQT-KLKVLKFDIKT------G--QRKVILVEELDSWVNL 365 (776)
Q Consensus 297 ~~--~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~-~~~l~~~d~~~------g--~~~~l~~~~~~~~~~~ 365 (776)
.. .+... ..+......+.|||||++|++.+.+... ...|+++|+++ + ..+.++.+....+.
T Consensus 220 ~~~~~v~~~------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-- 291 (710)
T 2xdw_A 220 SEDILCAEF------PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-- 291 (710)
T ss_dssp GGCEEEECC------TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE--
T ss_pred ccceEEecc------CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE--
Confidence 32 33221 2234456789999999999888776543 67899999987 5 56777654433211
Q ss_pred ccccccCCCCccccCCeEEEEeccCC-ceEEEEEeCCCce---eeccccCCe--EEEEEEeecCCCcEEEEEEccCCCce
Q 004067 366 HDCFTPLDKGVTKYSGGFIWASEKTG-FRHLYLHDINGTC---LGPITEGDW--MVEQIVGVNEASGQVYFTGTLDGPLE 439 (776)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~s~~~g-~~~l~~~~~~g~~---~~~lt~~~~--~~~~~~~~s~dg~~i~~~~~~~~~~~ 439 (776)
.+ +.+++.+++.++.++ ..+|++++++++. .+.|+.+.. .+..+. |++ ++.+++....++.
T Consensus 292 --~~-------s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~-~~~-~~~lv~~~~~~g~-- 358 (710)
T 2xdw_A 292 --YV-------TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVA-CVR-SNFLVLCYLHDVK-- 358 (710)
T ss_dssp --EE-------EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEE-EET-TTEEEEEEEETTE--
T ss_pred --EE-------eccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEE-EEc-CCEEEEEEEECCE--
Confidence 12 334667888887644 6799999998764 356665532 444443 664 4557777766543
Q ss_pred eeEEEEEeCCCCCCccccceeecCCCC-eEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCce-eEeeccCCCchhhhh
Q 004067 440 SHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL-VLPLYEQPLTVPRIK 517 (776)
Q Consensus 440 ~~l~~~~~~~~g~~~~~~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~-~~~l~~~~~~~~~~~ 517 (776)
.+||.+++. +|+ ..+.|+...+ +..++++||++.+++.+++..+|+.||++|..+++. .+.+.... . ..++
T Consensus 359 ~~l~~~~~~-~g~----~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~-~-~~~~ 431 (710)
T 2xdw_A 359 NTLQLHDLA-TGA----LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVT-V-KGID 431 (710)
T ss_dssp EEEEEEETT-TCC----EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECC-C-TTCC
T ss_pred EEEEEEECC-CCC----EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecc-c-CCcC
Confidence 678888873 233 3466665444 456789999999999999999999999999988772 23343321 1 1233
Q ss_pred ccCCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECC
Q 004067 518 RLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDN 596 (776)
Q Consensus 518 ~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~ 596 (776)
...+ ..+.+.+++.||..++++++.|++.. ..++.|+||++||+++... .. .+......|++ +||+|+++|+
T Consensus 432 ~~~~-~~~~~~~~~~dg~~i~~~~~~p~~~~-~~~~~P~vl~~hGg~~~~~-~~----~~~~~~~~l~~~~G~~v~~~d~ 504 (710)
T 2xdw_A 432 ASDY-QTVQIFYPSKDGTKIPMFIVHKKGIK-LDGSHPAFLYGYGGFNISI-TP----NYSVSRLIFVRHMGGVLAVANI 504 (710)
T ss_dssp GGGE-EEEEEEEECTTSCEEEEEEEEETTCC-CSSCSCEEEECCCCTTCCC-CC----CCCHHHHHHHHHHCCEEEEECC
T ss_pred cccc-EEEEEEEEcCCCCEEEEEEEecCCCC-CCCCccEEEEEcCCCCCcC-CC----cccHHHHHHHHhCCcEEEEEcc
Confidence 3333 57889999999999999999998742 2357899999999876543 11 23333456667 9999999999
Q ss_pred CCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc
Q 004067 597 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 676 (776)
Q Consensus 597 rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~ 676 (776)
||+|+++..|........+...++|+.+++++|+++..++.++|+|+|+||||++++.++.++|++|+++|+.+|+.++.
T Consensus 505 rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~ 584 (710)
T 2xdw_A 505 RGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDML 584 (710)
T ss_dssp TTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTT
T ss_pred CCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHh
Confidence 99999998887765555556678999999999999988899999999999999999999999999999999999998875
Q ss_pred ccccc-----ccccccCCCCC--CccchhcCChhhhhc-----cCCC-cEEEEecCCCCccChHHHHHHHHHHHHC----
Q 004067 677 GYDTF-----YTEKYMGLPSE--DPVGYEYSSVMHHVH-----KMKG-KLLLVHGMIDENVHFRHTARLINALVAA---- 739 (776)
Q Consensus 677 ~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~i~~-P~lii~G~~D~~v~~~~~~~~~~~l~~~---- 739 (776)
.+... +...+ +.+.. ....+...+|+..+. +++. |+|++||.+|.+|++.++.+++++|++.
T Consensus 585 ~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~ 663 (710)
T 2xdw_A 585 KFHKYTIGHAWTTDY-GCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRS 663 (710)
T ss_dssp TGGGSTTGGGGHHHH-CCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTS
T ss_pred hccccCCChhHHHhC-CCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccc
Confidence 44221 11222 33321 112345667888888 7886 9999999999999999999999999987
Q ss_pred ---CCCeEEEEecCCCCCCCCC-CcHHHHHHHHHHHHHHhC
Q 004067 740 ---RKPYEILIFPDERHMPRRH-RDRIYMEERIWEFIERTL 776 (776)
Q Consensus 740 ---~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l 776 (776)
+.++++++++++||.+... ....+.++.+.+||.++|
T Consensus 664 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 704 (710)
T 2xdw_A 664 RKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCL 704 (710)
T ss_dssp TTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 8899999999999998543 345788999999998874
No 8
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=1.5e-52 Score=475.63 Aligned_cols=534 Identities=20% Similarity=0.225 Sum_probs=408.6
Q ss_pred cCCeeeEEEeecCCCceEEEEeC--CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC-------cEEE
Q 004067 124 GLGVTRYEWVKTSSKKKIIMVPL--PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC-------ELHV 194 (776)
Q Consensus 124 ~~~~~~~~~sp~~~dg~~l~~~~--~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~-------~l~~ 194 (776)
...+....||| ||++|+|.. ++.+.+|++++++.+ +++......+..+.|||| +++|+++. +||.
T Consensus 21 ~~~~~~~~~~~---DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVV---DGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEE---TTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCC---CCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC--eEEEEeccCCCCcceEEEE
Confidence 35688999999 999999973 677888888899888 888766434788999999 67787653 5888
Q ss_pred Eec--CCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcce
Q 004067 195 LNL--LINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQED 272 (776)
Q Consensus 195 ~~l--~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (776)
+++ +++.. +++.... ....+|||||+.++|.+....
T Consensus 95 ~~~~~~g~~~-~l~~~~~-------------------~~~~~~s~dg~~~~~~s~~~~---------------------- 132 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKP-------------------MRILSGVDTGEAVVFTGATED---------------------- 132 (582)
T ss_dssp EETTSTTCCE-ECTTSCS-------------------BEEEEEEECSSCEEEEEECSS----------------------
T ss_pred EeccCCCccc-cccCCCC-------------------ceeeeeCCCCCeEEEEecCCC----------------------
Confidence 888 54443 5543322 224579999999998874322
Q ss_pred ecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE
Q 004067 273 HAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 352 (776)
Q Consensus 273 ~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~ 352 (776)
.+.+||+++++.+++... .. ..++|||||+.|++.+.+..+...|++||+++|+.+
T Consensus 133 -------------~~~l~d~~~g~~~~l~~~---------~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 133 -------------RVALYALDGGGLRELARL---------PG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp -------------CEEEEEEETTEEEEEEEE---------SS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred -------------CceEEEccCCcEEEeecC---------CC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 134889999988877432 11 578999999999988876656677999999999998
Q ss_pred EEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEE-------EEeecCCC
Q 004067 353 VILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQ-------IVGVNEAS 425 (776)
Q Consensus 353 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~-------~~~~s~dg 425 (776)
.++.+.... ....|+| +++.++.++.+|..+||+||+++++.+.++.++..+.. ...|||||
T Consensus 189 ~l~~~~~~~---~~~~~Sp--------DG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 189 VFDSGEGSF---SSASISP--------GMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp EECCSSCEE---EEEEECT--------TSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred EeecCCCcc---ccceECC--------CCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC
Confidence 886554321 2234444 33345577778888999999999887744444322221 11299999
Q ss_pred cEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 004067 426 GQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 505 (776)
Q Consensus 426 ~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~ 505 (776)
.+++.+..++. .+||.+ |+ ... +....+..++|| ||+.+ +..++..+|+++++++..+ ..++
T Consensus 258 -~~~~~~~~~g~--~~l~~~-----g~-----~~~-~~~~~v~~~~~s-dg~~l-~~~s~~~~p~~l~~~d~~~--~~~~ 319 (582)
T 3o4h_A 258 -RLAVVARREGR--SAVFID-----GE-----RVE-APQGNHGRVVLW-RGKLV-TSHTSLSTPPRIVSLPSGE--PLLE 319 (582)
T ss_dssp -CEEEEEEETTE--EEEEET-----TE-----EEC-CCSSEEEEEEEE-TTEEE-EEEEETTEEEEEEEETTCC--EEEC
T ss_pred -cEEEEEEcCCc--EEEEEE-----CC-----eec-cCCCceEEEEec-CCEEE-EEEcCCCCCCeEEEEcCCC--ceEE
Confidence 68888877653 788887 21 221 122346678999 88655 6667788899999998744 3454
Q ss_pred eccCCCchhhhhccCCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHH
Q 004067 506 LYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR 585 (776)
Q Consensus 506 l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~ 585 (776)
+. ..+.+ +..+...+.+.+++.+|..++++++.|++.. ++.|+||++||+++... . ..+...++.|+
T Consensus 320 l~----~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~---~~~p~vv~~HG~~~~~~-~----~~~~~~~~~l~ 386 (582)
T 3o4h_A 320 GG----LPEDL-RRSIAGSRLVWVESFDGSRVPTYVLESGRAP---TPGPTVVLVHGGPFAED-S----DSWDTFAASLA 386 (582)
T ss_dssp CC----CCHHH-HHTEEEEEEEEEECTTSCEEEEEEEEETTSC---SSEEEEEEECSSSSCCC-C----SSCCHHHHHHH
T ss_pred Ee----cCCcc-ccccCcceEEEEECCCCCEEEEEEEcCCCCC---CCCcEEEEECCCccccc-c----cccCHHHHHHH
Confidence 51 11111 1456678999999999999999999998742 47899999999876643 1 23455688999
Q ss_pred hCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEE
Q 004067 586 SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 665 (776)
Q Consensus 586 ~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~ 665 (776)
++||+|+++|+||++++|..+.......++...++|+.++++++.++..++ +++|+||||||++++.++.++|+++++
T Consensus 387 ~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~ 464 (582)
T 3o4h_A 387 AAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKA 464 (582)
T ss_dssp HTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSC
T ss_pred hCCCEEEEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEE
Confidence 999999999999999999887776666666777999999999999987666 999999999999999999999999999
Q ss_pred EEEcCCCCCccccccc-------ccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHH
Q 004067 666 AVSGAPVTSWDGYDTF-------YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 738 (776)
Q Consensus 666 ~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 738 (776)
+++.+|+.++..+... +.+.+++ .....+...+++..+.++++|+|++||++|.++|+.++.++++++++
T Consensus 465 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 541 (582)
T 3o4h_A 465 GVAGASVVDWEEMYELSDAAFRNFIEQLTG---GSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLA 541 (582)
T ss_dssp EEEESCCCCHHHHHHTCCHHHHHHHHHHTT---TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred EEEcCCccCHHHHhhcccchhHHHHHHHcC---cCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHh
Confidence 9999999887543211 2233333 45567788899999999999999999999999999999999999999
Q ss_pred CCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 739 ARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 739 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
.+.+++++++|+++|.+...+...++++.+.+||+++|
T Consensus 542 ~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l 579 (582)
T 3o4h_A 542 RGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQR 579 (582)
T ss_dssp TTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHc
Confidence 99999999999999998666778899999999999875
No 9
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=2.2e-50 Score=466.34 Aligned_cols=573 Identities=15% Similarity=0.138 Sum_probs=412.3
Q ss_pred eEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCce
Q 004067 61 GFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKK 140 (776)
Q Consensus 61 ~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~ 140 (776)
..+|||++|+|.+...+.....||+++..+++.++|++.+. ++.
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~------------------------------~a~------ 117 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNG------------------------------WSK------ 117 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGG------------------------------SSS------
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHH------------------------------hcc------
Confidence 34699999999998766545789999988888877774111 000
Q ss_pred EEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC------CcEEEEecCCCceeEEeeCCCCCce
Q 004067 141 IIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD------CELHVLNLLINEQRQLTHGANGNTV 214 (776)
Q Consensus 141 ~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~------~~l~~~~l~~g~~~~lt~~~~~~~~ 214 (776)
.....+..++|||||++|||..+ ..|+++|+++|+..+......
T Consensus 118 --------------------------~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~---- 167 (695)
T 2bkl_A 118 --------------------------DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG---- 167 (695)
T ss_dssp --------------------------SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC----
T ss_pred --------------------------CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc----
Confidence 00012456788888888888864 369999999998641111000
Q ss_pred ecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC
Q 004067 215 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG 294 (776)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 294 (776)
.. ...++|||||+.|+|.+.+...... . .+.....+|++|++.+
T Consensus 168 ---~~----------~~~~~wspDg~~l~~~~~d~~~~~~---------------~--------~~~~~~~~v~~~~l~t 211 (695)
T 2bkl_A 168 ---GK----------YATPKWTPDSKGFYYEWLPTDPSIK---------------V--------DERPGYTTIRYHTLGT 211 (695)
T ss_dssp ---CT----------TCCCEECTTSSEEEEEECCCCTTSC---------------G--------GGGGGGCEEEEEETTS
T ss_pred ---cc----------ccceEEecCCCEEEEEEecCCCCCc---------------c--------ccCCCCCEEEEEECCC
Confidence 00 1367899999999999865431000 0 0001125799999998
Q ss_pred Cce--EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccC
Q 004067 295 GPV--SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPL 372 (776)
Q Consensus 295 ~~~--~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~ 372 (776)
++. ..+... ..+...+..+.|||||++|++.+........||+++..+++.+.++......+...
T Consensus 212 ~~~~~~lv~~~------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~------- 278 (695)
T 2bkl_A 212 EPSKDTVVHER------TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVH------- 278 (695)
T ss_dssp CGGGCEEEECC------CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEE-------
T ss_pred CchhceEEEec------CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEE-------
Confidence 873 333221 23335677899999999888887665456789999988888888887654322211
Q ss_pred CCCccccCCeEEEEeccC-CceEEEEEeCCCcee---eccccC--CeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 373 DKGVTKYSGGFIWASEKT-GFRHLYLHDINGTCL---GPITEG--DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 373 ~~~~~~~~~~~~~~s~~~-g~~~l~~~~~~g~~~---~~lt~~--~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
..+++ +++.++.+ +...|+++++++++. +.++.+ +..+..+. ++ ++.+++....++. .+||.++
T Consensus 279 ----~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~-~~--~~~lv~~~~~dg~--~~l~~~~ 348 (695)
T 2bkl_A 279 ----AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS-IV--GGHLSLEYLKDAT--SEVRVAT 348 (695)
T ss_dssp ----EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE-EE--TTEEEEEEEETTE--EEEEEEE
T ss_pred ----ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE-EE--CCEEEEEEEECCE--EEEEEEe
Confidence 11344 77777654 467999999987653 556554 33444443 55 4567777766653 7899999
Q ss_pred eCCCCCCccccceeecCC-CC-eEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCc
Q 004067 447 LYPDWNHTLEAPVKLTNG-KG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPP 524 (776)
Q Consensus 447 ~~~~g~~~~~~~~~l~~~-~~-~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 524 (776)
+ .|+ ..+.+... .+ +..++++||++.+++.+++..+|+.||++|..+++. +.+..... .++... ...
T Consensus 349 ~--~g~----~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~-~~l~~~~~---~~~~~~-~~~ 417 (695)
T 2bkl_A 349 L--KGK----PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS-ELWAKVDV---PMNPEQ-YQV 417 (695)
T ss_dssp T--TCC----EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE-EEEEECCC---SSCGGG-EEE
T ss_pred C--CCC----eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEecCCC---CCCHHH-CeE
Confidence 7 453 34555533 23 345688999999999999999999999999988873 44443221 133322 367
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCch
Q 004067 525 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 604 (776)
Q Consensus 525 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~ 604 (776)
+.+.+++.||..++++++.|++.. ..++.|+||++||+++... .. .+......|+++||+|+++|+||+|++|.
T Consensus 418 ~~~~~~~~dg~~i~~~~~~p~~~~-~~~~~p~vl~~hGg~~~~~-~~----~~~~~~~~l~~~G~~v~~~d~rG~g~~g~ 491 (695)
T 2bkl_A 418 EQVFYASKDGTKVPMFVVHRKDLK-RDGNAPTLLYGYGGFNVNM-EA----NFRSSILPWLDAGGVYAVANLRGGGEYGK 491 (695)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCC-CSSCCCEEEECCCCTTCCC-CC----CCCGGGHHHHHTTCEEEEECCTTSSTTCH
T ss_pred EEEEEECCCCCEEEEEEEECCCCC-CCCCccEEEEECCCCcccc-CC----CcCHHHHHHHhCCCEEEEEecCCCCCcCH
Confidence 889999999999999999998742 2257899999999876643 11 23334566888999999999999999998
Q ss_pred hhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc---
Q 004067 605 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF--- 681 (776)
Q Consensus 605 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~--- 681 (776)
.|............++|+.+++++|+++..++.++|+|+|+||||++++.++.++|++|+++|+.+|+.++..+...
T Consensus 492 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~ 571 (695)
T 2bkl_A 492 AWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSG 571 (695)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTG
T ss_pred HHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCC
Confidence 88776655555667899999999999998889999999999999999999999999999999999999887654321
Q ss_pred --ccccccCCCCCC--ccchhcCChhhhhccCC--CcEEEEecCCCCccChHHHHHHHHHHHH---CCCCeEEEEecCCC
Q 004067 682 --YTEKYMGLPSED--PVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVA---ARKPYEILIFPDER 752 (776)
Q Consensus 682 --~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~v~~~~~~~~~~~l~~---~~~~~~~~~~~~~~ 752 (776)
+...+ +.+... ...+...+|+..+.+++ +|+|++||.+|.+|++.++.+++++|++ .+.++++++++++|
T Consensus 572 ~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g 650 (695)
T 2bkl_A 572 RTWIPEY-GTAEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAG 650 (695)
T ss_dssp GGGHHHH-CCTTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCB
T ss_pred cchHHHh-CCCCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCC
Confidence 11222 333211 12345667888888776 6999999999999999999999999998 67899999999999
Q ss_pred CCCCC-CCcHHHHHHHHHHHHHHhC
Q 004067 753 HMPRR-HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 753 H~~~~-~~~~~~~~~~~~~fl~~~l 776 (776)
|.+.. .....+.+..+.+||.++|
T Consensus 651 H~~~~~~~~~~~~~~~~~~fl~~~l 675 (695)
T 2bkl_A 651 HGGADQVAKAIESSVDLYSFLFQVL 675 (695)
T ss_dssp TTBCSCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 98743 3446778899999999875
No 10
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=4.1e-50 Score=467.18 Aligned_cols=572 Identities=14% Similarity=0.133 Sum_probs=403.4
Q ss_pred eeEcCCCCEEEEEeCCCCcCcceEEEEecC---CCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 60 IGFSPDDNLITYLLSPDHSLSRKVFSFDPK---TCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 60 ~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~---~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
...+|||++++|.+...+.....||+++.. +++.++|++...
T Consensus 112 ~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~----------------------------------- 156 (741)
T 1yr2_A 112 GLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNT----------------------------------- 156 (741)
T ss_dssp CCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGG-----------------------------------
T ss_pred CCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHH-----------------------------------
Confidence 345699999999998766545789999987 777777764110
Q ss_pred CCceEEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC------cEEEEecCCCceeEEeeCCC
Q 004067 137 SKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC------ELHVLNLLINEQRQLTHGAN 210 (776)
Q Consensus 137 ~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~------~l~~~~l~~g~~~~lt~~~~ 210 (776)
++......+..++|||||++|||..+. +|+++|+++|+....+....
T Consensus 157 ---------------------------l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~ 209 (741)
T 1yr2_A 157 ---------------------------WAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV 209 (741)
T ss_dssp ---------------------------CC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE
T ss_pred ---------------------------hccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc
Confidence 110000124557888888888888752 59999999998766532211
Q ss_pred CCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEE
Q 004067 211 GNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVV 290 (776)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~ 290 (776)
. +..++|||| +.|+|.+.+....... + .+.+...+|+++
T Consensus 210 ~------------------~~~~~wspD-~~l~~~~~~~~~~~~~-~---------------------~~~~~~~~v~~~ 248 (741)
T 1yr2_A 210 K------------------FSGLAWLGN-DALLYSRFAEPKEGQA-F---------------------QALNYNQTVWLH 248 (741)
T ss_dssp E------------------SCCCEESTT-SEEEEEECCCC------------------------------CCCCCEEEEE
T ss_pred e------------------eccEEEECC-CEEEEEEecCcccccc-c---------------------ccCCCCCEEEEE
Confidence 0 236789999 9999988654310000 0 001112568999
Q ss_pred EcCCCce--EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecC-ceEEEEEEECCCC--c-eEEEEEeccCceee
Q 004067 291 SAAGGPV--SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKTG--Q-RKVILVEELDSWVN 364 (776)
Q Consensus 291 d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~~l~~~d~~~g--~-~~~l~~~~~~~~~~ 364 (776)
++.+++. ..+... ......+..+.|||||++|++...+.. ....|+++|++++ + .+.|+......+..
T Consensus 249 ~lgt~~~~~~lv~~~------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 249 RLGTPQSADQPVFAT------PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp ETTSCGGGCEEEECC------TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred ECCCCchhCEEEecc------CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 9988763 233221 222335778999999998888876542 3568999999988 6 77776554332211
Q ss_pred cccccccCCCCccccCCeEEEEeccCC-ceEEEEEeCCC--ceeeccccCCe-EEEEEEeecCCCcEEEEEEccCCCcee
Q 004067 365 LHDCFTPLDKGVTKYSGGFIWASEKTG-FRHLYLHDING--TCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLES 440 (776)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~s~~~g-~~~l~~~~~~g--~~~~~lt~~~~-~~~~~~~~s~dg~~i~~~~~~~~~~~~ 440 (776)
+ ..+++.+++.++.++ ..+|+++++++ ++.+.++.+.. .+..+ .++ ++.+++....++. .
T Consensus 323 ----~-------~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~-~~~--~~~lv~~~~~dg~--~ 386 (741)
T 1yr2_A 323 ----V-------DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESV-GIA--GNRLFASYIHDAK--S 386 (741)
T ss_dssp ----E-------EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEE-EEE--BTEEEEEEEETTE--E
T ss_pred ----E-------eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEE-EEE--CCEEEEEEEECCE--E
Confidence 1 234666888887643 67999999987 35666665533 33333 244 6678888776653 7
Q ss_pred eEEEEEeCCCCCCccccceeecCC--CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhc
Q 004067 441 HLYCAKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKR 518 (776)
Q Consensus 441 ~l~~~~~~~~g~~~~~~~~~l~~~--~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 518 (776)
+||.+++ +|+ ..+.|+.. ..+..++++||++.|++.+++..+|++||++|..+++ .+.+.. ... .++.
T Consensus 387 ~l~~~~~--~g~----~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l~~-~~~--~~~~ 456 (741)
T 1yr2_A 387 QVLAFDL--DGK----PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPWEP-VHL--TFDP 456 (741)
T ss_dssp EEEEEET--TSC----EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEECSC-CCC--SSCG
T ss_pred EEEEEeC--CCC----ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEEec-CCC--CCCh
Confidence 8999997 454 45566532 2356779999999999999999999999999998877 344433 221 2333
Q ss_pred cCCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCC
Q 004067 519 LQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG 598 (776)
Q Consensus 519 ~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg 598 (776)
.. ...+.+.+++.||..++++++.|++. .++.|+||++||+++... . ..+......|+++||+|+++|+||
T Consensus 457 ~~-~~~~~~~~~~~dg~~i~~~~~~p~~~---~~~~p~vl~~hGg~~~~~-~----~~~~~~~~~l~~~G~~v~~~d~rG 527 (741)
T 1yr2_A 457 AD-FRVEQVFYPSKDGTKVPMFIVRRKDA---KGPLPTLLYGYGGFNVAL-T----PWFSAGFMTWIDSGGAFALANLRG 527 (741)
T ss_dssp GG-EEEEEEEEECTTSCEEEEEEEEETTC---CSCCCEEEECCCCTTCCC-C----CCCCHHHHHHHTTTCEEEEECCTT
T ss_pred hH-CEEEEEEEEcCCCCEEEEEEEecCCC---CCCCcEEEEECCCCCccC-C----CCcCHHHHHHHHCCcEEEEEecCC
Confidence 23 36788999999999999999999863 257899999999876543 1 123334567889999999999999
Q ss_pred CCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc
Q 004067 599 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 678 (776)
Q Consensus 599 ~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 678 (776)
+|++|..|........+...++|+.+++++|+++..+++++|+|+|+||||++++.++.++|++|+++|+.+|+.++..+
T Consensus 528 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~ 607 (741)
T 1yr2_A 528 GGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRF 607 (741)
T ss_dssp SSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSG
T ss_pred CCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccc
Confidence 99999888776555555567899999999999998889999999999999999999999999999999999999887654
Q ss_pred ccc-----ccccccCCCCC--CccchhcCChhhhhcc-CC-CcEEEEecCCCCccChHHHHHHHHHHHH---CCCCeEEE
Q 004067 679 DTF-----YTEKYMGLPSE--DPVGYEYSSVMHHVHK-MK-GKLLLVHGMIDENVHFRHTARLINALVA---ARKPYEIL 746 (776)
Q Consensus 679 ~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~-i~-~P~lii~G~~D~~v~~~~~~~~~~~l~~---~~~~~~~~ 746 (776)
... +...+ +.+.. ....+...+|+..+.+ ++ .|+|++||.+|.+|++.++.+++++|+. .+.+++++
T Consensus 608 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~ 686 (741)
T 1yr2_A 608 DQFTAGRYWVDDY-GYPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIR 686 (741)
T ss_dssp GGSTTGGGGHHHH-CCTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEE
T ss_pred cCCCCCchhHHHc-CCCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEE
Confidence 321 11112 33321 1133457788888887 88 4999999999999999999999999999 88899999
Q ss_pred EecCCCCCCCCC-CcHHHHHHHHHHHHHHhC
Q 004067 747 IFPDERHMPRRH-RDRIYMEERIWEFIERTL 776 (776)
Q Consensus 747 ~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l 776 (776)
+++++||.+... ....++...+.+||.++|
T Consensus 687 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 717 (741)
T 1yr2_A 687 IETRAGHGSGKPIDKQIEETADVQAFLAHFT 717 (741)
T ss_dssp EC---------CHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 999999987443 334688899999998864
No 11
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=1.2e-48 Score=450.40 Aligned_cols=523 Identities=14% Similarity=0.117 Sum_probs=384.4
Q ss_pred ccCceeCCCCCEEEEEECC------cEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEE
Q 004067 172 VIDPHLSSDGTMIAFVRDC------ELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFT 245 (776)
Q Consensus 172 ~~~~~~SpDg~~la~~~~~------~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~ 245 (776)
+..+.|||||++|||..+. .|+++|+++|+..+++..... ...++|| ||+.|+|.
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k------------------~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVK------------------FSGISWL-GNEGFFYS 191 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEE------------------SCCCEEE-TTTEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCce------------------eccEEEe-CCCEEEEE
Confidence 5567899999999998752 599999999997765432210 2367899 99999999
Q ss_pred EecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCce--EEEEcccCCCCCCC-CcceEEEEEec
Q 004067 246 QVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV--SWMDLQCGGTDQNY-DEEYLARVNWM 322 (776)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~-~~~~~~~~~~S 322 (776)
+.+..... .+. ..+...+|+++++.++.. ..+... .. +......+.||
T Consensus 192 ~~~~~~~~--~~~---------------------~~~~~~~v~~~~lgt~~~~~~~v~~~------~~~~~~~~~~~~~S 242 (693)
T 3iuj_A 192 SYDKPDGS--ELS---------------------ARTDQHKVYFHRLGTAQEDDRLVFGA------IPAQHHRYVGATVT 242 (693)
T ss_dssp ESSCCC------------------------------CCCCEEEEEETTSCGGGCEEEESC------SGGGCCSEEEEEEC
T ss_pred EecCcccc--ccc---------------------ccCCCcEEEEEECCCCcccceEEEec------CCCCCeEEEEEEEc
Confidence 86532100 000 001125689999987653 334221 22 23346779999
Q ss_pred cCCeEEEEEEeecCceEEEEEEECCCC--ceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCC-ceEEEEEe
Q 004067 323 HGNILTAQVLNRSQTKLKVLKFDIKTG--QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG-FRHLYLHD 399 (776)
Q Consensus 323 pDg~~l~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g-~~~l~~~~ 399 (776)
|||++|++....+.....||++|++++ ..+.++......+. + ++.+++.++|.++.++ ..+|+.++
T Consensus 243 pDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-------~----~~~~g~~l~~~t~~~~~~~~l~~~d 311 (693)
T 3iuj_A 243 EDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS-------L----VDNKGSTLYLLTNRDAPNRRLVTVD 311 (693)
T ss_dssp TTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE-------E----EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred CCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE-------E----EeccCCEEEEEECCCCCCCEEEEEe
Confidence 999988888776655568999999877 56777655433221 1 1334677888887654 56999999
Q ss_pred CCCcee---eccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCC--CeEEEEEcC
Q 004067 400 INGTCL---GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK--GKHVAVLDH 474 (776)
Q Consensus 400 ~~g~~~---~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~--~~~~~~~sp 474 (776)
++++.. +.|+.+...+. .|+++|++|++....++. .+|+.+++ +|. ..+.|+... .+..++++|
T Consensus 312 ~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g~--~~l~~~d~--~g~----~~~~l~~p~~~~~~~~~~~~ 380 (693)
T 3iuj_A 312 AANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDAT--ARVEQFDY--EGK----RVREVALPGLGSVSGFNGKH 380 (693)
T ss_dssp TTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEETTE--EEEEEECT--TSC----EEEEECCSSSSEEEECCCCT
T ss_pred CCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEECCe--eEEEEEEC--CCC----eeEEeecCCCceEEeeecCC
Confidence 988764 56666544333 589999999998877653 57888887 454 445554322 244568889
Q ss_pred CcCEEEEEeeCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCc
Q 004067 475 NMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPY 554 (776)
Q Consensus 475 dg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~ 554 (776)
|++.|++..++..+|+.|+.+|..+++. +.+..... .++...+ ..+.+.+++.||..++++++.|++. ...++.
T Consensus 381 d~~~l~~~~ss~~tP~~l~~~d~~~g~~-~~l~~~~~---~~~~~~~-~~~~~~~~~~dg~~i~~~l~~p~~~-~~~~~~ 454 (693)
T 3iuj_A 381 DDPALYFGFENYAQPPTLYRFEPKSGAI-SLYRASAA---PFKPEDY-VSEQRFYQSKDGTRVPLIISYRKGL-KLDGSN 454 (693)
T ss_dssp TCSCEEEEEECSSSCCEEEEECTTTCCE-EEEECCCS---SCCGGGE-EEEEEEEECTTSCEEEEEEEEESSC-CCSSCC
T ss_pred CCCEEEEEecCCCCCCEEEEEECCCCeE-EEEEeCCC---CcChhhC-eeEEEEEecCCCcEEEEEEEecCCC-CCCCCc
Confidence 9999999999999999999999988764 44543322 2333333 5788999999999999999999864 223578
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 634 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 634 (776)
|+||++||+++... . ..+...+..|+++||+|+++|+||+|++|..|........+...++|+.+++++|+++..
T Consensus 455 P~ll~~hGg~~~~~-~----~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 529 (693)
T 3iuj_A 455 PTILYGYGGFDVSL-T----PSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGY 529 (693)
T ss_dssp CEEEECCCCTTCCC-C----CCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTS
T ss_pred cEEEEECCCCCcCC-C----CccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Confidence 99999999876543 1 233344667888999999999999999999888776666666678999999999999988
Q ss_pred CCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc-----ccccccCCCCCCcc---chhcCChhhhh
Q 004067 635 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF-----YTEKYMGLPSEDPV---GYEYSSVMHHV 706 (776)
Q Consensus 635 id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~ 706 (776)
+|+++|+|+|+||||++++.++.++|++|+++|+.+|+.++..+... +... ++.+..... .+...+|+..+
T Consensus 530 ~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~~sp~~~~ 608 (693)
T 3iuj_A 530 TRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYD-YGTSADSEAMFDYLKGYSPLHNV 608 (693)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHH-HCCTTSCHHHHHHHHHHCHHHHC
T ss_pred CCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHH-cCCccCHHHHHHHHHhcCHHHhh
Confidence 99999999999999999999999999999999999999987654321 1111 244433322 35577899999
Q ss_pred cc-CCCc-EEEEecCCCCccChHHHHHHHHHHHHC---CCCeEEEEecCCCCCCCCC-CcHHHHHHHHHHHHHHhC
Q 004067 707 HK-MKGK-LLLVHGMIDENVHFRHTARLINALVAA---RKPYEILIFPDERHMPRRH-RDRIYMEERIWEFIERTL 776 (776)
Q Consensus 707 ~~-i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~---~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l 776 (776)
.+ ++.| +|++||.+|.+|++.++.+++++|++. +.++++++++++||.+... ....+.++.+.+||.++|
T Consensus 609 ~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 684 (693)
T 3iuj_A 609 RPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEM 684 (693)
T ss_dssp CTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHc
Confidence 88 8887 999999999999999999999999988 4789999999999998553 567788899999999876
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=7.2e-47 Score=437.45 Aligned_cols=520 Identities=14% Similarity=0.121 Sum_probs=369.5
Q ss_pred ccCceeC-CCCCEEEEEECC------cEEEEecCCC-ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEE
Q 004067 172 VIDPHLS-SDGTMIAFVRDC------ELHVLNLLIN-EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIA 243 (776)
Q Consensus 172 ~~~~~~S-pDg~~la~~~~~------~l~~~~l~~g-~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~ 243 (776)
...+.|| |||++|||+.+. +||++++++| +. +.. . +... ...++|||||+.|+
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~-~----~~~~------------~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD-K----VSGT------------NGEIVWGPDHTSLF 236 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC-C----EEEE------------CSCCEECSSTTEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc-c----ccCc------------eeeEEEecCCCEEE
Confidence 4567899 999999998753 3999999998 62 110 0 0000 23678999999999
Q ss_pred EEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceE--EEEcccCCCCCCCCcceEEEEEe
Q 004067 244 FTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVS--WMDLQCGGTDQNYDEEYLARVNW 321 (776)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~ 321 (776)
|.+.+... ...+|+++++.+++.. .+.. .........+.|
T Consensus 237 y~~~d~~~-------------------------------~~~~v~~~~lgt~~~~~~lv~~-------~~~~~~~~~~~~ 278 (751)
T 2xe4_A 237 YVTKDETL-------------------------------RENKVWRHVMGKLQSEDVCLYE-------EHNPLFSAFMYK 278 (751)
T ss_dssp EEEECTTC-------------------------------CEEEEEEEETTSCGGGCEEEEE-------CCCTTCEEEEEE
T ss_pred EEEECCCC-------------------------------CCCEEEEEECCCCchhcEEEEe-------cCCCceEEEEEE
Confidence 99864321 1147899999887532 2211 112234568899
Q ss_pred ccCCeEEEEEEeecCceEEEEEEECCCC--ce--EEEEEeccCceeecccccccCCCCccccCCeEEEEeccC--CceEE
Q 004067 322 MHGNILTAQVLNRSQTKLKVLKFDIKTG--QR--KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT--GFRHL 395 (776)
Q Consensus 322 SpDg~~l~~~~~~~~~~~~l~~~d~~~g--~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--g~~~l 395 (776)
||||++|++..... ....||++|++++ +. +.++..... ..|++. -..++.++|.++.+ +..+|
T Consensus 279 SpDg~~l~~~~~~~-~~~~l~~~d~~~~~~~~~~~~l~~~~~~------~~~s~~----~~~g~~l~~~t~~~~a~~~~L 347 (751)
T 2xe4_A 279 AADTNTLCIGSQSP-ETAEVHLLDLRKGNAHNTLEIVRPREKG------VRYDVQ----MHGTSHLVILTNEGGAVNHKL 347 (751)
T ss_dssp CTTSSEEEEEEECS-SCEEEEEEESSSCTTCCCEEESSCCCTT------CCEEEE----EETTTEEEEEECTTTCTTCEE
T ss_pred CCCCCEEEEEecCC-CCceEEEEECCCCCCCceeEEeecCCCC------ceEEEe----eeeCCEEEEEeCCCCCCCcEE
Confidence 99999888887654 5678999999886 34 555433211 112221 01256788888875 67899
Q ss_pred EEEeCCC-ceeec-cccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCC-----CCCCcccc-ceeecCCCCe
Q 004067 396 YLHDING-TCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP-----DWNHTLEA-PVKLTNGKGK 467 (776)
Q Consensus 396 ~~~~~~g-~~~~~-lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~-----~g~~~~~~-~~~l~~~~~~ 467 (776)
|++++++ ++.+. +..+...+ .+..++.+++.|++....++. .+|+.+++.. .+. . .+.|+.....
T Consensus 348 ~~~d~~~~~~~~~~li~~~~~~-~l~~~~~~~~~lv~~~~~~g~--~~l~~~dl~~~~~~~~~g----~~~~~l~l~~~~ 420 (751)
T 2xe4_A 348 LIAPRGQPSDWSHVLVDHSEDV-FMESIAVRSNYLVVAGRRAGL--TRIWTMMADSQDGVFKAG----TGLREVVMEEPI 420 (751)
T ss_dssp EEEETTSTTCCCCEEECCCSSE-EEEEEEECSSEEEEEEEETTE--EEEEEEECCTTTSCCCTT----TCCEECCCCCSS
T ss_pred EEEcCCCcccceeeEECCCCCc-EEEEEEEECCEEEEEEEeCCE--EEEEEEecccccccccCC----ccceEECCCCce
Confidence 9999886 45455 44443322 122355567889999887654 6788888510 122 3 5566433322
Q ss_pred EEEEE------cCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCceEEEEEcCCCcEEEEEE
Q 004067 468 HVAVL------DHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGAL 541 (776)
Q Consensus 468 ~~~~~------spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 541 (776)
..+.+ ++|++.+++.+++..+|++++.++..+++. +.+..... ...++...+ ..+.+.+++.||..+++++
T Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~-~~l~~~~~-~~~~~~~~~-~~~~~~~~s~dG~~i~~~l 497 (751)
T 2xe4_A 421 FTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR-TAVKVREV-GGGFDAANY-KVERRFATAPDQTKIPLSV 497 (751)
T ss_dssp CEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE-EEEEECCC-CTTCCGGGE-EEEEEEEECTTCCEEEEEE
T ss_pred eEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE-EEEecccc-ccCCCccce-EEEEEEEECCCCcEEEEEE
Confidence 23344 579999999999999999999999988763 44543321 112333334 4788999999999999999
Q ss_pred EcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhh-hhhhccCCccHH
Q 004067 542 YKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA-SIKHNCGRIDAE 620 (776)
Q Consensus 542 ~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~-~~~~~~~~~~~~ 620 (776)
+.|++.. ..++.|+||++||+++... .. .|...+..|+++||+|+++|+||+|++|..|.. ......+...++
T Consensus 498 ~~p~~~~-~~~~~P~vl~~HGg~~~~~-~~----~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~ 571 (751)
T 2xe4_A 498 VYHKDLD-MSQPQPCMLYGYGSYGLSM-DP----QFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFS 571 (751)
T ss_dssp EEETTSC-TTSCCCEEEECCCCTTCCC-CC----CCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHH
T ss_pred EcCCCCC-CCCCccEEEEECCCCCcCC-CC----cchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHH
Confidence 9998742 2257899999999877543 12 233346788899999999999999999988877 655555667799
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-----cccccc--ccCCCCCC
Q 004067 621 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-----TFYTEK--YMGLPSED 693 (776)
Q Consensus 621 D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-----~~~~~~--~~~~~~~~ 693 (776)
|+.+++++|+++..+|.+||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+. ...... ..+.+ ..
T Consensus 572 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~p-~~ 650 (751)
T 2xe4_A 572 DFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTTGEWEEWGNP-NE 650 (751)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHHHHTTTTCCT-TS
T ss_pred HHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcccCcccchhhHHHcCCC-CC
Confidence 99999999999988899999999999999999999999999999999999998875431 000001 12333 22
Q ss_pred cc---chhcCChhhhhccCCCc-EEEEecCCCCccChHHHHHHHHHHHHCC---CCeEEEEecCCCCCCCCCC-cHHHHH
Q 004067 694 PV---GYEYSSVMHHVHKMKGK-LLLVHGMIDENVHFRHTARLINALVAAR---KPYEILIFPDERHMPRRHR-DRIYME 765 (776)
Q Consensus 694 ~~---~~~~~~~~~~~~~i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~-~~~~~~ 765 (776)
.+ .+...+|+..+.+++.| +|++||++|.+|++.++.+++++|++.+ ..+.+.++++++|.+.... ...+..
T Consensus 651 ~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 730 (751)
T 2xe4_A 651 YKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKES 730 (751)
T ss_dssp HHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHH
T ss_pred HHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHH
Confidence 22 34566888888899987 9999999999999999999999999884 4566777799999985432 445667
Q ss_pred HHHHHHHHHhC
Q 004067 766 ERIWEFIERTL 776 (776)
Q Consensus 766 ~~~~~fl~~~l 776 (776)
..+.+||.++|
T Consensus 731 ~~~~~Fl~~~l 741 (751)
T 2xe4_A 731 AIQQAFVCKHL 741 (751)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 78999999875
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=7.9e-37 Score=343.83 Aligned_cols=522 Identities=14% Similarity=0.083 Sum_probs=351.8
Q ss_pred eCCCCCEEEEEECC------cEEEEecCCCceeEEeeCCCCCceecC-CcccceecccCCcceEEECCCCCeEEEEEecC
Q 004067 177 LSSDGTMIAFVRDC------ELHVLNLLINEQRQLTHGANGNTVTHG-LAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDS 249 (776)
Q Consensus 177 ~SpDg~~la~~~~~------~l~~~~l~~g~~~~lt~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 249 (776)
+||||+++++.... .+.++|+++++... ++-. ....+ .-.| .++..++|- |.+.++|.+...
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~---~~~~-~~~k~~~~~~------~~~~~~~W~-d~~~~~~~~~~~ 205 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK---NGFE-PITNSGKLLE------GKFTYPTWI-NKDTIIFNLVLH 205 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT---TCSC-CBCTTCCBCC------EETCCEEEE-ETTEEEECCCCS
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC---CCcc-cccccccccc------cccceeeEE-CCCEEEEEeCCC
Confidence 89999999997542 48999999887531 1100 00000 0000 012345897 677777754322
Q ss_pred CCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCc--eEEEEcccCCCCCCCCcceEEEEEeccCCeE
Q 004067 250 SEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP--VSWMDLQCGGTDQNYDEEYLARVNWMHGNIL 327 (776)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~ 327 (776)
.. . +. ++.-..+++.|-+-+.. -..+-.. ... .....+.-++|++.
T Consensus 206 ~~-~---~~---------------------~~~~~~~v~~~~~Gt~~~~~~~v~~~------~~~-~~~~~~~~~~~~~~ 253 (711)
T 4hvt_A 206 KN-E---IT---------------------SSLYPNSLYIWKRGESIEKAKKLFEV------PKE-YIYVSAGKLLSDTI 253 (711)
T ss_dssp TT-C---BC---------------------TTSSBCEEEEEETTSCGGGCEEEEEC------CTT-SCEEEEEESSCTTT
T ss_pred CC-C---cC---------------------cCCCCCEEEEEECCCChHHCeEEecc------CCC-ceEEEEEEecCCCc
Confidence 11 0 00 00011456777766543 2222111 111 22344667888773
Q ss_pred ----EEEEEeecCceEEEEEEECCC--CceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccC--------Cce
Q 004067 328 ----TAQVLNRSQTKLKVLKFDIKT--GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT--------GFR 393 (776)
Q Consensus 328 ----l~~~~~~~~~~~~l~~~d~~~--g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--------g~~ 393 (776)
+++....+.....+|+.|++. ++...|....+.... ...++.+++....+ ...
T Consensus 254 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (711)
T 4hvt_A 254 SSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDATLQ-------------GSFKEYVFWLLRSDWKFKSHNIKAG 320 (711)
T ss_dssp CSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCEEE-------------EEETTEEEEECSSCEEETTEEECTT
T ss_pred eEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcceEe-------------eeECCEEEEEECcccccccccCCCC
Confidence 444444344557899998764 554555222211100 11144555543221 234
Q ss_pred EEEEEeCCCc--------eeec-cccCC-eEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCcccccee---
Q 004067 394 HLYLHDINGT--------CLGP-ITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVK--- 460 (776)
Q Consensus 394 ~l~~~~~~g~--------~~~~-lt~~~-~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~--- 460 (776)
.|+.+++++. +.+. ++... ..+.++. |..+ .+++....++. ..|+.+++. +|. ...+.
T Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~--~l~~~~~~~~~--~~l~~~~~~-~g~---~~~~~~i~ 391 (711)
T 4hvt_A 321 SLVALHFTDLLKTESDKTSLKILFTPTANEVFNFIS-TTKD--RVFLATYDNVV--AKVVTFTLE-NEQ---WTKPVVLK 391 (711)
T ss_dssp CEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEE-ECSS--CEEEEEEETTE--EEEEEECEE-TTE---ECCCEEEC
T ss_pred eEEEEECCcccccccccccceEEECCCCCCeEEEEE-EECC--EEEEEEEECCE--EEEEEEECC-CCc---eEEEeccC
Confidence 7999998763 2233 44443 3344443 5543 57777766653 567777663 231 01233
Q ss_pred ecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEeeccCCCchhhhhccCCCCceEEEEEcCCCcEEEEE
Q 004067 461 LTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGA 540 (776)
Q Consensus 461 l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~ 540 (776)
++....+...+.+++++.+++..++..+|+++++++.. ++ .+++...+ ..++...+ ..+.+.+++.||.+++++
T Consensus 392 lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~-~~~l~~~~---~~~~~~~~-~~e~v~~~s~DG~~i~~~ 465 (711)
T 4hvt_A 392 LPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE-LKIIRKAL---YSFDSENY-VLEQKEATSFDGVKIPYF 465 (711)
T ss_dssp CCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC-EEEEECCS---SCCCGGGE-EEEEEEEECTTSCEEEEE
T ss_pred CCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc-EEEEecCC---cccCcccC-eeEEEEEECCCCeEEEEE
Confidence 33222345567889999999999999999999999986 54 35555432 24555555 688999999999999999
Q ss_pred EEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhh-HHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccH
Q 004067 541 LYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDA 619 (776)
Q Consensus 541 ~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~ 619 (776)
++.|++. ...++.|+||++|||++... ...| .... +.|+++||+|+++|+||+|++|..|........+...+
T Consensus 466 l~~P~~~-~~~~~~P~vl~~HGG~~~~~-~~~~----~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~ 539 (711)
T 4hvt_A 466 LVYKKGI-KFDGKNPTLLEAYGGFQVIN-APYF----SRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAF 539 (711)
T ss_dssp EEEETTC-CCSSCCCEEEECCCCTTCCC-CCCC----CHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHH
T ss_pred EEecCCC-CCCCCccEEEEECCCCCCCC-CCcc----cHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcH
Confidence 9999875 22368899999999977654 1222 2222 57889999999999999999999998877777777789
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc-----ccccccCCCCC--
Q 004067 620 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF-----YTEKYMGLPSE-- 692 (776)
Q Consensus 620 ~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~-- 692 (776)
+|+.+++++|+++..+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+... +...+ +.|..
T Consensus 540 ~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~-G~p~~~~ 618 (711)
T 4hvt_A 540 NDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEY-GDPEIPN 618 (711)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHH-CCTTSHH
T ss_pred HHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHHHHh-CCCcCHH
Confidence 99999999999999899999999999999999999999999999999999999998654321 11222 44432
Q ss_pred CccchhcCChhhhhccCCC--cEEEEecCCCCccChHHHHHHHHHH-HHCCCCeEEEEecCCCCCCCC-CCcHHHHHHHH
Q 004067 693 DPVGYEYSSVMHHVHKMKG--KLLLVHGMIDENVHFRHTARLINAL-VAARKPYEILIFPDERHMPRR-HRDRIYMEERI 768 (776)
Q Consensus 693 ~~~~~~~~~~~~~~~~i~~--P~lii~G~~D~~v~~~~~~~~~~~l-~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~ 768 (776)
....+...+|+.++.++++ |+|++||.+|.+||+.++.+++++| ++.+.+++++++++++|.+.. ..........+
T Consensus 619 ~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i 698 (711)
T 4hvt_A 619 DLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINL 698 (711)
T ss_dssp HHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHH
Confidence 1234567799999999886 9999999999999999999999999 999999999999999999743 33456777888
Q ss_pred HHHHHHhC
Q 004067 769 WEFIERTL 776 (776)
Q Consensus 769 ~~fl~~~l 776 (776)
.+||.++|
T Consensus 699 ~~FL~~~L 706 (711)
T 4hvt_A 699 YTFFANAL 706 (711)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999874
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.95 E-value=3.7e-26 Score=244.83 Aligned_cols=299 Identities=13% Similarity=0.056 Sum_probs=208.8
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
.+++|||||++|+|.+..++ ..+||++|+++++.++++.... ..+..+.|||
T Consensus 39 ~~~~~SpDg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~~~-----------------------~~~~~~~~sp--- 90 (388)
T 3pe7_A 39 YQKCFTRDGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEGRG-----------------------DNTFGGFLSP--- 90 (388)
T ss_dssp TSCCBCTTSCEEEEEECTTS--SCEEEEEETTTCEEEECCCSSC-----------------------BCSSSCEECT---
T ss_pred cCccCCCCCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeCCC-----------------------CCccceEEcC---
Confidence 56899999999999997544 3689999999999999986322 1233568999
Q ss_pred CceEEEEeC-CCcEEEEeCCCCccceecCCCCCCCccC--ceeCCCCCEEEEEE-----------------------CCc
Q 004067 138 KKKIIMVPL-PDGIYFQDLSCSKPELKLSSSSCSPVID--PHLSSDGTMIAFVR-----------------------DCE 191 (776)
Q Consensus 138 dg~~l~~~~-~~~l~~~d~~~~~~~~~l~~~~~~~~~~--~~~SpDg~~la~~~-----------------------~~~ 191 (776)
||++|+|.. +..||+||+++++.+ .+...+...... ..++|||+.++... ..+
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEEN-VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEE-EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcce-eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 999999985 558999999999887 554443322222 23499999998653 146
Q ss_pred EEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCc
Q 004067 192 LHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQ 270 (776)
Q Consensus 192 l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (776)
||++++++|+.++++..... +..+.||| ||++|+|.......
T Consensus 170 l~~~d~~~g~~~~l~~~~~~------------------~~~~~~sp~dg~~l~~~~~~~~~------------------- 212 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQENQW------------------LGHPIYRPYDDSTVAFCHEGPHD------------------- 212 (388)
T ss_dssp EEEEETTTCCEEEEEEESSC------------------EEEEEEETTEEEEEEEEECSCTT-------------------
T ss_pred EEEEECCCCceEEeecCCcc------------------ccccEECCCCCCEEEEEEecCCC-------------------
Confidence 99999999999888764431 34678999 99999998742110
Q ss_pred ceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCc-eEEEEEEECCCC
Q 004067 271 EDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQT-KLKVLKFDIKTG 349 (776)
Q Consensus 271 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~-~~~l~~~d~~~g 349 (776)
.....|+++|+++++.+.+... .....+..+.|||||+.|++.+.+... ...|++||+++|
T Consensus 213 -----------~~~~~l~~~d~~~~~~~~l~~~-------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 213 -----------LVDARMWLINEDGTNMRKVKTH-------AEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp -----------TSSCSEEEEETTSCCCEESCCC-------CTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred -----------CCcceEEEEeCCCCceEEeeeC-------CCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 0114589999998887776321 111357789999999988877765433 357999999999
Q ss_pred ceEEEEEeccCceeecccccccCCCCccccCCeEEEEecc------CCceEEEEEeCCCceeeccccCCe----------
Q 004067 350 QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK------TGFRHLYLHDINGTCLGPITEGDW---------- 413 (776)
Q Consensus 350 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~------~g~~~l~~~~~~g~~~~~lt~~~~---------- 413 (776)
+.+.++......... ..+.+..++.++..+++.... .+...||+|++++++.++|+.+..
T Consensus 275 ~~~~l~~~~~~~~~~----~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 350 (388)
T 3pe7_A 275 ENRQLTSMPACSHLM----SNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQ 350 (388)
T ss_dssp CEEEEEEECCEEEEE----ECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSS
T ss_pred ceEEEEcCCCceeee----ecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccc
Confidence 988887643310000 001111113344556665533 566799999999999988887653
Q ss_pred -EEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 414 -MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 414 -~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
.+.. +.|||||++|+|.+...+. .+||.+++
T Consensus 351 ~~~~~-~~~spDg~~l~~~s~~~g~--~~l~~~~l 382 (388)
T 3pe7_A 351 VTHPH-PSFTPDDKQILFTSDVHGK--PALYLATL 382 (388)
T ss_dssp TTCCC-CEECTTSSEEEEEECTTSS--CEEEEEEC
T ss_pred cCCCC-ccCCCCCCEEEEEecCCCc--eeEEEEEC
Confidence 2333 3599999999999877654 68999998
No 15
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.93 E-value=2.3e-24 Score=250.57 Aligned_cols=296 Identities=11% Similarity=0.019 Sum_probs=203.7
Q ss_pred CceeEcCCCCEEEEEeCCCC----cCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEe
Q 004067 58 TSIGFSPDDNLITYLLSPDH----SLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWV 133 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~----~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s 133 (776)
.+++|||||++|+|.+.... ....++|+||+++++.++|+.+. ..+..+.||
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~------------------------~~~~~~~~S 120 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIP------------------------NNTQWVTWS 120 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC------------------------TTEEEEEEC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCC------------------------CcceeeEEC
Confidence 44899999999999886321 11258999999999988877532 257889999
Q ss_pred ecCCCceEEEEeCCCcEEEEeCCCCccceecCCCCCC------------------CccCceeCCCCCEEEEEECC-----
Q 004067 134 KTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCS------------------PVIDPHLSSDGTMIAFVRDC----- 190 (776)
Q Consensus 134 p~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~------------------~~~~~~~SpDg~~la~~~~~----- 190 (776)
| ||++|+|..+++||++|+.+++.+ ++|..... ....+.|||||++|||.+.+
T Consensus 121 P---dG~~la~~~~~~i~~~~~~~~~~~-~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~ 196 (740)
T 4a5s_A 121 P---VGHKLAYVWNNDIYVKIEPNLPSY-RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVP 196 (740)
T ss_dssp S---STTCEEEEETTEEEEESSTTSCCE-ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCC
T ss_pred C---CCCEEEEEECCeEEEEECCCCceE-EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCc
Confidence 9 999999999999999999999988 77653321 11348899999999998621
Q ss_pred --------------------------------cEEEEecCC---C---ceeEEeeCCCCCceecCCcccceecccCCcce
Q 004067 191 --------------------------------ELHVLNLLI---N---EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTG 232 (776)
Q Consensus 191 --------------------------------~l~~~~l~~---g---~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (776)
.|+++++++ | +.+++..... ..+... .+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~----~~~~~~--------~~~~ 264 (740)
T 4a5s_A 197 LIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS----MLIGDH--------YLCD 264 (740)
T ss_dssp EEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH----HHTSCE--------EEEE
T ss_pred eEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc----CCCCCe--------EEEE
Confidence 378888888 7 5555542110 000001 1346
Q ss_pred EEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCc-------eEEEEcccC
Q 004067 233 YWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP-------VSWMDLQCG 305 (776)
Q Consensus 233 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~-------~~~l~~~~~ 305 (776)
++|||||+.+++...... ....|+++|+++|+ ..++...
T Consensus 265 ~~wspdg~~~~~~~~r~~--------------------------------~~~~i~~~d~~tg~~~~~~~~~~~l~~~-- 310 (740)
T 4a5s_A 265 VTWATQERISLQWLRRIQ--------------------------------NYSVMDICDYDESSGRWNCLVARQHIEM-- 310 (740)
T ss_dssp EEEEETTEEEEEEEESST--------------------------------TEEEEEEEEEETTTTEEEECGGGCEEEE--
T ss_pred EEEeCCCeEEEEEeCCCC--------------------------------CEEEEEEEECCCCccccceeEEEEeeec--
Confidence 889999998777654321 12568999999987 2222111
Q ss_pred CCCCCCCcce-----EEEEEeccCCeEEE-EEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCcccc
Q 004067 306 GTDQNYDEEY-----LARVNWMHGNILTA-QVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKY 379 (776)
Q Consensus 306 ~~~~~~~~~~-----~~~~~~SpDg~~l~-~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (776)
.+... ...+.|||||+.++ +.+.++ +..+||++|+++++.++|+... |.... .+ .++
T Consensus 311 -----~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~-G~~~l~~~~~~~~~~~~lT~g~---~~v~~-~~-------~~d 373 (740)
T 4a5s_A 311 -----STTGWVGRFRPSEPHFTLDGNSFYKIISNEE-GYRHICYFQIDKKDCTFITKGT---WEVIG-IE-------ALT 373 (740)
T ss_dssp -----CSSSCSSSSSCCCCEECTTSSEEEEEEECTT-SCEEEEEEETTCSSCEESCCSS---SCEEE-EE-------EEC
T ss_pred -----cCCceEccCcCCCceEcCCCCEEEEEEEcCC-CceEEEEEECCCCceEecccCC---EEEEE-EE-------EEe
Confidence 11112 23689999999877 555444 6789999999999999988653 22110 01 345
Q ss_pred CCeEEEEecc----CCceEEEEEeCCCceee-ccccC----CeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 380 SGGFIWASEK----TGFRHLYLHDINGTCLG-PITEG----DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 380 ~~~~~~~s~~----~g~~~l~~~~~~g~~~~-~lt~~----~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
++.++|.+.. .+..+||.+++++++.+ +||.. ......+ .||+||+++++.....++ ..++.+++
T Consensus 374 ~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~-~~S~dg~~~~~~~s~~~~--p~~~l~~~ 447 (740)
T 4a5s_A 374 SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSV-SFSKEAKYYQLRCSGPGL--PLYTLHSS 447 (740)
T ss_dssp SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEE-EECTTSSEEEEEECSBSS--CEEEEEET
T ss_pred CCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEE-EECCCCCEEEEEeCCCCC--CEEEEEEC
Confidence 6678998876 56789999999988765 77742 1223333 499999998888766545 35666665
No 16
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.93 E-value=7.2e-24 Score=226.97 Aligned_cols=344 Identities=10% Similarity=0.072 Sum_probs=222.2
Q ss_pred ceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEeCC--C--cEEEEeCC
Q 004067 81 RKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVPLP--D--GIYFQDLS 156 (776)
Q Consensus 81 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~~~--~--~l~~~d~~ 156 (776)
.++|+-...+++.++++.+... ....-+..+.||| ||++|+|..+ + +||++|++
T Consensus 11 ~~~~~~~~~g~~~~~lt~~~~~-------------------~~~~~~~~~~~Sp---Dg~~l~~~~~~~g~~~l~~~d~~ 68 (388)
T 3pe7_A 11 FDTYQDASTGAQVTRLTPPDVT-------------------CHRNYFYQKCFTR---DGSKLLFGGAFDGPWNYYLLDLN 68 (388)
T ss_dssp CEEEECTTTCCEEEECSCTTSC-------------------EECCCTTSCCBCT---TSCEEEEEECTTSSCEEEEEETT
T ss_pred ceEEecCCCCcceEEecCCccc-------------------ccchhhcCccCCC---CCCEEEEEEcCCCCceEEEEeCC
Confidence 4688755556677888864320 0000112378999 9999999844 3 49999999
Q ss_pred CCccceecCCCCCCCccCceeCCCCCEEEEEECC-cEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEE
Q 004067 157 CSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC-ELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWW 235 (776)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~-~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 235 (776)
+++.+ +++.........+.|||||+.|+|...+ .||++++++|+.+++...+.. +.. .....+
T Consensus 69 ~g~~~-~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~---------~~~------~~~~~~ 132 (388)
T 3pe7_A 69 TQVAT-QLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE---------WVG------YGTWVA 132 (388)
T ss_dssp TCEEE-ECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT---------EEE------EEEEEE
T ss_pred CCceE-EeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh---------ccc------ccceeE
Confidence 99998 8877665434478999999999999964 799999999998888765432 000 012335
Q ss_pred CCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcce
Q 004067 236 SLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEY 315 (776)
Q Consensus 236 spDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 315 (776)
+|||+.|+....+...... ......|...........|+++|+++++.+.+.. ....
T Consensus 133 ~~dg~~l~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---------~~~~ 189 (388)
T 3pe7_A 133 NSDCTKLVGIEIRREDWVP--------------LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ---------ENQW 189 (388)
T ss_dssp CTTSSEEEEEEEEGGGCCC--------------CCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE---------ESSC
T ss_pred CCCCCeeccccccCccccc--------------ccccchhhhhhccCCcceEEEEECCCCceEEeec---------CCcc
Confidence 9999998875532211000 0000000000001123679999999999888743 3345
Q ss_pred EEEEEecc-CCeEEEEEEeecC--ceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCc
Q 004067 316 LARVNWMH-GNILTAQVLNRSQ--TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 392 (776)
Q Consensus 316 ~~~~~~Sp-Dg~~l~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~ 392 (776)
+..+.||| ||+.|++...... ....|+++|++++..+.++......+. ....|+| ++..++|.+...+.
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~-~~~~~sp-------dg~~l~~~~~~~~~ 261 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESC-THEFWVP-------DGSALVYVSYLKGS 261 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEE-EEEEECT-------TSSCEEEEEEETTC
T ss_pred ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCccc-ccceECC-------CCCEEEEEecCCCC
Confidence 78899999 9998888876432 245799999999888887764422121 1223433 34558888877665
Q ss_pred e--EEEEEeCCCceeeccccCCeEEEE-E----EeecCCCcEEEEEEccC----CCceeeEEEEEeCCCCCCccccceee
Q 004067 393 R--HLYLHDINGTCLGPITEGDWMVEQ-I----VGVNEASGQVYFTGTLD----GPLESHLYCAKLYPDWNHTLEAPVKL 461 (776)
Q Consensus 393 ~--~l~~~~~~g~~~~~lt~~~~~~~~-~----~~~s~dg~~i~~~~~~~----~~~~~~l~~~~~~~~g~~~~~~~~~l 461 (776)
. .||+||+++++.++++........ . ..|||||+.|++..... ......||.+++ .+. ..++|
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~--~~~----~~~~l 335 (388)
T 3pe7_A 262 PDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM--KNG----TQHRV 335 (388)
T ss_dssp CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET--TTT----EEEEE
T ss_pred CcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec--cCC----ceEEe
Confidence 4 499999999988777654321110 0 14899999999876431 012357999998 343 56677
Q ss_pred cCCCC------------eEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCC
Q 004067 462 TNGKG------------KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 500 (776)
Q Consensus 462 ~~~~~------------~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~ 500 (776)
+.... +..++|||||++|++..... ..++||++++.++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 336 ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPES 385 (388)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGG
T ss_pred ccccCcccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChh
Confidence 76554 45679999999999987654 4578999998654
No 17
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.92 E-value=6.7e-24 Score=210.72 Aligned_cols=223 Identities=15% Similarity=0.138 Sum_probs=172.4
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
..+.+.+++ +|..+.++++.|++.. ++.|+||++||..+... .+..+++.|+++||.|+++|+||+|++
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~~p~~~~---~~~p~vv~~HG~~g~~~-------~~~~~~~~l~~~G~~v~~~d~~g~g~~ 73 (241)
T 3f67_A 5 IAGETSIPS-QGENMPAYHARPKNAD---GPLPIVIVVQEIFGVHE-------HIRDLCRRLAQEGYLAIAPELYFRQGD 73 (241)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEETTCC---SCEEEEEEECCTTCSCH-------HHHHHHHHHHHTTCEEEEECTTTTTCC
T ss_pred eeeeEEEec-CCcceEEEEecCCCCC---CCCCEEEEEcCcCccCH-------HHHHHHHHHHHCCcEEEEecccccCCC
Confidence 456788888 8889999999998642 46899999999665432 345567889999999999999999776
Q ss_pred chhhhhhhh-------hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCc
Q 004067 603 GLKFEASIK-------HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 675 (776)
Q Consensus 603 ~~~~~~~~~-------~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~ 675 (776)
...+..... ........+|+.++++++.++. +|.++|+++||||||.+++.++.++|+ +.++++..+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~- 150 (241)
T 3f67_A 74 PNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLV- 150 (241)
T ss_dssp GGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCS-
T ss_pred CCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEecccc-
Confidence 544321110 0001123778999999998876 788999999999999999999999988 566666544321
Q ss_pred ccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCC
Q 004067 676 DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 755 (776)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 755 (776)
.....+...++...+.++++|+|+++|++|..+++..+..+++.+.+.+.+++++++++++|.+
T Consensus 151 ----------------~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 214 (241)
T 3f67_A 151 ----------------GEKSLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAF 214 (241)
T ss_dssp ----------------CCCCSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTT
T ss_pred ----------------CCCccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcce
Confidence 0112233456777888999999999999999999999999999999999999999999999988
Q ss_pred CC-------CCcHHHHHHHHHHHHHHh
Q 004067 756 RR-------HRDRIYMEERIWEFIERT 775 (776)
Q Consensus 756 ~~-------~~~~~~~~~~~~~fl~~~ 775 (776)
.. .....+.++.+.+||++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 215 NADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 42 233577889999999864
No 18
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=1.7e-23 Score=225.48 Aligned_cols=324 Identities=15% Similarity=0.104 Sum_probs=219.2
Q ss_pred CCceeEcCCCCEEEEEeC----CCCcCcceEEEEec--CCCceE---EeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCe
Q 004067 57 PTSIGFSPDDNLITYLLS----PDHSLSRKVFSFDP--KTCKQE---LVFSPPDGGLDENNISPEEKLRRERLRERGLGV 127 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~----~~~~~~~~l~~~~~--~~~~~~---~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 127 (776)
+....|+++|..+.-... .+|.....|++||+ .+++.. .+..+.. .+..-........-....+.
T Consensus 65 ~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 65 VQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQ------WLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp CCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGG------GHHHHHHHHHHHHHHHHHSS
T ss_pred cCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChh------HHHHHHHHHHHHHHHHHcCC
Confidence 466789999986653322 23322347999999 877642 2332111 00000000000000000111
Q ss_pred eeEEEeecCCCceEEEEeCC-------CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC----cEEEEe
Q 004067 128 TRYEWVKTSSKKKIIMVPLP-------DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC----ELHVLN 196 (776)
Q Consensus 128 ~~~~~sp~~~dg~~l~~~~~-------~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~----~l~~~~ 196 (776)
. .+ .+.+|+|... +.|++||++++..+ .++.... .+..++|||||++|+|.+.. .|++++
T Consensus 139 ~----~~---~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~-~l~~~~~-~v~~~~~Spdg~~la~~s~~~~~~~i~~~d 209 (415)
T 2hqs_A 139 K----GA---FRTRIAYVVQTNGGQFPYELRVSDYDGYNQF-VVHRSPQ-PLMSPAWSPDGSKLAYVTFESGRSALVIQT 209 (415)
T ss_dssp C----CC---TTCEEEEEEECSSSSCCEEEEEEETTSCSCE-EEEEESS-CEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred C----Cc---CCCEEEEEEecCCCCccceEEEEcCCCCCCE-EEeCCCC-cceeeEEcCCCCEEEEEEecCCCcEEEEEE
Confidence 1 13 5777877632 68999999988777 7765543 48889999999999999864 799999
Q ss_pred cCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCC
Q 004067 197 LLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYP 276 (776)
Q Consensus 197 l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (776)
+++|+.++++..... +..++|||||+.|+|.....+
T Consensus 210 ~~tg~~~~l~~~~~~------------------~~~~~~spdg~~la~~~~~~g-------------------------- 245 (415)
T 2hqs_A 210 LANGAVRQVASFPRH------------------NGAPAFSPDGSKLAFALSKTG-------------------------- 245 (415)
T ss_dssp TTTCCEEEEECCSSC------------------EEEEEECTTSSEEEEEECTTS--------------------------
T ss_pred CCCCcEEEeecCCCc------------------ccCEEEcCCCCEEEEEEecCC--------------------------
Confidence 999998877643321 447889999999998764221
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE
Q 004067 277 FAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 356 (776)
Q Consensus 277 ~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 356 (776)
...|++||+++++...+ ..+...+..++|||||+.|++.+.++ ....||+||+++++.+.++.
T Consensus 246 -------~~~i~~~d~~~~~~~~l---------~~~~~~~~~~~~spdg~~l~~~s~~~-g~~~i~~~d~~~~~~~~l~~ 308 (415)
T 2hqs_A 246 -------SLNLYVMDLASGQIRQV---------TDGRSNNTEPTWFPDSQNLAFTSDQA-GRPQVYKVNINGGAPQRITW 308 (415)
T ss_dssp -------SCEEEEEETTTCCEEEC---------CCCSSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTSSCCEECCC
T ss_pred -------CceEEEEECCCCCEEeC---------cCCCCcccceEECCCCCEEEEEECCC-CCcEEEEEECCCCCEEEEec
Confidence 15689999999988766 44556788999999999888887544 34579999999998777654
Q ss_pred eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCC
Q 004067 357 EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG 436 (776)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~ 436 (776)
+.. +. ....|+| ++..+++.+..+|...|++|++++++.+.++.+. .+..+ .|+|||+.|++.+...+
T Consensus 309 ~~~--~~-~~~~~sp-------dG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~-~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 309 EGS--QN-QDADVSS-------DGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETP-SLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp SSS--EE-EEEEECT-------TSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEE-EECTTSSEEEEEEEETT
T ss_pred CCC--cc-cCeEECC-------CCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCe-EEcCCCCEEEEEEcCCC
Confidence 322 11 1122333 3444677776667789999999999888888764 44444 59999999999887654
Q ss_pred CceeeEEEEEeCCCCCCccccceeecCCCC-eEEEEEcCCc
Q 004067 437 PLESHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNM 476 (776)
Q Consensus 437 ~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~-~~~~~~spdg 476 (776)
...||.+++ +|. ..++|+.+.+ +..++|||..
T Consensus 377 --~~~l~~~d~--~g~----~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 377 --GSVLNLVST--DGR----FKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp --EEEEEEEET--TSC----CEEECCCSSSEEEEEEECCCC
T ss_pred --ccEEEEEEC--CCC----cEEEeeCCCCCCcCCcccccc
Confidence 368999998 454 6778887754 6788999964
No 19
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=1.2e-22 Score=218.68 Aligned_cols=260 Identities=18% Similarity=0.187 Sum_probs=198.6
Q ss_pred CCCCEEEEEeCCCCc-CcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEE
Q 004067 64 PDDNLITYLLSPDHS-LSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKII 142 (776)
Q Consensus 64 pDG~~ia~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l 142 (776)
+++++|+|.+...+. ....|++||+++++.+.++.+. ..+..+.||| ||++|
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~------------------------~~v~~~~~Sp---dg~~l 193 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSP------------------------QPLMSPAWSP---DGSKL 193 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEES------------------------SCEEEEEECT---TSSEE
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCC------------------------CcceeeEEcC---CCCEE
Confidence 458899999875321 1268999999998888888643 3688999999 99999
Q ss_pred EEeCC----CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC----CcEEEEecCCCceeEEeeCCCCCce
Q 004067 143 MVPLP----DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD----CELHVLNLLINEQRQLTHGANGNTV 214 (776)
Q Consensus 143 ~~~~~----~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~----~~l~~~~l~~g~~~~lt~~~~~~~~ 214 (776)
++... ..|++||+.+++.+ .++.... .+..++|||||++|+|+.. .+||++++.+++.++++.....
T Consensus 194 a~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~--- 268 (415)
T 2hqs_A 194 AYVTFESGRSALVIQTLANGAVR-QVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN--- 268 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCEE-EEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSC---
T ss_pred EEEEecCCCcEEEEEECCCCcEE-EeecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCc---
Confidence 99843 38999999999887 6765544 4788999999999999874 3599999999988777654321
Q ss_pred ecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC
Q 004067 215 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG 294 (776)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 294 (776)
+..++|||||+.|+|.+.+.+ ..+|++||+++
T Consensus 269 ---------------~~~~~~spdg~~l~~~s~~~g---------------------------------~~~i~~~d~~~ 300 (415)
T 2hqs_A 269 ---------------NTEPTWFPDSQNLAFTSDQAG---------------------------------RPQVYKVNING 300 (415)
T ss_dssp ---------------EEEEEECTTSSEEEEEECTTS---------------------------------SCEEEEEETTS
T ss_pred ---------------ccceEECCCCCEEEEEECCCC---------------------------------CcEEEEEECCC
Confidence 346889999999999874321 14689999999
Q ss_pred CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCC
Q 004067 295 GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDK 374 (776)
Q Consensus 295 ~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~ 374 (776)
++...+ ......+..++|||||+.|++..... ....|++||+++++.+.++.+. .. ....|+|
T Consensus 301 ~~~~~l---------~~~~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~~~~~l~~~~-~~---~~~~~sp--- 363 (415)
T 2hqs_A 301 GAPQRI---------TWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGGVQVLSSTF-LD---ETPSLAP--- 363 (415)
T ss_dssp SCCEEC---------CCSSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTCCEEECCCSS-SC---EEEEECT---
T ss_pred CCEEEE---------ecCCCcccCeEECCCCCEEEEEECcC-CceEEEEEECCCCCEEEecCCC-Cc---CCeEEcC---
Confidence 987666 33455788899999999888876543 3578999999999987765442 11 1122333
Q ss_pred CccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCC
Q 004067 375 GVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEAS 425 (776)
Q Consensus 375 ~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg 425 (776)
++..+++.+...+...||+|+++++..++|+.+...+..+. |+|.-
T Consensus 364 ----dg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~-~~~~~ 409 (415)
T 2hqs_A 364 ----NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPA-WSPYL 409 (415)
T ss_dssp ----TSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEE-ECCCC
T ss_pred ----CCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCc-ccccc
Confidence 34447777777777899999999999999999888888775 88853
No 20
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.91 E-value=2.3e-23 Score=208.22 Aligned_cols=230 Identities=19% Similarity=0.217 Sum_probs=163.9
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchh
Q 004067 526 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 605 (776)
Q Consensus 526 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~ 605 (776)
.+++.. +|.+++++++.|+... ++.|+||++||.+++.. ...|..+++.|+++||.|+++|+||+|.|...
T Consensus 3 ~~~~~~-~g~~l~~~~~~p~~~~---~~~p~vvl~HG~~~~~~-----~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 73 (251)
T 2wtm_A 3 AMYIDC-DGIKLNAYLDMPKNNP---EKCPLCIIIHGFTGHSE-----ERHIVAVQETLNEIGVATLRADMYGHGKSDGK 73 (251)
T ss_dssp EEEEEE-TTEEEEEEEECCTTCC---SSEEEEEEECCTTCCTT-----SHHHHHHHHHHHHTTCEEEEECCTTSTTSSSC
T ss_pred ceEEec-CCcEEEEEEEccCCCC---CCCCEEEEEcCCCcccc-----cccHHHHHHHHHHCCCEEEEecCCCCCCCCCc
Confidence 345654 8889999999987521 36789999999776521 11345567889999999999999999988643
Q ss_pred hhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc-cc-ccc
Q 004067 606 FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-DT-FYT 683 (776)
Q Consensus 606 ~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-~~-~~~ 683 (776)
....... ...+|+.++++++.+...+ ++++++||||||.+++.++.++|++++++|+.+|....... .. ...
T Consensus 74 ~~~~~~~----~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 147 (251)
T 2wtm_A 74 FEDHTLF----KWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELL 147 (251)
T ss_dssp GGGCCHH----HHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEET
T ss_pred cccCCHH----HHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhc
Confidence 2211111 1256788888888665433 49999999999999999999999999999999987542110 00 000
Q ss_pred c-cc--cCCCC-----CC----c---cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEe
Q 004067 684 E-KY--MGLPS-----ED----P---VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 748 (776)
Q Consensus 684 ~-~~--~~~~~-----~~----~---~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 748 (776)
. .+ ...+. .. . ......+....+.++++|+|+++|++|..+|+..+..+.+.+ .+.+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~----~~~~~~~~ 223 (251)
T 2wtm_A 148 GLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY----KNCKLVTI 223 (251)
T ss_dssp TEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHS----SSEEEEEE
T ss_pred cccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhC----CCcEEEEE
Confidence 0 00 00000 00 0 001122344567788999999999999999999888887765 47899999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 749 PDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 749 ~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
++++|.+ .+.++++.+.+.+||++++
T Consensus 224 ~~~gH~~--~~~~~~~~~~i~~fl~~~~ 249 (251)
T 2wtm_A 224 PGDTHCY--DHHLELVTEAVKEFMLEQI 249 (251)
T ss_dssp TTCCTTC--TTTHHHHHHHHHHHHHHHH
T ss_pred CCCCccc--chhHHHHHHHHHHHHHHhc
Confidence 9999988 6788999999999998764
No 21
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.91 E-value=3.3e-23 Score=207.50 Aligned_cols=206 Identities=16% Similarity=0.194 Sum_probs=141.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.||.+|++++|.|++. .+.|+||++||+++... ...+...++.|+++||+|+++|+||+|.++........
T Consensus 38 ~dG~~i~g~l~~P~~~----~~~p~Vl~~HG~g~~~~-----~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~ 108 (259)
T 4ao6_A 38 VDGRTVPGVYWSPAEG----SSDRLVLLGHGGTTHKK-----VEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREP 108 (259)
T ss_dssp ETTEEEEEEEEEESSS----CCSEEEEEEC-------------CHHHHHHHHHHHTTEEEEEECCCC-------------
T ss_pred eCCeEEEEEEEeCCCC----CCCCEEEEeCCCccccc-----chHHHHHHHHHHHCCCeEEeeccCCCCCCCCccccccc
Confidence 5999999999999774 46799999999876532 12344568899999999999999999977543221110
Q ss_pred hcc---------------CCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc
Q 004067 612 HNC---------------GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 676 (776)
Q Consensus 612 ~~~---------------~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~ 676 (776)
... ....+.|..++++++... +|.++|+++|+||||++++.+++..|++ +++++..+....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pri-~Aav~~~~~~~~- 184 (259)
T 4ao6_A 109 TDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKRI-KVALLGLMGVEG- 184 (259)
T ss_dssp CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTTE-EEEEEESCCTTS-
T ss_pred chhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCce-EEEEEecccccc-
Confidence 000 001245677777777654 4778999999999999999999998864 555554332110
Q ss_pred cccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCC
Q 004067 677 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 756 (776)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 756 (776)
....++...+.++++|+|++||++|.++|++++.++++++. .....++++|+ +|..
T Consensus 185 --------------------~~~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~--~~~k~l~~~~G-~H~~- 240 (259)
T 4ao6_A 185 --------------------VNGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLG--TKQKTLHVNPG-KHSA- 240 (259)
T ss_dssp --------------------TTHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCC--CSSEEEEEESS-CTTC-
T ss_pred --------------------ccccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEeCC-CCCC-
Confidence 11223456788999999999999999999999999999883 34567889987 5533
Q ss_pred CCCcHHHHHHHHHHHHHHhC
Q 004067 757 RHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 757 ~~~~~~~~~~~~~~fl~~~l 776 (776)
....+..+.+.+||++||
T Consensus 241 --~p~~e~~~~~~~fl~~hL 258 (259)
T 4ao6_A 241 --VPTWEMFAGTVDYLDQRL 258 (259)
T ss_dssp --CCHHHHTHHHHHHHHHHC
T ss_pred --cCHHHHHHHHHHHHHHhc
Confidence 235677899999999997
No 22
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.90 E-value=2.3e-22 Score=200.73 Aligned_cols=211 Identities=16% Similarity=0.191 Sum_probs=164.7
Q ss_pred Cce--EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCC
Q 004067 523 PPD--IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 600 (776)
Q Consensus 523 ~~~--~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g 600 (776)
..| .+.+++.+| .+.++++.|.+ ++.|+||++||.++....... ..+..++..|+++||.|+++|+||+|
T Consensus 20 ~~e~~~~~~~~~~g-~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~G 91 (249)
T 2i3d_A 20 QGHMPEVIFNGPAG-RLEGRYQPSKE-----KSAPIAIILHPHPQFGGTMNN--QIVYQLFYLFQKRGFTTLRFNFRSIG 91 (249)
T ss_dssp ----CEEEEEETTE-EEEEEEECCSS-----TTCCEEEEECCCGGGTCCTTS--HHHHHHHHHHHHTTCEEEEECCTTST
T ss_pred cCceeEEEEECCCc-eEEEEEEcCCC-----CCCCEEEEECCCcccCCCccc--hHHHHHHHHHHHCCCEEEEECCCCCC
Confidence 455 899999888 89999998865 456999999996543221111 12345678899999999999999999
Q ss_pred CCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccc
Q 004067 601 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT 680 (776)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~ 680 (776)
.+...+.. .....+|+.++++++.++.. +.++++++||||||.+++.++.++|+ ++++++.+|..+...
T Consensus 92 ~s~~~~~~------~~~~~~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--- 160 (249)
T 2i3d_A 92 RSQGEFDH------GAGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD--- 160 (249)
T ss_dssp TCCSCCCS------SHHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC---
T ss_pred CCCCCCCC------ccchHHHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh---
Confidence 87643321 11235889999999988753 66799999999999999999999998 899999988754210
Q ss_pred cccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHH-CCCCeEEEEecCCCCCCCCCC
Q 004067 681 FYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA-ARKPYEILIFPDERHMPRRHR 759 (776)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~ 759 (776)
...+.+++.|+|+++|+.|..+++..+.++++.+.+ .+.+++++++++++|.+. .
T Consensus 161 ----------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~--~ 216 (249)
T 2i3d_A 161 ----------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN--G 216 (249)
T ss_dssp ----------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT--T
T ss_pred ----------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc--c
Confidence 123456789999999999999999999999999865 345899999999999874 5
Q ss_pred cHHHHHHHHHHHHHHhC
Q 004067 760 DRIYMEERIWEFIERTL 776 (776)
Q Consensus 760 ~~~~~~~~~~~fl~~~l 776 (776)
...++.+.+.+||++++
T Consensus 217 ~~~~~~~~i~~fl~~~l 233 (249)
T 2i3d_A 217 KVDELMGECEDYLDRRL 233 (249)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 78899999999998763
No 23
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.90 E-value=9e-23 Score=218.99 Aligned_cols=293 Identities=12% Similarity=0.083 Sum_probs=201.1
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+.+++|||||++|+|....++ ..+||++++++++.++++.... .....+.|||
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g--~~~l~~~d~~~~~~~~l~~~~~-----------------------~~~~~~~~sp-- 90 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDG--NRNYYLLNLETQQAVQLTEGKG-----------------------DNTFGGFIST-- 90 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTS--SCEEEEEETTTTEEEECCCSSC-----------------------BCTTTCEECT--
T ss_pred eecCcCCCCCCEEEEEEecCC--CceEEEEECCCCcEEEeecCCC-----------------------CccccceECC--
Confidence 378899999999999987643 3689999999999888875321 1122368999
Q ss_pred CCceEEEEeC-CCcEEEEeCCCCccceecCCCCCCCccC-------------------ceeCCCCCEEEEEE------CC
Q 004067 137 SKKKIIMVPL-PDGIYFQDLSCSKPELKLSSSSCSPVID-------------------PHLSSDGTMIAFVR------DC 190 (776)
Q Consensus 137 ~dg~~l~~~~-~~~l~~~d~~~~~~~~~l~~~~~~~~~~-------------------~~~SpDg~~la~~~------~~ 190 (776)
||++|+|.. +.+||++|+.+++.+ .++..+...... +.|||||+.+++.. ..
T Consensus 91 -dg~~l~~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~ 168 (396)
T 3c5m_A 91 -DERAFFYVKNELNLMKVDLETLEEQ-VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTC 168 (396)
T ss_dssp -TSSEEEEEETTTEEEEEETTTCCEE-EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCE
T ss_pred -CCCEEEEEEcCCcEEEEECCCCCcE-EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcc
Confidence 999999874 457999999999887 555433211111 46778887777653 23
Q ss_pred cEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCCCCCCC
Q 004067 191 ELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEA 269 (776)
Q Consensus 191 ~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (776)
.||++++++|+.++++..... +..+.||| ||++|+|.+.+...
T Consensus 169 ~l~~~d~~~g~~~~~~~~~~~------------------~~~~~~sp~dg~~l~~~~~~~~~------------------ 212 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQDTAW------------------LGHPIYRPFDDSTVGFCHEGPHD------------------ 212 (396)
T ss_dssp EEEEEETTTCCEEEEEEESSC------------------EEEEEEETTEEEEEEEEECSCSS------------------
T ss_pred eEEEEECCCCcEEeeccCCcc------------------cccceECCCCCCEEEEEecCCCC------------------
Confidence 699999999998888743321 34678999 89999998732110
Q ss_pred cceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeec-CceEEEEEEECCC
Q 004067 270 QEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS-QTKLKVLKFDIKT 348 (776)
Q Consensus 270 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~l~~~d~~~ 348 (776)
.....|+++|+++++.+.+.. ......+..+.|||||+.|++..... .....|++||+++
T Consensus 213 ------------~~~~~l~~~d~~~~~~~~l~~-------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 213 ------------LVDARMWLVNEDGSNVRKIKE-------HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp ------------SCSCCCEEEETTSCCCEESSC-------CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred ------------CCCceEEEEECCCCceeEeec-------cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 011357999998887666521 01134577899999999887776553 2335699999999
Q ss_pred CceEEEEEeccCceeecccccccCCCCccccCCeEEEEec--------------cCCceEEEEEeCCCceeeccccCCeE
Q 004067 349 GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASE--------------KTGFRHLYLHDINGTCLGPITEGDWM 414 (776)
Q Consensus 349 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--------------~~g~~~l~~~~~~g~~~~~lt~~~~~ 414 (776)
++.+.+..... +. ..|+|. ++. +++.+. ..+...||+|++++++.++|+.....
T Consensus 274 g~~~~l~~~~~--~~---~~~s~~------dg~-~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 341 (396)
T 3c5m_A 274 LENEEVMVMPP--CS---HLMSNF------DGS-LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTS 341 (396)
T ss_dssp CCEEEEEECCS--EE---EEEECS------SSS-EEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCC
T ss_pred CCeEEeeeCCC--CC---CCccCC------CCc-eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCc
Confidence 98887765321 21 223220 233 443321 13457999999999888888765431
Q ss_pred -----------EEEEEeecCCCcEEEEEEccCCCceeeEEEEEeC
Q 004067 415 -----------VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY 448 (776)
Q Consensus 415 -----------~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~ 448 (776)
... +.|++||+.|+|.+...+. .+||.++++
T Consensus 342 ~~~~~~~~~~~~~~-~~~s~dg~~l~~~s~~~~~--~~l~~~~~~ 383 (396)
T 3c5m_A 342 WDVLDGDRQITHPH-PSFTPNDDGVLFTSDFEGV--PAIYIADVP 383 (396)
T ss_dssp CCCBTTBSSTTCCC-CEECTTSSEEEEEECTTSS--CEEEEEECC
T ss_pred cccccccccCCCCC-ceEccCCCeEEEEecCCCC--ceEEEEEEc
Confidence 222 3599999999999876554 689999984
No 24
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.90 E-value=5.2e-23 Score=209.17 Aligned_cols=206 Identities=17% Similarity=0.200 Sum_probs=147.7
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
..+.||++||.+++.. .|..+++.|+++||.|+++|+||||.|..+........ ..+|+.++++++.+.
T Consensus 50 ~~~~VlllHG~~~s~~-------~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~----~~~d~~~~~~~l~~~ 118 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQ-------SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASD----WTADIVAAMRWLEER 118 (281)
T ss_dssp SSEEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHH----HHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCCHH-------HHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHH----HHHHHHHHHHHHHhC
Confidence 3467899999766543 35567899999999999999999998865433222222 267888888888764
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-------ccccccccCCCC------CCccchhc
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-------TFYTEKYMGLPS------EDPVGYEY 699 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-------~~~~~~~~~~~~------~~~~~~~~ 699 (776)
. ++++|+||||||.+++.++.++|++++++|+.+|...+.... ............ .....+..
T Consensus 119 ~----~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (281)
T 4fbl_A 119 C----DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPV 194 (281)
T ss_dssp C----SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSE
T ss_pred C----CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhcc
Confidence 3 589999999999999999999999999999998875432110 000000000000 00000000
Q ss_pred -------------CChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHH
Q 004067 700 -------------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEE 766 (776)
Q Consensus 700 -------------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 766 (776)
......++++++|+|+++|++|.++|++.+..+++.+. +.+++++++++++|.+.....++.+.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~--~~~~~l~~~~~~gH~~~~e~~~e~v~~ 272 (281)
T 4fbl_A 195 TPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIG--STEKELLWLENSYHVATLDNDKELILE 272 (281)
T ss_dssp EEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCC--CSSEEEEEESSCCSCGGGSTTHHHHHH
T ss_pred CchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCC--CCCcEEEEECCCCCcCccccCHHHHHH
Confidence 00112467889999999999999999999999988773 457899999999998755556888999
Q ss_pred HHHHHHHHh
Q 004067 767 RIWEFIERT 775 (776)
Q Consensus 767 ~~~~fl~~~ 775 (776)
.+.+||++|
T Consensus 273 ~i~~FL~~H 281 (281)
T 4fbl_A 273 RSLAFIRKH 281 (281)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 999999986
No 25
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.90 E-value=2.3e-23 Score=213.33 Aligned_cols=227 Identities=18% Similarity=0.190 Sum_probs=171.5
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+.+.++. +|.++.++++.|. +.|+||++||++++.. .+..++..|+++||.|+++|+||+|.+.
T Consensus 6 ~~~~~~~~-~g~~l~~~~~~p~-------~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~g~s~ 70 (290)
T 3ksr_A 6 LSSIEIPV-GQDELSGTLLTPT-------GMPGVLFVHGWGGSQH-------HSLVRAREAVGLGCICMTFDLRGHEGYA 70 (290)
T ss_dssp EEEEEEEE-TTEEEEEEEEEEE-------SEEEEEEECCTTCCTT-------TTHHHHHHHHTTTCEEECCCCTTSGGGG
T ss_pred eeeEEecC-CCeEEEEEEecCC-------CCcEEEEeCCCCCCcC-------cHHHHHHHHHHCCCEEEEeecCCCCCCC
Confidence 45677776 7889999999986 4599999999876543 3455688899999999999999999886
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc----c
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY----D 679 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~----~ 679 (776)
......... ...+|+.++++++.++..++.++++|+||||||++++.++.++| ++++++.+|....... .
T Consensus 71 ~~~~~~~~~----~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~ 144 (290)
T 3ksr_A 71 SMRQSVTRA----QNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPK 144 (290)
T ss_dssp GGTTTCBHH----HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBH
T ss_pred CCcccccHH----HHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhccc
Confidence 543221111 23689999999999887788889999999999999999999988 6677777776542210 0
Q ss_pred ccc-----cccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCC
Q 004067 680 TFY-----TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 754 (776)
Q Consensus 680 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 754 (776)
..+ ...+... ...+...+....+.++++|+|+++|+.|..+++..+..+++.+...+ +++++++++++|.
T Consensus 145 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 219 (290)
T 3ksr_A 145 VSLNADPDLMDYRRR----ALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIAGADHA 219 (290)
T ss_dssp HHHHHSTTHHHHTTS----CCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEETTCCTT
T ss_pred ccccCChhhhhhhhh----hhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcCCCCCC
Confidence 000 0011111 11122334556678889999999999999999999999999886654 6899999999998
Q ss_pred CCCCCcHHHHHHHHHHHHHHhC
Q 004067 755 PRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 755 ~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+........+.+.+.+||++++
T Consensus 220 ~~~~~~~~~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 220 LSVKEHQQEYTRALIDWLTEMV 241 (290)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHh
Confidence 8666677889999999998763
No 26
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=8.8e-22 Score=237.80 Aligned_cols=381 Identities=10% Similarity=-0.010 Sum_probs=245.0
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..|+||| ++|||.+. .+||+|++++++.++++.+.. .+..+.|||
T Consensus 17 ~~~~~~S~--~~iaf~~~------~~l~~~~~~gg~~~~lt~~~~------------------------~v~~~~~SP-- 62 (1045)
T 1k32_A 17 LLNPDIHG--DRIIFVCC------DDLWEHDLKSGSTRKIVSNLG------------------------VINNARFFP-- 62 (1045)
T ss_dssp CEEEEEET--TEEEEEET------TEEEEEETTTCCEEEEECSSS------------------------EEEEEEECT--
T ss_pred EeCcEEeC--CEEEEEEC------CcEEEEECCCCcEEEeeeCCC------------------------cccCeEECC--
Confidence 47899995 59999986 269999999999999997533 678999999
Q ss_pred CCceEEEEeCC-------CcEEEEeCCCCccceecCCCCCCCc-------cCceeCCCCCEEEEEECC--------cEEE
Q 004067 137 SKKKIIMVPLP-------DGIYFQDLSCSKPELKLSSSSCSPV-------IDPHLSSDGTMIAFVRDC--------ELHV 194 (776)
Q Consensus 137 ~dg~~l~~~~~-------~~l~~~d~~~~~~~~~l~~~~~~~~-------~~~~~SpDg~~la~~~~~--------~l~~ 194 (776)
||++|+|... .+||+||+.+++.+ +|+.+... + ..++|||||+ ++|++.. +||.
T Consensus 63 -DG~~la~~s~~~~~~~~~~i~~~d~~~g~~~-~lt~~~~~-~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~ 138 (1045)
T 1k32_A 63 -DGRKIAIRVMRGSSLNTADLYFYNGENGEIK-RITYFSGK-STGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYR 138 (1045)
T ss_dssp -TSSEEEEEEEESTTCCEEEEEEEETTTTEEE-ECCCCCEE-EETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEE
T ss_pred -CCCEEEEEEeeccCCCCCeEEEEECCCCCeE-EcccCCCc-ccccccccccccCCCCCE-EEEEECCcCCCcccceEEE
Confidence 9999999832 37999999999987 88776543 4 6899999999 8888763 4999
Q ss_pred EecCCCceeEEeeCCCCCce------ec-----------------CCccccee---------cccCCcceEEECCCCCeE
Q 004067 195 LNLLINEQRQLTHGANGNTV------TH-----------------GLAEYIAQ---------EEMDRKTGYWWSLDSKFI 242 (776)
Q Consensus 195 ~~l~~g~~~~lt~~~~~~~~------~~-----------------~~~~~~~~---------~~~~~~~~~~wspDg~~l 242 (776)
+++++|+.++++........ .. ...-|... ..-..+..+.|++| .+
T Consensus 139 ~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l 216 (1045)
T 1k32_A 139 VENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RI 216 (1045)
T ss_dssp EEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EE
T ss_pred EECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EE
Confidence 99999988877654221000 00 00001111 01123456788887 78
Q ss_pred EEEEecCCCCCeEEEeecCCCCCCC---CCcceecCCCCCCCCC---eEEEEEEEcCCCceEEEEcccCCC--CCCCCcc
Q 004067 243 AFTQVDSSEIPRFRIMHQGKSSVGS---EAQEDHAYPFAGASNV---KVRLGVVSAAGGPVSWMDLQCGGT--DQNYDEE 314 (776)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~---~~~l~~~d~~~~~~~~l~~~~~~~--~~~~~~~ 314 (776)
+|.+...+....+.+...+...... .......++.+|.... ...|++|++++++...+....... ....+..
T Consensus 217 ~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~ 296 (1045)
T 1k32_A 217 YFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIP 296 (1045)
T ss_dssp EEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECG
T ss_pred EEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCccccccccccccc
Confidence 8877655555556555433321100 1111223333333211 235888988666655332110000 0001123
Q ss_pred eEEEEEec-cCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCce
Q 004067 315 YLARVNWM-HGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 393 (776)
Q Consensus 315 ~~~~~~~S-pDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~ 393 (776)
.+..++|| |||+.|++.. ...|+++++.++..+.+..+... .. ....| + ++..+++.++ ..
T Consensus 297 ~v~~~~~S~pdG~~la~~~-----~~~i~~~~~~~~~~~~~~~~~~~-~~-~~~~~-------s-dg~~l~~~s~---~~ 358 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-----RGQAFIQDVSGTYVLKVPEPLRI-RY-VRRGG-------D-TKVAFIHGTR---EG 358 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-----TTEEEEECTTSSBEEECSCCSCE-EE-EEECS-------S-SEEEEEEEET---TE
T ss_pred ccceeeecCCCCCEEEEEE-----cCEEEEEcCCCCceEEccCCCcc-eE-EeeeE-------c-CCCeEEEEEC---CC
Confidence 46789999 9999888776 23699999998887765433220 00 00111 3 3445777666 34
Q ss_pred EEE-EEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeec-CCCC-eEEE
Q 004067 394 HLY-LHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGKG-KHVA 470 (776)
Q Consensus 394 ~l~-~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~-~~~~-~~~~ 470 (776)
+|| ++++++++.++++.+...+..+ .|||||++|++.+.. ..|+.+++. .| ..+.+. .+.+ +..+
T Consensus 359 ~l~~~~d~~~~~~~~l~~~~~~~~~~-~~SpDG~~la~~~~~-----~~v~~~d~~-tg-----~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKFEENLGNVFAM-GVDRNGKFAVVANDR-----FEIMTVDLE-TG-----KPTVIERSREAMITDF 426 (1045)
T ss_dssp EEEEEEETTTCCEEECCCCCCSEEEE-EECTTSSEEEEEETT-----SEEEEEETT-TC-----CEEEEEECSSSCCCCE
T ss_pred ceEEEEECCCCCceEecCCccceeee-EECCCCCEEEEECCC-----CeEEEEECC-CC-----ceEEeccCCCCCccce
Confidence 899 9999999888888544555554 499999999887654 256667763 23 344444 3333 4678
Q ss_pred EEcCCcCEEEEEeeCC------CCCCEEEEEEcCCCceeEeecc
Q 004067 471 VLDHNMRNFVDFHDSL------DSPPRILLCSLQDGSLVLPLYE 508 (776)
Q Consensus 471 ~~spdg~~l~~~~~~~------~~~~~i~~~~~~~~~~~~~l~~ 508 (776)
+|||||++|++..... .....|+++|..+++ .+.++.
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~ 469 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT 469 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC
Confidence 9999999999987653 345689999998776 455543
No 27
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.90 E-value=5e-22 Score=213.19 Aligned_cols=306 Identities=12% Similarity=0.113 Sum_probs=203.0
Q ss_pred eeeEEEeecCCCceEEEEeCC----CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC-cEEEEecCCCc
Q 004067 127 VTRYEWVKTSSKKKIIMVPLP----DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC-ELHVLNLLINE 201 (776)
Q Consensus 127 ~~~~~~sp~~~dg~~l~~~~~----~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~-~l~~~~l~~g~ 201 (776)
+..+.||| ||++|+|..+ ..||++|+++++.+ .++.........+.|||||++|+|++.. +||++++++++
T Consensus 38 ~~~~~~Sp---dG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQ---DGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCT---TSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCCC---CCCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 45678999 9999999843 37999999999988 7776543323348999999999999875 59999999999
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC-
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA- 280 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 280 (776)
.++++..+.. |+|||+.|+|...+.. ..+... ...+..++.
T Consensus 114 ~~~~~~~~~~-----------------------~~~~g~~l~~~~~~~~----~~~~~~-----------~~~~spdg~~ 155 (396)
T 3c5m_A 114 EQVIYTVDEE-----------------------WKGYGTWVANSDCTKL----VGIEIL-----------KRDWQPLTSW 155 (396)
T ss_dssp EEEEEECCTT-----------------------EEEEEEEEECTTSSEE----EEEEEE-----------GGGCCCCCSH
T ss_pred cEEEEecccc-----------------------cCCCCCEEEeccCCcc----cccccc-----------ccccCCCCcc
Confidence 8888764432 6677776666432100 000000 000011111
Q ss_pred --------CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc-CCeEEEEEEeecCc--eEEEEEEECCCC
Q 004067 281 --------SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQT--KLKVLKFDIKTG 349 (776)
Q Consensus 281 --------~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~--~~~l~~~d~~~g 349 (776)
......|+++|+++++...+.. ....+..+.||| ||+.|++....... ...|+++|++++
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~---------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 156 EKFAEFYHTNPTCRLIKVDIETGELEVIHQ---------DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp HHHHHHHHTCCCEEEEEEETTTCCEEEEEE---------ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC
T ss_pred eeeeeeccCCCcceEEEEECCCCcEEeecc---------CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC
Confidence 0233679999999998877732 334577899999 88888887652211 157999999988
Q ss_pred ceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceE--EEEEeCCCceeeccccCCeEEEEEEeecC-CCc
Q 004067 350 QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRH--LYLHDINGTCLGPITEGDWMVEQIVGVNE-ASG 426 (776)
Q Consensus 350 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~--l~~~~~~g~~~~~lt~~~~~~~~~~~~s~-dg~ 426 (776)
+.+.++... ..+......|+| ++..+++.+...+... |++|++++++.++++..... . ..|++ ||+
T Consensus 227 ~~~~l~~~~-~~~~~~~~~~sp-------dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~--~-~~~s~~dg~ 295 (396)
T 3c5m_A 227 NVRKIKEHA-EGESCTHEFWIP-------DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC--S-HLMSNFDGS 295 (396)
T ss_dssp CCEESSCCC-TTEEEEEEEECT-------TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE--E-EEEECSSSS
T ss_pred ceeEeeccC-CCccccceEECC-------CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC--C-CCccCCCCc
Confidence 877765521 122222223433 3445788877666545 99999998887777654321 2 45999 999
Q ss_pred EEEEEEccCCC------------ceeeEEEEEeCCCCCCccccceeecCCCC------------eEEEEEcCCcCEEEEE
Q 004067 427 QVYFTGTLDGP------------LESHLYCAKLYPDWNHTLEAPVKLTNGKG------------KHVAVLDHNMRNFVDF 482 (776)
Q Consensus 427 ~i~~~~~~~~~------------~~~~l~~~~~~~~g~~~~~~~~~l~~~~~------------~~~~~~spdg~~l~~~ 482 (776)
.+++.... .| ....||.+++. +. ..++|+.... ...+.|||||++|++.
T Consensus 296 ~l~~~~~~-~p~~~~~~~~~~~~~~~~i~~~d~~--~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 368 (396)
T 3c5m_A 296 LMVGDGCD-APVDVADADSYNIENDPFLYVLNTK--AK----SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFT 368 (396)
T ss_dssp EEEEEECC-C----------CCCCCCEEEEEETT--TT----BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred eEEEecCC-cceeeccccccccCCCCcEEEEecc--cC----ceEEccCCCCccccccccccCCCCCceEccCCCeEEEE
Confidence 77765432 11 23578999983 32 4556665433 3456999999999998
Q ss_pred eeCCCCCCEEEEEEcCCCce
Q 004067 483 HDSLDSPPRILLCSLQDGSL 502 (776)
Q Consensus 483 ~~~~~~~~~i~~~~~~~~~~ 502 (776)
.... ..++||+++..++..
T Consensus 369 s~~~-~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 369 SDFE-GVPAIYIADVPESYK 387 (396)
T ss_dssp ECTT-SSCEEEEEECCTTCC
T ss_pred ecCC-CCceEEEEEEccccc
Confidence 7654 457999999877663
No 28
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.90 E-value=5.4e-23 Score=203.41 Aligned_cols=211 Identities=17% Similarity=0.158 Sum_probs=162.6
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCch
Q 004067 525 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 604 (776)
Q Consensus 525 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~ 604 (776)
+.+.+++.+|..+.++++.|++ ++.|+||++||..+... .+..++..|+++||.|+++|+||+|.++.
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~-----~~~p~vv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 71 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK-----APAPVIVIAQDIFGVNA-------FMRETVSWLVDQGYAAVCPDLYARQAPGT 71 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS-----CSEEEEEEECCTTBSCH-------HHHHHHHHHHHTTCEEEEECGGGGTSTTC
T ss_pred ceEEEecCCCCeEEEEEECCCC-----CCCCEEEEEcCCCCCCH-------HHHHHHHHHHhCCcEEEeccccccCCCcc
Confidence 4567888899999999999875 47899999999766533 23456788999999999999999987753
Q ss_pred hhhhh-----------hhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 605 KFEAS-----------IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 605 ~~~~~-----------~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
..... ..........+|+.++++++.++..++ ++++++|||+||.+++.++..+| ++++++..|..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~ 148 (236)
T 1zi8_A 72 ALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVG 148 (236)
T ss_dssp BCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSS
T ss_pred cccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcc
Confidence 21100 001011123678899999998776544 69999999999999999999988 78888877642
Q ss_pred CcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCC
Q 004067 674 SWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 753 (776)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 753 (776)
.. +....+.+++.|+|+++|++|..+++..+..+++.+.+.+ +++++++++++|
T Consensus 149 ~~-------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H 202 (236)
T 1zi8_A 149 LE-------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHWYEEAGH 202 (236)
T ss_dssp GG-------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEEETTCCT
T ss_pred cc-------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEEECCCCc
Confidence 11 1234567788999999999999999999999999986655 899999999999
Q ss_pred CCCCCC-------cHHHHHHHHHHHHHHhC
Q 004067 754 MPRRHR-------DRIYMEERIWEFIERTL 776 (776)
Q Consensus 754 ~~~~~~-------~~~~~~~~~~~fl~~~l 776 (776)
.+.... ..+++++.+.+||+++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l 232 (236)
T 1zi8_A 203 SFARTGSSGYVASAAALANERTLDFLVPLQ 232 (236)
T ss_dssp TTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred ccccCCCCccCHHHHHHHHHHHHHHHHHhc
Confidence 874432 24678999999999875
No 29
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=2.3e-22 Score=234.06 Aligned_cols=291 Identities=12% Similarity=0.063 Sum_probs=196.2
Q ss_pred CCceeEcCCCCEEEEEeCCCCcC----cceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSL----SRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
+.+++|||||++|+|.+...... ..+||+||+++++.++++.... ....+..+.|
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~---------------------~~~~~~~~~~ 121 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV---------------------SNAKLQYAGW 121 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC---------------------CSCCCSBCCB
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc---------------------ccccccccEE
Confidence 58899999999999998754321 3689999999999877764221 0112667899
Q ss_pred eecCCCceEEEEeCCCcEEEEeCCCCccceecCCCCCCCc------------------cCceeCCCCCEEEEEECC----
Q 004067 133 VKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPV------------------IDPHLSSDGTMIAFVRDC---- 190 (776)
Q Consensus 133 sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~------------------~~~~~SpDg~~la~~~~~---- 190 (776)
|| ||++|+|..+++||+||+.+++.+ +++......+ ..+.|||||+.|+|.+.+
T Consensus 122 SP---dG~~la~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~ 197 (723)
T 1xfd_A 122 GP---KGQQLIFIFENNIYYCAHVGKQAI-RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRV 197 (723)
T ss_dssp CS---STTCEEEEETTEEEEESSSSSCCE-EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTS
T ss_pred CC---CCCEEEEEECCeEEEEECCCCceE-EEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCcc
Confidence 99 999999998899999999999888 6655422112 569999999999998732
Q ss_pred -------------------------------cEEEEecCCCce-eEEeeCCCCCceecCCcccceecccCCcceEEECCC
Q 004067 191 -------------------------------ELHVLNLLINEQ-RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD 238 (776)
Q Consensus 191 -------------------------------~l~~~~l~~g~~-~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD 238 (776)
.|+++++++++. ++++..... .... ..+..++||||
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~----~~~~--------~~~~~~~~SpD 265 (723)
T 1xfd_A 198 PIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDP----RMRE--------YYITMVKWATS 265 (723)
T ss_dssp CEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCG----GGSS--------EEEEEEEESSS
T ss_pred ceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccC----CCcc--------ceeEEEEEeCC
Confidence 688999988874 555422100 0000 01346889999
Q ss_pred CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceE--
Q 004067 239 SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYL-- 316 (776)
Q Consensus 239 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~-- 316 (776)
|+.|++...... ....|++||+++++...+... .....+
T Consensus 266 g~~l~~~~~~~~--------------------------------~~~~i~~~d~~~g~~~~~~~~-------~~~~~~~~ 306 (723)
T 1xfd_A 266 TKVAVTWLNRAQ--------------------------------NVSILTLCDATTGVCTKKHED-------ESEAWLHR 306 (723)
T ss_dssp SEEEEEEEETTS--------------------------------CEEEEEEEETTTCCEEEEEEE-------ECSSCCCC
T ss_pred CeEEEEEEcCCC--------------------------------CeEEEEEEeCCCCcceEEEEe-------ccCCEEec
Confidence 998876653211 226789999999987665321 111111
Q ss_pred --EEEEeccCCeEEEEE-EeecC---ceEEEEEEE-CCCCc---eEEEEEeccCceeecc-cccccCCCCccccCCeEEE
Q 004067 317 --ARVNWMHGNILTAQV-LNRSQ---TKLKVLKFD-IKTGQ---RKVILVEELDSWVNLH-DCFTPLDKGVTKYSGGFIW 385 (776)
Q Consensus 317 --~~~~~SpDg~~l~~~-~~~~~---~~~~l~~~d-~~~g~---~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 385 (776)
..+.|||||+.|++. +.+.. ....|++|| ..++. .+.++..... ... ..|+| +++.++|
T Consensus 307 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~---~~~~~~~sp-------dg~~l~~ 376 (723)
T 1xfd_A 307 QNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWD---VTKILAYDE-------KGNKIYF 376 (723)
T ss_dssp CCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSC---EEEEEEEET-------TTTEEEE
T ss_pred cCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeE---EEeeeEEcC-------CCCEEEE
Confidence 368999999988776 43332 156899999 57776 6666532211 110 12333 4555777
Q ss_pred EeccC--CceEEEEEeCCCc-eeecccc---CCeEEEEEEeecCCCcEEEEEEcc
Q 004067 386 ASEKT--GFRHLYLHDINGT-CLGPITE---GDWMVEQIVGVNEASGQVYFTGTL 434 (776)
Q Consensus 386 ~s~~~--g~~~l~~~~~~g~-~~~~lt~---~~~~~~~~~~~s~dg~~i~~~~~~ 434 (776)
.+..+ +..+||.++++++ +.+.|+. +...+..+ .|||||+++++....
T Consensus 377 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~spdg~~l~~~~~~ 430 (723)
T 1xfd_A 377 LSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSA-SFSHSMDFFLLKCEG 430 (723)
T ss_dssp EESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEE-EECTTSSEEEEECCS
T ss_pred EEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEE-EECCCCCEEEEEccC
Confidence 77665 6778999998876 5666764 23333344 499999999888654
No 30
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.90 E-value=4.6e-22 Score=214.58 Aligned_cols=219 Identities=19% Similarity=0.187 Sum_probs=162.4
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccC
Q 004067 536 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 615 (776)
Q Consensus 536 ~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~ 615 (776)
.+.+.++.|++. ++.|+||++||+++.. +...+..|+++||+|+++|+||+|++.... .
T Consensus 144 ~l~~~l~~P~~~----~~~P~Vv~~hG~~~~~---------~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~--------~ 202 (422)
T 3k2i_A 144 RVRATLFLPPGP----GPFPGIIDIFGIGGGL---------LEYRASLLAGHGFATLALAYYNFEDLPNNM--------D 202 (422)
T ss_dssp TEEEEEEECSSS----CCBCEEEEECCTTCSC---------CCHHHHHHHTTTCEEEEEECSSSTTSCSSC--------S
T ss_pred cEEEEEEcCCCC----CCcCEEEEEcCCCcch---------hHHHHHHHHhCCCEEEEEccCCCCCCCCCc--------c
Confidence 589999999763 5789999999976541 122478899999999999999998765432 2
Q ss_pred CccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccccccc----------
Q 004067 616 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK---------- 685 (776)
Q Consensus 616 ~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------- 685 (776)
....+|+.++++++.++..++.++|+|+||||||.+++.++.++|+ ++++|+.+|..........+...
T Consensus 203 ~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (422)
T 3k2i_A 203 NISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLR 281 (422)
T ss_dssp CEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGG
T ss_pred cCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchh
Confidence 2457899999999999888888999999999999999999999998 88988888765321100000000
Q ss_pred -cc---------CCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHH-HHHHHHHHHCCCC-eEEEEecCCCC
Q 004067 686 -YM---------GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHT-ARLINALVAARKP-YEILIFPDERH 753 (776)
Q Consensus 686 -~~---------~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~-~~~~~~l~~~~~~-~~~~~~~~~~H 753 (776)
.. ..................+.++++|+|+++|++|.++|.... ..+.+.+.+.+.+ +++++||+++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH 361 (422)
T 3k2i_A 282 RIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 361 (422)
T ss_dssp GCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCS
T ss_pred hcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 00 000000000111222334678899999999999999998855 6888999998887 99999999999
Q ss_pred CCCCC---------------------------CcHHHHHHHHHHHHHHhC
Q 004067 754 MPRRH---------------------------RDRIYMEERIWEFIERTL 776 (776)
Q Consensus 754 ~~~~~---------------------------~~~~~~~~~~~~fl~~~l 776 (776)
.+..+ ...+++++.+.+||+++|
T Consensus 362 ~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L 411 (422)
T 3k2i_A 362 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL 411 (422)
T ss_dssp CCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 97322 447789999999999986
No 31
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.90 E-value=2.7e-22 Score=203.65 Aligned_cols=231 Identities=15% Similarity=0.039 Sum_probs=168.6
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhh
Q 004067 527 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 606 (776)
Q Consensus 527 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~ 606 (776)
..+...+|..+.+++..|... ...++.|+||++||++..... ...+..++..|+++||.|+++|+||+|.+....
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~-~~~~~~p~vv~~HGgg~~~~~----~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~ 91 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQ-NENYTFPAIIICPGGGYQHIS----QRESDPLALAFLAQGYQVLLLNYTVMNKGTNYN 91 (276)
T ss_dssp EECCCBTTBEEEEECCCC-------CCBCEEEEECCSTTTSCC----GGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSC
T ss_pred ccccCCCCeEEEEEEeCCccc-ccCCCCCEEEEEcCCccccCC----chhhHHHHHHHHHCCCEEEEecCccCCCcCCCC
Confidence 445566888888877766542 122578999999996533221 123445678899999999999999998754211
Q ss_pred hhhhhhccCCccHHHHHHHHHHHHHcC---CCCCCcEEEEeechHHHHHHHHHhh-CCCceEEEEEcCCCCCcccccccc
Q 004067 607 EASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDGYDTFY 682 (776)
Q Consensus 607 ~~~~~~~~~~~~~~D~~~~i~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~-~~~~~~~~v~~~~~~~~~~~~~~~ 682 (776)
.. . ....|+.++++++.++. .+|.++|+|+||||||.+++.++.+ .+..++++++.+|+.++.......
T Consensus 92 ~~---~----~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~ 164 (276)
T 3hxk_A 92 FL---S----QNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSD 164 (276)
T ss_dssp TH---H----HHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSS
T ss_pred cC---c----hHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcc
Confidence 10 0 13678999999998863 3788899999999999999999998 788899999998877643220000
Q ss_pred --cccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCC-
Q 004067 683 --TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHR- 759 (776)
Q Consensus 683 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~- 759 (776)
...++ +. +. ...++...+.++.+|+|++||++|..+|+..+..+++.+++.+.+++++++++++|.+....
T Consensus 165 ~~~~~~~--~~---~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 238 (276)
T 3hxk_A 165 LSHFNFE--IE---NI-SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANR 238 (276)
T ss_dssp SSSSCCC--CS---CC-GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCST
T ss_pred hhhhhcC--ch---hh-hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCc
Confidence 01111 11 11 34556667778889999999999999999999999999999999999999999999874322
Q ss_pred -----------cHHHHHHHHHHHHHHh
Q 004067 760 -----------DRIYMEERIWEFIERT 775 (776)
Q Consensus 760 -----------~~~~~~~~~~~fl~~~ 775 (776)
...++.+.+.+||+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~wl~~~ 265 (276)
T 3hxk_A 239 TTAPSDAYCLPSVHRWVSWASDWLERQ 265 (276)
T ss_dssp TSCSSSTTCCHHHHTHHHHHHHHHHHH
T ss_pred cccccccccCchHHHHHHHHHHHHHhC
Confidence 3477889999999875
No 32
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=6.3e-21 Score=230.36 Aligned_cols=336 Identities=11% Similarity=0.046 Sum_probs=236.6
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.|||| +|+|.+..++ ..+||.++++++..++++.+ ..+..+.|||
T Consensus 206 v~~~~~s~d--~l~~~~~~dg--~~~l~~~~~~g~~~~~l~~~-------------------------~~~~~~~~Sp-- 254 (1045)
T 1k32_A 206 VSSPVIVGH--RIYFITDIDG--FGQIYSTDLDGKDLRKHTSF-------------------------TDYYPRHLNT-- 254 (1045)
T ss_dssp CEEEEEETT--EEEEEECTTS--SCEEEEEETTSCSCEECCCC-------------------------CSSCEEEEEE--
T ss_pred ccceEEeCC--EEEEEEeccC--ceEEEEEeCCCCcceEecCC-------------------------CCcceeeEcC--
Confidence 468899998 7888887554 46899999999888888753 2345679999
Q ss_pred CCceEEEEeCCCcEEEEeCCCCccceecCCCC----------CCCccCceeC-CCCCEEEEEECCcEEEEecCCCceeEE
Q 004067 137 SKKKIIMVPLPDGIYFQDLSCSKPELKLSSSS----------CSPVIDPHLS-SDGTMIAFVRDCELHVLNLLINEQRQL 205 (776)
Q Consensus 137 ~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~----------~~~~~~~~~S-pDg~~la~~~~~~l~~~~l~~g~~~~l 205 (776)
||++|++..++.||+||+.++... .+.... ...+..+.|| |||+.|++..+.+|+++++.+++.+++
T Consensus 255 -DG~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~ 332 (1045)
T 1k32_A 255 -DGRRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKV 332 (1045)
T ss_dssp -SSSCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEEC
T ss_pred -CCCEEEEEeCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEc
Confidence 999999999999999999665554 444321 1136789999 999999999999999999999987776
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
+..... .+..++|| ||+.|+|.+.+ .
T Consensus 333 ~~~~~~-----------------~~~~~~~s-dg~~l~~~s~~------------------------------------~ 358 (1045)
T 1k32_A 333 PEPLRI-----------------RYVRRGGD-TKVAFIHGTRE------------------------------------G 358 (1045)
T ss_dssp SCCSCE-----------------EEEEECSS-SEEEEEEEETT------------------------------------E
T ss_pred cCCCcc-----------------eEEeeeEc-CCCeEEEEECC------------------------------------C
Confidence 533220 03467899 99999997631 4
Q ss_pred EEE-EEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceee
Q 004067 286 RLG-VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 364 (776)
Q Consensus 286 ~l~-~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 364 (776)
.|+ +|++++++...+ ..+...+..++|||||+.|++... ...|++||+++|+.+.+........
T Consensus 359 ~l~~~~d~~~~~~~~l---------~~~~~~~~~~~~SpDG~~la~~~~----~~~v~~~d~~tg~~~~~~~~~~~~v-- 423 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKF---------EENLGNVFAMGVDRNGKFAVVAND----RFEIMTVDLETGKPTVIERSREAMI-- 423 (1045)
T ss_dssp EEEEEEETTTCCEEEC---------CCCCCSEEEEEECTTSSEEEEEET----TSEEEEEETTTCCEEEEEECSSSCC--
T ss_pred ceEEEEECCCCCceEe---------cCCccceeeeEECCCCCEEEEECC----CCeEEEEECCCCceEEeccCCCCCc--
Confidence 688 999999887766 334456788999999998887763 3479999999999888874322210
Q ss_pred cccccccCCCCccccCCeEEEEeccC-------CceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCC
Q 004067 365 LHDCFTPLDKGVTKYSGGFIWASEKT-------GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP 437 (776)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~s~~~-------g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~ 437 (776)
....|+| ++..+++.+... +...|++||+++++...++.+...+..+ .|++||+.|++.+.....
T Consensus 424 ~~~~~Sp-------DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~-~~spdG~~l~~~s~~~~~ 495 (1045)
T 1k32_A 424 TDFTISD-------NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAP-AFDADSKNLYYLSYRSLD 495 (1045)
T ss_dssp CCEEECT-------TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEE-EECTTSCEEEEEESCCCC
T ss_pred cceEECC-------CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCc-eEcCCCCEEEEEecccCC
Confidence 1112333 333465655432 3469999999999888888876656555 499999999998863221
Q ss_pred -------------ceeeEEEEEeCCCCCCc--------------------cccceeecCCC-CeEEEEEcCCcCEEEE--
Q 004067 438 -------------LESHLYCAKLYPDWNHT--------------------LEAPVKLTNGK-GKHVAVLDHNMRNFVD-- 481 (776)
Q Consensus 438 -------------~~~~l~~~~~~~~g~~~--------------------~~~~~~l~~~~-~~~~~~~spdg~~l~~-- 481 (776)
....+|.+.+..++... ...+..++... .+..+++||||+.++.
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~ 575 (1045)
T 1k32_A 496 PSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVP 575 (1045)
T ss_dssp CEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECC
T ss_pred cCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEec
Confidence 11244555553222111 01233444333 3567899999977775
Q ss_pred -------EeeCCCCCCEEEEEEcCCCce
Q 004067 482 -------FHDSLDSPPRILLCSLQDGSL 502 (776)
Q Consensus 482 -------~~~~~~~~~~i~~~~~~~~~~ 502 (776)
...+...+..|+++|..+++.
T Consensus 576 ~~g~~~~~~~~~~~~~~l~~~d~~~~~~ 603 (1045)
T 1k32_A 576 VHGEFAAYYQGAPEKGVLLKYDVKTRKV 603 (1045)
T ss_dssp CCCSHHHHHHCCCCCEEEEEEETTTCCE
T ss_pred ccCcccccccccCCCceEEEEECCCCcE
Confidence 223455678999999988874
No 33
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.89 E-value=2e-21 Score=223.61 Aligned_cols=321 Identities=13% Similarity=0.043 Sum_probs=215.6
Q ss_pred cccChHhhhcCCCCCCcCCCceeEcCCCCEEEEEeCC-CCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHH
Q 004067 39 VLFSLEEIVQSPLPGYVAPTSIGFSPDDNLITYLLSP-DHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRR 117 (776)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~ia~~~~~-~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 117 (776)
..++.+.+... ...+.+|+||+| .++|++.+ ...+...||.+ ..+++.++++.+... +..
T Consensus 12 ~~~~~~~~~~~----~~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~~~~~------~~~------ 72 (662)
T 3azo_A 12 SPIDAALVASR----SGRPACVGAVGD--EVWWVAPRPAEAGRATLVRR-RADGAEESALPAPWN------VRN------ 72 (662)
T ss_dssp CSCCHHHHHHT----CSCCEEEEEETT--EEEEEEEETTTTTEEEEEEE-CTTSCEEESSCTTCC------BCC------
T ss_pred CCCCHHHHhhc----CCccceeEEcCC--eEEEEecCcccCCcEEEEEE-CCCCCcceeCCCCcc------ccc------
Confidence 34677777762 223489999965 68888762 11224578887 567888888864320 000
Q ss_pred HHHHHhcCCeeeEEEe--ecCCCceE-EEEeC--CCcEEEEeCC--C-CccceecCCCC----CCCccCceeCCCCCEEE
Q 004067 118 ERLRERGLGVTRYEWV--KTSSKKKI-IMVPL--PDGIYFQDLS--C-SKPELKLSSSS----CSPVIDPHLSSDGTMIA 185 (776)
Q Consensus 118 ~~~~~~~~~~~~~~~s--p~~~dg~~-l~~~~--~~~l~~~d~~--~-~~~~~~l~~~~----~~~~~~~~~SpDg~~la 185 (776)
.....+-..+.|+ | ||++ |+|.. +.+||++++. + ++.+ +|+... ......++|||||+.|+
T Consensus 73 ---~~~~~~~~~~~~~~SP---Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~~~~~~~~~~~~~~~~~spDg~~l~ 145 (662)
T 3azo_A 73 ---RVFEYSGFPWAGVPRP---AGGPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLTPVSAVGGGLRWADPVLLPERGEVW 145 (662)
T ss_dssp ---CGGGTCCCCEEEECCS---SSSCEEEEEBTTTCCEEEECTTSTTCCCCE-ECSCCCCSTTCEEEEEEEEETTTTEEE
T ss_pred ---cccccCCccceeeeec---CCCeEEEEEECCCCeEEEEcCCCCCCCCCE-eccCCccCCCCccccCcEECCCCCEEE
Confidence 0000112256676 8 9999 99985 4679999998 6 7777 777632 22367799999999999
Q ss_pred EEECC-----------cEEEEecCC------CceeEEe-eCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEe
Q 004067 186 FVRDC-----------ELHVLNLLI------NEQRQLT-HGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQV 247 (776)
Q Consensus 186 ~~~~~-----------~l~~~~l~~------g~~~~lt-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~ 247 (776)
|++.. +||++++++ ++.++++ ..... +..++|||||++|+|.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~------------------~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 146 CMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRF------------------VTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp EEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSE------------------ECCCEECTTSSEEEEEEE
T ss_pred EEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCc------------------ccCceECCCCCEEEEEEC
Confidence 99853 799999999 8888876 43211 336789999999999885
Q ss_pred cCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC-CC---ceEEEEcccCCCCCCCCcceEEEEEecc
Q 004067 248 DSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA-GG---PVSWMDLQCGGTDQNYDEEYLARVNWMH 323 (776)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~-~~---~~~~l~~~~~~~~~~~~~~~~~~~~~Sp 323 (776)
+.... .-...+|+++|++ +| +...+.. .....+..+.|||
T Consensus 208 ~~~~~----------------------------~~~~~~i~~~d~~~~g~~~~~~~l~~--------~~~~~~~~~~~sp 251 (662)
T 3azo_A 208 DHPRM----------------------------PWEGTELKTARVTEDGRFADTRTLLG--------GPEEAIAQAEWAP 251 (662)
T ss_dssp CTTCC----------------------------TTTCEEEEEEEECTTSCEEEEEEEEE--------ETTBCEEEEEECT
T ss_pred CCCCC----------------------------CCCCcEEEEEEECCCCcccccEEeCC--------CCCceEcceEECC
Confidence 43210 0012679999999 57 5555532 2245678899999
Q ss_pred CCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCcccc-CCeEEEEeccCCceEEEEEeCCC
Q 004067 324 GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKY-SGGFIWASEKTGFRHLYLHDING 402 (776)
Q Consensus 324 Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~g~~~l~~~~~~g 402 (776)
||+ +++.++++ +...||++|+++++.+.++...... ..+.|++....+.+. ++.+++.+.. +..+||.+++++
T Consensus 252 dg~-l~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~---~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 252 DGS-LIVATDRT-GWWNLHRVDPATGAATQLCRREEEF---AGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp TSC-EEEEECTT-SSCEEEEECTTTCCEEESSCCSSBS---SCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred CCe-EEEEECCC-CCeEEEEEECCCCceeecccccccc---cCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 999 66766654 3457999999999888776543221 122333322233333 4668888877 889999999999
Q ss_pred ceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeC
Q 004067 403 TCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY 448 (776)
Q Consensus 403 ~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~ 448 (776)
++.++|+.+...+..+ ++++++.++|.+.... ....||.+++.
T Consensus 326 ~~~~~l~~~~~~~~~~--~s~~~~~~~~~~~~~~-~~~~i~~~d~~ 368 (662)
T 3azo_A 326 GELVDAAGPWTEWAAT--LTVSGTRAVGVAASPR-TAYEVVELDTV 368 (662)
T ss_dssp TEEEECCSSCCEEEEE--EEEETTEEEEEEEETT-EEEEEEEEETT
T ss_pred CcEEEecCCCCeEEEE--EecCCCEEEEEEcCCC-CCCEEEEEECC
Confidence 9899998775555433 3778888888765533 23689999973
No 34
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.89 E-value=1.2e-22 Score=216.81 Aligned_cols=229 Identities=15% Similarity=0.110 Sum_probs=173.6
Q ss_pred CCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 522 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 522 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
...+.+.++. +|.+++++++.|++. ++.|+||++||+.+... .+...+..|+++||+|+++|+||+|.
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~----~~~P~vl~~hG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~rG~G~ 192 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP----GPHPAVIMLGGLESTKE-------ESFQMENLVLDRGMATATFDGPGQGE 192 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS----CCEEEEEEECCSSCCTT-------TTHHHHHHHHHTTCEEEEECCTTSGG
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC----CCCCEEEEeCCCCccHH-------HHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 4688899988 899999999999874 57899999999765533 12223778889999999999999987
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 681 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~ 681 (776)
+... .........++.++++++.++..++.++|+|+|||+||++++.++.+ +++++++|+. |+.++......
T Consensus 193 s~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~ 264 (386)
T 2jbw_A 193 MFEY------KRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDL 264 (386)
T ss_dssp GTTT------CCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGG
T ss_pred CCCC------CCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHh
Confidence 6110 11111223568888999999887888999999999999999999998 8899999999 88776433221
Q ss_pred ccc-------cccCCC--CCCc-cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHH-HHCCCCeEEEEecC
Q 004067 682 YTE-------KYMGLP--SEDP-VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINAL-VAARKPYEILIFPD 750 (776)
Q Consensus 682 ~~~-------~~~~~~--~~~~-~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l-~~~~~~~~~~~~~~ 750 (776)
+.. ...+.. .... ..+...++...+.++++|+|+++|++|. +++..+.++++.+ .. +++++++++
T Consensus 265 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~~ 340 (386)
T 2jbw_A 265 ETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKD 340 (386)
T ss_dssp SCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETT
T ss_pred ccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeCC
Confidence 110 111211 1111 2334556667788999999999999999 9999999999887 43 689999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 751 ERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 751 ~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
++|.+ .....++.+.+.+||+++|
T Consensus 341 ~gH~~--~~~~~~~~~~i~~fl~~~l 364 (386)
T 2jbw_A 341 GDHCC--HNLGIRPRLEMADWLYDVL 364 (386)
T ss_dssp CCGGG--GGGTTHHHHHHHHHHHHHH
T ss_pred CCcCC--ccchHHHHHHHHHHHHHhc
Confidence 99965 4567789999999999874
No 35
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=1.3e-21 Score=228.43 Aligned_cols=289 Identities=11% Similarity=0.105 Sum_probs=203.4
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCC---ceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEe
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTC---KQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWV 133 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~---~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s 133 (776)
+.+++|||||++|+|.+. .+||+||++++ +.++++.+. ..+..+.||
T Consensus 111 v~~~~~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~------------------------~~~~~~~~S 160 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGE------------------------GFATDAKLS 160 (741)
T ss_dssp SCCCEECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSS------------------------SCEEEEEEC
T ss_pred cceeEECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccCC------------------------cccccccCC
Confidence 578999999999999876 46999999998 777776532 357889999
Q ss_pred ecCCCceEEEEeCCCcEEEEeCCCCccceecCCCCCCC----------------ccCceeCCCCCEEEEEEC-C------
Q 004067 134 KTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSP----------------VIDPHLSSDGTMIAFVRD-C------ 190 (776)
Q Consensus 134 p~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~----------------~~~~~~SpDg~~la~~~~-~------ 190 (776)
| ||++|+|..+++||+||+.+++.+ .++...... ...+.|||||++|+|.+. .
T Consensus 161 P---DG~~la~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~ 236 (741)
T 2ecf_A 161 P---KGGFVSFIRGRNLWVIDLASGRQM-QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQ 236 (741)
T ss_dssp T---TSSEEEEEETTEEEEEETTTTEEE-ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEE
T ss_pred C---CCCEEEEEeCCcEEEEecCCCCEE-EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceE
Confidence 9 999999999899999999999887 666543211 367899999999999863 2
Q ss_pred ---------------------------cEEEEecCC-CceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeE
Q 004067 191 ---------------------------ELHVLNLLI-NEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFI 242 (776)
Q Consensus 191 ---------------------------~l~~~~l~~-g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l 242 (776)
.|+++++++ ++.+++........ .+..++| |||+.|
T Consensus 237 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~---------------~~~~~~~-pDg~~l 300 (741)
T 2ecf_A 237 KRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDI---------------YLARVNW-RDPQHL 300 (741)
T ss_dssp EEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSE---------------EEEEEEE-EETTEE
T ss_pred ecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcce---------------EEEEEEe-CCCCEE
Confidence 689999999 88777654311100 1347889 999999
Q ss_pred EEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEec
Q 004067 243 AFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM 322 (776)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~S 322 (776)
++...+... ....|++||+++++...+..... ......+..++||
T Consensus 301 ~~~~~~~~~-------------------------------~~~~i~~~d~~~g~~~~~~~~~~----~~~~~~~~~~~~s 345 (741)
T 2ecf_A 301 SFQRQSRDQ-------------------------------KKLDLVEVTLASNQQRVLAHETS----PTWVPLHNSLRFL 345 (741)
T ss_dssp EEEEEETTS-------------------------------SEEEEEEEETTTCCEEEEEEEEC----SSCCCCCSCCEEC
T ss_pred EEEEecccC-------------------------------CeEEEEEEECCCCceEEEEEcCC----CCcCCcCCceEEC
Confidence 998754321 22679999999998776643210 0000023468999
Q ss_pred cCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeeccc-ccccCCCCccccCCeEEEEeccCC--ceEEEEEe
Q 004067 323 HGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHD-CFTPLDKGVTKYSGGFIWASEKTG--FRHLYLHD 399 (776)
Q Consensus 323 pDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~g--~~~l~~~~ 399 (776)
|||+ +++.++++ +...||.+|++++ .+.++.+..... .. .|+| +++.+++.+..++ ..+||.++
T Consensus 346 pdg~-~~~~~~~~-g~~~l~~~~~~~~-~~~l~~~~~~v~---~~~~~s~-------dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 346 DDGS-ILWSSERT-GFQHLYRIDSKGK-AAALTHGNWSVD---ELLAVDE-------KAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp TTSC-EEEEECTT-SSCEEEEECSSSC-EEESCCSSSCEE---EEEEEET-------TTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCCe-EEEEecCC-CccEEEEEcCCCC-eeeeeecceEEE---eEeEEeC-------CCCEEEEEEeCCCCceEEEEEEE
Confidence 9999 44554443 4467999998776 666655432211 11 1323 3445777776665 66899998
Q ss_pred CCCceeeccccCCeEEEEEEeecCCCcEEEEEEccC-CCceeeEEEEEe
Q 004067 400 INGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD-GPLESHLYCAKL 447 (776)
Q Consensus 400 ~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~-~~~~~~l~~~~~ 447 (776)
.+++..++|+... .+.. +.||+||+.+++..... .| ..+|.+++
T Consensus 413 ~~g~~~~~l~~~~-~~~~-~~~spdg~~l~~~~~~~~~p--~~~~l~~~ 457 (741)
T 2ecf_A 413 LQGGQPQRLSKAP-GMHS-ASFARNASVYVDSWSNNSTP--PQIELFRA 457 (741)
T ss_dssp TTCCCCEECCCSC-SEEE-EEECTTSSEEEEEEEETTEE--EEEEEEET
T ss_pred cCCCCeeecccCC-CceE-EEECCCCCEEEEEecCCCCC--CeEEEEEc
Confidence 8888788888733 3333 45999999999886653 33 45677776
No 36
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.89 E-value=4.9e-22 Score=200.96 Aligned_cols=232 Identities=17% Similarity=0.159 Sum_probs=169.1
Q ss_pred CCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCC
Q 004067 521 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 600 (776)
Q Consensus 521 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g 600 (776)
....+.+.+.. +|.++.++++.|.+ .+.|+||++||.+++.. ...+..++..|+++||.|+++|+||+|
T Consensus 19 ~~~~~~~~~~~-~g~~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~-----~~~~~~~~~~l~~~G~~v~~~d~~G~G 87 (270)
T 3pfb_A 19 FQGMATITLER-DGLQLVGTREEPFG-----EIYDMAIIFHGFTANRN-----TSLLREIANSLRDENIASVRFDFNGHG 87 (270)
T ss_dssp CCEEEEEEEEE-TTEEEEEEEEECSS-----SSEEEEEEECCTTCCTT-----CHHHHHHHHHHHHTTCEEEEECCTTST
T ss_pred eccceEEEecc-CCEEEEEEEEcCCC-----CCCCEEEEEcCCCCCcc-----ccHHHHHHHHHHhCCcEEEEEcccccc
Confidence 33456666665 89999999999875 35799999999776521 123455688899999999999999999
Q ss_pred CCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-
Q 004067 601 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD- 679 (776)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~- 679 (776)
.+.......... ...+|+.++++++.++. +.++++|+||||||++++.++.++|++++++++.+|........
T Consensus 88 ~s~~~~~~~~~~----~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~ 161 (270)
T 3pfb_A 88 DSDGKFENMTVL----NEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDAL 161 (270)
T ss_dssp TSSSCGGGCCHH----HHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHH
T ss_pred CCCCCCCccCHH----HHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhh
Confidence 886543221111 12678889999988765 34599999999999999999999999999999999886532110
Q ss_pred -ccccccccCCCCC---------------CccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCe
Q 004067 680 -TFYTEKYMGLPSE---------------DPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPY 743 (776)
Q Consensus 680 -~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~ 743 (776)
....... ..+.. ....+...+....+.++++|+|+++|++|..+++..+..+.+.+ .++
T Consensus 162 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~ 236 (270)
T 3pfb_A 162 EGNTQGVT-YNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIY----QNS 236 (270)
T ss_dssp HTEETTEE-CCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC----SSE
T ss_pred hhhhhccc-cCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhC----CCC
Confidence 0000000 00000 00112233555667888999999999999999999888887764 568
Q ss_pred EEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 744 EILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 744 ~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+++++++++|.+ ..+...++.+.+.+||+++
T Consensus 237 ~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 237 TLHLIEGADHCF-SDSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp EEEEETTCCTTC-CTHHHHHHHHHHHHHHC--
T ss_pred eEEEcCCCCccc-CccchHHHHHHHHHHHhhc
Confidence 999999999987 4667889999999999764
No 37
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.89 E-value=6.2e-22 Score=214.46 Aligned_cols=219 Identities=19% Similarity=0.223 Sum_probs=160.1
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccC
Q 004067 536 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 615 (776)
Q Consensus 536 ~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~ 615 (776)
.+.+++|.|+.. ++.|+||++||+.+... ...+..|+++||.|+++|+||++++.... .
T Consensus 160 ~l~~~l~~P~~~----~~~P~Vv~lhG~~~~~~---------~~~a~~La~~Gy~Vla~D~rG~~~~~~~~--------~ 218 (446)
T 3hlk_A 160 RVRGTLFLPPEP----GPFPGIVDMFGTGGGLL---------EYRASLLAGKGFAVMALAYYNYEDLPKTM--------E 218 (446)
T ss_dssp TEEEEEEECSSS----CCBCEEEEECCSSCSCC---------CHHHHHHHTTTCEEEEECCSSSTTSCSCC--------S
T ss_pred eEEEEEEeCCCC----CCCCEEEEECCCCcchh---------hHHHHHHHhCCCEEEEeccCCCCCCCcch--------h
Confidence 599999999763 57899999999765421 22378899999999999999988765432 1
Q ss_pred CccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccccccccc--------
Q 004067 616 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM-------- 687 (776)
Q Consensus 616 ~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-------- 687 (776)
....+|+.++++++.++..++.++|+|+||||||.+|+.++.++|+ ++++|+.+|..........+....+
T Consensus 219 ~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (446)
T 3hlk_A 219 TLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRN 297 (446)
T ss_dssp EEEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGG
T ss_pred hCCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchh
Confidence 2347899999999999988888999999999999999999999998 8888888876432110000000000
Q ss_pred ------------CCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHH-HHHHHHHHHHCCCC-eEEEEecCCCC
Q 004067 688 ------------GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINALVAARKP-YEILIFPDERH 753 (776)
Q Consensus 688 ------------~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~l~~~~~~-~~~~~~~~~~H 753 (776)
..................+.++++|+|+++|++|.++++.. +..+.+.+++.+.+ +++++||+++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH 377 (446)
T 3hlk_A 298 RIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 377 (446)
T ss_dssp GCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCS
T ss_pred ccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCC
Confidence 00000000000111122367788999999999999999954 47899999999888 89999999999
Q ss_pred CCC---------------------------CCCcHHHHHHHHHHHHHHhC
Q 004067 754 MPR---------------------------RHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 754 ~~~---------------------------~~~~~~~~~~~~~~fl~~~l 776 (776)
.+. +....+++++.+.+||+++|
T Consensus 378 ~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L 427 (446)
T 3hlk_A 378 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHL 427 (446)
T ss_dssp CCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence 873 11226789999999999986
No 38
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.89 E-value=6e-22 Score=193.88 Aligned_cols=212 Identities=17% Similarity=0.177 Sum_probs=161.9
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
..+.+.++. +|.++.++++.|++ +.|+||++||.++... .| .+..+++.|+++||.|+++|+||+|.+
T Consensus 11 ~~~~~~~~~-~g~~l~~~~~~p~~------~~p~vv~~hG~~~~~~---~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s 78 (223)
T 2o2g_A 11 QEYAVSVSV-GEVKLKGNLVIPNG------ATGIVLFAHGSGSSRY---SP--RNRYVAEVLQQAGLATLLIDLLTQEEE 78 (223)
T ss_dssp CEEEEEEEE-TTEEEEEEEECCTT------CCEEEEEECCTTCCTT---CH--HHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred eeeEEEEec-CCeEEEEEEecCCC------CceEEEEecCCCCCCC---cc--chHHHHHHHHHCCCEEEEEcCCCcCCC
Confidence 467788887 88999999999865 4599999999765533 11 123457888899999999999998765
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccc
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 682 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~ 682 (776)
..................|+.++++++..+..++..+++++|||+||.+++.++..+|++++++++.+|..++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------ 152 (223)
T 2o2g_A 79 EIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------ 152 (223)
T ss_dssp HHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC------
T ss_pred CccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC------
Confidence 43221100000001125788999999998877888999999999999999999999999999999998864321
Q ss_pred cccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHH
Q 004067 683 TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRI 762 (776)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~ 762 (776)
...+.+++.|+|+++|+.|..++... .+.+.+.+.+.+++++++++|.+...+...
T Consensus 153 --------------------~~~~~~~~~P~l~i~g~~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 208 (223)
T 2o2g_A 153 --------------------PSALPHVKAPTLLIVGGYDLPVIAMN----EDALEQLQTSKRLVIIPRASHLFEEPGALT 208 (223)
T ss_dssp --------------------TTTGGGCCSCEEEEEETTCHHHHHHH----HHHHHHCCSSEEEEEETTCCTTCCSTTHHH
T ss_pred --------------------HHHHhcCCCCEEEEEccccCCCCHHH----HHHHHhhCCCeEEEEeCCCCcccCChHHHH
Confidence 12356678999999999999886332 344455578899999999999986656778
Q ss_pred HHHHHHHHHHHHhC
Q 004067 763 YMEERIWEFIERTL 776 (776)
Q Consensus 763 ~~~~~~~~fl~~~l 776 (776)
++.+.+.+||+++|
T Consensus 209 ~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 209 AVAQLASEWFMHYL 222 (223)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999886
No 39
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.89 E-value=3.4e-22 Score=203.76 Aligned_cols=237 Identities=16% Similarity=0.055 Sum_probs=170.4
Q ss_pred CCCceEEEEEcCCCcEEEEEEEcCCCCC--CCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCC
Q 004067 521 LEPPDIVQIQANDGTVLYGALYKPDESR--YGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG 598 (776)
Q Consensus 521 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~--~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg 598 (776)
..+.+.+.+...+|..+.+.+| |+... .+.++.|+||++||++...... ..+..++..|+++||.|+++|+||
T Consensus 16 ~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~~g 90 (283)
T 3bjr_A 16 YFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPV----AQAESLAMAFAGHGYQAFYLEYTL 90 (283)
T ss_dssp -CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCH----HHHHHHHHHHHTTTCEEEEEECCC
T ss_pred CCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCc----cccHHHHHHHHhCCcEEEEEeccC
Confidence 4467788888888888888888 76510 0225789999999965321111 124456788999999999999999
Q ss_pred CCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC---CCCCCcEEEEeechHHHHHHHHHhhCCCc-------------
Q 004067 599 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFPDV------------- 662 (776)
Q Consensus 599 ~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~~~~------------- 662 (776)
++.++..+ .....|+.++++++.+.. .++.++++|+||||||.+++.++.++|+.
T Consensus 91 ~~~~~~~~---------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~ 161 (283)
T 3bjr_A 91 LTDQQPLG---------LAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLK 161 (283)
T ss_dssp TTTCSSCB---------THHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHC
T ss_pred CCccccCc---------hhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCC
Confidence 88763111 112568888899988753 46778999999999999999999999987
Q ss_pred eEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCC
Q 004067 663 FQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 742 (776)
Q Consensus 663 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 742 (776)
++++++.+|..+.... +.... .........+...++...+.++.+|+|+++|++|..+|+..+..+++.+...+.+
T Consensus 162 ~~~~v~~~p~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~ 237 (283)
T 3bjr_A 162 PNNVVLGYPVISPLLG---FPKDD-ATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIP 237 (283)
T ss_dssp CSSEEEESCCCCTTSB---C---------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCC
T ss_pred ccEEEEcCCccccccc---ccccc-chHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCC
Confidence 8899999888753211 00000 0000011123344566667788899999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCCCCC------------cHHHHHHHHHHHHHHh
Q 004067 743 YEILIFPDERHMPRRHR------------DRIYMEERIWEFIERT 775 (776)
Q Consensus 743 ~~~~~~~~~~H~~~~~~------------~~~~~~~~~~~fl~~~ 775 (776)
++++++++++|.+.... ...++.+.+.+||+++
T Consensus 238 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 238 YELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp EEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred eEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 99999999999763211 2367889999999875
No 40
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=2.5e-22 Score=233.42 Aligned_cols=298 Identities=9% Similarity=0.057 Sum_probs=196.3
Q ss_pred CCceeEcCCCCEEEEEeCCCC----cCcceEEEEecCCCce---EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeee
Q 004067 57 PTSIGFSPDDNLITYLLSPDH----SLSRKVFSFDPKTCKQ---ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTR 129 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~----~~~~~l~~~~~~~~~~---~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 129 (776)
+.+++|||||++|+|.+...+ ....+||+||+++++. +++. ..+..
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---------------------------~~~~~ 114 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---------------------------RPIQY 114 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---------------------------SSBCC
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---------------------------ccccc
Confidence 478999999999999876321 1135899999999987 4443 25678
Q ss_pred EEEeecCCCceEEEEeCCCcEEEEeCCCCccceecCCCCCC------------------CccCceeCCCCCEEEEEECC-
Q 004067 130 YEWVKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCS------------------PVIDPHLSSDGTMIAFVRDC- 190 (776)
Q Consensus 130 ~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~------------------~~~~~~~SpDg~~la~~~~~- 190 (776)
+.||| ||++|+|..+++||+||+.+++.+ +++..... ....+.|||||++|||.+.+
T Consensus 115 ~~~SP---DG~~la~~~~~~i~~~~~~~g~~~-~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 115 LCWSP---VGSKLAYVYQNNIYLKQRPGDPPF-QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp EEECS---STTCEEEEETTEEEEESSTTSCCE-ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred ceECC---CCCEEEEEECCeEEEEeCCCCCcE-EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence 99999 999999999999999999999887 66643211 11479999999999998742
Q ss_pred ----------------------------------cEEEEecCCCcee---EEeeCCCCCceecCCcccceecccCCcceE
Q 004067 191 ----------------------------------ELHVLNLLINEQR---QLTHGANGNTVTHGLAEYIAQEEMDRKTGY 233 (776)
Q Consensus 191 ----------------------------------~l~~~~l~~g~~~---~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (776)
.|+++++++++.+ ++.... ...+.. ..+..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~----~~~~~~--------~~~~~~ 258 (719)
T 1z68_A 191 TDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA----MIASSD--------YYFSWL 258 (719)
T ss_dssp TTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH----HHHTSC--------EEEEEE
T ss_pred CCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc----cCCCCc--------ceEEEe
Confidence 6788888887753 332100 000000 113478
Q ss_pred EECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE----cCCCceEEEEcccCCCCC
Q 004067 234 WWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS----AAGGPVSWMDLQCGGTDQ 309 (776)
Q Consensus 234 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d----~~~~~~~~l~~~~~~~~~ 309 (776)
+|||||+ +++...+... ....|++|| +++++...+.... .
T Consensus 259 ~~SpD~~-~~~~~~~~~~-------------------------------~~~~l~~~d~~~~~~~g~~~~~~~~~----~ 302 (719)
T 1z68_A 259 TWVTDER-VCLQWLKRVQ-------------------------------NVSVLSICDFREDWQTWDCPKTQEHI----E 302 (719)
T ss_dssp EESSSSE-EEEEEEESST-------------------------------TEEEEEEEEECSSSSSEECCGGGEEE----E
T ss_pred EEeCCCe-EEEEEecccc-------------------------------CeEEEEEEcccCCCCCCceEEEEecc----c
Confidence 8999965 6665433221 225789999 8887765442100 0
Q ss_pred CCCcceEE-----EEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEE
Q 004067 310 NYDEEYLA-----RVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFI 384 (776)
Q Consensus 310 ~~~~~~~~-----~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (776)
..+...+. .+.|||||+.+++..........|+++|+++++.+.++......+. .. .++++.++
T Consensus 303 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~---~~--------~~d~~~i~ 371 (719)
T 1z68_A 303 ESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAIN---IF--------RVTQDSLF 371 (719)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEE---EE--------EECSSEEE
T ss_pred ccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEE---EE--------EEeCCEEE
Confidence 01222232 6899999997777655555678899999999887777643222111 00 12466688
Q ss_pred EEecc----CCceEEEEEeCCCc--eeecccc----CCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 385 WASEK----TGFRHLYLHDINGT--CLGPITE----GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 385 ~~s~~----~g~~~l~~~~~~g~--~~~~lt~----~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
|.+.. .+..+||.++++++ +.+.|+. +...+.. ..||+||+++++........ .++..++
T Consensus 372 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~-~~~s~dg~~l~~~~s~~~~p--~~~l~d~ 441 (719)
T 1z68_A 372 YSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYT-ASFSDYAKYYALVCYGPGIP--ISTLHDG 441 (719)
T ss_dssp EEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEE-EEECGGGSSEEEEECCBSSC--EEEEECS
T ss_pred EEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEE-EEECCCCCEEEEEcCCCCCC--eEEEEEC
Confidence 88866 57789999998766 4566664 2222333 35999999988876553322 3444454
No 41
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.88 E-value=1.2e-21 Score=198.90 Aligned_cols=231 Identities=12% Similarity=0.076 Sum_probs=164.3
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCC--CCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESR--YGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~--~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
.+.+.+. .+|..+.+.+|.|+... ...++.|+||++|||+...... ..+..++..|+++||.|+++|+||+|.
T Consensus 4 ~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~~g~g~ 78 (277)
T 3bxp_A 4 VEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSG----REEAPIATRMMAAGMHTVVLNYQLIVG 78 (277)
T ss_dssp EEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCC----TTHHHHHHHHHHTTCEEEEEECCCSTT
T ss_pred eEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCC----ccchHHHHHHHHCCCEEEEEecccCCC
Confidence 4556664 47778999999997310 1225789999999965332211 134456788899999999999999874
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcC---CCCCCcEEEEeechHHHHHHHHHhhC--------------CCceE
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARF--------------PDVFQ 664 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--------------~~~~~ 664 (776)
++..+ .....|+.++++++.+.. .++.++|+|+||||||.+|+.++.++ +..++
T Consensus 79 ~~~~~---------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T 3bxp_A 79 DQSVY---------PWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHA 149 (277)
T ss_dssp TCCCT---------THHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCS
T ss_pred CCccC---------chHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcC
Confidence 43211 123678888898888752 35778999999999999999999985 67799
Q ss_pred EEEEcCCCCCccccc---ccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCC
Q 004067 665 CAVSGAPVTSWDGYD---TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 741 (776)
Q Consensus 665 ~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~ 741 (776)
++++.+|..++.... ..+...+++ .+...++...+.++.+|+|++||++|..+|+..+..+++.+.+.+.
T Consensus 150 ~~v~~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~ 222 (277)
T 3bxp_A 150 AIILGYPVIDLTAGFPTTSAARNQITT-------DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQV 222 (277)
T ss_dssp EEEEESCCCBTTSSSSSSHHHHHHHCS-------CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTC
T ss_pred EEEEeCCcccCCCCCCCccccchhccc-------hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCC
Confidence 999999986532110 000001111 1234456666777788999999999999999999999999999999
Q ss_pred CeEEEEecCCCCCCCCCC--------------cHHHHHHHHHHHHHHh
Q 004067 742 PYEILIFPDERHMPRRHR--------------DRIYMEERIWEFIERT 775 (776)
Q Consensus 742 ~~~~~~~~~~~H~~~~~~--------------~~~~~~~~~~~fl~~~ 775 (776)
+++++++++++|.+.... ...++++.+.+||+++
T Consensus 223 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 270 (277)
T 3bxp_A 223 ATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ 270 (277)
T ss_dssp CEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhc
Confidence 999999999999763322 2577899999999875
No 42
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.88 E-value=1.9e-21 Score=206.71 Aligned_cols=224 Identities=14% Similarity=0.086 Sum_probs=169.5
Q ss_pred CceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccc-cc-c---ccchhhhHHHHhCCcEEEEECC
Q 004067 523 PPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCD-SW-I---NTVDMRAQYLRSKGILVWKLDN 596 (776)
Q Consensus 523 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~-~~-~---~~~~~~~~~l~~~G~~v~~~d~ 596 (776)
..+.+.+... +|..+.+++|.|++.. ..+++|+||++||+++...... .+ . ........+....|+.|+++|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~-~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~ 221 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVN-PDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQC 221 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCC-TTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECC
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCC-CCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecC
Confidence 4677889988 8999999999998742 2368899999999865421000 00 0 0000112344577899999999
Q ss_pred CCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc
Q 004067 597 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 676 (776)
Q Consensus 597 rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~ 676 (776)
||.++++..|........+.....|+.++++++.++..+|.++|+|+||||||++++.++.++|++|+++++.+|..+.
T Consensus 222 ~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~- 300 (380)
T 3doh_A 222 PPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV- 300 (380)
T ss_dssp CTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-
T ss_pred CCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-
Confidence 9988777655432222233456788999999999887788899999999999999999999999999999999887421
Q ss_pred cccccccccccCCCCCCccchhcCChhhhhccCC-CcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCC---C
Q 004067 677 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE---R 752 (776)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~---~ 752 (776)
..+.++. .|+|++||+.|..+|+..+.++++.|++.+.+++++++|++ +
T Consensus 301 ---------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~ 353 (380)
T 3doh_A 301 ---------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEK 353 (380)
T ss_dssp ---------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHH
T ss_pred ---------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccC
Confidence 1233444 89999999999999999999999999999999999999999 4
Q ss_pred CCCCCCCcHHHHHH--HHHHHHHHh
Q 004067 753 HMPRRHRDRIYMEE--RIWEFIERT 775 (776)
Q Consensus 753 H~~~~~~~~~~~~~--~~~~fl~~~ 775 (776)
|.+.........+. .+.+||.++
T Consensus 354 h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 354 HGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp TTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred CCCCCchhHHHhcCCHHHHHHHHhh
Confidence 44433334555566 899999875
No 43
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=1.4e-20 Score=218.28 Aligned_cols=292 Identities=14% Similarity=0.148 Sum_probs=203.2
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.+..++|||| ++|+|... ..||+||+++++.++++.+. ..+..+.|||
T Consensus 83 ~v~~~~~spd-~~~~~~~~------~~i~~~d~~~~~~~~l~~~~------------------------~~~~~~~~Sp- 130 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFTQ------GGLVGFDMLARKVTYLFDTN------------------------EETASLDFSP- 130 (706)
T ss_dssp CCEEEEETTT-TEEEEEET------TEEEEEETTTTEEEEEECCT------------------------TCCTTCEECT-
T ss_pred CceeEEECCC-CeEEEEEC------CEEEEEECCCCceEEccCCc------------------------ccccCCcCCC-
Confidence 3588999999 88888754 46999999999988887532 2466789999
Q ss_pred CCCceEEEEeCCCcEEEEeCCC-----CccceecCCCCCCC--------------ccCceeCCCCCEEEEEEC-------
Q 004067 136 SSKKKIIMVPLPDGIYFQDLSC-----SKPELKLSSSSCSP--------------VIDPHLSSDGTMIAFVRD------- 189 (776)
Q Consensus 136 ~~dg~~l~~~~~~~l~~~d~~~-----~~~~~~l~~~~~~~--------------~~~~~~SpDg~~la~~~~------- 189 (776)
||++|+|..+++||+||+.+ ++.+ .++...... +..+.|||||++|+|.+.
T Consensus 131 --dG~~la~~~~~~i~v~~~~~~~~~~g~~~-~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~ 207 (706)
T 2z3z_A 131 --VGDRVAYVRNHNLYIARGGKLGEGMSRAI-AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKP 207 (706)
T ss_dssp --TSSEEEEEETTEEEEEECBCTTSCCCCCE-ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCC
T ss_pred --CCCEEEEEECCeEEEEecCcccccCCCcE-EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCce
Confidence 99999999999999999999 8887 665543221 378999999999999971
Q ss_pred ---------------------------CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeE
Q 004067 190 ---------------------------CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFI 242 (776)
Q Consensus 190 ---------------------------~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l 242 (776)
..|+++++++++.+++........ .+..++|||||+.|
T Consensus 208 ~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~---------------~~~~~~~spdg~~l 272 (706)
T 2z3z_A 208 TPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK---------------FLTNLSWSPDENIL 272 (706)
T ss_dssp EEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC---------------EEEEEEECTTSSEE
T ss_pred EEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce---------------eEeeEEEECCCCEE
Confidence 359999999998877654321100 03468899999999
Q ss_pred EEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCC-ceEEEEcccCCCCCCCCcceEEEEEe
Q 004067 243 AFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG-PVSWMDLQCGGTDQNYDEEYLARVNW 321 (776)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 321 (776)
++...+... ....|++||++++ +...+..... ......+..+.|
T Consensus 273 ~~~~~~~~~-------------------------------~~~~v~~~d~~~g~~~~~~~~~~~----~~~~~~~~~~~~ 317 (706)
T 2z3z_A 273 YVAEVNRAQ-------------------------------NECKVNAYDAETGRFVRTLFVETD----KHYVEPLHPLTF 317 (706)
T ss_dssp EEEEECTTS-------------------------------CEEEEEEEETTTCCEEEEEEEEEC----SSCCCCCSCCEE
T ss_pred EEEEeCCCC-------------------------------CeeEEEEEECCCCceeeEEEEccC----CCeECccCCcee
Confidence 997754321 2267899999999 5555532100 011112345799
Q ss_pred cc--CCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCC--ceEEEE
Q 004067 322 MH--GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG--FRHLYL 397 (776)
Q Consensus 322 Sp--Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g--~~~l~~ 397 (776)
|| ||++++ ..+++ +...||.+|.+++..+.++.+...... ...|+| +++.+++.+..++ ..+||.
T Consensus 318 sp~~dg~~l~-~~~~~-g~~~l~~~~~~~~~~~~l~~~~~~v~~--~~~~sp-------dg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 318 LPGSNNQFIW-QSRRD-GWNHLYLYDTTGRLIRQVTKGEWEVTN--FAGFDP-------KGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp CTTCSSEEEE-EECTT-SSCEEEEEETTSCEEEECCCSSSCEEE--EEEECT-------TSSEEEEEESSSCTTCBEEEE
T ss_pred ecCCCCEEEE-EEccC-CccEEEEEECCCCEEEecCCCCeEEEe--eeEEcC-------CCCEEEEEecCCCCceEEEEE
Confidence 99 998554 44443 456799999877777777654322110 012333 3445777776654 579999
Q ss_pred EeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEcc-CCCceeeEEEEEe
Q 004067 398 HDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL-DGPLESHLYCAKL 447 (776)
Q Consensus 398 ~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~-~~~~~~~l~~~~~ 447 (776)
+++++++.+.++... .+.. +.|||||++|++.... ..+ ..+|.+++
T Consensus 387 ~d~~~~~~~~l~~~~-~~~~-~~~spdg~~l~~~~~~~~~p--~~i~l~d~ 433 (706)
T 2z3z_A 387 IDIKGGKTKDLTPES-GMHR-TQLSPDGSAIIDIFQSPTVP--RKVTVTNI 433 (706)
T ss_dssp EETTCCCCEESCCSS-SEEE-EEECTTSSEEEEEEECSSCS--CEEEEEES
T ss_pred EEcCCCCceeccCCC-ceEE-EEECCCCCEEEEEecCCCCC--cEEEEEEC
Confidence 999988888887543 3444 4599999998888554 334 35666676
No 44
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.88 E-value=4.5e-22 Score=208.46 Aligned_cols=237 Identities=16% Similarity=0.113 Sum_probs=170.0
Q ss_pred CCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCC
Q 004067 521 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 600 (776)
Q Consensus 521 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g 600 (776)
....+.+.+++.+|.++.++++.|++. .++.|+||++||+++... .+ .....++++||+|+++|+||+|
T Consensus 65 ~~~~~~~~~~~~dg~~i~~~~~~P~~~---~~~~p~vv~~HG~g~~~~---~~-----~~~~~l~~~G~~v~~~d~rG~g 133 (337)
T 1vlq_A 65 TVEAYDVTFSGYRGQRIKGWLLVPKLE---EEKLPCVVQYIGYNGGRG---FP-----HDWLFWPSMGYICFVMDTRGQG 133 (337)
T ss_dssp SEEEEEEEEECGGGCEEEEEEEEECCS---CSSEEEEEECCCTTCCCC---CG-----GGGCHHHHTTCEEEEECCTTCC
T ss_pred CeEEEEEEEEcCCCCEEEEEEEecCCC---CCCccEEEEEcCCCCCCC---Cc-----hhhcchhhCCCEEEEecCCCCC
Confidence 445788999988999999999999763 157899999999766532 11 2245678899999999999999
Q ss_pred CCchhh--hh---------------hhhhccC----CccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC
Q 004067 601 RRGLKF--EA---------------SIKHNCG----RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 659 (776)
Q Consensus 601 ~~~~~~--~~---------------~~~~~~~----~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~ 659 (776)
.++... .. ....... ...++|+.++++++.++..+|.++|+|+|||+||.+++.++..+
T Consensus 134 ~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~ 213 (337)
T 1vlq_A 134 SGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALS 213 (337)
T ss_dssp CSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHC
T ss_pred CcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcC
Confidence 664320 00 0000000 02478999999999998888889999999999999999999998
Q ss_pred CCceEEEEEcCCCCC-cccccc-----ccc--cccc-CCCCCCc---cchhcCChhhhhccCCCcEEEEecCCCCccChH
Q 004067 660 PDVFQCAVSGAPVTS-WDGYDT-----FYT--EKYM-GLPSEDP---VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR 727 (776)
Q Consensus 660 ~~~~~~~v~~~~~~~-~~~~~~-----~~~--~~~~-~~~~~~~---~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~ 727 (776)
|+ ++++++.+|... +..... .+. ..++ ..+.... ..+...++...+.++++|+|+++|+.|.++|+.
T Consensus 214 p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~ 292 (337)
T 1vlq_A 214 KK-AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPS 292 (337)
T ss_dssp SS-CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHH
T ss_pred CC-ccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCch
Confidence 85 788888888543 211100 000 0011 1111111 112344677778899999999999999999999
Q ss_pred HHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 728 HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 728 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
.+..+++++. .+++++++++++|.+. ..+..+.+.+||.++|
T Consensus 293 ~~~~~~~~l~---~~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l 334 (337)
T 1vlq_A 293 TVFAAYNYYA---GPKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLF 334 (337)
T ss_dssp HHHHHHHHCC---SSEEEEEETTCCTTTT----HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhcC---CCcEEEEcCCCCCCCc----chhhHHHHHHHHHHHH
Confidence 9999988873 3689999999999862 3456788889988764
No 45
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.88 E-value=9.6e-21 Score=199.23 Aligned_cols=311 Identities=12% Similarity=0.100 Sum_probs=197.1
Q ss_pred cccChHhhhcCCCCCCcCCCceeEcCCCCEEEEEeCCC----CcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHH
Q 004067 39 VLFSLEEIVQSPLPGYVAPTSIGFSPDDNLITYLLSPD----HSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEK 114 (776)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~ia~~~~~~----~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~ 114 (776)
+.+++++++..+.. .+++| ||++|+|+.... +....+||++++++++.+++.
T Consensus 4 ~~~~~~~l~~~~~~-----~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~----------------- 59 (347)
T 2gop_A 4 IEWNEKTFAKFAYL-----SDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFIE----------------- 59 (347)
T ss_dssp ------CCCCSCEE-----EEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEEE-----------------
T ss_pred ccCCcccceeeEEc-----ccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEcc-----------------
Confidence 45778888877666 88999 999999986421 223468999999999987772
Q ss_pred HHHHHHHHhcCCeeeEEEeecCCCceEEEEeCC------CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE
Q 004067 115 LRRERLRERGLGVTRYEWVKTSSKKKIIMVPLP------DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR 188 (776)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~~~------~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~ 188 (776)
.+..+.||| ||++|+|... .+||++|+++++.+ .++.... +..+.|||||+.|+|.+
T Consensus 60 -----------~~~~~~~Sp---Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~--~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 60 -----------NATMPRISP---DGKKIAFMRANEEKKVSEIWVADLETLSSK-KILEAKN--IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp -----------SCEEEEECT---TSSEEEEEEEETTTTEEEEEEEETTTTEEE-EEEEESE--EEEEEECTTSSEEEEEE
T ss_pred -----------cCCCeEECC---CCCEEEEEEeccCCCcceEEEEECCCCceE-EEEcCCC--ccceeECCCCCEEEEEE
Confidence 467889999 9999999732 23888888887776 5554432 56778888888888776
Q ss_pred CCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCC
Q 004067 189 DCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSE 268 (776)
Q Consensus 189 ~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (776)
... .+....+. +..+.|..||.....
T Consensus 123 ~~~-----~~~~~~~~-------------------------~~~~~~~~~g~~~~~------------------------ 148 (347)
T 2gop_A 123 FKR-----REDEDFIF-------------------------EDDVPAWFDDLGFFD------------------------ 148 (347)
T ss_dssp ECC-----CC----------------------------------CCCC--------------------------------
T ss_pred ccC-----CCcCCcEE-------------------------EcccceeecCccccc------------------------
Confidence 421 00000000 001113344432111
Q ss_pred CcceecCCCCCCCCCeEEEEEEEcCCCce-EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecC-----c-eEEE
Q 004067 269 AQEDHAYPFAGASNVKVRLGVVSAAGGPV-SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ-----T-KLKV 341 (776)
Q Consensus 269 ~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-----~-~~~l 341 (776)
....+|+++|+++++. +.+.. . .+..+.||||| +++..+... . ...|
T Consensus 149 -------------~~~~~l~~~d~~~~~~~~~l~~----------~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l 202 (347)
T 2gop_A 149 -------------GEKTTFWIFDTESEEVIEEFEK----------P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDI 202 (347)
T ss_dssp --------------CEEEEEEEETTTTEEEEEEEE----------E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEE
T ss_pred -------------CccceEEEEECCCCeEEeeecC----------C-CcccccCCCCe--EEEEEecccccccccccccE
Confidence 0126799999999987 66632 1 45678999999 555544432 2 5689
Q ss_pred EEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccC-----CceEEEEEeCCCceeeccccC-CeEE
Q 004067 342 LKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT-----GFRHLYLHDINGTCLGPITEG-DWMV 415 (776)
Q Consensus 342 ~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----g~~~l~~~~~~g~~~~~lt~~-~~~~ 415 (776)
|++| +++.+.++.+ .... .+ +.++..+++.+... ...+||+++ +++.++++.+ +..+
T Consensus 203 ~~~d--~~~~~~l~~~-~~~~-------~~-----spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~ 265 (347)
T 2gop_A 203 YIWE--DGKEEKMFEK-VSFY-------AV-----DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGV 265 (347)
T ss_dssp EEEE--TTEEEEEEEE-ESEE-------EE-----EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEE
T ss_pred EEeC--CCceEEeccC-ccee-------eE-----CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCccc
Confidence 9999 7788888765 2211 11 23455577777543 246899999 5666777765 4555
Q ss_pred EEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCCC-eEEEEEcCCcCEEEEEeeCCCCCCEEEE
Q 004067 416 EQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILL 494 (776)
Q Consensus 416 ~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~~~~i~~ 494 (776)
...+.|+ || +++.+..++ ..+|| ++ + | ...+++...+ +..++++| .++++.++...|++||.
T Consensus 266 ~~~~~~s-dg--~~~~~~~~~--~~~l~-~~-~--g-----~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 266 GQAKIKD-GK--VYFTLFEEG--SVNLY-IW-D--G-----EIKPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFT 328 (347)
T ss_dssp EEEEEET-TE--EEEEEEETT--EEEEE-EE-S--S-----SEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEE
T ss_pred CCccEEc-Cc--EEEEEecCC--cEEEE-Ec-C--C-----ceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheE
Confidence 5535588 77 777776665 37899 87 2 3 3455555443 56788998 48888888888889999
Q ss_pred EEcCCCceeEeecc
Q 004067 495 CSLQDGSLVLPLYE 508 (776)
Q Consensus 495 ~~~~~~~~~~~l~~ 508 (776)
++ |+ .++++.
T Consensus 329 ~~---g~-~~~lt~ 338 (347)
T 2gop_A 329 WD---GE-EKQLTD 338 (347)
T ss_dssp ES---SS-EEECCC
T ss_pred eC---Cc-EEEecc
Confidence 87 54 455664
No 46
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.88 E-value=4.3e-21 Score=185.68 Aligned_cols=203 Identities=21% Similarity=0.254 Sum_probs=154.7
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
..+.+.+++.+| +++++++.|... ++.|+||++||++....... ...+..++..|+++||.|+++|+||+|.+
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~~----~~~~~vv~~HG~~~~~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 77 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKGI----EKSVTGIICHPHPLHGGTMN--NKVVTTLAKALDELGLKTVRFNFRGVGKS 77 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSSC----CCSEEEEEECSCGGGTCCTT--CHHHHHHHHHHHHTTCEEEEECCTTSTTC
T ss_pred ccceEEEECCCc-eEEEEEEcCCCC----CCCCEEEEEcCCCCCCCccC--CchHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 477889999999 999999999753 46799999999542211111 11234567889999999999999999988
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccc
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 682 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~ 682 (776)
...+. ......+|+.++++++.++. +.++++++||||||.+++.++ .+| .++++++.+|..+..
T Consensus 78 ~~~~~------~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~------ 141 (208)
T 3trd_A 78 QGRYD------NGVGEVEDLKAVLRWVEHHW--SQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE------ 141 (208)
T ss_dssp CSCCC------TTTHHHHHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG------
T ss_pred CCCcc------chHHHHHHHHHHHHHHHHhC--CCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC------
Confidence 65421 11234789999999998873 457999999999999999999 667 789999888775210
Q ss_pred cccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHH
Q 004067 683 TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRI 762 (776)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~ 762 (776)
....+..++.|+|+++|++|..+++..+.++++.+ ..+++++++++++|.+.. ...
T Consensus 142 -------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~--~~~ 197 (208)
T 3trd_A 142 -------------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQI---SSPVEFVVMSGASHFFHG--RLI 197 (208)
T ss_dssp -------------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHS---SSCCEEEEETTCCSSCTT--CHH
T ss_pred -------------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHc---cCceEEEEeCCCCCcccc--cHH
Confidence 01223445789999999999999999988888776 334899999999998743 347
Q ss_pred HHHHHHHHHH
Q 004067 763 YMEERIWEFI 772 (776)
Q Consensus 763 ~~~~~~~~fl 772 (776)
++.+.+.+||
T Consensus 198 ~~~~~i~~fl 207 (208)
T 3trd_A 198 ELRELLVRNL 207 (208)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7788888886
No 47
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.87 E-value=3.5e-21 Score=202.60 Aligned_cols=238 Identities=15% Similarity=0.123 Sum_probs=164.2
Q ss_pred CCCCceEEEEEcCCCcEEEEEEEc-CCCC-------------------CCCCCCceEEEEEcCCCCcccccccccccchh
Q 004067 520 QLEPPDIVQIQANDGTVLYGALYK-PDES-------------------RYGPPPYKTLISVYGGPCVQLVCDSWINTVDM 579 (776)
Q Consensus 520 ~~~~~~~~~~~~~dg~~l~~~~~~-P~~~-------------------~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~ 579 (776)
.....+.+.+...+| +.+.+|. |... ....++.|+||++|||+...... .+ ..+..
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~-~~-~~~~~ 135 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSA-SS-TIYDS 135 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCT-TB-HHHHH
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCC-ch-hhHHH
Confidence 345678888988787 7888887 8652 01225789999999986532211 11 11344
Q ss_pred hhHHHHhC-CcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC----CCCCC-cEEEEeechHHHHHH
Q 004067 580 RAQYLRSK-GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG----LAKVG-HIGLYGWSYGGYLSA 653 (776)
Q Consensus 580 ~~~~l~~~-G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~id~~-~i~l~G~S~GG~~a~ 653 (776)
++..|+.. ||+|+++|||+.++... ...++|+.++++|+.++. .+|.+ +|+|+|+||||++|+
T Consensus 136 ~~~~la~~~g~~Vv~~dyR~~p~~~~-----------~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~ 204 (365)
T 3ebl_A 136 LCRRFVKLSKGVVVSVNYRRAPEHRY-----------PCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAH 204 (365)
T ss_dssp HHHHHHHHHTSEEEEECCCCTTTSCT-----------THHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHCCCEEEEeeCCCCCCCCC-----------cHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHH
Confidence 56777765 99999999997654321 123789999999999764 57888 999999999999999
Q ss_pred HHHhhCCC---ceEEEEEcCCCCCccccccc-----------------ccccccCCCCCCccchhcCChhh-hhccCC--
Q 004067 654 ITLARFPD---VFQCAVSGAPVTSWDGYDTF-----------------YTEKYMGLPSEDPVGYEYSSVMH-HVHKMK-- 710 (776)
Q Consensus 654 ~~a~~~~~---~~~~~v~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~-- 710 (776)
.++.+.++ .++++|+.+|+.+....... +...++..... ......+++. ....++
T Consensus 205 ~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~l~~~ 282 (365)
T 3ebl_A 205 HVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDAD--RDHPACNPFGPNGRRLGGL 282 (365)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCC--TTSTTTCTTSTTCCCCTTS
T ss_pred HHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCC--CCCcccCCCCCcchhhccC
Confidence 99987554 78999999998875321110 00111111100 0011112221 223343
Q ss_pred --CcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCC---CCCcHHHHHHHHHHHHHHhC
Q 004067 711 --GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR---RHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 711 --~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~~~~fl~~~l 776 (776)
.|+|++||+.|..+ ..+.+++++|++.++++++++|++++|.+. ..+...++++.+.+||++++
T Consensus 283 ~~pP~Li~~G~~D~l~--~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~ 351 (365)
T 3ebl_A 283 PFAKSLIIVSGLDLTC--DRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANL 351 (365)
T ss_dssp CCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCcccch--hHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhh
Confidence 59999999999665 456899999999999999999999999874 34567789999999999875
No 48
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.87 E-value=2.5e-21 Score=201.42 Aligned_cols=229 Identities=15% Similarity=0.162 Sum_probs=163.5
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTAR 601 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~g~ 601 (776)
..+.+++++.+| .+.+++|.|... +.|+||++||++....... .+...+..|+. .||.|+++|||+.++
T Consensus 62 ~~~~~~~~~~~g-~i~~~~~~p~~~-----~~p~vv~~HGgg~~~g~~~----~~~~~~~~la~~~g~~V~~~dyr~~p~ 131 (326)
T 3ga7_A 62 TTRTCAVPTPYG-DVTTRLYSPQPT-----SQATLYYLHGGGFILGNLD----THDRIMRLLARYTGCTVIGIDYSLSPQ 131 (326)
T ss_dssp EEEEEEECCTTS-CEEEEEEESSSS-----CSCEEEEECCSTTTSCCTT----TTHHHHHHHHHHHCSEEEEECCCCTTT
T ss_pred ceEEEEeecCCC-CeEEEEEeCCCC-----CCcEEEEECCCCcccCChh----hhHHHHHHHHHHcCCEEEEeeCCCCCC
Confidence 347889998888 799999999763 3399999999873322111 23445777777 899999999998765
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcC---CCCCCcEEEEeechHHHHHHHHHhhCCCc------eEEEEEcCCC
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFPDV------FQCAVSGAPV 672 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~~~~------~~~~v~~~~~ 672 (776)
... ...++|+.++++++.++. .+|.++|+|+|+|+||.+|+.++.++++. ++++++.+|+
T Consensus 132 ~~~-----------~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~ 200 (326)
T 3ga7_A 132 ARY-----------PQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGL 200 (326)
T ss_dssp SCT-----------THHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCC
T ss_pred CCC-----------CcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccc
Confidence 431 123689999999999863 57889999999999999999999877654 8999999988
Q ss_pred CCcccccc--c---------------ccccccCCCCCCccchhcCChh-hhhccCCCcEEEEecCCCCccChHHHHHHHH
Q 004067 673 TSWDGYDT--F---------------YTEKYMGLPSEDPVGYEYSSVM-HHVHKMKGKLLLVHGMIDENVHFRHTARLIN 734 (776)
Q Consensus 673 ~~~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~ 734 (776)
.+...... . +...++......... ..++. ..+.+..+|+|++||+.|.++ .++..+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~ 276 (326)
T 3ga7_A 201 YGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESP--WYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLLHQ 276 (326)
T ss_dssp CSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCT--TTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHHHH
T ss_pred cccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCc--ccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHHHH
Confidence 65432100 0 001111110000000 00111 122334569999999999988 47889999
Q ss_pred HHHHCCCCeEEEEecCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 004067 735 ALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 735 ~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l 776 (776)
++++.+.++++++|++++|.+.. .+...++++.+.+||+++|
T Consensus 277 ~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l 322 (326)
T 3ga7_A 277 TLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARM 322 (326)
T ss_dssp HHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999843 2345789999999999874
No 49
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.87 E-value=1.3e-21 Score=205.65 Aligned_cols=233 Identities=20% Similarity=0.215 Sum_probs=168.5
Q ss_pred CCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 522 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 522 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
...+.+.+...+|..++++++.|++. ++.|+||++||+++... .| .... .+++.||.|+++|+||+|.
T Consensus 80 ~~~~~~~~~~~~g~~l~~~~~~P~~~----~~~p~vv~~HG~g~~~~---~~----~~~~-~~~~~G~~v~~~D~rG~g~ 147 (346)
T 3fcy_A 80 AECYDLYFTGVRGARIHAKYIKPKTE----GKHPALIRFHGYSSNSG---DW----NDKL-NYVAAGFTVVAMDVRGQGG 147 (346)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEESCS----SCEEEEEEECCTTCCSC---CS----GGGH-HHHTTTCEEEEECCTTSSS
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCCC----CCcCEEEEECCCCCCCC---Ch----hhhh-HHHhCCcEEEEEcCCCCCC
Confidence 35678899988999999999999863 57899999999876643 23 2223 5678999999999999998
Q ss_pred Cchhhhhhh---------------hhc-cCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEE
Q 004067 602 RGLKFEASI---------------KHN-CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 665 (776)
Q Consensus 602 ~~~~~~~~~---------------~~~-~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~ 665 (776)
+........ ... .....+.|+.++++++..+..+|.++|+++|||+||.+++.++..+|+ +++
T Consensus 148 s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~ 226 (346)
T 3fcy_A 148 QSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRK 226 (346)
T ss_dssp SCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCE
T ss_pred CCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccE
Confidence 764421100 000 000125899999999998887888999999999999999999999998 899
Q ss_pred EEEcCCCCCc-ccc------ccccc--ccccC--CC--CCC---ccchhcCChhhhhccCCCcEEEEecCCCCccChHHH
Q 004067 666 AVSGAPVTSW-DGY------DTFYT--EKYMG--LP--SED---PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 729 (776)
Q Consensus 666 ~v~~~~~~~~-~~~------~~~~~--~~~~~--~~--~~~---~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~ 729 (776)
+++.+|.... ... ...+. ..++. .+ ... ...+...++...+.++++|+|+++|+.|.++++..+
T Consensus 227 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~ 306 (346)
T 3fcy_A 227 VVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTV 306 (346)
T ss_dssp EEEESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHH
T ss_pred EEECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHH
Confidence 9999886531 110 00000 00000 01 000 012233455667888999999999999999999988
Q ss_pred HHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 730 ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 730 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
..+++++ ..+++++++++++|.+. .++.+.+.+||++.
T Consensus 307 ~~~~~~~---~~~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 307 FAAYNNI---QSKKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp HHHHTTC---CSSEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred HHHHHhc---CCCcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 8888776 23789999999999874 45678899999763
No 50
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.87 E-value=9.7e-21 Score=184.95 Aligned_cols=209 Identities=22% Similarity=0.247 Sum_probs=159.9
Q ss_pred CCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 522 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 522 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
...+.+.+++.+| .+.++++.|++. ++++.|+||++||++........ ..+..++..|+++||.|+++|+||+|.
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~--~~~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~ 82 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPD--VAVQPVTAIVCHPLSTEGGSMHN--KVVTMAARALRELGITVVRFNFRSVGT 82 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTT--SCCCSEEEEEECSCTTTTCSTTC--HHHHHHHHHHHTTTCEEEEECCTTSTT
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCC--CccccCEEEEECCCCCcCCcccc--hHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4578899999888 899999999763 11357999999996432111111 123456788999999999999999998
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 681 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~ 681 (776)
+...+. ......+|+.++++++.++. +.++++++|||+||.+++.++.++ .++++++.+|......
T Consensus 83 s~~~~~------~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~---- 148 (220)
T 2fuk_A 83 SAGSFD------HGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD---- 148 (220)
T ss_dssp CCSCCC------TTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC----
T ss_pred CCCCcc------cCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh----
Confidence 765431 12234789999999998875 567999999999999999999987 7899999888754321
Q ss_pred ccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcH
Q 004067 682 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 761 (776)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 761 (776)
+ ..+. ...|+|+++|++|..+++..+.++++.+ ..+++++++++++|.+.. ..
T Consensus 149 ---------------~------~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~--~~ 201 (220)
T 2fuk_A 149 ---------------F------SDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETL---EQQPTLVRMPDTSHFFHR--KL 201 (220)
T ss_dssp ---------------C------TTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTC---SSCCEEEEETTCCTTCTT--CH
T ss_pred ---------------h------hhcc-cCCcEEEEECCCCcccCHHHHHHHHHHh---CcCCcEEEeCCCCceehh--hH
Confidence 0 0011 1468999999999999999888888776 256899999999998744 46
Q ss_pred HHHHHHHHHHHHHhC
Q 004067 762 IYMEERIWEFIERTL 776 (776)
Q Consensus 762 ~~~~~~~~~fl~~~l 776 (776)
.++.+.+.+||.++|
T Consensus 202 ~~~~~~i~~~l~~~l 216 (220)
T 2fuk_A 202 IDLRGALQHGVRRWL 216 (220)
T ss_dssp HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHh
Confidence 788999999998875
No 51
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.87 E-value=2.6e-21 Score=200.51 Aligned_cols=216 Identities=18% Similarity=0.133 Sum_probs=153.9
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCCCCCchhhhhhhhhcc
Q 004067 536 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 614 (776)
Q Consensus 536 ~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~g~~~~~~~~~~~~~~ 614 (776)
.+.+++|.|+.. ++.|+||++|||+....... .+..++..++. .||.|+++|||+.++...
T Consensus 66 ~i~~~~~~p~~~----~~~p~vv~~HGGg~~~g~~~----~~~~~~~~la~~~g~~vv~~dyr~~p~~~~---------- 127 (322)
T 3fak_A 66 GCAAEWVRAPGC----QAGKAILYLHGGGYVMGSIN----THRSMVGEISRASQAAALLLDYRLAPEHPF---------- 127 (322)
T ss_dssp TEEEEEEECTTC----CTTCEEEEECCSTTTSCCHH----HHHHHHHHHHHHHTSEEEEECCCCTTTSCT----------
T ss_pred CeEEEEEeCCCC----CCccEEEEEcCCccccCChH----HHHHHHHHHHHhcCCEEEEEeCCCCCCCCC----------
Confidence 489999999763 46799999999764322111 22334555654 699999999998764431
Q ss_pred CCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCc----eEEEEEcCCCCCcccccccccc------
Q 004067 615 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTSWDGYDTFYTE------ 684 (776)
Q Consensus 615 ~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~----~~~~v~~~~~~~~~~~~~~~~~------ 684 (776)
...++|+.++++++.++ .+|.++|+|+|+|+||++|+.++.+.++. ++++++.+|+.++......+..
T Consensus 128 -~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~ 205 (322)
T 3fak_A 128 -PAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADP 205 (322)
T ss_dssp -THHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTTTCC
T ss_pred -CcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCccCc
Confidence 12368999999999988 67899999999999999999999876553 8999999999876432211111
Q ss_pred ------------cccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCC
Q 004067 685 ------------KYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDER 752 (776)
Q Consensus 685 ------------~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 752 (776)
.+.+.... .....+++...-....|+||++|+.|.++ .++..+++++++.++++++++||+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~---~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~ 280 (322)
T 3fak_A 206 MVAPGGINKMAARYLNGADA---KHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDDMI 280 (322)
T ss_dssp SCCSSHHHHHHHHHHTTSCT---TCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred ccCHHHHHHHHHHhcCCCCC---CCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 11111100 01112333221122259999999999874 57889999999999999999999999
Q ss_pred CCCCC----CCcHHHHHHHHHHHHHHhC
Q 004067 753 HMPRR----HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 753 H~~~~----~~~~~~~~~~~~~fl~~~l 776 (776)
|.+.. .+...++++.+.+||+++|
T Consensus 281 H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3fak_A 281 HVWHAFHPMLPEGKQAIVRVGEFMREQW 308 (322)
T ss_dssp TTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred eehhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 98732 3446888999999999864
No 52
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.86 E-value=6.3e-21 Score=197.87 Aligned_cols=233 Identities=18% Similarity=0.149 Sum_probs=165.2
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCc-ccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCV-QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~-~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
..+.+.+++.+|..+.++++.|++. ++.|+||++||++++ .. . +.. ...+++.||.|+++|+||+|.
T Consensus 55 ~~~~~~~~~~~g~~i~~~~~~P~~~----~~~p~vv~~HG~~~~~~~---~----~~~-~~~l~~~g~~v~~~d~rg~g~ 122 (318)
T 1l7a_A 55 KVYRLTYKSFGNARITGWYAVPDKE----GPHPAIVKYHGYNASYDG---E----IHE-MVNWALHGYATFGMLVRGQQR 122 (318)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEESSC----SCEEEEEEECCTTCCSGG---G----HHH-HHHHHHTTCEEEEECCTTTSS
T ss_pred EEEEEEEEccCCCEEEEEEEeeCCC----CCccEEEEEcCCCCCCCC---C----ccc-ccchhhCCcEEEEecCCCCCC
Confidence 4677888888899999999999762 578999999998765 33 1 222 336788899999999999998
Q ss_pred Cchhhhhhh-----hhccC---------CccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEE
Q 004067 602 RGLKFEASI-----KHNCG---------RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV 667 (776)
Q Consensus 602 ~~~~~~~~~-----~~~~~---------~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v 667 (776)
+...+.... ....+ .....|+.++++++.++..+|.++|+++|||+||.+++.++..+|+ +.+++
T Consensus 123 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v 201 (318)
T 1l7a_A 123 SEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAV 201 (318)
T ss_dssp SCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEE
T ss_pred CCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEE
Confidence 865421100 00000 1237899999999999877888999999999999999999999887 56666
Q ss_pred EcCCCCC-ccccccc-----cc--cccc---CCCCCC---ccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHH
Q 004067 668 SGAPVTS-WDGYDTF-----YT--EKYM---GLPSED---PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLI 733 (776)
Q Consensus 668 ~~~~~~~-~~~~~~~-----~~--~~~~---~~~~~~---~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~ 733 (776)
+.+|... +...... +. ..++ ..+... .......++...+.++++|+|+++|+.|..+++..+..++
T Consensus 202 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~ 281 (318)
T 1l7a_A 202 ADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAY 281 (318)
T ss_dssp EESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred ecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHH
Confidence 6777533 2111000 00 0000 000000 0111223456677888999999999999999999998888
Q ss_pred HHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 734 NALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 734 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+.+. .+++++++++++|.. ..+..+.+.+||.++|
T Consensus 282 ~~l~---~~~~~~~~~~~~H~~-----~~~~~~~~~~fl~~~l 316 (318)
T 1l7a_A 282 NHLE---TKKELKVYRYFGHEY-----IPAFQTEKLAFFKQIL 316 (318)
T ss_dssp HHCC---SSEEEEEETTCCSSC-----CHHHHHHHHHHHHHHH
T ss_pred hhcC---CCeeEEEccCCCCCC-----cchhHHHHHHHHHHHh
Confidence 8773 358999999999983 3466889999998864
No 53
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.3e-20 Score=213.23 Aligned_cols=270 Identities=11% Similarity=0.036 Sum_probs=185.8
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
..++|||||++|||.+..++ ++.+|++++++.++++.+.. ..+..+.|||
T Consensus 25 ~~~~~~~DG~~la~~s~~~g----~~~lw~~~~g~~~~lt~~~~-----------------------~~~~~~~~sp--- 74 (582)
T 3o4h_A 25 YSLQGVVDGDKLLVVGFSEG----SVNAYLYDGGETVKLNREPI-----------------------NSVLDPHYGV--- 74 (582)
T ss_dssp EEEEEEETTTEEEEEEEETT----EEEEEEEETTEEEECCSSCC-----------------------SEECEECTTC---
T ss_pred heeecCCCCCeEEEEEccCC----ceeEEEEcCCCcEeeecccc-----------------------cccccccCCC---
Confidence 68899999999999987543 34455568999999986432 3577899999
Q ss_pred CceEEEEeCC-----C--cEEEEeC--CCCccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEe
Q 004067 138 KKKIIMVPLP-----D--GIYFQDL--SCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLT 206 (776)
Q Consensus 138 dg~~l~~~~~-----~--~l~~~d~--~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt 206 (776)
| + ++|..+ . .||.+++ .++.. .++.... .....|||||+.++|++. +.+.+|++++|+.++++
T Consensus 75 d-~-~l~~~~~~~g~~~~~l~~~~~~~~g~~~--~l~~~~~--~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~ 148 (582)
T 3o4h_A 75 G-R-VILVRDVSKGAEQHALFKVNTSRPGEEQ--RLEAVKP--MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA 148 (582)
T ss_dssp S-E-EEEEEECSTTSCCEEEEEEETTSTTCCE--ECTTSCS--BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE
T ss_pred C-e-EEEEeccCCCCcceEEEEEeccCCCccc--cccCCCC--ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee
Confidence 9 4 555422 2 5888888 55544 4554443 446799999999888864 46778999999998887
Q ss_pred eCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEE
Q 004067 207 HGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVR 286 (776)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 286 (776)
..+. ..++|||||+.|++.+.+.+. ...
T Consensus 149 ~~~~--------------------~~~~~spDG~~la~~~~~~~~--------------------------------~~~ 176 (582)
T 3o4h_A 149 RLPG--------------------FGFVSDIRGDLIAGLGFFGGG--------------------------------RVS 176 (582)
T ss_dssp EESS--------------------CEEEEEEETTEEEEEEEEETT--------------------------------EEE
T ss_pred cCCC--------------------ceEEECCCCCEEEEEEEcCCC--------------------------------CeE
Confidence 6442 267899999999988754321 145
Q ss_pred EEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecc
Q 004067 287 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 366 (776)
Q Consensus 287 l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 366 (776)
|++||+++++.+++ ..+...+..++|||||+.|+ .+.+. +...|++||+++|+.+ ++..... . ...
T Consensus 177 i~~~d~~~g~~~~l---------~~~~~~~~~~~~SpDG~~l~-~~~~~-~~~~i~~~d~~~~~~~-~~~~~~~-~-~~~ 242 (582)
T 3o4h_A 177 LFTSNLSSGGLRVF---------DSGEGSFSSASISPGMKVTA-GLETA-REARLVTVDPRDGSVE-DLELPSK-D-FSS 242 (582)
T ss_dssp EEEEETTTCCCEEE---------CCSSCEEEEEEECTTSCEEE-EEECS-SCEEEEEECTTTCCEE-ECCCSCS-H-HHH
T ss_pred EEEEcCCCCCceEe---------ecCCCccccceECCCCCEEE-EccCC-CeeEEEEEcCCCCcEE-EccCCCc-C-hhh
Confidence 99999999998877 45566789999999999888 43333 4568999999999988 4433211 1 011
Q ss_pred cc--------cccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCc
Q 004067 367 DC--------FTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL 438 (776)
Q Consensus 367 ~~--------~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~ 438 (776)
.. |+| ++ .+++++..+|. +.+|+. | +..+... ..+..+ .|+ ||+.++..+....+
T Consensus 243 ~~~~~~~~~~~sp-------dg-~~~~~~~~~g~--~~l~~~-g-~~~~~~~--~~v~~~-~~s-dg~~l~~~s~~~~p- 305 (582)
T 3o4h_A 243 YRPTAITWLGYLP-------DG-RLAVVARREGR--SAVFID-G-ERVEAPQ--GNHGRV-VLW-RGKLVTSHTSLSTP- 305 (582)
T ss_dssp HCCSEEEEEEECT-------TS-CEEEEEEETTE--EEEEET-T-EEECCCS--SEEEEE-EEE-TTEEEEEEEETTEE-
T ss_pred hhhccccceeEcC-------CC-cEEEEEEcCCc--EEEEEE-C-CeeccCC--CceEEE-Eec-CCEEEEEEcCCCCC-
Confidence 11 322 23 68888888884 444555 4 4333221 234444 488 88877665655544
Q ss_pred eeeEEEEEe
Q 004067 439 ESHLYCAKL 447 (776)
Q Consensus 439 ~~~l~~~~~ 447 (776)
..+|.+++
T Consensus 306 -~~l~~~d~ 313 (582)
T 3o4h_A 306 -PRIVSLPS 313 (582)
T ss_dssp -EEEEEETT
T ss_pred -CeEEEEcC
Confidence 67888876
No 54
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.86 E-value=6.3e-21 Score=202.37 Aligned_cols=237 Identities=19% Similarity=0.211 Sum_probs=166.7
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
..+.+.+.+.||..+.++++.|.+. ..++.|+||++||+++... .|. ..++..|+++||.|+++|+||+|.+
T Consensus 67 ~~~~~~~~~~~g~~~~~~~~~p~~~--~~~~~p~vv~~hG~~~~~~---~~~---~~~~~~l~~~G~~v~~~d~~g~g~s 138 (367)
T 2hdw_A 67 EHRKVTFANRYGITLAADLYLPKNR--GGDRLPAIVIGGPFGAVKE---QSS---GLYAQTMAERGFVTLAFDPSYTGES 138 (367)
T ss_dssp EEEEEEEECTTSCEEEEEEEEESSC--CSSCEEEEEEECCTTCCTT---SHH---HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred eeEEEEEecCCCCEEEEEEEeCCCC--CCCCCCEEEEECCCCCcch---hhH---HHHHHHHHHCCCEEEEECCCCcCCC
Confidence 5678889988899999999999762 1257899999999766533 221 1257888999999999999999977
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc-
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF- 681 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~- 681 (776)
....... ........|+.++++++.++..++.++++++|||+||.+++.++.++|+ ++++|+.+|......+...
T Consensus 139 ~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~~~v~~~p~~~~~~~~~~~ 214 (367)
T 2hdw_A 139 GGQPRNV---ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKR-VKAVVTSTMYDMTRVMSKGY 214 (367)
T ss_dssp CCSSSSC---CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCCHHHHHHHTT
T ss_pred CCcCccc---cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCCC-ccEEEEeccccccHHHhhhh
Confidence 5322110 0011247899999999999887788999999999999999999999885 7899988876311000000
Q ss_pred ----------------------------c------c--------------cccc---C-CCC----------CCccchhc
Q 004067 682 ----------------------------Y------T--------------EKYM---G-LPS----------EDPVGYEY 699 (776)
Q Consensus 682 ----------------------------~------~--------------~~~~---~-~~~----------~~~~~~~~ 699 (776)
+ . +.+. + .+. .....+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (367)
T 2hdw_A 215 NDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN 294 (367)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT
T ss_pred ccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcC
Confidence 0 0 0000 0 000 00112233
Q ss_pred CChhhhhccCC-CcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 700 SSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 700 ~~~~~~~~~i~-~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
.++...+.+++ +|+|+++|++|. ++..+.++++. .+.+++++++++++|.+........+.+.+.+||+++|
T Consensus 295 ~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 295 MPILTYIKEISPRPILLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp SCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred CChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 45566788888 999999999998 77777777665 57889999999999974221111126799999999886
No 55
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.86 E-value=1.2e-21 Score=199.57 Aligned_cols=241 Identities=15% Similarity=0.105 Sum_probs=160.3
Q ss_pred ceEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECC--CCCC
Q 004067 524 PDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--RGTA 600 (776)
Q Consensus 524 ~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--rg~g 600 (776)
.+.+.+.+ ..|..+.+.+|.|+... ++++|+||++||+++... .|.. ....++.++++||+|+++|+ ||+|
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~~--~~~~p~vv~lHG~~~~~~---~~~~-~~~~~~~~~~~g~~vv~~d~~~rG~~ 89 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKAE--TGKCPALYWLSGLTCTEQ---NFIS-KSGYHQSASEHGLVVIAPDTSPRGCN 89 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG--TSCEEEEEEECCTTCCSH---HHHH-HSCCHHHHHHHTCEEEEECSCSSCCC
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCCC--CCCCCEEEEEcCCCCCcc---chhh-cchHHHHhhcCCeEEEEeccccCccc
Confidence 34455554 46888999999998731 258999999999876543 2211 11225778899999999999 8777
Q ss_pred CCchhhhh------hhhhccCC-------ccHHHHH-HHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEE
Q 004067 601 RRGLKFEA------SIKHNCGR-------IDAEDQL-TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 666 (776)
Q Consensus 601 ~~~~~~~~------~~~~~~~~-------~~~~D~~-~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~ 666 (776)
.++..... ..+..... ....++. ..++++.++..+|.++|+|+||||||++|+.++.++|++|+++
T Consensus 90 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 169 (282)
T 3fcx_A 90 IKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSV 169 (282)
T ss_dssp C--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCE
T ss_pred cccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEE
Confidence 64432000 00000000 1122233 4445555455578899999999999999999999999999999
Q ss_pred EEcCCCCCcccccc--cccccccCCCCCCccchhcCChhhhhccC---CCcEEEEecCCCCccChHH--HHHHHHHHHHC
Q 004067 667 VSGAPVTSWDGYDT--FYTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVHFRH--TARLINALVAA 739 (776)
Q Consensus 667 v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~P~lii~G~~D~~v~~~~--~~~~~~~l~~~ 739 (776)
++.+|+.+...... .....+++.. ...+...++...+.++ +.|+|++||+.|.+++... +.++.+++++.
T Consensus 170 v~~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 246 (282)
T 3fcx_A 170 SAFAPICNPVLCPWGKKAFSGYLGTD---QSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEK 246 (282)
T ss_dssp EEESCCCCGGGSHHHHHHHHHHHC------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHHHT
T ss_pred EEeCCccCcccCchhHHHHHHhcCCc---hhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHHHc
Confidence 99999876432110 0011122221 2334455555555444 7899999999999986654 56899999999
Q ss_pred CCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 740 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 740 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+.+++++++|+++|.+. ....+....++|+.++|
T Consensus 247 g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l 280 (282)
T 3fcx_A 247 KIPVVFRLQEDYDHSYY---FIATFITDHIRHHAKYL 280 (282)
T ss_dssp TCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHT
T ss_pred CCceEEEECCCCCcCHH---HHHhhhHHHHHHHHHhh
Confidence 99999999999999863 24556677788888775
No 56
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.86 E-value=4.6e-21 Score=215.25 Aligned_cols=244 Identities=15% Similarity=0.233 Sum_probs=175.4
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccc-cch-hhh---HHHHhCCcEEEEECCCC
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN-TVD-MRA---QYLRSKGILVWKLDNRG 598 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~-~~~-~~~---~~l~~~G~~v~~~d~rg 598 (776)
.+.+.++..||..|+++++.|++. +++|+||++||..... ....+.. .+. .++ +.|+++||+|+.+|+||
T Consensus 25 ~~~v~i~~~DG~~L~~~~~~P~~~----~~~P~vl~~hgyg~~~-~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG 99 (615)
T 1mpx_A 25 KREVMIPMRDGVKLHTVIVLPKGA----KNAPIVLTRTPYDASG-RTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRG 99 (615)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHH-HTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTT
T ss_pred EEEEEEECCCCCEEEEEEEeCCCC----CCeeEEEEEcCCCCcc-ccccccccccccccchhHHHHHhCCeEEEEECCCC
Confidence 467889999999999999999763 5789999999865432 0000110 110 112 78999999999999999
Q ss_pred CCCCchhhhhhh-----hhccCCccHHHHHHHHHHHHHc-CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCC
Q 004067 599 TARRGLKFEASI-----KHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 672 (776)
Q Consensus 599 ~g~~~~~~~~~~-----~~~~~~~~~~D~~~~i~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~ 672 (776)
+|+|+..+.... +..++..+.+|+.++++++.++ ++.+ .+|+++|+||||++++.+++.+++.++|+|+.+|+
T Consensus 100 ~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~ 178 (615)
T 1mpx_A 100 KYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPM 178 (615)
T ss_dssp STTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCC
T ss_pred CCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCc
Confidence 999876653321 0112226789999999999998 6665 59999999999999999999889999999999999
Q ss_pred CC-cc-c-c-c-ccc----cccc------------------------------------------------cCCCCCCcc
Q 004067 673 TS-WD-G-Y-D-TFY----TEKY------------------------------------------------MGLPSEDPV 695 (776)
Q Consensus 673 ~~-~~-~-~-~-~~~----~~~~------------------------------------------------~~~~~~~~~ 695 (776)
.+ +. . + . ..+ ..++ +..+ ...+
T Consensus 179 ~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~d~ 257 (615)
T 1mpx_A 179 IDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHA-AYDA 257 (615)
T ss_dssp CCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTC-SSCH
T ss_pred cccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCC-CcCh
Confidence 88 43 1 1 0 000 0000 0000 1123
Q ss_pred chhcCChhhhhcc--CCCcEEEEecCCCCccChHHHHHHHHHHHHCCC---CeEEEEecCCCCCC-CC----C-------
Q 004067 696 GYEYSSVMHHVHK--MKGKLLLVHGMIDENVHFRHTARLINALVAARK---PYEILIFPDERHMP-RR----H------- 758 (776)
Q Consensus 696 ~~~~~~~~~~~~~--i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~---~~~~~~~~~~~H~~-~~----~------- 758 (776)
.|...++..++.+ |++|+|++||..|.. +..++.+++++|++++. ..++++.|. +|.. .. .
T Consensus 258 ~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~ 335 (615)
T 1mpx_A 258 FWQEQALDKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALNFEG 335 (615)
T ss_dssp HHHTTCHHHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEECSS
T ss_pred hhhhcChhhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCccccCc
Confidence 4566788888999 999999999999997 77889999999998864 388888887 6864 10 0
Q ss_pred C-cHHHHHHHHHHHHHHhC
Q 004067 759 R-DRIYMEERIWEFIERTL 776 (776)
Q Consensus 759 ~-~~~~~~~~~~~fl~~~l 776 (776)
. ......+.+.+||++||
T Consensus 336 ~~~~~~~~~~~~~wfd~~L 354 (615)
T 1mpx_A 336 DTARQFRHDVLRPFFDQYL 354 (615)
T ss_dssp CHHHHHHHHTHHHHHHHHH
T ss_pred ccchhhhhhHHHHHHHHHh
Confidence 1 11223678899999886
No 57
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.86 E-value=8.6e-21 Score=197.19 Aligned_cols=233 Identities=16% Similarity=0.077 Sum_probs=163.7
Q ss_pred CceEEEEEcCCCc-EEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCCC
Q 004067 523 PPDIVQIQANDGT-VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTA 600 (776)
Q Consensus 523 ~~~~~~~~~~dg~-~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~g 600 (776)
..+.+.+...+|. .+.+++|.|+... ++.|+||++||++....... .+...+..|++ .||.|+++|+||+|
T Consensus 50 ~~~~~~i~~~~g~~~l~~~~~~P~~~~---~~~p~vv~~HGgg~~~g~~~----~~~~~~~~la~~~G~~Vv~~d~rg~~ 122 (323)
T 1lzl_A 50 SLRELSAPGLDGDPEVKIRFVTPDNTA---GPVPVLLWIHGGGFAIGTAE----SSDPFCVEVARELGFAVANVEYRLAP 122 (323)
T ss_dssp EEEEEEECCSTTCCCEEEEEEEESSCC---SCEEEEEEECCSTTTSCCGG----GGHHHHHHHHHHHCCEEEEECCCCTT
T ss_pred eEEEEEecCCCCCceeEEEEEecCCCC---CCCcEEEEECCCccccCChh----hhHHHHHHHHHhcCcEEEEecCCCCC
Confidence 4677888887886 7999999997531 57899999999863211111 23344666776 59999999999998
Q ss_pred CCchhhhhhhhhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhCCC----ceEEEEEcCCCC
Q 004067 601 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVT 673 (776)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~~~----~~~~~v~~~~~~ 673 (776)
.+... ....|+.++++++.+. ..+|.++|+|+||||||.+++.++.++++ .++++++.+|..
T Consensus 123 ~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 191 (323)
T 1lzl_A 123 ETTFP-----------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPEL 191 (323)
T ss_dssp TSCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCC
T ss_pred CCCCC-----------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCcc
Confidence 76421 1267888899998874 34677899999999999999999987655 489999999987
Q ss_pred Cccccccc-----------------ccccccCCCCCC---ccchhcCChhhhhccCC--CcEEEEecCCCCccChHHHHH
Q 004067 674 SWDGYDTF-----------------YTEKYMGLPSED---PVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTAR 731 (776)
Q Consensus 674 ~~~~~~~~-----------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~v~~~~~~~ 731 (776)
+....... +...+++..... .......++... ..+. +|+|+++|+.|..+ .++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~~~--~~~~~ 268 (323)
T 1lzl_A 192 DDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDPLR--DEGIE 268 (323)
T ss_dssp CTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCTTH--HHHHH
T ss_pred CCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCCch--HHHHH
Confidence 65421100 001111211100 011111223221 1232 69999999999987 47789
Q ss_pred HHHHHHHCCCCeEEEEecCCCCCCCCC---CcHHHHHHHHHHHHHHhC
Q 004067 732 LINALVAARKPYEILIFPDERHMPRRH---RDRIYMEERIWEFIERTL 776 (776)
Q Consensus 732 ~~~~l~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~~fl~~~l 776 (776)
+++++++.+.+++++++++++|.+... +...++.+.+.+||++++
T Consensus 269 ~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l 316 (323)
T 1lzl_A 269 YALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGL 316 (323)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999986322 236788999999999875
No 58
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.86 E-value=2.4e-21 Score=202.89 Aligned_cols=237 Identities=12% Similarity=0.094 Sum_probs=158.6
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHH-hCCcEEEEECCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTAR 601 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg~g~ 601 (776)
..+.+.+.. +..+.+.+|.|+......++.|+||++||++........ ..|..++..|+ +.||.|+++|+||++.
T Consensus 54 ~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~--~~~~~~~~~la~~~g~~vv~~d~rg~~~ 129 (338)
T 2o7r_A 54 LTKDLALNP--LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAAS--TIFHDFCCEMAVHAGVVIASVDYRLAPE 129 (338)
T ss_dssp EEEEEEEET--TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTB--HHHHHHHHHHHHHHTCEEEEEECCCTTT
T ss_pred EEEEEEecC--CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCc--hhHHHHHHHHHHHCCcEEEEecCCCCCC
Confidence 456677765 455788888886530112578999999997643221111 11344567777 7899999999999765
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcC------CCCCCcEEEEeechHHHHHHHHHhhCCC--------ceEEEE
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG------LAKVGHIGLYGWSYGGYLSAITLARFPD--------VFQCAV 667 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~------~id~~~i~l~G~S~GG~~a~~~a~~~~~--------~~~~~v 667 (776)
+.. ...++|+.++++++.++. .+|.++++|+||||||.+++.++.++|+ +++++|
T Consensus 130 ~~~-----------~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~v 198 (338)
T 2o7r_A 130 HRL-----------PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLV 198 (338)
T ss_dssp TCT-----------THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEE
T ss_pred CCC-----------chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEE
Confidence 432 123789999999998762 2567899999999999999999998887 899999
Q ss_pred EcCCCCCccccccc-----------------ccccccCC--CCCCc--cchhcCC---hhhhhccCCCcEEEEecCCCCc
Q 004067 668 SGAPVTSWDGYDTF-----------------YTEKYMGL--PSEDP--VGYEYSS---VMHHVHKMKGKLLLVHGMIDEN 723 (776)
Q Consensus 668 ~~~~~~~~~~~~~~-----------------~~~~~~~~--~~~~~--~~~~~~~---~~~~~~~i~~P~lii~G~~D~~ 723 (776)
+.+|+.+....... +...+... ..... ..+.... .+..+.++.+|+|+++|++|.+
T Consensus 199 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~ 278 (338)
T 2o7r_A 199 LDEPGFGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPM 278 (338)
T ss_dssp EESCCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTT
T ss_pred EECCccCCCcCChhhhccCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcc
Confidence 99988654321000 00001100 00000 0001111 1233444566999999999998
Q ss_pred cChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCC--CCcHHHHHHHHHHHHHHhC
Q 004067 724 VHFRHTARLINALVAARKPYEILIFPDERHMPRR--HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 724 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~fl~~~l 776 (776)
++ ...++++++++.+.+++++++++++|.+.. ++...++.+.+.+||.+++
T Consensus 279 ~~--~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 279 ID--RQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HH--HHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred hH--HHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 86 457788999988999999999999998732 2334789999999997753
No 59
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.86 E-value=1.7e-21 Score=200.61 Aligned_cols=225 Identities=13% Similarity=0.120 Sum_probs=158.8
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchh
Q 004067 526 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 605 (776)
Q Consensus 526 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~ 605 (776)
...+... +..+...+|.|.... ++.|+||++|||+....... .+..++..|+++||.|+++|+|+++.....
T Consensus 58 ~~~i~y~-~~~~~~~~~~p~~~~---~~~p~vv~~HGgg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~ 129 (303)
T 4e15_A 58 VDHLRYG-EGRQLVDVFYSEKTT---NQAPLFVFVHGGYWQEMDMS----MSCSIVGPLVRRGYRVAVMDYNLCPQVTLE 129 (303)
T ss_dssp EEEEECS-STTCEEEEEECTTCC---TTCCEEEEECCSTTTSCCGG----GSCTTHHHHHHTTCEEEEECCCCTTTSCHH
T ss_pred eeeeccC-CCCcEEEEEecCCCC---CCCCEEEEECCCcCcCCChh----HHHHHHHHHHhCCCEEEEecCCCCCCCChh
Confidence 3344433 444677788886432 57899999999764332111 233457889999999999999998765421
Q ss_pred hhhhhhhccCCccHHHHHHHHHHHHHc-CCCCCCcEEEEeechHHHHHHHHHhhCC-------CceEEEEEcCCCCCccc
Q 004067 606 FEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFP-------DVFQCAVSGAPVTSWDG 677 (776)
Q Consensus 606 ~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~~~-------~~~~~~v~~~~~~~~~~ 677 (776)
....|+.++++++.+. ...+.++|+|+||||||++++.++.+.+ +.++++++.+|+.++..
T Consensus 130 -----------~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~ 198 (303)
T 4e15_A 130 -----------QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRE 198 (303)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHH
T ss_pred -----------HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHh
Confidence 1267889999999873 2235789999999999999999998654 27999999999988754
Q ss_pred ccc---cccccccCCCCCCccchhcCChh-hhhccC----CCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEec
Q 004067 678 YDT---FYTEKYMGLPSEDPVGYEYSSVM-HHVHKM----KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 749 (776)
Q Consensus 678 ~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i----~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 749 (776)
... .+....++.. ...+...+++ ..+..+ ++|+|++||++|..+++.++.++++++++.+.++++++++
T Consensus 199 ~~~~~~~~~~~~~~~~---~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 275 (303)
T 4e15_A 199 LSNLESVNPKNILGLN---ERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFK 275 (303)
T ss_dssp HHTCTTTSGGGTTCCC---TTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hhcccccchhhhhcCC---HHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeC
Confidence 432 2222222222 2334455555 455555 8999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 750 DERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 750 ~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
+++|.. ..+........+.+||.
T Consensus 276 g~~H~~-~~~~~~~~~~~l~~~l~ 298 (303)
T 4e15_A 276 GYDHFD-IIEETAIDDSDVSRFLR 298 (303)
T ss_dssp EEETTH-HHHGGGSTTSHHHHHHH
T ss_pred CCCchH-HHHHHhCCCcHHHHHHH
Confidence 999953 22233333344555543
No 60
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.86 E-value=7.2e-21 Score=196.77 Aligned_cols=231 Identities=17% Similarity=0.148 Sum_probs=162.7
Q ss_pred CCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhC-CcEEEEECCCCC
Q 004067 521 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-GILVWKLDNRGT 599 (776)
Q Consensus 521 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rg~ 599 (776)
....+.+.++..+| .+.+++|.|... .+.|+||++||++....... .+..++..|++. ||.|+++|+||+
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~~----~~~p~vv~~HGgg~~~g~~~----~~~~~~~~la~~~g~~v~~~d~rg~ 115 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKKA----AGLPAVLYYHGGGFVFGSIE----THDHICRRLSRLSDSVVVSVDYRLA 115 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSSC----SSEEEEEEECCSTTTSCCTG----GGHHHHHHHHHHHTCEEEEECCCCT
T ss_pred cceEEEEEecCCCC-cEEEEEEecCCC----CCCcEEEEECCCcccCCChh----hhHHHHHHHHHhcCCEEEEecCCCC
Confidence 44677888988777 899999999763 35799999999762111111 234456777765 999999999999
Q ss_pred CCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC---CCCCCcEEEEeechHHHHHHHHHhhCCC----ceEEEEEcCCC
Q 004067 600 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPV 672 (776)
Q Consensus 600 g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~~~----~~~~~v~~~~~ 672 (776)
|.+... ....|+.++++++.+.. .+|.++++|+||||||.+++.++.++++ .++++++.+|.
T Consensus 116 g~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~ 184 (311)
T 2c7b_A 116 PEYKFP-----------TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPV 184 (311)
T ss_dssp TTSCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCC
T ss_pred CCCCCC-----------ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCc
Confidence 876422 12678888888888752 4577899999999999999999987665 48999999998
Q ss_pred CCccccc----c----------------cccccccCCCCCCccchhcCChhh-hhccCCCcEEEEecCCCCccChHHHHH
Q 004067 673 TSWDGYD----T----------------FYTEKYMGLPSEDPVGYEYSSVMH-HVHKMKGKLLLVHGMIDENVHFRHTAR 731 (776)
Q Consensus 673 ~~~~~~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~P~lii~G~~D~~v~~~~~~~ 731 (776)
.++.... . .+.+.+...+.. ......+++. .+..+ .|+|+++|+.|.+++ ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~--~~~~ 259 (311)
T 2c7b_A 185 VNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEE--AYDFKASPLLADLGGL-PPALVVTAEYDPLRD--EGEL 259 (311)
T ss_dssp CCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTG--GGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHH
T ss_pred cCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCcc--ccCcccCcccccccCC-CcceEEEcCCCCchH--HHHH
Confidence 7731100 0 001111111110 0001112222 22333 399999999999885 5567
Q ss_pred HHHHHHHCCCCeEEEEecCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 004067 732 LINALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 732 ~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l 776 (776)
+++.++..+.+++++++++++|.+.. .+...++.+.+.+||++++
T Consensus 260 ~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (311)
T 2c7b_A 260 YAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGL 308 (311)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHh
Confidence 88888889999999999999998742 3456788999999999875
No 61
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.86 E-value=1.4e-20 Score=197.65 Aligned_cols=233 Identities=17% Similarity=0.158 Sum_probs=164.5
Q ss_pred ceEE-EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 524 PDIV-QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 524 ~~~~-~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
.+.+ .+.+.+|..+.++++.|.+ .+.|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+
T Consensus 34 ~~~~~~~~~~dg~~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S 101 (342)
T 3hju_A 34 YQDLPHLVNADGQYLFCRYWKPTG-----TPKALIFVSHGAGEHSG-------RYEELARMLMGLDLLVFAHDHVGHGQS 101 (342)
T ss_dssp TTSSCEEECTTSCEEEEEEECCSS-----CCSEEEEEECCTTCCGG-------GGHHHHHHHHTTTEEEEEECCTTSTTS
T ss_pred cccCceEEccCCeEEEEEEeCCCC-----CCCcEEEEECCCCcccc-------hHHHHHHHHHhCCCeEEEEcCCCCcCC
Confidence 3344 6788899999999999875 35699999999876644 345568889999999999999999988
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccc--
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT-- 680 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~-- 680 (776)
...... ........+|+.++++++..+. +..+++|+||||||++++.++.++|++++++|+.+|.........
T Consensus 102 ~~~~~~---~~~~~~~~~d~~~~l~~l~~~~--~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 176 (342)
T 3hju_A 102 EGERMV---VSDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATT 176 (342)
T ss_dssp CSSTTC---CSCTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSH
T ss_pred CCcCCC---cCcHHHHHHHHHHHHHHHHHhC--CCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhH
Confidence 643111 0011123678999999988763 556999999999999999999999999999999998765321100
Q ss_pred -----------cccc--------ccc-----------CCCCCCc----cch------hcCChhhhhccCCCcEEEEecCC
Q 004067 681 -----------FYTE--------KYM-----------GLPSEDP----VGY------EYSSVMHHVHKMKGKLLLVHGMI 720 (776)
Q Consensus 681 -----------~~~~--------~~~-----------~~~~~~~----~~~------~~~~~~~~~~~i~~P~lii~G~~ 720 (776)
.... .+. ..+.... ..+ ...+....+.++++|+|+++|+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~ 256 (342)
T 3hju_A 177 FKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSA 256 (342)
T ss_dssp HHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETT
T ss_pred HHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCC
Confidence 0000 000 0000000 000 00011245678899999999999
Q ss_pred CCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCC--CcHHHHHHHHHHHHHHh
Q 004067 721 DENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIERT 775 (776)
Q Consensus 721 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~fl~~~ 775 (776)
|..+++..+..+++.+. +.+++++++++++|.+... +...++...+.+||.++
T Consensus 257 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~ 311 (342)
T 3hju_A 257 DRLCDSKGAYLLMELAK--SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 311 (342)
T ss_dssp CSSSCHHHHHHHHHHCC--CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CcccChHHHHHHHHHcC--CCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence 99999998988888763 2368999999999987332 22456777899999875
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.86 E-value=4.6e-19 Score=185.16 Aligned_cols=319 Identities=10% Similarity=0.018 Sum_probs=211.0
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCC-CceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKT-CKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
.+..++|||||+.+++....+. +..+.... ........+ ...+....|+|
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~h------------------------~~~v~~~~~~~ 61 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPDA-----LIGPGIPRHARQINTLNH------------------------GEVVCAVTISN 61 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTTS-----SSSTTCCSEEEEEEEECC------------------------SSCCCEEEECS
T ss_pred ceeEEEECCCCCEEEeecCCCc-----EeccccCCccccceeccC------------------------CCceEEEEEec
Confidence 3578999999999996654332 33322222 222233332 24688999999
Q ss_pred cCCCceEEEEeCCCcEEEEeCCCCccceecCC----CCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCC
Q 004067 135 TSSKKKIIMVPLPDGIYFQDLSCSKPELKLSS----SSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGA 209 (776)
Q Consensus 135 ~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~----~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~ 209 (776)
||+.|+...++.|.+||+.+++....+.. .....+..+.|+|||+.|+.... +.|.+|++.+++........
T Consensus 62 ---~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 138 (337)
T 1gxr_A 62 ---PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT 138 (337)
T ss_dssp ---SSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE
T ss_pred ---CCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc
Confidence 99999999899999999988754312211 22334788999999999998875 57999999988743322111
Q ss_pred CCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEE
Q 004067 210 NGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 289 (776)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~ 289 (776)
.. ...+..+.|+||++.|+....+ ..|++
T Consensus 139 ~~---------------~~~i~~~~~~~~~~~l~~~~~d------------------------------------g~v~~ 167 (337)
T 1gxr_A 139 SS---------------APACYALAISPDSKVCFSCCSD------------------------------------GNIAV 167 (337)
T ss_dssp CS---------------SSCEEEEEECTTSSEEEEEETT------------------------------------SCEEE
T ss_pred cC---------------CCceEEEEECCCCCEEEEEeCC------------------------------------CcEEE
Confidence 10 0114478899999988876633 23789
Q ss_pred EEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeeccccc
Q 004067 290 VSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCF 369 (776)
Q Consensus 290 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 369 (776)
||+.+++....- ..+...+..+.|+|||+.++... .+..|++||+.+++............. -.|
T Consensus 168 ~d~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~~~~~~~~~~v~~---~~~ 232 (337)
T 1gxr_A 168 WDLHNQTLVRQF--------QGHTDGASCIDISNDGTKLWTGG----LDNTVRSWDLREGRQLQQHDFTSQIFS---LGY 232 (337)
T ss_dssp EETTTTEEEEEE--------CCCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTTEEEEEEECSSCEEE---EEE
T ss_pred EeCCCCceeeee--------ecccCceEEEEECCCCCEEEEEe----cCCcEEEEECCCCceEeeecCCCceEE---EEE
Confidence 999988755431 34566789999999999887665 455799999998876655544333211 113
Q ss_pred ccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCC
Q 004067 370 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 449 (776)
Q Consensus 370 ~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~ 449 (776)
+| ++.++++...+| .|++|++.+++...+..+...+..+. |+++|+.++..+. ++ .+.+|.+.
T Consensus 233 s~--------~~~~l~~~~~~~--~i~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~-dg--~i~~~~~~--- 295 (337)
T 1gxr_A 233 CP--------TGEWLAVGMESS--NVEVLHVNKPDKYQLHLHESCVLSLK-FAYCGKWFVSTGK-DN--LLNAWRTP--- 295 (337)
T ss_dssp CT--------TSSEEEEEETTS--CEEEEETTSSCEEEECCCSSCEEEEE-ECTTSSEEEEEET-TS--EEEEEETT---
T ss_pred CC--------CCCEEEEEcCCC--cEEEEECCCCCeEEEcCCccceeEEE-ECCCCCEEEEecC-CC--cEEEEECC---
Confidence 23 233555555566 79999999888777777766677665 9999997665543 33 35666554
Q ss_pred CCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 450 DWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 450 ~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
.+. ....+.....+..+.|+||++.|+..... ..|.++++
T Consensus 296 ~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~ 335 (337)
T 1gxr_A 296 YGA----SIFQSKESSSVLSCDISVDDKYIVTGSGD----KKATVYEV 335 (337)
T ss_dssp TCC----EEEEEECSSCEEEEEECTTSCEEEEEETT----SCEEEEEE
T ss_pred CCe----EEEEecCCCcEEEEEECCCCCEEEEecCC----CeEEEEEE
Confidence 232 33344444567788999999988776543 34777764
No 63
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.86 E-value=1.3e-20 Score=189.64 Aligned_cols=201 Identities=14% Similarity=0.181 Sum_probs=154.6
Q ss_pred CceEEEEEcC--CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCC
Q 004067 523 PPDIVQIQAN--DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 600 (776)
Q Consensus 523 ~~~~~~~~~~--dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g 600 (776)
..+.+.++.. ++. ..+.++.|... +.++.|+||++||.++... .+..++..|+++||.|+++|+||+|
T Consensus 24 ~~~~~~~~~~~~~~~-~~~~l~~p~~~--~~~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~g~g 93 (262)
T 1jfr_A 24 ATSQTSVSSLVASGF-GGGTIYYPTST--ADGTFGAVVISPGFTAYQS-------SIAWLGPRLASQGFVVFTIDTNTTL 93 (262)
T ss_dssp CEEEEEECTTTCSSS-CCEEEEEESCC--TTCCEEEEEEECCTTCCGG-------GTTTHHHHHHTTTCEEEEECCSSTT
T ss_pred CccceEecceeccCC-CceeEEecCCC--CCCCCCEEEEeCCcCCCch-------hHHHHHHHHHhCCCEEEEeCCCCCC
Confidence 3555666654 333 25667777652 2257899999999776543 2344678899999999999999998
Q ss_pred CCchhhhhhhhhccCCccHHHHHHHHHHHHH----cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc
Q 004067 601 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIK----QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 676 (776)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~----~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~ 676 (776)
.+... ...|+..+++++.+ ...++.++++++||||||++++.++.++|+ ++++|+.+|...
T Consensus 94 ~~~~~------------~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~-- 158 (262)
T 1jfr_A 94 DQPDS------------RGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT-- 158 (262)
T ss_dssp CCHHH------------HHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--
T ss_pred CCCch------------hHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc--
Confidence 66421 14578888888887 344577899999999999999999999988 789998877531
Q ss_pred cccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHH-HHHHHHHHHHCCCCeEEEEecCCCCCC
Q 004067 677 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINALVAARKPYEILIFPDERHMP 755 (776)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~ 755 (776)
...+.+++.|+|+++|++|..+++.. +..+++.+. .+.+++++++++++|.+
T Consensus 159 --------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~H~~ 211 (262)
T 1jfr_A 159 --------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLP-GSLDKAYLELRGASHFT 211 (262)
T ss_dssp --------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSC-TTSCEEEEEETTCCTTG
T ss_pred --------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhh-cCCCceEEEeCCCCcCC
Confidence 12345677999999999999999998 999999883 34678999999999987
Q ss_pred CCCCcHHHHHHHHHHHHHHhC
Q 004067 756 RRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 756 ~~~~~~~~~~~~~~~fl~~~l 776 (776)
. .+...++.+.+.+||+++|
T Consensus 212 ~-~~~~~~~~~~i~~fl~~~l 231 (262)
T 1jfr_A 212 P-NTSDTTIAKYSISWLKRFI 231 (262)
T ss_dssp G-GSCCHHHHHHHHHHHHHHH
T ss_pred c-ccchHHHHHHHHHHHHHHh
Confidence 3 3455789999999998764
No 64
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.86 E-value=4.1e-20 Score=186.93 Aligned_cols=225 Identities=12% Similarity=0.082 Sum_probs=157.6
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.....+.+.||..+++.++.|... ++.|+||++||++........| ...++..+++. |.|+++|+||++.+.
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~~----~~~~~vv~~HG~~~~~~~~~~~---~~~~~~~l~~~-~~v~~~d~~~~~~~~ 74 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKNQ----PTKGVIVYIHGGGLMFGKANDL---SPQYIDILTEH-YDLIQLSYRLLPEVS 74 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSSS----SCSEEEEEECCSTTTSCCTTCS---CHHHHHHHTTT-EEEEEECCCCTTTSC
T ss_pred ceEEEEecCCcEEEEEEEEccCCC----CCCCEEEEEECCcccCCchhhh---HHHHHHHHHhC-ceEEeeccccCCccc
Confidence 356778888999999999998753 4679999999977322211122 12456777777 999999999987654
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc----
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD---- 679 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~---- 679 (776)
.. ...+|+.++++++.++ ++.++++|+||||||.+++.++.+ +.++++|+.+|..+.....
T Consensus 75 ~~-----------~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~ 139 (275)
T 3h04_A 75 LD-----------CIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTT 139 (275)
T ss_dssp HH-----------HHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSC
T ss_pred cc-----------hhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccc
Confidence 21 1267899999999887 366899999999999999999998 7789999999987642100
Q ss_pred ------------ccccccccCCC-CC---Cccc----------------h-------hcC-ChhhhhccCCCcEEEEecC
Q 004067 680 ------------TFYTEKYMGLP-SE---DPVG----------------Y-------EYS-SVMHHVHKMKGKLLLVHGM 719 (776)
Q Consensus 680 ------------~~~~~~~~~~~-~~---~~~~----------------~-------~~~-~~~~~~~~i~~P~lii~G~ 719 (776)
......+.... .. .... + ... .....+.+++ |+|+++|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~ 218 (275)
T 3h04_A 140 NSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCN 218 (275)
T ss_dssp CHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEET
T ss_pred cchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecC
Confidence 00000000000 00 0000 0 000 0112235666 99999999
Q ss_pred CCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcH--HHHHHHHHHHHHHhC
Q 004067 720 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR--IYMEERIWEFIERTL 776 (776)
Q Consensus 720 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~~~~fl~~~l 776 (776)
+|..+++..+..+++.+ .+.+++++++++|.+...... .++.+.+.+||+++|
T Consensus 219 ~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 219 GDYDVPVEESEHIMNHV----PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAIT 273 (275)
T ss_dssp TCSSSCTHHHHHHHTTC----SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHhc----CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999888887754 567899999999998554443 789999999999874
No 65
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.85 E-value=1.5e-20 Score=211.58 Aligned_cols=245 Identities=16% Similarity=0.182 Sum_probs=176.5
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccc-cc---hhhh-HHHHhCCcEEEEECCCC
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN-TV---DMRA-QYLRSKGILVWKLDNRG 598 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~-~~---~~~~-~~l~~~G~~v~~~d~rg 598 (776)
.+.+.|++.||..|.+++|.|++. +++|+||++||..........+.. .+ ...+ +.|+++||+|+.+|+||
T Consensus 37 ~~~v~i~~~DG~~L~~~l~~P~~~----~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG 112 (652)
T 2b9v_A 37 KREVMVPMRDGVKLYTVIVIPKNA----RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRG 112 (652)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTT
T ss_pred EEEEEEECCCCcEEEEEEEecCCC----CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCc
Confidence 467889999999999999999763 578999999975433110001110 00 0113 78999999999999999
Q ss_pred CCCCchhhhhhh-----hhccCCccHHHHHHHHHHHHHc-CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCC
Q 004067 599 TARRGLKFEASI-----KHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 672 (776)
Q Consensus 599 ~g~~~~~~~~~~-----~~~~~~~~~~D~~~~i~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~ 672 (776)
+|+|+..+.... +..++..+.+|+.++++|+.++ ++.+ .+|+++|+||||++++.+++++++.++|+|+.+++
T Consensus 113 ~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~ 191 (652)
T 2b9v_A 113 KYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPM 191 (652)
T ss_dssp STTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEEC
T ss_pred CCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEecccc
Confidence 999987654321 1111236789999999999998 7766 59999999999999999999889999999999988
Q ss_pred CCccc---c--cccc----cccc------------------------------------------------cCCCCCCcc
Q 004067 673 TSWDG---Y--DTFY----TEKY------------------------------------------------MGLPSEDPV 695 (776)
Q Consensus 673 ~~~~~---~--~~~~----~~~~------------------------------------------------~~~~~~~~~ 695 (776)
.++.. + ...+ ..++ +..+ ....
T Consensus 192 ~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~d~ 270 (652)
T 2b9v_A 192 VDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHP-AYDA 270 (652)
T ss_dssp CCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCC-SSSH
T ss_pred cccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCC-CCCh
Confidence 87532 0 0000 0000 0000 0113
Q ss_pred chhcCChhhhhcc--CCCcEEEEecCCCCccChHHHHHHHHHHHHCC--CCeEEEEecCCCCCCCC-----C------C-
Q 004067 696 GYEYSSVMHHVHK--MKGKLLLVHGMIDENVHFRHTARLINALVAAR--KPYEILIFPDERHMPRR-----H------R- 759 (776)
Q Consensus 696 ~~~~~~~~~~~~~--i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~-----~------~- 759 (776)
.|...++..++.+ |++|+|++||..|.. +..++.+++++|++++ ++.++++.|. +|.... . .
T Consensus 271 yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~ 348 (652)
T 2b9v_A 271 FWQGQALDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGPLEFEGD 348 (652)
T ss_dssp HHHTTCHHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETTEECSSC
T ss_pred HHhcCChhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccCCccccccc
Confidence 3456688888999 999999999999997 6678899999999988 7888988886 786411 0 0
Q ss_pred -cHHHHHHHHHHHHHHhC
Q 004067 760 -DRIYMEERIWEFIERTL 776 (776)
Q Consensus 760 -~~~~~~~~~~~fl~~~l 776 (776)
......+.+.+||++||
T Consensus 349 ~~~~~~~~~~~~wfd~~L 366 (652)
T 2b9v_A 349 TAHQYRRDVFRPFFDEYL 366 (652)
T ss_dssp HHHHHHHHTHHHHHHHHH
T ss_pred cchhhhhhHHHHHHHHHh
Confidence 11334688899999886
No 66
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.85 E-value=3.5e-21 Score=198.97 Aligned_cols=232 Identities=20% Similarity=0.209 Sum_probs=165.1
Q ss_pred CCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhC-CcEEEEECCCCC
Q 004067 521 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-GILVWKLDNRGT 599 (776)
Q Consensus 521 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rg~ 599 (776)
....+.+.++..+| .+.+++|.|... .++.|+||++|||+....... .+..++..|+++ ||.|+++|+||+
T Consensus 45 ~~~~~~~~i~~~~g-~l~~~~~~P~~~---~~~~p~vv~~HGGg~~~g~~~----~~~~~~~~la~~~g~~v~~~d~rg~ 116 (310)
T 2hm7_A 45 VAEVREFDMDLPGR-TLKVRMYRPEGV---EPPYPALVYYHGGSWVVGDLE----THDPVCRVLAKDGRAVVFSVDYRLA 116 (310)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECTTC---CSSEEEEEEECCSTTTSCCTT----TTHHHHHHHHHHHTSEEEEECCCCT
T ss_pred cceEEEEEeccCCC-eEEEEEEecCCC---CCCCCEEEEECCCccccCChh----HhHHHHHHHHHhcCCEEEEeCCCCC
Confidence 34567888888777 899999999763 157899999999653322112 344557778775 999999999998
Q ss_pred CCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC---CCCCCcEEEEeechHHHHHHHHHhhCCC----ceEEEEEcCCC
Q 004067 600 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPV 672 (776)
Q Consensus 600 g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~~~----~~~~~v~~~~~ 672 (776)
+++... ...+|+.++++++.++. .++.++++|+||||||.+++.++.++++ .++++++.+|.
T Consensus 117 ~~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~ 185 (310)
T 2hm7_A 117 PEHKFP-----------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPS 185 (310)
T ss_dssp TTSCTT-----------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCC
T ss_pred CCCCCC-----------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCC
Confidence 876421 12678999999998864 3677899999999999999999987765 68999999998
Q ss_pred CCcc--cccccc-----------------cccccCCCCCCccchhcCChhh--hhccCCCcEEEEecCCCCccChHHHHH
Q 004067 673 TSWD--GYDTFY-----------------TEKYMGLPSEDPVGYEYSSVMH--HVHKMKGKLLLVHGMIDENVHFRHTAR 731 (776)
Q Consensus 673 ~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~P~lii~G~~D~~v~~~~~~~ 731 (776)
.+.. .....+ ...+...+.. ......++.. .+..+ .|+|+++|+.|..+ .++..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~ 260 (310)
T 2hm7_A 186 TGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEE--LTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKL 260 (310)
T ss_dssp CCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGG--GGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHH
T ss_pred cCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCc--cCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHH
Confidence 7654 110000 0011111000 0000112221 12232 39999999999987 57888
Q ss_pred HHHHHHHCCCCeEEEEecCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 004067 732 LINALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 732 ~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l 776 (776)
+++++.+.+.+++++++++++|.+.. .+...++.+.+.+||+++|
T Consensus 261 ~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 261 YAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp HHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999997642 2345788999999998874
No 67
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.85 E-value=1.3e-18 Score=196.67 Aligned_cols=310 Identities=15% Similarity=0.096 Sum_probs=219.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|+|||+.|+..+.. ..|.+|+..+...+.+..+. ..+....|+|
T Consensus 265 v~~v~~~~d~~~l~~~~~d-----~~i~~w~~~~~~~~~~~~h~------------------------~~v~~~~~~~-- 313 (577)
T 2ymu_A 265 VNGVAFRPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHS------------------------SSVWGVAFSP-- 313 (577)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCEEEEETTSCEEEEECCCS------------------------SCEEEEEECT--
T ss_pred EEEEEEcCCCCEEEEEeCC-----CEEEEEeCCCcEEEEEecCC------------------------CCeEEEEECC--
Confidence 4688999999999866552 35999998776666665432 3688899999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCce
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTV 214 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~ 214 (776)
||+.|+.. .++.|.+||+.+.... .+..... .+..++|+|||+.|+.... +.+.+++..+.....+......
T Consensus 314 -~~~~l~t~~~d~~i~~w~~~~~~~~-~~~~~~~-~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~--- 387 (577)
T 2ymu_A 314 -DGQTIASASDDKTVKLWNRNGQHLQ-TLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS--- 387 (577)
T ss_dssp -TSSEEEEEETTSCEEEEETTSCEEE-EECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSC---
T ss_pred -CCCEEEEEeCCCeEEEEeCCCCeeE-EEeCCCC-CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCC---
Confidence 99999876 6788999999988776 6655443 4778999999999998876 4688888765444444322211
Q ss_pred ecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC
Q 004067 215 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG 294 (776)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 294 (776)
+..++|||||+.|+....+ ..|++||..+
T Consensus 388 ---------------v~~~~~s~dg~~l~~~~~d------------------------------------~~v~~~~~~~ 416 (577)
T 2ymu_A 388 ---------------VRGVAFSPDGQTIASASDD------------------------------------KTVKLWNRNG 416 (577)
T ss_dssp ---------------EEEEEECTTSSCEEEEETT------------------------------------SEEEEECTTC
T ss_pred ---------------eEEEEECCCCCEEEEEeCC------------------------------------CEEEEEeCCC
Confidence 4578899999999876643 3478898766
Q ss_pred CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCC
Q 004067 295 GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDK 374 (776)
Q Consensus 295 ~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~ 374 (776)
.....+ ..+...+..++||||++.++..+ .+..|.+||.++...+.+..+....... .|+|
T Consensus 417 ~~~~~~---------~~~~~~v~~~~~s~d~~~l~~~~----~d~~v~~w~~~~~~~~~~~~~~~~v~~~---~~sp--- 477 (577)
T 2ymu_A 417 QLLQTL---------TGHSSSVWGVAFSPDDQTIASAS----DDKTVKLWNRNGQLLQTLTGHSSSVRGV---AFSP--- 477 (577)
T ss_dssp CEEEEE---------ECCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTSCEEEEEECCSSCEEEE---EECT---
T ss_pred CEEEEe---------cCCCCCeEEEEECCCCCEEEEEc----CCCEEEEEECCCCEEEEEcCCCCCEEEE---EEcC---
Confidence 655555 44566788999999999887765 3456999998766666665554432211 2333
Q ss_pred CccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCc
Q 004067 375 GVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHT 454 (776)
Q Consensus 375 ~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~ 454 (776)
++.++++...++ .|++|+.++...+.+..+...+..+. |+|||++|+. +..++ .+.||. . .|.
T Consensus 478 -----d~~~las~~~d~--~i~iw~~~~~~~~~~~~h~~~v~~l~-~s~dg~~l~s-~~~dg--~v~lwd--~--~~~-- 540 (577)
T 2ymu_A 478 -----DGQTIASASDDK--TVKLWNRNGQLLQTLTGHSSSVRGVA-FSPDGQTIAS-ASDDK--TVKLWN--R--NGQ-- 540 (577)
T ss_dssp -----TSCEEEEEETTS--EEEEEETTSCEEEEEECCSSCEEEEE-ECTTSSCEEE-EETTS--EEEEEC--T--TSC--
T ss_pred -----CCCEEEEEeCCC--EEEEEcCCCCEEEEEeCCCCCEEEEE-EcCCCCEEEE-EECcC--EEEEEe--C--CCC--
Confidence 334666666667 89999998888888887777777765 9999997654 44443 377776 3 343
Q ss_pred cccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEE
Q 004067 455 LEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCS 496 (776)
Q Consensus 455 ~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~ 496 (776)
.+..+..+. .+..+.|+|||++|+... .+. .|++||
T Consensus 541 --~~~~~~~h~~~v~~~~fs~dg~~l~s~~-~D~---~i~~Wd 577 (577)
T 2ymu_A 541 --LLQTLTGHSSSVWGVAFSPDGQTIASAS-SDK---TVKLWN 577 (577)
T ss_dssp --EEEEEECCSSCEEEEEECTTSSCEEEEE-TTS---CEEEEC
T ss_pred --EEEEEcCCCCCEEEEEEcCCCCEEEEEe-CCC---EEEEeC
Confidence 556666654 467899999999887643 322 366654
No 68
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.85 E-value=6e-21 Score=197.53 Aligned_cols=232 Identities=18% Similarity=0.195 Sum_probs=164.8
Q ss_pred CCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCC
Q 004067 520 QLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRG 598 (776)
Q Consensus 520 ~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg 598 (776)
.....+.+.++..+| .+.+++|.|... ++.|+||++||++....... .+..++..|++ .||.|+++|+||
T Consensus 47 ~~~~~~~~~i~~~~g-~~~~~~~~P~~~----~~~p~vv~~HGgg~~~g~~~----~~~~~~~~la~~~g~~v~~~d~rg 117 (313)
T 2wir_A 47 PIHRVEDITIPGRGG-PIRARVYRPRDG----ERLPAVVYYHGGGFVLGSVE----THDHVCRRLANLSGAVVVSVDYRL 117 (313)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECSCC----SSEEEEEEECCSTTTSCCTG----GGHHHHHHHHHHHCCEEEEEECCC
T ss_pred CCceEEEEEeeCCCC-cEEEEEEecCCC----CCccEEEEECCCcccCCChH----HHHHHHHHHHHHcCCEEEEeecCC
Confidence 455678899998777 899999999763 46799999999763221111 33445677776 599999999999
Q ss_pred CCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhCCCc----eEEEEEcCC
Q 004067 599 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAP 671 (776)
Q Consensus 599 ~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~~~~----~~~~v~~~~ 671 (776)
+|.+... ....|+.++++++.+. ..++.++|+|+|||+||.+++.++.++++. ++++++.+|
T Consensus 118 ~g~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p 186 (313)
T 2wir_A 118 APEHKFP-----------AAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYP 186 (313)
T ss_dssp TTTSCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESC
T ss_pred CCCCCCC-----------chHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcC
Confidence 9877421 1257888888888875 235777999999999999999999987766 999999999
Q ss_pred CCCccccc-cc-------------------ccccccCCCCCCccchhcCChhh-hhccCCCcEEEEecCCCCccChHHHH
Q 004067 672 VTSWDGYD-TF-------------------YTEKYMGLPSEDPVGYEYSSVMH-HVHKMKGKLLLVHGMIDENVHFRHTA 730 (776)
Q Consensus 672 ~~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~P~lii~G~~D~~v~~~~~~ 730 (776)
..++.... .. +...+.+.+.. ......+++. .+.. ..|+|+++|+.|..+ ..+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~sp~~~~~~~-~~P~lii~G~~D~~~--~~~~ 261 (313)
T 2wir_A 187 AVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQD--ALSPYASPIFADLSN-LPPALVITAEYDPLR--DEGE 261 (313)
T ss_dssp CCCCSSCCCHHHHHTCSGGGCSSCHHHHHHHHHHHCSSGGG--GGSTTTCGGGSCCTT-CCCEEEEEEEECTTH--HHHH
T ss_pred ccCCCCCCCcCHHHhcccCCCccCHHHHHHHHHHhCCCCCc--cCCCccCcCcccccC-CCcceEEEcCcCcCh--HHHH
Confidence 87721110 00 00111111100 0001123331 1122 259999999999987 4678
Q ss_pred HHHHHHHHCCCCeEEEEecCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 004067 731 RLINALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 731 ~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l 776 (776)
.+++++++.+.+++++++++++|.+.. .+...++.+.+.+||++++
T Consensus 262 ~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 311 (313)
T 2wir_A 262 LYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMA 311 (313)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999998742 2445788999999998764
No 69
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=1.4e-19 Score=185.22 Aligned_cols=256 Identities=14% Similarity=0.172 Sum_probs=184.9
Q ss_pred cceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEeCCCcEEEEeCCC-C
Q 004067 80 SRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVPLPDGIYFQDLSC-S 158 (776)
Q Consensus 80 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~-~ 158 (776)
...|++||+.+++.+++..+. ..+..+.|+| ||++|++..++.|++||+.+ +
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~------------------------~~v~~~~~sp---dg~~l~~~~~~~i~~~d~~~~~ 73 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP------------------------ELFEAPNWSP---DGKYLLLNSEGLLYRLSLAGDP 73 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES------------------------SCCEEEEECT---TSSEEEEEETTEEEEEESSSCC
T ss_pred ceeEEEEeCCCCceeeeccCC------------------------cceEeeEECC---CCCEEEEEcCCeEEEEeCCCCC
Confidence 468999999999988777542 3688999999 99999999999999999999 8
Q ss_pred ccceecCCCC-CCCccCceeCCCCCEEEEEE-----CCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcce
Q 004067 159 KPELKLSSSS-CSPVIDPHLSSDGTMIAFVR-----DCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTG 232 (776)
Q Consensus 159 ~~~~~l~~~~-~~~~~~~~~SpDg~~la~~~-----~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (776)
+.. .+.... ...+..+.|||||+.|++.. ...||.+++.++..++++.... ...
T Consensus 74 ~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------------------~~~ 133 (297)
T 2ojh_A 74 SPE-KVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP-------------------SYW 133 (297)
T ss_dssp SCE-ECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS-------------------EEE
T ss_pred Cce-EeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC-------------------ccc
Confidence 877 555433 23467899999999999998 3479999999888777654321 235
Q ss_pred EEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCC
Q 004067 233 YWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYD 312 (776)
Q Consensus 233 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 312 (776)
+.|||||+.|+|.....+ ...|+.+++++++...+ ...
T Consensus 134 ~~~spdg~~l~~~~~~~~---------------------------------~~~l~~~~~~~~~~~~~---------~~~ 171 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRDQ---------------------------------VFDIYSMDIDSGVETRL---------THG 171 (297)
T ss_dssp EEECTTSSEEEEEEEETT---------------------------------EEEEEEEETTTCCEEEC---------CCS
T ss_pred eEECCCCCEEEEEECCCC---------------------------------ceEEEEEECCCCcceEc---------ccC
Confidence 789999999998764321 25678888888887665 344
Q ss_pred cceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccC--
Q 004067 313 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT-- 390 (776)
Q Consensus 313 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-- 390 (776)
...+..+.|+|||+.+++..... ....||.+++.++..+.+..+....+ ...|+| ++..+++.+...
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~s~-------dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRT-GQMQIWRVRVDGSSVERITDSAYGDW---FPHPSP-------SGDKVVFVSYDADV 240 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTSSCEEECCCCSEEEE---EEEECT-------TSSEEEEEEEETTC
T ss_pred CCccccceECCCCCEEEEEecCC-CCccEEEECCCCCCcEEEecCCcccC---CeEECC-------CCCEEEEEEcCCCC
Confidence 56678899999999888776433 45678999988887777654432211 112333 334466665543
Q ss_pred ------CceEEEEEeCCCceeecccc---CCeEEEEEEeecCCCcEEEEEEccCC
Q 004067 391 ------GFRHLYLHDINGTCLGPITE---GDWMVEQIVGVNEASGQVYFTGTLDG 436 (776)
Q Consensus 391 ------g~~~l~~~~~~g~~~~~lt~---~~~~~~~~~~~s~dg~~i~~~~~~~~ 436 (776)
+...|++|++++++.+.+.. +...+.. +.|+|||+.|++.+..++
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNS-PNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCS-CCBCTTSSEEEEEEECCC
T ss_pred CcccccCceEEEEEecCCCCceeeeccCCCCccccc-ceECCCCCEEEEEEeccC
Confidence 33689999999887665543 2222333 359999999998887643
No 70
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.85 E-value=1.2e-20 Score=191.98 Aligned_cols=242 Identities=14% Similarity=0.057 Sum_probs=166.4
Q ss_pred CceEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 523 PPDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 523 ~~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
..+.+.+.+ .+|..+.+.+|.|++.. ..+++|+||++||+++... .|... ......+++.||+|+++|.+++|.
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~~p~vv~lHG~~~~~~---~~~~~-~~~~~~~~~~g~~vv~pd~~~~g~ 90 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQAS-TGAKVPVLYWLSGLTCSDE---NFMQK-AGAQRLAAELGIAIVAPDTSPRGE 90 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG-TTCCEEEEEEECCTTCCSS---HHHHH-SCCHHHHHHHTCEEEEECSSCCST
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCC-CCCCccEEEEecCCCCChh---HHhhc-ccHHHHHhhCCeEEEEeCCccccc
Confidence 345666765 47889999999998742 2368999999999876543 23211 113566778899999999986654
Q ss_pred Cchh-----------hh-hhhhhcc-CCccHHH-H-HHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEE
Q 004067 602 RGLK-----------FE-ASIKHNC-GRIDAED-Q-LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 666 (776)
Q Consensus 602 ~~~~-----------~~-~~~~~~~-~~~~~~D-~-~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~ 666 (776)
.... +. ......+ ......+ + ...+.++.+...+ .++++|+||||||++|+.++.++|++|+++
T Consensus 91 ~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 169 (280)
T 3i6y_A 91 GVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSV 169 (280)
T ss_dssp TCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCE
T ss_pred ccCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEE
Confidence 2111 00 0000000 0001122 2 2344455454434 579999999999999999999999999999
Q ss_pred EEcCCCCCcccccc--cccccccCCCCCCccchhcCChhhhhccCC--CcEEEEecCCCCccChHH-HHHHHHHHHHCCC
Q 004067 667 VSGAPVTSWDGYDT--FYTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRH-TARLINALVAARK 741 (776)
Q Consensus 667 v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~v~~~~-~~~~~~~l~~~~~ 741 (776)
++.+|..+...... .....+++. ....+...++...+.+++ .|+|++||+.|.+++... ++.+++.+++.+.
T Consensus 170 v~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~ 246 (280)
T 3i6y_A 170 SAFSPINNPVNCPWGQKAFTAYLGK---DTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNY 246 (280)
T ss_dssp EEESCCCCGGGSHHHHHHHHHHHCS---CGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTC
T ss_pred EEeCCccccccCchHHHHHHHhcCC---chHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCC
Confidence 99999877543210 011112222 234556677777777776 799999999999998755 8899999999999
Q ss_pred CeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 742 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 742 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+++++++|+++|.+. ....+....++|+.++|
T Consensus 247 ~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l 278 (280)
T 3i6y_A 247 PLELRSHEGYDHSYY---FIASFIEDHLRFHSNYL 278 (280)
T ss_dssp CEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCccHH---HHHHhHHHHHHHHHhhc
Confidence 999999999999763 34567788889988764
No 71
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.85 E-value=5.9e-20 Score=188.64 Aligned_cols=230 Identities=17% Similarity=0.158 Sum_probs=162.2
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhh
Q 004067 528 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 607 (776)
Q Consensus 528 ~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~ 607 (776)
.+...+|.++.++++.|.+ ++.|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+.....
T Consensus 21 ~~~~~~g~~l~~~~~~~~~-----~~~~~vv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 88 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG-----TPKALIFVSHGAGEHSG-------RYEELARMLMGLDLLVFAHDHVGHGQSEGERM 88 (303)
T ss_dssp EEECTTSCEEEEEEECCSS-----CCSEEEEEECCTTCCGG-------GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTT
T ss_pred eEecCCCeEEEEEEeccCC-----CCCeEEEEECCCCchhh-------HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCC
Confidence 6778899999999999875 35699999999876543 34556888999999999999999998864311
Q ss_pred hhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc--------
Q 004067 608 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-------- 679 (776)
Q Consensus 608 ~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-------- 679 (776)
.. .......+|+.++++++..+. +..+++++||||||.+++.++.++|++++++++.+|........
T Consensus 89 ~~---~~~~~~~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 163 (303)
T 3pe6_A 89 VV---SDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLA 163 (303)
T ss_dssp CC---SSTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHH
Confidence 10 001123678888888887763 45689999999999999999999999999999999876532100
Q ss_pred cccccccc-----CCCC-----CCc---cchh---------------------cCChhhhhccCCCcEEEEecCCCCccC
Q 004067 680 TFYTEKYM-----GLPS-----EDP---VGYE---------------------YSSVMHHVHKMKGKLLLVHGMIDENVH 725 (776)
Q Consensus 680 ~~~~~~~~-----~~~~-----~~~---~~~~---------------------~~~~~~~~~~i~~P~lii~G~~D~~v~ 725 (776)
......+. .... ... ..+. .......+.++++|+|+++|++|..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 243 (303)
T 3pe6_A 164 AKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCD 243 (303)
T ss_dssp HHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBC
T ss_pred HHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCC
Confidence 00000000 0000 000 0000 001124467889999999999999999
Q ss_pred hHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCC--CcHHHHHHHHHHHHHHhC
Q 004067 726 FRHTARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIERTL 776 (776)
Q Consensus 726 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~fl~~~l 776 (776)
+..+..+.+.+. +.++++++++++||.+... +...++...+.+||++++
T Consensus 244 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 244 SKGAYLLMELAK--SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp HHHHHHHHHHCC--CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHhcc--cCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 998988888763 2368999999999987332 224567788999998764
No 72
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.85 E-value=6.8e-21 Score=193.51 Aligned_cols=241 Identities=13% Similarity=0.095 Sum_probs=166.5
Q ss_pred ceEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 524 PDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 524 ~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
.+.+.+.+ ..|..+.+.+|.|+... .+++|+||++||+++... .|... ......+.+.||+|+++|+||+|.+
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~--~~~~p~vv~lHG~~~~~~---~~~~~-~~~~~~~~~~g~~vv~~d~~g~G~s 88 (278)
T 3e4d_A 15 QGVFSHQSETLKSEMTFAVYVPPKAI--HEPCPVVWYLSGLTCTHA---NVMEK-GEYRRMASELGLVVVCPDTSPRGND 88 (278)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG--TSCEEEEEEECCTTCCSH---HHHHH-SCCHHHHHHHTCEEEECCSSCCSTT
T ss_pred EEEEEEeccccCCcceEEEEcCCCCC--CCCCCEEEEEcCCCCCcc---chhhc-ccHHHHHhhCCeEEEecCCcccCcc
Confidence 44566654 46888999999998741 368999999999876543 22211 1135566677999999999999876
Q ss_pred chhhhhh--------hhhcc------CCccHHHH--HHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEE
Q 004067 603 GLKFEAS--------IKHNC------GRIDAEDQ--LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 666 (776)
Q Consensus 603 ~~~~~~~--------~~~~~------~~~~~~D~--~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~ 666 (776)
....... ..... ......+. ...++++.+...+|+++++|+||||||++|+.++.++|++|+++
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 168 (278)
T 3e4d_A 89 VPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSC 168 (278)
T ss_dssp SCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCE
T ss_pred cccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceE
Confidence 4321000 00000 01112222 23566666665677789999999999999999999999999999
Q ss_pred EEcCCCCCcccccc--cccccccCCCCCCccchhcCChhhhhccCC--CcEEEEecCCCCccChHH-HHHHHHHHHHCCC
Q 004067 667 VSGAPVTSWDGYDT--FYTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRH-TARLINALVAARK 741 (776)
Q Consensus 667 v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~v~~~~-~~~~~~~l~~~~~ 741 (776)
++.+|..+...... .....+++. ....+...++...+.+++ .|+|++||+.|..++... +..+.+.+++.+.
T Consensus 169 v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~ 245 (278)
T 3e4d_A 169 SAFAPIVAPSSADWSEPALEKYLGA---DRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDI 245 (278)
T ss_dssp EEESCCSCGGGCTTTHHHHHHHHCS---CGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSC
T ss_pred EEeCCcccccCCccchhhHHHhcCC---cHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcCC
Confidence 99999876532110 001112222 233455666766666665 499999999999998532 6889999999999
Q ss_pred CeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 742 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 742 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+++++++|+++|.+. ........+++|+.++|
T Consensus 246 ~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l 277 (278)
T 3e4d_A 246 GLTLRMHDRYDHSYY---FISTFMDDHLKWHAERL 277 (278)
T ss_dssp EEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCcCHH---HHHHHHHHHHHHHHHhc
Confidence 999999999999763 24566788888988764
No 73
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.85 E-value=2.9e-18 Score=193.74 Aligned_cols=319 Identities=15% Similarity=0.129 Sum_probs=224.8
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+..+.. ..|.+|+.++...+.+..+. ..+....|+|
T Consensus 224 v~~~~~s~dg~~l~~~~~d-----~~i~~w~~~~~~~~~~~~~~------------------------~~v~~v~~~~-- 272 (577)
T 2ymu_A 224 VRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHS------------------------SSVNGVAFRP-- 272 (577)
T ss_dssp EEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECCCS------------------------SCEEEEEECT--
T ss_pred EEEEEECCCCCEEEEEeCC-----CEEEEEeCCCCEEEEEecCC------------------------CCEEEEEEcC--
Confidence 4688999999999876542 36999998766655555432 3688899999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCce
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTV 214 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~ 214 (776)
||+.|+.. .++.|++||..+.... .+..... .+...+|+|||+.|+.... +.|.+|++.+.....+......
T Consensus 273 -d~~~l~~~~~d~~i~~w~~~~~~~~-~~~~h~~-~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~--- 346 (577)
T 2ymu_A 273 -DGQTIASASDDKTVKLWNRNGQLLQ-TLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSS--- 346 (577)
T ss_dssp -TSSEEEEEETTSCEEEEETTSCEEE-EECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSC---
T ss_pred -CCCEEEEEeCCCEEEEEeCCCcEEE-EEecCCC-CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCC---
Confidence 99999876 6788999998776555 5554433 4778899999999998875 4699999887766655432211
Q ss_pred ecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC
Q 004067 215 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG 294 (776)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 294 (776)
+..++|+|||+.|+....+ ..+.+||..+
T Consensus 347 ---------------v~~~~~s~~g~~l~~~~~d------------------------------------g~v~~~~~~~ 375 (577)
T 2ymu_A 347 ---------------VWGVAFSPDGQTIASASDD------------------------------------KTVKLWNRNG 375 (577)
T ss_dssp ---------------EEEEEECTTSSEEEEEETT------------------------------------SEEEEEETTC
T ss_pred ---------------EEEEEECCCCCEEEEEeCC------------------------------------CEEEEEcCCC
Confidence 4478899999999876632 3478899776
Q ss_pred CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCC
Q 004067 295 GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDK 374 (776)
Q Consensus 295 ~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~ 374 (776)
.....+ ..+...+..++|||||+.|+... .+..|.+||..+...+.+..+....+.. .|+|
T Consensus 376 ~~~~~~---------~~~~~~v~~~~~s~dg~~l~~~~----~d~~v~~~~~~~~~~~~~~~~~~~v~~~---~~s~--- 436 (577)
T 2ymu_A 376 QLLQTL---------TGHSSSVRGVAFSPDGQTIASAS----DDKTVKLWNRNGQLLQTLTGHSSSVWGV---AFSP--- 436 (577)
T ss_dssp CEEEEE---------ECCSSCEEEEEECTTSSCEEEEE----TTSEEEEECTTCCEEEEEECCSSCEEEE---EECT---
T ss_pred CEEEEe---------cCCCCCeEEEEECCCCCEEEEEe----CCCEEEEEeCCCCEEEEecCCCCCeEEE---EECC---
Confidence 655555 34566788999999999877665 3456899997665555555544443321 2333
Q ss_pred CccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCc
Q 004067 375 GVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHT 454 (776)
Q Consensus 375 ~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~ 454 (776)
++.++++...++ .|.+|+.++.....+..+...+..+. |+|||+.|+..+ .++ .+.+|. . .|.
T Consensus 437 -----d~~~l~~~~~d~--~v~~w~~~~~~~~~~~~~~~~v~~~~-~spd~~~las~~-~d~--~i~iw~--~--~~~-- 499 (577)
T 2ymu_A 437 -----DDQTIASASDDK--TVKLWNRNGQLLQTLTGHSSSVRGVA-FSPDGQTIASAS-DDK--TVKLWN--R--NGQ-- 499 (577)
T ss_dssp -----TSSEEEEEETTS--EEEEEETTSCEEEEEECCSSCEEEEE-ECTTSCEEEEEE-TTS--EEEEEE--T--TSC--
T ss_pred -----CCCEEEEEcCCC--EEEEEECCCCEEEEEcCCCCCEEEEE-EcCCCCEEEEEe-CCC--EEEEEc--C--CCC--
Confidence 334555665666 89999998888888887777777665 999999765544 333 367775 4 443
Q ss_pred cccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEee
Q 004067 455 LEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 506 (776)
Q Consensus 455 ~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l 506 (776)
.+..+..+. .+..+.|||||++|+..... ..|++||. +++.+..+
T Consensus 500 --~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d----g~v~lwd~-~~~~~~~~ 545 (577)
T 2ymu_A 500 --LLQTLTGHSSSVRGVAFSPDGQTIASASDD----KTVKLWNR-NGQLLQTL 545 (577)
T ss_dssp --EEEEEECCSSCEEEEEECTTSSCEEEEETT----SEEEEECT-TSCEEEEE
T ss_pred --EEEEEeCCCCCEEEEEEcCCCCEEEEEECc----CEEEEEeC-CCCEEEEE
Confidence 456666554 46788999999988765432 36899886 56654444
No 74
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.85 E-value=2.8e-20 Score=192.60 Aligned_cols=230 Identities=15% Similarity=0.116 Sum_probs=162.6
Q ss_pred CCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCCC
Q 004067 522 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTA 600 (776)
Q Consensus 522 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~g 600 (776)
...+.+.++..++ .+.+++|.|... ++.|+||++|||+....-.. .+..++..|++ .||.|+++|+||++
T Consensus 63 ~~~~~~~i~~~~~-~i~~~iy~P~~~----~~~p~vv~~HGGg~~~g~~~----~~~~~~~~La~~~g~~Vv~~Dyrg~~ 133 (323)
T 3ain_A 63 GKIEDITIPGSET-NIKARVYYPKTQ----GPYGVLVYYHGGGFVLGDIE----SYDPLCRAITNSCQCVTISVDYRLAP 133 (323)
T ss_dssp SEEEEEEEECSSS-EEEEEEEECSSC----SCCCEEEEECCSTTTSCCTT----TTHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred cEEEEEEecCCCC-eEEEEEEecCCC----CCCcEEEEECCCccccCChH----HHHHHHHHHHHhcCCEEEEecCCCCC
Confidence 4567888887777 799999999762 46799999999763322111 34455777775 59999999999998
Q ss_pred CCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC-C-CCCcEEEEeechHHHHHHHHHhhCCCce---EEEEEcCCCCCc
Q 004067 601 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL-A-KVGHIGLYGWSYGGYLSAITLARFPDVF---QCAVSGAPVTSW 675 (776)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~-i-d~~~i~l~G~S~GG~~a~~~a~~~~~~~---~~~v~~~~~~~~ 675 (776)
.+... ...+|+.++++++.++.. . |.++|+|+|+||||.+|+.++.++++.. ++.++.+|..+.
T Consensus 134 ~~~~p-----------~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~ 202 (323)
T 3ain_A 134 ENKFP-----------AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSF 202 (323)
T ss_dssp TSCTT-----------HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSC
T ss_pred CCCCc-----------chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccC
Confidence 76421 126789999999987631 1 6789999999999999999998877665 888999988764
Q ss_pred cccccc-----------------ccccccCCCCCCccchhcCChhhh-hccCCCcEEEEecCCCCccChHHHHHHHHHHH
Q 004067 676 DGYDTF-----------------YTEKYMGLPSEDPVGYEYSSVMHH-VHKMKGKLLLVHGMIDENVHFRHTARLINALV 737 (776)
Q Consensus 676 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~ 737 (776)
...... +...+...... ......+++.. +..+ .|+|+++|+.|.++ ..+..++++++
T Consensus 203 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~--~~~~~~a~~l~ 277 (323)
T 3ain_A 203 DLITKSLYDNGEGFFLTREHIDWFGQQYLRSFAD--LLDFRFSPILADLNDL-PPALIITAEHDPLR--DQGEAYANKLL 277 (323)
T ss_dssp CSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGG--GGCTTTCGGGSCCTTC-CCEEEEEETTCTTH--HHHHHHHHHHH
T ss_pred CCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcc--cCCcccCcccCcccCC-CHHHEEECCCCccH--HHHHHHHHHHH
Confidence 321110 00111111100 00001223222 2222 49999999999987 46788999999
Q ss_pred HCCCCeEEEEecCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 004067 738 AARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 738 ~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l 776 (776)
+.+.+++++++++++|.+.. .+...++.+.+.+||+++|
T Consensus 278 ~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 278 QSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp HTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998743 2446788999999998764
No 75
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.85 E-value=1.2e-20 Score=190.41 Aligned_cols=229 Identities=18% Similarity=0.175 Sum_probs=155.4
Q ss_pred eEEEE-EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 525 DIVQI-QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 525 ~~~~~-~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
+.+.+ .+.+|..+.+..+.+.+ .+.|+||++||++++.. .| .+..++..+++.||.|+++|+||+|.+.
T Consensus 12 ~~~~~~~~~~g~~l~~~~~~~~~-----~~~~~vv~~HG~~~~~~---~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 81 (270)
T 3llc_A 12 HAITVGQGSDARSIAALVRAPAQ-----DERPTCIWLGGYRSDMT---GT--KALEMDDLAASLGVGAIRFDYSGHGASG 81 (270)
T ss_dssp EEEEESSGGGCEEEEEEEECCSS-----TTSCEEEEECCTTCCTT---SH--HHHHHHHHHHHHTCEEEEECCTTSTTCC
T ss_pred ceEEEeeccCcceEEEEeccCCC-----CCCCeEEEECCCccccc---cc--hHHHHHHHHHhCCCcEEEeccccCCCCC
Confidence 34444 45689999998887654 24589999999766532 12 1223567788889999999999999886
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhh---CC---CceEEEEEcCCCCCccc
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR---FP---DVFQCAVSGAPVTSWDG 677 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~---~~---~~~~~~v~~~~~~~~~~ 677 (776)
.......... ..+|+.++++++ ..++++++||||||.+++.++.+ +| +.++++++.+|..++..
T Consensus 82 ~~~~~~~~~~----~~~d~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~ 151 (270)
T 3llc_A 82 GAFRDGTISR----WLEEALAVLDHF------KPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTS 151 (270)
T ss_dssp SCGGGCCHHH----HHHHHHHHHHHH------CCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHH
T ss_pred CccccccHHH----HHHHHHHHHHHh------ccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchh
Confidence 5432211111 134455555444 25689999999999999999999 99 89999999999876432
Q ss_pred c------cccc------------cccccCCCCCCc----cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHH
Q 004067 678 Y------DTFY------------TEKYMGLPSEDP----VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINA 735 (776)
Q Consensus 678 ~------~~~~------------~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~ 735 (776)
. .... ...+...+.... ..+........+.++++|+|+++|++|..+++..+..+++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~ 231 (270)
T 3llc_A 152 DLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEH 231 (270)
T ss_dssp HTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHh
Confidence 0 0000 000000000000 11112223445677889999999999999999988888887
Q ss_pred HHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 736 LVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 736 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+. +.+++++++++++|.+...+....+.+.+.+||++.
T Consensus 232 ~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 232 LP--ADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp SC--SSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC--
T ss_pred cC--CCCeeEEEeCCCcccccccccHHHHHHHHHHHhcCC
Confidence 62 234899999999998766677888899999998753
No 76
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.85 E-value=1.3e-20 Score=194.05 Aligned_cols=190 Identities=16% Similarity=0.210 Sum_probs=151.8
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.+|.. .+.++.|... .+.|+||++||+++... .|..+++.|+++||.|+++|+||+|.+....
T Consensus 79 ~~g~~-~~~~~~p~~~----~~~p~vv~~HG~~~~~~-------~~~~~~~~la~~G~~vv~~d~~g~g~s~~~~----- 141 (306)
T 3vis_A 79 ADGFG-GGTIYYPREN----NTYGAIAISPGYTGTQS-------SIAWLGERIASHGFVVIAIDTNTTLDQPDSR----- 141 (306)
T ss_dssp CSSSC-CEEEEEESSC----SCEEEEEEECCTTCCHH-------HHHHHHHHHHTTTEEEEEECCSSTTCCHHHH-----
T ss_pred cCCCc-ceEEEeeCCC----CCCCEEEEeCCCcCCHH-------HHHHHHHHHHhCCCEEEEecCCCCCCCcchH-----
Confidence 34543 4677777664 36899999999776543 3455688899999999999999998775321
Q ss_pred hccCCccHHHHHHHHHHHHHc------CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccccccc
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQ------GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK 685 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~------~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 685 (776)
..|+.++++++.+. ..++.++++++||||||++++.++.++|+ ++++++++|...
T Consensus 142 -------~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~----------- 202 (306)
T 3vis_A 142 -------ARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL----------- 202 (306)
T ss_dssp -------HHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----------
T ss_pred -------HHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC-----------
Confidence 46788889999887 66788999999999999999999999998 788888877532
Q ss_pred ccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChH-HHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHH
Q 004067 686 YMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR-HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYM 764 (776)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 764 (776)
...+.+++.|+|+++|++|..+++. +...+++.+...+ +++++++++++|.+ ..+...++
T Consensus 203 -----------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~-~~~~~~~~ 263 (306)
T 3vis_A 203 -----------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFA-PNITNKTI 263 (306)
T ss_dssp -----------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTG-GGSCCHHH
T ss_pred -----------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccc-hhhchhHH
Confidence 0124567799999999999999998 6899999886554 89999999999987 33445788
Q ss_pred HHHHHHHHHHhC
Q 004067 765 EERIWEFIERTL 776 (776)
Q Consensus 765 ~~~~~~fl~~~l 776 (776)
.+.+.+||+++|
T Consensus 264 ~~~i~~fl~~~l 275 (306)
T 3vis_A 264 GMYSVAWLKRFV 275 (306)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 999999998864
No 77
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.85 E-value=1.5e-20 Score=201.71 Aligned_cols=233 Identities=15% Similarity=0.153 Sum_probs=164.6
Q ss_pred CCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 522 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 522 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
...+.+.++. +|..+.++++.+.. ++.|+||++||..++.. .| .......+.+.||.|+++|+||+|.
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~~~-----~~~p~vv~~HG~~~~~~---~~---~~~~~~~~~~~g~~vi~~D~~G~G~ 200 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIISED-----KAQDTLIVVGGGDTSRE---DL---FYMLGYSGWEHDYNVLMVDLPGQGK 200 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECCSS-----SCCCEEEEECCSSCCHH---HH---HHHTHHHHHHTTCEEEEECCTTSTT
T ss_pred CCcEEEEEeE-CCeEEEEEEEcCCC-----CCCCEEEEECCCCCCHH---HH---HHHHHHHHHhCCcEEEEEcCCCCcC
Confidence 4578888887 67889999885432 45699999999766543 12 1122335668999999999999998
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 681 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~ 681 (776)
+..... ........|+.++++++..+. .+|+|+||||||++++.++..+| +++++|+.+|+.++......
T Consensus 201 s~~~~~-----~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~ 270 (405)
T 3fnb_A 201 NPNQGL-----HFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRI 270 (405)
T ss_dssp GGGGTC-----CCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHH
T ss_pred CCCCCC-----CCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHH
Confidence 743211 122234678888888886543 68999999999999999999998 78999999999876422110
Q ss_pred ccccccCCCCC------------------------------Cc----cchhcCChhhhhccCCCcEEEEecCCCCccChH
Q 004067 682 YTEKYMGLPSE------------------------------DP----VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR 727 (776)
Q Consensus 682 ~~~~~~~~~~~------------------------------~~----~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~ 727 (776)
........+.. .. ..+....+...+.++++|+|+++|+.|..+++.
T Consensus 271 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~ 350 (405)
T 3fnb_A 271 SFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMR 350 (405)
T ss_dssp HCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHH
T ss_pred hhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChH
Confidence 00000000000 00 000111111226788999999999999999999
Q ss_pred HHHHHHHHHHHCCCCeEEEEecCCCCCC--CCCCcHHHHHHHHHHHHHHhC
Q 004067 728 HTARLINALVAARKPYEILIFPDERHMP--RRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 728 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~~~~fl~~~l 776 (776)
.+..+++.+...+.++++++++++.|.. ...+....+.+.+.+||+++|
T Consensus 351 ~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l 401 (405)
T 3fnb_A 351 QSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIF 401 (405)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHh
Confidence 9999999999988899999996655542 256778899999999999864
No 78
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.85 E-value=1.7e-19 Score=174.02 Aligned_cols=197 Identities=17% Similarity=0.142 Sum_probs=154.0
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchh--hhHHHHhCCcEEEEECCCCCCC
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM--RAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~--~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
.+...+.. +|.++++++|.|.+ +.|+||++||+++... .+.. ++..|+++||.|+++|+||+|.
T Consensus 4 ~~~~~~~~-~g~~l~~~~~~~~~------~~~~vv~~hG~~~~~~-------~~~~~~~~~~l~~~G~~v~~~d~~g~g~ 69 (207)
T 3bdi_A 4 LQEEFIDV-NGTRVFQRKMVTDS------NRRSIALFHGYSFTSM-------DWDKADLFNNYSKIGYNVYAPDYPGFGR 69 (207)
T ss_dssp CEEEEEEE-TTEEEEEEEECCTT------CCEEEEEECCTTCCGG-------GGGGGTHHHHHHTTTEEEEEECCTTSTT
T ss_pred ceeEEEee-CCcEEEEEEEeccC------CCCeEEEECCCCCCcc-------ccchHHHHHHHHhCCCeEEEEcCCcccc
Confidence 44555554 88899999999865 3489999999876643 2334 6788999999999999999988
Q ss_pred C---chhhhhhhhhccCCc-cHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc
Q 004067 602 R---GLKFEASIKHNCGRI-DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG 677 (776)
Q Consensus 602 ~---~~~~~~~~~~~~~~~-~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~ 677 (776)
+ .... ... ..+++.+.+..+.++. +.++++++|||+||.+++.++.++|++++++++.+|.....
T Consensus 70 s~~~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~- 138 (207)
T 3bdi_A 70 SASSEKYG--------IDRGDLKHAAEFIRDYLKAN--GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES- 138 (207)
T ss_dssp SCCCTTTC--------CTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG-
T ss_pred cCcccCCC--------CCcchHHHHHHHHHHHHHHc--CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc-
Confidence 7 4321 122 4677777777777654 44699999999999999999999999999999998863211
Q ss_pred ccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCC
Q 004067 678 YDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR 757 (776)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 757 (776)
+ ...+.+++.|+++++|++|..+++.....+.+.+ .+.+++++++++|.+ .
T Consensus 139 ~------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~-~ 189 (207)
T 3bdi_A 139 L------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII----SGSRLEIVEGSGHPV-Y 189 (207)
T ss_dssp G------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHS----TTCEEEEETTCCSCH-H
T ss_pred h------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhc----CCceEEEeCCCCCCc-c
Confidence 0 2345677899999999999999998888887766 467899999999986 3
Q ss_pred CCcHHHHHHHHHHHHHH
Q 004067 758 HRDRIYMEERIWEFIER 774 (776)
Q Consensus 758 ~~~~~~~~~~~~~fl~~ 774 (776)
.+...++.+.+.+||++
T Consensus 190 ~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 190 IEKPEEFVRITVDFLRN 206 (207)
T ss_dssp HHSHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHhh
Confidence 34577888999999875
No 79
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.85 E-value=1.5e-20 Score=180.77 Aligned_cols=188 Identities=11% Similarity=0.076 Sum_probs=132.8
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
+..++||++||.+++.. .+..+++.|...|+.|++|+.+|+++++..+....... ....++..+.++.+.+
T Consensus 20 ~a~~~Vv~lHG~G~~~~-------~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~--~~~~~~~~~~i~~~~~ 90 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTAA-------DIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQN--QPALDSALALVGEVVA 90 (210)
T ss_dssp TCSEEEEEECCTTCCHH-------HHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGG--TTHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEeCCCCCHH-------HHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccc--hHHHHHHHHHHHHHHH
Confidence 45689999999655432 23345677778899999999998876544332222111 1123333344443332
Q ss_pred ---cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhcc
Q 004067 632 ---QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHK 708 (776)
Q Consensus 632 ---~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (776)
...+|.+||+|+|+|+||++++.+++++|+++++++++++..... ....... ....
T Consensus 91 ~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~--------------~~~~~~~-------~~~~ 149 (210)
T 4h0c_A 91 EIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQ--------------ELAIGNY-------KGDF 149 (210)
T ss_dssp HHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSS--------------SCCGGGC-------CBCC
T ss_pred HHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCCh--------------hhhhhhh-------hhhc
Confidence 245799999999999999999999999999999999988753210 0000000 0111
Q ss_pred CCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 709 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 709 i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
.+.|+|++||++|++||++.++++++.|++.+.++++++||+.+|.+. .+..+.+.+||.|
T Consensus 150 ~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~-----~~el~~i~~wL~k 210 (210)
T 4h0c_A 150 KQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS-----GDEIQLVNNTILK 210 (210)
T ss_dssp TTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC-----HHHHHHHHHTTTC
T ss_pred cCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC-----HHHHHHHHHHHcC
Confidence 246999999999999999999999999999999999999999999873 2335777888753
No 80
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.85 E-value=1.6e-20 Score=190.97 Aligned_cols=242 Identities=12% Similarity=0.065 Sum_probs=164.6
Q ss_pred CceEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 523 PPDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 523 ~~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
..+.+.+.+ ..|..+.+.+|.|++.. ..+++|+||++||+++... .|.. .....+.+++.||+|+++|.+++|.
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~~P~vv~lHG~~~~~~---~~~~-~~~~~~~~~~~g~~vv~~d~~~~g~ 88 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGAS-ESNKVPVLYWLSGLTCTDE---NFMQ-KAGAFKKAAELGIAIVAPDTSPRGD 88 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCB-TTBCEEEEEEECCTTCCSH---HHHH-HSCCHHHHHHHTCEEEECCSSCCST
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCC-CCCCcCEEEEeCCCCCChh---hhhc-chhHHHHHhhCCeEEEEeCCccccc
Confidence 345566765 46889999999998752 2368999999999876543 2321 1123566778899999999876553
Q ss_pred Cch-----------hhh-hhhhhcc-CCccHHH-HH-HHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEE
Q 004067 602 RGL-----------KFE-ASIKHNC-GRIDAED-QL-TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 666 (776)
Q Consensus 602 ~~~-----------~~~-~~~~~~~-~~~~~~D-~~-~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~ 666 (776)
+.. .+. ......+ ......+ +. +.+.++.+...+ .++++|+||||||++|+.++.++|++|+++
T Consensus 89 ~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~ 167 (280)
T 3ls2_A 89 NVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSA 167 (280)
T ss_dssp TSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCE
T ss_pred ccccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEE
Confidence 311 100 0000000 0011122 22 334455544433 479999999999999999999999999999
Q ss_pred EEcCCCCCcccccc--cccccccCCCCCCccchhcCChhhhhccCC----CcEEEEecCCCCccChHH-HHHHHHHHHHC
Q 004067 667 VSGAPVTSWDGYDT--FYTEKYMGLPSEDPVGYEYSSVMHHVHKMK----GKLLLVHGMIDENVHFRH-TARLINALVAA 739 (776)
Q Consensus 667 v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~P~lii~G~~D~~v~~~~-~~~~~~~l~~~ 739 (776)
++.+|..+...... .....+++. ....+...++...+.+++ .|+|++||+.|.+++.+. +.+++++|++.
T Consensus 168 ~~~s~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~ 244 (280)
T 3ls2_A 168 SAFSPIVNPINCPWGVKAFTGYLGA---DKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQK 244 (280)
T ss_dssp EEESCCSCGGGSHHHHHHHHHHHCS---CGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHH
T ss_pred EEecCccCcccCcchhhHHHhhcCc---hHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHh
Confidence 99999877543210 001122222 234455667777777775 499999999999999754 78999999999
Q ss_pred CCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 740 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 740 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+.+++++++|+++|.+. .........++|+.++|
T Consensus 245 g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l 278 (280)
T 3ls2_A 245 DYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYL 278 (280)
T ss_dssp TCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHh
Confidence 99999999999999863 34566778889998864
No 81
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.84 E-value=5.1e-20 Score=193.63 Aligned_cols=234 Identities=14% Similarity=0.077 Sum_probs=162.1
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCC-------------CCCCceEEEEEcCCCCcccccccccccchhhhHHHH-hCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRY-------------GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKG 588 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~-------------~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G 588 (776)
..+.+.+.. +..+.+.+|.|+.... ..++.|+||++|||+........ ..|..++..|+ +.|
T Consensus 71 ~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~--~~~~~~~~~la~~~g 146 (351)
T 2zsh_A 71 FSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANS--AIYDTLCRRLVGLCK 146 (351)
T ss_dssp EEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTB--HHHHHHHHHHHHHHT
T ss_pred eEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcc--hhHHHHHHHHHHHcC
Confidence 345566654 4458888999976410 22578999999997653221111 11344577787 789
Q ss_pred cEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC----CCCCC-cEEEEeechHHHHHHHHHhhCCC--
Q 004067 589 ILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG----LAKVG-HIGLYGWSYGGYLSAITLARFPD-- 661 (776)
Q Consensus 589 ~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~id~~-~i~l~G~S~GG~~a~~~a~~~~~-- 661 (776)
|.|+++|+||.+.+... ..++|+.++++++.++. .+|.+ +|+|+||||||.+|+.++.++++
T Consensus 147 ~~vv~~d~rg~~~~~~~-----------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~ 215 (351)
T 2zsh_A 147 CVVVSVNYRRAPENPYP-----------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESG 215 (351)
T ss_dssp SEEEEECCCCTTTSCTT-----------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTT
T ss_pred CEEEEecCCCCCCCCCc-----------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccC
Confidence 99999999997654321 23789999999998753 47888 99999999999999999998887
Q ss_pred -ceEEEEEcCCCCCccccccc-----------------ccccccCCCCCCccchhcCCh----hhhhccCCC-cEEEEec
Q 004067 662 -VFQCAVSGAPVTSWDGYDTF-----------------YTEKYMGLPSEDPVGYEYSSV----MHHVHKMKG-KLLLVHG 718 (776)
Q Consensus 662 -~~~~~v~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~-P~lii~G 718 (776)
.++++|+.+|..+....... +...+...... ......++ ...+.+++. |+|+++|
T Consensus 216 ~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~i~~pP~Lii~G 293 (351)
T 2zsh_A 216 IDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGED--REHPACNPFSPRGKSLEGVSFPKSLVVVA 293 (351)
T ss_dssp CCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCC--TTSTTTCTTSTTSCCCTTCCCCEEEEEEE
T ss_pred CCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCC--CCCcccCCCCCCccchhhCCCCCEEEEEc
Confidence 89999999998653211000 00011100000 00001111 123444555 9999999
Q ss_pred CCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCC---CCcHHHHHHHHHHHHHHh
Q 004067 719 MIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR---HRDRIYMEERIWEFIERT 775 (776)
Q Consensus 719 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~~fl~~~ 775 (776)
++|.+++ .+..+++++++.+.+++++++++++|.+.. .+...++.+.+.+||+++
T Consensus 294 ~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 294 GLDLIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp TTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred CCCcchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 9999876 567899999999999999999999998743 256788999999999764
No 82
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.84 E-value=2.2e-20 Score=193.08 Aligned_cols=229 Identities=14% Similarity=0.060 Sum_probs=164.5
Q ss_pred CCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHH-hCCcEEEEECCCCC
Q 004067 521 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGT 599 (776)
Q Consensus 521 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg~ 599 (776)
....+.++++..+|..+.+++|.|.. ++.|+||++|||+....... .+...+..++ +.||.|+++|||+.
T Consensus 57 ~~~~~~~~i~~~~G~~i~~~~~~P~~-----~~~p~vv~~HGgG~~~g~~~----~~~~~~~~la~~~g~~vv~~dyr~~ 127 (317)
T 3qh4_A 57 GVAVADDVVTGEAGRPVPVRIYRAAP-----TPAPVVVYCHAGGFALGNLD----TDHRQCLELARRARCAVVSVDYRLA 127 (317)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEECSC-----SSEEEEEEECCSTTTSCCTT----TTHHHHHHHHHHHTSEEEEECCCCT
T ss_pred cceEEEEEecCCCCCeEEEEEEecCC-----CCCcEEEEECCCcCccCChH----HHHHHHHHHHHHcCCEEEEecCCCC
Confidence 45678899999899899999999976 46799999999764322111 2333456666 56999999999977
Q ss_pred CCCchhhhhhhhhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhCCC----ceEEEEEcCCC
Q 004067 600 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPV 672 (776)
Q Consensus 600 g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~~~----~~~~~v~~~~~ 672 (776)
++... ....+|+.++++++.++ ..+|.++|+|+|+|+||.+|+.++.++++ .+++.++.+|+
T Consensus 128 p~~~~-----------p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~ 196 (317)
T 3qh4_A 128 PEHPY-----------PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPV 196 (317)
T ss_dssp TTSCT-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCC
T ss_pred CCCCC-----------chHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECce
Confidence 65431 12377899999999886 45788899999999999999999987544 48999999998
Q ss_pred CCccccccc----------------ccccccCCCCCCccchhcCChhhhhccCC--CcEEEEecCCCCccChHHHHHHHH
Q 004067 673 TSWDGYDTF----------------YTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLIN 734 (776)
Q Consensus 673 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~v~~~~~~~~~~ 734 (776)
.+....... +...+++.... ....++.. ...+. .|+|+++|+.|.+++ ++..+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~-~~~l~~lpP~li~~G~~D~~~~--~~~~~a~ 269 (317)
T 3qh4_A 197 LDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTP----SPESVPGR-RGQLAGLPATLITCGEIDPFRD--EVLDYAQ 269 (317)
T ss_dssp CCSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCC----CTTTCGGG-CSCCTTCCCEEEEEEEESTTHH--HHHHHHH
T ss_pred ecCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCC----CcccCCCc-ccccCCCCceeEEecCcCCCch--hHHHHHH
Confidence 876411000 00111111100 00111211 12222 499999999999865 6788999
Q ss_pred HHHHCCCCeEEEEecCCCCCCC----CCCcHHHHHHHHHHHHHHhC
Q 004067 735 ALVAARKPYEILIFPDERHMPR----RHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 735 ~l~~~~~~~~~~~~~~~~H~~~----~~~~~~~~~~~~~~fl~~~l 776 (776)
++++.+.++++++|++++|.+. ..+...++.+.+.+||+++|
T Consensus 270 ~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l 315 (317)
T 3qh4_A 270 RLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAF 315 (317)
T ss_dssp HHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999862 23456889999999999874
No 83
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.84 E-value=3.8e-20 Score=186.19 Aligned_cols=217 Identities=16% Similarity=0.067 Sum_probs=155.9
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+...++..++..+.+.+|.|.. ++.|+||++||++....... .|..++..|+++||.|+++|+||++...
T Consensus 38 ~~~~~i~~~~~~~~~~~~~~p~~-----~~~p~vv~~HGgg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~~~~~~~~ 108 (262)
T 2pbl_A 38 RARLNLSYGEGDRHKFDLFLPEG-----TPVGLFVFVHGGYWMAFDKS----SWSHLAVGALSKGWAVAMPSYELCPEVR 108 (262)
T ss_dssp GEEEEEESSSSTTCEEEEECCSS-----SCSEEEEEECCSTTTSCCGG----GCGGGGHHHHHTTEEEEEECCCCTTTSC
T ss_pred CCccccccCCCCCceEEEEccCC-----CCCCEEEEEcCcccccCChH----HHHHHHHHHHhCCCEEEEeCCCCCCCCC
Confidence 44556666667668888888865 36799999999652211111 3345678899999999999999887532
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC------CCceEEEEEcCCCCCccc
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF------PDVFQCAVSGAPVTSWDG 677 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~------~~~~~~~v~~~~~~~~~~ 677 (776)
. . ...+|+.++++++..+.. ++++|+||||||.+++.++.++ +++++++++.+|..++..
T Consensus 109 ~-------~----~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~ 174 (262)
T 2pbl_A 109 I-------S----EITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRP 174 (262)
T ss_dssp H-------H----HHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGG
T ss_pred h-------H----HHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchH
Confidence 1 1 126789999999987643 6999999999999999999987 889999999999877543
Q ss_pred ccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCC
Q 004067 678 YDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR 757 (776)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 757 (776)
....+....+. .....+...++...+.++++|+|+++|++|..+++..+..+++.+. ++++++++++|.+.
T Consensus 175 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~- 245 (262)
T 2pbl_A 175 LLRTSMNEKFK---MDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFNV- 245 (262)
T ss_dssp GGGSTTHHHHC---CCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTTT-
T ss_pred HHhhhhhhhhC---CCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcchH-
Confidence 32211111111 1223344556666777888999999999999999999999999884 79999999999763
Q ss_pred CCcHHHHHHHHHHHH
Q 004067 758 HRDRIYMEERIWEFI 772 (776)
Q Consensus 758 ~~~~~~~~~~~~~fl 772 (776)
.+........+.+++
T Consensus 246 ~~~~~~~~~~l~~~l 260 (262)
T 2pbl_A 246 IEPLADPESDLVAVI 260 (262)
T ss_dssp TGGGGCTTCHHHHHH
T ss_pred HhhcCCCCcHHHHHH
Confidence 333333334444444
No 84
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.84 E-value=6.4e-20 Score=187.93 Aligned_cols=213 Identities=15% Similarity=0.123 Sum_probs=140.4
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCC-CCC
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARR 602 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~-g~~ 602 (776)
++...+.+.+|..++++.+.|... .+++.|+||++||.+++.. .|..++..|+++||.|+++|+||| |.|
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~--~~~~~~~VvllHG~g~~~~-------~~~~~~~~L~~~G~~Vi~~D~rGh~G~S 77 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKEN--VPFKNNTILIASGFARRMD-------HFAGLAEYLSTNGFHVFRYDSLHHVGLS 77 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT--SCCCSCEEEEECTTCGGGG-------GGHHHHHHHHTTTCCEEEECCCBCC---
T ss_pred ceEEEEEcCCCCEEEEEEecCccc--CCCCCCEEEEecCCccCch-------HHHHHHHHHHHCCCEEEEeeCCCCCCCC
Confidence 566778888999999999988642 1134589999999766543 345568889999999999999998 877
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-cc
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-TF 681 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-~~ 681 (776)
.......... ...+|+.++++++.+. +..+++++||||||++|+.+|.+ | +++++|+.++...+.... ..
T Consensus 78 ~~~~~~~~~~----~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~ 148 (305)
T 1tht_A 78 SGSIDEFTMT----TGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKA 148 (305)
T ss_dssp -----CCCHH----HHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHH
T ss_pred CCcccceehH----HHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHH
Confidence 5321110000 1256778888888743 34689999999999999999998 6 788888887765432110 00
Q ss_pred cccccc-----CCCCC----C----ccchh----cC------ChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHH
Q 004067 682 YTEKYM-----GLPSE----D----PVGYE----YS------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 738 (776)
Q Consensus 682 ~~~~~~-----~~~~~----~----~~~~~----~~------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 738 (776)
+...+. ..+.. . ...+. .. +....+.++++|+|+++|++|..+|+..+..+++.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~- 227 (305)
T 1tht_A 149 LGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIR- 227 (305)
T ss_dssp HSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCT-
T ss_pred hhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcC-
Confidence 000000 00000 0 00000 00 1234577899999999999999999988887776542
Q ss_pred CCCCeEEEEecCCCCCCC
Q 004067 739 ARKPYEILIFPDERHMPR 756 (776)
Q Consensus 739 ~~~~~~~~~~~~~~H~~~ 756 (776)
..+.++++++++||.+.
T Consensus 228 -~~~~~l~~i~~agH~~~ 244 (305)
T 1tht_A 228 -TGHCKLYSLLGSSHDLG 244 (305)
T ss_dssp -TCCEEEEEETTCCSCTT
T ss_pred -CCCcEEEEeCCCCCchh
Confidence 24689999999999873
No 85
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.84 E-value=4.9e-20 Score=194.23 Aligned_cols=233 Identities=14% Similarity=0.045 Sum_probs=164.2
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+.+.+...+|..+.+++|.|.... ++.|+||++||++....... ...+..++..|++.||+|+++|+||+|++.
T Consensus 82 ~~~~~~~~~~g~~l~~~v~~p~~~~---~~~p~vv~iHGgg~~~g~~~--~~~~~~~~~~la~~g~~vv~~d~r~~gg~~ 156 (361)
T 1jkm_A 82 TSTETILGVDGNEITLHVFRPAGVE---GVLPGLVYTHGGGMTILTTD--NRVHRRWCTDLAAAGSVVVMVDFRNAWTAE 156 (361)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCC---SCEEEEEEECCSTTTSSCSS--SHHHHHHHHHHHHTTCEEEEEECCCSEETT
T ss_pred eeeeeeecCCCCeEEEEEEeCCCCC---CCCeEEEEEcCCccccCCCc--ccchhHHHHHHHhCCCEEEEEecCCCCCCC
Confidence 4567788888878999999997641 37899999999763211111 002334577888899999999999997553
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcC---CCCCCcEEEEeechHHHHHHHHHhh-----CCCceEEEEEcCCCCCc
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLAR-----FPDVFQCAVSGAPVTSW 675 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~-----~~~~~~~~v~~~~~~~~ 675 (776)
.. ........|+..+++++.++. .++ +|+|+|||+||.+++.++.. +|+.++++|+.+|..+.
T Consensus 157 ~~-------~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 157 GH-------HPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227 (361)
T ss_dssp EE-------CCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred CC-------CCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccc
Confidence 11 112234789999999998762 334 99999999999999999988 78789999999998765
Q ss_pred c---------cccccc----------------cccccCCCCCCccchhcCChh----hhhccCCCcEEEEecCCCCccCh
Q 004067 676 D---------GYDTFY----------------TEKYMGLPSEDPVGYEYSSVM----HHVHKMKGKLLLVHGMIDENVHF 726 (776)
Q Consensus 676 ~---------~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~P~lii~G~~D~~v~~ 726 (776)
. .....+ ...+........ ....++. ..+.++. |+|+++|++|..++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~- 303 (361)
T 1jkm_A 228 GYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAE--DPIAWPYFASEDELRGLP-PFVVAVNELDPLRD- 303 (361)
T ss_dssp CTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTT--CTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH-
T ss_pred ccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCC--CcccCccccChhhHcCCC-ceEEEEcCcCcchh-
Confidence 1 100000 011111111000 0011222 3455665 99999999999887
Q ss_pred HHHHHHHHHHHHCCCCeEEEEecCCCCCCC-C----CCcH-HHHHHHHHHHHHHh
Q 004067 727 RHTARLINALVAARKPYEILIFPDERHMPR-R----HRDR-IYMEERIWEFIERT 775 (776)
Q Consensus 727 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~-~----~~~~-~~~~~~~~~fl~~~ 775 (776)
.+..+++++.+.+.+++++++++++|.+. . .... .++.+.+.+||+++
T Consensus 304 -~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 304 -EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 357 (361)
T ss_dssp -HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHh
Confidence 78899999999999999999999999874 2 1233 77889999999875
No 86
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.84 E-value=1.4e-19 Score=182.95 Aligned_cols=205 Identities=17% Similarity=0.164 Sum_probs=146.8
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
+.|+||++||.++... .|..++..|+++||.|+++|+||+|.+........... ..+|+.++++++..+
T Consensus 39 ~~~~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~----~~~d~~~~i~~l~~~ 107 (270)
T 3rm3_A 39 GPVGVLLVHGFTGTPH-------SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHD----WVASVEEGYGWLKQR 107 (270)
T ss_dssp SSEEEEEECCTTCCGG-------GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHH----HHHHHHHHHHHHHTT
T ss_pred CCeEEEEECCCCCChh-------HHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHH----HHHHHHHHHHHHHhh
Confidence 3489999999776543 24556888999999999999999998865332211111 266788888888765
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc---------ccccccC---CCCCCccchhcC
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF---------YTEKYMG---LPSEDPVGYEYS 700 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~ 700 (776)
..+++++|||+||.+++.++.++|+ ++++|+.+|.......... +...+.. .+......+...
T Consensus 108 ----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (270)
T 3rm3_A 108 ----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKT 182 (270)
T ss_dssp ----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEE
T ss_pred ----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhccccc
Confidence 4699999999999999999999999 9999999987654321110 0011000 000000001000
Q ss_pred -------------ChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHH
Q 004067 701 -------------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEER 767 (776)
Q Consensus 701 -------------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 767 (776)
+....+.++++|+|+++|++|..+++..+..+++.+. +.+++++++++++|.+.......++.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 260 (270)
T 3rm3_A 183 PTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGIS--STEKEIVRLRNSYHVATLDYDQPMIIER 260 (270)
T ss_dssp EHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSC--CSSEEEEEESSCCSCGGGSTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcC--CCcceEEEeCCCCcccccCccHHHHHHH
Confidence 1223567888999999999999999999998888773 3467999999999988555456889999
Q ss_pred HHHHHHHh
Q 004067 768 IWEFIERT 775 (776)
Q Consensus 768 ~~~fl~~~ 775 (776)
+.+||+++
T Consensus 261 i~~fl~~~ 268 (270)
T 3rm3_A 261 SLEFFAKH 268 (270)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999876
No 87
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.84 E-value=1.5e-19 Score=186.91 Aligned_cols=232 Identities=16% Similarity=0.159 Sum_probs=155.8
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
..+.+.+.. +|..+....+.+.... ++.|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~p~vv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~s 87 (315)
T 4f0j_A 19 PVHYLDFTS-QGQPLSMAYLDVAPKK---ANGRTILLMHGKNFCAG-------TWERTIDVLADAGYRVIAVDQVGFCKS 87 (315)
T ss_dssp CCEEEEEEE-TTEEEEEEEEEECCSS---CCSCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred cceeEEEec-CCCCeeEEEeecCCCC---CCCCeEEEEcCCCCcch-------HHHHHHHHHHHCCCeEEEeecCCCCCC
Confidence 466677776 5544544444332211 45689999999876644 345568889999999999999999988
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc-----
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG----- 677 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~----- 677 (776)
..... .....+++.+.+..+++.. +.++++|+|||+||.+++.++.++|++++++++.+|......
T Consensus 88 ~~~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 158 (315)
T 4f0j_A 88 SKPAH-------YQYSFQQLAANTHALLERL--GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGV 158 (315)
T ss_dssp CCCSS-------CCCCHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTC
T ss_pred CCCCc-------cccCHHHHHHHHHHHHHHh--CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccc
Confidence 64321 2345777777777777664 446999999999999999999999999999999988642110
Q ss_pred ----cccc---------------ccccccCCCCC-Cc---------------------------cchhcCChhhhhccCC
Q 004067 678 ----YDTF---------------YTEKYMGLPSE-DP---------------------------VGYEYSSVMHHVHKMK 710 (776)
Q Consensus 678 ----~~~~---------------~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~~~i~ 710 (776)
.... ....+...... .. ......+....+.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (315)
T 4f0j_A 159 PWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQ 238 (315)
T ss_dssp CCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCC
T ss_pred hhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCC
Confidence 0000 00000000000 00 0001122334577889
Q ss_pred CcEEEEecCCCCccChHHH------------HHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 711 GKLLLVHGMIDENVHFRHT------------ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 711 ~P~lii~G~~D~~v~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+|+|+++|++|..+|.... .+..+.+.+...++++++++++||.+ ..+..+++.+.+.+||+++
T Consensus 239 ~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 239 MPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTP-QIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp SCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCH-HHHSHHHHHHHHHHHHCC-
T ss_pred CCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcch-hhhCHHHHHHHHHHHhccC
Confidence 9999999999999994332 33444444445788999999999986 5567888999999999753
No 88
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.84 E-value=2e-19 Score=181.46 Aligned_cols=220 Identities=12% Similarity=0.027 Sum_probs=154.1
Q ss_pred CCCceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCccccccccccc---chhhhHHHHhC----CcEEE
Q 004067 521 LEPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINT---VDMRAQYLRSK----GILVW 592 (776)
Q Consensus 521 ~~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~---~~~~~~~l~~~----G~~v~ 592 (776)
....+.+.+.+. +|..+.+++|.|++.. ..+++|+||++||+++... .|... +..+++.|++. ||.|+
T Consensus 29 ~g~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~~P~vv~lHG~g~~~~---~~~~~~~~~~~~~~~l~~~g~~~~~~vv 104 (268)
T 1jjf_A 29 RGQVVNISYFSTATNSTRPARVYLPPGYS-KDKKYSVLYLLHGIGGSEN---DWFEGGGRANVIADNLIAEGKIKPLIIV 104 (268)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEECTTCC-TTSCBCEEEEECCTTCCTT---TTTTTTTCHHHHHHHHHHTTSSCCCEEE
T ss_pred CceEEEEEEeccccCCceEEEEEeCCCCC-CCCCccEEEEECCCCCCcc---hhhhccccHHHHHHHHHHcCCCCCEEEE
Confidence 445667778764 6788999999998752 2368999999999876543 33221 23345667665 59999
Q ss_pred EECCCCCCCCchhhhhhhhhccCCccHHH-HHHHHHHHHHcCCC--CCCcEEEEeechHHHHHHHHHhhCCCceEEEEEc
Q 004067 593 KLDNRGTARRGLKFEASIKHNCGRIDAED-QLTGAEWLIKQGLA--KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSG 669 (776)
Q Consensus 593 ~~d~rg~g~~~~~~~~~~~~~~~~~~~~D-~~~~i~~l~~~~~i--d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~ 669 (776)
++|+++.+....... .. ...+ +..++.++.++..+ |.++++|+||||||++++.++.++|++|+++++.
T Consensus 105 ~~d~~~~~~~~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 176 (268)
T 1jjf_A 105 TPNTNAAGPGIADGY----EN----FTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPI 176 (268)
T ss_dssp EECCCCCCTTCSCHH----HH----HHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEE
T ss_pred EeCCCCCCccccccH----HH----HHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEe
Confidence 999998754321100 00 0223 44556666665444 7899999999999999999999999999999999
Q ss_pred CCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCC-cEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEe
Q 004067 670 APVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 748 (776)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 748 (776)
+|..++......+ ... . .....+. |+|++||+.|..++. +..+++.+++.+.+++++++
T Consensus 177 s~~~~~~~~~~~~-----~~~----------~---~~~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~ 236 (268)
T 1jjf_A 177 SAAPNTYPNERLF-----PDG----------G---KAAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVYWLI 236 (268)
T ss_dssp SCCTTSCCHHHHC-----TTT----------T---HHHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEE
T ss_pred CCCCCCCchhhhc-----Ccc----------h---hhhhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCceEEEEc
Confidence 9976543211111 000 0 0111223 599999999999874 67899999999999999999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 749 PDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 749 ~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
++++|.+. .....+..+.+||.++
T Consensus 237 ~g~~H~~~---~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 237 QGGGHDFN---VWKPGLWNFLQMADEA 260 (268)
T ss_dssp TTCCSSHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCcCHh---HHHHHHHHHHHHHHhc
Confidence 99999863 2445667888898765
No 89
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.83 E-value=2.4e-19 Score=181.68 Aligned_cols=218 Identities=18% Similarity=0.183 Sum_probs=144.5
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhh
Q 004067 529 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 608 (776)
Q Consensus 529 ~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~ 608 (776)
+++.+|.++++..+.|++ .|+||++||.+++.. .|...+..|+++||.|+++|+||+|.|.....
T Consensus 3 ~~~~~g~~l~y~~~g~~~-------~~~vvllHG~~~~~~-------~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~- 67 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD-------GLPVVFHHGWPLSAD-------DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST- 67 (275)
T ss_dssp EECTTSCEEEEEEESCTT-------SCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-
T ss_pred EEccCCCEEEEEEcCCCC-------CceEEEECCCCCchh-------hHHHHHHHHHHCCceEEEEcCCcCCCCCCCCC-
Confidence 566789999988886533 267999999776543 34556788999999999999999998864311
Q ss_pred hhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-CCceEEEEEcCCCCCccc--------cc
Q 004067 609 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG--------YD 679 (776)
Q Consensus 609 ~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-~~~~~~~v~~~~~~~~~~--------~~ 679 (776)
...++++.+.+..+++.- +.+++.++||||||.+++.+++++ |++++++|+.++...... ..
T Consensus 68 -------~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 138 (275)
T 1a88_A 68 -------GHDMDTYAADVAALTEAL--DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLP 138 (275)
T ss_dssp -------CCSHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBC
T ss_pred -------CCCHHHHHHHHHHHHHHc--CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCC
Confidence 123444444444443332 345899999999999999988776 999999998876432100 00
Q ss_pred -c---------------ccc---c-cccCCC--C--CCcc---c-------------------hhcCChhhhhccCCCcE
Q 004067 680 -T---------------FYT---E-KYMGLP--S--EDPV---G-------------------YEYSSVMHHVHKMKGKL 713 (776)
Q Consensus 680 -~---------------~~~---~-~~~~~~--~--~~~~---~-------------------~~~~~~~~~~~~i~~P~ 713 (776)
. .+. . .+.+.. . .... . +...+....+.++++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 218 (275)
T 1a88_A 139 LEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPV 218 (275)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCE
T ss_pred HHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCE
Confidence 0 000 0 011100 0 0000 0 00112223467889999
Q ss_pred EEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 714 LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 714 lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
|+++|++|..+|+....+.+..+ ..+.++++++++||.+ ..+.++++.+.+.+||.+
T Consensus 219 lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 219 LVAHGTDDQVVPYADAAPKSAEL---LANATLKSYEGLPHGM-LSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHH---STTEEEEEETTCCTTH-HHHCHHHHHHHHHHHHHC
T ss_pred EEEecCCCccCCcHHHHHHHHhh---CCCcEEEEcCCCCccH-HHhCHHHHHHHHHHHhhC
Confidence 99999999999987544444333 3578999999999987 456788999999999863
No 90
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.83 E-value=2.8e-20 Score=185.44 Aligned_cols=206 Identities=15% Similarity=0.152 Sum_probs=148.8
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchh-hhhh-hhhccCCccHHHHHHHHHHHH
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK-FEAS-IKHNCGRIDAEDQLTGAEWLI 630 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~-~~~~-~~~~~~~~~~~D~~~~i~~l~ 630 (776)
+.|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+... .... .... ..+|+.++++++.
T Consensus 21 ~~~~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~----~~~d~~~~i~~l~ 89 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPN-------DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDI----WWAESSAAVAHMT 89 (251)
T ss_dssp SSEEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHH----HHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCHH-------HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHH----HHHHHHHHHHHHH
Confidence 4578999999776644 345568889999999999999999988432 2211 1111 2578888888887
Q ss_pred HcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc----ccccccc---cCCCCCCccchh-----
Q 004067 631 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----TFYTEKY---MGLPSEDPVGYE----- 698 (776)
Q Consensus 631 ~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~----- 698 (776)
.+ .++++++||||||++++.++.++|++++++++.+|........ ..+.... ..... ....+.
T Consensus 90 ~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 164 (251)
T 3dkr_A 90 AK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSD-ESTQILAYLPG 164 (251)
T ss_dssp TT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHH
T ss_pred Hh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCc-chhhHHhhhHH
Confidence 65 4699999999999999999999999999999999886632110 0000000 00000 000000
Q ss_pred --------cCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHH
Q 004067 699 --------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWE 770 (776)
Q Consensus 699 --------~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 770 (776)
.......+.++++|+|+++|++|..+++..+..+++.+... .+++++++++++|.+.......++.+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 243 (251)
T 3dkr_A 165 QLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIA 243 (251)
T ss_dssp HHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHHHHHHH
Confidence 00123456778899999999999999999999998888543 567999999999988655568999999999
Q ss_pred HHHHh
Q 004067 771 FIERT 775 (776)
Q Consensus 771 fl~~~ 775 (776)
||++.
T Consensus 244 fl~~~ 248 (251)
T 3dkr_A 244 FMQQE 248 (251)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99864
No 91
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.83 E-value=5.9e-20 Score=181.55 Aligned_cols=215 Identities=15% Similarity=0.001 Sum_probs=150.2
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhh-
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI- 610 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~- 610 (776)
.+| +..+.+.|.+ +.|+||++||.+++.. .+..++..|+++||.|+++|+||+|.+........
T Consensus 10 ~~g--~~~~~~~~~~------~~~~vv~~hG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~ 74 (238)
T 1ufo_A 10 LAG--LSVLARIPEA------PKALLLALHGLQGSKE-------HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKS 74 (238)
T ss_dssp ETT--EEEEEEEESS------CCEEEEEECCTTCCHH-------HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTS
T ss_pred cCC--EEEEEEecCC------CccEEEEECCCcccch-------HHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccc
Confidence 355 4445666654 4589999999876543 23345677888899999999999998754221100
Q ss_pred ------hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccc
Q 004067 611 ------KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE 684 (776)
Q Consensus 611 ------~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 684 (776)
.........+|+.++++++.+... .+++++|||+||.+++.++.++|+.+.++++.++..........
T Consensus 75 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~--- 148 (238)
T 1ufo_A 75 PRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQ--- 148 (238)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTC---
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhh---
Confidence 000001236688888888876542 69999999999999999999999998888888765432111100
Q ss_pred cccCCCCCCccchhcCChhhhhccC-CCcEEEEecCCCCccChHHHHHHHHHHH-HCCC-CeEEEEecCCCCCCCCCCcH
Q 004067 685 KYMGLPSEDPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALV-AARK-PYEILIFPDERHMPRRHRDR 761 (776)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~l~-~~~~-~~~~~~~~~~~H~~~~~~~~ 761 (776)
...|.. ...+...++...+.++ ++|+|+++|++|..+++..+.++++.+. +.+. +++++++++++|.+. .
T Consensus 149 --~~~~~~-~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~-~--- 221 (238)
T 1ufo_A 149 --VVEDPG-VLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLT-P--- 221 (238)
T ss_dssp --CCCCHH-HHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCC-H---
T ss_pred --ccCCcc-cchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccH-H---
Confidence 011110 1223344555667777 8999999999999999999999999998 7766 899999999999873 2
Q ss_pred HHHHHHHHHHHHHh
Q 004067 762 IYMEERIWEFIERT 775 (776)
Q Consensus 762 ~~~~~~~~~fl~~~ 775 (776)
+..+.+.+||.++
T Consensus 222 -~~~~~~~~~l~~~ 234 (238)
T 1ufo_A 222 -LMARVGLAFLEHW 234 (238)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHH
Confidence 3456677777665
No 92
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=2.5e-18 Score=175.75 Aligned_cols=262 Identities=14% Similarity=0.085 Sum_probs=185.6
Q ss_pred CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCC-CceeEEeeCCCCCceecCCcccceec
Q 004067 147 PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLI-NEQRQLTHGANGNTVTHGLAEYIAQE 225 (776)
Q Consensus 147 ~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~-g~~~~lt~~~~~~~~~~~~~~~~~~~ 225 (776)
++.|++||+.+++.+ .+..... .+..+.|||||+.|++..++.|+++++++ ++.+++......
T Consensus 21 ~~~i~~~d~~~~~~~-~~~~~~~-~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------------- 84 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMR-VVWQTPE-LFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT-------------- 84 (297)
T ss_dssp CEEEEEEETTTTEEE-EEEEESS-CCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC--------------
T ss_pred ceeEEEEeCCCCcee-eeccCCc-ceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc--------------
Confidence 467999999999887 5554443 47889999999999999999999999999 887776543211
Q ss_pred ccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccC
Q 004067 226 EMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCG 305 (776)
Q Consensus 226 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~ 305 (776)
..+..+.|||||+.|++...+.. ....|+.++.++++...+..
T Consensus 85 --~~~~~~~~spdg~~l~~~~~~~~--------------------------------~~~~l~~~~~~~~~~~~~~~--- 127 (297)
T 2ojh_A 85 --ICNNDHGISPDGALYAISDKVEF--------------------------------GKSAIYLLPSTGGTPRLMTK--- 127 (297)
T ss_dssp --CBCSCCEECTTSSEEEEEECTTT--------------------------------SSCEEEEEETTCCCCEECCS---
T ss_pred --ccccceEECCCCCEEEEEEeCCC--------------------------------CcceEEEEECCCCceEEeec---
Confidence 01346789999999999874321 11568999998888766632
Q ss_pred CCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEE
Q 004067 306 GTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIW 385 (776)
Q Consensus 306 ~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (776)
.. .+..+.|||||+.+++..... ....||.++++++..+.+..+..... ...|+| ++..+++
T Consensus 128 ------~~-~~~~~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~s~-------dg~~l~~ 189 (297)
T 2ojh_A 128 ------NL-PSYWHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGVETRLTHGEGRND---GPDYSP-------DGRWIYF 189 (297)
T ss_dssp ------SS-SEEEEEECTTSSEEEEEEEET-TEEEEEEEETTTCCEEECCCSSSCEE---EEEECT-------TSSEEEE
T ss_pred ------CC-CccceEECCCCCEEEEEECCC-CceEEEEEECCCCcceEcccCCCccc---cceECC-------CCCEEEE
Confidence 22 267789999999888766554 45678999998888776655432211 112222 2334666
Q ss_pred EeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCC------ceeeEEEEEeCCCCCCccccce
Q 004067 386 ASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP------LESHLYCAKLYPDWNHTLEAPV 459 (776)
Q Consensus 386 ~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~------~~~~l~~~~~~~~g~~~~~~~~ 459 (776)
.+..++...||.++++++..+.++.+...+..+ .|+|||++|++.+..... ....|+.+++. +. ...
T Consensus 190 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~--~~----~~~ 262 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGSSVERITDSAYGDWFP-HPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD--GG----NVE 262 (297)
T ss_dssp EECTTSSCEEEEEETTSSCEEECCCCSEEEEEE-EECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT--SC----SCE
T ss_pred EecCCCCccEEEECCCCCCcEEEecCCcccCCe-EECCCCCEEEEEEcCCCCCcccccCceEEEEEecC--CC----Cce
Confidence 676678889999998888888888776655555 499999999988765321 23578888873 32 233
Q ss_pred eec---CC-CCeEEEEEcCCcCEEEEEeeCC
Q 004067 460 KLT---NG-KGKHVAVLDHNMRNFVDFHDSL 486 (776)
Q Consensus 460 ~l~---~~-~~~~~~~~spdg~~l~~~~~~~ 486 (776)
.+. .+ ..+..+.|+|||++|++.....
T Consensus 263 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 263 TLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred eeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 332 22 2355689999999999987654
No 93
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.83 E-value=1.7e-19 Score=177.58 Aligned_cols=194 Identities=17% Similarity=0.044 Sum_probs=140.4
Q ss_pred EEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEE-------------------CCCCCCC
Q 004067 541 LYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKL-------------------DNRGTAR 601 (776)
Q Consensus 541 ~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~-------------------d~rg~g~ 601 (776)
++.|+.. ++.|+||++||.+++.. .|..++..|++.||.|+++ |++|+ .
T Consensus 14 ~~~p~~~----~~~~~vv~lHG~~~~~~-------~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~ 81 (232)
T 1fj2_A 14 AIVPAAR----KATAAVIFLHGLGDTGH-------GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-S 81 (232)
T ss_dssp EEECCSS----CCSEEEEEECCSSSCHH-------HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-S
T ss_pred cccCCCC----CCCceEEEEecCCCccc-------hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-C
Confidence 4455443 46799999999876543 2344566677789999998 55555 2
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 681 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~ 681 (776)
+.......... ...+|+.+.++.+.+ ..++.++++++|||+||.+++.++.++|+.++++++.+|.......
T Consensus 82 ~~~~~~~~~~~----~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~--- 153 (232)
T 1fj2_A 82 PDSQEDESGIK----QAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS--- 153 (232)
T ss_dssp TTCCBCHHHHH----HHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG---
T ss_pred cccccccHHHH----HHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc---
Confidence 21111111111 125567777777766 5567789999999999999999999999999999999987643211
Q ss_pred ccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCC--eEEEEecCCCCCCCCCC
Q 004067 682 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP--YEILIFPDERHMPRRHR 759 (776)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~ 759 (776)
+ +. .......++.|+|+++|++|..+++..+.++++.+.+.+.. ++++++++++|.+
T Consensus 154 ----~---~~----------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~---- 212 (232)
T 1fj2_A 154 ----F---PQ----------GPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSS---- 212 (232)
T ss_dssp ----S---CS----------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSC----
T ss_pred ----c---cc----------cccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCccc----
Confidence 0 00 01124567789999999999999999999999999888754 9999999999987
Q ss_pred cHHHHHHHHHHHHHHhC
Q 004067 760 DRIYMEERIWEFIERTL 776 (776)
Q Consensus 760 ~~~~~~~~~~~fl~~~l 776 (776)
..+..+.+.+||+++|
T Consensus 213 -~~~~~~~i~~~l~~~l 228 (232)
T 1fj2_A 213 -CQQEMMDVKQFIDKLL 228 (232)
T ss_dssp -CHHHHHHHHHHHHHHS
T ss_pred -CHHHHHHHHHHHHHhc
Confidence 2334589999998875
No 94
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.83 E-value=5.9e-20 Score=185.76 Aligned_cols=216 Identities=22% Similarity=0.258 Sum_probs=141.9
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhh
Q 004067 528 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 607 (776)
Q Consensus 528 ~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~ 607 (776)
++.+.||.++++..+.. .|.||++||.+++.. .|...+..|+++||.|+++|+||+|.|.....
T Consensus 2 ~~~~~~g~~l~y~~~G~---------g~~vvllHG~~~~~~-------~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~ 65 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGS---------GKPVLFSHGWLLDAD-------MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65 (271)
T ss_dssp EEECTTSCEEEEEEESS---------SSEEEEECCTTCCGG-------GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSS
T ss_pred eEEcCCCCEEEEEccCC---------CCeEEEECCCCCcHH-------HHHHHHHHHHhCCceEEEecCCCCccCCCCCC
Confidence 36677999998887741 146889999876643 34556778888999999999999998864321
Q ss_pred hhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhh-CCCceEEEEEcCCCCCcccccc------
Q 004067 608 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDGYDT------ 680 (776)
Q Consensus 608 ~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~-~~~~~~~~v~~~~~~~~~~~~~------ 680 (776)
...++++.+.+..+++.. +.+++.++||||||++++.+++. .|++++++++.++.........
T Consensus 66 --------~~~~~~~a~d~~~~l~~l--~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 135 (271)
T 3ia2_A 66 --------GNDYDTFADDIAQLIEHL--DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGV 135 (271)
T ss_dssp --------CCSHHHHHHHHHHHHHHH--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSB
T ss_pred --------CCCHHHHHHHHHHHHHHh--CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccc
Confidence 122334444333333322 34689999999999877666655 4899999998876532110000
Q ss_pred -------c--------------ccccccCCC---CCCc----------------------cchhcCChhhhhccCCCcEE
Q 004067 681 -------F--------------YTEKYMGLP---SEDP----------------------VGYEYSSVMHHVHKMKGKLL 714 (776)
Q Consensus 681 -------~--------------~~~~~~~~~---~~~~----------------------~~~~~~~~~~~~~~i~~P~l 714 (776)
. +...+.... .... ..+...+....+.++++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 215 (271)
T 3ia2_A 136 PLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTL 215 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEE
T ss_pred cHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEE
Confidence 0 000000000 0000 00011122334678899999
Q ss_pred EEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 715 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 715 ii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
+++|++|.++|+..+.++...+ ..+.++.+++++||.+ ..+.++++.+.+.+||.
T Consensus 216 vi~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 216 VIHGDGDQIVPFETTGKVAAEL---IKGAELKVYKDAPHGF-AVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp EEEETTCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTH-HHHTHHHHHHHHHHHHT
T ss_pred EEEeCCCCcCChHHHHHHHHHh---CCCceEEEEcCCCCcc-cccCHHHHHHHHHHHhh
Confidence 9999999999998765555544 3567999999999987 56778899999999985
No 95
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.83 E-value=1.4e-19 Score=206.60 Aligned_cols=235 Identities=14% Similarity=0.138 Sum_probs=165.8
Q ss_pred EcCCCcE--EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccc--------------------------------------
Q 004067 530 QANDGTV--LYGALYKPDESRYGPPPYKTLISVYGGPCVQLV-------------------------------------- 569 (776)
Q Consensus 530 ~~~dg~~--l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~-------------------------------------- 569 (776)
+..||.+ |.+.+|+|++. +++|+||..|+.......
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~----~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 254 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST----EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKE 254 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS----SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCCC----CcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccc
Confidence 4579998 99999999874 589999988875432100
Q ss_pred -------ccccccc-chhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC--------
Q 004067 570 -------CDSWINT-VDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG-------- 633 (776)
Q Consensus 570 -------~~~~~~~-~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-------- 633 (776)
...|... .....++|+++||+|+++|+||+|.|+..+. .++..+.+|+.++++|+..+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~-----~~~~~e~~D~~a~IdwL~~~~~~~~d~~~ 329 (763)
T 1lns_A 255 LPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQT-----SGDYQQIYSMTAVIDWLNGRARAYTSRKK 329 (763)
T ss_dssp CCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCC-----TTSHHHHHHHHHHHHHHTTSSCEESSTTC
T ss_pred ccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCC-----CCCHHHHHHHHHHHHHHhhcccccccccc
Confidence 0011000 0123578999999999999999998865421 222245789999999998531
Q ss_pred ------CCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-c--------cccc------------cc
Q 004067 634 ------LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-T--------FYTE------------KY 686 (776)
Q Consensus 634 ------~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-~--------~~~~------------~~ 686 (776)
..+.++|+++|+||||++++.+|+.+|+.++++|+.+|+.++..+. . .+.. ..
T Consensus 330 ~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~ 409 (763)
T 1lns_A 330 THEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRN 409 (763)
T ss_dssp CCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGG
T ss_pred cccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhh
Confidence 1245799999999999999999999999999999999987643210 0 0000 00
Q ss_pred c-------------------------CCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCC
Q 004067 687 M-------------------------GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 741 (776)
Q Consensus 687 ~-------------------------~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~ 741 (776)
. ..+ .....|...++...+.+|++|+|++||..|..+++.++.++++++.. +.
T Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~-~~ 487 (763)
T 1lns_A 410 LDGADFLKGNAEYEKRLAEMTAALDRKSG-DYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-GH 487 (763)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHCTTTC-CCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-TC
T ss_pred cCcchhhhHHHHHHHHHHHHHhhhhhccC-chhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-CC
Confidence 0 000 01123345566778899999999999999999999999999999866 55
Q ss_pred CeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 742 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 742 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+.++++ ++++|.........++.+.+.+||+++|
T Consensus 488 ~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~L 521 (763)
T 1lns_A 488 AKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKL 521 (763)
T ss_dssp CEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHH
T ss_pred CeEEEE-eCCcccCccccchHHHHHHHHHHHHHHh
Confidence 666655 5679986333234456899999999875
No 96
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.83 E-value=5.9e-20 Score=187.08 Aligned_cols=240 Identities=15% Similarity=0.133 Sum_probs=160.3
Q ss_pred ceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCC--
Q 004067 524 PDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA-- 600 (776)
Q Consensus 524 ~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g-- 600 (776)
.+.+.+.+. .|..+.+.+|.|++.. .+++|+||++||+++... .|.. ...+...+++.||.|+++|.++.|
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~--~~~~p~vv~lHG~~~~~~---~~~~-~~~~~~~~~~~g~~vv~~d~~~rg~~ 95 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE--NRPLGVIYWLSGLTCTEQ---NFIT-KSGFQRYAAEHQVIVVAPDTSPRGEQ 95 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT--CCCEEEEEEECCTTCCSH---HHHH-HSCTHHHHHHHTCEEEEECSSCCSTT
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC--CCCCCEEEEEcCCCCCcc---chhh-cccHHHHHhhCCeEEEEecccccccc
Confidence 444555554 6788999999998742 368999999999876543 2321 112356777889999999965332
Q ss_pred CCch---------hhh-hhhhhcc-CCccHHHH-H-HHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEE
Q 004067 601 RRGL---------KFE-ASIKHNC-GRIDAEDQ-L-TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV 667 (776)
Q Consensus 601 ~~~~---------~~~-~~~~~~~-~~~~~~D~-~-~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v 667 (776)
..+. .+. ......+ ......+. . ..+.++.+... +.++++|+||||||++|+.++.++|++|++++
T Consensus 96 ~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~ 174 (283)
T 4b6g_A 96 VPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFP-TNGKRSIMGHSMGGHGALVLALRNQERYQSVS 174 (283)
T ss_dssp SCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSC-EEEEEEEEEETHHHHHHHHHHHHHGGGCSCEE
T ss_pred ccccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCC-CCCCeEEEEEChhHHHHHHHHHhCCccceeEE
Confidence 1111 100 0000000 00111222 2 33444444432 46799999999999999999999999999999
Q ss_pred EcCCCCCccccc--ccccccccCCCCCCccchhcCChhhhhccCC--CcEEEEecCCCCccChH-HHHHHHHHHHHCCCC
Q 004067 668 SGAPVTSWDGYD--TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFR-HTARLINALVAARKP 742 (776)
Q Consensus 668 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~v~~~-~~~~~~~~l~~~~~~ 742 (776)
+.+|..+..... ......+++. ....+...++...+.+++ .|+|++||+.|.+++.. .+..+++++++.+.+
T Consensus 175 ~~s~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~ 251 (283)
T 4b6g_A 175 AFSPILSPSLVPWGEKAFTAYLGK---DREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQP 251 (283)
T ss_dssp EESCCCCGGGSHHHHHHHHHHHCS---CGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCC
T ss_pred EECCccccccCcchhhhHHhhcCC---chHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCC
Confidence 999987654211 0011122222 234455667766666665 49999999999998863 378999999999999
Q ss_pred eEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 743 YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 743 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
++++++|+++|.+. .........++|+.++|
T Consensus 252 ~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 252 VDVRFHKGYDHSYY---FIASFIGEHIAYHAAFL 282 (283)
T ss_dssp CEEEEETTCCSSHH---HHHHHHHHHHHHHHTTC
T ss_pred ceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhc
Confidence 99999999999763 34566788899998875
No 97
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.83 E-value=2.2e-19 Score=182.17 Aligned_cols=217 Identities=18% Similarity=0.215 Sum_probs=143.9
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhh
Q 004067 529 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 608 (776)
Q Consensus 529 ~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~ 608 (776)
+.+.+|..+++..+.|++ .|+||++||.+++.. .|...+..|+++||.|+++|+||+|.|.....
T Consensus 4 ~~~~~g~~l~y~~~g~~~-------~~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~- 68 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD-------APVIHFHHGWPLSAD-------DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWD- 68 (276)
T ss_dssp EECTTSCEEEEEEESCTT-------SCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-
T ss_pred EECCCCcEEEEEecCCCC-------CCeEEEECCCCcchh-------HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-
Confidence 556789899988886533 267999999876543 34556788999999999999999999864211
Q ss_pred hhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-CCceEEEEEcCCCCCccc----------
Q 004067 609 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG---------- 677 (776)
Q Consensus 609 ~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-~~~~~~~v~~~~~~~~~~---------- 677 (776)
...++++.+.+..+++.- +.+++.|+||||||.+++.+++.+ |++++++|+.++......
T Consensus 69 -------~~~~~~~~~d~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 139 (276)
T 1zoi_A 69 -------GHDMDHYADDVAAVVAHL--GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLP 139 (276)
T ss_dssp -------CCSHHHHHHHHHHHHHHH--TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBC
T ss_pred -------CCCHHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccccccccccc
Confidence 123444444444443332 345899999999999999988877 999999998876432100
Q ss_pred ---ccc-----------cc---cc-cccCCC--C--CCcc---c-------------------hhcCChhhhhccCCCcE
Q 004067 678 ---YDT-----------FY---TE-KYMGLP--S--EDPV---G-------------------YEYSSVMHHVHKMKGKL 713 (776)
Q Consensus 678 ---~~~-----------~~---~~-~~~~~~--~--~~~~---~-------------------~~~~~~~~~~~~i~~P~ 713 (776)
+.. .+ .. .+.+.. . .... . +...+....+.++++|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 219 (276)
T 1zoi_A 140 KSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPV 219 (276)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCE
Confidence 000 00 00 011100 0 0000 0 00112233467889999
Q ss_pred EEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 714 LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 714 lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
|+++|++|..+|+....+.+..+ ..+.++++++++||.+ ..+.++++.+.+.+||.
T Consensus 220 l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 220 LVMHGDDDQIVPYENSGVLSAKL---LPNGALKTYKGYPHGM-PTTHADVINADLLAFIR 275 (276)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHH---STTEEEEEETTCCTTH-HHHTHHHHHHHHHHHHT
T ss_pred EEEEcCCCcccChHHHHHHHHhh---CCCceEEEcCCCCCch-hhhCHHHHHHHHHHHhc
Confidence 99999999999987444443333 2578999999999987 45678899999999985
No 98
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.83 E-value=1.8e-19 Score=186.79 Aligned_cols=216 Identities=17% Similarity=0.132 Sum_probs=148.9
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCCCCCchhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
+|..+ +.|.... .+.|+||++|||+....... .+..++..|+. .||.|+++|||+++....
T Consensus 66 ~g~~~----~~p~~~~---~~~~~vv~~HGgg~~~g~~~----~~~~~~~~la~~~g~~v~~~dyr~~~~~~~------- 127 (322)
T 3k6k_A 66 GGVPC----IRQATDG---AGAAHILYFHGGGYISGSPS----THLVLTTQLAKQSSATLWSLDYRLAPENPF------- 127 (322)
T ss_dssp TTEEE----EEEECTT---CCSCEEEEECCSTTTSCCHH----HHHHHHHHHHHHHTCEEEEECCCCTTTSCT-------
T ss_pred CCEeE----EecCCCC---CCCeEEEEEcCCcccCCChH----HHHHHHHHHHHhcCCEEEEeeCCCCCCCCC-------
Confidence 66555 4554421 23345999999763221111 23344566665 599999999998775431
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCc----eEEEEEcCCCCCccccccccc----
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTSWDGYDTFYT---- 683 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~----~~~~v~~~~~~~~~~~~~~~~---- 683 (776)
...++|+.++++++.++ .++.++|+|+|+||||.+|+.++.++++. ++++++.+|+.++......+.
T Consensus 128 ----~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~ 202 (322)
T 3k6k_A 128 ----PAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLAD 202 (322)
T ss_dssp ----THHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTGG
T ss_pred ----chHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhccC
Confidence 12378999999999987 45889999999999999999999886654 899999999887542211110
Q ss_pred --------------ccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEec
Q 004067 684 --------------EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 749 (776)
Q Consensus 684 --------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 749 (776)
..+.+.... .....+++.......+|+|+++|++|.+ ..++..+++++++.++++++++||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~sp~~~~~~~~pP~li~~G~~D~~--~~~~~~~~~~l~~~g~~~~l~~~~ 277 (322)
T 3k6k_A 203 RDFLAEPDTLGEMSELYVGGEDR---KNPLISPVYADLSGLPEMLIHVGSEEAL--LSDSTTLAERAGAAGVSVELKIWP 277 (322)
T ss_dssp GCSSSCHHHHHHHHHHHHTTSCT---TCTTTCGGGSCCTTCCCEEEEEESSCTT--HHHHHHHHHHHHHTTCCEEEEEET
T ss_pred CCCcCCHHHHHHHHHHhcCCCCC---CCCcCCcccccccCCCcEEEEECCcCcc--HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 111111000 0011233332223336999999999987 467889999999999999999999
Q ss_pred CCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 004067 750 DERHMPRR----HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 750 ~~~H~~~~----~~~~~~~~~~~~~fl~~~l 776 (776)
+++|.+.. .+...++++.+.+||+++|
T Consensus 278 g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3k6k_A 278 DMPHVFQMYGKFVNAADISIKEICHWISARI 308 (322)
T ss_dssp TCCTTGGGGTTTCHHHHHHHHHHHHHHHTTC
T ss_pred CCccccccccccChHHHHHHHHHHHHHHHHH
Confidence 99998732 2346789999999999875
No 99
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.83 E-value=9.3e-20 Score=183.41 Aligned_cols=237 Identities=14% Similarity=0.004 Sum_probs=158.7
Q ss_pred CceEEEEEcC-CCcEEEEEEEcCCCCC---CCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCC
Q 004067 523 PPDIVQIQAN-DGTVLYGALYKPDESR---YGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG 598 (776)
Q Consensus 523 ~~~~~~~~~~-dg~~l~~~~~~P~~~~---~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg 598 (776)
..+.+++.+. .|..+.+++|.|++.. ...+++|+||++||++++.. .|... ......+++.|+.|+++|+++
T Consensus 6 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~---~~~~~-~~~~~~~~~~~~~v~~~~~~~ 81 (263)
T 2uz0_A 6 AVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN---SWLKR-TNVERLLRGTNLIVVMPNTSN 81 (263)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTT---HHHHH-SCHHHHTTTCCCEEEECCCTT
T ss_pred eEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH---HHHhc-cCHHHHHhcCCeEEEEECCCC
Confidence 4566777654 6788999999998741 02367899999999876543 22210 012344456899999999998
Q ss_pred CCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc
Q 004067 599 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 678 (776)
Q Consensus 599 ~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 678 (776)
++.+......... ....+|+...++.+..+..+|.++++|+|||+||++++.++. +|++++++++.+|..++..+
T Consensus 82 ~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~ 156 (263)
T 2uz0_A 82 GWYTDTQYGFDYY----TALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNF 156 (263)
T ss_dssp STTSBCTTSCBHH----HHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSC
T ss_pred CccccCCCcccHH----HHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhc
Confidence 7654321100000 011334555454443323457789999999999999999999 99999999999998876542
Q ss_pred ccc--------ccccccCCCCCCccchhcCChhhhhccCC--CcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEe
Q 004067 679 DTF--------YTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 748 (776)
Q Consensus 679 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 748 (776)
... +...+++.+ ....+...++...+.++. .|+|++||+.|.+++ .+..+++.+++.+.+++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~ 232 (263)
T 2uz0_A 157 SPESQNLGSPAYWRGVFGEI--RDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHS 232 (263)
T ss_dssp CGGGTTCSCHHHHHHHHCCC--SCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccccccchhHHHHcCCh--hhhccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEEEC
Confidence 210 001111211 112344556766777775 799999999999874 568899999999999999999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 749 PDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 749 ~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
++ +|.+. ...+....+.+||.++|
T Consensus 233 ~g-~H~~~---~~~~~~~~~~~~l~~~l 256 (263)
T 2uz0_A 233 AG-THEWY---YWEKQLEVFLTTLPIDF 256 (263)
T ss_dssp SC-CSSHH---HHHHHHHHHHHHSSSCC
T ss_pred CC-CcCHH---HHHHHHHHHHHHHHhhc
Confidence 99 99762 23567788899987654
No 100
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.82 E-value=1.1e-19 Score=193.47 Aligned_cols=250 Identities=15% Similarity=0.116 Sum_probs=164.5
Q ss_pred hhccCCCCceEEEEEcCCCcEEEEEEEcCCCCCC-CCCCceEEEEEcCCCCccccccccccc--chhhhHHHHhCCcEEE
Q 004067 516 IKRLQLEPPDIVQIQANDGTVLYGALYKPDESRY-GPPPYKTLISVYGGPCVQLVCDSWINT--VDMRAQYLRSKGILVW 592 (776)
Q Consensus 516 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~-~~~~~p~vl~~HG~~~~~~~~~~~~~~--~~~~~~~l~~~G~~v~ 592 (776)
+....+ ..+...+.+.||..+.++.+.|..... ..++.|+||++||.+++.. .|... ...++..|+++||.|+
T Consensus 20 ~~~~~~-~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~---~~~~~~~~~~~a~~l~~~G~~vi 95 (377)
T 1k8q_A 20 ITYWGY-PAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT---NWISNLPNNSLAFILADAGYDVW 95 (377)
T ss_dssp HHHTTC-CCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG---GGSSSCTTTCHHHHHHHTTCEEE
T ss_pred HHHcCC-CceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchh---hhhcCCCcccHHHHHHHCCCCEE
Confidence 333444 578888999999999999997754210 0125689999999877654 23221 1234568999999999
Q ss_pred EECCCCCCCCchhhhh-hhhh---ccCC-ccHH-HHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCC---ce
Q 004067 593 KLDNRGTARRGLKFEA-SIKH---NCGR-IDAE-DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD---VF 663 (776)
Q Consensus 593 ~~d~rg~g~~~~~~~~-~~~~---~~~~-~~~~-D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~---~~ 663 (776)
++|+||+|.+...... .... .+.. .... |+.+++++++++. +.++++++||||||.+++.++.++|+ ++
T Consensus 96 ~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v 173 (377)
T 1k8q_A 96 LGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRI 173 (377)
T ss_dssp ECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHTTE
T ss_pred EecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhhhhh
Confidence 9999999988642100 0000 0000 1133 7777888877653 34689999999999999999999998 79
Q ss_pred EEEEEcCCCCCcccccccc---c-------ccccC---------------------------------------------
Q 004067 664 QCAVSGAPVTSWDGYDTFY---T-------EKYMG--------------------------------------------- 688 (776)
Q Consensus 664 ~~~v~~~~~~~~~~~~~~~---~-------~~~~~--------------------------------------------- 688 (776)
+++|+.+|...+......+ . ...++
T Consensus 174 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (377)
T 1k8q_A 174 KTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNM 253 (377)
T ss_dssp EEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCG
T ss_pred hEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCH
Confidence 9999998875432111000 0 00000
Q ss_pred ---------CCCCCc-cc------------hhcC----------------ChhhhhccCCCcEEEEecCCCCccChHHHH
Q 004067 689 ---------LPSEDP-VG------------YEYS----------------SVMHHVHKMKGKLLLVHGMIDENVHFRHTA 730 (776)
Q Consensus 689 ---------~~~~~~-~~------------~~~~----------------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~ 730 (776)
.+.... .. +... .+...+.++++|+|+++|++|.++|+..+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 333 (377)
T 1k8q_A 254 SRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVD 333 (377)
T ss_dssp GGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHH
Confidence 000000 00 0000 012237788999999999999999999888
Q ss_pred HHHHHHHHCCCCeE-EEEecCCCCCCCC--CCcHHHHHHHHHHHHHHh
Q 004067 731 RLINALVAARKPYE-ILIFPDERHMPRR--HRDRIYMEERIWEFIERT 775 (776)
Q Consensus 731 ~~~~~l~~~~~~~~-~~~~~~~~H~~~~--~~~~~~~~~~~~~fl~~~ 775 (776)
.+++.+ .+.. +++++++||.... .+..+++.+.+.+||+++
T Consensus 334 ~~~~~~----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 334 LLLSKL----PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp HHHTTC----TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred HHHHhC----cCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 877765 3444 8999999998632 467889999999999864
No 101
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.82 E-value=1.4e-19 Score=181.85 Aligned_cols=189 Identities=15% Similarity=0.019 Sum_probs=134.6
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhC--CcEEEEECCCC---CCCCchhhh-----hhh----hhccCCc
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRG---TARRGLKFE-----ASI----KHNCGRI 617 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rg---~g~~~~~~~-----~~~----~~~~~~~ 617 (776)
++.|+||++||.+++.. .+..+++.|+.. ++.+++|+-+. ..+.|..|. ... .......
T Consensus 64 ~~~plVI~LHG~G~~~~-------~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~ 136 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGA-------DLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAA 136 (285)
T ss_dssp CCSEEEEEECCTTBCHH-------HHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHH-------HHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHH
Confidence 67899999999655432 223345666543 88999987531 011121111 000 0000001
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccch
Q 004067 618 DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGY 697 (776)
Q Consensus 618 ~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (776)
...++.+.++.+.++..+|.+||+|+|+|+||++++.++.++|+.+++++++++..... .
T Consensus 137 ~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~------------------~-- 196 (285)
T 4fhz_A 137 AARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAP------------------E-- 196 (285)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCH------------------H--
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCc------------------h--
Confidence 23456666777777777899999999999999999999999999999999987742110 0
Q ss_pred hcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 698 EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 698 ~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
......+.+.|+|++||+.|.+||++.++++++.|++.|.++++++|++.+|.+. .+.+..+.+||+++|
T Consensus 197 ----~~~~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~-----~~~l~~~~~fL~~~L 266 (285)
T 4fhz_A 197 ----RLAEEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA-----PDGLSVALAFLKERL 266 (285)
T ss_dssp ----HHHHHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HHHHHHHHHHHHHHC
T ss_pred ----hhhhhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-----HHHHHHHHHHHHHHC
Confidence 0111233467999999999999999999999999999999999999999999873 344688999999886
No 102
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.82 E-value=5.9e-19 Score=171.88 Aligned_cols=184 Identities=13% Similarity=-0.010 Sum_probs=134.6
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHh--CCcEEEEECCCC-------------------CCCCchhhhhhh
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRG-------------------TARRGLKFEASI 610 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rg-------------------~g~~~~~~~~~~ 610 (776)
++.|+||++||.+++.. .+..++..|++ .||.|+++|+|| +|.+........
T Consensus 12 ~~~~~vv~~HG~~~~~~-------~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~ 84 (218)
T 1auo_A 12 PADACVIWLHGLGADRY-------DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEEL 84 (218)
T ss_dssp CCSEEEEEECCTTCCTT-------TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHH
T ss_pred CCCcEEEEEecCCCChh-------hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHH
Confidence 46799999999776543 34456788888 999999998763 221111111000
Q ss_pred hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHh-hCCCceEEEEEcCCCCCcccccccccccccCC
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA-RFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 689 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 689 (776)
. ...+++...++.+.+ ..++.++++++||||||.+++.++. ++|++++++++.+|..... . .
T Consensus 85 -~----~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~--------~---~ 147 (218)
T 1auo_A 85 -E----VSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF--------G---D 147 (218)
T ss_dssp -H----HHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC--------C---T
T ss_pred -H----HHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc--------h---h
Confidence 0 114455555565554 3567889999999999999999999 9999999999999876530 0 0
Q ss_pred CCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHH
Q 004067 690 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIW 769 (776)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 769 (776)
+. . ....+++.|+|+++|++|..++++.++.+++.+.+.+.++++++++ ++|.+. .+..+.+.
T Consensus 148 ~~----~-------~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~~~~ 210 (218)
T 1auo_A 148 EL----E-------LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL-----PQEIHDIG 210 (218)
T ss_dssp TC----C-------CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC-----HHHHHHHH
T ss_pred hh----h-------hhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccC-----HHHHHHHH
Confidence 00 0 0124567899999999999999999999999999888899999999 999872 23467888
Q ss_pred HHHHHhC
Q 004067 770 EFIERTL 776 (776)
Q Consensus 770 ~fl~~~l 776 (776)
+||.++|
T Consensus 211 ~~l~~~l 217 (218)
T 1auo_A 211 AWLAARL 217 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8988764
No 103
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.82 E-value=2.6e-19 Score=173.19 Aligned_cols=181 Identities=12% Similarity=-0.047 Sum_probs=134.5
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEEC-------------CCCCCCCchhhhhhhhhccCCcc
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLD-------------NRGTARRGLKFEASIKHNCGRID 618 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d-------------~rg~g~~~~~~~~~~~~~~~~~~ 618 (776)
.+.| ||++||.+++.. .|..++..|+ .+|.|+++| ++|+|..+...... ......
T Consensus 15 ~~~p-vv~lHG~g~~~~-------~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~---~~~~~~ 82 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEH-------QLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDL---ESLDEE 82 (209)
T ss_dssp TSCC-EEEECCTTCCTT-------TTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCH---HHHHHH
T ss_pred CCCC-EEEEeCCCCCHH-------HHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCH---HHHHHH
Confidence 4668 999999766543 2344566666 789999999 55554432211100 000123
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchh
Q 004067 619 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYE 698 (776)
Q Consensus 619 ~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (776)
.+++.+.++.+.++..+|.++++|+||||||++++.++.++|++++++++.+|.......
T Consensus 83 ~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------- 142 (209)
T 3og9_A 83 TDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE-------------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC--------------------
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc--------------------
Confidence 556677777777766678899999999999999999999999999999999886432100
Q ss_pred cCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 699 YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 699 ~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
......+.|+|++||++|.++|++.+.++++.+++.+.++++++++ ++|.+. .+....+.+||+++
T Consensus 143 -----~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 143 -----QTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLTET 208 (209)
T ss_dssp -----CCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHHHH
T ss_pred -----ccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHHhh
Confidence 0123456899999999999999999999999999999999999998 699873 34568899999875
No 104
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.82 E-value=1.4e-19 Score=186.62 Aligned_cols=225 Identities=16% Similarity=0.117 Sum_probs=158.0
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHH-hCCcEEEEECCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTAR 601 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg~g~ 601 (776)
..+.+.++..+| .+.+++| +.. ++.|+||++||++...... ..+..++..|+ ..||.|+++|+||+|.
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~~-----~~~p~vv~~HGgg~~~g~~----~~~~~~~~~la~~~g~~Vv~~dyrg~g~ 123 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQK-----PDSPVLVYYHGGGFVICSI----ESHDALCRRIARLSNSTVVSVDYRLAPE 123 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ESS-----SSEEEEEEECCSTTTSCCT----GGGHHHHHHHHHHHTSEEEEEECCCTTT
T ss_pred eEEEEEecCCCC-cEEEEEE-cCC-----CCceEEEEECCcccccCCh----hHhHHHHHHHHHHhCCEEEEecCCCCCC
Confidence 477888888777 7999998 432 4679999999987321111 12344567777 6899999999999987
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhCCCc----eEEEEEcCCCCC
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTS 674 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~~~~----~~~~v~~~~~~~ 674 (776)
+..+ ....|+.++++++.+. ..+++++|+|+|||+||.+++.++.++++. ++++++.+|..+
T Consensus 124 ~~~p-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (311)
T 1jji_A 124 HKFP-----------AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN 192 (311)
T ss_dssp SCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred CCCC-----------CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccC
Confidence 7521 1256888888888775 246778999999999999999999877655 899999999876
Q ss_pred cccccccc------------------cccccCCCCCCccchhcCChhh-hhccCCCcEEEEecCCCCccChHHHHHHHHH
Q 004067 675 WDGYDTFY------------------TEKYMGLPSEDPVGYEYSSVMH-HVHKMKGKLLLVHGMIDENVHFRHTARLINA 735 (776)
Q Consensus 675 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~ 735 (776)
.......+ ...++..... ......+++. .+..+ .|+|+++|+.|.+++ .+..++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~~--~~~~~~~~ 267 (311)
T 1jji_A 193 FVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREED--KFNPLASVIFADLENL-PPALIITAEYDPLRD--EGEVFGQM 267 (311)
T ss_dssp SSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGG--GGCTTTSGGGSCCTTC-CCEEEEEEEECTTHH--HHHHHHHH
T ss_pred CCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCcc--CCCcccCcccccccCC-ChheEEEcCcCcchH--HHHHHHHH
Confidence 53211100 0111111000 0001112222 12222 599999999999873 67888999
Q ss_pred HHHCCCCeEEEEecCCCCCCCC----CCcHHHHHHHHHHHHHH
Q 004067 736 LVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIER 774 (776)
Q Consensus 736 l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~ 774 (776)
+++.+.+++++++++++|.+.. .....++.+.+.+||++
T Consensus 268 l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 268 LRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9999999999999999998742 23457788999999975
No 105
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.82 E-value=5e-19 Score=179.16 Aligned_cols=215 Identities=19% Similarity=0.230 Sum_probs=142.6
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhh
Q 004067 529 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 608 (776)
Q Consensus 529 ~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~ 608 (776)
+++.+|.++++..+. ..|+||++||.+++.. .|...+..|+++||.|+++|+||+|.|.....
T Consensus 3 ~~~~~g~~l~y~~~g---------~~~~vvllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~- 65 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG---------SGQPIVFSHGWPLNAD-------SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS- 65 (273)
T ss_dssp EECTTSCEEEEEEES---------CSSEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-
T ss_pred EecCCCcEEEEEEcC---------CCCEEEEECCCCCcHH-------HHhhHHhhHhhCCcEEEEECCCCCCCCCCCCC-
Confidence 566788888877663 1257999999876543 34556788999999999999999998864311
Q ss_pred hhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-CCceEEEEEcCCCCCccc--------cc
Q 004067 609 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG--------YD 679 (776)
Q Consensus 609 ~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-~~~~~~~v~~~~~~~~~~--------~~ 679 (776)
...++++.+.+..+++.- +.+++.|+||||||.+++.+++++ |++++++|+.++...... ..
T Consensus 66 -------~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (273)
T 1a8s_A 66 -------GNDMDTYADDLAQLIEHL--DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP 136 (273)
T ss_dssp -------CCSHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC
T ss_pred -------CCCHHHHHHHHHHHHHHh--CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCc
Confidence 123445555544444432 446899999999999999877766 899999998876432100 00
Q ss_pred -c---------------ccc---c-cccCCC--C--CCcc---c-------------------hhcCChhhhhccCCCcE
Q 004067 680 -T---------------FYT---E-KYMGLP--S--EDPV---G-------------------YEYSSVMHHVHKMKGKL 713 (776)
Q Consensus 680 -~---------------~~~---~-~~~~~~--~--~~~~---~-------------------~~~~~~~~~~~~i~~P~ 713 (776)
. .+. . .+.+.. . .... . +...+....+.++++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 216 (273)
T 1a8s_A 137 MEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPT 216 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCE
T ss_pred HHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCE
Confidence 0 000 0 011100 0 0000 0 01112233467889999
Q ss_pred EEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 714 LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 714 lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
|+++|++|..+|+....+....+ ..+.++++++++||.+ ..+.++++.+.+.+||.
T Consensus 217 lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 217 LVVHGDADQVVPIEASGIASAAL---VKGSTLKIYSGAPHGL-TDTHKDQLNADLLAFIK 272 (273)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHH---STTCEEEEETTCCSCH-HHHTHHHHHHHHHHHHH
T ss_pred EEEECCCCccCChHHHHHHHHHh---CCCcEEEEeCCCCCcc-hhhCHHHHHHHHHHHHh
Confidence 99999999999987544444333 2467999999999987 45678899999999986
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.82 E-value=3.8e-17 Score=174.70 Aligned_cols=258 Identities=11% Similarity=0.012 Sum_probs=174.7
Q ss_pred ceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEe--CCCcEEEEeCCCC
Q 004067 81 RKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCS 158 (776)
Q Consensus 81 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~ 158 (776)
..|++||+++++....... +..+..+.|+| ||++|++. .++.|++||+.++
T Consensus 12 ~~v~v~d~~~~~~~~~~~~------------------------~~~~~~~~~s~---dg~~l~~~~~~d~~i~v~d~~~~ 64 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPV------------------------GSNPMGAVISP---DGTKVYVANAHSNDVSIIDTATN 64 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC------------------------SSSEEEEEECT---TSSEEEEEEGGGTEEEEEETTTT
T ss_pred CEEEEEECCCCeEEEEeec------------------------CCCcceEEECC---CCCEEEEECCCCCeEEEEECCCC
Confidence 5799999999887655532 23578899999 99998766 6789999999998
Q ss_pred ccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEEC
Q 004067 159 KPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWS 236 (776)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws 236 (776)
+....+.... .+..++|||||++|++... +.|+++|+.+++.......+.. ...++|+
T Consensus 65 ~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~------------------~~~~~~s 124 (391)
T 1l0q_A 65 NVIATVPAGS--SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS------------------PLGLALS 124 (391)
T ss_dssp EEEEEEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS------------------EEEEEEC
T ss_pred eEEEEEECCC--CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC------------------cceEEEC
Confidence 8773443332 4788999999999988874 5799999999987665543321 3478899
Q ss_pred CCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceE
Q 004067 237 LDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYL 316 (776)
Q Consensus 237 pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 316 (776)
|||+.|++..... ..|++||+.+++...... .....
T Consensus 125 ~dg~~l~~~~~~~-----------------------------------~~v~~~d~~~~~~~~~~~---------~~~~~ 160 (391)
T 1l0q_A 125 PDGKKLYVTNNGD-----------------------------------KTVSVINTVTKAVINTVS---------VGRSP 160 (391)
T ss_dssp TTSSEEEEEETTT-----------------------------------TEEEEEETTTTEEEEEEE---------CCSSE
T ss_pred CCCCEEEEEeCCC-----------------------------------CEEEEEECCCCcEEEEEe---------cCCCc
Confidence 9999887665321 358999999887655421 22345
Q ss_pred EEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEE
Q 004067 317 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 396 (776)
Q Consensus 317 ~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~ 396 (776)
..+.|+|||+.+++... ....|++||+.+++............ .-.|+| ++..++..+...+...|+
T Consensus 161 ~~~~~~~dg~~l~~~~~---~~~~v~~~d~~~~~~~~~~~~~~~~~---~~~~~~-------~g~~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANF---DSMSISVIDTVTNSVIDTVKVEAAPS---GIAVNP-------EGTKAYVTNVDKYFNTVS 227 (391)
T ss_dssp EEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEEECSSEEE---EEEECT-------TSSEEEEEEECSSCCEEE
T ss_pred ceEEECCCCCEEEEEeC---CCCEEEEEECCCCeEEEEEecCCCcc---ceEECC-------CCCEEEEEecCcCCCcEE
Confidence 78999999997765542 23469999999987766554332111 112222 223344444322345999
Q ss_pred EEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEE
Q 004067 397 LHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 445 (776)
Q Consensus 397 ~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~ 445 (776)
+||+.+++..........+..+ .|++||+.|++....++. +.+|.+
T Consensus 228 ~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~s~~~d~~--v~v~d~ 273 (391)
T 1l0q_A 228 MIDTGTNKITARIPVGPDPAGI-AVTPDGKKVYVALSFXNT--VSVIDT 273 (391)
T ss_dssp EEETTTTEEEEEEECCSSEEEE-EECTTSSEEEEEETTTTE--EEEEET
T ss_pred EEECCCCeEEEEEecCCCccEE-EEccCCCEEEEEcCCCCE--EEEEEC
Confidence 9998877654333333334444 499999998888766542 455443
No 107
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.82 E-value=2.2e-19 Score=180.77 Aligned_cols=215 Identities=14% Similarity=0.137 Sum_probs=147.7
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhh
Q 004067 528 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 607 (776)
Q Consensus 528 ~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~ 607 (776)
.+.+.+|.++++..+.+.+ .|+||++||.+.+.. .|...+..|++ +|.|+++|+||+|.|....
T Consensus 8 ~~~~~~g~~l~y~~~G~~~-------~p~lvl~hG~~~~~~-------~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~- 71 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAAE-------KPLLALSNSIGTTLH-------MWDAQLPALTR-HFRVLRYDARGHGASSVPP- 71 (266)
T ss_dssp EEECTTSCEEEEEEESCTT-------SCEEEEECCTTCCGG-------GGGGGHHHHHT-TCEEEEECCTTSTTSCCCC-
T ss_pred EEeccCCcEEEEEecCCCC-------CCEEEEeCCCccCHH-------HHHHHHHHhhc-CcEEEEEcCCCCCCCCCCC-
Confidence 4566799999998886532 378999999766543 24445677776 7999999999999886421
Q ss_pred hhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc--------
Q 004067 608 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-------- 679 (776)
Q Consensus 608 ~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-------- 679 (776)
..+.++++.+.+..+++.- ..+++.++||||||.+++.+|.++|++++++|+.++........
T Consensus 72 -------~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~ 142 (266)
T 3om8_A 72 -------GPYTLARLGEDVLELLDAL--EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAA 142 (266)
T ss_dssp -------SCCCHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHHHh--CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHH
Confidence 1233555555555555543 34589999999999999999999999999999987643211000
Q ss_pred ----c------------cccccccCCCCC------------Cccc-------hhcCChhhhhccCCCcEEEEecCCCCcc
Q 004067 680 ----T------------FYTEKYMGLPSE------------DPVG-------YEYSSVMHHVHKMKGKLLLVHGMIDENV 724 (776)
Q Consensus 680 ----~------------~~~~~~~~~~~~------------~~~~-------~~~~~~~~~~~~i~~P~lii~G~~D~~v 724 (776)
. ++...+...... .... +...+....+.++++|+|+++|++|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~ 222 (266)
T 3om8_A 143 VLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVT 222 (266)
T ss_dssp HHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSS
T ss_pred HHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCC
Confidence 0 000000000000 0000 0111223456788999999999999999
Q ss_pred ChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 725 HFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 725 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
++..+..+.+.+ .+.++++++ +||.. ..+.++++.+.+.+||.
T Consensus 223 ~~~~~~~l~~~i----p~a~~~~i~-~gH~~-~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 223 AASHGELIAASI----AGARLVTLP-AVHLS-NVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp CHHHHHHHHHHS----TTCEEEEES-CCSCH-HHHCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhC----CCCEEEEeC-CCCCc-cccCHHHHHHHHHHHhc
Confidence 999888887765 567888998 79976 67888999999999985
No 108
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.81 E-value=9.8e-20 Score=194.69 Aligned_cols=229 Identities=11% Similarity=-0.019 Sum_probs=159.0
Q ss_pred CCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 522 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 522 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
...+.+.++. +|..+.++++.|... ++.|+||++||..+... . .+..++..++++||.|+++|+||+|.
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~~----~~~P~vv~~hG~~~~~~---~---~~~~~~~~l~~~G~~V~~~D~~G~G~ 234 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNTD----KPHPVVIVSAGLDSLQT---D---MWRLFRDHLAKHDIAMLTVDMPSVGY 234 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCSS----SCEEEEEEECCTTSCGG---G---GHHHHHHTTGGGTCEEEEECCTTSGG
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCCC----CCCCEEEEECCCCccHH---H---HHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 3567888887 788899999999763 57899999999766532 1 12234567888999999999999987
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 681 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~ 681 (776)
+..... ..........+++++.....+|.++|+|+||||||++++.++..+|++++++|+.+|..+.......
T Consensus 235 s~~~~~-------~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~ 307 (415)
T 3mve_A 235 SSKYPL-------TEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQ 307 (415)
T ss_dssp GTTSCC-------CSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHH
T ss_pred CCCCCC-------CCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHH
Confidence 753211 0011223456777887777788899999999999999999999999999999999988542111000
Q ss_pred --------c---cccccCCCCCCcc----chhcCChhhh----hccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCC
Q 004067 682 --------Y---TEKYMGLPSEDPV----GYEYSSVMHH----VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 742 (776)
Q Consensus 682 --------~---~~~~~~~~~~~~~----~~~~~~~~~~----~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 742 (776)
+ ....++....... .+...++... +.++++|+|+++|++|.++|+..+..+.+ ...+
T Consensus 308 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~----~~~~ 383 (415)
T 3mve_A 308 KLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAF----FSTY 383 (415)
T ss_dssp HHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHH----TBTT
T ss_pred HHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHH----hCCC
Confidence 0 0001111111111 1111122111 35788999999999999999988877666 4578
Q ss_pred eEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 743 YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 743 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
.+++++++..+ .....++...+.+||+++|
T Consensus 384 ~~l~~i~g~~~----h~~~~~~~~~i~~fL~~~L 413 (415)
T 3mve_A 384 GKAKKISSKTI----TQGYEQSLDLAIKWLEDEL 413 (415)
T ss_dssp CEEEEECCCSH----HHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecCCCc----ccchHHHHHHHHHHHHHHh
Confidence 89999998222 1256788899999999874
No 109
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.81 E-value=6.6e-19 Score=176.14 Aligned_cols=213 Identities=18% Similarity=0.156 Sum_probs=139.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 612 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~ 612 (776)
+|..+++..+.+ ..|+||++||.+++.. . .|...+..|+++||.|+++|+||+|.|.....
T Consensus 10 ~g~~l~~~~~g~--------~~~~vvllHG~~~~~~--~----~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----- 70 (254)
T 2ocg_A 10 NGVQLHYQQTGE--------GDHAVLLLPGMLGSGE--T----DFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDR----- 70 (254)
T ss_dssp TTEEEEEEEEEC--------CSEEEEEECCTTCCHH--H----HCHHHHHHSCTTTEEEEEECCTTSTTCCSSCC-----
T ss_pred CCEEEEEEEecC--------CCCeEEEECCCCCCCc--c----chHHHHHHHhhCCCeEEEECCCCCCCCCCCCC-----
Confidence 777788776642 1267999999765511 1 23445778888899999999999998864211
Q ss_pred ccCCccH-HHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc----------cc
Q 004067 613 NCGRIDA-EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----------TF 681 (776)
Q Consensus 613 ~~~~~~~-~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~----------~~ 681 (776)
.+..... .++..+++++.+. +.+++.++||||||.+|+.+|.++|++++++|+.++........ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 147 (254)
T 2ocg_A 71 DFPADFFERDAKDAVDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSK 147 (254)
T ss_dssp CCCTTHHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGG
T ss_pred CCChHHHHHHHHHHHHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHH
Confidence 1110002 2333444444443 34689999999999999999999999999999987753211000 00
Q ss_pred ccccc-------cCCC-----CC----C-ccch---hcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCC
Q 004067 682 YTEKY-------MGLP-----SE----D-PVGY---EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 741 (776)
Q Consensus 682 ~~~~~-------~~~~-----~~----~-~~~~---~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~ 741 (776)
+.... .+.. +. . ...+ ........+.++++|+|+++|++|..+|+..+..+.+.+ .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~ 223 (254)
T 2ocg_A 148 WSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV----K 223 (254)
T ss_dssp SCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS----T
T ss_pred HHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhC----C
Confidence 00000 0000 00 0 0000 001123456788999999999999999998887777665 4
Q ss_pred CeEEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 004067 742 PYEILIFPDERHMPRRHRDRIYMEERIWEFI 772 (776)
Q Consensus 742 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 772 (776)
+.++++++++||.+ ..+.++++.+.+.+||
T Consensus 224 ~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 224 GSRLHLMPEGKHNL-HLRFADEFNKLAEDFL 253 (254)
T ss_dssp TCEEEEETTCCTTH-HHHTHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCch-hhhCHHHHHHHHHHHh
Confidence 56899999999987 4467888999999997
No 110
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.81 E-value=1.4e-18 Score=175.92 Aligned_cols=215 Identities=16% Similarity=0.168 Sum_probs=142.7
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhh
Q 004067 529 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 608 (776)
Q Consensus 529 ~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~ 608 (776)
+++.+|..+++..+. +.|+||++||.+++.. .|...+..|++.||.|+++|+||+|.|....
T Consensus 3 ~~~~~g~~l~y~~~g---------~g~~vvllHG~~~~~~-------~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-- 64 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG---------QGRPVVFIHGWPLNGD-------AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW-- 64 (274)
T ss_dssp EECTTSCEEEEEEEC---------SSSEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--
T ss_pred EEccCCCEEEEEecC---------CCceEEEECCCcchHH-------HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCC--
Confidence 566788888877663 1257999999776543 3455678889999999999999999886421
Q ss_pred hhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-CCceEEEEEcCCCCCccc--------cc
Q 004067 609 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG--------YD 679 (776)
Q Consensus 609 ~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-~~~~~~~v~~~~~~~~~~--------~~ 679 (776)
....++++.+.+..+++.- +.+++.++||||||.+++.+++++ |++++++|+.++...... ..
T Consensus 65 ------~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (274)
T 1a8q_A 65 ------DGYDFDTFADDLNDLLTDL--DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP 136 (274)
T ss_dssp ------SCCSHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC
T ss_pred ------CCCcHHHHHHHHHHHHHHc--CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccch
Confidence 1123455555554444432 346899999999999999877776 899999998876432100 00
Q ss_pred -ccc------------------cccccCCC--C--CCcc----------------------chhcCChhhhhccCCCcEE
Q 004067 680 -TFY------------------TEKYMGLP--S--EDPV----------------------GYEYSSVMHHVHKMKGKLL 714 (776)
Q Consensus 680 -~~~------------------~~~~~~~~--~--~~~~----------------------~~~~~~~~~~~~~i~~P~l 714 (776)
..+ ...+.... . .... .+...+....+.++++|+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 216 (274)
T 1a8q_A 137 DEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTL 216 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEE
T ss_pred HHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEE
Confidence 000 00011100 0 0000 0011122345678899999
Q ss_pred EEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCC--cHHHHHHHHHHHHH
Q 004067 715 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHR--DRIYMEERIWEFIE 773 (776)
Q Consensus 715 ii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~ 773 (776)
+++|++|..+|+....+....+ ..+.++++++++||.+. .+ .++++.+.+.+||.
T Consensus 217 ii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 217 VVHGDDDQVVPIDATGRKSAQI---IPNAELKVYEGSSHGIA-MVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp EEEETTCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTTT-TSTTHHHHHHHHHHHHHT
T ss_pred EEecCcCCCCCcHHHHHHHHhh---CCCceEEEECCCCCcee-cccCCHHHHHHHHHHHhc
Confidence 9999999999987554444333 35679999999999874 45 78899999999985
No 111
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.81 E-value=2.1e-18 Score=169.00 Aligned_cols=183 Identities=14% Similarity=0.027 Sum_probs=134.8
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHh--CCcEEEEECCCC-------------------CCCCchhhhhhh
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRG-------------------TARRGLKFEASI 610 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rg-------------------~g~~~~~~~~~~ 610 (776)
++.|+||++||.+++.. .+..++..|++ .||.|+++|+|| +|.+........
T Consensus 22 ~~~~~vv~lHG~~~~~~-------~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~ 94 (226)
T 3cn9_A 22 NADACIIWLHGLGADRT-------DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQL 94 (226)
T ss_dssp TCCEEEEEECCTTCCGG-------GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHH
T ss_pred CCCCEEEEEecCCCChH-------HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhH
Confidence 57799999999876543 24456778887 999999988774 332211110000
Q ss_pred hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHh-hCCCceEEEEEcCCCCCcccccccccccccCC
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA-RFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 689 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 689 (776)
. ...+++...++.+.+ ..++.++++|+||||||.+++.++. ++|++++++++.+|....... +
T Consensus 95 -~----~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~-------~--- 158 (226)
T 3cn9_A 95 -N----ASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD-------L--- 158 (226)
T ss_dssp -H----HHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG-------C---
T ss_pred -H----HHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh-------h---
Confidence 0 013445555555544 3467789999999999999999999 999999999999987543210 0
Q ss_pred CCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHH
Q 004067 690 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIW 769 (776)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 769 (776)
.. ...+++.|+|+++|+.|..++++.+.++++.+.+.+.++++++++ ++|.+. .+..+.+.
T Consensus 159 ---------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~~i~ 219 (226)
T 3cn9_A 159 ---------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVS-----LEEIHDIG 219 (226)
T ss_dssp ---------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCC-----HHHHHHHH
T ss_pred ---------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcc-----hhhHHHHH
Confidence 00 124567899999999999999999999999999888899999999 999872 23467899
Q ss_pred HHHHHhC
Q 004067 770 EFIERTL 776 (776)
Q Consensus 770 ~fl~~~l 776 (776)
+||+++|
T Consensus 220 ~~l~~~l 226 (226)
T 3cn9_A 220 AWLRKRL 226 (226)
T ss_dssp HHHHHHC
T ss_pred HHHHhhC
Confidence 9999876
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.81 E-value=1.2e-16 Score=173.54 Aligned_cols=333 Identities=8% Similarity=-0.003 Sum_probs=212.4
Q ss_pred Ccee---EcCCCCEEEEEeCCCCc-----------CcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHh
Q 004067 58 TSIG---FSPDDNLITYLLSPDHS-----------LSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRER 123 (776)
Q Consensus 58 ~~~~---~SpDG~~ia~~~~~~~~-----------~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~ 123 (776)
...+ |+|+++.++..+..... ....||.+|.+++..+.+...+.
T Consensus 64 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~---------------------- 121 (433)
T 3bws_A 64 VEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKT---------------------- 121 (433)
T ss_dssp EEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEEC----------------------
T ss_pred EEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcC----------------------
Confidence 4455 99999988776543211 11278888887774443332111
Q ss_pred cCCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCC-----CCCCCccCceeCCCCCEEEEEEC-CcEEEEe
Q 004067 124 GLGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSS-----SSCSPVIDPHLSSDGTMIAFVRD-CELHVLN 196 (776)
Q Consensus 124 ~~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~-----~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~ 196 (776)
+..+..+.|+| +++.++.. .++.|++||+.+++.. .... .....+..+.|+|||+.++.... +.|++|+
T Consensus 122 ~~~~~~~~~s~---~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d 197 (433)
T 3bws_A 122 GFQPKSVRFID---NTRLAIPLLEDEGMDVLDINSGQTV-RLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFD 197 (433)
T ss_dssp SSCBCCCEESS---SSEEEEEBTTSSSEEEEETTTCCEE-EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEE
T ss_pred CCCceEEEEeC---CCeEEEEeCCCCeEEEEECCCCeEe-eecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEE
Confidence 12455788999 88766655 3557999999998876 3221 12223667899999986655543 6799999
Q ss_pred cCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCC
Q 004067 197 LLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYP 276 (776)
Q Consensus 197 l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (776)
+++++.......... .+..++|+|||+.|++.....
T Consensus 198 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~--------------------------- 233 (433)
T 3bws_A 198 LKTLAYKATVDLTGK-----------------WSKILLYDPIRDLVYCSNWIS--------------------------- 233 (433)
T ss_dssp TTTCCEEEEEECSSS-----------------SEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred CCCceEEEEEcCCCC-----------------CeeEEEEcCCCCEEEEEecCC---------------------------
Confidence 998876543332111 134788999999887655221
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecC----ceEEEEEEECCCCceE
Q 004067 277 FAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ----TKLKVLKFDIKTGQRK 352 (776)
Q Consensus 277 ~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~l~~~d~~~g~~~ 352 (776)
..|++||+.+++.... ......+..++|+|||+.++....... .+..|++||+.+++..
T Consensus 234 --------~~i~~~d~~~~~~~~~---------~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 234 --------EDISVIDRKTKLEIRK---------TDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp --------TEEEEEETTTTEEEEE---------CCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE
T ss_pred --------CcEEEEECCCCcEEEE---------ecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE
Confidence 3589999998876544 233445888999999997777654332 3678999999998766
Q ss_pred EEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEE
Q 004067 353 VILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTG 432 (776)
Q Consensus 353 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~ 432 (776)
.......... ...|+| +++.++++...++ .|++|++++++..........+..+ .|+++|+.+++..
T Consensus 297 ~~~~~~~~~~---~~~~~~-------~g~~l~~~~~~~~--~v~v~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~ 363 (433)
T 3bws_A 297 DTIGPPGNKR---HIVSGN-------TENKIYVSDMCCS--KIEVYDLKEKKVQKSIPVFDKPNTI-ALSPDGKYLYVSC 363 (433)
T ss_dssp EEEEEEECEE---EEEECS-------STTEEEEEETTTT--EEEEEETTTTEEEEEEECSSSEEEE-EECTTSSEEEEEE
T ss_pred eeccCCCCcc---eEEECC-------CCCEEEEEecCCC--EEEEEECCCCcEEEEecCCCCCCeE-EEcCCCCEEEEEe
Confidence 5544332211 112222 2234555556666 8999999877654443333444554 4999999888887
Q ss_pred ccCCCc----------eeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcC
Q 004067 433 TLDGPL----------ESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 498 (776)
Q Consensus 433 ~~~~~~----------~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~ 498 (776)
...+.. ...|+.+++. .+. ....+.....+..+.|+|||+.|+...+.. ..|.+++..
T Consensus 364 ~~~~~~~~~~~~~g~~dg~v~~~d~~-~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d---~~i~v~~~~ 431 (433)
T 3bws_A 364 RGPNHPTEGYLKKGLVLGKVYVIDTT-TDT----VKEFWEAGNQPTGLDVSPDNRYLVISDFLD---HQIRVYRRD 431 (433)
T ss_dssp CCCCCTTTCTTSCCSSCCEEEEEETT-TTE----EEEEEECSSSEEEEEECTTSCEEEEEETTT---TEEEEEEET
T ss_pred cCCCccccccccccccceEEEEEECC-CCc----EEEEecCCCCCceEEEcCCCCEEEEEECCC---CeEEEEEec
Confidence 653211 1256777763 232 344555555677889999999988765433 368888763
No 113
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.81 E-value=2.9e-17 Score=186.41 Aligned_cols=373 Identities=9% Similarity=0.061 Sum_probs=215.2
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+..+.... ....|++||.. .....+..| ...+....|+|
T Consensus 106 v~~v~fs~dg~~l~~~~~~~~-~~~~v~~wd~~-~~~~~l~gh------------------------~~~v~~v~f~p-- 157 (611)
T 1nr0_A 106 VKDISWDSESKRIAAVGEGRE-RFGHVFLFDTG-TSNGNLTGQ------------------------ARAMNSVDFKP-- 157 (611)
T ss_dssp EEEEEECTTSCEEEEEECCSS-CSEEEEETTTC-CBCBCCCCC------------------------SSCEEEEEECS--
T ss_pred eEEEEECCCCCEEEEEECCCC-ceeEEEEeeCC-CCcceecCC------------------------CCCceEEEECC--
Confidence 578999999999997765331 12478888842 222233322 24688999999
Q ss_pred CCceE-EEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCc
Q 004067 137 SKKKI-IMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNT 213 (776)
Q Consensus 137 ~dg~~-l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~ 213 (776)
|++. |+.. .++.|.+||..+++....+..+.. .+..++|||||+.||..+. +.|.+|++.+|+..........
T Consensus 158 -~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~-~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~-- 233 (611)
T 1nr0_A 158 -SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK-FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL-- 233 (611)
T ss_dssp -SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS--
T ss_pred -CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC-ceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc--
Confidence 9974 5544 788999999988776534544443 4888999999999988775 5799999998876543211100
Q ss_pred eecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEe-------ecCCCCCCCCCcceecCCCCCCCC----
Q 004067 214 VTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIM-------HQGKSSVGSEAQEDHAYPFAGASN---- 282 (776)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~---- 282 (776)
...+.. +.+..++|+|||+.|+..+.|. ....|.+. ....... ......+.+ .+...
T Consensus 234 ~~~~h~--------~~V~~v~~spdg~~l~s~s~D~-~v~lWd~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~l~s~s 301 (611)
T 1nr0_A 234 KNVAHS--------GSVFGLTWSPDGTKIASASADK-TIKIWNVATLKVEKTIPVGTRI-EDQQLGIIW--TKQALVSIS 301 (611)
T ss_dssp SSCSSS--------SCEEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEEEEECCSSG-GGCEEEEEE--CSSCEEEEE
T ss_pred cccccC--------CCEEEEEECCCCCEEEEEeCCC-eEEEEeCCCCceeeeecCCCCc-cceeEEEEE--cCCEEEEEe
Confidence 000111 1255889999999998776443 22222210 0000000 000000000 11100
Q ss_pred CeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEe--c--
Q 004067 283 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE--E-- 358 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~-- 358 (776)
....+.+|+..+++..... .++...+..++|||||+.|+..+ .+..|.+||+.++....+... .
T Consensus 302 ~d~~i~~~~~~~~~~~~~~--------~gh~~~v~~l~~spdg~~l~s~s----~D~~v~~Wd~~~~~~~~~~~~~h~~~ 369 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVR--------YGHNKAITALSSSADGKTLFSAD----AEGHINSWDISTGISNRVFPDVHATM 369 (611)
T ss_dssp TTCCEEEEETTTTEEEEEE--------CCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCCEEECSSCSCSSC
T ss_pred CCCcEEEEeCCCCCcceEE--------cCCCCCEEEEEEeCCCCEEEEEe----CCCcEEEEECCCCceeeecccCCcce
Confidence 1123678888877644331 45677899999999999888766 344688999887765332100 0
Q ss_pred --------cC------------ceeecc-------------------cccccCC--------------------------
Q 004067 359 --------LD------------SWVNLH-------------------DCFTPLD-------------------------- 373 (776)
Q Consensus 359 --------~~------------~~~~~~-------------------~~~~~~~-------------------------- 373 (776)
+. .|.... -.|++.+
T Consensus 370 v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~ 449 (611)
T 1nr0_A 370 ITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISY 449 (611)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSS
T ss_pred EEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCC
Confidence 00 010000 0011111
Q ss_pred --CCccccC-CeEEEEeccCCceEEEEEeCCCceeecc--ccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeC
Q 004067 374 --KGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPI--TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY 448 (776)
Q Consensus 374 --~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~l--t~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~ 448 (776)
..+++++ +.++++...++ .|++|+++++....+ ..+...+..+. |||||++|+..+. ++. +.+|.+..
T Consensus 450 ~v~~va~spdg~~lasgs~D~--~v~lwd~~~~~~~~~~~~~h~~~v~~v~-fspdg~~las~s~-d~~--v~~w~~~~- 522 (611)
T 1nr0_A 450 NSSCVALSNDKQFVAVGGQDS--KVHVYKLSGASVSEVKTIVHPAEITSVA-FSNNGAFLVATDQ-SRK--VIPYSVAN- 522 (611)
T ss_dssp CEEEEEECTTSCEEEEEETTS--EEEEEEEETTEEEEEEEEECSSCEEEEE-ECTTSSEEEEEET-TSC--EEEEEGGG-
T ss_pred CceEEEEeCCCCEEEEeCCCC--eEEEEEccCCceeeeeccCCCCceEEEE-ECCCCCEEEEEcC-CCC--EEEEEcCC-
Confidence 0012222 33555555566 888999877654322 33444566654 9999997655544 332 67776642
Q ss_pred CCCCCccccce--eec-CCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCc
Q 004067 449 PDWNHTLEAPV--KLT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 501 (776)
Q Consensus 449 ~~g~~~~~~~~--~l~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~ 501 (776)
.+. ... .+. ....+..++|||||++|+..... ..|.+|+..++.
T Consensus 523 -~~~----~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D----~~v~lW~~~~~~ 569 (611)
T 1nr0_A 523 -NFE----LAHTNSWTFHTAKVACVSWSPDNVRLATGSLD----NSVIVWNMNKPS 569 (611)
T ss_dssp -TTE----ESCCCCCCCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTCTT
T ss_pred -CCc----eeeeeeeeecccceeEEEECCCCCEEEEEECC----CcEEEEECCCcc
Confidence 122 111 122 22357889999999998876433 249999987765
No 114
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.81 E-value=1.2e-18 Score=179.34 Aligned_cols=219 Identities=12% Similarity=0.082 Sum_probs=147.0
Q ss_pred EEEEE---cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCC---
Q 004067 526 IVQIQ---ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT--- 599 (776)
Q Consensus 526 ~~~~~---~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~--- 599 (776)
.+++. ..++..+.+++|.|+... .+.|+||++||+++... .| +..++..++++||.|+++|+|+.
T Consensus 26 ~~~~~~~~~~~~~~l~~~~~~P~~~~---~~~p~vv~lHG~~~~~~---~~---~~~~~~~l~~~g~~v~~~d~~~~~~p 96 (304)
T 3d0k_A 26 AIPYLDDDRNADRPFTLNTYRPYGYT---PDRPVVVVQHGVLRNGA---DY---RDFWIPAADRHKLLIVAPTFSDEIWP 96 (304)
T ss_dssp EEEECC---CTTCCEEEEEEECTTCC---TTSCEEEEECCTTCCHH---HH---HHHTHHHHHHHTCEEEEEECCTTTSC
T ss_pred eEEecccCCCCCceEEEEEEeCCCCC---CCCcEEEEeCCCCCCHH---HH---HHHHHHHHHHCCcEEEEeCCccccCC
Confidence 35565 567888999999997632 46799999999876643 12 13347788889999999999944
Q ss_pred -----------CCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCC-ceEEEE
Q 004067 600 -----------ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAV 667 (776)
Q Consensus 600 -----------g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~~v 667 (776)
|.++.. .......+.|+.++++++.++..++.++|+|+||||||++++.++.++|+ .++++|
T Consensus 97 ~~~~~~~g~~~g~s~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~v 170 (304)
T 3d0k_A 97 GVESYNNGRAFTAAGNP------RHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVT 170 (304)
T ss_dssp HHHHTTTTTCBCTTSCB------CCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEE
T ss_pred CccccccCccccccCCC------CcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEE
Confidence 222211 00112235789999999998877788999999999999999999999985 677777
Q ss_pred EcC-CCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccC-----------------hHHH
Q 004067 668 SGA-PVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVH-----------------FRHT 729 (776)
Q Consensus 668 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~-----------------~~~~ 729 (776)
+.. |..++..... ....+... ...++......++.|+|++||+.|..+. ...+
T Consensus 171 l~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (304)
T 3d0k_A 171 AANPGWYTLPTFEH---RFPEGLDG------VGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARA 241 (304)
T ss_dssp EESCSSCCCSSTTS---BTTTSSBT------TTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHH
T ss_pred EecCcccccCCccc---cCccccCC------CCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHH
Confidence 544 5544322110 00011100 0123434444556899999999998742 2345
Q ss_pred HHHHHHHH----HCCCC--eEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 730 ARLINALV----AARKP--YEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 730 ~~~~~~l~----~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
..+++.++ +.+.+ ++++++|+++|.+ ......+.+||.+
T Consensus 242 ~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~------~~~~~~~~~~~~~ 286 (304)
T 3d0k_A 242 RHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDG------QAMSQVCASLWFD 286 (304)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEEEETTCCSCH------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeCCCCCch------HHHHHHHHHHHhh
Confidence 56666665 56666 9999999999976 2345666676653
No 115
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.81 E-value=2.9e-19 Score=180.82 Aligned_cols=204 Identities=15% Similarity=0.107 Sum_probs=142.2
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHH----HhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL----RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAE 627 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l----~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~ 627 (776)
++.|+||++||++...... -...|..++..| ++.||.|+++|+|+++.... ...++|+.++++
T Consensus 39 ~~~p~vv~lHGgg~~~g~~--~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~-----------~~~~~d~~~~~~ 105 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPEN--TPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN-----------PRNLYDAVSNIT 105 (273)
T ss_dssp TCCEEEEEECCSTTTCTTC--CGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT-----------THHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCcC--ChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCC-----------CcHHHHHHHHHH
Confidence 4679999999976432100 011344456777 68899999999997754321 123678999999
Q ss_pred HHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-----------------CCceEEEEEcCCCCCccccccc------ccc
Q 004067 628 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-----------------PDVFQCAVSGAPVTSWDGYDTF------YTE 684 (776)
Q Consensus 628 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-----------------~~~~~~~v~~~~~~~~~~~~~~------~~~ 684 (776)
++.++ ++.++++|+||||||.+++.++.++ ++.++++++.+|..++...... +..
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 183 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHH
Confidence 99887 3667999999999999999999885 7789999999998765322110 011
Q ss_pred cccCCCCC-CccchhcCChh--hhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcH
Q 004067 685 KYMGLPSE-DPVGYEYSSVM--HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 761 (776)
Q Consensus 685 ~~~~~~~~-~~~~~~~~~~~--~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 761 (776)
..++.... ........++. .....+++|+|+++|++|.++|+..+..+++.+.+.+.+++++++++++|.+.. +.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~-~~- 261 (273)
T 1vkh_A 184 LAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVY-KN- 261 (273)
T ss_dssp HHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGG-GC-
T ss_pred HHhcccccchhhcccccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccc-cC-
Confidence 11111100 00001111111 122337789999999999999999999999999999999999999999998733 33
Q ss_pred HHHHHHHHHHH
Q 004067 762 IYMEERIWEFI 772 (776)
Q Consensus 762 ~~~~~~~~~fl 772 (776)
.++.+.+.+||
T Consensus 262 ~~~~~~i~~fl 272 (273)
T 1vkh_A 262 GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHHHHHTC
T ss_pred hHHHHHHHHHc
Confidence 77788887775
No 116
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.81 E-value=3.5e-19 Score=177.22 Aligned_cols=203 Identities=19% Similarity=0.237 Sum_probs=132.4
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 634 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 634 (776)
|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+........... ..+|+.++++++.+..
T Consensus 17 ~~vvllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~----~~~d~~~~~~~l~~~~- 84 (247)
T 1tqh_A 17 RAVLLLHGFTGNSA-------DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDD----WWQDVMNGYEFLKNKG- 84 (247)
T ss_dssp CEEEEECCTTCCTH-------HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHH----HHHHHHHHHHHHHHHT-
T ss_pred cEEEEECCCCCChH-------HHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHH----HHHHHHHHHHHHHHcC-
Confidence 67899999766543 34456788888999999999999996642211000011 1345566666665543
Q ss_pred CCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEc-CCCCCcc--cc-------ccccc--------------ccccCCC
Q 004067 635 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSG-APVTSWD--GY-------DTFYT--------------EKYMGLP 690 (776)
Q Consensus 635 id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~-~~~~~~~--~~-------~~~~~--------------~~~~~~~ 690 (776)
.+++.|+||||||.+++.+|.++| ++++|+. +|..... .. ...+. ..+...+
T Consensus 85 --~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (247)
T 1tqh_A 85 --YEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTP 160 (247)
T ss_dssp --CCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSC
T ss_pred --CCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCC
Confidence 358999999999999999999998 6777654 4433110 00 00000 0000000
Q ss_pred CCCccchhc--CChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHH
Q 004067 691 SEDPVGYEY--SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 768 (776)
Q Consensus 691 ~~~~~~~~~--~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 768 (776)
......+.. .+....+.++++|+|+++|++|..+|+..+..+++.+. +...++++++++||.+.....++++.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~e~~~~~~~~~i 238 (247)
T 1tqh_A 161 MKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIE--SPVKQIKWYEQSGHVITLDQEKDQLHEDI 238 (247)
T ss_dssp CTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCC--CSSEEEEEETTCCSSGGGSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcC--CCceEEEEeCCCceeeccCccHHHHHHHH
Confidence 000000000 12234567889999999999999999998888887762 23479999999999874444578999999
Q ss_pred HHHHHHh
Q 004067 769 WEFIERT 775 (776)
Q Consensus 769 ~~fl~~~ 775 (776)
.+||++.
T Consensus 239 ~~Fl~~~ 245 (247)
T 1tqh_A 239 YAFLESL 245 (247)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999863
No 117
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.80 E-value=1.2e-18 Score=177.18 Aligned_cols=214 Identities=16% Similarity=0.196 Sum_probs=141.0
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhh
Q 004067 530 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 609 (776)
Q Consensus 530 ~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~ 609 (776)
...+|..+++..... .|.||++||.+++.. .|...+..|+++||.|+++|+||+|.|.....
T Consensus 12 ~~~~g~~l~y~~~G~---------g~~vvllHG~~~~~~-------~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-- 73 (281)
T 3fob_A 12 ENQAPIEIYYEDHGT---------GKPVVLIHGWPLSGR-------SWEYQVPALVEAGYRVITYDRRGFGKSSQPWE-- 73 (281)
T ss_dssp ETTEEEEEEEEEESS---------SEEEEEECCTTCCGG-------GGTTTHHHHHHTTEEEEEECCTTSTTSCCCSS--
T ss_pred CCCCceEEEEEECCC---------CCeEEEECCCCCcHH-------HHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcc--
Confidence 345677787776531 256889999877643 23445778889999999999999998864321
Q ss_pred hhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhh-CCCceEEEEEcCCCCCccc---------cc
Q 004067 610 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDG---------YD 679 (776)
Q Consensus 610 ~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~-~~~~~~~~v~~~~~~~~~~---------~~ 679 (776)
.+.++++.+.+..+++.- ..+++.|+||||||.+++.+++. +|++++++++.++...... ..
T Consensus 74 ------~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 145 (281)
T 3fob_A 74 ------GYEYDTFTSDLHQLLEQL--ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALD 145 (281)
T ss_dssp ------CCSHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBC
T ss_pred ------ccCHHHHHHHHHHHHHHc--CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccc
Confidence 233555555555555543 34689999999999887776665 5899999998775432100 00
Q ss_pred -c------------------cccccccCCC---CCCcc-----------------------chhcCChhhhhccCCCcEE
Q 004067 680 -T------------------FYTEKYMGLP---SEDPV-----------------------GYEYSSVMHHVHKMKGKLL 714 (776)
Q Consensus 680 -~------------------~~~~~~~~~~---~~~~~-----------------------~~~~~~~~~~~~~i~~P~l 714 (776)
. .+...+.... ....+ .+...+....+.++++|+|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~L 225 (281)
T 3fob_A 146 DATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTL 225 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEE
T ss_pred hhHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEE
Confidence 0 0000011100 00000 0011223345688899999
Q ss_pred EEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 715 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 715 ii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
+++|++|.++|++.+.+..... -.+.++++++++||.+ ..+.++++.+.+.+||+
T Consensus 226 ii~G~~D~~~p~~~~~~~~~~~---~p~~~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 226 IIHGDSDATVPFEYSGKLTHEA---IPNSKVALIKGGPHGL-NATHAKEFNEALLLFLK 280 (281)
T ss_dssp EEEETTCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTH-HHHTHHHHHHHHHHHHC
T ss_pred EEecCCCCCcCHHHHHHHHHHh---CCCceEEEeCCCCCch-hhhhHHHHHHHHHHHhh
Confidence 9999999999988664443332 3567999999999986 66788999999999985
No 118
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.80 E-value=8.6e-19 Score=178.61 Aligned_cols=220 Identities=17% Similarity=0.163 Sum_probs=146.8
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCch-
Q 004067 526 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL- 604 (776)
Q Consensus 526 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~- 604 (776)
+..+...+|.++++..+.|++ .|+||++||.+++... .|..++..| ..+|.|+++|+||+|.|..
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~~-------~~~vvllHG~~~~~~~------~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~ 69 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPVE-------GPALFVLHGGPGGNAY------VLREGLQDY-LEGFRVVYFDQRGSGRSLEL 69 (286)
T ss_dssp EEEEEECSSCEEEEEEESCTT-------SCEEEEECCTTTCCSH------HHHHHHGGG-CTTSEEEEECCTTSTTSCCC
T ss_pred ceeEEeECCEEEEEEeecCCC-------CCEEEEECCCCCcchh------HHHHHHHHh-cCCCEEEEECCCCCCCCCCC
Confidence 344455688889998887632 2689999998765320 234456666 4589999999999998864
Q ss_pred hhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc----c--
Q 004067 605 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG----Y-- 678 (776)
Q Consensus 605 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~----~-- 678 (776)
.... ..+.++++.+.+..+++.- ..+++.|+||||||.+|+.+|.++|+ ++++|+.++...+.. .
T Consensus 70 ~~~~------~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~ 140 (286)
T 2yys_A 70 PQDP------RLFTVDALVEDTLLLAEAL--GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAE 140 (286)
T ss_dssp CSCG------GGCCHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHH
T ss_pred ccCc------ccCcHHHHHHHHHHHHHHh--CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHH
Confidence 2110 0123555555555555543 34689999999999999999999999 999999988653211 0
Q ss_pred ----------ccccc------------cc--ccC---------------CCCCC--c-----cchhcCChhhhhccCCCc
Q 004067 679 ----------DTFYT------------EK--YMG---------------LPSED--P-----VGYEYSSVMHHVHKMKGK 712 (776)
Q Consensus 679 ----------~~~~~------------~~--~~~---------------~~~~~--~-----~~~~~~~~~~~~~~i~~P 712 (776)
...+. +. +.. ..... . ......+....+.++++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 220 (286)
T 2yys_A 141 AAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRP 220 (286)
T ss_dssp HTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSC
T ss_pred HhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCC
Confidence 00000 00 000 00000 0 000111223346778899
Q ss_pred EEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 713 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 713 ~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+|+++|++|..+++. +..+.+ +. +.++++++++||.. ..+.++++.+.+.+||.+.
T Consensus 221 ~lvi~G~~D~~~~~~-~~~~~~-~~----~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 221 LYVLVGERDGTSYPY-AEEVAS-RL----RAPIRVLPEAGHYL-WIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp EEEEEETTCTTTTTT-HHHHHH-HH----TCCEEEETTCCSSH-HHHCHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCCCcCCHh-HHHHHh-CC----CCCEEEeCCCCCCc-ChhhHHHHHHHHHHHHHhh
Confidence 999999999999988 888877 63 45789999999987 5567889999999999763
No 119
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.80 E-value=2.7e-19 Score=173.21 Aligned_cols=193 Identities=15% Similarity=0.048 Sum_probs=142.8
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchh--hhHHHHhCCcEEEEECCCCCCCCchhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM--RAQYLRSKGILVWKLDNRGTARRGLKFEASI 610 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~--~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~ 610 (776)
+|.+++++.+.|... ++.|+||++||++++.. .|.. ++..|+++||.|+++|+||+|.+........
T Consensus 15 ~g~~l~~~~~~p~~~----~~~~~vv~~hG~~~~~~-------~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~ 83 (210)
T 1imj_A 15 QGQALFFREALPGSG----QARFSVLLLHGIRFSSE-------TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAP 83 (210)
T ss_dssp TTEEECEEEEECSSS----CCSCEEEECCCTTCCHH-------HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSC
T ss_pred CCeEEEEEEeCCCCC----CCCceEEEECCCCCccc-------eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcch
Confidence 788999999998653 35689999999876644 2233 4778899999999999999987754321111
Q ss_pred hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCC
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP 690 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 690 (776)
.... ....++...++.+ +.++++++|||+||.+++.++.++|+.++++++.+|.....
T Consensus 84 ~~~~--~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~-------------- 141 (210)
T 1imj_A 84 IGEL--APGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK-------------- 141 (210)
T ss_dssp TTSC--CCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG--------------
T ss_pred hhhc--chHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc--------------
Confidence 1111 0124555555554 34689999999999999999999999999999988864311
Q ss_pred CCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHH
Q 004067 691 SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWE 770 (776)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 770 (776)
.....+.+++.|+++++|++|. +++.....+ +. -.+.+++++++++|.+ ..+....+.+.+.+
T Consensus 142 ----------~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~----~~~~~~~~~~~~~H~~-~~~~~~~~~~~i~~ 204 (210)
T 1imj_A 142 ----------INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQ----LPNHRVLIMKGAGHPC-YLDKPEEWHTGLLD 204 (210)
T ss_dssp ----------SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TT----SSSEEEEEETTCCTTH-HHHCHHHHHHHHHH
T ss_pred ----------ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hh----CCCCCEEEecCCCcch-hhcCHHHHHHHHHH
Confidence 0124456788999999999999 887776665 43 3568999999999986 34557788999999
Q ss_pred HHHHh
Q 004067 771 FIERT 775 (776)
Q Consensus 771 fl~~~ 775 (776)
||++.
T Consensus 205 fl~~~ 209 (210)
T 1imj_A 205 FLQGL 209 (210)
T ss_dssp HHHTC
T ss_pred HHHhc
Confidence 99763
No 120
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.80 E-value=1.1e-18 Score=176.95 Aligned_cols=213 Identities=14% Similarity=0.130 Sum_probs=142.4
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhh
Q 004067 531 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 610 (776)
Q Consensus 531 ~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~ 610 (776)
..+|..+++..+. + . |.||++||.+++.. .|..++..|+++||.|+++|+||+|.|....
T Consensus 9 ~~~g~~l~y~~~g--~------g-~pvvllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~---- 68 (277)
T 1brt_A 9 NSTSIDLYYEDHG--T------G-QPVVLIHGFPLSGH-------SWERQSAALLDAGYRVITYDRRGFGQSSQPT---- 68 (277)
T ss_dssp TTEEEEEEEEEEC--S------S-SEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS----
T ss_pred cCCCcEEEEEEcC--C------C-CeEEEECCCCCcHH-------HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCC----
Confidence 3467778777653 1 1 34899999876543 3455678899999999999999999886432
Q ss_pred hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCC-ceEEEEEcCCCCCcccc---------c-
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPVTSWDGY---------D- 679 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~~v~~~~~~~~~~~---------~- 679 (776)
..+.++++.+.+..+++.- +.+++.|+||||||.+++.+|.++|+ +++++|+.++....... .
T Consensus 69 ----~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 142 (277)
T 1brt_A 69 ----TGYDYDTFAADLNTVLETL--DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQ 142 (277)
T ss_dssp ----SCCSHHHHHHHHHHHHHHH--TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCH
T ss_pred ----CCccHHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccH
Confidence 1123444444444444332 34689999999999999999999998 99999998874321100 0
Q ss_pred cc------------------ccccccCC----C-CCCccc---h----------------h--cCChhhhhccCCCcEEE
Q 004067 680 TF------------------YTEKYMGL----P-SEDPVG---Y----------------E--YSSVMHHVHKMKGKLLL 715 (776)
Q Consensus 680 ~~------------------~~~~~~~~----~-~~~~~~---~----------------~--~~~~~~~~~~i~~P~li 715 (776)
.. +...+... . ...... + . ..+....+.++++|+|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 222 (277)
T 1brt_A 143 EFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALI 222 (277)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEE
T ss_pred HHHHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEE
Confidence 00 00000110 0 000000 0 0 11223356788899999
Q ss_pred EecCCCCccChHHH-HHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 716 VHGMIDENVHFRHT-ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 716 i~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
++|++|..+|+..+ ..+.+.+ .+.++++++++||.. ..+.++++.+.+.+||.+
T Consensus 223 i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 223 LHGTGDRTLPIENTARVFHKAL----PSAEYVEVEGAPHGL-LWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp EEETTCSSSCGGGTHHHHHHHC----TTSEEEEETTCCTTH-HHHTHHHHHHHHHHHHHC
T ss_pred EecCCCccCChHHHHHHHHHHC----CCCcEEEeCCCCcch-hhhCHHHHHHHHHHHHhC
Confidence 99999999998877 6666654 467899999999987 456788999999999863
No 121
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.80 E-value=1.1e-18 Score=181.65 Aligned_cols=228 Identities=15% Similarity=0.205 Sum_probs=144.0
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCCCCCc
Q 004067 525 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRG 603 (776)
Q Consensus 525 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~g~~~ 603 (776)
+...+.. +|.++++..+.++... .+.+.||++||++++.. .|. .....|++ .||.|+++|+||+|.|.
T Consensus 29 ~~~~v~~-~g~~l~y~~~G~~~~~---~~g~plvllHG~~~~~~---~w~----~~~~~l~~~~~~~Via~D~rG~G~S~ 97 (330)
T 3nwo_A 29 SSRTVPF-GDHETWVQVTTPENAQ---PHALPLIVLHGGPGMAH---NYV----ANIAALADETGRTVIHYDQVGCGNST 97 (330)
T ss_dssp CEEEEEE-TTEEEEEEEECCSSCC---TTCCCEEEECCTTTCCS---GGG----GGGGGHHHHHTCCEEEECCTTSTTSC
T ss_pred cceeEee-cCcEEEEEEecCccCC---CCCCcEEEECCCCCCch---hHH----HHHHHhccccCcEEEEECCCCCCCCC
Confidence 4445554 7888999999874321 11236888999877643 232 23445554 69999999999999886
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc----
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD---- 679 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~---- 679 (776)
....... ..+..+++.+.+..+++.- ..+++.|+||||||++++.+|.++|+++.++|+.++......+.
T Consensus 98 ~~~~~~~----~~~~~~~~a~dl~~ll~~l--g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 171 (330)
T 3nwo_A 98 HLPDAPA----DFWTPQLFVDEFHAVCTAL--GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAG 171 (330)
T ss_dssp CCTTSCG----GGCCHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHH
T ss_pred CCCCCcc----ccccHHHHHHHHHHHHHHc--CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHH
Confidence 4111000 0112333333333333332 34689999999999999999999999999999877654311000
Q ss_pred ---------------------c----c-------ccccccC--CCCC------------Cc---------------cchh
Q 004067 680 ---------------------T----F-------YTEKYMG--LPSE------------DP---------------VGYE 698 (776)
Q Consensus 680 ---------------------~----~-------~~~~~~~--~~~~------------~~---------------~~~~ 698 (776)
. . +...... .++. .. ....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (330)
T 3nwo_A 172 DLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLG 251 (330)
T ss_dssp HHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGG
T ss_pred HHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhcccc
Confidence 0 0 0000000 0000 00 0011
Q ss_pred cCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 699 YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 699 ~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
..+....+.++++|+|+++|++|.++| .....+.+.+ .+.+++++|++||.+ ..+.++++.+.+.+||+++
T Consensus 252 ~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~i----p~~~~~~i~~~gH~~-~~e~p~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 252 DWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHI----PDVRSHVFPGTSHCT-HLEKPEEFRAVVAQFLHQH 322 (330)
T ss_dssp GCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHC----SSEEEEEETTCCTTH-HHHSHHHHHHHHHHHHHHH
T ss_pred CCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhC----CCCcEEEeCCCCCch-hhcCHHHHHHHHHHHHHhc
Confidence 112334567889999999999999875 4455555543 678999999999977 5678899999999999864
No 122
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.80 E-value=1.3e-18 Score=170.57 Aligned_cols=185 Identities=14% Similarity=0.099 Sum_probs=138.7
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEE--CCCCCCCCchhhh--hh--hhhccCCccHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKL--DNRGTARRGLKFE--AS--IKHNCGRIDAEDQLTG 625 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~--d~rg~g~~~~~~~--~~--~~~~~~~~~~~D~~~~ 625 (776)
++.|+||++||.++... .+..++..|++ ||.|+++ |++|+|.+..... .. .... ...+..++.+.
T Consensus 36 ~~~~~vv~~HG~~~~~~-------~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~-~~~~~~~~~~~ 106 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNEL-------DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEED-LIFRTKELNEF 106 (226)
T ss_dssp TTSCEEEEECCTTCCTT-------TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHH-HHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh-------HHHHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcChhh-HHHHHHHHHHH
Confidence 35699999999876543 23445677877 9999999 8888886531000 00 0000 01124556677
Q ss_pred HHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhh
Q 004067 626 AEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHH 705 (776)
Q Consensus 626 i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (776)
++.+.++..++..+++++||||||.+++.++..+|++++++++.+|...... ...
T Consensus 107 l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------~~~ 161 (226)
T 2h1i_A 107 LDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------------------MQL 161 (226)
T ss_dssp HHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------CCC
T ss_pred HHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------ccc
Confidence 7777777767889999999999999999999999999999999998754311 001
Q ss_pred hccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 706 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 706 ~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
...++.|+|+++|+.|..+++..+..+++.+.+.+.++++ ++++++|.+ ..+....+.+||.++|
T Consensus 162 ~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~-----~~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 162 ANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQL-----TMGEVEKAKEWYDKAF 226 (226)
T ss_dssp CCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSC-----CHHHHHHHHHHHHHHC
T ss_pred ccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCC-----CHHHHHHHHHHHHHhC
Confidence 1234689999999999999999999999999888888888 999999987 2456789999999875
No 123
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.80 E-value=1.3e-18 Score=178.16 Aligned_cols=216 Identities=19% Similarity=0.198 Sum_probs=140.4
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 612 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~ 612 (776)
+|..+++..+.+. .+.|.||++||++++.. .| +.. ...+++.||.|+++|+||+|.|.... . .
T Consensus 13 ~g~~l~~~~~g~~------~~~~~vvllHG~~~~~~---~~---~~~-~~~l~~~g~~vi~~D~~G~G~S~~~~-~---~ 75 (293)
T 1mtz_A 13 NGIYIYYKLCKAP------EEKAKLMTMHGGPGMSH---DY---LLS-LRDMTKEGITVLFYDQFGCGRSEEPD-Q---S 75 (293)
T ss_dssp TTEEEEEEEECCS------SCSEEEEEECCTTTCCS---GG---GGG-GGGGGGGTEEEEEECCTTSTTSCCCC-G---G
T ss_pred CCEEEEEEEECCC------CCCCeEEEEeCCCCcch---hH---HHH-HHHHHhcCcEEEEecCCCCccCCCCC-C---C
Confidence 6788888877542 12367899999765432 12 122 23346789999999999999886432 1 0
Q ss_pred ccCCccHHHHHHHHHHHHHcC-CCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-----------c
Q 004067 613 NCGRIDAEDQLTGAEWLIKQG-LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-----------T 680 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~~-~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-----------~ 680 (776)
...++++.+.+..+++.- .+ +++.|+||||||.+++.+|.++|++++++|+.+|......+. .
T Consensus 76 ---~~~~~~~~~dl~~~~~~l~~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 150 (293)
T 1mtz_A 76 ---KFTIDYGVEEAEALRSKLFGN--EKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA 150 (293)
T ss_dssp ---GCSHHHHHHHHHHHHHHHHTT--CCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCH
T ss_pred ---cccHHHHHHHHHHHHHHhcCC--CcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCH
Confidence 122444444444443332 22 489999999999999999999999999999998875421000 0
Q ss_pred ----c---------------------ccccccC--CCCCCc--c------------------------chhcCChhhhhc
Q 004067 681 ----F---------------------YTEKYMG--LPSEDP--V------------------------GYEYSSVMHHVH 707 (776)
Q Consensus 681 ----~---------------------~~~~~~~--~~~~~~--~------------------------~~~~~~~~~~~~ 707 (776)
. +...+.. .++... . .....+....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 230 (293)
T 1mtz_A 151 KYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKIS 230 (293)
T ss_dssp HHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGG
T ss_pred HHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhc
Confidence 0 0000000 000000 0 000112233467
Q ss_pred cCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 708 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 708 ~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
++++|+|+++|++| .+++..+..+.+.+ .+.++++++++||.. ..+.++++.+.+.+||.++|
T Consensus 231 ~i~~P~lii~G~~D-~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 231 AIKIPTLITVGEYD-EVTPNVARVIHEKI----AGSELHVFRDCSHLT-MWEDREGYNKLLSDFILKHL 293 (293)
T ss_dssp GCCSCEEEEEETTC-SSCHHHHHHHHHHS----TTCEEEEETTCCSCH-HHHSHHHHHHHHHHHHHTCC
T ss_pred cCCCCEEEEeeCCC-CCCHHHHHHHHHhC----CCceEEEeCCCCCCc-cccCHHHHHHHHHHHHHhcC
Confidence 78899999999999 67777777776654 457999999999987 45678899999999998765
No 124
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.80 E-value=2.1e-18 Score=176.98 Aligned_cols=214 Identities=16% Similarity=0.143 Sum_probs=142.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchh-hhHHHHhCCcEEEEECCCCCCCCchhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRSKGILVWKLDNRGTARRGLKFEASI 610 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~ 610 (776)
.+|.++++..+.+.+ .|.||++||.+++.. . |.. ++..|+++||.|+++|+||+|.|......
T Consensus 8 ~~g~~l~y~~~G~~~-------~~~vvllHG~~~~~~---~----w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~-- 71 (298)
T 1q0r_A 8 SGDVELWSDDFGDPA-------DPALLLVMGGNLSAL---G----WPDEFARRLADGGLHVIRYDHRDTGRSTTRDFA-- 71 (298)
T ss_dssp ETTEEEEEEEESCTT-------SCEEEEECCTTCCGG---G----SCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTT--
T ss_pred cCCeEEEEEeccCCC-------CCeEEEEcCCCCCcc---c----hHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCC--
Confidence 478889988876532 268999999876543 2 332 35788999999999999999998641000
Q ss_pred hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC-Cc--c-----------
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT-SW--D----------- 676 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~-~~--~----------- 676 (776)
...+.++++.+.+..+++.- +.+++.++||||||.+++.+|.++|++++++|+.++.. .. .
T Consensus 72 ---~~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 146 (298)
T 1q0r_A 72 ---AHPYGFGELAADAVAVLDGW--GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEP 146 (298)
T ss_dssp ---TSCCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCC
T ss_pred ---cCCcCHHHHHHHHHHHHHHh--CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhh
Confidence 01234555555555555543 34689999999999999999999999999999877644 20 0
Q ss_pred ---ccc----c----ccc------------cc------cc-C--CCCC--------------------C-ccchh---cC
Q 004067 677 ---GYD----T----FYT------------EK------YM-G--LPSE--------------------D-PVGYE---YS 700 (776)
Q Consensus 677 ---~~~----~----~~~------------~~------~~-~--~~~~--------------------~-~~~~~---~~ 700 (776)
... . ... .. .. . .+.. . ...+. ..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (298)
T 1q0r_A 147 TLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPP 226 (298)
T ss_dssp CSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCC
T ss_pred hhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCc
Confidence 000 0 000 00 00 0 0000 0 00000 11
Q ss_pred Chhhh-hccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 701 SVMHH-VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 701 ~~~~~-~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+.... +.++++|+|+++|++|..+|+..+..+.+.+ .+.++++++++|| +..+++.+.+.+||.++
T Consensus 227 ~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~gH-----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 227 PSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI----PTARLAEIPGMGH-----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp GGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS----TTEEEEEETTCCS-----SCCGGGHHHHHHHHHHH
T ss_pred ccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhC----CCCEEEEcCCCCC-----CCcHHHHHHHHHHHHHH
Confidence 12234 7788999999999999999988887776654 5689999999999 23467788999999765
No 125
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.80 E-value=1e-18 Score=180.89 Aligned_cols=218 Identities=16% Similarity=0.115 Sum_probs=149.7
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+...++. +|..+++..+.+ .|+||++||.+++.. .|..++..|++ +|.|+++|+||+|.+.
T Consensus 48 ~~~~~~~~-~~~~~~~~~~g~---------~p~vv~lhG~~~~~~-------~~~~~~~~L~~-~~~v~~~D~~G~G~S~ 109 (314)
T 3kxp_A 48 FISRRVDI-GRITLNVREKGS---------GPLMLFFHGITSNSA-------VFEPLMIRLSD-RFTTIAVDQRGHGLSD 109 (314)
T ss_dssp CEEEEEEC-SSCEEEEEEECC---------SSEEEEECCTTCCGG-------GGHHHHHTTTT-TSEEEEECCTTSTTSC
T ss_pred cceeeEEE-CCEEEEEEecCC---------CCEEEEECCCCCCHH-------HHHHHHHHHHc-CCeEEEEeCCCcCCCC
Confidence 34444554 777788776643 378999999876543 23445666766 6999999999999886
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccc---
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT--- 680 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~--- 680 (776)
... .....+++.+.+..+++.. +.++++++||||||.+++.++.++|++++++|+.+|...+.....
T Consensus 110 ~~~--------~~~~~~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (314)
T 3kxp_A 110 KPE--------TGYEANDYADDIAGLIRTL--ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDAL 179 (314)
T ss_dssp CCS--------SCCSHHHHHHHHHHHHHHH--TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHH
T ss_pred CCC--------CCCCHHHHHHHHHHHHHHh--CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHH
Confidence 221 1234566666666665543 336999999999999999999999999999999987654221000
Q ss_pred -------------------cccccccCCCCCCccc---------------------------hhcCChhhhhccCCCcEE
Q 004067 681 -------------------FYTEKYMGLPSEDPVG---------------------------YEYSSVMHHVHKMKGKLL 714 (776)
Q Consensus 681 -------------------~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~i~~P~l 714 (776)
.+...+...+...... ....+....+.++++|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 259 (314)
T 3kxp_A 180 EARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVL 259 (314)
T ss_dssp HHHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEE
T ss_pred HHHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEE
Confidence 0000000000000000 000034455678899999
Q ss_pred EEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 715 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 715 ii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
+++|++|..+++..+..+.+.+ .++++++++++||.+ ..+..+.+.+.+.+||++
T Consensus 260 ii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~g~gH~~-~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 260 IVRGESSKLVSAAALAKTSRLR----PDLPVVVVPGADHYV-NEVSPEITLKAITNFIDA 314 (314)
T ss_dssp EEEETTCSSSCHHHHHHHHHHC----TTSCEEEETTCCSCH-HHHCHHHHHHHHHHHHHC
T ss_pred EEecCCCccCCHHHHHHHHHhC----CCceEEEcCCCCCcc-hhhCHHHHHHHHHHHHhC
Confidence 9999999999999888888765 457899999999987 556678899999999974
No 126
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.80 E-value=3.8e-17 Score=185.46 Aligned_cols=316 Identities=11% Similarity=0.076 Sum_probs=203.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCce-EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQ-ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
+..++|||||++|++.+. ..|++|++.+++. +.+..|. ..+....|||
T Consensus 21 ~~~~~~spdg~~l~~~~~------~~v~l~~~~~~~~~~~~~~h~------------------------~~v~~~~~sp- 69 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCNG------TSVYTVPVGSLTDTEIYTEHS------------------------HQTTVAKTSP- 69 (611)
T ss_dssp CCCCEECTTSSEEEEEET------TEEEEEETTCSSCCEEECCCS------------------------SCEEEEEECT-
T ss_pred eeEEeeCCCCCEEEeCCC------CEEEEecCCCcccCeEecCCC------------------------CceEEEEECC-
Confidence 478899999999998753 3699999987655 4444432 3688999999
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCccc--eecCCCCCCCccCceeCCCCCEEEEEECC-----cEEEEecCCCcee-EEe
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSKPE--LKLSSSSCSPVIDPHLSSDGTMIAFVRDC-----ELHVLNLLINEQR-QLT 206 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~SpDg~~la~~~~~-----~l~~~~l~~g~~~-~lt 206 (776)
||++|+.. .++.|.+||+.+++.. ..+.... ..+..++|||||+.|+..... .|++|+. ++.. .+.
T Consensus 70 --dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~-~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~ 144 (611)
T 1nr0_A 70 --SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFS-GPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLT 144 (611)
T ss_dssp --TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSS-SCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCC
T ss_pred --CCcEEEEEeCCCCEEEeECCCCcceeeEeecccC-CceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceec
Confidence 99999987 6788999999765443 1233333 348889999999999988754 4777763 3321 111
Q ss_pred eCCCCCceecCCcccceecccCCcceEEECCCCCe-EEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 207 HGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKF-IAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
+.. ..+..+.|+||++. |+..+.| .
T Consensus 145 ----------gh~--------~~v~~v~f~p~~~~~l~s~s~D------------------------------------~ 170 (611)
T 1nr0_A 145 ----------GQA--------RAMNSVDFKPSRPFRIISGSDD------------------------------------N 170 (611)
T ss_dssp ----------CCS--------SCEEEEEECSSSSCEEEEEETT------------------------------------S
T ss_pred ----------CCC--------CCceEEEECCCCCeEEEEEeCC------------------------------------C
Confidence 111 12558899999985 6655533 2
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE--------e
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV--------E 357 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~--------~ 357 (776)
.+.+||..+++.... + ..+...+..++|||||+.|+..+ .+..|.+||+.+++...... +
T Consensus 171 ~v~lwd~~~~~~~~~-l-------~~H~~~V~~v~fspdg~~las~s----~D~~i~lwd~~~g~~~~~~~~~~~~~~~h 238 (611)
T 1nr0_A 171 TVAIFEGPPFKFKST-F-------GEHTKFVHSVRYNPDGSLFASTG----GDGTIVLYNGVDGTKTGVFEDDSLKNVAH 238 (611)
T ss_dssp CEEEEETTTBEEEEE-E-------CCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCCEEEECBCTTSSSCSS
T ss_pred eEEEEECCCCeEeee-e-------ccccCceEEEEECCCCCEEEEEE----CCCcEEEEECCCCcEeeeecccccccccc
Confidence 378899887765432 1 46777899999999999887765 45569999998887654432 1
Q ss_pred ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccC---CeEEEEEEeecCCCcEEEEEEc
Q 004067 358 ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEG---DWMVEQIVGVNEASGQVYFTGT 433 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~---~~~~~~~~~~s~dg~~i~~~~~ 433 (776)
....+. -.|+| ++.++++...++ .|.+||+.+++. ..+..+ ........ | +++.++..+
T Consensus 239 ~~~V~~---v~~sp--------dg~~l~s~s~D~--~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~l~s~s- 301 (611)
T 1nr0_A 239 SGSVFG---LTWSP--------DGTKIASASADK--TIKIWNVATLKVEKTIPVGTRIEDQQLGII-W--TKQALVSIS- 301 (611)
T ss_dssp SSCEEE---EEECT--------TSSEEEEEETTS--EEEEEETTTTEEEEEEECCSSGGGCEEEEE-E--CSSCEEEEE-
T ss_pred CCCEEE---EEECC--------CCCEEEEEeCCC--eEEEEeCCCCceeeeecCCCCccceeEEEE-E--cCCEEEEEe-
Confidence 111111 11323 234566666677 899999886653 333221 11122222 4 566544444
Q ss_pred cCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 004067 434 LDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 504 (776)
Q Consensus 434 ~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~ 504 (776)
.++. +.+|... .+. ....+..+. .+..++|||||++|+..... ..|.+||..++...+
T Consensus 302 ~d~~--i~~~~~~---~~~----~~~~~~gh~~~v~~l~~spdg~~l~s~s~D----~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 302 ANGF--INFVNPE---LGS----IDQVRYGHNKAITALSSSADGKTLFSADAE----GHINSWDISTGISNR 360 (611)
T ss_dssp TTCC--EEEEETT---TTE----EEEEECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCEEE
T ss_pred CCCc--EEEEeCC---CCC----cceEEcCCCCCEEEEEEeCCCCEEEEEeCC----CcEEEEECCCCceee
Confidence 3332 5666532 221 233444443 46788999999988766433 359999998887544
No 127
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=1.4e-16 Score=167.57 Aligned_cols=277 Identities=11% Similarity=0.064 Sum_probs=182.2
Q ss_pred cCCCceeEcCCCCEEEEEeCCCC--cCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 55 VAPTSIGFSPDDNLITYLLSPDH--SLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 55 ~~~~~~~~SpDG~~ia~~~~~~~--~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
..+..++|||||++|+....... .....|+++|+++++....... +.......|
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------------------------~~~~~~~~~ 96 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN------------------------DLKPFGATI 96 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE------------------------SSCCCSEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec------------------------CCCcceEEE
Confidence 34578999999999977664321 1135899999999887555432 124567889
Q ss_pred eecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCC--------ccCceeCCCCCEEEEEE---CCcEEEEecCC
Q 004067 133 VKTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSP--------VIDPHLSSDGTMIAFVR---DCELHVLNLLI 199 (776)
Q Consensus 133 sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~--------~~~~~~SpDg~~la~~~---~~~l~~~~l~~ 199 (776)
+| ||+++++. .++.|++||+.+++....+....... ...+.|||||+.+++.. ++.|+++|+++
T Consensus 97 s~---dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 97 NN---TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp ET---TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT
T ss_pred CC---CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC
Confidence 99 99988876 45789999999988753443322111 35579999999987776 34699999999
Q ss_pred CceeEEee-CCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCC
Q 004067 200 NEQRQLTH-GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 278 (776)
Q Consensus 200 g~~~~lt~-~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (776)
++...... .+.. ...++|+|||+.|++...+
T Consensus 174 ~~~~~~~~~~~~~------------------~~~~~~s~dg~~l~~~~~~------------------------------ 205 (353)
T 3vgz_A 174 IKLKTAIQNTGKM------------------STGLALDSEGKRLYTTNAD------------------------------ 205 (353)
T ss_dssp TEEEEEECCCCTT------------------CCCCEEETTTTEEEEECTT------------------------------
T ss_pred CceEEEecCCCCc------------------cceEEECCCCCEEEEEcCC------------------------------
Confidence 88765543 2211 3367899999988765421
Q ss_pred CCCCCeEEEEEEEcCCCceEEE-EcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEe
Q 004067 279 GASNVKVRLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 357 (776)
Q Consensus 279 g~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 357 (776)
..|++||+.+++.... .... .........++|+|||+.++.... ....|++||+++++.......
T Consensus 206 ------~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~dg~~l~~~~~---~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 206 ------GELITIDTADNKILSRKKLLD-----DGKEHFFINISLDTARQRAFITDS---KAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp ------SEEEEEETTTTEEEEEEECCC-----SSSCCCEEEEEEETTTTEEEEEES---SSSEEEEEETTTCCEEEEEEC
T ss_pred ------CeEEEEECCCCeEEEEEEcCC-----CCCCcccceEEECCCCCEEEEEeC---CCCEEEEEECCCCcEEEEEEc
Confidence 3578999998876543 2210 123445677999999997766542 335699999999886554432
Q ss_pred ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEcc
Q 004067 358 ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 434 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~ 434 (776)
..+ ..-.|+| +++.+++....++ .|++||+++++.............+ .|++||++||+....
T Consensus 272 ~~~----~~~~~s~-------dg~~l~v~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 272 PES----LAVLFNP-------ARNEAYVTHRQAG--KVSVIDAKSYKVVKTFDTPTHPNSL-ALSADGKTLYVSVKQ 334 (353)
T ss_dssp SSC----CCEEEET-------TTTEEEEEETTTT--EEEEEETTTTEEEEEEECCSEEEEE-EECTTSCEEEEEEEC
T ss_pred CCC----ceEEECC-------CCCEEEEEECCCC--eEEEEECCCCeEEEEEecCCCCCeE-EEcCCCCEEEEEEcc
Confidence 211 0111222 2333444444455 8999999877654433333344444 499999988887654
No 128
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.79 E-value=2.3e-18 Score=177.43 Aligned_cols=221 Identities=13% Similarity=0.081 Sum_probs=149.2
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCC-CCC
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARR 602 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~-g~~ 602 (776)
.+...++. ++..+.++.+.+. ..|+||++||++++.. .|..++..|++ ||.|+++|+||+ |.+
T Consensus 45 ~~~~~v~~-~~~~~~~~~~g~~-------~~~~vv~lHG~~~~~~-------~~~~~~~~L~~-g~~vi~~D~~G~gG~s 108 (306)
T 2r11_A 45 CKSFYIST-RFGQTHVIASGPE-------DAPPLVLLHGALFSST-------MWYPNIADWSS-KYRTYAVDIIGDKNKS 108 (306)
T ss_dssp CEEEEECC-TTEEEEEEEESCT-------TSCEEEEECCTTTCGG-------GGTTTHHHHHH-HSEEEEECCTTSSSSC
T ss_pred cceEEEec-CCceEEEEeeCCC-------CCCeEEEECCCCCCHH-------HHHHHHHHHhc-CCEEEEecCCCCCCCC
Confidence 45556665 4556777776542 2378999999876644 23345677877 999999999999 655
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc-
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF- 681 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~- 681 (776)
.... ......++.+.+..+++.. +.+++.|+||||||.+++.+|.++|++++++|+.+|..........
T Consensus 109 ~~~~--------~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (306)
T 2r11_A 109 IPEN--------VSGTRTDYANWLLDVFDNL--GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDF 178 (306)
T ss_dssp EECS--------CCCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHH
T ss_pred CCCC--------CCCCHHHHHHHHHHHHHhc--CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHH
Confidence 4311 1234566666666665543 3468999999999999999999999999999999987653211000
Q ss_pred ---------------ccccccCCCCCC------------------------ccchhcCChhhhhccCCCcEEEEecCCCC
Q 004067 682 ---------------YTEKYMGLPSED------------------------PVGYEYSSVMHHVHKMKGKLLLVHGMIDE 722 (776)
Q Consensus 682 ---------------~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 722 (776)
+..+........ ............+.++++|+|+++|++|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 258 (306)
T 2r11_A 179 YKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEV 258 (306)
T ss_dssp HHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCC
T ss_pred HHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCc
Confidence 000000000000 00000112344577889999999999999
Q ss_pred ccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 723 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 723 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
.+++..+.++++.+ ..++++++++++||.+ ..+...++.+.+.+||++
T Consensus 259 ~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 259 IYDPHSALHRASSF---VPDIEAEVIKNAGHVL-SMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp SSCHHHHHHHHHHH---STTCEEEEETTCCTTH-HHHSHHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHH---CCCCEEEEeCCCCCCC-cccCHHHHHHHHHHHHhC
Confidence 99988777666544 3567999999999976 455678899999999853
No 129
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.79 E-value=8e-19 Score=176.82 Aligned_cols=214 Identities=14% Similarity=0.120 Sum_probs=145.5
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.+|..+++..+.+.+ .+.|+||++||.+++.. .|..++..|++ +|.|+++|+||+|.|....
T Consensus 9 ~~g~~l~y~~~g~~~-----~~~~~vvllHG~~~~~~-------~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~----- 70 (266)
T 2xua_A 9 VNGTELHYRIDGERH-----GNAPWIVLSNSLGTDLS-------MWAPQVAALSK-HFRVLRYDTRGHGHSEAPK----- 70 (266)
T ss_dssp CSSSEEEEEEESCSS-----SCCCEEEEECCTTCCGG-------GGGGGHHHHHT-TSEEEEECCTTSTTSCCCS-----
T ss_pred ECCEEEEEEEcCCcc-----CCCCeEEEecCccCCHH-------HHHHHHHHHhc-CeEEEEecCCCCCCCCCCC-----
Confidence 378889999887533 12478999999766543 34445777765 5999999999999886421
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc---ccc--------
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---YDT-------- 680 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~---~~~-------- 680 (776)
....++++.+.+..+++.- ..+++.++||||||.+++.+|.++|++++++|+.++...... +..
T Consensus 71 ---~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 145 (266)
T 2xua_A 71 ---GPYTIEQLTGDVLGLMDTL--KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTE 145 (266)
T ss_dssp ---SCCCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHhc--CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhc
Confidence 1123555555555555443 345899999999999999999999999999999877543210 000
Q ss_pred ----c---ccccccC------CCC-----------CCccc-------hhcCChhhhhccCCCcEEEEecCCCCccChHHH
Q 004067 681 ----F---YTEKYMG------LPS-----------EDPVG-------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 729 (776)
Q Consensus 681 ----~---~~~~~~~------~~~-----------~~~~~-------~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~ 729 (776)
. ....+.. .+. ..... +...+....+.++++|+|+++|++|..+++..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 225 (266)
T 2xua_A 146 GMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQG 225 (266)
T ss_dssp CHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHH
T ss_pred ChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHH
Confidence 0 0000000 000 00000 011223345678899999999999999999888
Q ss_pred HHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 730 ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 730 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
..+.+.+ .+.++++++ +||.+ ..+.++++.+.+.+||.+
T Consensus 226 ~~~~~~~----~~~~~~~~~-~gH~~-~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 226 RELAQAI----AGARYVELD-ASHIS-NIERADAFTKTVVDFLTE 264 (266)
T ss_dssp HHHHHHS----TTCEEEEES-CCSSH-HHHTHHHHHHHHHHHHTC
T ss_pred HHHHHhC----CCCEEEEec-CCCCc-hhcCHHHHHHHHHHHHHh
Confidence 7777665 456899999 99987 455688899999999864
No 130
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.79 E-value=1e-18 Score=181.54 Aligned_cols=212 Identities=10% Similarity=-0.039 Sum_probs=145.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHH-hCCcEEEEECCCCCCCCchhhhhhhhhccC
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCG 615 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~ 615 (776)
+.++++.|.. ++.|+||++|||+....... .+..++..|+ +.||.|+++|+||.+.....
T Consensus 84 ~~~~~~~p~~-----~~~p~vv~lHGgg~~~~~~~----~~~~~~~~la~~~g~~vi~~D~r~~~~~~~~---------- 144 (326)
T 3d7r_A 84 MQVFRFNFRH-----QIDKKILYIHGGFNALQPSP----FHWRLLDKITLSTLYEVVLPIYPKTPEFHID---------- 144 (326)
T ss_dssp EEEEEEESTT-----CCSSEEEEECCSTTTSCCCH----HHHHHHHHHHHHHCSEEEEECCCCTTTSCHH----------
T ss_pred EEEEEEeeCC-----CCCeEEEEECCCcccCCCCH----HHHHHHHHHHHHhCCEEEEEeCCCCCCCCch----------
Confidence 6677788865 34589999999764321111 2233455565 56999999999987643211
Q ss_pred CccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCc----eEEEEEcCCCCCccccccccc--------
Q 004067 616 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTSWDGYDTFYT-------- 683 (776)
Q Consensus 616 ~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~----~~~~v~~~~~~~~~~~~~~~~-------- 683 (776)
..++|+.++++++.++ ++.++++|+||||||.+|+.++.++|+. ++++|+.+|..+.......+.
T Consensus 145 -~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 221 (326)
T 3d7r_A 145 -DTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDA 221 (326)
T ss_dssp -HHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCS
T ss_pred -HHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCc
Confidence 1268899999999887 4778999999999999999999887665 899999999876432111111
Q ss_pred -----------ccccCCCCCCccchhcCChhhh-hccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCC
Q 004067 684 -----------EKYMGLPSEDPVGYEYSSVMHH-VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 751 (776)
Q Consensus 684 -----------~~~~~~~~~~~~~~~~~~~~~~-~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 751 (776)
..+.+.... .....+++.. +.. .+|+|+++|++|.. ...+..+.+++.+.+.++++++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~P~lii~G~~D~~--~~~~~~~~~~l~~~~~~~~~~~~~g~ 295 (326)
T 3d7r_A 222 VLSQFGVNEIMKKWANGLPL---TDKRISPINGTIEG-LPPVYMFGGGREMT--HPDMKLFEQMMLQHHQYIEFYDYPKM 295 (326)
T ss_dssp SCCHHHHHHHHHHHHTTSCT---TSTTTSGGGSCCTT-CCCEEEEEETTSTT--HHHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred ccCHHHHHHHHHHhcCCCCC---CCCeECcccCCccc-CCCEEEEEeCcccc--hHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 001100000 0001122211 111 25999999999963 45678888999999999999999999
Q ss_pred CCCCCC--CCcHHHHHHHHHHHHHHhC
Q 004067 752 RHMPRR--HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 752 ~H~~~~--~~~~~~~~~~~~~fl~~~l 776 (776)
+|.+.. .+...++.+.+.+||++++
T Consensus 296 ~H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 296 VHDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp CTTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHh
Confidence 998743 3567789999999998764
No 131
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.79 E-value=2.1e-18 Score=161.70 Aligned_cols=174 Identities=16% Similarity=0.026 Sum_probs=131.0
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
++.|+||++||..++.. .| .+..+++.|+++||.|+++|+||+|.+..... .....+++..+++++.+
T Consensus 2 ~~~~~vv~~HG~~~~~~---~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-------~~~~~~~~~~~~~~~~~ 69 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPD---AL--KVTALAEVAERLGWTHERPDFTDLDARRDLGQ-------LGDVRGRLQRLLEIARA 69 (176)
T ss_dssp CSSCEEEEECCTTCCTT---SH--HHHHHHHHHHHTTCEEECCCCHHHHTCGGGCT-------TCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCcc---HH--HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-------CCCHHHHHHHHHHHHHh
Confidence 35689999999765432 12 12346788999999999999999887642210 01113344555666665
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCC
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKG 711 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 711 (776)
.. +.++++++||||||.+++.++.++| ++++++.+|......+. ...+++.
T Consensus 70 ~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~-------------------------~~~~~~~ 120 (176)
T 2qjw_A 70 AT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP-------------------------ALDAAAV 120 (176)
T ss_dssp HH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC-------------------------CCCCCSS
T ss_pred cC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccC-------------------------cccccCC
Confidence 53 3479999999999999999999988 89999988876532110 0456779
Q ss_pred cEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 712 KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 712 P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
|+|+++|++|..+++..+.++++.+ +++++++ +++|.+ .+...++.+.+.+||++
T Consensus 121 P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~-~~~H~~--~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 121 PISIVHAWHDELIPAADVIAWAQAR-----SARLLLV-DDGHRL--GAHVQAASRAFAELLQS 175 (176)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEE-SSCTTC--TTCHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCccCHHHHHHHHHhC-----CceEEEe-CCCccc--cccHHHHHHHHHHHHHh
Confidence 9999999999999999999998876 4688888 899987 36788899999999875
No 132
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.79 E-value=3e-18 Score=177.90 Aligned_cols=204 Identities=19% Similarity=0.188 Sum_probs=145.4
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCccccccccccc---chhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh-
Q 004067 536 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINT---VDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK- 611 (776)
Q Consensus 536 ~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~---~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~- 611 (776)
.+++..+.|.+. +.|+||++||++.+.. .|... ...++..|+++||.|+++|+||+|.+.........
T Consensus 49 ~~~~~~~~p~~~-----~~~~vvl~HG~g~~~~---~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~ 120 (328)
T 1qlw_A 49 QMYVRYQIPQRA-----KRYPITLIHGCCLTGM---TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAV 120 (328)
T ss_dssp CEEEEEEEETTC-----CSSCEEEECCTTCCGG---GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHH
T ss_pred eEEEEEEccCCC-----CCccEEEEeCCCCCCC---ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccc
Confidence 366667777652 3367999999875543 23210 01257889999999999999999988654221100
Q ss_pred ------------------------hccC----C---------ccHHH------------------HHHHHHHHHHcCCCC
Q 004067 612 ------------------------HNCG----R---------IDAED------------------QLTGAEWLIKQGLAK 636 (776)
Q Consensus 612 ------------------------~~~~----~---------~~~~D------------------~~~~i~~l~~~~~id 636 (776)
..++ . ..+++ +.+++..+.++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--- 197 (328)
T 1qlw_A 121 KLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL--- 197 (328)
T ss_dssp HTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH---
T ss_pred cccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh---
Confidence 0000 0 00112 455555555442
Q ss_pred CCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEE
Q 004067 637 VGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLV 716 (776)
Q Consensus 637 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 716 (776)
++++++||||||.+++.++.++|++++++|+.+|... . ........+++|+|++
T Consensus 198 -~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~--------------~-----------~~~~~~~~~~~PvLii 251 (328)
T 1qlw_A 198 -DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC--------------P-----------KPEDVKPLTSIPVLVV 251 (328)
T ss_dssp -TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC--------------C-----------CGGGCGGGTTSCEEEE
T ss_pred -CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC--------------C-----------CHHHHhhccCCCEEEE
Confidence 3899999999999999999999999999999887531 0 0111123356899999
Q ss_pred ecCCCCccCh-----HHHHHHHHHHHHCCCCeEEEEecCCC-----CCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 717 HGMIDENVHF-----RHTARLINALVAARKPYEILIFPDER-----HMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 717 ~G~~D~~v~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~-----H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+|++|..+++ +.+..+++.+.+.+.++++++++++| |.+....+..++.+.+.+||++++
T Consensus 252 ~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 252 FGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp ECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred eccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence 9999999997 88999999999988999999999665 987555558899999999998864
No 133
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.79 E-value=2.2e-18 Score=174.48 Aligned_cols=217 Identities=13% Similarity=0.100 Sum_probs=146.5
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCch
Q 004067 525 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 604 (776)
Q Consensus 525 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~ 604 (776)
+...+.. +|.++++.... +.|+||++||.+++.. . |..++..|++ ||.|+++|+||+|.+..
T Consensus 4 ~~~~~~~-~~~~~~y~~~g---------~~~~vv~~HG~~~~~~---~----~~~~~~~L~~-~~~vi~~d~~G~G~s~~ 65 (278)
T 3oos_A 4 TTNIIKT-PRGKFEYFLKG---------EGPPLCVTHLYSEYND---N----GNTFANPFTD-HYSVYLVNLKGCGNSDS 65 (278)
T ss_dssp EEEEEEE-TTEEEEEEEEC---------SSSEEEECCSSEECCT---T----CCTTTGGGGG-TSEEEEECCTTSTTSCC
T ss_pred ccCcEec-CCceEEEEecC---------CCCeEEEEcCCCcchH---H----HHHHHHHhhc-CceEEEEcCCCCCCCCC
Confidence 4444555 56677776543 2368999999776543 2 3334667777 99999999999998864
Q ss_pred hhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccc----
Q 004067 605 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT---- 680 (776)
Q Consensus 605 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~---- 680 (776)
.... .....+++.+.+..+++.. +.+++.++||||||.+++.++.++|++++++++.+|.........
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~~~~l--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 137 (278)
T 3oos_A 66 AKND------SEYSMTETIKDLEAIREAL--YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSI 137 (278)
T ss_dssp CSSG------GGGSHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTST
T ss_pred CCCc------ccCcHHHHHHHHHHHHHHh--CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchh
Confidence 3211 1123566666666666553 445899999999999999999999999999999988765110000
Q ss_pred -------------cc------------------------------cccccCCCCCCc-----------cchhcCChhhhh
Q 004067 681 -------------FY------------------------------TEKYMGLPSEDP-----------VGYEYSSVMHHV 706 (776)
Q Consensus 681 -------------~~------------------------------~~~~~~~~~~~~-----------~~~~~~~~~~~~ 706 (776)
.. ...+...+.... ..+...+....+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (278)
T 3oos_A 138 YCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKL 217 (278)
T ss_dssp TSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHH
T ss_pred hhhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHH
Confidence 00 000001111000 011233344567
Q ss_pred ccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 004067 707 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 772 (776)
Q Consensus 707 ~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 772 (776)
.++++|+|+++|++|..+++..+..+.+.+ .++++++++++||.+ ..+.++++.+.+.+||
T Consensus 218 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 218 KFVKIPSFIYCGKHDVQCPYIFSCEIANLI----PNATLTKFEESNHNP-FVEEIDKFNQFVNDTL 278 (278)
T ss_dssp TTCCSCEEEEEETTCSSSCHHHHHHHHHHS----TTEEEEEETTCSSCH-HHHSHHHHHHHHHHTC
T ss_pred hCCCCCEEEEEeccCCCCCHHHHHHHHhhC----CCcEEEEcCCcCCCc-ccccHHHHHHHHHhhC
Confidence 788999999999999999998888888765 568999999999986 4456777777777664
No 134
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.79 E-value=4.8e-18 Score=170.49 Aligned_cols=209 Identities=15% Similarity=0.129 Sum_probs=146.4
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhh
Q 004067 528 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 607 (776)
Q Consensus 528 ~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~ 607 (776)
.+...+|.++++..+.+ .|+||++||.+++.. .|..++..|+ .||.|+++|+||+|.+....
T Consensus 6 ~~~~~~g~~l~~~~~g~---------~~~vv~lHG~~~~~~-------~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~- 67 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSGS---------GPPVVLVGGALSTRA-------GGAPLAERLA-PHFTVICYDRRGRGDSGDTP- 67 (262)
T ss_dssp EEECTTSCEEEEEEEEC---------SSEEEEECCTTCCGG-------GGHHHHHHHT-TTSEEEEECCTTSTTCCCCS-
T ss_pred eEEcCCCcEEEEEEcCC---------CCcEEEECCCCcChH-------HHHHHHHHHh-cCcEEEEEecCCCcCCCCCC-
Confidence 35667898898887642 267999999877654 2445577777 89999999999999886431
Q ss_pred hhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccc-------
Q 004067 608 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT------- 680 (776)
Q Consensus 608 ~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~------- 680 (776)
...++++.+.+..+++.. + .++.++||||||.+++.++.++| +++++++.+|.........
T Consensus 68 --------~~~~~~~~~~~~~~~~~l--~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~ 135 (262)
T 3r0v_A 68 --------PYAVEREIEDLAAIIDAA--G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQ 135 (262)
T ss_dssp --------SCCHHHHHHHHHHHHHHT--T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHH
T ss_pred --------CCCHHHHHHHHHHHHHhc--C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHH
Confidence 234566666666665543 3 69999999999999999999999 9999999887654221000
Q ss_pred -----------------cccccccCCCCCCccch------------------------hcCChhhhhccCCCcEEEEecC
Q 004067 681 -----------------FYTEKYMGLPSEDPVGY------------------------EYSSVMHHVHKMKGKLLLVHGM 719 (776)
Q Consensus 681 -----------------~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~i~~P~lii~G~ 719 (776)
.+.......+......+ ........+.++++|+|+++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 215 (262)
T 3r0v_A 136 TRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGG 215 (262)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECT
T ss_pred HHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeec
Confidence 00000001110000000 0112345677889999999999
Q ss_pred CCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 720 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 720 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
+|..++++....+.+.+ .+.++++++++||. +.++++.+.+.+||++
T Consensus 216 ~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~----~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 216 ASPAWIRHTAQELADTI----PNARYVTLENQTHT----VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp TCCHHHHHHHHHHHHHS----TTEEEEECCCSSSS----CCHHHHHHHHHHHHC-
T ss_pred CCCCCCHHHHHHHHHhC----CCCeEEEecCCCcc----cCHHHHHHHHHHHHhC
Confidence 99999988888887765 56799999999993 3688899999999863
No 135
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.79 E-value=1.3e-18 Score=185.13 Aligned_cols=245 Identities=15% Similarity=0.097 Sum_probs=157.8
Q ss_pred eEEEEEcCCCcEE----EEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccc------cccchhhh---HHHHhCCcEE
Q 004067 525 DIVQIQANDGTVL----YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW------INTVDMRA---QYLRSKGILV 591 (776)
Q Consensus 525 ~~~~~~~~dg~~l----~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~------~~~~~~~~---~~l~~~G~~v 591 (776)
+...++..+|..+ ++..+.+.+. .+.|+||++||.+++......+ ...|..++ ..|...||.|
T Consensus 13 ~~~~~~~~~g~~l~~~i~y~~~g~~~~----~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~v 88 (377)
T 3i1i_A 13 ILKEYTFENGRTIPVQMGYETYGTLNR----ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFV 88 (377)
T ss_dssp EEEEEECTTSCEEEEEEEEEEESCCCT----TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEE
T ss_pred eecceeecCCCEeeeeEEEEeecccCC----CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEE
Confidence 3445666666544 5555654332 3458999999987764421000 00122233 5667889999
Q ss_pred EEECCCCCCCCc--------hhhhhhh-----hhccCCccHHHHHHHHHHHHHcCCCCCCcEE-EEeechHHHHHHHHHh
Q 004067 592 WKLDNRGTARRG--------LKFEASI-----KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIG-LYGWSYGGYLSAITLA 657 (776)
Q Consensus 592 ~~~d~rg~g~~~--------~~~~~~~-----~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~-l~G~S~GG~~a~~~a~ 657 (776)
+++|+||+|.|. ....... ...+..+.++|+.+.+..+++.. +.+++. |+||||||.+++.+|.
T Consensus 89 i~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l--~~~~~~ilvGhS~Gg~ia~~~a~ 166 (377)
T 3i1i_A 89 ICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDM--GIARLHAVMGPSAGGMIAQQWAV 166 (377)
T ss_dssp EEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT--TCCCBSEEEEETHHHHHHHHHHH
T ss_pred EEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHc--CCCcEeeEEeeCHhHHHHHHHHH
Confidence 999999996532 1000000 01122346788888888777654 345775 9999999999999999
Q ss_pred hCCCceEEEEE-cCCCCCcccc--------------cc-------------------------------cccccccCCCC
Q 004067 658 RFPDVFQCAVS-GAPVTSWDGY--------------DT-------------------------------FYTEKYMGLPS 691 (776)
Q Consensus 658 ~~~~~~~~~v~-~~~~~~~~~~--------------~~-------------------------------~~~~~~~~~~~ 691 (776)
++|++++++|+ .++....... .. .+...+.....
T Consensus 167 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (377)
T 3i1i_A 167 HYPHMVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSI 246 (377)
T ss_dssp HCTTTBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSS
T ss_pred HChHHHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhc
Confidence 99999999999 6655431000 00 00000000000
Q ss_pred CC-----------ccch------------------------h-------cCChhhhhccCCCcEEEEecCCCCccChHHH
Q 004067 692 ED-----------PVGY------------------------E-------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 729 (776)
Q Consensus 692 ~~-----------~~~~------------------------~-------~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~ 729 (776)
.. ...+ . ..+....+.++++|+|+++|++|.++++..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~ 326 (377)
T 3i1i_A 247 EVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYN 326 (377)
T ss_dssp CCGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHH
T ss_pred cccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHH
Confidence 00 0000 0 0111345678899999999999999999999
Q ss_pred HHHHHHHHHCCCCeEEEEecC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 730 ARLINALVAARKPYEILIFPD-ERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 730 ~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
..+++.+.+.+.+++++++++ +||.. ..+.++++.+.+.+||++++
T Consensus 327 ~~~~~~~~~~g~~~~~~~i~~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 327 YKMVDLLQKQGKYAEVYEIESINGHMA-GVFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp HHHHHHHHHTTCCEEECCBCCTTGGGH-HHHCGGGTHHHHHHHHHSCC
T ss_pred HHHHHHHHhcCCCceEEEcCCCCCCcc-hhcCHHHHHHHHHHHHHhhh
Confidence 999999988778899999998 99976 44567889999999998764
No 136
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.79 E-value=2e-18 Score=172.81 Aligned_cols=202 Identities=10% Similarity=-0.006 Sum_probs=138.7
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 634 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 634 (776)
|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+..... ......+..+.+..+++...
T Consensus 5 ~~vv~lHG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~l~~~l~~l~ 70 (258)
T 3dqz_A 5 HHFVLVHNAYHGAW-------IWYKLKPLLESAGHRVTAVELAASGIDPRPIQ-------AVETVDEYSKPLIETLKSLP 70 (258)
T ss_dssp CEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGG-------GCCSHHHHHHHHHHHHHTSC
T ss_pred CcEEEECCCCCccc-------cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCC-------ccccHHHhHHHHHHHHHHhc
Confidence 89999999876644 34456888999999999999999998865321 11345666666666655532
Q ss_pred CCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-------------ccc----c--------------
Q 004067 635 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-------------TFY----T-------------- 683 (776)
Q Consensus 635 id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-------------~~~----~-------------- 683 (776)
. .+++.|+||||||.+++.++.++|++++++|+.+|........ ... .
T Consensus 71 ~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (258)
T 3dqz_A 71 E-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKM 149 (258)
T ss_dssp T-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEEC
T ss_pred c-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhh
Confidence 2 2689999999999999999999999999999888754321100 000 0
Q ss_pred ------ccccCCCCC-Cc--------------cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCC
Q 004067 684 ------EKYMGLPSE-DP--------------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 742 (776)
Q Consensus 684 ------~~~~~~~~~-~~--------------~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 742 (776)
..+...... .. ..+............++|+|+++|++|..+|+.....+.+.+ .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~ 225 (258)
T 3dqz_A 150 GPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNF----NV 225 (258)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHS----CC
T ss_pred hHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhC----Cc
Confidence 000000000 00 000000111112223579999999999999998888887765 45
Q ss_pred eEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 743 YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 743 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
.++++++++||.+ ..+.++++.+.+.+|++++|
T Consensus 226 ~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 226 SKVYEIDGGDHMV-MLSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp SCEEEETTCCSCH-HHHSHHHHHHHHHHHHHHTC
T ss_pred ccEEEcCCCCCch-hhcChHHHHHHHHHHHHHhC
Confidence 5899999999986 55778999999999999886
No 137
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.79 E-value=8.1e-19 Score=171.63 Aligned_cols=198 Identities=14% Similarity=0.096 Sum_probs=140.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhh--
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI-- 610 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~-- 610 (776)
++..+++.++.|.. .+.|+||++||.+++.. .|..++..|++ ||.|+++|.+++...+..+....
T Consensus 14 ~~~~l~~~~~~~~~-----~~~p~vv~lHG~g~~~~-------~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~ 80 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK-----ESRECLFLLHGSGVDET-------TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDP 80 (223)
T ss_dssp CSSSSCEEEESTTS-----SCCCEEEEECCTTBCTT-------TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEET
T ss_pred cCCCceEEEeCCCC-----CCCCEEEEEecCCCCHH-------HHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCC
Confidence 34557777776644 23489999999766543 23345666765 99999999876321111111000
Q ss_pred ---hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccccccccc
Q 004067 611 ---KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM 687 (776)
Q Consensus 611 ---~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 687 (776)
.........+++.+.++.+.++..++.++++|+||||||.+++.++.++|++++++++.+|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------- 150 (223)
T 3b5e_A 81 TRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH---------- 150 (223)
T ss_dssp TEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS----------
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc----------
Confidence 0000011255677777777776567889999999999999999999999999999999988753210
Q ss_pred CCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHH
Q 004067 688 GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEER 767 (776)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 767 (776)
+ .....+++|+|+++|++|..+++..+. +++.+++.+.++++++++ ++|.+. .+..+.
T Consensus 151 --~-------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~~ 208 (223)
T 3b5e_A 151 --V-------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIG-----DPDAAI 208 (223)
T ss_dssp --C-------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCC-----HHHHHH
T ss_pred --c-------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcC-----HHHHHH
Confidence 0 012335689999999999999999999 999999988899999999 999873 233568
Q ss_pred HHHHHHHh
Q 004067 768 IWEFIERT 775 (776)
Q Consensus 768 ~~~fl~~~ 775 (776)
+.+||++.
T Consensus 209 i~~~l~~~ 216 (223)
T 3b5e_A 209 VRQWLAGP 216 (223)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHhh
Confidence 88998764
No 138
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.79 E-value=1.2e-18 Score=175.71 Aligned_cols=201 Identities=12% Similarity=0.106 Sum_probs=140.3
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
..|+||++||.+++.. .|...+..|++ +|.|+++|+||+|.|..... ..+.++++.+.+..+++.
T Consensus 14 ~~~~vvllHG~~~~~~-------~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~ 78 (268)
T 3v48_A 14 DAPVVVLISGLGGSGS-------YWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLA-------EDYSIAQMAAELHQALVA 78 (268)
T ss_dssp TCCEEEEECCTTCCGG-------GGHHHHHHHHT-TSEEEECCCTTBTTBCCCCC-------TTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCccHH-------HHHHHHHHHhh-cCeEEEECCCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHH
Confidence 3588999999876643 34455666755 69999999999998854211 123466666666666665
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-----------------cc--------cccccc
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-----------------TF--------YTEKYM 687 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-----------------~~--------~~~~~~ 687 (776)
. ..+++.++||||||.+++.+|.++|++++++|+.++........ .. +...+.
T Consensus 79 l--~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (268)
T 3v48_A 79 A--GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWM 156 (268)
T ss_dssp T--TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred c--CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhh
Confidence 4 34589999999999999999999999999999988754321000 00 000000
Q ss_pred CCC--------------CCCc-------cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEE
Q 004067 688 GLP--------------SEDP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 746 (776)
Q Consensus 688 ~~~--------------~~~~-------~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 746 (776)
... .... ..+...+....+.++++|+|+++|++|..+|+..+..+.+.+ .+.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~----p~~~~~ 232 (268)
T 3v48_A 157 AARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAAL----PDSQKM 232 (268)
T ss_dssp HTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHC----SSEEEE
T ss_pred hcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhC----CcCeEE
Confidence 000 0000 001111223456788999999999999999999888887765 567999
Q ss_pred EecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 747 IFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 747 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+++++||.+ ..+.++.+.+.+.+||.+.
T Consensus 233 ~~~~~GH~~-~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 233 VMPYGGHAC-NVTDPETFNALLLNGLASL 260 (268)
T ss_dssp EESSCCTTH-HHHCHHHHHHHHHHHHHHH
T ss_pred EeCCCCcch-hhcCHHHHHHHHHHHHHHh
Confidence 999999976 6778999999999999864
No 139
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.79 E-value=8.2e-18 Score=166.39 Aligned_cols=202 Identities=14% Similarity=0.021 Sum_probs=136.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhC-----CcEEEEECCCCCCC------Cchh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-----GILVWKLDNRGTAR------RGLK 605 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~-----G~~v~~~d~rg~g~------~~~~ 605 (776)
+...++.|.. ++.|+||++||.+++.. .+..++..+... ||.|+++|.++... .+..
T Consensus 11 ~~~~~~~~~~-----~~~p~vv~lHG~g~~~~-------~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 78 (239)
T 3u0v_A 11 LQRCIVSPAG-----RHSASLIFLHGSGDSGQ-------GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNV 78 (239)
T ss_dssp CCEEEECCSS-----CCCEEEEEECCTTCCHH-------HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEEC
T ss_pred CCceecCCCC-----CCCcEEEEEecCCCchh-------hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCcccc
Confidence 3444444433 46799999999766543 233345666654 79999999864311 1110
Q ss_pred hhhh----hhhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc
Q 004067 606 FEAS----IKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 678 (776)
Q Consensus 606 ~~~~----~~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 678 (776)
|... .........++++...+..+++. ..++.++++|+||||||++++.++.++|+.++++++.+|..+....
T Consensus 79 w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 158 (239)
T 3u0v_A 79 WFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA 158 (239)
T ss_dssp SSCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH
T ss_pred ceeccCCCcccccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH
Confidence 1000 00000001234444444444332 4468899999999999999999999999999999999887542210
Q ss_pred cccccccccCCCCCCccchhcCChhhhhccCCCc-EEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCC
Q 004067 679 DTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK-LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR 757 (776)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 757 (776)
. +. . ........| +|+++|++|..++++.+..+++.+++.+.+++++++++++|.+.
T Consensus 159 ~-----------------~~---~-~~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~- 216 (239)
T 3u0v_A 159 V-----------------YQ---A-LQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS- 216 (239)
T ss_dssp H-----------------HH---H-HHHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-
T ss_pred H-----------------HH---H-HHhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-
Confidence 0 00 0 002233456 99999999999999999999999999999999999999999874
Q ss_pred CCcHHHHHHHHHHHHHHhC
Q 004067 758 HRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 758 ~~~~~~~~~~~~~fl~~~l 776 (776)
.+..+.+.+||+++|
T Consensus 217 ----~~~~~~~~~~l~~~l 231 (239)
T 3u0v_A 217 ----KTELDILKLWILTKL 231 (239)
T ss_dssp ----HHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHhC
Confidence 456788999998875
No 140
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.78 E-value=2.9e-18 Score=174.22 Aligned_cols=216 Identities=13% Similarity=0.038 Sum_probs=146.0
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.++..+.. +|..+.+..+.+.+ .|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+.
T Consensus 4 ~~~~~~~~-~g~~l~~~~~g~~~-------~~~vv~~hG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 68 (286)
T 3qit_A 4 MEEKFLEF-GGNQICLCSWGSPE-------HPVVLCIHGILEQGL-------AWQEVALPLAAQGYRVVAPDLFGHGRSS 68 (286)
T ss_dssp CEEEEEEE-TTEEEEEEEESCTT-------SCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSC
T ss_pred hhhheeec-CCceEEEeecCCCC-------CCEEEEECCCCcccc-------hHHHHHHHhhhcCeEEEEECCCCCCCCC
Confidence 45555655 78889999987533 378999999877654 3455688899999999999999999886
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-c--
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-T-- 680 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~-~-- 680 (776)
..... ......++.+.+..+++.. +.+++.++||||||.+++.++.++|++++++++.+|........ .
T Consensus 69 ~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 140 (286)
T 3qit_A 69 HLEMV------TSYSSLTFLAQIDRVIQEL--PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESA 140 (286)
T ss_dssp CCSSG------GGCSHHHHHHHHHHHHHHS--CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCH
T ss_pred CCCCC------CCcCHHHHHHHHHHHHHhc--CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhh
Confidence 43211 1223566666666666653 44689999999999999999999999999999998865422110 0
Q ss_pred ------c------------cccc------c-cCCCCCCc-----------------------cc--------h-----hc
Q 004067 681 ------F------------YTEK------Y-MGLPSEDP-----------------------VG--------Y-----EY 699 (776)
Q Consensus 681 ------~------------~~~~------~-~~~~~~~~-----------------------~~--------~-----~~ 699 (776)
. +... . ...+.... .. + ..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (286)
T 3qit_A 141 VNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGR 220 (286)
T ss_dssp HHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHH
T ss_pred hHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccch
Confidence 0 0000 0 00000000 00 0 11
Q ss_pred CChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHH
Q 004067 700 SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 768 (776)
Q Consensus 700 ~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 768 (776)
.+....+.++++|+|+++|++|..++++....+.+.+ .+++++++++ ||.+ ..+.++++.+.+
T Consensus 221 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~g-gH~~-~~e~p~~~~~~i 283 (286)
T 3qit_A 221 SQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTM----TQAKRVFLSG-GHNL-HIDAAAALASLI 283 (286)
T ss_dssp HHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHS----TTSEEEEESS-SSCH-HHHTHHHHHHHH
T ss_pred hHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHC----CCCeEEEeeC-CchH-hhhChHHHHHHh
Confidence 1223345788999999999999999998888877665 4568999999 9976 344555544444
No 141
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.78 E-value=3.1e-18 Score=171.57 Aligned_cols=185 Identities=16% Similarity=0.098 Sum_probs=134.4
Q ss_pred EEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCcc
Q 004067 539 GALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID 618 (776)
Q Consensus 539 ~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~ 618 (776)
+.+|.|.....+.++.|+||++||++++.. .+..++..|+++||.|+++|+|+++ .
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~ 89 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGPS-------TYAGLLSHWASHGFVVAAAETSNAG-----------------T 89 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCGG-------GGHHHHHHHHHHTCEEEEECCSCCT-----------------T
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCch-------hHHHHHHHHHhCCeEEEEecCCCCc-----------------c
Confidence 778888752111137899999999876543 3455688899999999999999531 1
Q ss_pred HHHHHHHHHHHHHc---------CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCC
Q 004067 619 AEDQLTGAEWLIKQ---------GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 689 (776)
Q Consensus 619 ~~D~~~~i~~l~~~---------~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 689 (776)
..|+..+++++.+. ..++.++++++||||||++++.++ .+.+++++++.+|.... .
T Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~-------------~ 154 (258)
T 2fx5_A 90 GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG-------------L 154 (258)
T ss_dssp SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-------------T
T ss_pred HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-------------c
Confidence 23445555555442 245678999999999999999888 45678888887764320 0
Q ss_pred CCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHH-HHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHH
Q 004067 690 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 768 (776)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 768 (776)
+. ....+.++++|+|+++|++|..+++.. ...+++. .+.+++++++++++|.+. .+...++.+.+
T Consensus 155 ~~----------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~-~~~~~~~~~~i 220 (258)
T 2fx5_A 155 GH----------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEP-VGSGGAYRGPS 220 (258)
T ss_dssp TC----------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSS-TTTCGGGHHHH
T ss_pred cc----------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEECCCCCccc-cchHHHHHHHH
Confidence 00 113466788999999999999999886 7777665 356799999999999873 34456788999
Q ss_pred HHHHHHhC
Q 004067 769 WEFIERTL 776 (776)
Q Consensus 769 ~~fl~~~l 776 (776)
.+||+++|
T Consensus 221 ~~fl~~~l 228 (258)
T 2fx5_A 221 TAWFRFQL 228 (258)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998653
No 142
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.78 E-value=1.5e-17 Score=169.45 Aligned_cols=225 Identities=17% Similarity=0.140 Sum_probs=141.1
Q ss_pred CCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCC
Q 004067 521 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 600 (776)
Q Consensus 521 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g 600 (776)
|...+...+...+|.++++..+.+.+ +.|.||++||.+++.. .|..++..|++ +|.|+++|+||+|
T Consensus 2 ~~~~~~~~~~~~~g~~l~~~~~g~~~------~~~~vvllHG~~~~~~-------~~~~~~~~L~~-~~~vi~~Dl~G~G 67 (285)
T 3bwx_A 2 MAEYEDRYWTSSDGLRLHFRAYEGDI------SRPPVLCLPGLTRNAR-------DFEDLATRLAG-DWRVLCPEMRGRG 67 (285)
T ss_dssp CCSSEEEEEECTTSCEEEEEEECBCT------TSCCEEEECCTTCCGG-------GGHHHHHHHBB-TBCEEEECCTTBT
T ss_pred CCccccCeeecCCCceEEEEEcCCCC------CCCcEEEECCCCcchh-------hHHHHHHHhhc-CCEEEeecCCCCC
Confidence 33456777888899999999887543 1367999999876543 34556777776 8999999999999
Q ss_pred CCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCC--CCcc--
Q 004067 601 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV--TSWD-- 676 (776)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~--~~~~-- 676 (776)
.|...... ..+.++++.+.+..+++.. ..+++.|+||||||.+|+.+|.++|++++++|+.++. ....
T Consensus 68 ~S~~~~~~------~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 139 (285)
T 3bwx_A 68 DSDYAKDP------MTYQPMQYLQDLEALLAQE--GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGL 139 (285)
T ss_dssp TSCCCSSG------GGCSHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHH
T ss_pred CCCCCCCc------cccCHHHHHHHHHHHHHhc--CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchh
Confidence 88642100 0112333333333333321 3358999999999999999999999999999986432 1100
Q ss_pred --------------ccc---cc----cccc----------------ccCCCCC------Cc---cchhc-------CChh
Q 004067 677 --------------GYD---TF----YTEK----------------YMGLPSE------DP---VGYEY-------SSVM 703 (776)
Q Consensus 677 --------------~~~---~~----~~~~----------------~~~~~~~------~~---~~~~~-------~~~~ 703 (776)
.+. .. +... +...+.. .. ..+.. .+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (285)
T 3bwx_A 140 ERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMW 219 (285)
T ss_dssp HHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCH
T ss_pred HHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhh
Confidence 000 00 0000 0000000 00 00000 0111
Q ss_pred hhhccC-CCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 704 HHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 704 ~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
..+.++ ++|+|+++|++|..+++.....+. +. .+.++++++++||.. ..+.++.+ ..+.+||.+
T Consensus 220 ~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~----~~-~~~~~~~i~~~gH~~-~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 220 PLFDALATRPLLVLRGETSDILSAQTAAKMA----SR-PGVELVTLPRIGHAP-TLDEPESI-AAIGRLLER 284 (285)
T ss_dssp HHHHHHTTSCEEEEEETTCSSSCHHHHHHHH----TS-TTEEEEEETTCCSCC-CSCSHHHH-HHHHHHHTT
T ss_pred HHHHHccCCCeEEEEeCCCCccCHHHHHHHH----hC-CCcEEEEeCCCCccc-hhhCchHH-HHHHHHHHh
Confidence 123344 799999999999999987665543 44 678999999999986 44555554 689999864
No 143
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.78 E-value=3.8e-18 Score=185.21 Aligned_cols=220 Identities=13% Similarity=0.097 Sum_probs=147.9
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCch
Q 004067 525 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 604 (776)
Q Consensus 525 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~ 604 (776)
..+.+.+.+|..+++.... ..|+||++||++++.. .|..++..|++.||.|+++|+||+|.+..
T Consensus 4 i~~~~~~~dG~~l~y~~~G---------~gp~VV~lHG~~~~~~-------~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~ 67 (456)
T 3vdx_A 4 ITVGQENSTSIDLYYEDHG---------TGVPVVLIHGFPLSGH-------SWERQSAALLDAGYRVITYDRRGFGQSSQ 67 (456)
T ss_dssp EEEEEETTEEEEEEEEEES---------SSEEEEEECCTTCCGG-------GGTTHHHHHHHHTEEEEEECCTTSTTSCC
T ss_pred EeecccccCCeEEEEEEeC---------CCCEEEEECCCCCcHH-------HHHHHHHHHHHCCcEEEEECCCCCCCCCC
Confidence 4455667788888876553 2388999999877644 23456788888999999999999998864
Q ss_pred hhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-CCceEEEEEcCCCCCcccccc---
Q 004067 605 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDGYDT--- 680 (776)
Q Consensus 605 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-~~~~~~~v~~~~~~~~~~~~~--- 680 (776)
... ...++++.+.+..+++.. +.++++++||||||++++.+++.+ |++++++++.+|...+.....
T Consensus 68 ~~~--------~~s~~~~a~dl~~~l~~l--~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~ 137 (456)
T 3vdx_A 68 PTT--------GYDYDTFAADLNTVLETL--DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNP 137 (456)
T ss_dssp CSS--------CCSHHHHHHHHHHHHHHH--TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCC
T ss_pred CCC--------CCCHHHHHHHHHHHHHHh--CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccc
Confidence 321 122444444444333321 446899999999999999988877 899999999988754211000
Q ss_pred -------------------------cccccccCCCCC-----Cccch---------------------hcCChhhhhccC
Q 004067 681 -------------------------FYTEKYMGLPSE-----DPVGY---------------------EYSSVMHHVHKM 709 (776)
Q Consensus 681 -------------------------~~~~~~~~~~~~-----~~~~~---------------------~~~~~~~~~~~i 709 (776)
.+...+...... ....+ ...+....+.++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i 217 (456)
T 3vdx_A 138 DGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRI 217 (456)
T ss_dssp SCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTC
T ss_pred cccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhC
Confidence 000000000000 00000 011233456788
Q ss_pred CCcEEEEecCCCCccChH-HHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 710 KGKLLLVHGMIDENVHFR-HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 710 ~~P~lii~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
++|+|+++|+.|..+++. ....+.+. ..+++++++++++|.+ ..+.+..+.+.+.+||+++
T Consensus 218 ~~PvLiI~G~~D~~vp~~~~~~~l~~~----~~~~~~~~i~gagH~~-~~e~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 218 DVPALILHGTGDRTLPIENTARVFHKA----LPSAEYVEVEGAPHGL-LWTHAEEVNTALLAFLAKA 279 (456)
T ss_dssp CSCCEEEEETTCSSSCGGGTHHHHHHH----CTTSEEEEETTCCSCT-TTTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHH----CCCceEEEeCCCCCcc-hhhCHHHHHHHHHHHHHHh
Confidence 899999999999999988 44444443 3568999999999987 4578899999999999875
No 144
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.78 E-value=3.3e-18 Score=176.34 Aligned_cols=215 Identities=14% Similarity=0.077 Sum_probs=140.1
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhcc
Q 004067 535 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC 614 (776)
Q Consensus 535 ~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~ 614 (776)
..+++....|.+ +.|.||++||.+++.. .|...+..|++.||.|+++|+||+|.|......
T Consensus 34 ~~l~y~~~G~~~------~g~~vvllHG~~~~~~-------~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~------ 94 (310)
T 1b6g_A 34 LRAHYLDEGNSD------AEDVFLCLHGEPTWSY-------LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDE------ 94 (310)
T ss_dssp CEEEEEEEECTT------CSCEEEECCCTTCCGG-------GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG------
T ss_pred eEEEEEEeCCCC------CCCEEEEECCCCCchh-------hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCc------
Confidence 889988876532 1368999999876543 344567889999999999999999998643110
Q ss_pred CCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCC--cc----------ccc---
Q 004067 615 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS--WD----------GYD--- 679 (776)
Q Consensus 615 ~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~--~~----------~~~--- 679 (776)
..+.++++.+.+..+++.- +.+++.|+||||||.+|+.+|.++|++++++|+.++... .. ...
T Consensus 95 ~~y~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (310)
T 1b6g_A 95 EDYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGF 172 (310)
T ss_dssp GGCCHHHHHHHHHHHHHHH--TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTH
T ss_pred CCcCHHHHHHHHHHHHHHc--CCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHH
Confidence 1123455555444444432 345899999999999999999999999999998876431 00 000
Q ss_pred cccc------ccc-----c--CCCCCCc---cchh--------------------cC---------Chhhhhc-cCCCcE
Q 004067 680 TFYT------EKY-----M--GLPSEDP---VGYE--------------------YS---------SVMHHVH-KMKGKL 713 (776)
Q Consensus 680 ~~~~------~~~-----~--~~~~~~~---~~~~--------------------~~---------~~~~~~~-~i~~P~ 713 (776)
..+. ... . ....... ..|. .. .....+. ++++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 252 (310)
T 1b6g_A 173 TAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQT 252 (310)
T ss_dssp HHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEE
T ss_pred HHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCce
Confidence 0000 000 0 0000000 0000 00 0112345 899999
Q ss_pred EEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 714 LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 714 lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
|+++|++|..++ ..+..+.+.+. +.....++++++||.. .. .++++.+.+.+||.+.
T Consensus 253 Lvi~G~~D~~~~-~~~~~~~~~ip--~~~~~~i~~~~~GH~~-~~-~p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 253 FMAIGMKDKLLG-PDVMYPMKALI--NGCPEPLEIADAGHFV-QE-FGEQVAREALKHFAET 309 (310)
T ss_dssp EEEEETTCSSSS-HHHHHHHHHHS--TTCCCCEEETTCCSCG-GG-GHHHHHHHHHHHHHHT
T ss_pred EEEeccCcchhh-hHHHHHHHhcc--cccceeeecCCcccch-hh-ChHHHHHHHHHHHhcc
Confidence 999999999999 77777777662 2223333349999987 55 8999999999999763
No 145
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.78 E-value=2.3e-18 Score=171.79 Aligned_cols=184 Identities=14% Similarity=0.032 Sum_probs=133.9
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEE--CCCCCCCCchhhh-hhh--hhccCCccHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKL--DNRGTARRGLKFE-ASI--KHNCGRIDAEDQLTGA 626 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~--d~rg~g~~~~~~~-~~~--~~~~~~~~~~D~~~~i 626 (776)
++.|+||++||++++.. .|..+++.|++ +|.|+++ |++|+|++..... ... .........+|+.+++
T Consensus 60 ~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l 131 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN-------QFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFI 131 (251)
T ss_dssp TTSCEEEEECCTTCCHH-------HHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh-------HHHHHHHhcCC-CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHH
Confidence 36699999999876543 23445667766 4999999 7888876531100 000 0000011256777777
Q ss_pred HHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhh
Q 004067 627 EWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHV 706 (776)
Q Consensus 627 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (776)
+++.++. +.++++|+||||||++++.++.++|++++++|+.+|...... ....
T Consensus 132 ~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-------------------------~~~~ 184 (251)
T 2r8b_A 132 KANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------KISP 184 (251)
T ss_dssp HHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-------------------------CCCC
T ss_pred HHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-------------------------cccc
Confidence 7776654 668999999999999999999999999999999998754321 0112
Q ss_pred ccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 707 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 707 ~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
..+++|+|+++|++|..+++..+.++++.+.+.+..+++ ++++++|.+ ..+..+.+.+||.++|
T Consensus 185 ~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~-----~~~~~~~~~~~l~~~l 248 (251)
T 2r8b_A 185 AKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEI-----RSGEIDAVRGFLAAYG 248 (251)
T ss_dssp CCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSC-----CHHHHHHHHHHHGGGC
T ss_pred cccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCcc-----CHHHHHHHHHHHHHhc
Confidence 345789999999999999999999999999877777766 666789987 2334688899998875
No 146
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.78 E-value=1.3e-18 Score=190.69 Aligned_cols=243 Identities=15% Similarity=0.163 Sum_probs=166.4
Q ss_pred hhccCCCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCccccc-----cccc-------cc---c-hh
Q 004067 516 IKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC-----DSWI-------NT---V-DM 579 (776)
Q Consensus 516 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~-----~~~~-------~~---~-~~ 579 (776)
+.+.++...+.+.|+..||.+|.+.+|.|++. +++|+||+.||........ ..|. .. | ..
T Consensus 33 ~~~~~~~~~~~v~i~~~DG~~L~a~l~~P~~~----~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 108 (560)
T 3iii_A 33 YGNQEMIMEKDGTVEMRDGEKLYINIFRPNKD----GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESP 108 (560)
T ss_dssp TEEEEEEEEEEEEEECTTSCEEEEEEEECSSS----SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSC
T ss_pred cCCCceEEEEEEEEECCCCcEEEEEEEecCCC----CCCCEEEEecCCCCCcccccccccccccccccccccccccccCC
Confidence 33444556788999999999999999999863 6899999999865542100 0010 00 0 11
Q ss_pred hhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC
Q 004067 580 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 659 (776)
Q Consensus 580 ~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~ 659 (776)
.++.|+++||+|+.+|+||+|+|+..+. .++..+.+|+.++++|+.++++.+ .+|+++|+||||++++.+|+.+
T Consensus 109 ~~~~la~~Gy~vv~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~ 182 (560)
T 3iii_A 109 DPGFWVPNDYVVVKVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLN 182 (560)
T ss_dssp CHHHHGGGTCEEEEEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTC
T ss_pred CHHHHHhCCCEEEEEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcC
Confidence 3678999999999999999999986653 223356899999999999987766 8999999999999999999999
Q ss_pred CCceEEEEEcCCCCCccc---ccc---------cccc----c-------------ccCCCCCCccchhcCChhhhhccCC
Q 004067 660 PDVFQCAVSGAPVTSWDG---YDT---------FYTE----K-------------YMGLPSEDPVGYEYSSVMHHVHKMK 710 (776)
Q Consensus 660 ~~~~~~~v~~~~~~~~~~---~~~---------~~~~----~-------------~~~~~~~~~~~~~~~~~~~~~~~i~ 710 (776)
|+.++|+|+.+|+.++.. +.. .+.. . +...+. ....|...++ .+.+|+
T Consensus 183 p~~l~aiv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~-~d~~W~~~~~--~~~~I~ 259 (560)
T 3iii_A 183 PPHLKAMIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPL-FDDFWKQRQV--PLSQIK 259 (560)
T ss_dssp CTTEEEEEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCS-SCHHHHTTBC--CGGGCC
T ss_pred CCceEEEEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCC-cchHhhccCC--chhhCC
Confidence 999999999999988531 100 0000 0 000111 1123333333 578999
Q ss_pred CcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 711 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 711 ~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+|+|+++|..|..+....+.+.++++... ...+++.+ .+|.. . ....+..+.+.+||+++|
T Consensus 260 vPvl~v~Gw~D~~~~~~g~l~~y~~l~~~--~k~l~ih~-~~~~~-~-~~~~~~~~~~~~wfD~~L 320 (560)
T 3iii_A 260 TPLLTCASWSTQGLHNRGSFEGFKQAASE--EKWLYVHG-RKEWE-S-YYARENLERQKSFFDFYL 320 (560)
T ss_dssp SCEEEEEEGGGTTTTHHHHHHHHHHCCCS--SEEEEEES-SCHHH-H-HHSHHHHHHHHHHHHHHT
T ss_pred CCEEEeCCcCCCcccchhHHHHHHhcccc--CcEEEECC-CCCcC-c-ccChhHHHHHHHHHHHHh
Confidence 99999999999756666667777776432 23444432 22321 0 012245678899999987
No 147
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=1.8e-17 Score=174.19 Aligned_cols=238 Identities=12% Similarity=0.093 Sum_probs=162.8
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|||.+...+.+..+||++++++++.++++.. .. +..+.|||
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~------------------------~~-~~~~~wsp-- 113 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA------------------------KN-IRSLEWNE-- 113 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE------------------------SE-EEEEEECT--
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC------------------------CC-ccceeECC--
Confidence 3789999999999999875433346899999999999888852 12 77899999
Q ss_pred CCceEEEEeC----------------------------CCcEEEEeCCCCcc-ceecCCCCCCCccCceeCCCCCEEEEE
Q 004067 137 SKKKIIMVPL----------------------------PDGIYFQDLSCSKP-ELKLSSSSCSPVIDPHLSSDGTMIAFV 187 (776)
Q Consensus 137 ~dg~~l~~~~----------------------------~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~~SpDg~~la~~ 187 (776)
||++|+|.. ..+||++|+.+++. + .++. + .+..+.||||| ++|+
T Consensus 114 -dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~-~l~~-~--~~~~~~~spdg--~~~~ 186 (347)
T 2gop_A 114 -DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE-EFEK-P--RFSSGIWHRDK--IVVN 186 (347)
T ss_dssp -TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE-EEEE-E--TTCEEEEETTE--EEEE
T ss_pred -CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe-eecC-C--CcccccCCCCe--EEEE
Confidence 999999984 24699999999988 6 6665 3 47889999999 7777
Q ss_pred EC-----------CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEE
Q 004067 188 RD-----------CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFR 256 (776)
Q Consensus 188 ~~-----------~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 256 (776)
.. .+||+++ +|+.++++.. .. ...+||||++|+|.+.+....
T Consensus 187 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~--------------------~~~~spdg~~l~~~~~~~~~~---- 239 (347)
T 2gop_A 187 VPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VS--------------------FYAVDSDGERILLYGKPEKKY---- 239 (347)
T ss_dssp EECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ES--------------------EEEEEECSSCEEEEECCSSSC----
T ss_pred EecccccccccccccEEEeC--CCceEEeccC-cc--------------------eeeECCCCCEEEEEEccccCC----
Confidence 62 2588888 7887777653 11 123499999999987532110
Q ss_pred EeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEE-EEeccCCeEEEEEEeec
Q 004067 257 IMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLAR-VNWMHGNILTAQVLNRS 335 (776)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~SpDg~~l~~~~~~~ 335 (776)
......|+++| +++.+.+. ......+.. +.|+ || +++.....
T Consensus 240 ------------------------~~~~~~l~~~d--~~~~~~l~--------~~~~~~~~~~~~~s-dg--~~~~~~~~ 282 (347)
T 2gop_A 240 ------------------------MSEHNKLYIYD--GKEVMGIL--------DEVDRGVGQAKIKD-GK--VYFTLFEE 282 (347)
T ss_dssp ------------------------CCSSCEEEEEC--SSCEEESS--------TTCCSEEEEEEEET-TE--EEEEEEET
T ss_pred ------------------------ccccceEEEEC--CCceEecc--------ccCCcccCCccEEc-Cc--EEEEEecC
Confidence 00125689998 66665552 233456665 8999 88 44444443
Q ss_pred CceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCce-EEEEEeCCCceeeccccCC
Q 004067 336 QTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR-HLYLHDINGTCLGPITEGD 412 (776)
Q Consensus 336 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~-~l~~~~~~g~~~~~lt~~~ 412 (776)
....|| ++ +|+.+.++..... +.. +++++ .++++....+.. .||.++ ++.++||..+
T Consensus 283 -~~~~l~-~~--~g~~~~~~~~~~~--v~~----------~~~s~-~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n 340 (347)
T 2gop_A 283 -GSVNLY-IW--DGEIKPIAKGRHW--IMG----------FDVDE-IVVYLKETATRLRELFTWD---GEEKQLTDYN 340 (347)
T ss_dssp -TEEEEE-EE--SSSEEEEECSSSE--EEE----------EEESS-SEEEEEECSSSCCEEEEES---SSEEECCCTT
T ss_pred -CcEEEE-Ec--CCceEEEecCCCe--EEe----------eeeeC-cEEEEEcCCCChHHheEeC---CcEEEecccc
Confidence 356788 87 4666666543211 110 12334 577776655544 899998 5577787654
No 148
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.78 E-value=7.3e-18 Score=178.56 Aligned_cols=232 Identities=14% Similarity=0.091 Sum_probs=154.2
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccc----------cccccchhhh---HHHHhCCcEEEEECCCC-
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCD----------SWINTVDMRA---QYLRSKGILVWKLDNRG- 598 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~----------~~~~~~~~~~---~~l~~~G~~v~~~d~rg- 598 (776)
+|..+++..+.+.+. ++.|+||++||.+++..... .| ..++ ..|.+.||.|+++|+||
T Consensus 29 ~g~~l~y~~~g~~~~----~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~l~~~g~~vi~~D~~G~ 100 (366)
T 2pl5_A 29 SPVVIAYETYGTLSS----SKNNAILICHALSGDAHAAGYHSGSDKKPGWW----DDYIGPGKSFDTNQYFIICSNVIGG 100 (366)
T ss_dssp SSEEEEEEEEECCCT----TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTT----TTTEETTSSEETTTCEEEEECCTTC
T ss_pred cCceeeEEeccCcCC----CCCceEEEecccCCcccccccccccccccchH----HhhcCCcccccccccEEEEecCCCc
Confidence 455788888776542 23589999999876643100 23 2223 23557899999999999
Q ss_pred -CCCCchhhhhhh-----hhccCCccHHHHHHHHHHHHHcCCCCCCcE-EEEeechHHHHHHHHHhhCCCceEEEEEcCC
Q 004067 599 -TARRGLKFEASI-----KHNCGRIDAEDQLTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAP 671 (776)
Q Consensus 599 -~g~~~~~~~~~~-----~~~~~~~~~~D~~~~i~~l~~~~~id~~~i-~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~ 671 (776)
+|.++....... ........++++.+.+..+++.. +.+++ .|+||||||.+++.+|.++|++++++|+.+|
T Consensus 101 ~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 178 (366)
T 2pl5_A 101 CKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL--GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMAS 178 (366)
T ss_dssp SSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT--TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESC
T ss_pred ccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc--CCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEecc
Confidence 777653211000 01111245777777777776653 44688 7999999999999999999999999999988
Q ss_pred CCCcccccc---------------------------------------------cccccccCCC--------CCCccch-
Q 004067 672 VTSWDGYDT---------------------------------------------FYTEKYMGLP--------SEDPVGY- 697 (776)
Q Consensus 672 ~~~~~~~~~---------------------------------------------~~~~~~~~~~--------~~~~~~~- 697 (776)
......... .+...+.... ......+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (366)
T 2pl5_A 179 TAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYL 258 (366)
T ss_dssp CSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGG
T ss_pred CccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHH
Confidence 654211000 0000000000 0000000
Q ss_pred -----------------------hcCC------hhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEe
Q 004067 698 -----------------------EYSS------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 748 (776)
Q Consensus 698 -----------------------~~~~------~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 748 (776)
...+ ....+.++++|+|+++|++|.++++..+..+.+.+...+.+++++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (366)
T 2pl5_A 259 IYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVEL 338 (366)
T ss_dssp GSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEe
Confidence 0000 12256788999999999999999999999999999876667899999
Q ss_pred -cCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 749 -PDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 749 -~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+++||.+ ..+..+++.+.+.+||+++
T Consensus 339 ~~~~gH~~-~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 339 QSGEGHDS-FLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp CCCBSSGG-GGSCCHHHHHHHHHHHHCC
T ss_pred CCCCCcch-hhcChhHHHHHHHHHHccC
Confidence 8999987 4456789999999999864
No 149
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.78 E-value=2.1e-16 Score=164.79 Aligned_cols=279 Identities=11% Similarity=-0.009 Sum_probs=189.0
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEE-eecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQEL-VFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
.+..++|||||+.|+..+ + ..|.+|++.+++... +..... ..+...+....|+|
T Consensus 53 ~v~~~~~~~~~~~l~~~~--d----g~i~iw~~~~~~~~~~~~~~~~-------------------~~~~~~v~~~~~~~ 107 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG--K----GCVKVWDISHPGNKSPVSQLDC-------------------LNRDNYIRSCKLLP 107 (337)
T ss_dssp CCCEEEECSSSSEEEEEC--B----SEEEEEETTSTTCCSCSEEEEC-------------------SCTTSBEEEEEECT
T ss_pred ceEEEEEecCCcEEEEcC--C----CeEEEEECCCCCceeeeecccc-------------------cCCCCcEEEEEEcC
Confidence 358999999999999765 2 469999998765311 110000 00124688999999
Q ss_pred cCCCceEEEEe-CCCcEEEEeCCCCccc--eecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCC
Q 004067 135 TSSKKKIIMVP-LPDGIYFQDLSCSKPE--LKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGAN 210 (776)
Q Consensus 135 ~~~dg~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~ 210 (776)
||+.|+.. .++.|++||+.+++.. ..+.... ..+..+.|+|||+.|+.... +.|++|++.+++.........
T Consensus 108 ---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~ 183 (337)
T 1gxr_A 108 ---DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 183 (337)
T ss_dssp ---TSSEEEEEESSSEEEEEECCCC--EEEEEEECSS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred ---CCCEEEEEcCCCcEEEEECCCCCcceeeecccCC-CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeeccc
Confidence 99998876 6788999999988743 1333332 24778999999999988875 579999999887654433211
Q ss_pred CCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEE
Q 004067 211 GNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVV 290 (776)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~ 290 (776)
. .+..+.|+|||+.|+....+ ..|++|
T Consensus 184 ~-----------------~i~~~~~~~~~~~l~~~~~d------------------------------------g~i~~~ 210 (337)
T 1gxr_A 184 D-----------------GASCIDISNDGTKLWTGGLD------------------------------------NTVRSW 210 (337)
T ss_dssp S-----------------CEEEEEECTTSSEEEEEETT------------------------------------SEEEEE
T ss_pred C-----------------ceEEEEECCCCCEEEEEecC------------------------------------CcEEEE
Confidence 1 14578899999988876632 358999
Q ss_pred EcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccc
Q 004067 291 SAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFT 370 (776)
Q Consensus 291 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 370 (776)
|+.+++.... ......+..+.|+|||+.++... .+..|++||+.+++...+..+...... -.|+
T Consensus 211 d~~~~~~~~~---------~~~~~~v~~~~~s~~~~~l~~~~----~~~~i~~~~~~~~~~~~~~~~~~~v~~---~~~~ 274 (337)
T 1gxr_A 211 DLREGRQLQQ---------HDFTSQIFSLGYCPTGEWLAVGM----ESSNVEVLHVNKPDKYQLHLHESCVLS---LKFA 274 (337)
T ss_dssp ETTTTEEEEE---------EECSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTSSCEEEECCCSSCEEE---EEEC
T ss_pred ECCCCceEee---------ecCCCceEEEEECCCCCEEEEEc----CCCcEEEEECCCCCeEEEcCCccceeE---EEEC
Confidence 9998876554 22345688899999999887765 334599999998887655444332111 1122
Q ss_pred cCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 371 PLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 371 ~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
| ++.++++...+| .|++|++..++......+...+..+. |+++++.|+..+. ++ .+.+|.+-
T Consensus 275 ~--------~~~~l~~~~~dg--~i~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~-dg--~i~iw~~~ 336 (337)
T 1gxr_A 275 Y--------CGKWFVSTGKDN--LLNAWRTPYGASIFQSKESSSVLSCD-ISVDDKYIVTGSG-DK--KATVYEVI 336 (337)
T ss_dssp T--------TSSEEEEEETTS--EEEEEETTTCCEEEEEECSSCEEEEE-ECTTSCEEEEEET-TS--CEEEEEEE
T ss_pred C--------CCCEEEEecCCC--cEEEEECCCCeEEEEecCCCcEEEEE-ECCCCCEEEEecC-CC--eEEEEEEe
Confidence 2 234566666677 89999988776654444455566654 9999997666554 33 37888763
No 150
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.78 E-value=9e-19 Score=187.95 Aligned_cols=234 Identities=14% Similarity=0.119 Sum_probs=152.3
Q ss_pred EEEEcCCCcEEEEEEEcCCCC--CCCCCCceEEEEEcCCCCcccccccccccchhhhHHHH----hCCc---EEEEECCC
Q 004067 527 VQIQANDGTVLYGALYKPDES--RYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR----SKGI---LVWKLDNR 597 (776)
Q Consensus 527 ~~~~~~dg~~l~~~~~~P~~~--~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~----~~G~---~v~~~d~r 597 (776)
..+...||..+++..+.|.+. ....++.|+||++||.+++.. .|..++..|+ ..|| .|+++|+|
T Consensus 23 ~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~-------~~~~~~~~L~~~~~~~G~~~~~vi~~D~~ 95 (398)
T 2y6u_A 23 STLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV-------VWEYYLPRLVAADAEGNYAIDKVLLIDQV 95 (398)
T ss_dssp SBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG-------GGGGGGGGSCCCBTTTTEEEEEEEEECCT
T ss_pred ccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH-------HHHHHHHHHHHhhhhcCcceeEEEEEcCC
Confidence 345567999999999998651 011134689999999876654 2334466676 4589 99999999
Q ss_pred CCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc-C---CCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 598 GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-G---LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 598 g~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~---~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
|+|.|....... ......+.+....+..++.. . .++..+++|+||||||.+++.++.++|++++++|+.+|..
T Consensus 96 G~G~S~~~~~~~---~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 172 (398)
T 2y6u_A 96 NHGDSAVRNRGR---LGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVV 172 (398)
T ss_dssp TSHHHHHHTTTT---BCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCC
T ss_pred CCCCCCCCCccc---cCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccc
Confidence 998775421100 00122334443333333322 1 1344459999999999999999999999999999998865
Q ss_pred Cccc--------cc-------ccc--------ccc---------cc---C-CCCCCc---cch-----------------
Q 004067 674 SWDG--------YD-------TFY--------TEK---------YM---G-LPSEDP---VGY----------------- 697 (776)
Q Consensus 674 ~~~~--------~~-------~~~--------~~~---------~~---~-~~~~~~---~~~----------------- 697 (776)
.... .. ..+ ... ++ . ...... ..+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (398)
T 2y6u_A 173 ITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGP 252 (398)
T ss_dssp SCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CC
T ss_pred ccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCc
Confidence 4310 00 000 000 00 0 000000 000
Q ss_pred --------------h-----cCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCC
Q 004067 698 --------------E-----YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH 758 (776)
Q Consensus 698 --------------~-----~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 758 (776)
. .......+.++++|+|+++|++|.++++..+..+.+.+ .++++++++++||.+ ..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~----~~~~~~~~~~~gH~~-~~ 327 (398)
T 2y6u_A 253 VRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL----QNYHLDVIPGGSHLV-NV 327 (398)
T ss_dssp EEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC----SSEEEEEETTCCTTH-HH
T ss_pred eEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC----CCceEEEeCCCCccc-hh
Confidence 0 00122456788999999999999999998888777765 468999999999976 44
Q ss_pred CcHHHHHHHHHHHHHHh
Q 004067 759 RDRIYMEERIWEFIERT 775 (776)
Q Consensus 759 ~~~~~~~~~~~~fl~~~ 775 (776)
+..+++.+.+.+||.++
T Consensus 328 e~p~~~~~~i~~fl~~~ 344 (398)
T 2y6u_A 328 EAPDLVIERINHHIHEF 344 (398)
T ss_dssp HSHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 57888999999999875
No 151
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.78 E-value=2.5e-18 Score=177.14 Aligned_cols=217 Identities=11% Similarity=0.063 Sum_probs=147.7
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhh
Q 004067 527 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 606 (776)
Q Consensus 527 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~ 606 (776)
..+.. +|..+++..+.+ .|+||++||.+++.. .|..++..|...||.|+++|+||+|.+....
T Consensus 12 ~~~~~-~g~~l~~~~~g~---------~~~vv~~HG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~ 74 (309)
T 3u1t_A 12 RTVEV-EGATIAYVDEGS---------GQPVLFLHGNPTSSY-------LWRNIIPYVVAAGYRAVAPDLIGMGDSAKPD 74 (309)
T ss_dssp EEEEE-TTEEEEEEEEEC---------SSEEEEECCTTCCGG-------GGTTTHHHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred eEEEE-CCeEEEEEEcCC---------CCEEEEECCCcchhh-------hHHHHHHHHHhCCCEEEEEccCCCCCCCCCC
Confidence 33443 788888877642 268999999876644 2344577777889999999999999886422
Q ss_pred hhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc-------ccc
Q 004067 607 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD-------GYD 679 (776)
Q Consensus 607 ~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~-------~~~ 679 (776)
. ....+++.+.+..+++.. ..+++.|+||||||.+++.++.++|++++++|+.+|..... .+.
T Consensus 75 ~--------~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 144 (309)
T 3u1t_A 75 I--------EYRLQDHVAYMDGFIDAL--GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMG 144 (309)
T ss_dssp S--------CCCHHHHHHHHHHHHHHH--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGH
T ss_pred c--------ccCHHHHHHHHHHHHHHc--CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccc
Confidence 1 234566666666555543 34689999999999999999999999999999887653311 000
Q ss_pred c----c-------------------cccccc--C-C-CCCCc---cchhc------------------------------
Q 004067 680 T----F-------------------YTEKYM--G-L-PSEDP---VGYEY------------------------------ 699 (776)
Q Consensus 680 ~----~-------------------~~~~~~--~-~-~~~~~---~~~~~------------------------------ 699 (776)
. . +...++ . . ..... ..+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (309)
T 3u1t_A 145 PQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAE 224 (309)
T ss_dssp HHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHH
T ss_pred hhhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhh
Confidence 0 0 000000 0 0 00000 00000
Q ss_pred -CChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 700 -SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 700 -~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
.+....+.++++|+|+++|++|..+++.....+.+.+ .+.++++++++||.+ ..+.++++.+.+.+||+++
T Consensus 225 ~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 296 (309)
T 3u1t_A 225 VLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENV----PNLEVRFVGAGTHFL-QEDHPHLIGQGIADWLRRN 296 (309)
T ss_dssp HHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS----TTEEEEEEEEESSCH-HHHCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhC----CCCEEEEecCCcccc-hhhCHHHHHHHHHHHHHhc
Confidence 0112235678899999999999999998887887765 456788889999976 5567889999999999875
No 152
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.77 E-value=1.3e-18 Score=184.96 Aligned_cols=218 Identities=14% Similarity=0.089 Sum_probs=139.8
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCccccc-------ccccccch----hhhHHHHhCCcEE
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC-------DSWINTVD----MRAQYLRSKGILV 591 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~-------~~~~~~~~----~~~~~l~~~G~~v 591 (776)
..+.+.+++.+|..++++++.|++. .++.|+||++||.++..... ..+...+. .+++.|+++||+|
T Consensus 86 ~~e~v~~~~~~g~~l~~~l~~P~~~---~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~V 162 (391)
T 3g8y_A 86 ILEKWEFYPFPKSVSTFLVLKPEHL---KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVA 162 (391)
T ss_dssp EEEEEEECCSTTCCEEEEEEEETTC---CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEE
T ss_pred EEEEEEEEcCCCCEEEEEEEeCCCC---CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEE
Confidence 4577888888999999999999763 25789999999976543210 00111112 4588999999999
Q ss_pred EEECCCCCCCCchhhhh---------hhh---hccCC----ccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHH
Q 004067 592 WKLDNRGTARRGLKFEA---------SIK---HNCGR----IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 655 (776)
Q Consensus 592 ~~~d~rg~g~~~~~~~~---------~~~---~~~~~----~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~ 655 (776)
+++|+||+|.++..... ... ...+. ....|+.++++++.+++.+|.+||+|+||||||++++.+
T Consensus 163 l~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~ 242 (391)
T 3g8y_A 163 VAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVL 242 (391)
T ss_dssp EECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHH
Confidence 99999999987643110 000 00111 124789999999999988999999999999999999999
Q ss_pred HhhCCCceEEEEEcCCCCCcccccccccc--cccCC--CC----CCccchhcCChhhhhccC-CCcEEEEecCCCCccCh
Q 004067 656 LARFPDVFQCAVSGAPVTSWDGYDTFYTE--KYMGL--PS----EDPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHF 726 (776)
Q Consensus 656 a~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~--~~----~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D~~v~~ 726 (776)
++.. ++++++|+.+++..+......... ..... +. .....+...+....+..+ ..|+|++||+.|.++
T Consensus 243 a~~~-~~i~a~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~d~~~~~~~~ap~P~LiihG~~D~~v-- 319 (391)
T 3g8y_A 243 GVLD-KDIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVASLAPRPIIFTEGGLDRDF-- 319 (391)
T ss_dssp HHHC-TTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTGGGTCCHHHHHHTTTTSCEEECSCBCHHHH--
T ss_pred HHcC-CceeEEEEccCCCCcccchhhcccccccccccccccHHHhCccHHhhCCHHHHHHhhcCCCEEEEcCCccHHH--
Confidence 8864 567888888887766422111100 00000 00 001112223333444444 369999999999887
Q ss_pred HHHHHHHHHHHHCCC--CeEEEEec
Q 004067 727 RHTARLINALVAARK--PYEILIFP 749 (776)
Q Consensus 727 ~~~~~~~~~l~~~~~--~~~~~~~~ 749 (776)
....++++ ..+. ++++..++
T Consensus 320 ~~~~~~~~---~~g~~~~~~~~~~~ 341 (391)
T 3g8y_A 320 RLVQSAYA---ASGKPENAEFHHYP 341 (391)
T ss_dssp HHHHHHHH---HTTCGGGEEECCCG
T ss_pred HHHHHHHH---HcCCCceeEEEEeC
Confidence 33344444 4443 45555544
No 153
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.77 E-value=4.5e-16 Score=160.70 Aligned_cols=281 Identities=12% Similarity=0.127 Sum_probs=192.6
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+..+.+ ..|.+|++.+++....... +..++....|+|
T Consensus 26 v~~~~~s~~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~-----------------------h~~~v~~~~~~~-- 75 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSSAD-----KLIKIWGAYDGKFEKTISG-----------------------HKLGISDVAWSS-- 75 (312)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECC-----------------------CSSCEEEEEECT--
T ss_pred EEEEEECCCCCEEEEeeCC-----CeEEEEeCCCcccchhhcc-----------------------CCCceEEEEEcC--
Confidence 5789999999999876543 3699999988876554431 124688999999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCce
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTV 214 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~ 214 (776)
||+.|+.. .++.|.+||+.+++....+.... ..+....|+|+++.|+.... +.|.+||+.+++..........
T Consensus 76 -~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--- 150 (312)
T 4ery_A 76 -DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--- 150 (312)
T ss_dssp -TSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS---
T ss_pred -CCCEEEEECCCCEEEEEECCCCcEEEEEcCCC-CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC---
Confidence 99999876 77899999999888663454433 34778899999999988775 5799999998875443222111
Q ss_pred ecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC
Q 004067 215 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG 294 (776)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 294 (776)
.+..+.|+|||+.|+....+ ..|.+||+.+
T Consensus 151 --------------~v~~~~~~~~~~~l~~~~~d------------------------------------~~i~~wd~~~ 180 (312)
T 4ery_A 151 --------------PVSAVHFNRDGSLIVSSSYD------------------------------------GLCRIWDTAS 180 (312)
T ss_dssp --------------CEEEEEECTTSSEEEEEETT------------------------------------SCEEEEETTT
T ss_pred --------------cEEEEEEcCCCCEEEEEeCC------------------------------------CcEEEEECCC
Confidence 14578899999988876643 2478999988
Q ss_pred CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec-cCceeecccccccCC
Q 004067 295 GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLD 373 (776)
Q Consensus 295 ~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~~~~ 373 (776)
++...... ......+..++|+|||+.++... .+..|.+||+.+++........ ...+.. ...+
T Consensus 181 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~---- 244 (312)
T 4ery_A 181 GQCLKTLI-------DDDNPPVSFVKFSPNGKYILAAT----LDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANF---- 244 (312)
T ss_dssp CCEEEEEC-------CSSCCCEEEEEECTTSSEEEEEE----TTTEEEEEETTTTEEEEEECSSCCSSSCC-CEEE----
T ss_pred CceeeEEe-------ccCCCceEEEEECCCCCEEEEEc----CCCeEEEEECCCCcEEEEEEecCCceEEE-EEEE----
Confidence 77544322 23445677899999999877765 3457999999988764443321 111100 0001
Q ss_pred CCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEEEEEeecCCCcEEEEEEc-cCCCceeeEEEEE
Q 004067 374 KGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGT-LDGPLESHLYCAK 446 (776)
Q Consensus 374 ~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~dg~~i~~~~~-~~~~~~~~l~~~~ 446 (776)
...++.++++...+| .|++|++.+++. ..+..+...+.... |+|++..++..+. .++ .+.+|+.+
T Consensus 245 ---~~~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~-~~p~~~~l~s~~~~~d~--~i~~W~~d 311 (312)
T 4ery_A 245 ---SVTGGKWIVSGSEDN--LVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDK--TIKLWKSD 311 (312)
T ss_dssp ---ECSSSCEEEECCTTS--CEEEEETTTCCEEEEECCCSSCEEEEE-ECSSSSEEEEEECTTTC--CEEEEECC
T ss_pred ---EeCCCcEEEEECCCC--EEEEEECCCchhhhhhhccCCcEEEEe-ecCcCCceEEEEccCCc--cEEEecCC
Confidence 112445666666777 899999887754 45555555566554 9999997665553 333 47888753
No 154
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.77 E-value=3e-16 Score=167.79 Aligned_cols=272 Identities=11% Similarity=0.026 Sum_probs=184.5
Q ss_pred CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE--CCcEEEEecCCCceeEEeeCCCCCceecCCcccce
Q 004067 146 LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR--DCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIA 223 (776)
Q Consensus 146 ~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~ 223 (776)
.++.|++||+.+++....+... . .+..++|||||+.|++.. ++.|++|++.+++..+....+..
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~------------ 75 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVG-S-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS------------ 75 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECS-S-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS------------
T ss_pred CCCEEEEEECCCCeEEEEeecC-C-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCC------------
Confidence 5688999999998877344332 2 367899999999987775 46799999999987665443321
Q ss_pred ecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcc
Q 004067 224 QEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQ 303 (776)
Q Consensus 224 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~ 303 (776)
+..++|+|||+.|++...+. ..|++||+++++.....
T Consensus 76 ------v~~~~~spdg~~l~~~~~~~-----------------------------------~~v~v~d~~~~~~~~~~-- 112 (391)
T 1l0q_A 76 ------PQGVAVSPDGKQVYVTNMAS-----------------------------------STLSVIDTTSNTVAGTV-- 112 (391)
T ss_dssp ------EEEEEECTTSSEEEEEETTT-----------------------------------TEEEEEETTTTEEEEEE--
T ss_pred ------ccceEECCCCCEEEEEECCC-----------------------------------CEEEEEECCCCeEEEEE--
Confidence 45788999999988765321 35899999998875542
Q ss_pred cCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeE
Q 004067 304 CGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGF 383 (776)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (776)
.....+..++|+|||+.+++... .+..|++||+.+++............ .-.|+| ++..+
T Consensus 113 -------~~~~~~~~~~~s~dg~~l~~~~~---~~~~v~~~d~~~~~~~~~~~~~~~~~---~~~~~~-------dg~~l 172 (391)
T 1l0q_A 113 -------KTGKSPLGLALSPDGKKLYVTNN---GDKTVSVINTVTKAVINTVSVGRSPK---GIAVTP-------DGTKV 172 (391)
T ss_dssp -------ECSSSEEEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEEECCSSEE---EEEECT-------TSSEE
T ss_pred -------eCCCCcceEEECCCCCEEEEEeC---CCCEEEEEECCCCcEEEEEecCCCcc---eEEECC-------CCCEE
Confidence 22335678999999997766543 34479999999988766554322211 111222 23334
Q ss_pred EEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecC
Q 004067 384 IWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 463 (776)
Q Consensus 384 ~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~ 463 (776)
++....++ .|++||+.+++..........+..+ .|+++|+.+++....... ..++.+++. .+. ....+..
T Consensus 173 ~~~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~~~~~~~--~~v~~~d~~-~~~----~~~~~~~ 242 (391)
T 1l0q_A 173 YVANFDSM--SISVIDTVTNSVIDTVKVEAAPSGI-AVNPEGTKAYVTNVDKYF--NTVSMIDTG-TNK----ITARIPV 242 (391)
T ss_dssp EEEETTTT--EEEEEETTTTEEEEEEECSSEEEEE-EECTTSSEEEEEEECSSC--CEEEEEETT-TTE----EEEEEEC
T ss_pred EEEeCCCC--EEEEEECCCCeEEEEEecCCCccce-EECCCCCEEEEEecCcCC--CcEEEEECC-CCe----EEEEEec
Confidence 45555566 8999999887765554444445554 499999998888752112 345556652 232 4455555
Q ss_pred CCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEeec
Q 004067 464 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 507 (776)
Q Consensus 464 ~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 507 (776)
+.....+.|+|||++|++..+.. ..|+++|..+++.+..+.
T Consensus 243 ~~~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 243 GPDPAGIAVTPDGKKVYVALSFX---NTVSVIDTATNTITATMA 283 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTTEEEEEEE
T ss_pred CCCccEEEEccCCCEEEEEcCCC---CEEEEEECCCCcEEEEEE
Confidence 55667889999999887776543 479999998887665553
No 155
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.77 E-value=1.9e-17 Score=171.51 Aligned_cols=223 Identities=17% Similarity=0.149 Sum_probs=142.7
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+...+...+|..+++..+.+++ .|.||++||++++.. + ......+...+|.|+++|+||+|.|.
T Consensus 14 ~~~~~~~~~~g~~l~~~~~g~~~-------g~~vvllHG~~~~~~----~----~~~~~~~~~~~~~vi~~D~~G~G~S~ 78 (317)
T 1wm1_A 14 YDSGWLDTGDGHRIYWELSGNPN-------GKPAVFIHGGPGGGI----S----PHHRQLFDPERYKVLLFDQRGCGRSR 78 (317)
T ss_dssp SEEEEEECSSSCEEEEEEEECTT-------SEEEEEECCTTTCCC----C----GGGGGGSCTTTEEEEEECCTTSTTCB
T ss_pred ceeeEEEcCCCcEEEEEEcCCCC-------CCcEEEECCCCCccc----c----hhhhhhccccCCeEEEECCCCCCCCC
Confidence 34556777788888887765422 256899999765432 1 01123344579999999999999885
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc------
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG------ 677 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~------ 677 (776)
... ........++.+.+..+++.. +.+++.|+||||||.+++.+|.++|++++++|+.++......
T Consensus 79 ~~~------~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 150 (317)
T 1wm1_A 79 PHA------SLDNNTTWHLVADIERLREMA--GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYY 150 (317)
T ss_dssp STT------CCTTCSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHH
T ss_pred CCc------ccccccHHHHHHHHHHHHHHc--CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHh
Confidence 321 011234566666666666553 345899999999999999999999999999999876432100
Q ss_pred -------cccc-------------------ccccccCC---------------------CCCCcc---------------
Q 004067 678 -------YDTF-------------------YTEKYMGL---------------------PSEDPV--------------- 695 (776)
Q Consensus 678 -------~~~~-------------------~~~~~~~~---------------------~~~~~~--------------- 695 (776)
.... +....... ......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (317)
T 1wm1_A 151 QDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFAR 230 (317)
T ss_dssp TSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHH
T ss_pred hccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHH
Confidence 0000 00000000 000000
Q ss_pred ---------chhc-CC-hhhhhccCC-CcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHH
Q 004067 696 ---------GYEY-SS-VMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIY 763 (776)
Q Consensus 696 ---------~~~~-~~-~~~~~~~i~-~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 763 (776)
.+.. .. ....+.+++ +|+|+++|++|..+++..+..+.+.+ .+.++++++++||....++...+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~----p~~~~~~i~~~gH~~~~~~~~~~ 306 (317)
T 1wm1_A 231 IENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW----PEAELHIVEGAGHSYDEPGILHQ 306 (317)
T ss_dssp HHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC----TTSEEEEETTCCSSTTSHHHHHH
T ss_pred hhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC----CCceEEEECCCCCCCCCcchHHH
Confidence 0000 11 233456675 99999999999999998888777765 45799999999998743334566
Q ss_pred HHHHHHHHHH
Q 004067 764 MEERIWEFIE 773 (776)
Q Consensus 764 ~~~~~~~fl~ 773 (776)
+...+.+|+.
T Consensus 307 ~~~~i~~f~~ 316 (317)
T 1wm1_A 307 LMIATDRFAG 316 (317)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 7777777764
No 156
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.77 E-value=1e-17 Score=171.57 Aligned_cols=212 Identities=12% Similarity=0.084 Sum_probs=138.7
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhcc
Q 004067 535 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC 614 (776)
Q Consensus 535 ~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~ 614 (776)
..+++....|.+ ..|.||++||.+++.. .|...+..|++.||.|+++|+||+|.|......
T Consensus 33 ~~l~y~~~G~~~------~g~~vvllHG~~~~~~-------~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~------ 93 (297)
T 2xt0_A 33 LRMHYVDEGPRD------AEHTFLCLHGEPSWSF-------LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDD------ 93 (297)
T ss_dssp CCEEEEEESCTT------CSCEEEEECCTTCCGG-------GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG------
T ss_pred eEEEEEEccCCC------CCCeEEEECCCCCcce-------eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCc------
Confidence 789888876532 1368999999876543 345567889999999999999999998643110
Q ss_pred CCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc--------cccc----
Q 004067 615 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY--------DTFY---- 682 (776)
Q Consensus 615 ~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~--------~~~~---- 682 (776)
..+.++++.+.+..+++.- +.+++.|+||||||.+++.+|.++|++++++|+.++....... ....
T Consensus 94 ~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (297)
T 2xt0_A 94 AVYTFGFHRRSLLAFLDAL--QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSP 171 (297)
T ss_dssp GGCCHHHHHHHHHHHHHHH--TCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCT
T ss_pred ccCCHHHHHHHHHHHHHHh--CCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhccc
Confidence 0123445554444444432 3468999999999999999999999999999998764311000 0000
Q ss_pred --------c-----------ccccCCCCCCc------cchhcC--------------Chhhhhc-cCCCcEEEEecCCCC
Q 004067 683 --------T-----------EKYMGLPSEDP------VGYEYS--------------SVMHHVH-KMKGKLLLVHGMIDE 722 (776)
Q Consensus 683 --------~-----------~~~~~~~~~~~------~~~~~~--------------~~~~~~~-~i~~P~lii~G~~D~ 722 (776)
. ..+.. +.... ..+... .....+. ++++|+|+++|++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~ 250 (297)
T 2xt0_A 172 DLDVGKLMQRAIPGITDAEVAAYDA-PFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDP 250 (297)
T ss_dssp TCCHHHHHHHHSTTCCHHHHHHHHT-TCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCS
T ss_pred ccchhHHHhccCccCCHHHHHHHhc-cccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCc
Confidence 0 00000 00000 000000 0112456 899999999999999
Q ss_pred ccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 723 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 723 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
.++ .....+.+.+. +.....+.++++||.. .. .++++.+.+.+||.
T Consensus 251 ~~~-~~~~~~~~~~p--~~~~~~~~~~~~GH~~-~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 251 VLG-PEVMGMLRQAI--RGCPEPMIVEAGGHFV-QE-HGEPIARAALAAFG 296 (297)
T ss_dssp SSS-HHHHHHHHHHS--TTCCCCEEETTCCSSG-GG-GCHHHHHHHHHHTT
T ss_pred ccC-hHHHHHHHhCC--CCeeEEeccCCCCcCc-cc-CHHHHHHHHHHHHh
Confidence 998 77777777662 2333444578999987 45 88899999999985
No 157
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.77 E-value=3.3e-18 Score=172.30 Aligned_cols=204 Identities=14% Similarity=0.035 Sum_probs=139.0
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
...|+||++||.+++.. .|..++..|+++||.|+++|+||+|.|...... ...++++.+.+..+++
T Consensus 10 ~~~~~vvllHG~~~~~~-------~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~-------~~~~~~~~~~~~~~l~ 75 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW-------CWYKIVALMRSSGHNVTALDLGASGINPKQALQ-------IPNFSDYLSPLMEFMA 75 (267)
T ss_dssp CCCCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGG-------CCSHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCcc-------hHHHHHHHHHhcCCeEEEeccccCCCCCCcCCc-------cCCHHHHHHHHHHHHH
Confidence 35689999999876644 345668889999999999999999988754211 1235566666655555
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc------------ccc-ccccc---CC--C---
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------TFY-TEKYM---GL--P--- 690 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~------------~~~-~~~~~---~~--~--- 690 (776)
... +.+++.|+||||||.+++.++.++|++++++|+.++........ ..+ ...+. .. +
T Consensus 76 ~l~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (267)
T 3sty_A 76 SLP-ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTT 154 (267)
T ss_dssp TSC-TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCE
T ss_pred hcC-CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccch
Confidence 431 35799999999999999999999999999999888754321100 000 00000 00 0
Q ss_pred --------------CCCccc------------------hhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHH
Q 004067 691 --------------SEDPVG------------------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 738 (776)
Q Consensus 691 --------------~~~~~~------------------~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 738 (776)
...... +............++|+|+++|++|..+++.....+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-- 232 (267)
T 3sty_A 155 LIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKN-- 232 (267)
T ss_dssp EECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHS--
T ss_pred hhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhC--
Confidence 000000 0000111111122479999999999999988887777765
Q ss_pred CCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 739 ARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 739 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
.++++++++++||.+ ..+.++++.+.+.+|++++
T Consensus 233 --~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 233 --PPDEVKEIEGSDHVT-MMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp --CCSEEEECTTCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred --CCceEEEeCCCCccc-cccChHHHHHHHHHHHHhc
Confidence 457999999999986 5567899999999999875
No 158
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.77 E-value=4.3e-18 Score=172.82 Aligned_cols=210 Identities=14% Similarity=0.118 Sum_probs=139.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.+|..+++..+. + . |.||++||.+++.. .|...+..|+++||.|+++|+||+|.|.....
T Consensus 10 ~~g~~l~y~~~g--~------~-~pvvllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~---- 69 (279)
T 1hkh_A 10 STPIELYYEDQG--S------G-QPVVLIHGYPLDGH-------SWERQTRELLAQGYRVITYDRRGFGGSSKVNT---- 69 (279)
T ss_dssp TEEEEEEEEEES--S------S-EEEEEECCTTCCGG-------GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS----
T ss_pred CCCeEEEEEecC--C------C-CcEEEEcCCCchhh-------HHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCC----
Confidence 466777766553 1 1 45899999876543 34556788999999999999999998864321
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCC-ceEEEEEcCCCCCccccc---------cc
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPVTSWDGYD---------TF 681 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~~v~~~~~~~~~~~~---------~~ 681 (776)
....+++.+.+..+++.. +.+++.++||||||.+++.+|.++|+ +++++|+.++........ ..
T Consensus 70 ----~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 1hkh_A 70 ----GYDYDTFAADLHTVLETL--DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEV 143 (279)
T ss_dssp ----CCSHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHH
T ss_pred ----CCCHHHHHHHHHHHHHhc--CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHH
Confidence 122444444444343332 34689999999999999999999998 999999988753311000 00
Q ss_pred ---------------c---cccccCC----C-CCCcc----------------------chhcCChhhhhccC---CCcE
Q 004067 682 ---------------Y---TEKYMGL----P-SEDPV----------------------GYEYSSVMHHVHKM---KGKL 713 (776)
Q Consensus 682 ---------------~---~~~~~~~----~-~~~~~----------------------~~~~~~~~~~~~~i---~~P~ 713 (776)
+ ...+... . ..... .+ ..+....+.++ ++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~~~P~ 222 (279)
T 1hkh_A 144 FDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAW-IEDFRSDVEAVRAAGKPT 222 (279)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHH-TCBCHHHHHHHHHHCCCE
T ss_pred HHHHHHHhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHH-hhchhhhHHHhccCCCCE
Confidence 0 0000000 0 00000 00 11222345677 8999
Q ss_pred EEEecCCCCccChHHH-HHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 714 LLVHGMIDENVHFRHT-ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 714 lii~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
|+++|++|..+|+..+ ..+.+.+ .+.+++++++++|.+ ..+.++++.+.+.+||.
T Consensus 223 lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 223 LILHGTKDNILPIDATARRFHQAV----PEADYVEVEGAPHGL-LWTHADEVNAALKTFLA 278 (279)
T ss_dssp EEEEETTCSSSCTTTTHHHHHHHC----TTSEEEEETTCCTTH-HHHTHHHHHHHHHHHHH
T ss_pred EEEEcCCCccCChHHHHHHHHHhC----CCeeEEEeCCCCccc-hhcCHHHHHHHHHHHhh
Confidence 9999999999998876 6665554 567999999999987 45678899999999986
No 159
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.1e-16 Score=169.42 Aligned_cols=344 Identities=10% Similarity=-0.021 Sum_probs=208.4
Q ss_pred CCceeEcCCCC-EEEEEeCCCCcCcceEEEEec----CCCc------eEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 004067 57 PTSIGFSPDDN-LITYLLSPDHSLSRKVFSFDP----KTCK------QELVFSPPDGGLDENNISPEEKLRRERLRERGL 125 (776)
Q Consensus 57 ~~~~~~SpDG~-~ia~~~~~~~~~~~~l~~~~~----~~~~------~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 125 (776)
+..++|||||+ +|+..+. ...|.+|++ .+++ ......+...+ ... ...+..
T Consensus 48 v~~~~~s~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------~~~~~~ 109 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEK-----NSVARLARIVETDQEGKKYWKLTIIAELRHPFAL----SAS---------SGKTTN 109 (425)
T ss_dssp CSEEEECSSCTTEEEEEET-----BTEEEEEEEEEC------CEEEEEEEEEECCCCC----C---------------CB
T ss_pred eEEEEECCCCCcEEEEecC-----CceEEEEEEecccCCccccccccccccccccccc----ccc---------ccCCCC
Confidence 48999999999 8886654 246999999 8777 33322221100 000 001123
Q ss_pred CeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCcee
Q 004067 126 GVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQR 203 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~ 203 (776)
.+....|+| ||+.|+.. .++.|++||..+.... .+..... .+..+.|+|||+.|+.... +.|.+|++.+++..
T Consensus 110 ~v~~~~~s~---~~~~l~~~~~dg~i~i~~~~~~~~~-~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 110 QVTCLAWSH---DGNSIVTGVENGELRLWNKTGALLN-VLNFHRA-PIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp CEEEEEECT---TSSEEEEEETTSCEEEEETTSCEEE-EECCCCS-CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred ceEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCeee-eccCCCc-cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 688999999 99999987 6788999996655555 6654443 4888999999999988875 67999999988765
Q ss_pred EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCC
Q 004067 204 QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNV 283 (776)
Q Consensus 204 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 283 (776)
............. ...........+..+.|+|++. ++....+
T Consensus 185 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------------------------------- 226 (425)
T 1r5m_A 185 QHFELKETGGSSI--NAENHSGDGSLGVDVEWVDDDK-FVIPGPK----------------------------------- 226 (425)
T ss_dssp EEECCC-----------------CCCBSCCEEEETTE-EEEECGG-----------------------------------
T ss_pred EEeeccccCccce--eeccccCCcceeeEEEEcCCCE-EEEEcCC-----------------------------------
Confidence 5433222100000 0000000011144677888865 4444322
Q ss_pred eEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE-eccCce
Q 004067 284 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSW 362 (776)
Q Consensus 284 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~ 362 (776)
..|++||+.+++..... ..+...+..++|+||++.++... .+..|.+||+.+++...... +.....
T Consensus 227 -g~i~~~d~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~i~ 293 (425)
T 1r5m_A 227 -GAIFVYQITEKTPTGKL--------IGHHGPISVLEFNDTNKLLLSAS----DDGTLRIWHGGNGNSQNCFYGHSQSIV 293 (425)
T ss_dssp -GCEEEEETTCSSCSEEE--------CCCSSCEEEEEEETTTTEEEEEE----TTSCEEEECSSSBSCSEEECCCSSCEE
T ss_pred -CeEEEEEcCCCceeeee--------ccCCCceEEEEECCCCCEEEEEc----CCCEEEEEECCCCccceEecCCCccEE
Confidence 34799999887654331 34566789999999999777665 34469999998876544333 222211
Q ss_pred eecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee-ccccCCeEEEEEEeecCCCcEEEEEEccCCCceee
Q 004067 363 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 441 (776)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~-~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~ 441 (776)
. +.+.+++++++...+| .|++|++..++.. .+..+...+..+. |+++|+.|+..+. ++ .+.
T Consensus 294 ~------------~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~-dg--~i~ 355 (425)
T 1r5m_A 294 S------------ASWVGDDKVISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGR-ISQDGQKYAVAFM-DG--QVN 355 (425)
T ss_dssp E------------EEEETTTEEEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEEE-ECTTSSEEEEEET-TS--CEE
T ss_pred E------------EEECCCCEEEEEeCCC--cEEEEECCCCcEeEecccCCccEEEEE-EcCCCCEEEEEEC-CC--eEE
Confidence 1 1222333666666667 8999998776543 4444455566554 9999997666554 33 377
Q ss_pred EEEEEeCCCCCC---------------ccccceeecCC--C-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcC
Q 004067 442 LYCAKLYPDWNH---------------TLEAPVKLTNG--K-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 498 (776)
Q Consensus 442 l~~~~~~~~g~~---------------~~~~~~~l~~~--~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~ 498 (776)
+|.+.. .... .......+..+ . .+..+.|+|||+.|+..... ..|.+|++.
T Consensus 356 i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~~ 424 (425)
T 1r5m_A 356 VYDLKK--LNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL----QEGSVVAIP 424 (425)
T ss_dssp EEECHH--HHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS----SCCEEEECC
T ss_pred EEECCC--CccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC----ceEEEEeec
Confidence 877763 1100 00023444444 3 57788999999988766543 347777763
No 160
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.77 E-value=2.8e-16 Score=164.14 Aligned_cols=243 Identities=12% Similarity=-0.025 Sum_probs=164.1
Q ss_pred CCeeeEEEeecCCCceEEEEeCCCcEEEEeCCCCccceecC---CCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLS---SSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLIN 200 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~---~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g 200 (776)
.++.+..|+| |++.+.-..++.|.+||+.+++....+. .+....+..++|||||+.|+..+. +.|.+||+.++
T Consensus 83 ~~v~~~~~s~---d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 83 AGVADLTWVG---ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp SCEEEEEEET---TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCEEEEEEeC---CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 3688999999 9887767789999999999887652221 122234788999999999998875 56999999998
Q ss_pred ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 201 EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 201 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
+..+....... .+..+.|+||++.++.....+
T Consensus 160 ~~~~~~~~h~~-----------------~V~~~~~~~~~~~~l~s~s~D------------------------------- 191 (344)
T 4gqb_B 160 VVLSSYRAHAA-----------------QVTCVAASPHKDSVFLSCSED------------------------------- 191 (344)
T ss_dssp EEEEEECCCSS-----------------CEEEEEECSSCTTEEEEEETT-------------------------------
T ss_pred cEEEEEcCcCC-----------------ceEEEEecCCCCCceeeeccc-------------------------------
Confidence 76543322211 145788999997665433221
Q ss_pred CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCCCceE-EEEEec
Q 004067 281 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRK-VILVEE 358 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~ 358 (776)
..|.+||+.+++....-.. ..+...+..+.|+|++. +++..+ .+..|.+||+.+++.. .+..+.
T Consensus 192 ----~~v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~p~~~~~l~sg~----~dg~v~~wd~~~~~~~~~~~~h~ 257 (344)
T 4gqb_B 192 ----NRILLWDTRCPKPASQIGC------SAPGYLPTSLAWHPQQSEVFVFGD----ENGTVSLVDTKSTSCVLSSAVHS 257 (344)
T ss_dssp ----SCEEEEETTSSSCEEECC----------CCCEEEEEECSSCTTEEEEEE----TTSEEEEEESCC--CCEEEECCS
T ss_pred ----cccccccccccceeeeeec------ceeeccceeeeecCCCCcceEEec----cCCcEEEEECCCCcEEEEEcCCC
Confidence 2378999998875443111 23344578899999765 555544 3557999999988754 343333
Q ss_pred cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCc
Q 004067 359 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL 438 (776)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~ 438 (776)
...... .|+| ++..++++...++ .|++||+.+++...+..+...|..+. |+|+|+.++++...++.
T Consensus 258 ~~v~~v---~fsp-------~g~~~lasgs~D~--~i~vwd~~~~~~~~~~~H~~~V~~v~-~sp~~~~llas~s~D~~- 323 (344)
T 4gqb_B 258 QCVTGL---VFSP-------HSVPFLASLSEDC--SLAVLDSSLSELFRSQAHRDFVRDAT-WSPLNHSLLTTVGWDHQ- 323 (344)
T ss_dssp SCEEEE---EECS-------SSSCCEEEEETTS--CEEEECTTCCEEEEECCCSSCEEEEE-ECSSSTTEEEEEETTSC-
T ss_pred CCEEEE---EEcc-------CCCeEEEEEeCCC--eEEEEECCCCcEEEEcCCCCCEEEEE-EeCCCCeEEEEEcCCCe-
Confidence 332221 2333 2334666666677 89999999998877777777777765 99999988888777764
Q ss_pred eeeEEEEEe
Q 004067 439 ESHLYCAKL 447 (776)
Q Consensus 439 ~~~l~~~~~ 447 (776)
+.+|.++.
T Consensus 324 -v~~w~v~~ 331 (344)
T 4gqb_B 324 -VVHHVVPT 331 (344)
T ss_dssp -EEEEECCC
T ss_pred -EEEEECCC
Confidence 78887764
No 161
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.77 E-value=2.3e-16 Score=163.47 Aligned_cols=278 Identities=13% Similarity=0.086 Sum_probs=186.7
Q ss_pred CCceeEcCC----CCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 57 PTSIGFSPD----DNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 57 ~~~~~~SpD----G~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
+..++|+|+ |+.|+-.+. ...|.+|++.+++........ .+..++....|
T Consensus 35 V~~v~~~~~~~~~~~~l~tgs~-----D~~v~vW~~~~~~~~~~~~l~---------------------gh~~~v~~~~~ 88 (321)
T 3ow8_A 35 IWSVAWGTNKKENSETVVTGSL-----DDLVKVWKWRDERLDLQWSLE---------------------GHQLGVVSVDI 88 (321)
T ss_dssp EEEEEEC-------CEEEEEET-----TSCEEEEEEETTEEEEEEEEC---------------------CCSSCEEEEEE
T ss_pred EEEEEEecCCCCCCCEEEEEcC-----CCCEEEEECCCCCeeeeeeec---------------------cCCCCEEEEEE
Confidence 578999986 567775443 246889998877643321110 11247889999
Q ss_pred eecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCC
Q 004067 133 VKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGAN 210 (776)
Q Consensus 133 sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~ 210 (776)
+| ++..++.. .++.|.+||+.+++....+..... .+..+.|||||+.|+.... +.+.++++.+++.........
T Consensus 89 ~~---~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~ 164 (321)
T 3ow8_A 89 SH---TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV-DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG 164 (321)
T ss_dssp CS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCTT-CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS
T ss_pred CC---CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC
Confidence 99 99988876 788999999999877634544433 4778999999999988764 579999999887654332221
Q ss_pred CCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEE
Q 004067 211 GNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVV 290 (776)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~ 290 (776)
. .+..++|+|||+.|+....+ ..|.+|
T Consensus 165 ~-----------------~v~~~~~spdg~~lasg~~d------------------------------------g~i~iw 191 (321)
T 3ow8_A 165 K-----------------FILSIAYSPDGKYLASGAID------------------------------------GIINIF 191 (321)
T ss_dssp S-----------------CEEEEEECTTSSEEEEEETT------------------------------------SCEEEE
T ss_pred c-----------------eEEEEEECCCCCEEEEEcCC------------------------------------CeEEEE
Confidence 1 14478899999999877643 237999
Q ss_pred EcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE-eccCceeeccccc
Q 004067 291 SAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVNLHDCF 369 (776)
Q Consensus 291 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~ 369 (776)
|+.+++....- ..+...+..++|+|||+.|+..+ .+..|.+||+.++....... +...... -.|
T Consensus 192 d~~~~~~~~~~--------~~h~~~v~~l~~spd~~~l~s~s----~dg~i~iwd~~~~~~~~~~~~h~~~v~~---~~~ 256 (321)
T 3ow8_A 192 DIATGKLLHTL--------EGHAMPIRSLTFSPDSQLLVTAS----DDGYIKIYDVQHANLAGTLSGHASWVLN---VAF 256 (321)
T ss_dssp ETTTTEEEEEE--------CCCSSCCCEEEECTTSCEEEEEC----TTSCEEEEETTTCCEEEEECCCSSCEEE---EEE
T ss_pred ECCCCcEEEEE--------cccCCceeEEEEcCCCCEEEEEc----CCCeEEEEECCCcceeEEEcCCCCceEE---EEE
Confidence 99988754431 34566788899999999877665 34569999998877644332 2222111 123
Q ss_pred ccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 370 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 370 ~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
+| ++.+++++..+| .|.+||+.+++ ...+..+...+..+. |+++|+.|+.. ..++. +.+|..+
T Consensus 257 sp--------~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~h~~~v~~v~-~s~~g~~l~s~-~~d~~--i~vwd~p 320 (321)
T 3ow8_A 257 CP--------DDTHFVSSSSDK--SVKVWDVGTRTCVHTFFDHQDQVWGVK-YNGNGSKIVSV-GDDQE--IHIYDCP 320 (321)
T ss_dssp CT--------TSSEEEEEETTS--CEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSEEEEE-ETTCC--EEEEECC
T ss_pred CC--------CCCEEEEEeCCC--cEEEEeCCCCEEEEEEcCCCCcEEEEE-ECCCCCEEEEE-eCCCe--EEEEeCC
Confidence 33 234566666677 89999987765 445555666676665 99999976544 44443 7888753
No 162
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.77 E-value=7.7e-19 Score=176.93 Aligned_cols=205 Identities=11% Similarity=0.059 Sum_probs=139.6
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
..|+||++||.+++.. .|..++..|++ ||.|+++|+||+|.+....... ......+++.+.+..+++.
T Consensus 19 ~~p~vv~~HG~~~~~~-------~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~----~~~~~~~~~~~~~~~~~~~ 86 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQS-------AWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDF----RRYTTLDPYVDDLLHILDA 86 (269)
T ss_dssp CSSEEEEECCTTCCGG-------GGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCT----TTCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCcHH-------HHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCc----cccCcHHHHHHHHHHHHHh
Confidence 3489999999876643 23345677777 9999999999999885421111 1112355666666666554
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc--------------------------ccccc
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF--------------------------YTEKY 686 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~--------------------------~~~~~ 686 (776)
. +.+++.|+||||||.+++.++.++|++++++++.+|...+...... +....
T Consensus 87 ~--~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (269)
T 4dnp_A 87 L--GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLA 164 (269)
T ss_dssp T--TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred c--CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhh
Confidence 3 4458999999999999999999999999999999886542110000 00000
Q ss_pred cCCCCC-------------Cc-------cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEE
Q 004067 687 MGLPSE-------------DP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 746 (776)
Q Consensus 687 ~~~~~~-------------~~-------~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 746 (776)
...... .. ..+...+....+.++++|+|+++|++|..+++..+..+.+.+ ...++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~ 241 (269)
T 4dnp_A 165 VGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHL---GGKNTVH 241 (269)
T ss_dssp HCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHS---SSCEEEE
T ss_pred ccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhC---CCCceEE
Confidence 000000 00 001122334557788999999999999999999888888776 2238999
Q ss_pred EecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 747 IFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 747 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
++++++|.. ..+.++++.+.+.+||+++
T Consensus 242 ~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 242 WLNIEGHLP-HLSAPTLLAQELRRALSHR 269 (269)
T ss_dssp EEEEESSCH-HHHCHHHHHHHHHHHHC--
T ss_pred EeCCCCCCc-cccCHHHHHHHHHHHHhhC
Confidence 999999986 4567888999999999763
No 163
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.76 E-value=1.4e-17 Score=169.60 Aligned_cols=218 Identities=13% Similarity=0.064 Sum_probs=141.3
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCC-CcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhh
Q 004067 530 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGP-CVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 608 (776)
Q Consensus 530 ~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~-~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~ 608 (776)
...+|..+++....+. ..|+||++||.+ +... .. .|...+..|++. |.|+++|+||+|.|.....
T Consensus 12 ~~~~g~~l~y~~~g~~-------g~p~vvllHG~~~~~~~-~~----~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~- 77 (285)
T 1c4x_A 12 FPSGTLASHALVAGDP-------QSPAVVLLHGAGPGAHA-AS----NWRPIIPDLAEN-FFVVAPDLIGFGQSEYPET- 77 (285)
T ss_dssp ECCTTSCEEEEEESCT-------TSCEEEEECCCSTTCCH-HH----HHGGGHHHHHTT-SEEEEECCTTSTTSCCCSS-
T ss_pred EEECCEEEEEEecCCC-------CCCEEEEEeCCCCCCcc-hh----hHHHHHHHHhhC-cEEEEecCCCCCCCCCCCC-
Confidence 3347777888766431 126799999964 2111 11 234446677665 9999999999998864211
Q ss_pred hhhhccCCccHHHH----HHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc------
Q 004067 609 SIKHNCGRIDAEDQ----LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY------ 678 (776)
Q Consensus 609 ~~~~~~~~~~~~D~----~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------ 678 (776)
....++++ .+.+..+++.. +.+++.|+||||||.+++.+|.++|++++++|+.+|.......
T Consensus 78 ------~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 149 (285)
T 1c4x_A 78 ------YPGHIMSWVGMRVEQILGLMNHF--GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELA 149 (285)
T ss_dssp ------CCSSHHHHHHHHHHHHHHHHHHH--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHH
T ss_pred ------cccchhhhhhhHHHHHHHHHHHh--CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHH
Confidence 01234444 44444444432 3368999999999999999999999999999998875421000
Q ss_pred --cccc-----------cccccCCCCCC--c-c----ch---------h---------------cCChhhhhccCCCcEE
Q 004067 679 --DTFY-----------TEKYMGLPSED--P-V----GY---------E---------------YSSVMHHVHKMKGKLL 714 (776)
Q Consensus 679 --~~~~-----------~~~~~~~~~~~--~-~----~~---------~---------------~~~~~~~~~~i~~P~l 714 (776)
...+ ...+...+... . . .+ . .......+.++++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 229 (285)
T 1c4x_A 150 RLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVL 229 (285)
T ss_dssp HHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEE
T ss_pred HHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEE
Confidence 0000 00000011000 0 0 00 0 0012234678889999
Q ss_pred EEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 715 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 715 ii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
+++|++|..+|+..+..+.+.+ .+.++++++++||.+ ..+.++++.+.+.+||.+
T Consensus 230 ii~G~~D~~~p~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 230 VFHGRQDRIVPLDTSLYLTKHL----KHAELVVLDRCGHWA-QLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp EEEETTCSSSCTHHHHHHHHHC----SSEEEEEESSCCSCH-HHHSHHHHHHHHHHHHHC
T ss_pred EEEeCCCeeeCHHHHHHHHHhC----CCceEEEeCCCCcch-hhcCHHHHHHHHHHHHhc
Confidence 9999999999999888777754 568999999999976 456788899999999975
No 164
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.76 E-value=5.4e-18 Score=188.84 Aligned_cols=235 Identities=17% Similarity=0.179 Sum_probs=165.9
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhh-HHHHhCCcEEEEECCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rg~g~ 601 (776)
..+.+.|++.||..|.+.+|.|+.. +++|+||++||......... .+...+ +.|+++||+|+.+|+||+|+
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~~----~~~P~vv~~~~~g~~~~~~~----~y~~~~~~~la~~Gy~vv~~D~RG~G~ 79 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDAD----GPVPVLLVRNPYDKFDVFAW----STQSTNWLEFVRDGYAVVIQDTRGLFA 79 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECCS----SCEEEEEEEESSCTTCHHHH----HTTTCCTHHHHHTTCEEEEEECTTSTT
T ss_pred EEEEEEEECCCCCEEEEEEEECCCC----CCeeEEEEECCcCCCccccc----cchhhHHHHHHHCCCEEEEEcCCCCCC
Confidence 4567899999999999999999763 57899999998544322110 111124 78999999999999999999
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCC-CCccc---
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV-TSWDG--- 677 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~-~~~~~--- 677 (776)
|+..+.. + ..+.+|+.++++++.++++.+ .+|+++|+||||++++.+++.+++.++++|+.++. .++..
T Consensus 80 S~g~~~~-----~-~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~ 152 (587)
T 3i2k_A 80 SEGEFVP-----H-VDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWY 152 (587)
T ss_dssp CCSCCCT-----T-TTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCS
T ss_pred CCCcccc-----c-cchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccccccee
Confidence 9765432 1 246899999999999887655 79999999999999999999999999999999887 65321
Q ss_pred c-ccc--------ccc--------------------------------ccc-CCCC---------------------CCc
Q 004067 678 Y-DTF--------YTE--------------------------------KYM-GLPS---------------------EDP 694 (776)
Q Consensus 678 ~-~~~--------~~~--------------------------------~~~-~~~~---------------------~~~ 694 (776)
+ ... |.. .++ ..+. ...
T Consensus 153 ~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (587)
T 3i2k_A 153 GPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDND 232 (587)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCSCC
T ss_pred ecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCCCC
Confidence 0 000 000 000 0010 012
Q ss_pred cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCC---------CCCcHH---
Q 004067 695 VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR---------RHRDRI--- 762 (776)
Q Consensus 695 ~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---------~~~~~~--- 762 (776)
..|...++...+.+|++|+|+++|..|..+ ..+.++++++...++ ..+++-|. .|... .+....
T Consensus 233 ~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~~~~~~~~ 308 (587)
T 3i2k_A 233 ESWQSISLFERLGGLATPALITAGWYDGFV--GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGIAATYPIQ 308 (587)
T ss_dssp HHHHTTCCHHHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCGGGSCCHH
T ss_pred hHHhcCChhhhhccCCCCEEEEccCCCccc--hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCCccccccc
Confidence 335556677788999999999999999764 356788898876554 35666554 46421 111112
Q ss_pred HHHHHHHHHHHHhC
Q 004067 763 YMEERIWEFIERTL 776 (776)
Q Consensus 763 ~~~~~~~~fl~~~l 776 (776)
+..+.+.+||++||
T Consensus 309 ~~~~~~~~wFD~~L 322 (587)
T 3i2k_A 309 EATTMHKAFFDRHL 322 (587)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHh
Confidence 33488999999886
No 165
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.76 E-value=1.4e-16 Score=167.77 Aligned_cols=291 Identities=11% Similarity=-0.009 Sum_probs=181.5
Q ss_pred CCceeEcCCCCEEEEEeCCCCc-CcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 57 PTSIGFSPDDNLITYLLSPDHS-LSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
+..++|||||++||-.+..... ....|++|+..++......... ...+..++....|+|
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~-------------------~~~~~~~V~~~~~s~- 104 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTA-------------------GVQTEAGVTDVAWVS- 104 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSE-------------------EEECSSCEEEEEEET-
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecc-------------------cCCCCCCEEEEEEcC-
Confidence 4789999999999977653211 1357999998776542111000 001124688999999
Q ss_pred CCCceEEEEeCCCcEEEEeCCCCccceecC---CCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCC
Q 004067 136 SSKKKIIMVPLPDGIYFQDLSCSKPELKLS---SSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 136 ~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~---~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~ 211 (776)
|++.|+-..++.|.+||+.+++...... ......+..++|||||+.|+.... +.|.+||+.+++..........
T Consensus 105 --d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~ 182 (357)
T 4g56_B 105 --EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS 182 (357)
T ss_dssp --TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred --CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence 9998888899999999999887541111 112234788999999999988775 5799999999876554332211
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
.+..++|+|+++.++...... ..|.+||
T Consensus 183 -----------------~v~~v~~s~~~~~~~~s~~~d-----------------------------------g~v~~wd 210 (357)
T 4g56_B 183 -----------------EVNCVAACPGKDTIFLSCGED-----------------------------------GRILLWD 210 (357)
T ss_dssp -----------------CEEEEEECTTCSSCEEEEETT-----------------------------------SCEEECC
T ss_pred -----------------CEEEEEEccCCCceeeeeccC-----------------------------------CceEEEE
Confidence 145788999997554433221 2378899
Q ss_pred cCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCCCceEEEEE-eccCceeeccccc
Q 004067 292 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVNLHDCF 369 (776)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~ 369 (776)
+.+++...... .......+..++|+|++. +++... .+..|.+||+.+++...... +....... .|
T Consensus 211 ~~~~~~~~~~~------~~~~~~~v~~v~~sp~~~~~la~g~----~d~~i~~wd~~~~~~~~~~~~~~~~v~~l---~~ 277 (357)
T 4g56_B 211 TRKPKPATRID------FCASDTIPTSVTWHPEKDDTFACGD----ETGNVSLVNIKNPDSAQTSAVHSQNITGL---AY 277 (357)
T ss_dssp TTSSSCBCBCC------CTTCCSCEEEEEECTTSTTEEEEEE----SSSCEEEEESSCGGGCEEECCCSSCEEEE---EE
T ss_pred CCCCceeeeee------eccccccccchhhhhcccceEEEee----cccceeEEECCCCcEeEEEeccceeEEEE---EE
Confidence 98876543211 134456688999999865 555444 34459999998887544332 22222211 23
Q ss_pred ccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecC-CCcEEEEEEccCCCceeeEEEEEe
Q 004067 370 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNE-ASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 370 ~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~-dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
+| +++.++++...+| .|++||+++++..+...+...|..+. |+| |++. +++...++. +.+|.++.
T Consensus 278 sp-------~~~~~lasgs~D~--~i~iwd~~~~~~~~~~~H~~~V~~va-fsP~d~~~-l~s~s~Dg~--v~iW~~~~ 343 (357)
T 4g56_B 278 SY-------HSSPFLASISEDC--TVAVLDADFSEVFRDLSHRDFVTGVA-WSPLDHSK-FTTVGWDHK--VLHHHLPS 343 (357)
T ss_dssp CS-------SSSCCEEEEETTS--CEEEECTTSCEEEEECCCSSCEEEEE-ECSSSTTE-EEEEETTSC--EEEEECC-
T ss_pred cC-------CCCCEEEEEeCCC--EEEEEECCCCcEeEECCCCCCEEEEE-EeCCCCCE-EEEEcCCCe--EEEEECCC
Confidence 33 2334666666677 89999999888776666666677765 998 6775 455555544 78888764
No 166
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.76 E-value=1.5e-17 Score=170.50 Aligned_cols=241 Identities=12% Similarity=0.052 Sum_probs=155.8
Q ss_pred CCceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCC
Q 004067 522 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 600 (776)
Q Consensus 522 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g 600 (776)
.+.+.+++.++ .+..+.++ +.|.. +++|+|+++||+++... ...|... ..+.+.+++.||+|+++|.+++.
T Consensus 7 ~~v~~~~~~S~~~~~~i~v~-~~p~~-----~~~p~vvllHG~~~~~~-~~~w~~~-~~~~~~~~~~~~~vv~p~~~~~~ 78 (304)
T 1sfr_A 7 LPVEYLQVPSPSMGRDIKVQ-FQSGG-----ANSPALYLLDGLRAQDD-FSGWDIN-TPAFEWYDQSGLSVVMPVGGQSS 78 (304)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS-----TTBCEEEEECCTTCCSS-SCHHHHH-CCHHHHHTTSSCEEEEECCCTTC
T ss_pred ceEEEEEEECccCCCceEEE-ECCCC-----CCCCEEEEeCCCCCCCC-cchhhcC-CCHHHHHhcCCeEEEEECCCCCc
Confidence 35677888876 46677777 54543 47899999999742111 1123211 11246677889999999998653
Q ss_pred CCchhhhhh--hhhccCCccHHHH--HHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc
Q 004067 601 RRGLKFEAS--IKHNCGRIDAEDQ--LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 676 (776)
Q Consensus 601 ~~~~~~~~~--~~~~~~~~~~~D~--~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~ 676 (776)
.+.. +... ...........++ .+.+.++.++..++.++++|+|+||||++|+.++.++|++|+++++++|..++.
T Consensus 79 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 79 FYSD-WYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (304)
T ss_dssp TTCB-CSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred cccc-cCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcc
Confidence 3211 1000 0000001223333 234444544344677799999999999999999999999999999999987654
Q ss_pred ccc--cc----------c-cccccCCCCCCccchhcCChhhhhccC---CCcEEEEecCCCC--------------ccCh
Q 004067 677 GYD--TF----------Y-TEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDE--------------NVHF 726 (776)
Q Consensus 677 ~~~--~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~P~lii~G~~D~--------------~v~~ 726 (776)
... .. + ....++.+. ...+...++...+.++ ..|+++++|+.|. .++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~ 235 (304)
T 1sfr_A 158 QAMGPTLIGLAMGDAGGYKASDMWGPKE--DPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVR 235 (304)
T ss_dssp STTHHHHHHHHHHHTTSCCHHHHHCSTT--STHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHH
T ss_pred ccchhhhhhHhhhhccccchHHhcCCcc--hhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHH
Confidence 310 00 0 011112221 2345555665555554 5799999999998 6678
Q ss_pred HHHHHHHHHHHHCC-CCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 727 RHTARLINALVAAR-KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 727 ~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
..+.++++.|++.| .++++.+|++++|.+. .....+..++.||.++|
T Consensus 236 ~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l 283 (304)
T 1sfr_A 236 TSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRAL 283 (304)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhc
Confidence 89999999999999 9999999987799652 24455677788887653
No 167
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.76 E-value=6.3e-17 Score=163.63 Aligned_cols=255 Identities=11% Similarity=0.149 Sum_probs=189.8
Q ss_pred eEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCce
Q 004067 61 GFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKK 140 (776)
Q Consensus 61 ~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~ 140 (776)
-|++||++|+|....+ ...||+++.++.+.++|+. ...-.+++ +|+
T Consensus 20 ~~~~~g~~iy~~n~~d---~~~ly~~~~dg~~~~~l~~----------------------------~~~~~i~~---~g~ 65 (302)
T 3s25_A 20 LFCESDGEVFFSNTND---NGRLYAMNIDGSNIHKLSN----------------------------DTAMYINA---DKN 65 (302)
T ss_dssp CEEEETTEEEEEEGGG---TTEEEEEETTSCSCEEEEE----------------------------EEEEEEEE---CSS
T ss_pred EEEEeCCEEEEEeCCC---CceEEEEcCCCCCCEEccC----------------------------CceeeEEE---cCC
Confidence 4799999999987643 2589999999999999985 22345788 999
Q ss_pred EEEEeC---------------CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE---C--CcEEEEecCCC
Q 004067 141 IIMVPL---------------PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR---D--CELHVLNLLIN 200 (776)
Q Consensus 141 ~l~~~~---------------~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~---~--~~l~~~~l~~g 200 (776)
+|+|.. ...||++++++++.+ +|+.... ..|+|+|++|+|+. . ..||++++++.
T Consensus 66 ~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~~~~-----~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs 139 (302)
T 3s25_A 66 YVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDPDPC-----IYASLIGNYIYYLHYDTQTATSLYRIRIDGE 139 (302)
T ss_dssp EEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEECSCE-----EEEEEETTEEEEEEESSSSCEEEEEEETTSC
T ss_pred EEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-EeecCCc-----cEEEEeCCEEEEEeecCCCCceEEEEECCCC
Confidence 999983 246999999999987 7765432 37999999999997 2 36999999998
Q ss_pred ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 201 EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 201 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
+.++|+.... ..++|+|+.|+|... +.
T Consensus 140 ~~~~lt~~~~----------------------~~~~~~g~~iy~t~~--g~----------------------------- 166 (302)
T 3s25_A 140 EKKKIKNHYL----------------------FTCNTSDRYFYYNNP--KN----------------------------- 166 (302)
T ss_dssp CCEEEESSCC----------------------CCSEEETTEEEEECT--TT-----------------------------
T ss_pred CeEEEeCCCc----------------------eEeeEECCEEEEEeC--CC-----------------------------
Confidence 8888886532 236889999998753 11
Q ss_pred CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccC
Q 004067 281 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD 360 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 360 (776)
.+|++.+++++..+++.. ... ..+ ++|+|+.|+++.... ...|++.+++++..+.|++...+
T Consensus 167 ----~~Iy~~~l~g~~~~~l~~---------~~~--~~~-~~P~g~~iy~t~~~~--~~~I~~~~ldG~~~~~Lt~~~~~ 228 (302)
T 3s25_A 167 ----GQLYRYDTASQSEALFYD---------CNC--YKP-VVLDDTNVYYMDVNR--DNAIVHVNINNPNPVVLTEANIE 228 (302)
T ss_dssp ----CCEEEEETTTTEEEEEEC---------SCE--EEE-EEEETTEEEEEEGGG--TTEEEEECSSSCCCEECSCSCEE
T ss_pred ----ceEEEEECCCCCEEEEeC---------CCc--cce-eeecCCEEEEEEcCC--CcEEEEEECCCCCeEEEeCCCcc
Confidence 358999999988777721 111 123 569999888876433 26799999999998888654322
Q ss_pred ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCcee
Q 004067 361 SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 440 (776)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~ 440 (776)
| + +..++.++|.++..+ ..|++++++|...++|+.++. . .+++.+++|||+....+
T Consensus 229 -~------~-------~~~g~~Iy~~~~~~~-~~i~~~~~DG~~r~~l~~~~~--~---~i~i~~d~Iy~td~~~~---- 284 (302)
T 3s25_A 229 -H------Y-------NVYGSLIFYQRGGDN-PALCVVKNDGTGFKELAKGEF--C---NINVTSQYVYFTDFVSN---- 284 (302)
T ss_dssp -E------E-------EEETTEEEEEECSSS-CEEEEEETTSCCCEEEEESCE--E---EEEECSSEEEEEETTTC----
T ss_pred -e------E-------EECCCEEEEEECCCC-cEEEEEECCCCccEEeeCCcc--c---eEEEeCCEEEEEECCCC----
Confidence 2 2 234566877766543 799999999999888887642 1 36778899999976543
Q ss_pred eEEEEEeCCCCC
Q 004067 441 HLYCAKLYPDWN 452 (776)
Q Consensus 441 ~l~~~~~~~~g~ 452 (776)
.|+++++ +|+
T Consensus 285 ~i~~~~~--dGs 294 (302)
T 3s25_A 285 KEYCTST--QNP 294 (302)
T ss_dssp CEEEEES--SSC
T ss_pred eEEEEEC--CCC
Confidence 4899998 676
No 168
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.76 E-value=1.1e-17 Score=174.64 Aligned_cols=242 Identities=14% Similarity=0.144 Sum_probs=153.2
Q ss_pred CceEEEEEcCC--C--cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCccccccccc-ccchhhhHHHH-hCCcEEEEECC
Q 004067 523 PPDIVQIQAND--G--TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI-NTVDMRAQYLR-SKGILVWKLDN 596 (776)
Q Consensus 523 ~~~~~~~~~~d--g--~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~-~~~~~~~~~l~-~~G~~v~~~d~ 596 (776)
+..++.+.+.| | ..+.++++.|.+. .++.|+|++.||......-...+. ......+..|+ ++||+|+++|+
T Consensus 42 ~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~---~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~ 118 (377)
T 4ezi_A 42 QLYKINYKTQSPDGNLTIASGLVAMPIHP---VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDY 118 (377)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEESSC---SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEECCCC---CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCC
Confidence 45567776654 4 4588999999874 257899999999763211000000 00112355677 99999999999
Q ss_pred CCCCCCch---hhhhhhhhccCCccHHHHHHHHHHHHHcCCC-CCCcEEEEeechHHHHHHHHHhhCCC-----ceEEEE
Q 004067 597 RGTARRGL---KFEASIKHNCGRIDAEDQLTGAEWLIKQGLA-KVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAV 667 (776)
Q Consensus 597 rg~g~~~~---~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~i-d~~~i~l~G~S~GG~~a~~~a~~~~~-----~~~~~v 667 (776)
||+|.++. .+..... ....+.|.++++..+.....+ +.++++++||||||++++.++..+|+ .+.+++
T Consensus 119 rG~G~s~~~~~~~~~~~~---~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~ 195 (377)
T 4ezi_A 119 LGLGDNELTLHPYVQAET---LASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVA 195 (377)
T ss_dssp TTSTTCCCSSCCTTCHHH---HHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEE
T ss_pred CCCCCCCCCCcccccchh---HHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEE
Confidence 99998874 2211110 011244555555444443233 56899999999999999999886543 478888
Q ss_pred EcCCCCCcccc----c----------------------cccc--ccccC-----------------------CCCCCccc
Q 004067 668 SGAPVTSWDGY----D----------------------TFYT--EKYMG-----------------------LPSEDPVG 696 (776)
Q Consensus 668 ~~~~~~~~~~~----~----------------------~~~~--~~~~~-----------------------~~~~~~~~ 696 (776)
+.++..+.... . ..|. ..++. .+......
T Consensus 196 ~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (377)
T 4ezi_A 196 PGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLI 275 (377)
T ss_dssp EESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGG
T ss_pred ecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHH
Confidence 88877663210 0 0000 00000 00000000
Q ss_pred ----hh---c--CCh-hhh--------hccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecC--CCCCCC
Q 004067 697 ----YE---Y--SSV-MHH--------VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD--ERHMPR 756 (776)
Q Consensus 697 ----~~---~--~~~-~~~--------~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~~ 756 (776)
+. . .++ +.. ...++.|+|++||..|.++|+.++.++++++++.|. ++++++++ .+|...
T Consensus 276 ~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~ 354 (377)
T 4ezi_A 276 FQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQA 354 (377)
T ss_dssp BCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTT
T ss_pred hchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccCh
Confidence 00 0 111 100 114468999999999999999999999999999999 99999999 899752
Q ss_pred CCCcHHHHHHHHHHHHHHh
Q 004067 757 RHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 757 ~~~~~~~~~~~~~~fl~~~ 775 (776)
.......+.+||+++
T Consensus 355 ----~~~~~~~~~~wl~~~ 369 (377)
T 4ezi_A 355 ----HPFVLKEQVDFFKQF 369 (377)
T ss_dssp ----HHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHh
Confidence 456678889999876
No 169
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.76 E-value=1.4e-17 Score=169.56 Aligned_cols=209 Identities=13% Similarity=0.093 Sum_probs=140.1
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCC---Ccccccccccccchhhh-HHHHhCCcEEEEECCCCCCCCchhhhhhh
Q 004067 535 TVLYGALYKPDESRYGPPPYKTLISVYGGP---CVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTARRGLKFEASI 610 (776)
Q Consensus 535 ~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~---~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rg~g~~~~~~~~~~ 610 (776)
.++++....+ .|.||++||.+ ++.. .|...+ ..|++. |.|+++|+||+|.|.....
T Consensus 23 ~~l~y~~~G~---------g~~vvllHG~~~~~~~~~-------~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~--- 82 (286)
T 2puj_A 23 FNIHYNEAGN---------GETVIMLHGGGPGAGGWS-------NYYRNVGPFVDAG-YRVILKDSPGFNKSDAVVM--- 82 (286)
T ss_dssp EEEEEEEECC---------SSEEEEECCCSTTCCHHH-------HHTTTHHHHHHTT-CEEEEECCTTSTTSCCCCC---
T ss_pred EEEEEEecCC---------CCcEEEECCCCCCCCcHH-------HHHHHHHHHHhcc-CEEEEECCCCCCCCCCCCC---
Confidence 7788776531 26799999974 3321 233446 677765 9999999999998864211
Q ss_pred hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc------c---cc--
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD------G---YD-- 679 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~------~---~~-- 679 (776)
..+.++++.+.+..++++. +.+++.|+||||||.+|+.+|.++|++++++|+.+|..... . ..
T Consensus 83 ----~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 156 (286)
T 2puj_A 83 ----DEQRGLVNARAVKGLMDAL--DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLL 156 (286)
T ss_dssp ----SSCHHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHH
T ss_pred ----cCcCHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHH
Confidence 0223555655555555543 34689999999999999999999999999999988754210 0 00
Q ss_pred -ccc-----------cccccCCCC-CCc----cchh----------------------cCChhhhhccCCCcEEEEecCC
Q 004067 680 -TFY-----------TEKYMGLPS-EDP----VGYE----------------------YSSVMHHVHKMKGKLLLVHGMI 720 (776)
Q Consensus 680 -~~~-----------~~~~~~~~~-~~~----~~~~----------------------~~~~~~~~~~i~~P~lii~G~~ 720 (776)
..+ .......+. ... ..+. ..+....+.++++|+|+++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~ 236 (286)
T 2puj_A 157 FKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRD 236 (286)
T ss_dssp HHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETT
T ss_pred HHHhhCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECC
Confidence 000 000000000 000 0000 0112235678889999999999
Q ss_pred CCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 721 DENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 721 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
|..+|+..+..+.+.+ .+.++++++++||.. ..+.++++.+.+.+||.+
T Consensus 237 D~~~p~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 237 DRFVPLDHGLKLLWNI----DDARLHVFSKCGAWA-QWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp CSSSCTHHHHHHHHHS----SSEEEEEESSCCSCH-HHHTHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHC----CCCeEEEeCCCCCCc-cccCHHHHHHHHHHHHhc
Confidence 9999998888777665 567999999999976 456788899999999975
No 170
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.76 E-value=2.3e-18 Score=174.72 Aligned_cols=202 Identities=14% Similarity=0.135 Sum_probs=140.5
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 634 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 634 (776)
|+||++||.+++.. .|..++..|++ ||.|+++|+||+|.+........ .....+++.+.+..+++..
T Consensus 29 ~~vv~lHG~~~~~~-------~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~----~~~~~~~~~~~~~~~~~~~- 95 (282)
T 3qvm_A 29 KTVLLAHGFGCDQN-------MWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTK----RYSSLEGYAKDVEEILVAL- 95 (282)
T ss_dssp CEEEEECCTTCCGG-------GGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTT----GGGSHHHHHHHHHHHHHHT-
T ss_pred CeEEEECCCCCCcc-------hHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCcc----ccccHHHHHHHHHHHHHHc-
Confidence 89999999776643 23445778877 99999999999998875421100 1113556666666565543
Q ss_pred CCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc---------------------------cccccc
Q 004067 635 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF---------------------------YTEKYM 687 (776)
Q Consensus 635 id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~---------------------------~~~~~~ 687 (776)
+.++++++||||||.+++.++.++|++++++++.+|.......... +.....
T Consensus 96 -~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (282)
T 3qvm_A 96 -DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVM 174 (282)
T ss_dssp -TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhcc
Confidence 3468999999999999999999999999999999887532211000 000000
Q ss_pred CCCCC--------------Cc-------cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEE
Q 004067 688 GLPSE--------------DP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 746 (776)
Q Consensus 688 ~~~~~--------------~~-------~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 746 (776)
..... .. ......+....+.++++|+|+++|++|..+++..+..+.+.+ .+.+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~ 250 (282)
T 3qvm_A 175 GASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENI----PNSQLE 250 (282)
T ss_dssp CTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHS----SSEEEE
T ss_pred CCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhC----CCCcEE
Confidence 00000 00 000112233456788999999999999999998888887765 567999
Q ss_pred EecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 747 IFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 747 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
++++++|.+ ..+..+++.+.+.+||+++
T Consensus 251 ~~~~~gH~~-~~~~~~~~~~~i~~fl~~~ 278 (282)
T 3qvm_A 251 LIQAEGHCL-HMTDAGLITPLLIHFIQNN 278 (282)
T ss_dssp EEEEESSCH-HHHCHHHHHHHHHHHHHHC
T ss_pred EecCCCCcc-cccCHHHHHHHHHHHHHhc
Confidence 999999987 4456888999999999875
No 171
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.76 E-value=2.2e-18 Score=174.58 Aligned_cols=224 Identities=14% Similarity=0.147 Sum_probs=143.4
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+...+++.+| .+.++...+ +.|+||++||.+++.. .|..++..+.+.||.|+++|+||+|.+.
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~--------~~~~vv~lHG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 66 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESEG--------EGAPLLMIHGNSSSGA-------IFAPQLEGEIGKKWRVIAPDLPGHGKST 66 (279)
T ss_dssp CEEEEEEETTE-EEEEEECCC--------CEEEEEEECCTTCCGG-------GGHHHHHSHHHHHEEEEEECCTTSTTSC
T ss_pred eEEEEEEcCCc-eEEEEecCC--------CCCeEEEECCCCCchh-------HHHHHHhHHHhcCCeEEeecCCCCCCCC
Confidence 45667777665 566554432 3488999999876644 2444566666779999999999999887
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccccc--
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF-- 681 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~-- 681 (776)
....... .....++.+.+..+++.. +.+++.++||||||.+++.++.++|+..+.+++.++..........
T Consensus 67 ~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~ 139 (279)
T 4g9e_A 67 DAIDPDR-----SYSMEGYADAMTEVMQQL--GIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFK 139 (279)
T ss_dssp CCSCHHH-----HSSHHHHHHHHHHHHHHH--TCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBC
T ss_pred CCCCccc-----CCCHHHHHHHHHHHHHHh--CCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhc
Confidence 5321111 113555555555555442 3458999999999999999999999954444444443322110000
Q ss_pred --------------------ccccccCCCCCC--ccc------------------hhcCChhhhhccCCCcEEEEecCCC
Q 004067 682 --------------------YTEKYMGLPSED--PVG------------------YEYSSVMHHVHKMKGKLLLVHGMID 721 (776)
Q Consensus 682 --------------------~~~~~~~~~~~~--~~~------------------~~~~~~~~~~~~i~~P~lii~G~~D 721 (776)
+.......+... ... ....+....+.++++|+|+++|++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 219 (279)
T 4g9e_A 140 SGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDE 219 (279)
T ss_dssp CSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTC
T ss_pred cchhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCC
Confidence 000000000000 000 0012233446778999999999999
Q ss_pred CccChHHHHHHH-HHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 722 ENVHFRHTARLI-NALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 722 ~~v~~~~~~~~~-~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
..+++.....+. +. ..++++++++++||.+ ..+.++++.+.+.+||++.
T Consensus 220 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 269 (279)
T 4g9e_A 220 PFVELDFVSKVKFGN----LWEGKTHVIDNAGHAP-FREAPAEFDAYLARFIRDC 269 (279)
T ss_dssp SSBCHHHHTTCCCSS----BGGGSCEEETTCCSCH-HHHSHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHhhcc----CCCCeEEEECCCCcch-HHhCHHHHHHHHHHHHHHh
Confidence 999988776665 32 2356889999999986 5567889999999999874
No 172
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.76 E-value=6.7e-18 Score=170.34 Aligned_cols=212 Identities=16% Similarity=0.074 Sum_probs=139.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCCCCCchhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
+|..+++.... +.|+||++||.+++.. .|..++..|++ .||.|+++|+||+|.+.....
T Consensus 9 ~g~~l~y~~~g---------~~~~vv~lhG~~~~~~-------~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~---- 68 (272)
T 3fsg_A 9 TRSNISYFSIG---------SGTPIIFLHGLSLDKQ-------STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP---- 68 (272)
T ss_dssp CTTCCEEEEEC---------CSSEEEEECCTTCCHH-------HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS----
T ss_pred cCCeEEEEEcC---------CCCeEEEEeCCCCcHH-------HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC----
Confidence 66667766543 2267899999876643 23334555666 799999999999998865332
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccc-------cc
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY-------TE 684 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~ 684 (776)
...+++.+.+..+++.. .+..++.++||||||.+++.++.++|++++++++.+|........... ..
T Consensus 69 -----~~~~~~~~~~~~~l~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 142 (272)
T 3fsg_A 69 -----STSDNVLETLIEAIEEI-IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEE 142 (272)
T ss_dssp -----CSHHHHHHHHHHHHHHH-HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECS
T ss_pred -----CCHHHHHHHHHHHHHHH-hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhh
Confidence 22344444433333320 134689999999999999999999999999999988764221100000 00
Q ss_pred cccCCCC-------------CCcc----------------------chh-----cCChhhhhccCCCcEEEEecCCCCcc
Q 004067 685 KYMGLPS-------------EDPV----------------------GYE-----YSSVMHHVHKMKGKLLLVHGMIDENV 724 (776)
Q Consensus 685 ~~~~~~~-------------~~~~----------------------~~~-----~~~~~~~~~~i~~P~lii~G~~D~~v 724 (776)
.+..... .... .+. .......+.++++|+|+++|++|..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 222 (272)
T 3fsg_A 143 DINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVV 222 (272)
T ss_dssp CCCCCTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTT
T ss_pred hhhcccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcC
Confidence 0000000 0000 000 00111134678899999999999999
Q ss_pred ChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 725 HFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 725 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
++.....+.+.+ .++++++++++||.+ ..+.++++.+.+.+||++.
T Consensus 223 ~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~ 268 (272)
T 3fsg_A 223 GYQEQLKLINHN----ENGEIVLLNRTGHNL-MIDQREAVGFHFDLFLDEL 268 (272)
T ss_dssp CSHHHHHHHTTC----TTEEEEEESSCCSSH-HHHTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhc----CCCeEEEecCCCCCc-hhcCHHHHHHHHHHHHHHh
Confidence 998887776654 568999999999987 4466889999999999864
No 173
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.2e-17 Score=178.86 Aligned_cols=301 Identities=10% Similarity=0.021 Sum_probs=179.4
Q ss_pred cCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 55 VAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 55 ~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
..+.+++|||||++||-.+.+ ..|. |+..++ .+.. +...+....|+|
T Consensus 16 ~~v~sv~~SpDG~~iASas~D-----~TV~--d~~~~~--~l~g------------------------h~~~v~~V~FsP 62 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPD-----ISIG--QPKYAK--DINC------------------------NSKNLFHVKEFP 62 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSS-----EEEE--EECCCS--CCSS------------------------BGGGTEEEEEEC
T ss_pred ccEEEEEECCCCCEEEEEcCC-----ceee--cccccc--eecC------------------------CCccEEEEEECC
Confidence 446899999999999954432 2344 544443 2222 234788999999
Q ss_pred cCCCceEEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCc
Q 004067 135 TSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNT 213 (776)
Q Consensus 135 ~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~ 213 (776)
|| .++ .|++..++....++......+...+|||||+.||..+. +.+.+|+.++ ....+. ...
T Consensus 63 ---dg------~~~---~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~--- 125 (588)
T 2j04_A 63 ---LE------FEN---KLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKG--- 125 (588)
T ss_dssp ---CC------CCC---TTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSS---
T ss_pred ---CC------Ccc---eEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCC---
Confidence 99 222 33444333221222122345889999999999999886 5799998654 222222 110
Q ss_pred eecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 214 VTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
..... .+..++|||||+.|+..+.+ ..|.+||+.
T Consensus 126 ~~~~~----------sv~svafSPDG~~LAsgs~D------------------------------------GtVkIWd~~ 159 (588)
T 2j04_A 126 NLSSR----------TYHCFEWNPIESSIVVGNED------------------------------------GELQFFSIR 159 (588)
T ss_dssp CSTTT----------CEEEEEECSSSSCEEEEETT------------------------------------SEEEEEECC
T ss_pred ccccc----------cEEEEEEcCCCCEEEEEcCC------------------------------------CEEEEEECC
Confidence 00000 14578999999999987754 458999999
Q ss_pred CCce--------EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE----EEEE-eccC
Q 004067 294 GGPV--------SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK----VILV-EELD 360 (776)
Q Consensus 294 ~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~----~l~~-~~~~ 360 (776)
+++. ..+... ..++...+..++||||| ++..+ .+..+++||++++... .+.. +...
T Consensus 160 ~~~l~~~~~i~l~ti~~~-----~~gh~~~V~sVawSPdg--Laass----~D~tVrlWd~~~~~~~~~~~tL~~~h~~~ 228 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLS-----DAGSKDWVTHIVWYEDV--LVAAL----SNNSVFSMTVSASSHQPVSRMIQNASRRK 228 (588)
T ss_dssp CCTTTCCCCEEEEEEECS-----CTTCCCCEEEEEEETTE--EEEEE----TTCCEEEECCCSSSSCCCEEEEECCCSSC
T ss_pred CCccccccceeeeeeecc-----cccccccEEEEEEcCCc--EEEEe----CCCeEEEEECCCCccccceeeecccccCc
Confidence 9863 333221 12355689999999999 44443 3566999999887742 2321 2222
Q ss_pred ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccc-cCCeEEEEEEee--cCCCcEEEEEEccCCC
Q 004067 361 SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT-EGDWMVEQIVGV--NEASGQVYFTGTLDGP 437 (776)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt-~~~~~~~~~~~~--s~dg~~i~~~~~~~~~ 437 (776)
.+. ++|. ++.++++. ++ .|.+|+..+++...+. .+...+..+. + ++|++. +..+..++
T Consensus 229 V~s------------vaFs-g~~LASa~-~~--tIkLWd~~~~~~~~~~~gh~~~V~~va-~~~s~d~~~-La~a~edG- 289 (588)
T 2j04_A 229 ITD------------LKIV-DYKVVLTC-PG--YVHKIDLKNYSISSLKTGSLENFHIIP-LNHEKESTI-LLMSNKTS- 289 (588)
T ss_dssp CCC------------EEEE-TTEEEEEC-SS--EEEEEETTTTEEEEEECSCCSCCCEEE-ETTCSSCEE-EEECSSCE-
T ss_pred EEE------------EEEE-CCEEEEEe-CC--eEEEEECCCCeEEEEEcCCCceEEEEE-eeeCCCCCE-EEEEcCCC-
Confidence 221 1333 34555543 34 9999999988875544 4444455554 8 999864 44444443
Q ss_pred ceeeEEEE-----EeCCCCCCcc-------------ccceeecCCCCeEEEEEcCCcCEEEEEeeC
Q 004067 438 LESHLYCA-----KLYPDWNHTL-------------EAPVKLTNGKGKHVAVLDHNMRNFVDFHDS 485 (776)
Q Consensus 438 ~~~~l~~~-----~~~~~g~~~~-------------~~~~~l~~~~~~~~~~~spdg~~l~~~~~~ 485 (776)
. +||.. .. ++.--. .+...+.....+++++|||||+.+|..+.-
T Consensus 290 -~-klw~~d~~~~sp--d~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 290 -Y-KVLLEDELHVTA--DNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDM 351 (588)
T ss_dssp -E-EEEESSSEEEEC--CCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEE
T ss_pred -C-EEEeeccEEECC--CceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEec
Confidence 2 56653 32 221000 011122221136788999999999887653
No 174
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.75 E-value=4.1e-18 Score=168.91 Aligned_cols=207 Identities=17% Similarity=0.175 Sum_probs=136.6
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhc
Q 004067 534 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHN 613 (776)
Q Consensus 534 g~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~ 613 (776)
|.++++..+.+.+ +.|+||++||.+++.. .| . ....|+ .||.|+++|+||+|.+...
T Consensus 2 g~~l~y~~~g~~~------~~~~vv~~hG~~~~~~---~~----~-~~~~l~-~g~~v~~~d~~g~g~s~~~-------- 58 (245)
T 3e0x_A 2 NAMLHYVHVGNKK------SPNTLLFVHGSGCNLK---IF----G-ELEKYL-EDYNCILLDLKGHGESKGQ-------- 58 (245)
T ss_dssp CCCCCEEEEECTT------CSCEEEEECCTTCCGG---GG----T-TGGGGC-TTSEEEEECCTTSTTCCSC--------
T ss_pred CceeEEEecCCCC------CCCEEEEEeCCcccHH---HH----H-HHHHHH-hCCEEEEecCCCCCCCCCC--------
Confidence 3445666665432 4589999999877654 23 2 234454 7999999999999988622
Q ss_pred cCCccHHHHHHHHHHHH----HcCCCCCCcEEEEeechHHHHHHHHHhh-CCCceEEEEEcCCCCCcccccccccc----
Q 004067 614 CGRIDAEDQLTGAEWLI----KQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDGYDTFYTE---- 684 (776)
Q Consensus 614 ~~~~~~~D~~~~i~~l~----~~~~id~~~i~l~G~S~GG~~a~~~a~~-~~~~~~~~v~~~~~~~~~~~~~~~~~---- 684 (776)
.....+++.+.+..+. ....+. +++++||||||.+++.++.+ +|+ ++++++.+|..........+..
T Consensus 59 -~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~ 134 (245)
T 3e0x_A 59 -CPSTVYGYIDNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYH 134 (245)
T ss_dssp -CCSSHHHHHHHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHT
T ss_pred -CCcCHHHHHHHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHH
Confidence 1223555555555555 112223 99999999999999999999 999 9999999987654211100000
Q ss_pred ---------------------cccCCCCCCcc-------chhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHH
Q 004067 685 ---------------------KYMGLPSEDPV-------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINAL 736 (776)
Q Consensus 685 ---------------------~~~~~~~~~~~-------~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l 736 (776)
.+......... .....+....+.++++|+|+++|++|..+++..+..+.+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 214 (245)
T 3e0x_A 135 NQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV 214 (245)
T ss_dssp TCCCHHHHHHHHTCSCSHHHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS
T ss_pred HHHHhhcCcccccccchHHHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Confidence 00000000000 01122334557788999999999999999999888887765
Q ss_pred HHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 004067 737 VAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 772 (776)
Q Consensus 737 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 772 (776)
.+++++++++++|.+ ..+..+++.+.+.+||
T Consensus 215 ----~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 215 ----ENSELKIFETGKHFL-LVVNAKGVAEEIKNFI 245 (245)
T ss_dssp ----SSEEEEEESSCGGGH-HHHTHHHHHHHHHTTC
T ss_pred ----CCceEEEeCCCCcce-EEecHHHHHHHHHhhC
Confidence 468999999999986 3445666666666653
No 175
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.75 E-value=2.2e-18 Score=172.39 Aligned_cols=198 Identities=11% Similarity=0.039 Sum_probs=128.7
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 633 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 633 (776)
.|.||++||.+++.. .|..++..|++. |.|+++|+||+|.|.... ...+.++.+.+..+++..
T Consensus 16 ~~~vvllHG~~~~~~-------~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~---------~~~~~~~a~dl~~~l~~l 78 (255)
T 3bf7_A 16 NSPIVLVHGLFGSLD-------NLGVLARDLVND-HNIIQVDVRNHGLSPREP---------VMNYPAMAQDLVDTLDAL 78 (255)
T ss_dssp CCCEEEECCTTCCTT-------TTHHHHHHHTTT-SCEEEECCTTSTTSCCCS---------CCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCcccHh-------HHHHHHHHHHhh-CcEEEecCCCCCCCCCCC---------CcCHHHHHHHHHHHHHHc
Confidence 478999999876543 345556777765 999999999999886421 112333433333333321
Q ss_pred CCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCC--CCccc-cccc-----------cc-----ccccCCCCCCc
Q 004067 634 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV--TSWDG-YDTF-----------YT-----EKYMGLPSEDP 694 (776)
Q Consensus 634 ~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~--~~~~~-~~~~-----------~~-----~~~~~~~~~~~ 694 (776)
..+++.|+||||||.+++.+|.++|++++++|+.++. ..... .... +. ...+.......
T Consensus 79 --~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T 3bf7_A 79 --QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEE 156 (255)
T ss_dssp --TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCH
T ss_pred --CCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchh
Confidence 3358999999999999999999999999999886432 11000 0000 00 00000000000
Q ss_pred ---cc---------hhcC------C--hh---hhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCC
Q 004067 695 ---VG---------YEYS------S--VM---HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 751 (776)
Q Consensus 695 ---~~---------~~~~------~--~~---~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 751 (776)
.. +... . .+ ..+.++++|+|+++|++|..+++.....+.+.+ .+.++++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~ 232 (255)
T 3bf7_A 157 GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF----PQARAHVIAGA 232 (255)
T ss_dssp HHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC----TTEEECCBTTC
T ss_pred HHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC----CCCeEEEeCCC
Confidence 00 0000 0 00 124578899999999999999988877776654 56899999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 752 RHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 752 ~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
||.+ ..+.++.+.+.+.+||.+|
T Consensus 233 gH~~-~~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 233 GHWV-HAEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp CSCH-HHHCHHHHHHHHHHHHHTC
T ss_pred CCcc-ccCCHHHHHHHHHHHHhcC
Confidence 9986 5567889999999999875
No 176
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.75 E-value=2.1e-17 Score=172.06 Aligned_cols=230 Identities=14% Similarity=0.121 Sum_probs=141.4
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
+.+...+.. +|..+++..+. + .|+||++||.+++.. .|...+..|++.||.|+++|+||+|.|
T Consensus 10 ~~~~~~~~~-~g~~l~y~~~G--~-------g~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~via~Dl~G~G~S 72 (328)
T 2cjp_A 10 KIEHKMVAV-NGLNMHLAELG--E-------GPTILFIHGFPELWY-------SWRHQMVYLAERGYRAVAPDLRGYGDT 72 (328)
T ss_dssp CCEEEEEEE-TTEEEEEEEEC--S-------SSEEEEECCTTCCGG-------GGHHHHHHHHTTTCEEEEECCTTSTTC
T ss_pred hhheeEecC-CCcEEEEEEcC--C-------CCEEEEECCCCCchH-------HHHHHHHHHHHCCcEEEEECCCCCCCC
Confidence 344444444 78888887664 1 268999999876543 345567788889999999999999998
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCC-------c
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS-------W 675 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~-------~ 675 (776)
....... ...+.++++.+.+..+++.-..+.+++.|+||||||.+++.+|.++|++++++|+.++... +
T Consensus 73 ~~~~~~~----~~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~ 148 (328)
T 2cjp_A 73 TGAPLND----PSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNV 148 (328)
T ss_dssp BCCCTTC----GGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCH
T ss_pred CCcCcCC----cccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCCh
Confidence 6430000 0011233333333333332110246899999999999999999999999999998764321 0
Q ss_pred c-cccc---------cc------------------cccccC----C----CCC-----------------Cccc---h--
Q 004067 676 D-GYDT---------FY------------------TEKYMG----L----PSE-----------------DPVG---Y-- 697 (776)
Q Consensus 676 ~-~~~~---------~~------------------~~~~~~----~----~~~-----------------~~~~---~-- 697 (776)
. .... .+ ...+.. . +.. .... +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (328)
T 2cjp_A 149 VEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYAN 228 (328)
T ss_dssp HHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHH
T ss_pred HHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHH
Confidence 0 0000 00 000000 0 000 0000 0
Q ss_pred --hc------------CC-hh-----hhhccCCCcEEEEecCCCCccChHHHHHHH--HHHHHCCCCe-EEEEecCCCCC
Q 004067 698 --EY------------SS-VM-----HHVHKMKGKLLLVHGMIDENVHFRHTARLI--NALVAARKPY-EILIFPDERHM 754 (776)
Q Consensus 698 --~~------------~~-~~-----~~~~~i~~P~lii~G~~D~~v~~~~~~~~~--~~l~~~~~~~-~~~~~~~~~H~ 754 (776)
.. .. .. ..+.++++|+|+++|++|..+++..+.+.. +.+.+.-.+. ++++++++||.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~ 308 (328)
T 2cjp_A 229 KFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHF 308 (328)
T ss_dssp HHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSC
T ss_pred HhcccCCcchHHHHHhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCC
Confidence 00 00 00 024577899999999999999875433332 3343333566 78999999998
Q ss_pred CCCCCcHHHHHHHHHHHHHH
Q 004067 755 PRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 755 ~~~~~~~~~~~~~~~~fl~~ 774 (776)
+ ..+.++++.+.+.+||.+
T Consensus 309 ~-~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 309 V-SQERPHEISKHIYDFIQK 327 (328)
T ss_dssp H-HHHSHHHHHHHHHHHHTT
T ss_pred c-chhCHHHHHHHHHHHHHh
Confidence 7 556789999999999964
No 177
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.75 E-value=5.7e-18 Score=180.35 Aligned_cols=220 Identities=12% Similarity=0.065 Sum_probs=139.6
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccc-----------cccccccchhhhHHHHhCCcEE
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLV-----------CDSWINTVDMRAQYLRSKGILV 591 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~-----------~~~~~~~~~~~~~~l~~~G~~v 591 (776)
..+.+.+++.+|..++++++.|++. .++.|+||++||+++.... .+.|......+++.|+++||+|
T Consensus 91 ~~e~v~~~~~~g~~l~~~l~~P~~~---~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~V 167 (398)
T 3nuz_A 91 RLEKWEFYPLPKCVSTFLVLIPDNI---NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIA 167 (398)
T ss_dssp EEEEEEECCSTTBCEEEEEEEESSC---CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEE
T ss_pred EEEEEEEEcCCCcEEEEEEEeCCCC---CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEE
Confidence 4677889988999999999999873 2578999999997664321 0111111114688999999999
Q ss_pred EEECCCCCCCCchhhhh------------h----hhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHH
Q 004067 592 WKLDNRGTARRGLKFEA------------S----IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 655 (776)
Q Consensus 592 ~~~d~rg~g~~~~~~~~------------~----~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~ 655 (776)
+++|+||+|.++..... . ....+......|+.++++++.++..+|.+||+|+||||||++++.+
T Consensus 168 l~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~ 247 (398)
T 3nuz_A 168 VAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVL 247 (398)
T ss_dssp EEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHH
Confidence 99999999987643210 0 0001111235799999999999888999999999999999999998
Q ss_pred HhhCCCceEEEEEcCCCCCcccccccccc-cccC---CCC----CCccchhcCChhhhhccC-CCcEEEEecCCCCccCh
Q 004067 656 LARFPDVFQCAVSGAPVTSWDGYDTFYTE-KYMG---LPS----EDPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHF 726 (776)
Q Consensus 656 a~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~---~~~----~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D~~v~~ 726 (776)
++..+ +++++|+.+++..+......+.. ...+ .+. .....+...+....+..+ ..|+|++||..|..+
T Consensus 248 aa~~~-~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ap~PlLii~G~~D~~v-- 324 (398)
T 3nuz_A 248 GTLDT-SIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAALAPRPIILTEGGLDRDL-- 324 (398)
T ss_dssp HHHCT-TCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTHHHHCCHHHHHHHTTTSCEEECSCBCHHHH--
T ss_pred HhcCC-cEEEEEEecccccchhhhhhhccccccccccCCccHHHhcchHhhhCCHHHHHHhhCCCcEEEeeCCchHHH--
Confidence 88754 57888887665554322111110 0000 000 000111222333333332 359999999999554
Q ss_pred HHHHHHHHHHHHCCCCeEEEEec
Q 004067 727 RHTARLINALVAARKPYEILIFP 749 (776)
Q Consensus 727 ~~~~~~~~~l~~~~~~~~~~~~~ 749 (776)
....++++.+. ...++++++||
T Consensus 325 ~~~~~~y~~~g-~~~~~~~~~~p 346 (398)
T 3nuz_A 325 DLVRKAYAIVG-TPDNVKIYHYK 346 (398)
T ss_dssp HHHHHHHHHHT-CTTSEEECCCG
T ss_pred HHHHHHHHHcC-CCcceEEEEeC
Confidence 44555555442 22467777666
No 178
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.75 E-value=6.9e-18 Score=172.97 Aligned_cols=219 Identities=12% Similarity=0.041 Sum_probs=148.2
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCch
Q 004067 525 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 604 (776)
Q Consensus 525 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~ 604 (776)
+...+.. +|..+++..+.+++ .|+||++||.+++.. .|..++..|+ .||.|+++|+||+|.+..
T Consensus 11 ~~~~~~~-~g~~l~~~~~g~~~-------~~~vl~lHG~~~~~~-------~~~~~~~~l~-~~~~v~~~d~~G~G~s~~ 74 (299)
T 3g9x_A 11 DPHYVEV-LGERMHYVDVGPRD-------GTPVLFLHGNPTSSY-------LWRNIIPHVA-PSHRCIAPDLIGMGKSDK 74 (299)
T ss_dssp CCEEEEE-TTEEEEEEEESCSS-------SCCEEEECCTTCCGG-------GGTTTHHHHT-TTSCEEEECCTTSTTSCC
T ss_pred ceeeeee-CCeEEEEEecCCCC-------CCEEEEECCCCccHH-------HHHHHHHHHc-cCCEEEeeCCCCCCCCCC
Confidence 3344444 78889988886532 368999999877654 2334566675 599999999999998864
Q ss_pred hhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc---ccccc
Q 004067 605 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---GYDTF 681 (776)
Q Consensus 605 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~---~~~~~ 681 (776)
... ....+++.+.+..+++.. +.+++.++||||||.+++.++.++|++++++|+.++..... .+...
T Consensus 75 ~~~--------~~~~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 144 (299)
T 3g9x_A 75 PDL--------DYFFDDHVRYLDAFIEAL--GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEF 144 (299)
T ss_dssp CCC--------CCCHHHHHHHHHHHHHHT--TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGG
T ss_pred CCC--------cccHHHHHHHHHHHHHHh--CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchH
Confidence 321 234666766666666653 44689999999999999999999999999999887543322 11000
Q ss_pred c-----------------------ccccc---CCCCCCc---cc-----------------hhcC--------------C
Q 004067 682 Y-----------------------TEKYM---GLPSEDP---VG-----------------YEYS--------------S 701 (776)
Q Consensus 682 ~-----------------------~~~~~---~~~~~~~---~~-----------------~~~~--------------~ 701 (776)
. ...+. ....... .. +... +
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3g9x_A 145 ARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEA 224 (299)
T ss_dssp GHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhh
Confidence 0 00000 0000000 00 0000 1
Q ss_pred hhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 702 VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 702 ~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
....+.++++|+|+++|++|..+++.....+.+.+ .++++++++++||.+ ..+.++++.+.+.+++.+
T Consensus 225 ~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 225 YMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL----PNCKTVDIGPGLHYL-QEDNPDLIGSEIARWLPA 292 (299)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS----TTEEEEEEEEESSCH-HHHCHHHHHHHHHHHSGG
T ss_pred hhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhC----CCCeEEEeCCCCCcc-hhcCHHHHHHHHHHHHhh
Confidence 12235678899999999999999999888887765 568899999999986 556788888888887654
No 179
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.75 E-value=4.5e-17 Score=168.32 Aligned_cols=220 Identities=15% Similarity=0.134 Sum_probs=137.9
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+...+...+|..+++..+.+.+ .|.||++||++++.. + ......+...+|.|+++|+||+|.|.
T Consensus 11 ~~~~~~~~~~g~~l~y~~~G~~~-------g~pvvllHG~~~~~~----~----~~~~~~~~~~~~~vi~~D~~G~G~S~ 75 (313)
T 1azw_A 11 YQQGSLKVDDRHTLYFEQCGNPH-------GKPVVMLHGGPGGGC----N----DKMRRFHDPAKYRIVLFDQRGSGRST 75 (313)
T ss_dssp SEEEEEECSSSCEEEEEEEECTT-------SEEEEEECSTTTTCC----C----GGGGGGSCTTTEEEEEECCTTSTTSB
T ss_pred cccceEEcCCCCEEEEEecCCCC-------CCeEEEECCCCCccc----c----HHHHHhcCcCcceEEEECCCCCcCCC
Confidence 45566777788888888775422 256899999765432 1 11123344579999999999999986
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc------
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG------ 677 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~------ 677 (776)
... ........++.+.+..+++.. ..+++.|+||||||.+++.+|.++|++++++|+.++......
T Consensus 76 ~~~------~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 147 (313)
T 1azw_A 76 PHA------DLVDNTTWDLVADIERLRTHL--GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFY 147 (313)
T ss_dssp STT------CCTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHH
T ss_pred CCc------ccccccHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHH
Confidence 321 011233566666666666553 345899999999999999999999999999998876532100
Q ss_pred -------cccc-------------------ccccccCCC---------------------CCCc---------c------
Q 004067 678 -------YDTF-------------------YTEKYMGLP---------------------SEDP---------V------ 695 (776)
Q Consensus 678 -------~~~~-------------------~~~~~~~~~---------------------~~~~---------~------ 695 (776)
.... +........ .... .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (313)
T 1azw_A 148 QEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFA 227 (313)
T ss_dssp TSSHHHHCHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHH
T ss_pred hhhhhhhchHHHHHHhhccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHH
Confidence 0000 000000000 0000 0
Q ss_pred ----------chh--cCChhhhhccCC-CcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHH
Q 004067 696 ----------GYE--YSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRI 762 (776)
Q Consensus 696 ----------~~~--~~~~~~~~~~i~-~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~ 762 (776)
.+. .......+.+++ +|+|+++|++|.++++..+..+.+.+ .+.++++++++||....+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~gH~~~~~---- 299 (313)
T 1azw_A 228 RIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW----PKAQLQISPASGHSAFEP---- 299 (313)
T ss_dssp HHHHHHHHTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC----TTSEEEEETTCCSSTTSH----
T ss_pred HhhhhhhcccccccccchhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhC----CCcEEEEeCCCCCCcCCC----
Confidence 000 001123345675 99999999999999998888877765 457899999999976322
Q ss_pred HHHHHHHHHHHH
Q 004067 763 YMEERIWEFIER 774 (776)
Q Consensus 763 ~~~~~~~~fl~~ 774 (776)
+..+.+.+++.+
T Consensus 300 ~~~~~~~~~i~~ 311 (313)
T 1azw_A 300 ENVDALVRATDG 311 (313)
T ss_dssp HHHHHHHHHHHH
T ss_pred ccHHHHHHHHhh
Confidence 334455555443
No 180
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.75 E-value=1.9e-17 Score=169.00 Aligned_cols=214 Identities=16% Similarity=0.108 Sum_probs=141.2
Q ss_pred CCC-cEEEEEEEcCCCCCCCCCCceEEEEEcCCC---CcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhh
Q 004067 532 NDG-TVLYGALYKPDESRYGPPPYKTLISVYGGP---CVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 607 (776)
Q Consensus 532 ~dg-~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~---~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~ 607 (776)
.+| ..+++....+ ++.|.||++||.. ++.. . |...+..|++. |.|+++|+||+|.|.....
T Consensus 20 ~~g~~~l~y~~~G~-------g~~~~vvllHG~~pg~~~~~---~----w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~ 84 (291)
T 2wue_A 20 VDGPLKLHYHEAGV-------GNDQTVVLLHGGGPGAASWT---N----FSRNIAVLARH-FHVLAVDQPGYGHSDKRAE 84 (291)
T ss_dssp SSSEEEEEEEEECT-------TCSSEEEEECCCCTTCCHHH---H----TTTTHHHHTTT-SEEEEECCTTSTTSCCCSC
T ss_pred eCCcEEEEEEecCC-------CCCCcEEEECCCCCccchHH---H----HHHHHHHHHhc-CEEEEECCCCCCCCCCCCC
Confidence 478 8888877642 2236899999974 3321 2 33446677665 9999999999998864321
Q ss_pred hhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc---------cc
Q 004067 608 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---------GY 678 (776)
Q Consensus 608 ~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~---------~~ 678 (776)
..+.++++.+.+..+++.- +.+++.|+||||||.+++.+|.++|++++++|+.++..... ..
T Consensus 85 -------~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 155 (291)
T 2wue_A 85 -------HGQFNRYAAMALKGLFDQL--GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGV 155 (291)
T ss_dssp -------CSSHHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHH
T ss_pred -------CCcCHHHHHHHHHHHHHHh--CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhh
Confidence 0123455555555444432 34689999999999999999999999999999988754210 00
Q ss_pred c---cc-----------ccccccCCCCC--------------Ccc----chhc----CC-----hh--hhhccCCCcEEE
Q 004067 679 D---TF-----------YTEKYMGLPSE--------------DPV----GYEY----SS-----VM--HHVHKMKGKLLL 715 (776)
Q Consensus 679 ~---~~-----------~~~~~~~~~~~--------------~~~----~~~~----~~-----~~--~~~~~i~~P~li 715 (776)
. .. +.......+.. ... .+.. .+ .. ..+.++++|+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv 235 (291)
T 2wue_A 156 KRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLL 235 (291)
T ss_dssp HHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEE
T ss_pred HHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEE
Confidence 0 00 00000000000 000 0000 00 11 456778899999
Q ss_pred EecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 716 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 716 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
++|++|..+|+..+..+.+.+ .+.++++++++||.. ..+.++++.+.+.+||.+
T Consensus 236 i~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 236 IWGREDRVNPLDGALVALKTI----PRAQLHVFGQCGHWV-QVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp EEETTCSSSCGGGGHHHHHHS----TTEEEEEESSCCSCH-HHHTHHHHHHHHHHHTTC
T ss_pred EecCCCCCCCHHHHHHHHHHC----CCCeEEEeCCCCCCh-hhhCHHHHHHHHHHHHhc
Confidence 999999999998888776654 467999999999976 456688899999999864
No 181
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.75 E-value=1.2e-17 Score=170.79 Aligned_cols=212 Identities=14% Similarity=0.138 Sum_probs=144.8
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 612 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~ 612 (776)
++..+++.... +.|+||++||.+++.. .|.. ..+..+++.||.|+++|+||+|.+...
T Consensus 31 ~~~~l~y~~~g---------~~~~vv~lHG~~~~~~---~~~~---~~~~~l~~~g~~vi~~D~~G~G~s~~~------- 88 (293)
T 3hss_A 31 RVINLAYDDNG---------TGDPVVFIAGRGGAGR---TWHP---HQVPAFLAAGYRCITFDNRGIGATENA------- 88 (293)
T ss_dssp CEEEEEEEEEC---------SSEEEEEECCTTCCGG---GGTT---TTHHHHHHTTEEEEEECCTTSGGGTTC-------
T ss_pred ccceEEEEEcC---------CCCEEEEECCCCCchh---hcch---hhhhhHhhcCCeEEEEccCCCCCCCCc-------
Confidence 45556655432 3378999999876654 2321 346778889999999999999866432
Q ss_pred ccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccc----------
Q 004067 613 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY---------- 682 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~---------- 682 (776)
.....+++.+.+..+++.. +.+++.++|||+||.+++.+|.++|++++++++.+|..........+
T Consensus 89 --~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (293)
T 3hss_A 89 --EGFTTQTMVADTAALIETL--DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDS 164 (293)
T ss_dssp --CSCCHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHH
T ss_pred --ccCCHHHHHHHHHHHHHhc--CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhh
Confidence 1123555555555554432 34689999999999999999999999999999998875432110000
Q ss_pred ------------------ccc--------------ccCCCCCCc-------cchhcCChhhhhccCCCcEEEEecCCCCc
Q 004067 683 ------------------TEK--------------YMGLPSEDP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDEN 723 (776)
Q Consensus 683 ------------------~~~--------------~~~~~~~~~-------~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 723 (776)
... ....+.... ......+....+.++++|+|+++|++|..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~ 244 (293)
T 3hss_A 165 GVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVV 244 (293)
T ss_dssp TCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSS
T ss_pred cccchhhHHHHHHHhhhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCC
Confidence 000 000000000 00112234456778899999999999999
Q ss_pred cChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 724 VHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 724 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+++..+..+.+.+ .++++++++++||.+ ..+.++++.+.+.+||++.
T Consensus 245 ~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 245 TPPYLGREVADAL----PNGRYLQIPDAGHLG-FFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp SCHHHHHHHHHHS----TTEEEEEETTCCTTH-HHHSHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHC----CCceEEEeCCCcchH-hhhCHHHHHHHHHHHHHhc
Confidence 9998888887765 567999999999986 4567788999999999763
No 182
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.75 E-value=1.4e-16 Score=160.85 Aligned_cols=221 Identities=14% Similarity=0.092 Sum_probs=141.6
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhh
Q 004067 528 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 607 (776)
Q Consensus 528 ~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~ 607 (776)
.++..+|.++ .+|.|.. .+.|+||++|||+....-...| ....+..+++.||.|+++|||+.+.. .+.
T Consensus 8 ~~~~~~~~~~--~~y~p~~-----~~~p~iv~~HGGg~~~g~~~~~---~~~~~~~l~~~g~~Vi~vdYrlaPe~--~~p 75 (274)
T 2qru_A 8 NQTLANGATV--TIYPTTT-----EPTNYVVYLHGGGMIYGTKSDL---PEELKELFTSNGYTVLALDYLLAPNT--KID 75 (274)
T ss_dssp EEECTTSCEE--EEECCSS-----SSCEEEEEECCSTTTSCCGGGC---CHHHHHHHHTTTEEEEEECCCCTTTS--CHH
T ss_pred cccccCCeeE--EEEcCCC-----CCCcEEEEEeCccccCCChhhc---hHHHHHHHHHCCCEEEEeCCCCCCCC--CCc
Confidence 3444566544 5677753 3569999999987433211122 12346678889999999999976543 121
Q ss_pred hhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHh---hCCCceEEEEEcCCCCCccccccc---
Q 004067 608 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA---RFPDVFQCAVSGAPVTSWDGYDTF--- 681 (776)
Q Consensus 608 ~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~---~~~~~~~~~v~~~~~~~~~~~~~~--- 681 (776)
..++|+.++++++.++.. +.++|+|+|+|+||.+|+.++. ..+..++++++.+|..+.......
T Consensus 76 ---------~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~ 145 (274)
T 2qru_A 76 ---------HILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKL 145 (274)
T ss_dssp ---------HHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCS
T ss_pred ---------HHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhh
Confidence 127899999999987642 2679999999999999999987 356678888888776652110000
Q ss_pred --------ccccccC-CC-----CCCc-c---------chh------------cCCh-hhhhccCCCcEEEEecCCCCcc
Q 004067 682 --------YTEKYMG-LP-----SEDP-V---------GYE------------YSSV-MHHVHKMKGKLLLVHGMIDENV 724 (776)
Q Consensus 682 --------~~~~~~~-~~-----~~~~-~---------~~~------------~~~~-~~~~~~i~~P~lii~G~~D~~v 724 (776)
....... .+ .... . .+. .... ...+.++ +|+||++|+.|..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~ 224 (274)
T 2qru_A 146 LKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEV 224 (274)
T ss_dssp CSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSS
T ss_pred ccccccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCc
Confidence 0000000 00 0000 0 000 0000 0134556 79999999999999
Q ss_pred ChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCC---CcHHHHHHHHHHHHHHh
Q 004067 725 HFRHTARLINALVAARKPYEILIFPDERHMPRRH---RDRIYMEERIWEFIERT 775 (776)
Q Consensus 725 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~~fl~~~ 775 (776)
+...+.++.+++ ++++++++++++|.+... ....++.+.+.+||+++
T Consensus 225 ~~~~~~~l~~~~----~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 225 PFRYSKKIGRTI----PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp CTHHHHHHHHHS----TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHhC----CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 887777776654 567999999999997321 22346688899999764
No 183
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.75 E-value=2.7e-17 Score=168.45 Aligned_cols=213 Identities=13% Similarity=0.045 Sum_probs=141.0
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCC---CcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGP---CVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 608 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~---~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~ 608 (776)
.+|.++++.... ..|.||++||.+ ++.. .|...+..|++. |.|+++|+||+|.|. ...
T Consensus 23 ~~g~~l~y~~~g---------~g~~vvllHG~~~~~~~~~-------~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~- 83 (296)
T 1j1i_A 23 AGGVETRYLEAG---------KGQPVILIHGGGAGAESEG-------NWRNVIPILARH-YRVIAMDMLGFGKTA-KPD- 83 (296)
T ss_dssp ETTEEEEEEEEC---------CSSEEEEECCCSTTCCHHH-------HHTTTHHHHTTT-SEEEEECCTTSTTSC-CCS-
T ss_pred ECCEEEEEEecC---------CCCeEEEECCCCCCcchHH-------HHHHHHHHHhhc-CEEEEECCCCCCCCC-CCC-
Confidence 378888877543 125789999964 2221 233446677665 999999999999886 211
Q ss_pred hhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc----ccc---
Q 004067 609 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY----DTF--- 681 (776)
Q Consensus 609 ~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~----~~~--- 681 (776)
.....+++.+.+..+++...+ .+++.|+||||||.+++.+|.++|++++++|+.+|....... ...
T Consensus 84 ------~~~~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 156 (296)
T 1j1i_A 84 ------IEYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINY 156 (296)
T ss_dssp ------SCCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------C
T ss_pred ------CCCCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcc
Confidence 112355555555555544322 168999999999999999999999999999998875421100 000
Q ss_pred ---------ccccccCCCCCC-cc----------------chh-----------cCChhhhhccCCCcEEEEecCCCCcc
Q 004067 682 ---------YTEKYMGLPSED-PV----------------GYE-----------YSSVMHHVHKMKGKLLLVHGMIDENV 724 (776)
Q Consensus 682 ---------~~~~~~~~~~~~-~~----------------~~~-----------~~~~~~~~~~i~~P~lii~G~~D~~v 724 (776)
+...+...+... .. .+. .......+.++++|+|+++|++|..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~ 236 (296)
T 1j1i_A 157 DFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVV 236 (296)
T ss_dssp CSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred cCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCccc
Confidence 000001111000 00 000 00122346788899999999999999
Q ss_pred ChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 725 HFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 725 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
|+..+..+.+.+ .+.++++++++||.+ ..+.++++.+.+.+||.+.
T Consensus 237 ~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 282 (296)
T 1j1i_A 237 PVETAYKFLDLI----DDSWGYIIPHCGHWA-MIEHPEDFANATLSFLSLR 282 (296)
T ss_dssp CHHHHHHHHHHC----TTEEEEEESSCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHC----CCCEEEEECCCCCCc-hhcCHHHHHHHHHHHHhcc
Confidence 998888777664 467999999999986 4567889999999999875
No 184
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.75 E-value=1.3e-15 Score=165.34 Aligned_cols=291 Identities=12% Similarity=0.056 Sum_probs=189.6
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++||| ++.+++....+ ..|++||+++++..+..... . ...+...+..+.|+|
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~-------------~-----~~~~~~~v~~~~~~~-- 179 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLED----EGMDVLDINSGQTVRLSPPE-------------K-----YKKKLGFVETISIPE-- 179 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTS----SSEEEEETTTCCEEEECCCH-------------H-----HHTTCCEEEEEEEGG--
T ss_pred ceEEEEeC-CCeEEEEeCCC----CeEEEEECCCCeEeeecCcc-------------c-----ccccCCceeEEEEcC--
Confidence 46889999 55566665433 36999999998876544210 0 011223577889999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE--CCcEEEEecCCCceeEEeeCCCCCc
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR--DCELHVLNLLINEQRQLTHGANGNT 213 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~~g~~~~lt~~~~~~~ 213 (776)
||+.++.. .++.|++||+.+++....+... ...+..+.|+|||+.+++.. ++.|+++|+.+++..........
T Consensus 180 -~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-- 255 (433)
T 3bws_A 180 -HNELWVSQMQANAVHVFDLKTLAYKATVDLT-GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL-- 255 (433)
T ss_dssp -GTEEEEEEGGGTEEEEEETTTCCEEEEEECS-SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE--
T ss_pred -CCEEEEEECCCCEEEEEECCCceEEEEEcCC-CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC--
Confidence 99877766 5688999999988776344322 23477899999999987776 35799999998876544332211
Q ss_pred eecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 214 VTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
...++|+|||+.|+.......... .....|++||+.
T Consensus 256 ----------------~~~~~~~~~g~~l~~~~~~~~~~~----------------------------~~dg~i~~~d~~ 291 (433)
T 3bws_A 256 ----------------PRGLLLSKDGKELYIAQFSASNQE----------------------------SGGGRLGIYSMD 291 (433)
T ss_dssp ----------------EEEEEECTTSSEEEEEEEESCTTC----------------------------SCCEEEEEEETT
T ss_pred ----------------ceEEEEcCCCCEEEEEECCCCccc----------------------------cCCCeEEEEECC
Confidence 347889999999988765432110 012578999999
Q ss_pred CCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCC
Q 004067 294 GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLD 373 (776)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~ 373 (776)
+++..... ........++|+|||+.+++... .+..|++||+++++............ .-.|+|
T Consensus 292 ~~~~~~~~---------~~~~~~~~~~~~~~g~~l~~~~~---~~~~v~v~d~~~~~~~~~~~~~~~~~---~~~~s~-- 354 (433)
T 3bws_A 292 KEKLIDTI---------GPPGNKRHIVSGNTENKIYVSDM---CCSKIEVYDLKEKKVQKSIPVFDKPN---TIALSP-- 354 (433)
T ss_dssp TTEEEEEE---------EEEECEEEEEECSSTTEEEEEET---TTTEEEEEETTTTEEEEEEECSSSEE---EEEECT--
T ss_pred CCcEEeec---------cCCCCcceEEECCCCCEEEEEec---CCCEEEEEECCCCcEEEEecCCCCCC---eEEEcC--
Confidence 88765542 22335678999999987766543 34469999999887665544322211 111222
Q ss_pred CCccccCCeEEEEe-ccCCc------------eEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCcee
Q 004067 374 KGVTKYSGGFIWAS-EKTGF------------RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 440 (776)
Q Consensus 374 ~~~~~~~~~~~~~s-~~~g~------------~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~ 440 (776)
++..++++ ...+. ..|++||+.+++..........+..+ .|+|||+.|++....++. +
T Consensus 355 ------dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~d~~--i 425 (433)
T 3bws_A 355 ------DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGL-DVSPDNRYLVISDFLDHQ--I 425 (433)
T ss_dssp ------TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEE-EECTTSCEEEEEETTTTE--E
T ss_pred ------CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceE-EEcCCCCEEEEEECCCCe--E
Confidence 23344444 33221 28999999887755444333344554 499999988877654543 6
Q ss_pred eEEEEE
Q 004067 441 HLYCAK 446 (776)
Q Consensus 441 ~l~~~~ 446 (776)
.+|.++
T Consensus 426 ~v~~~~ 431 (433)
T 3bws_A 426 RVYRRD 431 (433)
T ss_dssp EEEEET
T ss_pred EEEEec
Confidence 777653
No 185
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.75 E-value=1.6e-17 Score=167.66 Aligned_cols=233 Identities=13% Similarity=0.129 Sum_probs=151.5
Q ss_pred ccCCCCceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCC---cEEEE
Q 004067 518 RLQLEPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG---ILVWK 593 (776)
Q Consensus 518 ~~~~~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G---~~v~~ 593 (776)
...++..+.+++.+. .|..+.+++|.|++.. ..+++|+|+++||++..... ..| ........++.| ++|++
T Consensus 12 ~~~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~~Pvl~~lhG~~~~~~~-~~~---~~~~~~~~~~~g~~~~ivV~ 86 (275)
T 2qm0_A 12 QIITSNTEQWKMYSKLEGKEYQIHISKPKQPA-PDSGYPVIYVLDGNAFFQTF-HEA---VKIQSVRAEKTGVSPAIIVG 86 (275)
T ss_dssp CCCCTTEEEEEEECTTTCCEEEEEEECCSSCC-CTTCEEEEEEESHHHHHHHH-HHH---HHHHGGGHHHHCCCCCEEEE
T ss_pred ceecCCceEEEEEecCCCCEEEEEEECCCCCC-CCCCccEEEEecChHHHHHH-HHH---HHHHhhcchhcCCCCeEEEE
Confidence 445778889999986 6899999999998863 23689999999997532211 011 011112234567 99999
Q ss_pred ECCCCCCCCch-----hhhhh---------h-h---hccC-CccHHHHH--HHHHHHHHcCCCCCCcEEEEeechHHHHH
Q 004067 594 LDNRGTARRGL-----KFEAS---------I-K---HNCG-RIDAEDQL--TGAEWLIKQGLAKVGHIGLYGWSYGGYLS 652 (776)
Q Consensus 594 ~d~rg~g~~~~-----~~~~~---------~-~---~~~~-~~~~~D~~--~~i~~l~~~~~id~~~i~l~G~S~GG~~a 652 (776)
+|+|+.+.++. ++... . . ...+ ...+.+.+ ..+.++.++..+|.++++|+||||||+++
T Consensus 87 i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a 166 (275)
T 2qm0_A 87 VGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFA 166 (275)
T ss_dssp EECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHH
T ss_pred ECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHH
Confidence 99997532211 01000 0 0 0011 01223322 33445555556788899999999999999
Q ss_pred HHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHH
Q 004067 653 AITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARL 732 (776)
Q Consensus 653 ~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~ 732 (776)
+.++.++|+.|+++++.+|...|.... +... .+.+... ........|+++++|+.|..++..++.++
T Consensus 167 ~~~~~~~p~~f~~~~~~s~~~~~~~~~------~~~~----~~~~~~~---~~~~~~~~~~~l~~G~~D~~~~~~~~~~~ 233 (275)
T 2qm0_A 167 LHILFTNLNAFQNYFISSPSIWWNNKS------VLEK----EENLIIE---LNNAKFETGVFLTVGSLEREHMVVGANEL 233 (275)
T ss_dssp HHHHHHCGGGCSEEEEESCCTTHHHHG------GGGG----TTHHHHH---HHTCSSCEEEEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHhCchhhceeEEeCceeeeChHH------HHHH----HHHHHhh---hcccCCCceEEEEeCCcccchhhHHHHHH
Confidence 999999999999999999987553210 0000 0001000 00234457999999999998889999999
Q ss_pred HHHH---HHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 004067 733 INAL---VAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 772 (776)
Q Consensus 733 ~~~l---~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 772 (776)
++.| ++.+.++++.++|+++|+.. ....+...++||
T Consensus 234 ~~~L~~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 234 SERLLQVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred HHHHHhcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 9999 45677899999999999652 233345556665
No 186
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.75 E-value=2.5e-17 Score=175.17 Aligned_cols=233 Identities=13% Similarity=0.087 Sum_probs=150.9
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCccccc-----ccccccchhhhH---HHHhCCcEEEEECCCC-CCCCc
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC-----DSWINTVDMRAQ---YLRSKGILVWKLDNRG-TARRG 603 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~-----~~~~~~~~~~~~---~l~~~G~~v~~~d~rg-~g~~~ 603 (776)
+|..+++..+.+.+. .+.|+||++||.+++.... ..| |..++. .|++.||.|+++|+|| +|++.
T Consensus 42 ~g~~l~y~~~g~~~~----~~~~~vvllHG~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~ 114 (377)
T 2b61_A 42 SYINVAYQTYGTLND----EKNNAVLICHALTGDAEPYFDDGRDGW---WQNFMGAGLALDTDRYFFISSNVLGGCKGTT 114 (377)
T ss_dssp CSEEEEEEEESCCCT----TCCCEEEEECCTTCCSCSCCSSSCCCT---TGGGEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cceeEEEEecccccc----cCCCeEEEeCCCCCccccccccccchh---hhhccCcccccccCCceEEEecCCCCCCCCC
Confidence 455677777765432 2358999999987765420 001 232332 3667899999999999 57664
Q ss_pred hhhhh-hh-----hhccCCccHHHHHHHHHHHHHcCCCCCCcEE-EEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc
Q 004067 604 LKFEA-SI-----KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIG-LYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 676 (776)
Q Consensus 604 ~~~~~-~~-----~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~-l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~ 676 (776)
..... .. ...+....++++.+.+..+++.. +.+++. |+||||||.+++.+|.++|++++++|+.++.....
T Consensus 115 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 192 (377)
T 2b61_A 115 GPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL--GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFS 192 (377)
T ss_dssp CTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT--TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCC
T ss_pred CCcccCccccccccccCCcccHHHHHHHHHHHHHHc--CCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCcccc
Confidence 32110 00 01111345778888887777654 446887 99999999999999999999999999998864321
Q ss_pred ccc--------------cc--------------------------------ccccccCCCC---------CCccch----
Q 004067 677 GYD--------------TF--------------------------------YTEKYMGLPS---------EDPVGY---- 697 (776)
Q Consensus 677 ~~~--------------~~--------------------------------~~~~~~~~~~---------~~~~~~---- 697 (776)
... .. +...+..... .....+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (377)
T 2b61_A 193 AEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQ 272 (377)
T ss_dssp HHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHH
T ss_pred ccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhh
Confidence 000 00 0000000000 000000
Q ss_pred --------------------hc-------CChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEec-
Q 004067 698 --------------------EY-------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP- 749 (776)
Q Consensus 698 --------------------~~-------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~- 749 (776)
.. .+....+.++++|+|+++|++|.++++..+....+.+.+...+.++++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 352 (377)
T 2b61_A 273 GKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPS 352 (377)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred hhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCC
Confidence 00 01234567888999999999999999966556666666666778999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 750 DERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 750 ~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
++||.+ ..+..+++.+.+.+||.++
T Consensus 353 ~~gH~~-~~e~p~~~~~~i~~fl~~~ 377 (377)
T 2b61_A 353 DYGHDA-FLVDYDQFEKRIRDGLAGN 377 (377)
T ss_dssp TTGGGH-HHHCHHHHHHHHHHHHHTC
T ss_pred CCCchh-hhcCHHHHHHHHHHHHhcC
Confidence 999986 4456789999999999763
No 187
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=2.5e-18 Score=165.21 Aligned_cols=183 Identities=15% Similarity=0.061 Sum_probs=114.6
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhC--CcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
|+|||+||..++.. .| ....+.++++++ +|.|++||++|+|.+ ..+.++.+...
T Consensus 3 ptIl~lHGf~ss~~---s~--k~~~l~~~~~~~~~~~~v~~pdl~~~g~~-------------------~~~~l~~~~~~ 58 (202)
T 4fle_A 3 STLLYIHGFNSSPS---SA--KATTFKSWLQQHHPHIEMQIPQLPPYPAE-------------------AAEMLESIVMD 58 (202)
T ss_dssp CEEEEECCTTCCTT---CH--HHHHHHHHHHHHCTTSEEECCCCCSSHHH-------------------HHHHHHHHHHH
T ss_pred cEEEEeCCCCCCCC---cc--HHHHHHHHHHHcCCCcEEEEeCCCCCHHH-------------------HHHHHHHHHHh
Confidence 89999999654432 11 122345666665 599999999987521 22223333322
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccc-cccCCCCCCc--cchhcCChhhhhccC
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE-KYMGLPSEDP--VGYEYSSVMHHVHKM 709 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~i 709 (776)
. +.++|+|+|+||||++|+.+|.+++....+++...+............. .+...+.... .............++
T Consensus 59 ~--~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (202)
T 4fle_A 59 K--AGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQIEKLES 136 (202)
T ss_dssp H--TTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTCCSSCSC
T ss_pred c--CCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhhhhhhcc
Confidence 1 4569999999999999999999999876666555443221110000000 0000000000 000111222345667
Q ss_pred CCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 710 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 710 ~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
++|+|++||++|++||++++.++++ ++++.++++++|.+. ..+++++.+.+||+
T Consensus 137 ~~P~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~g~~H~~~---~~~~~~~~I~~FL~ 190 (202)
T 4fle_A 137 PDLLWLLQQTGDEVLDYRQAVAYYT-------PCRQTVESGGNHAFV---GFDHYFSPIVTFLG 190 (202)
T ss_dssp GGGEEEEEETTCSSSCHHHHHHHTT-------TSEEEEESSCCTTCT---TGGGGHHHHHHHHT
T ss_pred CceEEEEEeCCCCCCCHHHHHHHhh-------CCEEEEECCCCcCCC---CHHHHHHHHHHHHh
Confidence 7899999999999999998877753 468999999999874 34567889999985
No 188
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.74 E-value=2.3e-15 Score=159.01 Aligned_cols=289 Identities=13% Similarity=0.039 Sum_probs=189.2
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+..+.. ..|.+||+.+++....... +...+..+.|+|
T Consensus 35 v~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~-----------------------h~~~v~~~~~~~-- 84 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKD-----SSASVWYSLNGERLGTLDG-----------------------HTGTIWSIDVDC-- 84 (369)
T ss_dssp EEEEEECTTSCEEEEEESS-----SCEEEEETTTCCEEEEECC-----------------------CSSCEEEEEECT--
T ss_pred EEEEEEcCCCCEEEEEeCC-----CEEEEEeCCCchhhhhhhh-----------------------cCCcEEEEEEcC--
Confidence 4789999999999976542 3699999998876544431 124688999999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC------CcEEEEecCCCceeE-Eee-
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD------CELHVLNLLINEQRQ-LTH- 207 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~------~~l~~~~l~~g~~~~-lt~- 207 (776)
||+.|+.. .++.|++||+.+++....+. .. ..+..+.|+|||+.++.... +.|.+|++.++.... +..
T Consensus 85 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~-~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 161 (369)
T 3zwl_B 85 -FTKYCVTGSADYSIKLWDVSNGQCVATWK-SP-VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKV 161 (369)
T ss_dssp -TSSEEEEEETTTEEEEEETTTCCEEEEEE-CS-SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEE
T ss_pred -CCCEEEEEeCCCeEEEEECCCCcEEEEee-cC-CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccc
Confidence 99999876 67889999999988773443 33 34888999999999999876 479999988664321 111
Q ss_pred CCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEE
Q 004067 208 GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRL 287 (776)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l 287 (776)
.........+. .....+..+.|+|||+.|+....+ ..|
T Consensus 162 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~d------------------------------------g~i 199 (369)
T 3zwl_B 162 SEEPIHKIITH------EGLDAATVAGWSTKGKYIIAGHKD------------------------------------GKI 199 (369)
T ss_dssp CSSCSEEEECC------TTCCCEEEEEECGGGCEEEEEETT------------------------------------SEE
T ss_pred ccceeeeccCC------cCccceeEEEEcCCCCEEEEEcCC------------------------------------CEE
Confidence 11100000000 011135678999999988876532 358
Q ss_pred EEEEcCC-CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecc
Q 004067 288 GVVSAAG-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 366 (776)
Q Consensus 288 ~~~d~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 366 (776)
++||+.+ ++.... . ..+...+..+.|+|||+.|+... .+..|.+||+.++..............
T Consensus 200 ~i~d~~~~~~~~~~-~-------~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~v~d~~~~~~~~~~~~~~~~~~--- 264 (369)
T 3zwl_B 200 SKYDVSNNYEYVDS-I-------DLHEKSISDMQFSPDLTYFITSS----RDTNSFLVDVSTLQVLKKYETDCPLNT--- 264 (369)
T ss_dssp EEEETTTTTEEEEE-E-------ECCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTCCEEEEEECSSCEEE---
T ss_pred EEEECCCCcEeEEE-E-------ecCCCceeEEEECCCCCEEEEec----CCceEEEEECCCCceeeeecCCCCcee---
Confidence 9999988 343322 1 34566789999999999887765 345799999999887666554333111
Q ss_pred cccccCCCCccccCCeEEEEecc------------CCceEEEEEeCCCcee-eccccCCeEEEEEEeecCCCcEEEEEEc
Q 004067 367 DCFTPLDKGVTKYSGGFIWASEK------------TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGT 433 (776)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~s~~------------~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~dg~~i~~~~~ 433 (776)
..|+|. +.+++.... .+...+.+|+...++. ..+..+...+..+. |+|+|+.|+..+
T Consensus 265 ~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~s~~- 334 (369)
T 3zwl_B 265 AVITPL--------KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVA-ISPQGTSYASGG- 334 (369)
T ss_dssp EEECSS--------SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEE-ECTTSSEEEEEE-
T ss_pred EEecCC--------CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEE-ECCCCCEEEEEc-
Confidence 123332 223333222 2233789999876654 45555556666655 999999655544
Q ss_pred cCCCceeeEEEEEe
Q 004067 434 LDGPLESHLYCAKL 447 (776)
Q Consensus 434 ~~~~~~~~l~~~~~ 447 (776)
.++ .+.+|.++-
T Consensus 335 ~dg--~v~iw~~~~ 346 (369)
T 3zwl_B 335 EDG--FIRLHHFEK 346 (369)
T ss_dssp TTS--EEEEEEECH
T ss_pred CCC--eEEEEECcc
Confidence 343 378888763
No 189
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.74 E-value=3.8e-16 Score=168.64 Aligned_cols=331 Identities=8% Similarity=0.016 Sum_probs=203.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
.+.++|||||++|+..+.. ..|++||..+++....... ........|+|
T Consensus 59 ~~~~~~s~~g~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~------------------------~~~~~~~~~~~-- 107 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLD-----GHDFLFNTIIRDGSKMLKR------------------------ADYTAVDTAKL-- 107 (420)
T ss_dssp CTTCEEEEEETTEEEEEET-----TEEEEEECCSEETTTTSCS------------------------CCEEEEEEECS--
T ss_pred ccceeeeecCCeEEEEEcC-----CcEEEEEecccceeeEEec------------------------CCceEEEEEec--
Confidence 3689999999999977653 4699999987764322210 11233446888
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCce
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTV 214 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~ 214 (776)
||+.|+.. .++.|.+||+.+++....+.... ..+..+.|+|||+.|+..+. +.|.+|++.+++..........
T Consensus 108 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~--- 182 (420)
T 3vl1_A 108 -QMRRFILGTTEGDIKVLDSNFNLQREIDQAHV-SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA--- 182 (420)
T ss_dssp -SSCEEEEEETTSCEEEECTTSCEEEEETTSSS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS---
T ss_pred -CCCEEEEEECCCCEEEEeCCCcceeeeccccc-CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC---
Confidence 99999987 67899999999988773333433 35889999999999988875 5799999998865443222111
Q ss_pred ecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC
Q 004067 215 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG 294 (776)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 294 (776)
.+..+.|+|||+.|+..+.+ ..|.+||+.+
T Consensus 183 --------------~v~~~~~~~~~~~l~s~~~d------------------------------------~~v~iwd~~~ 212 (420)
T 3vl1_A 183 --------------TVTDIAIIDRGRNVLSASLD------------------------------------GTIRLWECGT 212 (420)
T ss_dssp --------------CEEEEEEETTTTEEEEEETT------------------------------------SCEEEEETTT
T ss_pred --------------cEEEEEEcCCCCEEEEEcCC------------------------------------CcEEEeECCC
Confidence 14578999999999876643 2368888887
Q ss_pred CceEEEEcccCCC-C---------------CCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec
Q 004067 295 GPVSWMDLQCGGT-D---------------QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE 358 (776)
Q Consensus 295 ~~~~~l~~~~~~~-~---------------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 358 (776)
++....-.....+ . .......+..++|+|||+.++... .+..|.+||+.++.........
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH----VSGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE----TTSCEEEEETTTCCEEEEECCT
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc----CCCeEEEEECCCCceeEEcccc
Confidence 7654432110000 0 000123344567899999887665 3445999999888754433221
Q ss_pred cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce--eecccc-CCeEEEEEEeecCCCcEEEEEEccC
Q 004067 359 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC--LGPITE-GDWMVEQIVGVNEASGQVYFTGTLD 435 (776)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~--~~~lt~-~~~~~~~~~~~s~dg~~i~~~~~~~ 435 (776)
....+ ..-.|+| ++..++++...+| .|++||+.+++ ...+.. +...+... ++++++ +++++..+
T Consensus 289 ~~~~v-~~~~~~~-------~~~~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~l~s~~~d 355 (420)
T 3vl1_A 289 FTCSC-NSLTVDG-------NNANYIYAGYENG--MLAQWDLRSPECPVGEFLINEGTPINNV--YFAAGA-LFVSSGFD 355 (420)
T ss_dssp TSSCE-EEEEECS-------SCTTEEEEEETTS--EEEEEETTCTTSCSEEEEESTTSCEEEE--EEETTE-EEEEETTT
T ss_pred cCCCc-eeEEEeC-------CCCCEEEEEeCCC--eEEEEEcCCCcCchhhhhccCCCCceEE--EeCCCC-EEEEecCC
Confidence 11110 0011222 1222677777777 89999987653 344544 33344444 445676 45555555
Q ss_pred CCceeeEEEEEeCCCCCCc----cccceeecCC-CCeEEEEEcCCcC---EEEEEeeCCCCCCEEEEEEcC
Q 004067 436 GPLESHLYCAKLYPDWNHT----LEAPVKLTNG-KGKHVAVLDHNMR---NFVDFHDSLDSPPRILLCSLQ 498 (776)
Q Consensus 436 ~~~~~~l~~~~~~~~g~~~----~~~~~~l~~~-~~~~~~~~spdg~---~l~~~~~~~~~~~~i~~~~~~ 498 (776)
+ .+.+|.+.. ..... ......+... ..+..+.|+||++ .++.+.+. +.+.+|+..
T Consensus 356 ~--~v~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~----g~~~~~~~~ 418 (420)
T 3vl1_A 356 T--SIKLDIISD--PESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKN----NFCALYNLS 418 (420)
T ss_dssp E--EEEEEEECC--TTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETT----TEEEEEESC
T ss_pred c--cEEEEeccC--CCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCC----ceEEEEecc
Confidence 3 478888764 11100 0112222222 3466789999999 77766543 356666653
No 190
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.74 E-value=5.2e-17 Score=154.85 Aligned_cols=182 Identities=10% Similarity=0.030 Sum_probs=122.3
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhC-CcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
+.|+||++||++++......|. ..++..|++. ||.|+++|+||++.. ++...++.+.+
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~---~~~~~~l~~~~g~~vi~~d~~g~~~~------------------~~~~~~~~~~~ 61 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWY---GWVKKELEKIPGFQCLAKNMPDPITA------------------RESIWLPFMET 61 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTH---HHHHHHHTTSTTCCEEECCCSSTTTC------------------CHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCcccchHH---HHHHHHHhhccCceEEEeeCCCCCcc------------------cHHHHHHHHHH
Confidence 4589999999876531011221 1146778777 999999999975311 13334444444
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCC
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKG 711 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 711 (776)
...+ .++++++||||||.+++.++.++| ++++++.+|..............+... ......+.++..
T Consensus 62 ~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 128 (194)
T 2qs9_A 62 ELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENERASGYFTR----------PWQWEKIKANCP 128 (194)
T ss_dssp TSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHHHHHTSTTSS----------CCCHHHHHHHCS
T ss_pred HhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhhhHHHhhhcc----------cccHHHHHhhCC
Confidence 4322 268999999999999999999998 899999888654211000000111111 112234555678
Q ss_pred cEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 712 KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 712 P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
|+|+++|++|..+|+..+..+.+.+ +.+++++++++|.+. .+..+ .+..+.+||++.
T Consensus 129 p~lii~G~~D~~vp~~~~~~~~~~~-----~~~~~~~~~~gH~~~-~~~p~-~~~~~~~fl~~~ 185 (194)
T 2qs9_A 129 YIVQFGSTDDPFLPWKEQQEVADRL-----ETKLHKFTDCGHFQN-TEFHE-LITVVKSLLKVP 185 (194)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEESSCTTSCS-SCCHH-HHHHHHHHHTCC
T ss_pred CEEEEEeCCCCcCCHHHHHHHHHhc-----CCeEEEeCCCCCccc-hhCHH-HHHHHHHHHHhh
Confidence 9999999999999999999888877 348999999999873 44454 455666999764
No 191
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.74 E-value=5.6e-17 Score=164.04 Aligned_cols=231 Identities=14% Similarity=0.074 Sum_probs=151.0
Q ss_pred CCceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCC
Q 004067 522 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 600 (776)
Q Consensus 522 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g 600 (776)
.+.+.+++.+. .|..+.++ |.|.+ + |+||++||+++... ...|... ..+.+.+++.||+|+++|+++++
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~------~-p~vvllHG~~~~~~-~~~w~~~-~~~~~~~~~~~~~vv~pd~~~~~ 78 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG------P-HAVYLLDAFNAGPD-VSNWVTA-GNAMNTLAGKGISVVAPAGGAYS 78 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS------S-SEEEEECCSSCCSS-SCHHHHT-SCHHHHHTTSSSEEEEECCCTTS
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC------C-CEEEEECCCCCCCC-hhhhhhc-ccHHHHHhcCCeEEEEECCCCCC
Confidence 46788888875 67888888 77754 1 79999999743211 1223211 11356677889999999997653
Q ss_pred CCchhhhhhhhhccCCccHHH-H-HHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc
Q 004067 601 RRGLKFEASIKHNCGRIDAED-Q-LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 678 (776)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~D-~-~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 678 (776)
.+.. +.... .+ ...+ + ...+.++.++..++.++++|+|+||||++|+.++.++|++|+++++.+|..++...
T Consensus 79 ~~~~-~~~~~---~~--~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~ 152 (280)
T 1r88_A 79 MYTN-WEQDG---SK--QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNT 152 (280)
T ss_dssp TTSB-CSSCT---TC--BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSH
T ss_pred ccCC-CCCCC---CC--cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCc
Confidence 2211 10000 01 1211 1 23344444434567789999999999999999999999999999999998775432
Q ss_pred cc-------------cccccccCCCCCCccchhcCChhhhhccC---CCcEEEEe----cCCCCc-------cChHHHHH
Q 004067 679 DT-------------FYTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVH----GMIDEN-------VHFRHTAR 731 (776)
Q Consensus 679 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~P~lii~----G~~D~~-------v~~~~~~~ 731 (776)
.. ......++.+. ...+...++...+.++ ..|+++.+ |+.|.. ++...+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~ 230 (280)
T 1r88_A 153 TTNGAIAAGMQQFGGVDTNGMWGAPQ--LGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRM 230 (280)
T ss_dssp HHHHHHHHHHHHHHCCCTHHHHCCGG--GSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHH
T ss_pred cchhhHHHHhhhccccchhhhcCCCc--hhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHH
Confidence 10 00011112221 1234555666555555 47999999 999984 58889999
Q ss_pred HHHHHHHCC-CCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 732 LINALVAAR-KPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 732 ~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
+++.|++.+ .++++.++++++|.+. .....+...+.||.
T Consensus 231 ~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~~~ 270 (280)
T 1r88_A 231 FYNQYRSVGGHNGHFDFPASGDNGWG---SWAPQLGAMSGDIV 270 (280)
T ss_dssp HHHHHHHTTCCSEEEECCSSCCSSHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcceEEEecCCCCcChh---HHHHHHHHHHHHHH
Confidence 999999999 9999999888899753 23333444555554
No 192
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.74 E-value=4.4e-17 Score=171.72 Aligned_cols=122 Identities=14% Similarity=0.062 Sum_probs=89.5
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.+|..+++..+.|++ +..|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+......
T Consensus 10 ~~g~~l~y~~~G~~~-----~~~~~vv~~hG~~~~~~-------~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~--- 74 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD-----QQGPLVVLLHGFPESWY-------SWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQ--- 74 (356)
T ss_dssp ETTEEEEEEEECCTT-----CCSCEEEEECCTTCCGG-------GGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSG---
T ss_pred cCCeEEEEEEecCCC-----CCCCEEEEECCCCCcHH-------HHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcc---
Confidence 478889999988753 23478999999876543 234457888889999999999999988643210
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
......++.+.+..+++.. +.++++++||||||.+++.++.++|++++++|+.++..
T Consensus 75 ---~~~~~~~~~~~~~~~~~~l--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 75 ---KAYRIKELVGDVVGVLDSY--GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp ---GGGSHHHHHHHHHHHHHHT--TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred ---cccCHHHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 0112444444444444432 45689999999999999999999999999999877543
No 193
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.74 E-value=1.3e-17 Score=177.16 Aligned_cols=203 Identities=13% Similarity=0.157 Sum_probs=137.2
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhh--------
Q 004067 535 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF-------- 606 (776)
Q Consensus 535 ~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~-------- 606 (776)
..+++....|... .+++|+||++||+++... .+..+++.|+++||.|+++|+||+|.+....
T Consensus 82 ~~~p~~~~~P~~~---~~~~P~Vv~~HG~~~~~~-------~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~ 151 (383)
T 3d59_A 82 MTTPANWNSPLRP---GEKYPLVVFSHGLGAFRT-------LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAE 151 (383)
T ss_dssp CEESSEETCCBCC---SSCEEEEEEECCTTCCTT-------TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHH
T ss_pred eeeccccCCCccc---CCCCCEEEEcCCCCCCch-------HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccc
Confidence 4444444444332 147899999999876543 2345688999999999999999988753200
Q ss_pred -------------hh-h--hhhccCCccHHHHHHHHHHHHH--------------------cCCCCCCcEEEEeechHHH
Q 004067 607 -------------EA-S--IKHNCGRIDAEDQLTGAEWLIK--------------------QGLAKVGHIGLYGWSYGGY 650 (776)
Q Consensus 607 -------------~~-~--~~~~~~~~~~~D~~~~i~~l~~--------------------~~~id~~~i~l~G~S~GG~ 650 (776)
.. . ..........+|+..+++++.+ ...+|.++|+++||||||.
T Consensus 152 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~ 231 (383)
T 3d59_A 152 IGDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGA 231 (383)
T ss_dssp HTCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHH
T ss_pred cCCceeeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHH
Confidence 00 0 0000001125688889998876 3456788999999999999
Q ss_pred HHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHH
Q 004067 651 LSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 730 (776)
Q Consensus 651 ~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~ 730 (776)
+++.++.+.+ +++++|+.+|... +.. ...+.+++.|+|++||++|..+ .. .
T Consensus 232 ~a~~~a~~~~-~v~a~v~~~~~~~---------------p~~----------~~~~~~i~~P~Lii~g~~D~~~--~~-~ 282 (383)
T 3d59_A 232 TVIQTLSEDQ-RFRCGIALDAWMF---------------PLG----------DEVYSRIPQPLFFINSEYFQYP--AN-I 282 (383)
T ss_dssp HHHHHHHHCT-TCCEEEEESCCCT---------------TCC----------GGGGGSCCSCEEEEEETTTCCH--HH-H
T ss_pred HHHHHHhhCC-CccEEEEeCCccC---------------CCc----------hhhhccCCCCEEEEecccccch--hh-H
Confidence 9999988765 5899999877421 100 0224677899999999999754 22 2
Q ss_pred HHHHHHHHCCCCeEEEEecCCCCCCCC------------------CCcH----HHHHHHHHHHHHHhC
Q 004067 731 RLINALVAARKPYEILIFPDERHMPRR------------------HRDR----IYMEERIWEFIERTL 776 (776)
Q Consensus 731 ~~~~~l~~~~~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~~~~fl~~~l 776 (776)
+..+.+.+.+.+.+++++++++|.+.. .... ..+.+.+.+||+++|
T Consensus 283 ~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L 350 (383)
T 3d59_A 283 IKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHL 350 (383)
T ss_dssp HHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHc
Confidence 334566566788999999999998521 1122 334457999999875
No 194
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.74 E-value=5.3e-17 Score=159.62 Aligned_cols=212 Identities=14% Similarity=0.060 Sum_probs=132.9
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh--CCcEEEEECCCCCCC
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRGTAR 601 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rg~g~ 601 (776)
.+.+.|.+ ..+.+.++.|.. +..++||++||.+++.. .| ..++..+.. .++.+++|+-+-...
T Consensus 15 ~~~~~~~~---~~l~y~ii~P~~-----~~~~~VI~LHG~G~~~~---dl----~~l~~~l~~~~~~~~~i~P~Ap~~~~ 79 (246)
T 4f21_A 15 TENLYFQS---NAMNYELMEPAK-----QARFCVIWLHGLGADGH---DF----VDIVNYFDVSLDEIRFIFPHADIIPV 79 (246)
T ss_dssp -----------CCCCEEEECCSS-----CCCEEEEEEEC--CCCC---CG----GGGGGGCCSCCTTEEEEEECGGGSCT
T ss_pred cceEEEec---CCcCceEeCCCC-----cCCeEEEEEcCCCCCHH---HH----HHHHHHhhhcCCCeEEEeCCCCcccc
Confidence 34455554 247788888876 34579999999665432 22 223444432 368889987532110
Q ss_pred C------chhhhh-------hhhhccCCccHHHHHHHHHHHHH---cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEE
Q 004067 602 R------GLKFEA-------SIKHNCGRIDAEDQLTGAEWLIK---QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 665 (776)
Q Consensus 602 ~------~~~~~~-------~~~~~~~~~~~~D~~~~i~~l~~---~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~ 665 (776)
. +..|.. ..........+....+.+..+++ ...++.+||++.|+|+||++++.++.++|+.+++
T Consensus 80 ~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~ 159 (246)
T 4f21_A 80 TINMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGG 159 (246)
T ss_dssp TTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCE
T ss_pred ccCCCCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCcccccc
Confidence 0 000100 00000011112333333333332 2458999999999999999999999999999999
Q ss_pred EEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEE
Q 004067 666 AVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 745 (776)
Q Consensus 666 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 745 (776)
++++++...... .+.. .. .....+.|++++||+.|++||+..++++++.|++.|.++++
T Consensus 160 ~i~~sG~lp~~~-------~~~~----------~~----~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~ 218 (246)
T 4f21_A 160 IMALSTYLPAWD-------NFKG----------KI----TSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEY 218 (246)
T ss_dssp EEEESCCCTTHH-------HHST----------TC----CGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEE
T ss_pred ceehhhccCccc-------cccc----------cc----cccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEE
Confidence 999988642110 0000 00 01123479999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 746 LIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 746 ~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
..||+.||.+. .+....+.+||++.|
T Consensus 219 ~~y~g~gH~i~-----~~~l~~~~~fL~k~l 244 (246)
T 4f21_A 219 KHYVGMQHSVC-----MEEIKDISNFIAKTF 244 (246)
T ss_dssp EEESSCCSSCC-----HHHHHHHHHHHHHHT
T ss_pred EEECCCCCccC-----HHHHHHHHHHHHHHh
Confidence 99999999873 344678999999876
No 195
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.74 E-value=1.1e-17 Score=187.96 Aligned_cols=225 Identities=11% Similarity=0.025 Sum_probs=151.6
Q ss_pred CCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 004067 522 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 601 (776)
Q Consensus 522 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~ 601 (776)
...+...+.+.||.++++.... +.|+||++||++++.. .|..++..|+++||.|+++|+||+|.
T Consensus 235 ~~~~~~~~~~~dg~~l~~~~~g---------~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~D~~G~G~ 298 (555)
T 3i28_A 235 SDMSHGYVTVKPRVRLHFVELG---------SGPAVCLCHGFPESWY-------SWRYQIPALAQAGYRVLAMDMKGYGE 298 (555)
T ss_dssp GGSEEEEEEEETTEEEEEEEEC---------SSSEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTT
T ss_pred cccceeEEEeCCCcEEEEEEcC---------CCCEEEEEeCCCCchh-------HHHHHHHHHHhCCCEEEEecCCCCCC
Confidence 3456677777799999887764 2378999999877644 34456788999999999999999998
Q ss_pred CchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccc---
Q 004067 602 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY--- 678 (776)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~--- 678 (776)
+...... ......++.+.+..+++.. +.++++++||||||.+++.++.++|++++++|+.++.......
T Consensus 299 S~~~~~~------~~~~~~~~~~d~~~~~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 370 (555)
T 3i28_A 299 SSAPPEI------EEYCMEVLCKEMVTFLDKL--GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMS 370 (555)
T ss_dssp SCCCSCG------GGGSHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSC
T ss_pred CCCCCCc------ccccHHHHHHHHHHHHHHc--CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccc
Confidence 8643210 1122444444444444332 3468999999999999999999999999999988764321000
Q ss_pred -------------------------------cccccccc--------------------cCCCCC-------Cc---cch
Q 004067 679 -------------------------------DTFYTEKY--------------------MGLPSE-------DP---VGY 697 (776)
Q Consensus 679 -------------------------------~~~~~~~~--------------------~~~~~~-------~~---~~~ 697 (776)
...+...+ ...+.. .. ..+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (555)
T 3i28_A 371 PLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFY 450 (555)
T ss_dssp HHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHH
T ss_pred hHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHH
Confidence 00000000 000000 00 000
Q ss_pred ----hc------------------CChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCC
Q 004067 698 ----EY------------------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 755 (776)
Q Consensus 698 ----~~------------------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 755 (776)
.. .+....+.++++|+|+++|++|..+|+..+..+.+.+ .+.++++++++||.+
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~ 526 (555)
T 3i28_A 451 VQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI----PHLKRGHIEDCGHWT 526 (555)
T ss_dssp HHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC----TTCEEEEETTCCSCH
T ss_pred HHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC----CCceEEEeCCCCCCc
Confidence 00 0111234578899999999999999998887776654 567999999999976
Q ss_pred CCCCcHHHHHHHHHHHHHHh
Q 004067 756 RRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 756 ~~~~~~~~~~~~~~~fl~~~ 775 (776)
..+..+++.+.+.+||++.
T Consensus 527 -~~e~p~~~~~~i~~fl~~~ 545 (555)
T 3i28_A 527 -QMDKPTEVNQILIKWLDSD 545 (555)
T ss_dssp -HHHSHHHHHHHHHHHHHHH
T ss_pred -chhCHHHHHHHHHHHHHhc
Confidence 4567889999999999875
No 196
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.74 E-value=9.2e-18 Score=169.56 Aligned_cols=203 Identities=14% Similarity=0.129 Sum_probs=133.8
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 634 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 634 (776)
|+||++||.+++.. .| ..++..|++ +|.|+++|+||+|.|........ ....++++.+.+..+++.-
T Consensus 21 ~~vvllHG~~~~~~---~w----~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~----~~~~~~~~a~dl~~~l~~l- 87 (271)
T 1wom_A 21 ASIMFAPGFGCDQS---VW----NAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLN----RYQTLDGYAQDVLDVCEAL- 87 (271)
T ss_dssp SEEEEECCTTCCGG---GG----TTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTT----GGGSHHHHHHHHHHHHHHT-
T ss_pred CcEEEEcCCCCchh---hH----HHHHHHHHh-cCeEEEECCCCCCCCCCCccccc----ccccHHHHHHHHHHHHHHc-
Confidence 78999999766543 23 334566765 69999999999998864210000 0112444444444444432
Q ss_pred CCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc----cccc----------------c-------ccccc
Q 004067 635 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG----YDTF----------------Y-------TEKYM 687 (776)
Q Consensus 635 id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~----~~~~----------------~-------~~~~~ 687 (776)
+.+++.++||||||.+++.+|.++|++++++|+.++...... +... + .....
T Consensus 88 -~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (271)
T 1wom_A 88 -DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVL 166 (271)
T ss_dssp -TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 346899999999999999999999999999999877532110 0000 0 00000
Q ss_pred CCCCCC--ccc----h---------------hcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEE
Q 004067 688 GLPSED--PVG----Y---------------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 746 (776)
Q Consensus 688 ~~~~~~--~~~----~---------------~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 746 (776)
+.+... ... + ...+....+.++++|+|+++|++|..+++.....+.+.+ .+.+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~----~~~~~~ 242 (271)
T 1wom_A 167 NQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL----PYSSLK 242 (271)
T ss_dssp CCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHS----SSEEEE
T ss_pred cCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHC----CCCEEE
Confidence 111000 000 0 011222346788999999999999999988777776654 458999
Q ss_pred EecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 747 IFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 747 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+++++||.+ ..+.++++.+.+.+||.+++
T Consensus 243 ~i~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 243 QMEARGHCP-HMSHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp EEEEESSCH-HHHCHHHHHHHHHHHHHHHC
T ss_pred EeCCCCcCc-cccCHHHHHHHHHHHHHhcC
Confidence 999999976 55678899999999999874
No 197
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.74 E-value=1.2e-17 Score=168.40 Aligned_cols=198 Identities=14% Similarity=0.138 Sum_probs=133.5
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 634 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 634 (776)
|.||++||.+++.. .|..++..|++. |.|+++|+||+|.|...... .+.++++.+.+..+++..
T Consensus 17 ~~vvllHG~~~~~~-------~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~-------~~~~~~~~~dl~~~l~~l- 80 (269)
T 2xmz_A 17 QVLVFLHGFLSDSR-------TYHNHIEKFTDN-YHVITIDLPGHGEDQSSMDE-------TWNFDYITTLLDRILDKY- 80 (269)
T ss_dssp EEEEEECCTTCCGG-------GGTTTHHHHHTT-SEEEEECCTTSTTCCCCTTS-------CCCHHHHHHHHHHHHGGG-
T ss_pred CeEEEEcCCCCcHH-------HHHHHHHHHhhc-CeEEEecCCCCCCCCCCCCC-------ccCHHHHHHHHHHHHHHc-
Confidence 46999999877644 234457778765 99999999999988642110 234666666666666543
Q ss_pred CCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc------------------cc---ccccccCC----
Q 004067 635 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------------TF---YTEKYMGL---- 689 (776)
Q Consensus 635 id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~------------------~~---~~~~~~~~---- 689 (776)
..+++.++||||||.+|+.+|.++|++++++|+.++........ .. +...+...
T Consensus 81 -~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (269)
T 2xmz_A 81 -KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQ 159 (269)
T ss_dssp -TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGG
T ss_pred -CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCcccc
Confidence 34689999999999999999999999999999988754321000 00 00000000
Q ss_pred -----CC------------CCcc----ch------hcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCC
Q 004067 690 -----PS------------EDPV----GY------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 742 (776)
Q Consensus 690 -----~~------------~~~~----~~------~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 742 (776)
+. .... .+ ...+....+.++++|+|+++|++|..+++.... +.+. -.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~----~~~ 234 (269)
T 2xmz_A 160 SQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANL----IPN 234 (269)
T ss_dssp GGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHH----STT
T ss_pred ccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhh----CCC
Confidence 00 0000 00 001123356788899999999999998876543 4443 357
Q ss_pred eEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 743 YEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 743 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
.++++++++||.+ ..+.++++.+.+.+||++.
T Consensus 235 ~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 235 SKCKLISATGHTI-HVEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp EEEEEETTCCSCH-HHHSHHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCCCCh-hhcCHHHHHHHHHHHHHHh
Confidence 8999999999987 4567889999999999764
No 198
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.74 E-value=2.8e-17 Score=167.05 Aligned_cols=213 Identities=14% Similarity=0.109 Sum_probs=140.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 612 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~ 612 (776)
+|..+++.... ..|.||++||...+...... |...+..| ..+|.|+++|+||+|.|.....
T Consensus 13 ~g~~l~y~~~G---------~g~~vvllHG~~~~~~~~~~----w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~----- 73 (282)
T 1iup_A 13 AGVLTNYHDVG---------EGQPVILIHGSGPGVSAYAN----WRLTIPAL-SKFYRVIAPDMVGFGFTDRPEN----- 73 (282)
T ss_dssp TTEEEEEEEEC---------CSSEEEEECCCCTTCCHHHH----HTTTHHHH-TTTSEEEEECCTTSTTSCCCTT-----
T ss_pred CCEEEEEEecC---------CCCeEEEECCCCCCccHHHH----HHHHHHhh-ccCCEEEEECCCCCCCCCCCCC-----
Confidence 67888887653 12579999995432211112 33345556 5689999999999998864311
Q ss_pred ccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc----------ccc--
Q 004067 613 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG----------YDT-- 680 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------~~~-- 680 (776)
..+.++++.+.+..+++.. ..+++.|+||||||.+|+.+|.++|++++++|+.+|...... +..
T Consensus 74 --~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (282)
T 1iup_A 74 --YNYSKDSWVDHIIGIMDAL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSI 149 (282)
T ss_dssp --CCCCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCH
T ss_pred --CCCCHHHHHHHHHHHHHHh--CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcH
Confidence 0123556665555555543 346899999999999999999999999999999887542100 000
Q ss_pred -c---cccccc------------------CCCCCCccchhc-------------CChhhhhccCCCcEEEEecCCCCccC
Q 004067 681 -F---YTEKYM------------------GLPSEDPVGYEY-------------SSVMHHVHKMKGKLLLVHGMIDENVH 725 (776)
Q Consensus 681 -~---~~~~~~------------------~~~~~~~~~~~~-------------~~~~~~~~~i~~P~lii~G~~D~~v~ 725 (776)
. +...+. ..+. ....+.. ......+.++++|+|+++|++|..+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p 228 (282)
T 1iup_A 150 ENMRNLLDIFAYDRSLVTDELARLRYEASIQPG-FQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVP 228 (282)
T ss_dssp HHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTT-HHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred HHHHHHHHHhhcCcccCCHHHHHHHHhhccChH-HHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCC
Confidence 0 000000 0000 0000000 00114567889999999999999999
Q ss_pred hHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 726 FRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 726 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
+..+.++.+.+ .+.++++++++||.. ..+.++++.+.+.+||.+
T Consensus 229 ~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 229 LSSSLRLGELI----DRAQLHVFGRCGHWT-QIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp HHHHHHHHHHC----TTEEEEEESSCCSCH-HHHSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC----CCCeEEEECCCCCCc-cccCHHHHHHHHHHHHhc
Confidence 98887777664 567999999999986 556788999999999975
No 199
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.74 E-value=4.5e-17 Score=163.71 Aligned_cols=201 Identities=13% Similarity=0.100 Sum_probs=131.2
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
..|.||++||.+++.. .|..++..|++.||.|+++|+||+|.|..... ....++++.+.+..+++.
T Consensus 9 ~g~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~ 74 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAW-------IWYKLKPLLESAGHKVTAVDLSAAGINPRRLD-------EIHTFRDYSEPLMEVMAS 74 (264)
T ss_dssp CCCEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCccccc-------hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcc-------cccCHHHHHHHHHHHHHH
Confidence 4478999999865543 34556788888999999999999998864211 012355555555545443
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCc---cc------ccc-----ccccc---ccCCCC----
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW---DG------YDT-----FYTEK---YMGLPS---- 691 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~---~~------~~~-----~~~~~---~~~~~~---- 691 (776)
-. ..+++.|+||||||.+++.++.++|++++++|+.++.... .. +.. .+... ....+.
T Consensus 75 l~-~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
T 2wfl_A 75 IP-PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGM 153 (264)
T ss_dssp SC-TTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEE
T ss_pred hC-CCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcc
Confidence 21 1358999999999999999999999999999988763210 00 000 00000 000000
Q ss_pred ---CCccc-----hh--------------cC-----------ChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHH
Q 004067 692 ---EDPVG-----YE--------------YS-----------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 738 (776)
Q Consensus 692 ---~~~~~-----~~--------------~~-----------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 738 (776)
..... +. .. .........++|+|+++|++|..+++...+.+.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-- 231 (264)
T 2wfl_A 154 SMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESV-- 231 (264)
T ss_dssp EEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHH--
T ss_pred hhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhC--
Confidence 00000 00 00 000000012579999999999999999888887776
Q ss_pred CCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 739 ARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 739 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
.+.++++++++||.. ..+.++++.+.+.+|++
T Consensus 232 --p~~~~~~i~~~gH~~-~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 232 --GADKVKEIKEADHMG-MLSQPREVCKCLLDISD 263 (264)
T ss_dssp --CCSEEEEETTCCSCH-HHHSHHHHHHHHHHHHC
T ss_pred --CCceEEEeCCCCCch-hhcCHHHHHHHHHHHhh
Confidence 456999999999987 66788899999999975
No 200
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.74 E-value=4.2e-17 Score=166.49 Aligned_cols=213 Identities=16% Similarity=0.137 Sum_probs=138.4
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhh-HHHHhCCcEEEEECCCCCCCCchhhhhhhhhc
Q 004067 535 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTARRGLKFEASIKHN 613 (776)
Q Consensus 535 ~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~ 613 (776)
..+++....+ ..|+||++||.+.+...... |...+ ..|++. |.|+++|+||+|.|.....
T Consensus 25 ~~l~y~~~g~--------g~~~vvllHG~~~~~~~~~~----~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~------ 85 (289)
T 1u2e_A 25 LRIHFNDCGQ--------GDETVVLLHGSGPGATGWAN----FSRNIDPLVEAG-YRVILLDCPGWGKSDSVVN------ 85 (289)
T ss_dssp EEEEEEEECC--------CSSEEEEECCCSTTCCHHHH----TTTTHHHHHHTT-CEEEEECCTTSTTSCCCCC------
T ss_pred EEEEEeccCC--------CCceEEEECCCCcccchhHH----HHHhhhHHHhcC-CeEEEEcCCCCCCCCCCCc------
Confidence 6777766532 11389999996411111112 33345 666655 9999999999998864321
Q ss_pred cCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc-c---c--------cc
Q 004067 614 CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-Y---D--------TF 681 (776)
Q Consensus 614 ~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~-~---~--------~~ 681 (776)
.....+++.+.+..+++.. +.+++.|+||||||.+++.+|.++|++++++|+.++...... + . ..
T Consensus 86 -~~~~~~~~~~~l~~~l~~l--~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (289)
T 1u2e_A 86 -SGSRSDLNARILKSVVDQL--DIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQL 162 (289)
T ss_dssp -SSCHHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHH
T ss_pred -cccCHHHHHHHHHHHHHHh--CCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHH
Confidence 0233556666665555543 346899999999999999999999999999998877542100 0 0 00
Q ss_pred c-----------cccccCCCCCC-cc----ch----------------------hcCChhhhhccCCCcEEEEecCCCCc
Q 004067 682 Y-----------TEKYMGLPSED-PV----GY----------------------EYSSVMHHVHKMKGKLLLVHGMIDEN 723 (776)
Q Consensus 682 ~-----------~~~~~~~~~~~-~~----~~----------------------~~~~~~~~~~~i~~P~lii~G~~D~~ 723 (776)
+ .......+... .. .+ ...+....+.++++|+|+++|++|..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 242 (289)
T 1u2e_A 163 YRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRF 242 (289)
T ss_dssp HHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSS
T ss_pred HhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCc
Confidence 0 00000001000 00 00 00112245678889999999999999
Q ss_pred cChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 724 VHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 724 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
+|+..+..+.+.+ .+.++++++++||.. ..+.++++.+.+.+||.+
T Consensus 243 ~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 243 VPMDAGLRLLSGI----AGSELHIFRDCGHWA-QWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp SCTHHHHHHHHHS----TTCEEEEESSCCSCH-HHHTHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHhhC----CCcEEEEeCCCCCch-hhcCHHHHHHHHHHHhcC
Confidence 9999888887765 457899999999986 455688899999999864
No 201
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.73 E-value=3.8e-15 Score=159.13 Aligned_cols=300 Identities=13% Similarity=0.065 Sum_probs=182.8
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++||.... ..+.+|++.+++.......... ....+ ..+...........+....|+|
T Consensus 67 V~~v~fspdg~~la~g~~------~~v~i~~~~~g~~~~~l~~~~~----~~~~~-~~~~~~~~~~~~~~v~~v~~s~-- 133 (393)
T 1erj_A 67 VCCVKFSNDGEYLATGCN------KTTQVYRVSDGSLVARLSDDSA----ANKDP-ENLNTSSSPSSDLYIRSVCFSP-- 133 (393)
T ss_dssp CCEEEECTTSSEEEEECB------SCEEEEETTTCCEEEEECC----------------------CCCCBEEEEEECT--
T ss_pred EEEEEECCCCCEEEEEcC------CcEEEEEecCCCEEEEecCccc----ccccc-ccccccccCCCceeEEEEEECC--
Confidence 578999999999997432 3588999988876443321110 00000 0000000000112377899999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCce
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTV 214 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~ 214 (776)
||++|+.. .++.|.+||+.+++....+..+.. .+..+.|+|||+.|+..+. +.|.+||+.+++..........
T Consensus 134 -dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~--- 208 (393)
T 1erj_A 134 -DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ-DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG--- 208 (393)
T ss_dssp -TSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC---
T ss_pred -CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCC-CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCC---
Confidence 99999976 688999999999887634544433 4888999999999988775 5799999999876543332211
Q ss_pred ecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 215 THGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
+..++|+| ||+.|+..+.+ ..|.+||+.
T Consensus 209 ---------------v~~~~~~~~~~~~l~~~s~d------------------------------------~~v~iwd~~ 237 (393)
T 1erj_A 209 ---------------VTTVAVSPGDGKYIAAGSLD------------------------------------RAVRVWDSE 237 (393)
T ss_dssp ---------------EEEEEECSTTCCEEEEEETT------------------------------------SCEEEEETT
T ss_pred ---------------cEEEEEECCCCCEEEEEcCC------------------------------------CcEEEEECC
Confidence 34678999 88888876643 237899998
Q ss_pred CCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE-------------EEEEeccC
Q 004067 294 GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK-------------VILVEELD 360 (776)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~-------------~l~~~~~~ 360 (776)
+++....... .......+...+..++|+|||+.|+..+ .+..|.+||+.++... .+..+...
T Consensus 238 ~~~~~~~~~~-~~~~~~~h~~~v~~v~~~~~g~~l~s~s----~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 312 (393)
T 1erj_A 238 TGFLVERLDS-ENESGTGHKDSVYSVVFTRDGQSVVSGS----LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 312 (393)
T ss_dssp TCCEEEEEC-------CCCSSCEEEEEECTTSSEEEEEE----TTSEEEEEEC---------------CEEEEEECCSSC
T ss_pred CCcEEEeecc-cccCCCCCCCCEEEEEECCCCCEEEEEe----CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCc
Confidence 8875432110 0001134567789999999999887665 4556999998764321 11111111
Q ss_pred ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEEEEEeecC------CCcEEEEEEc
Q 004067 361 SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNE------ASGQVYFTGT 433 (776)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~------dg~~i~~~~~ 433 (776)
... -.|++ ++.++++...+| .|++||+.+++. ..+..+...+..+. |++ +++ +++++.
T Consensus 313 v~~---~~~~~--------~~~~l~sgs~D~--~v~iwd~~~~~~~~~l~~h~~~v~~v~-~~~~~~~~p~~~-~l~sgs 377 (393)
T 1erj_A 313 VLS---VATTQ--------NDEYILSGSKDR--GVLFWDKKSGNPLLMLQGHRNSVISVA-VANGSSLGPEYN-VFATGS 377 (393)
T ss_dssp EEE---EEECG--------GGCEEEEEETTS--EEEEEETTTCCEEEEEECCSSCEEEEE-ECSSCTTCTTCE-EEEEEE
T ss_pred EEE---EEECC--------CCCEEEEEeCCC--eEEEEECCCCeEEEEECCCCCCEEEEE-ecCCcCcCCCCC-EEEEEC
Confidence 110 01112 234556666677 899999876654 44555555565554 554 566 455555
Q ss_pred cCCCceeeEEEEEe
Q 004067 434 LDGPLESHLYCAKL 447 (776)
Q Consensus 434 ~~~~~~~~l~~~~~ 447 (776)
.++. +.||.+.-
T Consensus 378 ~Dg~--i~iW~~~~ 389 (393)
T 1erj_A 378 GDCK--ARIWKYKK 389 (393)
T ss_dssp TTSE--EEEEEEEE
T ss_pred CCCc--EEECcccc
Confidence 5543 88998864
No 202
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.73 E-value=8.3e-18 Score=175.32 Aligned_cols=209 Identities=15% Similarity=0.108 Sum_probs=140.5
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhc
Q 004067 534 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHN 613 (776)
Q Consensus 534 g~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~ 613 (776)
+..+.+..+.+. .|+||++||.+++.. .| ...+...||.|+++|+||+|.+.....
T Consensus 69 ~~~~~~~~~g~~--------~~~vv~~hG~~~~~~-------~~---~~~~~~lg~~Vi~~D~~G~G~S~~~~~------ 124 (330)
T 3p2m_A 69 AGAISALRWGGS--------APRVIFLHGGGQNAH-------TW---DTVIVGLGEPALAVDLPGHGHSAWRED------ 124 (330)
T ss_dssp ETTEEEEEESSS--------CCSEEEECCTTCCGG-------GG---HHHHHHSCCCEEEECCTTSTTSCCCSS------
T ss_pred CceEEEEEeCCC--------CCeEEEECCCCCccc-------hH---HHHHHHcCCeEEEEcCCCCCCCCCCCC------
Confidence 444777777542 268999999876543 23 233444599999999999998863211
Q ss_pred cCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc----------------
Q 004067 614 CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---------------- 677 (776)
Q Consensus 614 ~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------- 677 (776)
.....+++.+.+..+++.. +.+++.|+||||||.+++.+|.++|++++++|+.+|......
T Consensus 125 -~~~~~~~~a~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (330)
T 3p2m_A 125 -GNYSPQLNSETLAPVLREL--APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALM 201 (330)
T ss_dssp -CBCCHHHHHHHHHHHHHHS--STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC--------
T ss_pred -CCCCHHHHHHHHHHHHHHh--CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhh
Confidence 2234566666666665543 346899999999999999999999999999999987532100
Q ss_pred --------ccccccccccCCCCCCc-----------------------cchhcC----ChhhhhccCCCcEEEEecCCCC
Q 004067 678 --------YDTFYTEKYMGLPSEDP-----------------------VGYEYS----SVMHHVHKMKGKLLLVHGMIDE 722 (776)
Q Consensus 678 --------~~~~~~~~~~~~~~~~~-----------------------~~~~~~----~~~~~~~~i~~P~lii~G~~D~ 722 (776)
+...+.......+.... ..+... .....+.++++|+|+++|++|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ 281 (330)
T 3p2m_A 202 HGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSG 281 (330)
T ss_dssp ---CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCC
T ss_pred cCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCC
Confidence 00000000000000000 000000 1123567889999999999999
Q ss_pred ccChHHHHHHHHHHHHCCCCeE-EEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 723 NVHFRHTARLINALVAARKPYE-ILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 723 ~v~~~~~~~~~~~l~~~~~~~~-~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
.+++..+..+.+.+ .+.+ +++++++||.+ ..+..+++.+.+.+||++
T Consensus 282 ~v~~~~~~~l~~~~----~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 282 FVTDQDTAELHRRA----THFRGVHIVEKSGHSV-QSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp SSCHHHHHHHHHHC----SSEEEEEEETTCCSCH-HHHCHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhC----CCCeeEEEeCCCCCCc-chhCHHHHHHHHHHHHhc
Confidence 99998888877765 5567 99999999987 556788899999999875
No 203
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.73 E-value=8e-17 Score=162.64 Aligned_cols=202 Identities=17% Similarity=0.096 Sum_probs=134.1
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 633 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 633 (776)
.|.||++||.+++.. .|...+..|++.||.|+++|+||+|.|..... ..+.++++.+.+..+++.-
T Consensus 4 ~~~vvllHG~~~~~~-------~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l 69 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW-------SWYKLKPLLEAAGHKVTALDLAASGTDLRKIE-------ELRTLYDYTLPLMELMESL 69 (273)
T ss_dssp CCEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGG-------GCCSHHHHHHHHHHHHHTS
T ss_pred CCeEEEECCCCCCcc-------hHHHHHHHHHhCCCEEEEecCCCCCCCccCcc-------cccCHHHHHHHHHHHHHHh
Confidence 368999999875543 34556788988999999999999998864211 1123566666666565543
Q ss_pred CCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc---------cccc-----cccc---ccCCCCC----
Q 004067 634 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---------YDTF-----YTEK---YMGLPSE---- 692 (776)
Q Consensus 634 ~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------~~~~-----~~~~---~~~~~~~---- 692 (776)
. ..+++.|+||||||++++.++.++|++++++|+.++...... +... +... ....+..
T Consensus 70 ~-~~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (273)
T 1xkl_A 70 S-ADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTS 148 (273)
T ss_dssp C-SSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEE
T ss_pred c-cCCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccc
Confidence 2 136899999999999999999999999999998876421100 0000 0000 0000000
Q ss_pred ---Cccc-----h--------------hcCC-----------hhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHC
Q 004067 693 ---DPVG-----Y--------------EYSS-----------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA 739 (776)
Q Consensus 693 ---~~~~-----~--------------~~~~-----------~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~ 739 (776)
.... + .... .+......++|+|+++|++|..+|+..++.+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~--- 225 (273)
T 1xkl_A 149 MFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--- 225 (273)
T ss_dssp EECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH---
T ss_pred cccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhC---
Confidence 0000 0 0000 00000013579999999999999999888887776
Q ss_pred CCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 740 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 740 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
.+.+++++|++||.. ..+.++++.+.+.+|+++.
T Consensus 226 -p~~~~~~i~~aGH~~-~~e~P~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 226 -GVTEAIEIKGADHMA-MLCEPQKLCASLLEIAHKY 259 (273)
T ss_dssp -CCSEEEEETTCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred -CCCeEEEeCCCCCCc-hhcCHHHHHHHHHHHHHHh
Confidence 456899999999987 6677899999999999764
No 204
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.6e-17 Score=176.43 Aligned_cols=297 Identities=10% Similarity=0.066 Sum_probs=179.9
Q ss_pred CCceeEcCCCCEEEEEeCCCC------cCcceEEEEecCCCceE-EeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeee
Q 004067 57 PTSIGFSPDDNLITYLLSPDH------SLSRKVFSFDPKTCKQE-LVFSPPDGGLDENNISPEEKLRRERLRERGLGVTR 129 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~------~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 129 (776)
+..++|||||+.+.+.....+ .....|++|++.+++.. .+... .+...+..
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~----------------------~~~~~v~~ 72 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL----------------------QVDSKFND 72 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC----------------------CCSSCEEE
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE----------------------ecCCceEE
Confidence 378899999995555542222 23457999999987632 11110 01246889
Q ss_pred EEEeecCCCceEEEEe-CCCcEEEEeCCC----CccceecCCCCCCCccCceeCCC-CCEEEEEE-CCcEEEEecCCCc-
Q 004067 130 YEWVKTSSKKKIIMVP-LPDGIYFQDLSC----SKPELKLSSSSCSPVIDPHLSSD-GTMIAFVR-DCELHVLNLLINE- 201 (776)
Q Consensus 130 ~~~sp~~~dg~~l~~~-~~~~l~~~d~~~----~~~~~~l~~~~~~~~~~~~~SpD-g~~la~~~-~~~l~~~~l~~g~- 201 (776)
+.|+| ||+.|+.. .++.|.+||+.+ .+....+..... .+..+.|+|| ++.|+... ++.|++|++.+++
T Consensus 73 ~~~s~---~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 148 (416)
T 2pm9_A 73 LDWSH---NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSS-SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTE 148 (416)
T ss_dssp EEECS---SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSS-CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSS
T ss_pred EEECC---CCCeEEEEccCCeEEEeecccccccccchhhccCCcc-ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 99999 99999986 678999999987 223324444433 4888999999 66666655 3579999999876
Q ss_pred -----eeEEeeCCCCCceecCCcccceecccCCcceEEECCCC-CeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecC
Q 004067 202 -----QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDS-KFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 275 (776)
Q Consensus 202 -----~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (776)
........ ......+..+.|+||+ +.|+....+
T Consensus 149 ~~~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~l~~~~~d--------------------------- 187 (416)
T 2pm9_A 149 SPSNYTPLTPGQS--------------MSSVDEVISLAWNQSLAHVFASAGSS--------------------------- 187 (416)
T ss_dssp CTTTCCCBCCCCS--------------CCSSCCCCEEEECSSCTTEEEEESSS---------------------------
T ss_pred ccccccccccccc--------------cCCCCCeeEEEeCCCCCcEEEEEcCC---------------------------
Confidence 21111000 0011125688999995 555443322
Q ss_pred CCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCCCc-eE-
Q 004067 276 PFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQ-RK- 352 (776)
Q Consensus 276 ~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~g~-~~- 352 (776)
..|.+||+.+++......... ....+...+..++|+|||. .++.... +.....|.+||+.++. ..
T Consensus 188 ---------g~v~iwd~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~~~i~~~d~~~~~~~~~ 255 (416)
T 2pm9_A 188 ---------NFASIWDLKAKKEVIHLSYTS--PNSGIKQQLSVVEWHPKNSTRVATATG-SDNDPSILIWDLRNANTPLQ 255 (416)
T ss_dssp ---------SCEEEEETTTTEEEEEECCCC--CSSCCCCCEEEEEECSSCTTEEEEEEC-CSSSCCCCEEETTSTTSCSB
T ss_pred ---------CCEEEEECCCCCcceEEeccc--cccccCCceEEEEECCCCCCEEEEEEC-CCCCceEEEEeCCCCCCCcE
Confidence 347999999887544322100 0011256789999999985 5555542 2222369999998863 22
Q ss_pred EEE-EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEE
Q 004067 353 VIL-VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYF 430 (776)
Q Consensus 353 ~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~ 430 (776)
.+. .+...... -.|+| .++.++++...+| .|++|++..++ ...+..+...+..+. |+|++..+++
T Consensus 256 ~~~~~~~~~v~~---~~~s~-------~~~~~l~s~~~dg--~v~~wd~~~~~~~~~~~~~~~~v~~~~-~s~~~~~~l~ 322 (416)
T 2pm9_A 256 TLNQGHQKGILS---LDWCH-------QDEHLLLSSGRDN--TVLLWNPESAEQLSQFPARGNWCFKTK-FAPEAPDLFA 322 (416)
T ss_dssp CCCSCCSSCEEE---EEECS-------SCSSCEEEEESSS--EEEEECSSSCCEEEEEECSSSCCCCEE-ECTTCTTEEE
T ss_pred EeecCccCceeE---EEeCC-------CCCCeEEEEeCCC--CEEEeeCCCCccceeecCCCCceEEEE-ECCCCCCEEE
Confidence 222 22222111 11222 1344666666677 89999987665 445555555555554 9999944566
Q ss_pred EEccCCCceeeEEEEEe
Q 004067 431 TGTLDGPLESHLYCAKL 447 (776)
Q Consensus 431 ~~~~~~~~~~~l~~~~~ 447 (776)
++..++ .+.+|.+.-
T Consensus 323 s~~~d~--~i~iw~~~~ 337 (416)
T 2pm9_A 323 CASFDN--KIEVQTLQN 337 (416)
T ss_dssp ECCSSS--EEEEEESCC
T ss_pred EEecCC--cEEEEEccC
Confidence 665554 377887763
No 205
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.73 E-value=3.8e-17 Score=167.99 Aligned_cols=225 Identities=12% Similarity=0.050 Sum_probs=141.4
Q ss_pred CceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 004067 523 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 602 (776)
Q Consensus 523 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~ 602 (776)
..+...+.. +|.++++.... +.|+||++||.+++.. .|..++..|.+ ||.|+++|+||+|.+
T Consensus 12 ~~~~~~~~~-~g~~l~~~~~g---------~~~~vv~lHG~~~~~~-------~~~~~~~~l~~-~~~v~~~D~~G~G~S 73 (306)
T 3r40_A 12 GFGSEWINT-SSGRIFARVGG---------DGPPLLLLHGFPQTHV-------MWHRVAPKLAE-RFKVIVADLPGYGWS 73 (306)
T ss_dssp TCEEEEECC-TTCCEEEEEEE---------CSSEEEEECCTTCCGG-------GGGGTHHHHHT-TSEEEEECCTTSTTS
T ss_pred CCceEEEEe-CCEEEEEEEcC---------CCCeEEEECCCCCCHH-------HHHHHHHHhcc-CCeEEEeCCCCCCCC
Confidence 344444444 78888888764 2268999999877654 24455777877 999999999999988
Q ss_pred chhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccc--
Q 004067 603 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT-- 680 (776)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~-- 680 (776)
........ ......+++.+.+..+++.. +.+++.++||||||.+++.+|.++|++++++|+.++.........
T Consensus 74 ~~~~~~~~---~~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 148 (306)
T 3r40_A 74 DMPESDEQ---HTPYTKRAMAKQLIEAMEQL--GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMN 148 (306)
T ss_dssp CCCCCCTT---CGGGSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCS
T ss_pred CCCCCCcc---cCCCCHHHHHHHHHHHHHHh--CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhh
Confidence 64322100 00223566666666665543 446899999999999999999999999999999987543110000
Q ss_pred -----------------------------cccc----cccCC--CC-CCccc---hhc--CC------------------
Q 004067 681 -----------------------------FYTE----KYMGL--PS-EDPVG---YEY--SS------------------ 701 (776)
Q Consensus 681 -----------------------------~~~~----~~~~~--~~-~~~~~---~~~--~~------------------ 701 (776)
.+.. .+... .. ..... +.. ..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (306)
T 3r40_A 149 RAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYAD 228 (306)
T ss_dssp HHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHH
T ss_pred hhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhccccc
Confidence 0000 00000 00 00000 000 00
Q ss_pred ------hhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 702 ------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 702 ------~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
....+.++++|+|+++|++|.++++....+..+.+ ..+.+++++ ++||.+ ..+.++++.+.+.+||++.
T Consensus 229 ~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~-~~gH~~-~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 229 FEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKW---ASDVQGAPI-ESGHFL-PEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp HHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHH---BSSEEEEEE-SSCSCH-HHHSHHHHHHHHHHHHHC-
T ss_pred chhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhh---cCCCeEEEe-cCCcCc-hhhChHHHHHHHHHHHHhc
Confidence 00024788899999999999999855444444444 356788888 679976 5677889999999999864
No 206
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.73 E-value=2.2e-15 Score=158.43 Aligned_cols=280 Identities=6% Similarity=-0.009 Sum_probs=176.3
Q ss_pred CeeeEEEeecCCCceEEEEeC--------CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEE
Q 004067 126 GVTRYEWVKTSSKKKIIMVPL--------PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVL 195 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~~--------~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~ 195 (776)
+...+.|+| ||++|++.. ++.|++||+.+++....+.... ....+.|+|||+.+++... +.|+++
T Consensus 42 ~~~~~~~s~---dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 42 GAYEMAYSQ---QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp SEEEEEEET---TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred CccceEECC---CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecCCCEEEEE
Confidence 567789999 999998875 4579999999988763443322 3677899999998877765 579999
Q ss_pred ecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecC
Q 004067 196 NLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 275 (776)
Q Consensus 196 ~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (776)
|+++++.......+.......+.+ .-...+.|+|||+.|++......
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~s~dg~~l~~~~~~~~------------------------- 163 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRP--------LQPRELVADDATNTVYISGIGKE------------------------- 163 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCC--------CEEEEEEEETTTTEEEEEEESSS-------------------------
T ss_pred eCCCCeeEEEEecCCCccccccCC--------CCCceEEECCCCCEEEEEecCCC-------------------------
Confidence 999998755443322100000000 00236789999998876652111
Q ss_pred CCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEE
Q 004067 276 PFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 355 (776)
Q Consensus 276 ~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~ 355 (776)
..|++||+++++...... ........+.|+|||+.+++.. ....|++||+++++.....
T Consensus 164 ---------~~i~~~d~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~~----~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 164 ---------SVIWVVDGGNIKLKTAIQ--------NTGKMSTGLALDSEGKRLYTTN----ADGELITIDTADNKILSRK 222 (353)
T ss_dssp ---------CEEEEEETTTTEEEEEEC--------CCCTTCCCCEEETTTTEEEEEC----TTSEEEEEETTTTEEEEEE
T ss_pred ---------ceEEEEcCCCCceEEEec--------CCCCccceEEECCCCCEEEEEc----CCCeEEEEECCCCeEEEEE
Confidence 458999999887655421 1222345689999999777664 2346899999998875544
Q ss_pred EeccC--ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEEEEEeecCCCcEEEEEE
Q 004067 356 VEELD--SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTG 432 (776)
Q Consensus 356 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~dg~~i~~~~ 432 (776)
..... ......-.|+| +++.+++....++ .|++||+.+++. ..+..+.. .. ..|++||+++|+..
T Consensus 223 ~~~~~~~~~~~~~~~~s~-------dg~~l~~~~~~~~--~v~~~d~~~~~~~~~~~~~~~--~~-~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDT-------ARQRAFITDSKAA--EVLVVDTRNGNILAKVAAPES--LA-VLFNPARNEAYVTH 290 (353)
T ss_dssp ECCCSSSCCCEEEEEEET-------TTTEEEEEESSSS--EEEEEETTTCCEEEEEECSSC--CC-EEEETTTTEEEEEE
T ss_pred EcCCCCCCcccceEEECC-------CCCEEEEEeCCCC--EEEEEECCCCcEEEEEEcCCC--ce-EEECCCCCEEEEEE
Confidence 32111 00000011222 2333444443334 899999877654 33333321 22 35899999988877
Q ss_pred ccCCCceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeC
Q 004067 433 TLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDS 485 (776)
Q Consensus 433 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~ 485 (776)
..++ .|+.+++. .+. ....+........+.|+|||++|++....
T Consensus 291 ~~~~----~v~~~d~~-~~~----~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 291 RQAG----KVSVIDAK-SYK----VVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTTT----EEEEEETT-TTE----EEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred CCCC----eEEEEECC-CCe----EEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 5543 46666663 232 34455555556788999999988887665
No 207
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.73 E-value=6.9e-17 Score=165.24 Aligned_cols=213 Identities=11% Similarity=0.012 Sum_probs=137.1
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.+|..+++.... + .|.||++||.+++.. .|...+..|++. |.|+++|+||+|.|... ..
T Consensus 16 ~~g~~l~y~~~G--~-------g~~lvllHG~~~~~~-------~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~--- 74 (294)
T 1ehy_A 16 LPDVKIHYVREG--A-------GPTLLLLHGWPGFWW-------EWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-DL--- 74 (294)
T ss_dssp CSSCEEEEEEEE--C-------SSEEEEECCSSCCGG-------GGHHHHHHHHTT-SEEEEECCTTSTTSCCC-CT---
T ss_pred ECCEEEEEEEcC--C-------CCEEEEECCCCcchh-------hHHHHHHHHhhc-CEEEecCCCCCCCCCCC-cc---
Confidence 478888887654 1 267999999876643 345567778776 99999999999998753 10
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC-Ccc--c---------c-
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT-SWD--G---------Y- 678 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~-~~~--~---------~- 678 (776)
.....+.++++.+.+..++++- ..+++.|+||||||.+++.+|.++|++++++|+.++.. ... . +
T Consensus 75 ~~~~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 152 (294)
T 1ehy_A 75 NDLSKYSLDKAADDQAALLDAL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWY 152 (294)
T ss_dssp TCGGGGCHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHH
T ss_pred ccccCcCHHHHHHHHHHHHHHc--CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceE
Confidence 0000123556666666555543 34589999999999999999999999999999988532 110 0 0
Q ss_pred ---c----------------ccccccc----cCCCCC-Cc---cchhc----C---------------Chh-----hhhc
Q 004067 679 ---D----------------TFYTEKY----MGLPSE-DP---VGYEY----S---------------SVM-----HHVH 707 (776)
Q Consensus 679 ---~----------------~~~~~~~----~~~~~~-~~---~~~~~----~---------------~~~-----~~~~ 707 (776)
. ..+...+ ...+.. .. ..+.. . ... ..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (294)
T 1ehy_A 153 SQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHT 232 (294)
T ss_dssp HHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGS
T ss_pred EEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccC
Confidence 0 0000000 000000 00 00100 0 000 0123
Q ss_pred cCCCcEEEEecCCCCccCh-HHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 004067 708 KMKGKLLLVHGMIDENVHF-RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 772 (776)
Q Consensus 708 ~i~~P~lii~G~~D~~v~~-~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 772 (776)
++++|+|+++|++|..+++ .....+.+. -.+.++++++++||.. ..+.++++.+.+.+||
T Consensus 233 ~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 233 MSDLPVTMIWGLGDTCVPYAPLIEFVPKY----YSNYTMETIEDCGHFL-MVEKPEIAIDRIKTAF 293 (294)
T ss_dssp CBCSCEEEEEECCSSCCTTHHHHHHHHHH----BSSEEEEEETTCCSCH-HHHCHHHHHHHHHHHC
T ss_pred cCCCCEEEEEeCCCCCcchHHHHHHHHHH----cCCCceEEeCCCCCCh-hhhCHHHHHHHHHHHh
Confidence 7889999999999998884 444444443 3578999999999976 5667888899998886
No 208
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.73 E-value=3.1e-17 Score=169.61 Aligned_cols=213 Identities=13% Similarity=0.065 Sum_probs=143.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 612 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~ 612 (776)
+|..+++....+ ++.|.||++||.+++.. .|...+..|++. |.|+++|+||+|.|....
T Consensus 15 ~g~~l~y~~~G~-------g~~~pvvllHG~~~~~~-------~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~------ 73 (316)
T 3afi_E 15 LGSSMAYRETGA-------QDAPVVLFLHGNPTSSH-------IWRNILPLVSPV-AHCIAPDLIGFGQSGKPD------ 73 (316)
T ss_dssp TTEEEEEEEESC-------TTSCEEEEECCTTCCGG-------GGTTTHHHHTTT-SEEEEECCTTSTTSCCCS------
T ss_pred CCEEEEEEEeCC-------CCCCeEEEECCCCCchH-------HHHHHHHHHhhC-CEEEEECCCCCCCCCCCC------
Confidence 677888887653 12258999999877644 334456777654 999999999999986421
Q ss_pred ccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCC---ccccc----------
Q 004067 613 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGYD---------- 679 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~---~~~~~---------- 679 (776)
..+.++++.+.+..+++.- ..+++.|+||||||.+++.+|.++|++++++|+.++... +....
T Consensus 74 --~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (316)
T 3afi_E 74 --IAYRFFDHVRYLDAFIEQR--GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDH 149 (316)
T ss_dssp --SCCCHHHHHHHHHHHHHHT--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHH
T ss_pred --CCCCHHHHHHHHHHHHHHc--CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhcccccc
Confidence 1234666666666666553 346899999999999999999999999999998865321 11000
Q ss_pred -----c--------c-----------ccccccC---CCCCCc---cch-----------------hcCC-----------
Q 004067 680 -----T--------F-----------YTEKYMG---LPSEDP---VGY-----------------EYSS----------- 701 (776)
Q Consensus 680 -----~--------~-----------~~~~~~~---~~~~~~---~~~-----------------~~~~----------- 701 (776)
. . +...+.. ...... ..+ ....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (316)
T 3afi_E 150 AEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEA 229 (316)
T ss_dssp HHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHH
T ss_pred chhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhH
Confidence 0 0 0000000 000000 000 0000
Q ss_pred ---hhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 702 ---VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 702 ---~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
....+.++++|+|+++|++|..+++..+..+.+.+ .+.++++++++||.+ ..+.++++.+.+.+||.+.
T Consensus 230 ~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~GH~~-~~e~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 230 LQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASL----TRCALIRLGAGLHYL-QEDHADAIGRSVAGWIAGI 301 (316)
T ss_dssp HHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS----SSEEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhC----CCCeEEEcCCCCCCc-hhhCHHHHHHHHHHHHhhc
Confidence 01123468899999999999999988777776654 568999999999986 5667889999999999763
No 209
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.73 E-value=3.3e-17 Score=168.10 Aligned_cols=216 Identities=13% Similarity=-0.003 Sum_probs=141.9
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+...+. .+|..+++..+. ..|+||++||.+++.. .|..++..|++. |.|+++|+||+|.+.
T Consensus 10 ~~~~~~~-~~g~~l~~~~~g---------~~~~vv~lHG~~~~~~-------~~~~~~~~L~~~-~~vi~~D~~G~G~S~ 71 (301)
T 3kda_A 10 FESAYRE-VDGVKLHYVKGG---------QGPLVMLVHGFGQTWY-------EWHQLMPELAKR-FTVIAPDLPGLGQSE 71 (301)
T ss_dssp CEEEEEE-ETTEEEEEEEEE---------SSSEEEEECCTTCCGG-------GGTTTHHHHTTT-SEEEEECCTTSTTCC
T ss_pred cceEEEe-eCCeEEEEEEcC---------CCCEEEEECCCCcchh-------HHHHHHHHHHhc-CeEEEEcCCCCCCCC
Confidence 3444444 488889888775 1268999999877654 244457788887 999999999999886
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCc-EEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc-cc--
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-YD-- 679 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~-i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~-~~-- 679 (776)
... ....++++.+.+..+++.. +.++ +.++||||||.+++.++.++|++++++|+.+|...... ..
T Consensus 72 ~~~--------~~~~~~~~~~~l~~~l~~l--~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (301)
T 3kda_A 72 PPK--------TGYSGEQVAVYLHKLARQF--SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFP 141 (301)
T ss_dssp CCS--------SCSSHHHHHHHHHHHHHHH--CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSB
T ss_pred CCC--------CCccHHHHHHHHHHHHHHc--CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchh
Confidence 531 1234555655555555442 3346 99999999999999999999999999999887532100 00
Q ss_pred -------------------cccc------------ccc----cCCCC-CCcc---chh--cCC-----------------
Q 004067 680 -------------------TFYT------------EKY----MGLPS-EDPV---GYE--YSS----------------- 701 (776)
Q Consensus 680 -------------------~~~~------------~~~----~~~~~-~~~~---~~~--~~~----------------- 701 (776)
.... ..+ ...+. .... .+. ...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (301)
T 3kda_A 142 AFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNES 221 (301)
T ss_dssp SEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHH
T ss_pred hhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccc
Confidence 0000 000 00000 0000 000 000
Q ss_pred ------hhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 702 ------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 702 ------~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
....+.++++|+|+++|++| +++.....+.+ ...++++++++++||.+ ..+.++++.+.+.+|+++
T Consensus 222 ~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~----~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~~l~~ 293 (301)
T 3kda_A 222 VRQNAELAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKA----YAEDVEGHVLPGCGHWL-PEECAAPMNRLVIDFLSR 293 (301)
T ss_dssp HHHHHHHTTSCBCSCEEEEEECSTTS--CTTHHHHHHHT----TBSSEEEEEETTCCSCH-HHHTHHHHHHHHHHHHTT
T ss_pred hhhcccchhhccccCcceEEEecCCC--CChhHHHHHHh----hcccCeEEEcCCCCcCc-hhhCHHHHHHHHHHHHhh
Confidence 00012278899999999999 55555555433 34678999999999987 667889999999999875
No 210
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.73 E-value=3.2e-15 Score=156.32 Aligned_cols=276 Identities=12% Similarity=0.081 Sum_probs=184.1
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.|||||++|+-.+.+ ..|.+||+.+++........ ...+....|+|
T Consensus 58 v~~~~~s~d~~~l~s~s~D-----g~v~iWd~~~~~~~~~~~~~-----------------------~~~v~~~~~s~-- 107 (340)
T 1got_B 58 IYAMHWGTDSRLLLSASQD-----GKLIIWDSYTTNKVHAIPLR-----------------------SSWVMTCAYAP-- 107 (340)
T ss_dssp EEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECS-----------------------SSCEEEEEECT--
T ss_pred eEEEEECCCCCEEEEEeCC-----CcEEEEECCCCCcceEeecC-----------------------CccEEEEEECC--
Confidence 5789999999999865542 46999999887754333211 23578899999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccc----eecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCceeEEeeCCCC
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPE----LKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~----~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~~~~lt~~~~~ 211 (776)
||+.|+.. .++.+.+||+.+++.. ..+.... ..+....|+|+++.+.-..++.|.+||+.+++..........
T Consensus 108 -~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~ 185 (340)
T 1got_B 108 -SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG 185 (340)
T ss_dssp -TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCS-SCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred -CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCC-ccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCC
Confidence 99999876 7788999999876421 1233333 246778999998744333456899999998876543322111
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
.+..+.|+|||+.|+..+.+ ..|.+||
T Consensus 186 -----------------~v~~~~~~~~~~~l~sg~~d------------------------------------~~v~~wd 212 (340)
T 1got_B 186 -----------------DVMSLSLAPDTRLFVSGACD------------------------------------ASAKLWD 212 (340)
T ss_dssp -----------------CEEEEEECTTSSEEEEEETT------------------------------------SCEEEEE
T ss_pred -----------------ceEEEEECCCCCEEEEEeCC------------------------------------CcEEEEE
Confidence 14578899999988766543 2479999
Q ss_pred cCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeeccccccc
Q 004067 292 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTP 371 (776)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 371 (776)
+.+++....- ..+...+..++|+|||+.++..+ .+..|.+||+.++.......+.........-.|+|
T Consensus 213 ~~~~~~~~~~--------~~h~~~v~~v~~~p~~~~l~s~s----~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 213 VREGMCRQTF--------TGHESDINAICFFPNGNAFATGS----DDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp TTTCSEEEEE--------CCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred CCCCeeEEEE--------cCCcCCEEEEEEcCCCCEEEEEc----CCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 9888754431 45667799999999999887665 44569999998876544333221100000112333
Q ss_pred CCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEE
Q 004067 372 LDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 443 (776)
Q Consensus 372 ~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~ 443 (776)
++.++++...+| .|.+||...++ ...+..+...+..+. |++||+.|+. ++.++. +.||
T Consensus 281 --------~g~~l~~g~~d~--~i~vwd~~~~~~~~~~~~h~~~v~~~~-~s~dg~~l~s-~s~D~~--i~iW 339 (340)
T 1got_B 281 --------SGRLLLAGYDDF--NCNVWDALKADRAGVLAGHDNRVSCLG-VTDDGMAVAT-GSWDSF--LKIW 339 (340)
T ss_dssp --------TSSEEEEEETTS--EEEEEETTTCCEEEEEECCSSCEEEEE-ECTTSSCEEE-EETTSC--EEEE
T ss_pred --------CCCEEEEECCCC--eEEEEEcccCcEeeEeecCCCcEEEEE-EcCCCCEEEE-EcCCcc--EEec
Confidence 334666666677 89999976554 455666666666654 9999996554 444443 6777
No 211
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.72 E-value=3.1e-15 Score=165.92 Aligned_cols=346 Identities=11% Similarity=0.033 Sum_probs=208.0
Q ss_pred eEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCce
Q 004067 61 GFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKK 140 (776)
Q Consensus 61 ~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~ 140 (776)
.+||||+.++ +... ...|.+||.++++....... +..+....||| ||+
T Consensus 144 ~~~p~~~~~v--s~~~---d~~V~v~D~~t~~~~~~i~~------------------------g~~~~~v~~sp---dg~ 191 (543)
T 1nir_A 144 DLDLPNLFSV--TLRD---AGQIALVDGDSKKIVKVIDT------------------------GYAVHISRMSA---SGR 191 (543)
T ss_dssp CCCGGGEEEE--EEGG---GTEEEEEETTTCCEEEEEEC------------------------STTEEEEEECT---TSC
T ss_pred ccCCCCEEEE--EEcC---CCeEEEEECCCceEEEEEec------------------------CcccceEEECC---CCC
Confidence 5899986443 3222 35799999999987544421 12366788999 999
Q ss_pred EEEEe-CCCcEEEEeC--CCCccceecCCCCCCCccCceeCC----CCCEEEEEE--CCcEEEEecCCCceeEEeeCCCC
Q 004067 141 IIMVP-LPDGIYFQDL--SCSKPELKLSSSSCSPVIDPHLSS----DGTMIAFVR--DCELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 141 ~l~~~-~~~~l~~~d~--~~~~~~~~l~~~~~~~~~~~~~Sp----Dg~~la~~~--~~~l~~~~l~~g~~~~lt~~~~~ 211 (776)
+|+.. .++.|.+||+ .+++....+..+. ....++||| ||++|+... ++.|.++|..+++..+.......
T Consensus 192 ~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~--~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~ 269 (543)
T 1nir_A 192 YLLVIGRDARIDMIDLWAKEPTKVAEIKIGI--EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGM 269 (543)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEEECCS--EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEE
T ss_pred EEEEECCCCeEEEEECcCCCCcEEEEEecCC--CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCc
Confidence 99876 6688999999 6766553444322 367889999 999987765 46799999999887655432110
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
. ..+ ..+. .-.++.++.+|||++.+++..... ..|.+||
T Consensus 270 ~--~~~-~~~~---~~~~v~~i~~s~~~~~~~vs~~~~-----------------------------------g~i~vvd 308 (543)
T 1nir_A 270 T--VDT-QTYH---PEPRVAAIIASHEHPEFIVNVKET-----------------------------------GKVLLVN 308 (543)
T ss_dssp C--SSS-CCEE---SCCCEEEEEECSSSSEEEEEETTT-----------------------------------TEEEEEE
T ss_pred c--cCc-cccc---cCCceEEEEECCCCCEEEEEECCC-----------------------------------CeEEEEE
Confidence 0 000 0000 001245788999999876544211 3578899
Q ss_pred cCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec-cCceeecccccc
Q 004067 292 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFT 370 (776)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~ 370 (776)
..+++...+.. ........++.|+|||++++...+. ...|.+||+++++........ .+.
T Consensus 309 ~~~~~~l~~~~-------i~~~~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg~l~~~i~~g~~ph--------- 369 (543)
T 1nir_A 309 YKDIDNLTVTS-------IGAAPFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDRRLSALVDVGKTPH--------- 369 (543)
T ss_dssp CTTSSSCEEEE-------EECCSSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTTEEEEEEECSSSBC---------
T ss_pred ecCCCcceeEE-------eccCcCccCceECCCCCEEEEEecC---CCeEEEEECCCCeEEEeeccCCCCC---------
Confidence 88765322211 1122345568999999977655432 335888999999865544311 000
Q ss_pred cCCCCccc-c-CCeEEEEeccCCceEEEEEeCCC-------ce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCc--
Q 004067 371 PLDKGVTK-Y-SGGFIWASEKTGFRHLYLHDING-------TC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL-- 438 (776)
Q Consensus 371 ~~~~~~~~-~-~~~~~~~s~~~g~~~l~~~~~~g-------~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~-- 438 (776)
+ +.+..+ + +++.+|.+...+...|.+|+.++ .+ .+.|..+...+. ++.++|||++||....-. +.
T Consensus 370 ~-g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~-~v~~~pdg~~l~v~~~~~-~~~~ 446 (543)
T 1nir_A 370 P-GRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSL-FIKTHPKSSHLYVDTTFN-PDAR 446 (543)
T ss_dssp C-TTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC-CEECCTTCCEEEECCTTC-SSHH
T ss_pred C-CCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCce-EEEcCCCCCcEEEecCCC-CCcc
Confidence 0 001011 1 22444555443444899999875 33 445554332222 244899999988876311 10
Q ss_pred -eeeEEEEEeCCCCCCccccceee--------cC-CCCeEEEEEcCCcCEEEEEeeCC-CCCCEEEEEEcCCCceeEeec
Q 004067 439 -ESHLYCAKLYPDWNHTLEAPVKL--------TN-GKGKHVAVLDHNMRNFVDFHDSL-DSPPRILLCSLQDGSLVLPLY 507 (776)
Q Consensus 439 -~~~l~~~~~~~~g~~~~~~~~~l--------~~-~~~~~~~~~spdg~~l~~~~~~~-~~~~~i~~~~~~~~~~~~~l~ 507 (776)
...|..+++. .++ ...+.| +. ...+..+.|+|||+.+.+...+. .....|.++|..+++..+.+.
T Consensus 447 ~~~~v~v~d~~-~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 447 ISQSVAVFDLK-NLD---AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp HHTCEEEEETT-CTT---SCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred cCceEEEEECC-CCC---CCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 1234444542 232 111333 22 22366789999999999886532 334689999999998766654
No 212
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=3.8e-15 Score=172.20 Aligned_cols=256 Identities=16% Similarity=0.100 Sum_probs=167.5
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
..+++|||||++|||.+...|....+||++|+++|+..+++.. ...+..+.|||
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~------------------------~~~~~~~~wsp-- 180 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE------------------------RVKFSCMAWTH-- 180 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE------------------------EECSCCEEECT--
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc------------------------CcccceEEEEe--
Confidence 4689999999999999987665445999999999998765421 11345789999
Q ss_pred CCceEEEEeC-C----------------CcEEEEeCCCCccce-ec-CCCC-CCCccCceeCCCCCEEEEEEC------C
Q 004067 137 SKKKIIMVPL-P----------------DGIYFQDLSCSKPEL-KL-SSSS-CSPVIDPHLSSDGTMIAFVRD------C 190 (776)
Q Consensus 137 ~dg~~l~~~~-~----------------~~l~~~d~~~~~~~~-~l-~~~~-~~~~~~~~~SpDg~~la~~~~------~ 190 (776)
||+.|+|.. + .+||++++.+++... .+ +... ......+.|||||++|++.+. .
T Consensus 181 -Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 259 (710)
T 2xdw_A 181 -DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVN 259 (710)
T ss_dssp -TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCC
T ss_pred -CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCcc
Confidence 999999973 2 239999999887431 22 2211 112457899999999999873 4
Q ss_pred cEEEEecCC------C--ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCC
Q 004067 191 ELHVLNLLI------N--EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGK 262 (776)
Q Consensus 191 ~l~~~~l~~------g--~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 262 (776)
+||++++++ + ..++|+..... ....|+|||+.|+|.+....
T Consensus 260 ~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~~~s~dg~~l~~~s~~~~------------ 308 (710)
T 2xdw_A 260 RLWYCDLQQESNGITGILKWVKLIDNFEG-------------------EYDYVTNEGTVFTFKTNRHS------------ 308 (710)
T ss_dssp EEEEEEGGGSSSSSCSSCCCEEEECSSSS-------------------CEEEEEEETTEEEEEECTTC------------
T ss_pred EEEEEECcccccccCCccceEEeeCCCCc-------------------EEEEEeccCCEEEEEECCCC------------
Confidence 799999987 6 46666643321 12358999999999874321
Q ss_pred CCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCc---eEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceE
Q 004067 263 SSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP---VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKL 339 (776)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 339 (776)
....|+++|+++++ .+.+... .....+..+.|++++++++.. .++ ...
T Consensus 309 --------------------~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~lv~~~-~~~-g~~ 359 (710)
T 2xdw_A 309 --------------------PNYRLINIDFTDPEESKWKVLVPE-------HEKDVLEWVACVRSNFLVLCY-LHD-VKN 359 (710)
T ss_dssp --------------------TTCEEEEEETTSCCGGGCEEEECC-------CSSCEEEEEEEETTTEEEEEE-EET-TEE
T ss_pred --------------------CCCEEEEEeCCCCCcccceeccCC-------CCCCeEEEEEEEcCCEEEEEE-EEC-CEE
Confidence 12568999998875 2444221 112367789999777644443 333 466
Q ss_pred EEEEEECCCCc-eEEEEEeccCceeecccccccCCCCccccCCeEEEEe-ccCCceEEEEEeCCCce--eeccc
Q 004067 340 KVLKFDIKTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWAS-EKTGFRHLYLHDINGTC--LGPIT 409 (776)
Q Consensus 340 ~l~~~d~~~g~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~g~~~l~~~~~~g~~--~~~lt 409 (776)
.|+++|+.+|+ .+.+..+ ...+.. ..+ +.+++.+++.. +......||++|+.+++ .+.+.
T Consensus 360 ~l~~~~~~~g~~~~~l~~~--~~~v~~-~~~-------s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~ 423 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFPLE--VGSVVG-YSG-------QKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFR 423 (710)
T ss_dssp EEEEEETTTCCEEEEECCC--SSEEEE-EEC-------CTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEE
T ss_pred EEEEEECCCCCEEEecCCC--CceEEE-Eec-------CCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEee
Confidence 79999996665 4555432 111110 011 12344565553 33344599999998876 44443
No 213
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.72 E-value=3.5e-16 Score=163.44 Aligned_cols=287 Identities=9% Similarity=-0.024 Sum_probs=177.3
Q ss_pred CeeeEEEeecCCCceEEEEeCCCcEEEEe-------CCCCccce----ecCCCCCCCccCceeCCCCCEEEEEECCcEEE
Q 004067 126 GVTRYEWVKTSSKKKIIMVPLPDGIYFQD-------LSCSKPEL----KLSSSSCSPVIDPHLSSDGTMIAFVRDCELHV 194 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~~~~~l~~~d-------~~~~~~~~----~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~ 194 (776)
.+....|+| ||+.|+...+..+.+|| ........ .....+. .+..++||||++.++-..++.|.+
T Consensus 32 ~v~~~~fs~---dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~d~~l~~~s~dg~v~l 107 (344)
T 4gqb_B 32 QLEAARYRS---DGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEA-GVADLTWVGERGILVASDSGAVEL 107 (344)
T ss_dssp EEEEEEECT---TSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESS-CEEEEEEETTTEEEEEETTSEEEE
T ss_pred CEEEEEECC---CCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCC-CEEEEEEeCCCeEEEEECCCEEEE
Confidence 467889999 99999877554433333 21111100 0001112 367799999975443333567999
Q ss_pred EecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 195 LNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 195 ~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
||+++++........ ..+.. ..+..++|+|||+.|+..+.+
T Consensus 108 Wd~~~~~~~~~~~~~-----~~~H~--------~~V~~v~~spdg~~l~sgs~d-------------------------- 148 (344)
T 4gqb_B 108 WELDENETLIVSKFC-----KYEHD--------DIVSTVSVLSSGTQAVSGSKD-------------------------- 148 (344)
T ss_dssp EEECTTSSCEEEEEE-----EECCS--------SCEEEEEECTTSSEEEEEETT--------------------------
T ss_pred EeccCCCceeEeecc-----ccCCC--------CCEEEEEECCCCCEEEEEeCC--------------------------
Confidence 999988654322100 00011 125578999999999877644
Q ss_pred CCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCCCceEE
Q 004067 275 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKV 353 (776)
Q Consensus 275 ~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~g~~~~ 353 (776)
..|.+||+.+++....- ..+...+..+.|+||++ +++..+ .+..|.+||+.+++...
T Consensus 149 ----------~~i~iwd~~~~~~~~~~--------~~h~~~V~~~~~~~~~~~~l~s~s----~D~~v~iwd~~~~~~~~ 206 (344)
T 4gqb_B 149 ----------ICIKVWDLAQQVVLSSY--------RAHAAQVTCVAASPHKDSVFLSCS----EDNRILLWDTRCPKPAS 206 (344)
T ss_dssp ----------SCEEEEETTTTEEEEEE--------CCCSSCEEEEEECSSCTTEEEEEE----TTSCEEEEETTSSSCEE
T ss_pred ----------CeEEEEECCCCcEEEEE--------cCcCCceEEEEecCCCCCceeeec----cccccccccccccceee
Confidence 23799999998765431 45778899999999997 455444 34569999999887644
Q ss_pred EEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEE
Q 004067 354 ILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTG 432 (776)
Q Consensus 354 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~ 432 (776)
.............-.|.| +++.++.+...+| .|.+||+.+++ ...+..+...+..+. |+|+|..+++++
T Consensus 207 ~~~~~~~~~~~~~~~~~p-------~~~~~l~sg~~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~-fsp~g~~~lasg 276 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHP-------QQSEVFVFGDENG--TVSLVDTKSTSCVLSSAVHSQCVTGLV-FSPHSVPFLASL 276 (344)
T ss_dssp ECC----CCCEEEEEECS-------SCTTEEEEEETTS--EEEEEESCC--CCEEEECCSSCEEEEE-ECSSSSCCEEEE
T ss_pred eeecceeeccceeeeecC-------CCCcceEEeccCC--cEEEEECCCCcEEEEEcCCCCCEEEEE-EccCCCeEEEEE
Confidence 322111100000011222 2344666666677 89999987665 455666666677665 999997777777
Q ss_pred ccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCC
Q 004067 433 TLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 500 (776)
Q Consensus 433 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~ 500 (776)
..++. +.||.+.. + ++.++..+. .+..++|||||++|+.+.+.+. .|.+++..++
T Consensus 277 s~D~~--i~vwd~~~---~-----~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~---~v~~w~v~~~ 332 (344)
T 4gqb_B 277 SEDCS--LAVLDSSL---S-----ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDH---QVVHHVVPTE 332 (344)
T ss_dssp ETTSC--EEEECTTC---C-----EEEEECCCSSCEEEEEECSSSTTEEEEEETTS---CEEEEECCC-
T ss_pred eCCCe--EEEEECCC---C-----cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC---eEEEEECCCC
Confidence 66654 67775432 2 445555544 4778999999998887776554 4888887554
No 214
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.72 E-value=3e-15 Score=176.46 Aligned_cols=264 Identities=13% Similarity=0.063 Sum_probs=179.4
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEE-eecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQEL-VFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
+..++|||||++|+..... ..|.+||+.+++... +..+. ..+....|+|
T Consensus 16 v~~i~~sp~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~------------------------~~v~~~~~s~- 65 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTE------------------------TPVRAGKFIA- 65 (814)
T ss_dssp EEEEEECSSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS------------------------SCEEEEEEEG-
T ss_pred eEEEEECCCCCEEEEEeCC-----CEEEEEECCCCceEEEEecCC------------------------CcEEEEEEeC-
Confidence 4889999999999987642 469999998887643 43322 4688999999
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCc-eeEEeeCCCCC
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINE-QRQLTHGANGN 212 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~-~~~lt~~~~~~ 212 (776)
||++|++. .++.|.+||+.+++....+..... .+..+.|||||+.|+.... +.|.+|++.++. ..+.......
T Consensus 66 --~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~- 141 (814)
T 3mkq_A 66 --RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH- 141 (814)
T ss_dssp --GGTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS-
T ss_pred --CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC-
Confidence 99999987 678899999998887645554443 4888999999999998875 579999999873 3332222111
Q ss_pred ceecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 213 TVTHGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
.+..+.|+| |++.|+....+ ..|.+||
T Consensus 142 ----------------~v~~~~~~p~~~~~l~~~~~d------------------------------------g~v~vwd 169 (814)
T 3mkq_A 142 ----------------FVMCVAFNPKDPSTFASGCLD------------------------------------RTVKVWS 169 (814)
T ss_dssp ----------------CEEEEEEETTEEEEEEEEETT------------------------------------SEEEEEE
T ss_pred ----------------cEEEEEEEcCCCCEEEEEeCC------------------------------------CeEEEEE
Confidence 145788999 78877776533 3589999
Q ss_pred cCCCceEEEEcccCCCCCCCCcceEEEEEecc--CCeEEEEEEeecCceEEEEEEECCCCceEEEEE-eccCceeecccc
Q 004067 292 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVNLHDC 368 (776)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~ 368 (776)
+.+++...... ......+..+.|+| ||+.++... .+..|.+||+.++....... +...... -.
T Consensus 170 ~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~~~~~~~~~~~v~~---~~ 235 (814)
T 3mkq_A 170 LGQSTPNFTLT-------TGQERGVNYVDYYPLPDKPYMITAS----DDLTIKIWDYQTKSCVATLEGHMSNVSF---AV 235 (814)
T ss_dssp TTCSSCSEEEE-------CCCTTCCCEEEECCSTTCCEEEEEC----TTSEEEEEETTTTEEEEEEECCSSCEEE---EE
T ss_pred CCCCcceeEEe-------cCCCCCEEEEEEEECCCCCEEEEEe----CCCEEEEEECCCCcEEEEEcCCCCCEEE---EE
Confidence 98766433321 22335677899999 888777664 34579999999887644433 2222111 11
Q ss_pred cccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEE
Q 004067 369 FTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFT 431 (776)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~ 431 (776)
|+| ++.++++...+| .|++|++.+++ ...+..+...+..+. |+|+|+.+++.
T Consensus 236 ~~~--------~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~ 288 (814)
T 3mkq_A 236 FHP--------TLPIIISGSEDG--TLKIWNSSTYKVEKTLNVGLERSWCIA-THPTGRKNYIA 288 (814)
T ss_dssp ECS--------SSSEEEEEETTS--CEEEEETTTCSEEEEECCSSSSEEEEE-ECTTCGGGEEE
T ss_pred EcC--------CCCEEEEEeCCC--eEEEEECCCCcEEEEeecCCCcEEEEE-EccCCCceEEE
Confidence 223 233566666667 79999987654 344544444555554 88988754333
No 215
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.72 E-value=8.5e-17 Score=163.85 Aligned_cols=206 Identities=12% Similarity=0.060 Sum_probs=136.0
Q ss_pred CCCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccc---cchhhhHHHHhC----CcEEEE
Q 004067 521 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN---TVDMRAQYLRSK----GILVWK 593 (776)
Q Consensus 521 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~---~~~~~~~~l~~~----G~~v~~ 593 (776)
..+.+.+++.+.++ .+.+++|.|++.. ..+++|+|+++||+++... .|.. .....++.|++. +|+|++
T Consensus 38 ~g~~~~~~~~s~~~-~~~~~vy~P~~~~-~~~~~Pvlv~lHG~~~~~~---~~~~~~~~~~~~~~~l~~~g~~~~~ivv~ 112 (297)
T 1gkl_A 38 AGRIVKETYTGING-TKSLNVYLPYGYD-PNKKYNIFYLMHGGGENEN---TIFSNDVKLQNILDHAIMNGELEPLIVVT 112 (297)
T ss_dssp CCEEEEEEEEETTE-EEEEEEEECTTCC-TTSCCEEEEEECCTTCCTT---STTSTTTCHHHHHHHHHHTTSSCCEEEEE
T ss_pred CceEEEEEEEcCCC-EEEEEEEeCCCCC-CCCCCCEEEEECCCCCCcc---hhhcccchHHHHHHHHHHcCCCCCEEEEE
Confidence 44567888888775 8999999998863 2368999999999876542 2321 223345666665 599999
Q ss_pred ECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC------------CCCCcEEEEeechHHHHHHHHHhhCCC
Q 004067 594 LDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL------------AKVGHIGLYGWSYGGYLSAITLARFPD 661 (776)
Q Consensus 594 ~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~------------id~~~i~l~G~S~GG~~a~~~a~~~~~ 661 (776)
+|++|....+..+... ..+|+. .++.++.. .+..+++|+|+||||++|+.++.++|+
T Consensus 113 pd~~~~~~~~~~~~~~--------~~~~l~---~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~ 181 (297)
T 1gkl_A 113 PTFNGGNCTAQNFYQE--------FRQNVI---PFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLD 181 (297)
T ss_dssp CCSCSTTCCTTTHHHH--------HHHTHH---HHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTT
T ss_pred ecCcCCccchHHHHHH--------HHHHHH---HHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCch
Confidence 9998643222222110 123333 44444322 266789999999999999999999999
Q ss_pred ceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCC-
Q 004067 662 VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR- 740 (776)
Q Consensus 662 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~- 740 (776)
+|+++++.+|...+.... + .....+...-....+.+...++++.+|+.|.. ...+.++.+.|++.+
T Consensus 182 ~f~~~v~~sg~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~l~~~~G~~D~~--~~~~~~l~~~L~~~g~ 248 (297)
T 1gkl_A 182 YVAYFMPLSGDYWYGNSP--Q---------DKANSIAEAINRSGLSKREYFVFAATGSEDIA--YANMNPQIEAMKALPH 248 (297)
T ss_dssp TCCEEEEESCCCCBSSSH--H---------HHHHHHHHHHHHHTCCTTSCEEEEEEETTCTT--HHHHHHHHHHHHTSTT
T ss_pred hhheeeEeccccccCCcc--c---------hhhhHHHHHHhhccCCcCcEEEEEEeCCCccc--chhHHHHHHHHHHcCC
Confidence 999999999986542110 0 00000000000011112234667778999976 457889999999988
Q ss_pred ---------CCeEEEEecCCCCCC
Q 004067 741 ---------KPYEILIFPDERHMP 755 (776)
Q Consensus 741 ---------~~~~~~~~~~~~H~~ 755 (776)
.++++.++|+++|.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 249 FDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp CCBBSCTTTCCEEEEEETTCCSSH
T ss_pred ccccccccCCceEEEECCCCCcCH
Confidence 589999999999964
No 216
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.72 E-value=1e-15 Score=154.66 Aligned_cols=262 Identities=12% Similarity=0.099 Sum_probs=191.5
Q ss_pred EeecCCCceEEEEeC---CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC---------------cEE
Q 004067 132 WVKTSSKKKIIMVPL---PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC---------------ELH 193 (776)
Q Consensus 132 ~sp~~~dg~~l~~~~---~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~---------------~l~ 193 (776)
++. ||++|+|.. ++.||.++.+++..+ +|+... .--++++|++|+|+..+ .||
T Consensus 21 ~~~---~g~~iy~~n~~d~~~ly~~~~dg~~~~-~l~~~~-----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy 91 (302)
T 3s25_A 21 FCE---SDGEVFFSNTNDNGRLYAMNIDGSNIH-KLSNDT-----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLC 91 (302)
T ss_dssp EEE---ETTEEEEEEGGGTTEEEEEETTSCSCE-EEEEEE-----EEEEEECSSEEEEEEECC------CCSSCCSEEEE
T ss_pred EEE---eCCEEEEEeCCCCceEEEEcCCCCCCE-EccCCc-----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEE
Confidence 567 999999984 678999999999988 887532 24679999999999753 599
Q ss_pred EEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCccee
Q 004067 194 VLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 273 (776)
Q Consensus 194 ~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (776)
.+++++++.++|+... +..|+|+|++|+|......
T Consensus 92 ~i~~dg~~~~~l~~~~----------------------~~~~s~~g~~Iy~~~~~~~----------------------- 126 (302)
T 3s25_A 92 RIKRNGHGSTVLDPDP----------------------CIYASLIGNYIYYLHYDTQ----------------------- 126 (302)
T ss_dssp EEETTSCCCEEEECSC----------------------EEEEEEETTEEEEEEESSS-----------------------
T ss_pred EEeCCCCcceEeecCC----------------------ccEEEEeCCEEEEEeecCC-----------------------
Confidence 9999999988887643 3468999999999762111
Q ss_pred cCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEE
Q 004067 274 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV 353 (776)
Q Consensus 274 ~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~ 353 (776)
....|+..++++...++|... .. ..|+|+|+.|+++.. ....|++++++++..++
T Consensus 127 ---------~~~~Iy~~~~dGs~~~~lt~~---------~~----~~~~~~g~~iy~t~~---g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 127 ---------TATSLYRIRIDGEEKKKIKNH---------YL----FTCNTSDRYFYYNNP---KNGQLYRYDTASQSEAL 181 (302)
T ss_dssp ---------SCEEEEEEETTSCCCEEEESS---------CC----CCSEEETTEEEEECT---TTCCEEEEETTTTEEEE
T ss_pred ---------CCceEEEEECCCCCeEEEeCC---------Cc----eEeeEECCEEEEEeC---CCceEEEEECCCCCEEE
Confidence 116799999998888877442 11 457889999988854 34579999999998888
Q ss_pred EEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEc
Q 004067 354 ILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGT 433 (776)
Q Consensus 354 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~ 433 (776)
|++. .... | +.++++.++|+...++ .+|++++++|+..++|+.... .+++++|++||+...
T Consensus 182 l~~~--~~~~-------~----~~P~g~~iy~t~~~~~-~~I~~~~ldG~~~~~Lt~~~~-----~~~~~~g~~Iy~~~~ 242 (302)
T 3s25_A 182 FYDC--NCYK-------P----VVLDDTNVYYMDVNRD-NAIVHVNINNPNPVVLTEANI-----EHYNVYGSLIFYQRG 242 (302)
T ss_dssp EECS--CEEE-------E----EEEETTEEEEEEGGGT-TEEEEECSSSCCCEECSCSCE-----EEEEEETTEEEEEEC
T ss_pred EeCC--Cccc-------e----eeecCCEEEEEEcCCC-cEEEEEECCCCCeEEEeCCCc-----ceEEECCCEEEEEEC
Confidence 8542 2111 1 0123556777665544 799999999999999987542 458999999999865
Q ss_pred cCCCceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEeec
Q 004067 434 LDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 507 (776)
Q Consensus 434 ~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 507 (776)
... ..|+.+++ +|. ..++|+... ..++++.+.+|.|+-.... .|+++.. +|+..++|.
T Consensus 243 ~~~---~~i~~~~~--DG~----~r~~l~~~~---~~~i~i~~d~Iy~td~~~~---~i~~~~~-dGs~~~~l~ 300 (302)
T 3s25_A 243 GDN---PALCVVKN--DGT----GFKELAKGE---FCNINVTSQYVYFTDFVSN---KEYCTST-QNPDTIKAL 300 (302)
T ss_dssp SSS---CEEEEEET--TSC----CCEEEEESC---EEEEEECSSEEEEEETTTC---CEEEEES-SSCCSCEEC
T ss_pred CCC---cEEEEEEC--CCC----ccEEeeCCc---cceEEEeCCEEEEEECCCC---eEEEEEC-CCCCceEec
Confidence 543 48999999 776 456666542 2367889999999865433 3888875 555445443
No 217
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.72 E-value=5.2e-15 Score=156.17 Aligned_cols=292 Identities=13% Similarity=0.099 Sum_probs=179.5
Q ss_pred CcCCCceeEcCCCCEEEEEeCCCCc--CcceEEEEecCCCceE------EeecCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 004067 54 YVAPTSIGFSPDDNLITYLLSPDHS--LSRKVFSFDPKTCKQE------LVFSPPDGGLDENNISPEEKLRRERLRERGL 125 (776)
Q Consensus 54 ~~~~~~~~~SpDG~~ia~~~~~~~~--~~~~l~~~~~~~~~~~------~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 125 (776)
|..+..++|||||+.|+--..+... -.+.|.+|+++.+... .... ..++.+ ..
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~--------~~l~~~-----------~~ 74 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSE--------FALEDN-----------DD 74 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEE--------EECCTT-----------SC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeE--------EEccCC-----------CC
Confidence 3445789999999999854322110 1235888887755321 0000 000000 01
Q ss_pred CeeeEEEeecCCCceEEEEe------------CCCcEEEEeCCCCccce-ecC-----C--CCCCCccCceeCCCCCEEE
Q 004067 126 GVTRYEWVKTSSKKKIIMVP------------LPDGIYFQDLSCSKPEL-KLS-----S--SSCSPVIDPHLSSDGTMIA 185 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~------------~~~~l~~~d~~~~~~~~-~l~-----~--~~~~~~~~~~~SpDg~~la 185 (776)
.+. .+++ +++.++.. .+..+.+|++++.+... .+. . .....+...+|||||+.++
T Consensus 75 ~v~--s~~~---~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la 149 (365)
T 4h5i_A 75 SPT--AIDA---SKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAA 149 (365)
T ss_dssp CCC--EEEE---ETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEE
T ss_pred ceE--EEEe---CCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEE
Confidence 233 4566 77777664 35567777776554321 111 1 1111245689999999998
Q ss_pred EEEC---CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCC
Q 004067 186 FVRD---CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGK 262 (776)
Q Consensus 186 ~~~~---~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 262 (776)
..+. +.|.+||+.+++.......... +..++|||||+.|+..+.+
T Consensus 150 ~as~~~d~~i~iwd~~~~~~~~~~~~~~~------------------V~~v~fspdg~~l~s~s~~-------------- 197 (365)
T 4h5i_A 150 IASSKVPAIMRIIDPSDLTEKFEIETRGE------------------VKDLHFSTDGKVVAYITGS-------------- 197 (365)
T ss_dssp EEESCSSCEEEEEETTTTEEEEEEECSSC------------------CCEEEECTTSSEEEEECSS--------------
T ss_pred EEECCCCCEEEEeECCCCcEEEEeCCCCc------------------eEEEEEccCCceEEeccce--------------
Confidence 8764 4599999999876554332221 5588999999999876531
Q ss_pred CCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEE
Q 004067 263 SSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVL 342 (776)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~ 342 (776)
.+.+|+..+++....... ..+...+..++|||||+.++..+........++
T Consensus 198 -----------------------~~~~~~~~~~~~~~~~~~------~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 198 -----------------------SLEVISTVTGSCIARKTD------FDKNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp -----------------------CEEEEETTTCCEEEEECC------CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred -----------------------eEEEEEeccCcceeeeec------CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 246777777665443332 456677899999999998887776655566789
Q ss_pred EEECCCCceEEEEE-----eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-ecc-ccCCeEE
Q 004067 343 KFDIKTGQRKVILV-----EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPI-TEGDWMV 415 (776)
Q Consensus 343 ~~d~~~g~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~l-t~~~~~~ 415 (776)
.|+...+....+.. +...... -.|+| ++.++++...++ .|.+||+.+++. ..+ ..+...|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~V~~---~~~Sp--------dg~~lasgs~D~--~V~iwd~~~~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 249 KISIKSGNTSVLRSKQVTNRFKGITS---MDVDM--------KGELAVLASNDN--SIALVKLKDLSMSKIFKQAHSFAI 315 (365)
T ss_dssp EEEEETTEEEEEEEEEEESSCSCEEE---EEECT--------TSCEEEEEETTS--CEEEEETTTTEEEEEETTSSSSCE
T ss_pred ecccccceecceeeeeecCCCCCeEe---EEECC--------CCCceEEEcCCC--EEEEEECCCCcEEEEecCcccCCE
Confidence 99987766543321 1111111 12333 344666666677 899999987764 443 4566677
Q ss_pred EEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 416 EQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 416 ~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
..+. |||||++|+ +++.++. ++||.++.
T Consensus 316 ~~v~-fSpdg~~la-S~S~D~t--vrvw~ip~ 343 (365)
T 4h5i_A 316 TEVT-ISPDSTYVA-SVSAANT--IHIIKLPL 343 (365)
T ss_dssp EEEE-ECTTSCEEE-EEETTSE--EEEEECCT
T ss_pred EEEE-ECCCCCEEE-EEeCCCe--EEEEEcCC
Confidence 7765 999999654 4555544 88988864
No 218
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.71 E-value=1.1e-16 Score=160.14 Aligned_cols=201 Identities=14% Similarity=-0.011 Sum_probs=132.3
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCC
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 634 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 634 (776)
|.||++||.+.+.. .|..++..|++.||.|+++|+||+|.|..... ..+.++++.+.+..+++.-.
T Consensus 4 ~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l~ 69 (257)
T 3c6x_A 4 AHFVLIHTICHGAW-------IWHKLKPLLEALGHKVTALDLAASGVDPRQIE-------EIGSFDEYSEPLLTFLEALP 69 (257)
T ss_dssp CEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHTHHHHHHHHTSC
T ss_pred CcEEEEcCCccCcC-------CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcc-------cccCHHHHHHHHHHHHHhcc
Confidence 67999999765543 34556888989999999999999998864211 01235566655555555421
Q ss_pred CCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCC-c--c--c----cc---cccccc-----------------
Q 004067 635 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS-W--D--G----YD---TFYTEK----------------- 685 (776)
Q Consensus 635 id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~-~--~--~----~~---~~~~~~----------------- 685 (776)
..+++.|+||||||++++.++.++|++++++|+.++... . . . .. ..+...
T Consensus 70 -~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T 3c6x_A 70 -PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKL 148 (257)
T ss_dssp -TTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEEC
T ss_pred -ccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccc
Confidence 135899999999999999999999999999998765321 0 0 0 00 000000
Q ss_pred --------ccCC-CCCCccc---hhcC-----------ChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCC
Q 004067 686 --------YMGL-PSEDPVG---YEYS-----------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 742 (776)
Q Consensus 686 --------~~~~-~~~~~~~---~~~~-----------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 742 (776)
+... +...... .... .........+.|+|+++|++|..+|+...+.+.+.+ .+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~----~~ 224 (257)
T 3c6x_A 149 GFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY----KP 224 (257)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS----CC
T ss_pred cHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHC----CC
Confidence 0000 0000000 0000 000000012579999999999999998888777765 45
Q ss_pred eEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 743 YEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 743 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
.+++++|++||.. ..+.++++.+.+.+|++++
T Consensus 225 ~~~~~i~~~gH~~-~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 225 DKVYKVEGGDHKL-QLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp SEEEECCSCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred CeEEEeCCCCCCc-ccCCHHHHHHHHHHHHHhc
Confidence 7999999999987 6678899999999999764
No 219
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=3.2e-15 Score=155.71 Aligned_cols=279 Identities=6% Similarity=-0.010 Sum_probs=167.3
Q ss_pred eeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCc
Q 004067 60 IGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKK 139 (776)
Q Consensus 60 ~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg 139 (776)
..|++++++++.....+ ..|.+||+++++......... ... ...|+| ||
T Consensus 3 ~~~~~~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~-----------------------~~~-~~~~s~---dg 51 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHL----RRISFFSTDTLEILNQITLGY-----------------------DFV-DTAITS---DC 51 (331)
T ss_dssp ----CCCCEEEEEEGGG----TEEEEEETTTCCEEEEEECCC-----------------------CEE-EEEECS---SS
T ss_pred eeEcCCCCEEEEEecCC----CeEEEEeCcccceeeeEEccC-----------------------Ccc-eEEEcC---CC
Confidence 45788888766554433 579999999998865553211 234 789999 99
Q ss_pred eEEEEe--CCCcEEEEeCCCCcc-ceecCCCCCCCccC-ceeCCCCCEEEEEECC----cEEEEecCCCceeEEeeCCCC
Q 004067 140 KIIMVP--LPDGIYFQDLSCSKP-ELKLSSSSCSPVID-PHLSSDGTMIAFVRDC----ELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 140 ~~l~~~--~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~-~~~SpDg~~la~~~~~----~l~~~~l~~g~~~~lt~~~~~ 211 (776)
++|++. .++.|++||+.+++. ...+.... .... +.|||||++|+..... .|+++++++++..+....+..
T Consensus 52 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 129 (331)
T 3u4y_A 52 SNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ--SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD 129 (331)
T ss_dssp CEEEEEESTTCEEEEEECSSSSCEEEEEEECS--SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT
T ss_pred CEEEEEeCCCCeEEEEECCCCceeEEecccCC--CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC
Confidence 988876 356899999999886 42444433 2445 8999999999844334 699999999987665443321
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
...++|+|||++|++...... ..+.+|+
T Consensus 130 ------------------~~~~~~spdg~~l~~~~~~~~----------------------------------~~i~~~~ 157 (331)
T 3u4y_A 130 ------------------AVGIAISPNGNGLILIDRSSA----------------------------------NTVRRFK 157 (331)
T ss_dssp ------------------EEEEEECTTSSCEEEEEETTT----------------------------------TEEEEEE
T ss_pred ------------------ccceEECCCCCEEEEEecCCC----------------------------------ceEEEEE
Confidence 237889999998877654322 1145555
Q ss_pred cCCCc-eEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce---EEEEEeccCceeeccc
Q 004067 292 AAGGP-VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR---KVILVEELDSWVNLHD 367 (776)
Q Consensus 292 ~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~~~~~~~~~~ 367 (776)
++... ....... ..........+.|||||+.+++... ....|++||+++++. ......... ...-
T Consensus 158 ~~~~g~~~~~~~~-----~~~~~~~~~~~~~spdg~~l~v~~~---~~~~v~v~d~~~~~~~~~~~~~~~~~~---~~~~ 226 (331)
T 3u4y_A 158 IDADGVLFDTGQE-----FISGGTRPFNITFTPDGNFAFVANL---IGNSIGILETQNPENITLLNAVGTNNL---PGTI 226 (331)
T ss_dssp ECTTCCEEEEEEE-----EECSSSSEEEEEECTTSSEEEEEET---TTTEEEEEECSSTTSCEEEEEEECSSC---CCCE
T ss_pred ECCCCcEeecCCc-----cccCCCCccceEECCCCCEEEEEeC---CCCeEEEEECCCCcccceeeeccCCCC---CceE
Confidence 54322 2111000 0112233578999999997766643 234699999998886 322222111 0111
Q ss_pred ccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccC-------C--eEEEEEEeecCCCcEEEEEEccCCCc
Q 004067 368 CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG-------D--WMVEQIVGVNEASGQVYFTGTLDGPL 438 (776)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~-------~--~~~~~~~~~s~dg~~i~~~~~~~~~~ 438 (776)
.|+| +++.+|++.. +...|++|++++++.+.+... . ......+.|+|||++||+.....+.
T Consensus 227 ~~sp--------dg~~l~v~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~- 296 (331)
T 3u4y_A 227 VVSR--------DGSTVYVLTE-STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRE- 296 (331)
T ss_dssp EECT--------TSSEEEEECS-SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTE-
T ss_pred EECC--------CCCEEEEEEc-CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCc-
Confidence 1222 2334454433 334799999988776333211 0 0000113599999998888765542
Q ss_pred eeeEEEE
Q 004067 439 ESHLYCA 445 (776)
Q Consensus 439 ~~~l~~~ 445 (776)
+.+|.+
T Consensus 297 -v~v~d~ 302 (331)
T 3u4y_A 297 -LKVFTI 302 (331)
T ss_dssp -EEEEET
T ss_pred -EEEEEe
Confidence 455544
No 220
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.6e-14 Score=152.48 Aligned_cols=297 Identities=7% Similarity=-0.030 Sum_probs=188.5
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCce
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~ 202 (776)
..+....|+| ||+.|+.. .++.|++||+.+++....+..... .+..+.|+|||+.|+.... +.|.+|++.+++.
T Consensus 33 ~~v~~~~~s~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 33 RPLTQVKYNK---EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG-TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC 108 (369)
T ss_dssp SCEEEEEECT---TSCEEEEEESSSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred ceEEEEEEcC---CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 3688999999 99999986 678999999998887745554443 4888999999999998875 5799999999877
Q ss_pred eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCC
Q 004067 203 RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASN 282 (776)
Q Consensus 203 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 282 (776)
......... +..+.|+|||+.|+....+...
T Consensus 109 ~~~~~~~~~------------------v~~~~~~~~~~~l~~~~~~~~~------------------------------- 139 (369)
T 3zwl_B 109 VATWKSPVP------------------VKRVEFSPCGNYFLAILDNVMK------------------------------- 139 (369)
T ss_dssp EEEEECSSC------------------EEEEEECTTSSEEEEEECCBTT-------------------------------
T ss_pred EEEeecCCC------------------eEEEEEccCCCEEEEecCCccC-------------------------------
Confidence 655442221 4578899999999887643110
Q ss_pred CeEEEEEEEcCCCceE-EEEcccCCC--CCCCCc--ceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC-CceEEEEE
Q 004067 283 VKVRLGVVSAAGGPVS-WMDLQCGGT--DQNYDE--EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-GQRKVILV 356 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~-~l~~~~~~~--~~~~~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~-g~~~~l~~ 356 (776)
....|.+||+.++... .+......+ ....+. ..+..++|+|||+.++... .+..|++||+.+ +.......
T Consensus 140 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~ 215 (369)
T 3zwl_B 140 NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH----KDGKISKYDVSNNYEYVDSID 215 (369)
T ss_dssp BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE----TTSEEEEEETTTTTEEEEEEE
T ss_pred CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc----CCCEEEEEECCCCcEeEEEEe
Confidence 0134667776654311 010000000 001222 2788999999999877665 345799999988 44433333
Q ss_pred -eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccC
Q 004067 357 -EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD 435 (776)
Q Consensus 357 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~ 435 (776)
+...... -.|+| ++.++++...+| .|++||+.+++..........+.... |+++++.+++.....
T Consensus 216 ~~~~~v~~---~~~~~--------~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 216 LHEKSISD---MQFSP--------DLTYFITSSRDT--NSFLVDVSTLQVLKKYETDCPLNTAV-ITPLKEFIILGGGQE 281 (369)
T ss_dssp CCSSCEEE---EEECT--------TSSEEEEEETTS--EEEEEETTTCCEEEEEECSSCEEEEE-ECSSSSEEEEEECCC
T ss_pred cCCCceeE---EEECC--------CCCEEEEecCCc--eEEEEECCCCceeeeecCCCCceeEE-ecCCCceEEEeecCC
Confidence 2222111 11222 234556666667 89999988776544444444555554 999999888876543
Q ss_pred CC---------ceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCc
Q 004067 436 GP---------LESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 501 (776)
Q Consensus 436 ~~---------~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~ 501 (776)
.. ....++..++. .+. ....+..+. .+..+.|+|||+.|+..... ..|.+|++..+.
T Consensus 282 ~~~~~~~~~~~~~~~i~~~d~~-~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~~~ 348 (369)
T 3zwl_B 282 AKDVTTTSANEGKFEARFYHKI-FEE----EIGRVQGHFGPLNTVAISPQGTSYASGGED----GFIRLHHFEKSY 348 (369)
T ss_dssp -------------CEEEEEETT-TCC----EEEEEECCSSCEEEEEECTTSSEEEEEETT----SEEEEEEECHHH
T ss_pred CceEEEEecCCCcceeEEEecC-CCc----chhheecccCcEEEEEECCCCCEEEEEcCC----CeEEEEECcccc
Confidence 20 01133444442 222 444555443 46788999999988866443 469999986654
No 221
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.71 E-value=3.8e-17 Score=177.65 Aligned_cols=228 Identities=13% Similarity=0.089 Sum_probs=146.7
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhH---HHHhCCcEEEEECCCC--CCCCchhhhh
Q 004067 534 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQ---YLRSKGILVWKLDNRG--TARRGLKFEA 608 (776)
Q Consensus 534 g~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~---~l~~~G~~v~~~d~rg--~g~~~~~~~~ 608 (776)
|..+++..+.+.+. .+.|+||++||.+++......| ..++. .|...||.|+++|+|| +|.++.....
T Consensus 93 g~~l~y~~~G~~~~----~~~p~vvllHG~~~~~~~~~~w----~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~ 164 (444)
T 2vat_A 93 DVPVAYKSWGRMNV----SRDNCVIVCHTLTSSAHVTSWW----PTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPD 164 (444)
T ss_dssp EEEEEEEEESCCCT----TSCCEEEEECCTTCCSCGGGTC----GGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBC
T ss_pred ceeEEEEEecCCCC----CCCCeEEEECCCCcccchhhHH----HHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCC
Confidence 34566666665432 2348999999987765421113 22232 4667899999999999 5766431100
Q ss_pred hh-------hhccCCccHHHHHHHHHHHHHcCCCCCCc-EEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-
Q 004067 609 SI-------KHNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD- 679 (776)
Q Consensus 609 ~~-------~~~~~~~~~~D~~~~i~~l~~~~~id~~~-i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~- 679 (776)
.. ...+....++|+.+.+..+++.. ..++ ++++||||||++++.+|.++|++++++|+.++........
T Consensus 165 ~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l--~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~ 242 (444)
T 2vat_A 165 PDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRL--GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCA 242 (444)
T ss_dssp TTTC--CBCGGGCCCCCHHHHHHHHHHHHHHH--TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHH
T ss_pred cccccccccccccccccHHHHHHHHHHHHHhc--CCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccch
Confidence 00 00111245677777776666543 3357 9999999999999999999999999999988765321000
Q ss_pred ---------------------------------------------ccccccccCCCC-----------------------
Q 004067 680 ---------------------------------------------TFYTEKYMGLPS----------------------- 691 (776)
Q Consensus 680 ---------------------------------------------~~~~~~~~~~~~----------------------- 691 (776)
..+...+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (444)
T 2vat_A 243 AWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGN 322 (444)
T ss_dssp HHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------
T ss_pred hHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccc
Confidence 000001111100
Q ss_pred --------CCccch---------h---------------cC--------ChhhhhccCCCcEEEEecCCCCccChHHHHH
Q 004067 692 --------EDPVGY---------E---------------YS--------SVMHHVHKMKGKLLLVHGMIDENVHFRHTAR 731 (776)
Q Consensus 692 --------~~~~~~---------~---------------~~--------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~ 731 (776)
...+.+ . .. +....+.++++|+|+++|++|..+++..+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~ 402 (444)
T 2vat_A 323 SHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVE 402 (444)
T ss_dssp ------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHH
T ss_pred cccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHH
Confidence 000000 0 00 1344567889999999999999999998888
Q ss_pred HHHHHHHCCCCeEEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 732 LINALVAARKPYEILIFP-DERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 732 ~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+.+.+ .+.++++++ ++||.. ..+..+++.+.+.+||++++
T Consensus 403 l~~~~----p~~~~~~i~~~~GH~~-~~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 403 MGRSI----PNSRLCVVDTNEGHDF-FVMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHHS----TTEEEEECCCSCGGGH-HHHTHHHHHHHHHHHHTC--
T ss_pred HHHHC----CCcEEEEeCCCCCcch-HHhCHHHHHHHHHHHHHHhc
Confidence 87765 468999999 899986 44668899999999998764
No 222
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.71 E-value=9.4e-15 Score=156.99 Aligned_cols=274 Identities=14% Similarity=0.102 Sum_probs=189.6
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEE-eecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQEL-VFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
++.+.|||||+.|+-.+.+ ..|.+||+.+++... +..| ...+....|+|
T Consensus 111 V~~~~~~p~~~~l~s~s~D-----g~i~vwd~~~~~~~~~l~~h------------------------~~~V~~v~~~~- 160 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASED-----ATIKVWDYETGDFERTLKGH------------------------TDSVQDISFDH- 160 (410)
T ss_dssp EEEEEECSSSSEEEEEESS-----SCEEEEETTTCCCCEEECCC------------------------SSCEEEEEECT-
T ss_pred EEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEecc------------------------CCcEEEEEEcC-
Confidence 5688999999999865542 469999999887644 3332 24688999999
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCc
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNT 213 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~ 213 (776)
||+.|+.. .++.|.+||+.+++....+..+. ..+....|+|||+.|+..+. +.|.+||+.++..........
T Consensus 161 --~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~-~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~--- 234 (410)
T 1vyh_C 161 --SGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR--- 234 (410)
T ss_dssp --TSSEEEEEETTSCCCEEETTSSCEEECCCCCS-SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS---
T ss_pred --CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC-CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC---
Confidence 99988876 78899999999887663444333 34888999999999888775 579999999887543322211
Q ss_pred eecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 214 VTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
.+ +..+.|+|||+.|+..+.+ ..|.+||+.
T Consensus 235 ------~~--------v~~~~~~~~g~~l~s~s~D------------------------------------~~v~vwd~~ 264 (410)
T 1vyh_C 235 ------EW--------VRMVRPNQDGTLIASCSND------------------------------------QTVRVWVVA 264 (410)
T ss_dssp ------SC--------EEEEEECTTSSEEEEEETT------------------------------------SCEEEEETT
T ss_pred ------cc--------EEEEEECCCCCEEEEEcCC------------------------------------CeEEEEECC
Confidence 11 3467899999988876643 237899999
Q ss_pred CCceEEEEcccCCCCCCCCcceEEEEEeccC--------------------CeEEEEEEeecCceEEEEEEECCCCceEE
Q 004067 294 GGPVSWMDLQCGGTDQNYDEEYLARVNWMHG--------------------NILTAQVLNRSQTKLKVLKFDIKTGQRKV 353 (776)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpD--------------------g~~l~~~~~~~~~~~~l~~~d~~~g~~~~ 353 (776)
+++....- ..+...+..+.|+|+ |.+++..+ .+..|.+||+.++....
T Consensus 265 ~~~~~~~~--------~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs----~D~~i~iwd~~~~~~~~ 332 (410)
T 1vyh_C 265 TKECKAEL--------REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCLM 332 (410)
T ss_dssp TCCEEEEE--------CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE----TTSEEEEEETTTTEEEE
T ss_pred CCceeeEe--------cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe----CCCeEEEEECCCCceEE
Confidence 88765431 456677899999997 44565554 45569999999887544
Q ss_pred EEE-eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEE
Q 004067 354 ILV-EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFT 431 (776)
Q Consensus 354 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~ 431 (776)
... +...... -.|+| ++.++++...+| .|++||..+++ ...+..+...+..+. |++++..|+ +
T Consensus 333 ~~~~h~~~v~~---v~~~~--------~g~~l~s~s~D~--~i~vwd~~~~~~~~~~~~h~~~v~~l~-~~~~~~~l~-s 397 (410)
T 1vyh_C 333 TLVGHDNWVRG---VLFHS--------GGKFILSCADDK--TLRVWDYKNKRCMKTLNAHEHFVTSLD-FHKTAPYVV-T 397 (410)
T ss_dssp EEECCSSCEEE---EEECS--------SSSCEEEEETTT--EEEEECCTTSCCCEEEECCSSCEEEEE-ECSSSSCEE-E
T ss_pred EEECCCCcEEE---EEEcC--------CCCEEEEEeCCC--eEEEEECCCCceEEEEcCCCCcEEEEE-EcCCCCEEE-E
Confidence 333 3222111 12333 334566666677 89999987664 455666666677665 999998654 4
Q ss_pred EccCCCceeeEEEE
Q 004067 432 GTLDGPLESHLYCA 445 (776)
Q Consensus 432 ~~~~~~~~~~l~~~ 445 (776)
++.++ .+.+|.+
T Consensus 398 gs~D~--~i~vW~~ 409 (410)
T 1vyh_C 398 GSVDQ--TVKVWEC 409 (410)
T ss_dssp EETTS--EEEEEC-
T ss_pred EeCCC--cEEEEeC
Confidence 44444 3778764
No 223
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.71 E-value=1.3e-14 Score=150.08 Aligned_cols=279 Identities=12% Similarity=0.114 Sum_probs=183.0
Q ss_pred CCeeeEEEeec-CCCceEEEEe-CCCcEEEEeCCCCccce--ecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCC
Q 004067 125 LGVTRYEWVKT-SSKKKIIMVP-LPDGIYFQDLSCSKPEL--KLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLI 199 (776)
Q Consensus 125 ~~~~~~~~sp~-~~dg~~l~~~-~~~~l~~~d~~~~~~~~--~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~ 199 (776)
..+....|+|. ..+++.|+.. .++.|.+||+.+++... .+..... .+..+.|+|+++.++..+. +.|.+||+.+
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~-~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~ 111 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL-GVVSVDISHTLPIAASSSLDAHIRLWDLEN 111 (321)
T ss_dssp SCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCC-CEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 47889999981 1135566654 78899999998776431 2333333 4788999999998888774 5799999998
Q ss_pred CceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCC
Q 004067 200 NEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAG 279 (776)
Q Consensus 200 g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (776)
++.......... .+..++|+|||+.|+....+
T Consensus 112 ~~~~~~~~~~~~-----------------~~~~~~~spdg~~l~~g~~d------------------------------- 143 (321)
T 3ow8_A 112 GKQIKSIDAGPV-----------------DAWTLAFSPDSQYLATGTHV------------------------------- 143 (321)
T ss_dssp TEEEEEEECCTT-----------------CCCCEEECTTSSEEEEECTT-------------------------------
T ss_pred CCEEEEEeCCCc-----------------cEEEEEECCCCCEEEEEcCC-------------------------------
Confidence 876443332211 13468899999998876532
Q ss_pred CCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE-ec
Q 004067 280 ASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EE 358 (776)
Q Consensus 280 ~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~ 358 (776)
..+.+|++.+++..... ..+...+..++|+|||+.|+... .+..|.+||+.+++...... +.
T Consensus 144 -----g~v~i~~~~~~~~~~~~--------~~~~~~v~~~~~spdg~~lasg~----~dg~i~iwd~~~~~~~~~~~~h~ 206 (321)
T 3ow8_A 144 -----GKVNIFGVESGKKEYSL--------DTRGKFILSIAYSPDGKYLASGA----IDGIINIFDIATGKLLHTLEGHA 206 (321)
T ss_dssp -----SEEEEEETTTCSEEEEE--------ECSSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTTEEEEEECCCS
T ss_pred -----CcEEEEEcCCCceeEEe--------cCCCceEEEEEECCCCCEEEEEc----CCCeEEEEECCCCcEEEEEcccC
Confidence 35789999887754331 23455688999999999888765 34569999999887644333 22
Q ss_pred cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCC
Q 004067 359 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP 437 (776)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~ 437 (776)
..... -.|+| ++.++++...+| .|.+||+..++ ...+..+...+..+. |+|+|+.|+..+ .++.
T Consensus 207 ~~v~~---l~~sp--------d~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~-~sp~~~~l~s~s-~D~~ 271 (321)
T 3ow8_A 207 MPIRS---LTFSP--------DSQLLVTASDDG--YIKIYDVQHANLAGTLSGHASWVLNVA-FCPDDTHFVSSS-SDKS 271 (321)
T ss_dssp SCCCE---EEECT--------TSCEEEEECTTS--CEEEEETTTCCEEEEECCCSSCEEEEE-ECTTSSEEEEEE-TTSC
T ss_pred CceeE---EEEcC--------CCCEEEEEcCCC--eEEEEECCCcceeEEEcCCCCceEEEE-ECCCCCEEEEEe-CCCc
Confidence 22111 11333 234666666677 79999987655 445665665666654 999999755444 4433
Q ss_pred ceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 438 LESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 438 ~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
+.+|.+. .+. .+..+..+. .+..+.|+|||+.|+..... ..|.+||.
T Consensus 272 --v~iwd~~---~~~----~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d----~~i~vwd~ 319 (321)
T 3ow8_A 272 --VKVWDVG---TRT----CVHTFFDHQDQVWGVKYNGNGSKIVSVGDD----QEIHIYDC 319 (321)
T ss_dssp --EEEEETT---TTE----EEEEECCCSSCEEEEEECTTSSEEEEEETT----CCEEEEEC
T ss_pred --EEEEeCC---CCE----EEEEEcCCCCcEEEEEECCCCCEEEEEeCC----CeEEEEeC
Confidence 7787664 232 445555443 47789999999988765433 24777774
No 224
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.71 E-value=1.5e-14 Score=148.67 Aligned_cols=269 Identities=13% Similarity=0.051 Sum_probs=177.6
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+-.+. ...|.+||+.+++........ ...+....|+|
T Consensus 16 V~~~~fsp~~~~l~s~~~-----dg~v~lWd~~~~~~~~~~~~~-----------------------~~~v~~~~~~~-- 65 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLY-----SGRVELWNYETQVEVRSIQVT-----------------------ETPVRAGKFIA-- 65 (304)
T ss_dssp EEEEEECSSSSEEEEEET-----TSEEEEEETTTTEEEEEEECC-----------------------SSCEEEEEEEG--
T ss_pred eEEEEECCCCCEEEEEcC-----CCcEEEEECCCCceeEEeecc-----------------------CCcEEEEEEeC--
Confidence 588999999999986554 246999999988764333211 13678899999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCce
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTV 214 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~ 214 (776)
||+.|+.. .++.|.+||+.+++....+..+.. .+..++|+||++.|+..+. +.|.+|++.++.....+..+..
T Consensus 66 -~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~--- 140 (304)
T 2ynn_A 66 -RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE--- 140 (304)
T ss_dssp -GGTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC---
T ss_pred -CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC-cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC---
Confidence 99999876 678899999999887645554443 4888999999999888775 5799999998744322222211
Q ss_pred ecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 215 THGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
..+..++|+| |++.|+..+.+ ..|.+||+.
T Consensus 141 -------------~~v~~v~~~p~~~~~l~sgs~D------------------------------------~~v~iwd~~ 171 (304)
T 2ynn_A 141 -------------HFVMCVAFNPKDPSTFASGCLD------------------------------------RTVKVWSLG 171 (304)
T ss_dssp -------------SCEEEEEECTTCTTEEEEEETT------------------------------------SEEEEEETT
T ss_pred -------------CcEEEEEECCCCCCEEEEEeCC------------------------------------CeEEEEECC
Confidence 1145788999 56777766543 358999987
Q ss_pred CCceEEEEcccCCCCCCCCcceEEEEEecc--CCeEEEEEEeecCceEEEEEEECCCCceEEEEE-eccCceeecccccc
Q 004067 294 GGPVSWMDLQCGGTDQNYDEEYLARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVNLHDCFT 370 (776)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~~ 370 (776)
+++...... ..+...+..+.|+| |+++++..+ .+..|.+||+.+++...... +...... -.|+
T Consensus 172 ~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l~s~s----~D~~i~iWd~~~~~~~~~~~~h~~~v~~---~~~~ 237 (304)
T 2ynn_A 172 QSTPNFTLT-------TGQERGVNYVDYYPLPDKPYMITAS----DDLTIKIWDYQTKSCVATLEGHMSNVSF---AVFH 237 (304)
T ss_dssp CSSCSEEEE-------CCCTTCEEEEEECCSTTCCEEEEEE----TTSEEEEEETTTTEEEEEEECCSSCEEE---EEEC
T ss_pred CCCccceec-------cCCcCcEEEEEEEEcCCCCEEEEEc----CCCeEEEEeCCCCccceeeCCCCCCEEE---EEEC
Confidence 665332211 23344566778876 677777665 45679999999887644333 3322221 1233
Q ss_pred cCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEEEEEeecCCCcEE-EEEEcc
Q 004067 371 PLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQV-YFTGTL 434 (776)
Q Consensus 371 ~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~dg~~i-~~~~~~ 434 (776)
| ++.++++...+| .|.+||..+++. +.+..+...+..+. ++|+|+.. ++.+..
T Consensus 238 p--------~~~~l~s~s~Dg--~i~iWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~asg~~ 292 (304)
T 2ynn_A 238 P--------TLPIIISGSEDG--TLKIWNSSTYKVEKTLNVGLERSWCIA-THPTGRKNYIASGFD 292 (304)
T ss_dssp S--------SSSEEEEEETTS--CEEEEETTTCCEEEEECCSSSSEEEEE-ECTTCGGGCEEEEET
T ss_pred C--------CCCEEEEEcCCC--eEEEEECCCCceeeeccCCCccEEEEE-ECCCCCceEEEEecC
Confidence 3 233666666777 899999887654 45555444445443 67777544 444433
No 225
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=2.6e-15 Score=172.96 Aligned_cols=248 Identities=10% Similarity=0.019 Sum_probs=170.4
Q ss_pred CeeeEEEeecCCCceEEEEeC------CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC---------
Q 004067 126 GVTRYEWVKTSSKKKIIMVPL------PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC--------- 190 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~~------~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~--------- 190 (776)
.+..+.||| ||++|+|.. ..+|+++|+++++.. ............+.|||||+.|+|++..
T Consensus 122 ~~~~~~~SP---DG~~la~~~~~~G~~~~~i~v~dl~tg~~~-~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 122 SLGTWAVSW---DGKKVAFAQKPNAADEAVLHVIDVDSGEWS-KVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp EEEEEEECT---TSSEEEEEEEETTCSCCEEEEEETTTCCBC-SSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred EEEEEEECC---CCCEEEEEECCCCCceEEEEEEECCCCCCc-CCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 366789999 999999972 257999999999865 2222222223679999999999999863
Q ss_pred -----cEEEEecCCCce--eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCC
Q 004067 191 -----ELHVLNLLINEQ--RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKS 263 (776)
Q Consensus 191 -----~l~~~~l~~g~~--~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 263 (776)
+||++++.+++. +.+...... ..+ +..+.|||||++|++.+.+..
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~-------~~~--------~~~~~~SpDG~~l~~~~~~~~------------- 249 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGD-------PTT--------FLQSDLSRDGKYLFVYILRGW------------- 249 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCC-------TTC--------EEEEEECTTSCCEEEEEEETT-------------
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCC-------CEE--------EEEEEECCCCCEEEEEEeCCC-------------
Confidence 299999998874 344333221 001 336789999999999875431
Q ss_pred CCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEE
Q 004067 264 SVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLK 343 (776)
Q Consensus 264 ~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~ 343 (776)
...+|++++..+++.+.+... ......+.| +||+ +++.++++.....|++
T Consensus 250 -------------------~~~~l~~~~~~~~~~~~l~~~---------~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~ 299 (695)
T 2bkl_A 250 -------------------SENDVYWKRPGEKDFRLLVKG---------VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFE 299 (695)
T ss_dssp -------------------TEEEEEEECTTCSSCEEEEEC---------SSCCEEEEE-ETTE-EEEEECTTCTTCEEEE
T ss_pred -------------------CceEEEEEcCCCCceEEeecC---------CCceEEEEe-cCCc-EEEEECCCCCCCEEEE
Confidence 125788998878887777432 223345556 8888 8888776656788999
Q ss_pred EECCCCce---EEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccC-CeEEEEEE
Q 004067 344 FDIKTGQR---KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG-DWMVEQIV 419 (776)
Q Consensus 344 ~d~~~g~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~-~~~~~~~~ 419 (776)
+|+++++. +.++.+.....+.. +++.++.+++....++..+|++++++|+..+.++.. ...+..+
T Consensus 300 ~d~~~~~~~~~~~l~~~~~~~~l~~----------~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~- 368 (695)
T 2bkl_A 300 VDPAKPARASWKEIVPEDSSASLLS----------VSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNL- 368 (695)
T ss_dssp EBTTBCSGGGCEEEECCCSSCEEEE----------EEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCC-
T ss_pred EeCCCCCccCCeEEecCCCCCeEEE----------EEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEe-
Confidence 99988763 66665432211110 133466788888888999999999988777777654 3334433
Q ss_pred eecCCCcEEEEEEcc-CCCceeeEEEEEeC
Q 004067 420 GVNEASGQVYFTGTL-DGPLESHLYCAKLY 448 (776)
Q Consensus 420 ~~s~dg~~i~~~~~~-~~~~~~~l~~~~~~ 448 (776)
.+++|++.++|..+. ..| ..+|.+++.
T Consensus 369 ~~s~d~~~l~~~~ss~~~P--~~v~~~d~~ 396 (695)
T 2bkl_A 369 MGLEDLDDAYYVFTSFTTP--RQIYKTSVS 396 (695)
T ss_dssp BSCTTCSEEEEEEEETTEE--EEEEEEETT
T ss_pred ecCCCCCEEEEEEcCCCCC--CEEEEEECC
Confidence 488999988888654 333 578888873
No 226
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.70 E-value=4.9e-15 Score=155.20 Aligned_cols=282 Identities=9% Similarity=0.028 Sum_probs=177.1
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEE--eecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQEL--VFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~--l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
+..++|||||++||..+.+ ..|.+|++++++... .... .+...+....|+|
T Consensus 19 v~~l~~sp~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~----------------------~h~~~v~~~~~sp 71 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSE----------------------GHQRTVRKVAWSP 71 (345)
T ss_dssp EEEEEECTTSSCEEEEETT-----SCEEEEEEETTEEEEEEEECS----------------------SCSSCEEEEEECT
T ss_pred EEEEEECCCCCEEEEEcCC-----CeEEEEEcCCCcceeeeeecc----------------------ccCCcEEEEEECC
Confidence 3678999999999966543 469999998876321 2110 0124688999999
Q ss_pred cCCCceEEEEe-CCCcEEEEeCCCCccc--eecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeE-Eee-C
Q 004067 135 TSSKKKIIMVP-LPDGIYFQDLSCSKPE--LKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQ-LTH-G 208 (776)
Q Consensus 135 ~~~dg~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~-lt~-~ 208 (776)
||++|+.. .++.+.+||+.++... ..+.... ..+..++|+|||+.|+..+. +.|.+|++.++.... +.. .
T Consensus 72 ---~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~-~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 147 (345)
T 3fm0_A 72 ---CGNYLASASFDATTCIWKKNQDDFECVTTLEGHE-NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN 147 (345)
T ss_dssp ---TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS-SCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC
T ss_pred ---CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC-CCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec
Confidence 99999976 6889999999877533 1344333 34788999999999998875 579999998764322 211 1
Q ss_pred CCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEE
Q 004067 209 ANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 288 (776)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~ 288 (776)
+.. ..+..+.|+|||+.|+..+.+ ..|.
T Consensus 148 ~h~----------------~~v~~~~~~p~~~~l~s~s~d------------------------------------~~i~ 175 (345)
T 3fm0_A 148 SHT----------------QDVKHVVWHPSQELLASASYD------------------------------------DTVK 175 (345)
T ss_dssp CCC----------------SCEEEEEECSSSSCEEEEETT------------------------------------SCEE
T ss_pred CcC----------------CCeEEEEECCCCCEEEEEeCC------------------------------------CcEE
Confidence 110 114578899999998877643 2368
Q ss_pred EEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCc-------------eEEEE
Q 004067 289 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-------------RKVIL 355 (776)
Q Consensus 289 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~-------------~~~l~ 355 (776)
+||..+++...+..- ..+...+..++|+|||+.|+..+ .+..|.+||...+. .+.+.
T Consensus 176 ~w~~~~~~~~~~~~~------~~h~~~v~~l~~sp~g~~l~s~s----~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 176 LYREEEDDWVCCATL------EGHESTVWSLAFDPSGQRLASCS----DDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp EEEEETTEEEEEEEE------CCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred EEEecCCCEEEEEEe------cCCCCceEEEEECCCCCEEEEEe----CCCeEEEeccccCCCCccceeeccCCccceeE
Confidence 888887764332221 46677899999999999887766 34457777752211 11111
Q ss_pred Ee----ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee----------eccccCCeEEEEEEee
Q 004067 356 VE----ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL----------GPITEGDWMVEQIVGV 421 (776)
Q Consensus 356 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~----------~~lt~~~~~~~~~~~~ 421 (776)
.- ....+.. .|++ .+..++++..++ .|.+|+.+.+.. ..+..+...+..+. |
T Consensus 246 ~~~~~h~~~v~~v---~~~~--------~~~~l~s~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~-~ 311 (345)
T 3fm0_A 246 TLSGFHSRTIYDI---AWCQ--------LTGALATACGDD--AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA-W 311 (345)
T ss_dssp EECSSCSSCEEEE---EECT--------TTCCEEEEETTS--CEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEE-E
T ss_pred EecCCCCCcEEEE---EEec--------CCCEEEEEeCCC--eEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeE-E
Confidence 11 1111110 1222 223445555566 566666544321 11123444566654 9
Q ss_pred cCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 422 NEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 422 s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
+|++..++++++.++. +.||++..
T Consensus 312 ~p~~~~~laS~s~Dg~--v~~W~~~~ 335 (345)
T 3fm0_A 312 NPKEPGLLASCSDDGE--VAFWKYQR 335 (345)
T ss_dssp CSSSTTEEEEEETTSC--EEEEEECC
T ss_pred eCCCceEEEEcCCCCc--EEEEEecC
Confidence 9998656777766654 88998873
No 227
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.70 E-value=4.2e-17 Score=166.90 Aligned_cols=214 Identities=12% Similarity=0.017 Sum_probs=142.8
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.+|..+++..+.+ .|+||++||.+++.. .| ..++..|++ +|.|+++|+||+|.+......
T Consensus 15 ~~g~~l~~~~~g~---------~~~vv~lHG~~~~~~---~~----~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~--- 74 (297)
T 2qvb_A 15 IAGKRMAYIDEGK---------GDAIVFQHGNPTSSY---LW----RNIMPHLEG-LGRLVACDLIGMGASDKLSPS--- 74 (297)
T ss_dssp ETTEEEEEEEESS---------SSEEEEECCTTCCGG---GG----TTTGGGGTT-SSEEEEECCTTSTTSCCCSSC---
T ss_pred ECCEEEEEEecCC---------CCeEEEECCCCchHH---HH----HHHHHHHhh-cCeEEEEcCCCCCCCCCCCCc---
Confidence 3788888887642 278999999877654 23 334566665 499999999999988643110
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCC-CcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCC---ccccccc------
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKV-GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGYDTF------ 681 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~-~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~---~~~~~~~------ 681 (776)
.......+++.+.+..+++.. +. +++.++||||||.+++.++.++|++++++|+.+|... +......
T Consensus 75 -~~~~~~~~~~~~~~~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 151 (297)
T 2qvb_A 75 -GPDRYSYGEQRDFLFALWDAL--DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQ 151 (297)
T ss_dssp -STTSSCHHHHHHHHHHHHHHT--TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred -cccCcCHHHHHHHHHHHHHHc--CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHH
Confidence 011134566666666555543 34 6899999999999999999999999999999887653 1100000
Q ss_pred ----------------cccccc----CCCCC----------------Cc----cchhc--------------CChhhhhc
Q 004067 682 ----------------YTEKYM----GLPSE----------------DP----VGYEY--------------SSVMHHVH 707 (776)
Q Consensus 682 ----------------~~~~~~----~~~~~----------------~~----~~~~~--------------~~~~~~~~ 707 (776)
+...+. ..... .. ..+.. .+....+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (297)
T 2qvb_A 152 GFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLE 231 (297)
T ss_dssp HHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHH
T ss_pred HHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcc
Confidence 000000 00000 00 00000 01133456
Q ss_pred cCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 708 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 708 ~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
++++|+|+++|++|..+++.....+.+.+ .+ +++++ ++||.+ ..+..+++.+.+.+||+++
T Consensus 232 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~-~~~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 232 ETDMPKLFINAEPGAIITGRIRDYVRSWP----NQ-TEITV-PGVHFV-QEDSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp HCCSCEEEEEEEECSSSCHHHHHHHHTSS----SE-EEEEE-EESSCG-GGTCHHHHHHHHHHHHHHH
T ss_pred cccccEEEEecCCCCcCCHHHHHHHHHHc----CC-eEEEe-cCccch-hhhCHHHHHHHHHHHHHHH
Confidence 78899999999999999988777776544 34 88889 999986 5677889999999999864
No 228
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.70 E-value=5.6e-17 Score=162.95 Aligned_cols=211 Identities=12% Similarity=0.084 Sum_probs=137.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 612 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~ 612 (776)
+|.++++..+.+++ .|+||++||.+++.. .|..++..|++ +|.|+++|+||+|.|....
T Consensus 7 ~g~~l~~~~~g~~~-------~~~vv~lHG~~~~~~-------~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~------ 65 (264)
T 3ibt_A 7 NGTLMTYSESGDPH-------APTLFLLSGWCQDHR-------LFKNLAPLLAR-DFHVICPDWRGHDAKQTDS------ 65 (264)
T ss_dssp TTEECCEEEESCSS-------SCEEEEECCTTCCGG-------GGTTHHHHHTT-TSEEEEECCTTCSTTCCCC------
T ss_pred CCeEEEEEEeCCCC-------CCeEEEEcCCCCcHh-------HHHHHHHHHHh-cCcEEEEccccCCCCCCCc------
Confidence 67778877776532 378999999877654 23445677755 5999999999999887531
Q ss_pred ccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-CCceEEEEEcCCCCCccc--------------
Q 004067 613 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG-------------- 677 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-~~~~~~~v~~~~~~~~~~-------------- 677 (776)
.....+++.+.+..+.+.. +.+++.++||||||.+++.+|.++ |++++++|+.+|......
T Consensus 66 --~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 141 (264)
T 3ibt_A 66 --GDFDSQTLAQDLLAFIDAK--GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTE 141 (264)
T ss_dssp --SCCCHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTT
T ss_pred --cccCHHHHHHHHHHHHHhc--CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhh
Confidence 1234556666665555543 345899999999999999999999 999999999987651100
Q ss_pred ---ccccccccccCCCCC--------------Cccchh------------cCChhhhhccCCCcEEEEecCCCCcc--Ch
Q 004067 678 ---YDTFYTEKYMGLPSE--------------DPVGYE------------YSSVMHHVHKMKGKLLLVHGMIDENV--HF 726 (776)
Q Consensus 678 ---~~~~~~~~~~~~~~~--------------~~~~~~------------~~~~~~~~~~i~~P~lii~G~~D~~v--~~ 726 (776)
........++..... ....+. ..+....+.++++|+|+++|..|... ++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~ 221 (264)
T 3ibt_A 142 YVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYR 221 (264)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHH
T ss_pred HHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhH
Confidence 000000001000000 000000 01122556788999999987544433 34
Q ss_pred HHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 727 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 727 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
.....+.+ ...+.++++++++||.+ ..+.++++.+.+.+||+
T Consensus 222 ~~~~~~~~----~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 222 QLQLEFAA----GHSWFHPRHIPGRTHFP-SLENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHHHHHH----HCTTEEEEECCCSSSCH-HHHCHHHHHHHHHHHTC
T ss_pred HHHHHHHH----hCCCceEEEcCCCCCcc-hhhCHHHHHHHHHHHHh
Confidence 43444433 34678999999999976 55678889999999985
No 229
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.70 E-value=5.6e-16 Score=147.34 Aligned_cols=181 Identities=10% Similarity=0.009 Sum_probs=121.5
Q ss_pred ceEEEEEcCCCCcccccccccccchhhh-HHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
.|+||++||.+++.. ..| .... ..|++.||.|+++|+|.+ ... ...++.+.+..+.+.
T Consensus 4 ~p~vv~~HG~~~~~~--~~~----~~~~~~~l~~~g~~v~~~d~~~~---~~~------------~~~~~~~~~~~~~~~ 62 (192)
T 1uxo_A 4 TKQVYIIHGYRASST--NHW----FPWLKKRLLADGVQADILNMPNP---LQP------------RLEDWLDTLSLYQHT 62 (192)
T ss_dssp CCEEEEECCTTCCTT--STT----HHHHHHHHHHTTCEEEEECCSCT---TSC------------CHHHHHHHHHTTGGG
T ss_pred CCEEEEEcCCCCCcc--hhH----HHHHHHHHHhCCcEEEEecCCCC---CCC------------CHHHHHHHHHHHHHh
Confidence 478999999766532 122 2223 468789999999999922 111 244455544444433
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhCCC--ceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCC
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK 710 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 710 (776)
. ..+++++||||||.+++.++.++|+ +++++++.+|........... ..+...+ .....+.+++
T Consensus 63 ~---~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~ 128 (192)
T 1uxo_A 63 L---HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQML-DEFTQGS----------FDHQKIIESA 128 (192)
T ss_dssp C---CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGG-GGGTCSC----------CCHHHHHHHE
T ss_pred c---cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchhh-hhhhhcC----------CCHHHHHhhc
Confidence 2 4689999999999999999999999 999999998875432110000 1111111 1123456677
Q ss_pred CcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCC--CcHHHHHHHHHHHHHH
Q 004067 711 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIER 774 (776)
Q Consensus 711 ~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~fl~~ 774 (776)
+|+|+++|++|..+++..+..+.+.+ +.+++++++++|.+... ....++.+.+.+|+.+
T Consensus 129 ~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 129 KHRAVIASKDDQIVPFSFSKDLAQQI-----DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp EEEEEEEETTCSSSCHHHHHHHHHHT-----TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CCEEEEecCCCCcCCHHHHHHHHHhc-----CceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 89999999999999999888887765 45899999999987322 2234456666666653
No 230
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.70 E-value=1.2e-14 Score=157.00 Aligned_cols=291 Identities=10% Similarity=0.006 Sum_probs=188.3
Q ss_pred ceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCC
Q 004067 59 SIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSK 138 (776)
Q Consensus 59 ~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~d 138 (776)
...|+|||++|+..+.. ..|.+||+.+++...+... +...+....|+| |
T Consensus 102 ~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~-----------------------h~~~v~~~~~~~---~ 150 (420)
T 3vl1_A 102 VDTAKLQMRRFILGTTE-----GDIKVLDSNFNLQREIDQA-----------------------HVSEITKLKFFP---S 150 (420)
T ss_dssp EEEECSSSCEEEEEETT-----SCEEEECTTSCEEEEETTS-----------------------SSSCEEEEEECT---T
T ss_pred EEEEecCCCEEEEEECC-----CCEEEEeCCCcceeeeccc-----------------------ccCccEEEEECC---C
Confidence 44789999999976653 3699999998887665421 124788999999 9
Q ss_pred ceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCC--Cce
Q 004067 139 KKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANG--NTV 214 (776)
Q Consensus 139 g~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~--~~~ 214 (776)
|+.|+.. .++.|++||+.+++....+..... .+..+.|+|||+.|+..+. +.|.+|++.+++.......... ..+
T Consensus 151 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 151 GEALISSSQDMQLKIWSVKDGSNPRTLIGHRA-TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp SSEEEEEETTSEEEEEETTTCCCCEEEECCSS-CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred CCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC-cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCc
Confidence 9988876 678899999998877645554443 4888999999999998775 5699999998876554332111 000
Q ss_pred ec-----CCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEE
Q 004067 215 TH-----GLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 289 (776)
Q Consensus 215 ~~-----~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~ 289 (776)
.. +............+..+.|+|||+.|+....+ ..|.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------------------------------------g~i~i 273 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS------------------------------------GVITV 273 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT------------------------------------SCEEE
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC------------------------------------CeEEE
Confidence 00 00000000011234567799999988776533 23799
Q ss_pred EEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCCCce--EEEEEeccCceeecc
Q 004067 290 VSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQR--KVILVEELDSWVNLH 366 (776)
Q Consensus 290 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~~~~~~~~ 366 (776)
||+.+++...... ..+...+..++|+|||+ .++... .+..|++||+.++.. ..+..+.......
T Consensus 274 ~d~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~g~----~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~-- 340 (420)
T 3vl1_A 274 HNVFSKEQTIQLP-------SKFTCSCNSLTVDGNNANYIYAGY----ENGMLAQWDLRSPECPVGEFLINEGTPINN-- 340 (420)
T ss_dssp EETTTCCEEEEEC-------CTTSSCEEEEEECSSCTTEEEEEE----TTSEEEEEETTCTTSCSEEEEESTTSCEEE--
T ss_pred EECCCCceeEEcc-------cccCCCceeEEEeCCCCCEEEEEe----CCCeEEEEEcCCCcCchhhhhccCCCCceE--
Confidence 9998877544322 34567799999999998 776655 445799999988753 4444433221111
Q ss_pred cccccCCCCccccCCeEEEEeccCCceEEEEEeCCCc----------eeeccccCCeEEEEEEeecCCCc---EEEEEEc
Q 004067 367 DCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGT----------CLGPITEGDWMVEQIVGVNEASG---QVYFTGT 433 (776)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~----------~~~~lt~~~~~~~~~~~~s~dg~---~i~~~~~ 433 (776)
. .+.++.++++...+| .|.+|++... ....+......+..+. |+++++ .++..+.
T Consensus 341 -~--------~~~~~~~l~s~~~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 341 -V--------YFAAGALFVSSGFDT--SIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFC-YVSDDESNGEVLEVGK 408 (420)
T ss_dssp -E--------EEETTEEEEEETTTE--EEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEE-EECCSSSSCEEEEEET
T ss_pred -E--------EeCCCCEEEEecCCc--cEEEEeccCCCCCccceeccCccEEccCCcceEEEE-EccCCCCcceEEEEcC
Confidence 1 112455666776677 7888886552 1222333333445554 899998 7777765
Q ss_pred cCCCceeeEEEE
Q 004067 434 LDGPLESHLYCA 445 (776)
Q Consensus 434 ~~~~~~~~l~~~ 445 (776)
.+ ...+|.+
T Consensus 409 ~g---~~~~~~~ 417 (420)
T 3vl1_A 409 NN---FCALYNL 417 (420)
T ss_dssp TT---EEEEEES
T ss_pred Cc---eEEEEec
Confidence 43 2566654
No 231
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.70 E-value=3.4e-16 Score=164.75 Aligned_cols=283 Identities=11% Similarity=0.017 Sum_probs=174.0
Q ss_pred CCeeeEEEeecCCCceEEEEeC-------CCcEEEEeCCCCccceec----CCCCCCCccCceeCCCCCEEEEEECCcEE
Q 004067 125 LGVTRYEWVKTSSKKKIIMVPL-------PDGIYFQDLSCSKPELKL----SSSSCSPVIDPHLSSDGTMIAFVRDCELH 193 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~~-------~~~l~~~d~~~~~~~~~l----~~~~~~~~~~~~~SpDg~~la~~~~~~l~ 193 (776)
..+.+..||| ||++|+... ++.|++|+..++.....+ ..... .+..++|+||++.++-..++.|.
T Consensus 43 ~~V~~v~fSp---DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~-~V~~~~~s~d~~~l~~s~dg~v~ 118 (357)
T 4g56_B 43 VQIGAVRYRR---DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA-GVTDVAWVSEKGILVASDSGAVE 118 (357)
T ss_dssp SEEEEEEECS---SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS-CEEEEEEETTTEEEEEETTSCEE
T ss_pred CCEEEEEECC---CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC-CEEEEEEcCCCCEEEEECCCEEE
Confidence 4688999999 999999873 567999998877644122 11222 37789999999877666667899
Q ss_pred EEecCCCceeEE---eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCc
Q 004067 194 VLNLLINEQRQL---THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQ 270 (776)
Q Consensus 194 ~~~l~~g~~~~l---t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (776)
+||+.+++.... ...+. -..+..++|+|||+.|+....+
T Consensus 119 lWd~~~~~~~~~~~~~~~~h----------------~~~V~~v~~spdg~~l~sgs~d---------------------- 160 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEH----------------DDIVKTLSVFSDGTQAVSGGKD---------------------- 160 (357)
T ss_dssp EC--------CCCCEEECCC----------------SSCEEEEEECSSSSEEEEEETT----------------------
T ss_pred EeeccccceeEEEeeccCCC----------------CCCEEEEEECCCCCEEEEEeCC----------------------
Confidence 999988764321 11111 1125578999999999876643
Q ss_pred ceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCCC
Q 004067 271 EDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTG 349 (776)
Q Consensus 271 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~g 349 (776)
..|.+||+.+++....- ..+...+..++|+|+++ .++... .+..|.+||+.++
T Consensus 161 --------------g~v~iwd~~~~~~~~~~--------~~h~~~v~~v~~s~~~~~~~~s~~----~dg~v~~wd~~~~ 214 (357)
T 4g56_B 161 --------------FSVKVWDLSQKAVLKSY--------NAHSSEVNCVAACPGKDTIFLSCG----EDGRILLWDTRKP 214 (357)
T ss_dssp --------------SCEEEEETTTTEEEEEE--------CCCSSCEEEEEECTTCSSCEEEEE----TTSCEEECCTTSS
T ss_pred --------------CeEEEEECCCCcEEEEE--------cCCCCCEEEEEEccCCCceeeeec----cCCceEEEECCCC
Confidence 23789999988765431 45667789999999987 444443 3446999999887
Q ss_pred ceEEEEEe-ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcE
Q 004067 350 QRKVILVE-ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQ 427 (776)
Q Consensus 350 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~ 427 (776)
+....... ...... ..-.|+| +++.++.+...++ .|++||+.+++ .+.+..+...+..+. |+|+++.
T Consensus 215 ~~~~~~~~~~~~~~v-~~v~~sp-------~~~~~la~g~~d~--~i~~wd~~~~~~~~~~~~~~~~v~~l~-~sp~~~~ 283 (357)
T 4g56_B 215 KPATRIDFCASDTIP-TSVTWHP-------EKDDTFACGDETG--NVSLVNIKNPDSAQTSAVHSQNITGLA-YSYHSSP 283 (357)
T ss_dssp SCBCBCCCTTCCSCE-EEEEECT-------TSTTEEEEEESSS--CEEEEESSCGGGCEEECCCSSCEEEEE-ECSSSSC
T ss_pred ceeeeeeeccccccc-cchhhhh-------cccceEEEeeccc--ceeEEECCCCcEeEEEeccceeEEEEE-EcCCCCC
Confidence 65432221 111110 0011222 2344666666666 79999987665 344555555566654 9999977
Q ss_pred EEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC-CCeEEEEEcC-CcCEEEEEeeCCCCCCEEEEEEcCCC
Q 004067 428 VYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGKHVAVLDH-NMRNFVDFHDSLDSPPRILLCSLQDG 500 (776)
Q Consensus 428 i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~~~i~~~~~~~~ 500 (776)
+++++..++. +.||.++ .+ ++.+...+ ..+..++||| |++.|+... .+. .|.+|++...
T Consensus 284 ~lasgs~D~~--i~iwd~~---~~-----~~~~~~~H~~~V~~vafsP~d~~~l~s~s-~Dg---~v~iW~~~~~ 344 (357)
T 4g56_B 284 FLASISEDCT--VAVLDAD---FS-----EVFRDLSHRDFVTGVAWSPLDHSKFTTVG-WDH---KVLHHHLPSE 344 (357)
T ss_dssp CEEEEETTSC--EEEECTT---SC-----EEEEECCCSSCEEEEEECSSSTTEEEEEE-TTS---CEEEEECC--
T ss_pred EEEEEeCCCE--EEEEECC---CC-----cEeEECCCCCCEEEEEEeCCCCCEEEEEc-CCC---eEEEEECCCC
Confidence 7777666654 6777554 22 23333333 3577899999 787776543 333 5888887543
No 232
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.70 E-value=2.8e-17 Score=173.19 Aligned_cols=213 Identities=12% Similarity=0.096 Sum_probs=132.8
Q ss_pred CceEEEEEcCCCCcccccc--cccc-------cchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh--hccC-CccHH
Q 004067 553 PYKTLISVYGGPCVQLVCD--SWIN-------TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK--HNCG-RIDAE 620 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~--~~~~-------~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~--~~~~-~~~~~ 620 (776)
+.|+||++||.+++..... .|.. .+..++..|+++||.|+++|+||+|.+......... ..+. ....+
T Consensus 49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 128 (354)
T 2rau_A 49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWIS 128 (354)
T ss_dssp CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHH
T ss_pred CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHHH
Confidence 4589999999877653211 2220 011457888999999999999999987532211000 0010 11256
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-CCceEEEEEcCCCCCcc----cc--------ccc------
Q 004067 621 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWD----GY--------DTF------ 681 (776)
Q Consensus 621 D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-~~~~~~~v~~~~~~~~~----~~--------~~~------ 681 (776)
|+.++++++.++. +.++++++||||||.+++.++.++ |++++++|+.++..... .. ...
T Consensus 129 d~~~~~~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (354)
T 2rau_A 129 DIKEVVSFIKRDS--GQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIY 206 (354)
T ss_dssp HHHHHHHHHHHHH--CCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCC
T ss_pred HHHHHHHHHHHhc--CCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhccc
Confidence 7888888877652 446899999999999999999998 99999999985532110 00 000
Q ss_pred -----------------cccc-------------------c---cCCCCC----Cccch----------------hcCCh
Q 004067 682 -----------------YTEK-------------------Y---MGLPSE----DPVGY----------------EYSSV 702 (776)
Q Consensus 682 -----------------~~~~-------------------~---~~~~~~----~~~~~----------------~~~~~ 702 (776)
+... + ...+.. ....+ ...+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (354)
T 2rau_A 207 VIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDL 286 (354)
T ss_dssp EEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTC
T ss_pred ccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCccc
Confidence 0000 0 000000 00000 00112
Q ss_pred hhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCC--CCCcHHHHHHHHHHHHHHh
Q 004067 703 MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR--RHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 703 ~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~--~~~~~~~~~~~~~~fl~~~ 775 (776)
...+.++++|+|+++|++|.++|. .+ +.+ ..+.++++++++||... .++..+++.+.+.+||+++
T Consensus 287 ~~~l~~i~~P~Lii~G~~D~~~p~-~~----~~l---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 287 KFDYEGILVPTIAFVSERFGIQIF-DS----KIL---PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp CCCCTTCCCCEEEEEETTTHHHHB-CG----GGS---CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred ccccccCCCCEEEEecCCCCCCcc-ch----hhh---ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 223458889999999999987653 22 222 35679999999999762 3455689999999999875
No 233
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.69 E-value=3.6e-15 Score=155.49 Aligned_cols=263 Identities=10% Similarity=0.051 Sum_probs=164.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|++..... ..|++||+.+++..........+ .....+..+.|+|
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~s~-- 91 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS----ESLVKIDLVTGETLGRIDLSTPE------------------ERVKSLFGAALSP-- 91 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT----TEEEEEETTTCCEEEEEECCBTT------------------EEEECTTCEEECT--
T ss_pred ccceEEcCCCCEEEEEeCCC----CeEEEEECCCCCeEeeEEcCCcc------------------cccccccceEECC--
Confidence 58899999999988776543 47999999998875433211000 0001355788999
Q ss_pred CCceEEEEe-------------CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCcee
Q 004067 137 SKKKIIMVP-------------LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINEQR 203 (776)
Q Consensus 137 ~dg~~l~~~-------------~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~~~ 203 (776)
||++|++. .++.|++||+++++....+... .....+.|||||+.|++. +++|+++++++++..
T Consensus 92 -dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 92 -DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGL-GRDLHVMDPEAGTLV 167 (337)
T ss_dssp -TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEE-SSSEEEEETTTTEEE
T ss_pred -CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEe-CCeEEEEECCCCcEe
Confidence 99999988 3689999999988776344332 236778999999988777 788999999999876
Q ss_pred EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCC-eEEEeecCCCCCCCCCcceecCCCCCCCC
Q 004067 204 QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIP-RFRIMHQGKSSVGSEAQEDHAYPFAGASN 282 (776)
Q Consensus 204 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 282 (776)
.....+.. .....|+|||+.|++......... .+...........+ ..
T Consensus 168 ~~~~~~~~------------------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 216 (337)
T 1pby_B 168 EDKPIQSW------------------EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP-------------TA 216 (337)
T ss_dssp EEECSTTT------------------TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG-------------GG
T ss_pred eeeecccc------------------CCCceeCCCccEEeeeccCCCceeeeeeccccccccccc-------------cc
Confidence 54332220 012358999998765432211100 01111000000000 01
Q ss_pred CeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCce
Q 004067 283 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 362 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 362 (776)
....|++||+++++...+... ........++|||||+.++.. ...|++||+++++...........+
T Consensus 217 ~~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~~~s~dg~~l~~~------~~~v~~~d~~~~~~~~~~~~~~~~~ 283 (337)
T 1pby_B 217 YRTGLLTMDLETGEMAMREVR-------IMDVFYFSTAVNPAKTRAFGA------YNVLESFDLEKNASIKRVPLPHSYY 283 (337)
T ss_dssp EEEEEEEEETTTCCEEEEEEE-------ECSSCEEEEEECTTSSEEEEE------ESEEEEEETTTTEEEEEEECSSCCC
T ss_pred cccceEEEeCCCCCceEeecC-------CCCCceeeEEECCCCCEEEEe------CCeEEEEECCCCcCcceecCCCcee
Confidence 224799999999988755442 233456679999999977766 2469999999987654443221111
Q ss_pred eecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce
Q 004067 363 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC 404 (776)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~ 404 (776)
. ..|+| ++..++++..++ .|++|++++++
T Consensus 284 ~---~~~s~--------dg~~l~~~~~~~--~i~v~d~~~~~ 312 (337)
T 1pby_B 284 S---VNVST--------DGSTVWLGGALG--DLAAYDAETLE 312 (337)
T ss_dssp E---EEECT--------TSCEEEEESBSS--EEEEEETTTCC
T ss_pred e---EEECC--------CCCEEEEEcCCC--cEEEEECcCCc
Confidence 1 11222 233455554444 89999987765
No 234
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.69 E-value=2.2e-14 Score=150.78 Aligned_cols=276 Identities=13% Similarity=0.062 Sum_probs=183.2
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+-.+.+ ..|.+||..+++........ ...+....|+|
T Consensus 67 V~~~~~s~d~~~l~s~s~D-----g~v~vWd~~~~~~~~~~~~~-----------------------~~~v~~~~~sp-- 116 (354)
T 2pbi_B 67 VLCMDWCKDKRRIVSSSQD-----GKVIVWDSFTTNKEHAVTMP-----------------------CTWVMACAYAP-- 116 (354)
T ss_dssp EEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECS-----------------------SSCCCEEEECT--
T ss_pred EEEEEECCCCCEEEEEeCC-----CeEEEEECCCCCcceEEecC-----------------------CCCEEEEEECC--
Confidence 5789999999999865542 46999999887764433211 13577899999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccc------eecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeC
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPE------LKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHG 208 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~------~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~ 208 (776)
||+.|+.. .++.+.+|++...... ..+..+. ..+....|+||++.|+..+. +.|.+||+.+++.......
T Consensus 117 -~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~ 194 (354)
T 2pbi_B 117 -SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHT-NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG 194 (354)
T ss_dssp -TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECS-SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred -CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccC-CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC
Confidence 99999987 6778999988654211 1222222 24678899999999888775 5799999999876543332
Q ss_pred CCCCceecCCcccceecccCCcceEEECC--CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEE
Q 004067 209 ANGNTVTHGLAEYIAQEEMDRKTGYWWSL--DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVR 286 (776)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 286 (776)
... .+..+.|+| +|+.|+..+.+ ..
T Consensus 195 h~~-----------------~v~~~~~~~~~~g~~l~sgs~D------------------------------------g~ 221 (354)
T 2pbi_B 195 HGA-----------------DVLCLDLAPSETGNTFVSGGCD------------------------------------KK 221 (354)
T ss_dssp CSS-----------------CEEEEEECCCSSCCEEEEEETT------------------------------------SC
T ss_pred CCC-----------------CeEEEEEEeCCCCCEEEEEeCC------------------------------------Ce
Confidence 211 133566766 57777766543 24
Q ss_pred EEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecc
Q 004067 287 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 366 (776)
Q Consensus 287 l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 366 (776)
|.+||+.+++....- ..+...+..++|+|||+.++..+ .+..|.+||+.++....+............
T Consensus 222 v~~wd~~~~~~~~~~--------~~h~~~v~~v~~~p~~~~l~s~s----~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAF--------ETHESDVNSVRYYPSGDAFASGS----DDATCRLYDLRADREVAIYSKESIIFGASS 289 (354)
T ss_dssp EEEEETTTCCEEEEE--------CCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred EEEEECCCCcEEEEe--------cCCCCCeEEEEEeCCCCEEEEEe----CCCeEEEEECCCCcEEEEEcCCCcccceeE
Confidence 799999988765431 45667899999999999877665 345699999988765444432211110011
Q ss_pred cccccCCCCccccCCeEEEEeccCCceEEEEEeCCCc-eeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEE
Q 004067 367 DCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 443 (776)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~-~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~ 443 (776)
-.|+| ++.++++...++ .|.+||+..+ ....+..+...+..+. |+|||+.|+.. +.++ .+.||
T Consensus 290 ~~~s~--------~g~~l~~g~~d~--~i~vwd~~~~~~~~~l~~h~~~v~~l~-~spdg~~l~sg-s~D~--~v~vW 353 (354)
T 2pbi_B 290 VDFSL--------SGRLLFAGYNDY--TINVWDVLKGSRVSILFGHENRVSTLR-VSPDGTAFCSG-SWDH--TLRVW 353 (354)
T ss_dssp EEECT--------TSSEEEEEETTS--CEEEEETTTCSEEEEECCCSSCEEEEE-ECTTSSCEEEE-ETTS--EEEEE
T ss_pred EEEeC--------CCCEEEEEECCC--cEEEEECCCCceEEEEECCCCcEEEEE-ECCCCCEEEEE-cCCC--CEEec
Confidence 12333 344666666677 8999997554 4556666666676665 99999965544 4443 36666
No 235
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.69 E-value=5.6e-15 Score=153.83 Aligned_cols=251 Identities=8% Similarity=0.096 Sum_probs=157.8
Q ss_pred ceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCce-EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeee-EEEeecC
Q 004067 59 SIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQ-ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTR-YEWVKTS 136 (776)
Q Consensus 59 ~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~sp~~ 136 (776)
.++|||||++|+...... ..|+++|+++++. ...... +..... +.|+|
T Consensus 44 ~~~~s~dg~~l~~~~~~~----~~i~~~d~~~~~~~~~~~~~------------------------~~~~~~~~~~s~-- 93 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFC----QTLVQIETQLEPPKVVAIQE------------------------GQSSMADVDITP-- 93 (331)
T ss_dssp EEEECSSSCEEEEEESTT----CEEEEEECSSSSCEEEEEEE------------------------CSSCCCCEEECT--
T ss_pred eEEEcCCCCEEEEEeCCC----CeEEEEECCCCceeEEeccc------------------------CCCCccceEECC--
Confidence 889999999888776644 4799999999885 333221 123444 88999
Q ss_pred CCceEEEEeCCC----cEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC--Cc-EEEEecCCCce-e----E
Q 004067 137 SKKKIIMVPLPD----GIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CE-LHVLNLLINEQ-R----Q 204 (776)
Q Consensus 137 ~dg~~l~~~~~~----~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~-l~~~~l~~g~~-~----~ 204 (776)
||++|+..... .|++||+.+++....+... . ....+.|||||++|++... +. |++++++.... . +
T Consensus 94 -dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 94 -DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-Y-DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp -TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-T-TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred -CCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-C-CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 99999966444 7999999998876333332 2 3578999999998776643 56 88888774322 1 1
Q ss_pred EeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCe
Q 004067 205 LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVK 284 (776)
Q Consensus 205 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 284 (776)
....+. ....++|+|||+.|++.....
T Consensus 171 ~~~~~~------------------~~~~~~~spdg~~l~v~~~~~----------------------------------- 197 (331)
T 3u4y_A 171 FISGGT------------------RPFNITFTPDGNFAFVANLIG----------------------------------- 197 (331)
T ss_dssp EECSSS------------------SEEEEEECTTSSEEEEEETTT-----------------------------------
T ss_pred cccCCC------------------CccceEECCCCCEEEEEeCCC-----------------------------------
Confidence 111111 134788999999887765221
Q ss_pred EEEEEEEcCCCce----EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccC
Q 004067 285 VRLGVVSAAGGPV----SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD 360 (776)
Q Consensus 285 ~~l~~~d~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 360 (776)
..|.+||+++++. ..+. .......++|||||+.+++... ....|++||+++++.+.+......
T Consensus 198 ~~v~v~d~~~~~~~~~~~~~~----------~~~~~~~~~~spdg~~l~v~~~---~~~~i~~~d~~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 198 NSIGILETQNPENITLLNAVG----------TNNLPGTIVVSRDGSTVYVLTE---STVDVFNFNQLSGTLSFVKSFGHG 264 (331)
T ss_dssp TEEEEEECSSTTSCEEEEEEE----------CSSCCCCEEECTTSSEEEEECS---SEEEEEEEETTTTEEEEEEEEECC
T ss_pred CeEEEEECCCCcccceeeecc----------CCCCCceEEECCCCCEEEEEEc---CCCEEEEEECCCCceeeecccccc
Confidence 3588999988875 2232 1234456899999997766532 355699999999988665433221
Q ss_pred ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeecccc
Q 004067 361 SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITE 410 (776)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~ 410 (776)
........+....-.++.++..+++.+..++ .|.+|++++.....+..
T Consensus 265 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~~~~~~~~ 312 (331)
T 3u4y_A 265 LLIDPRPLFGANQMALNKTETKLFISANISR--ELKVFTISGKVVGYVAG 312 (331)
T ss_dssp CCCCCGGGTTCCCEEECTTSSEEEEEETTTT--EEEEEETTSCEEEECTT
T ss_pred cccCCCCcccccceEECCCCCEEEEecCCCC--cEEEEEecCCcccceec
Confidence 0000111110000011223333555555555 89999998776555543
No 236
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.69 E-value=5.8e-15 Score=159.32 Aligned_cols=275 Identities=9% Similarity=0.070 Sum_probs=184.6
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.+..++|||||++|+..+.. ..|.+|+..+.....+..+. ..+....|+|
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~------------------------~~v~~~~~~~- 159 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN-----GELRLWNKTGALLNVLNFHR------------------------APIVSVKWNK- 159 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEETTSCEEEEECCCC------------------------SCEEEEEECT-
T ss_pred ceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCeeeeccCCC------------------------ccEEEEEECC-
Confidence 46889999999999976553 35999996655555555432 3688999999
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCC---------------ccCceeCCCCCEEEEEECCcEEEEecCC
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSP---------------VIDPHLSSDGTMIAFVRDCELHVLNLLI 199 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~---------------~~~~~~SpDg~~la~~~~~~l~~~~l~~ 199 (776)
||+.|+.. .++.|++||+.+++....+.... .. +..+.|+|++..++...++.|+++++.+
T Consensus 160 --~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~ 236 (425)
T 1r5m_A 160 --DGTHIISMDVENVTILWNVISGTVMQHFELKE-TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE 236 (425)
T ss_dssp --TSSEEEEEETTCCEEEEETTTTEEEEEECCC----------------CCCBSCCEEEETTEEEEECGGGCEEEEETTC
T ss_pred --CCCEEEEEecCCeEEEEECCCCcEEEEeeccc-cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCC
Confidence 99998876 67899999999887663333222 22 6788999998755555567899999998
Q ss_pred CceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCC
Q 004067 200 NEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAG 279 (776)
Q Consensus 200 g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (776)
++.......... .+..+.|+||++.|+....+
T Consensus 237 ~~~~~~~~~~~~-----------------~i~~~~~~~~~~~l~~~~~d------------------------------- 268 (425)
T 1r5m_A 237 KTPTGKLIGHHG-----------------PISVLEFNDTNKLLLSASDD------------------------------- 268 (425)
T ss_dssp SSCSEEECCCSS-----------------CEEEEEEETTTTEEEEEETT-------------------------------
T ss_pred CceeeeeccCCC-----------------ceEEEEECCCCCEEEEEcCC-------------------------------
Confidence 866544322211 14578899999988876533
Q ss_pred CCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec-
Q 004067 280 ASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE- 358 (776)
Q Consensus 280 ~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~- 358 (776)
..|++||+.+++..... ..+...+..+.|+||| .++... .+..|.+||+.+++........
T Consensus 269 -----~~i~i~d~~~~~~~~~~--------~~~~~~i~~~~~~~~~-~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~ 330 (425)
T 1r5m_A 269 -----GTLRIWHGGNGNSQNCF--------YGHSQSIVSASWVGDD-KVISCS----MDGSVRLWSLKQNTLLALSIVDG 330 (425)
T ss_dssp -----SCEEEECSSSBSCSEEE--------CCCSSCEEEEEEETTT-EEEEEE----TTSEEEEEETTTTEEEEEEECTT
T ss_pred -----CEEEEEECCCCccceEe--------cCCCccEEEEEECCCC-EEEEEe----CCCcEEEEECCCCcEeEecccCC
Confidence 23789998877644331 3456678999999999 555554 3457999999988765544432
Q ss_pred cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce---------------------eeccccCCe--EE
Q 004067 359 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC---------------------LGPITEGDW--MV 415 (776)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~---------------------~~~lt~~~~--~~ 415 (776)
..... -.|+| ++.++++...+| .|++|++..++ ...+..+.. .+
T Consensus 331 ~~i~~---~~~s~--------~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 397 (425)
T 1r5m_A 331 VPIFA---GRISQ--------DGQKYAVAFMDG--QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYI 397 (425)
T ss_dssp CCEEE---EEECT--------TSSEEEEEETTS--CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCE
T ss_pred ccEEE---EEEcC--------CCCEEEEEECCC--eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCce
Confidence 22111 12333 234666666667 78888877654 344554433 56
Q ss_pred EEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 416 EQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 416 ~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
..+. |+++|+.|+..+. ++ .+.+|.++
T Consensus 398 ~~~~-~s~~~~~l~~~~~-dg--~i~iw~~~ 424 (425)
T 1r5m_A 398 FDLS-WNCAGNKISVAYS-LQ--EGSVVAIP 424 (425)
T ss_dssp EEEE-ECTTSSEEEEEES-SS--CCEEEECC
T ss_pred EEEE-ccCCCceEEEEec-Cc--eEEEEeec
Confidence 6654 9999997665544 33 26777653
No 237
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.69 E-value=1.1e-16 Score=160.31 Aligned_cols=191 Identities=17% Similarity=0.183 Sum_probs=126.6
Q ss_pred EEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCC
Q 004067 556 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 635 (776)
Q Consensus 556 ~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~i 635 (776)
.||++||.+++.. .|..++..|+ .+|.|+++|+||+|.|... ....++++. +.+.+. +
T Consensus 15 ~vvllHG~~~~~~-------~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~~~---~~l~~~--l 72 (258)
T 1m33_A 15 HLVLLHGWGLNAE-------VWRCIDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLADMA---EAVLQQ--A 72 (258)
T ss_dssp EEEEECCTTCCGG-------GGGGTHHHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHHHH---HHHHTT--S
T ss_pred eEEEECCCCCChH-------HHHHHHHHhh-cCcEEEEeeCCCCCCCCCC---------CCcCHHHHH---HHHHHH--h
Confidence 7899999776543 2344567776 4799999999999988643 112344433 344433 2
Q ss_pred CCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc------ccc----cc-----------ccccc-----CC
Q 004067 636 KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG------YDT----FY-----------TEKYM-----GL 689 (776)
Q Consensus 636 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~------~~~----~~-----------~~~~~-----~~ 689 (776)
+ +++.|+||||||.+++.+|.++|++++++|+.++...+.. ... .+ ...+. +.
T Consensus 73 ~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T 1m33_A 73 P-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGT 151 (258)
T ss_dssp C-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTS
T ss_pred C-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCC
Confidence 3 6899999999999999999999999999998776432110 000 00 00000 00
Q ss_pred CC-----------------CCcc-------chhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEE
Q 004067 690 PS-----------------EDPV-------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 745 (776)
Q Consensus 690 ~~-----------------~~~~-------~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 745 (776)
+. .... .+...+....+.++++|+|+++|++|..+++..+..+.+. -.+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~----~~~~~~ 227 (258)
T 1m33_A 152 ETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKL----WPHSES 227 (258)
T ss_dssp TTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTT----CTTCEE
T ss_pred ccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHh----CccceE
Confidence 00 0000 0011122234567889999999999999998766655443 356789
Q ss_pred EEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 746 LIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 746 ~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
++++++||.+ ..+.++++.+.+.+|+.+
T Consensus 228 ~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 228 YIFAKAAHAP-FISHPAEFCHLLVALKQR 255 (258)
T ss_dssp EEETTCCSCH-HHHSHHHHHHHHHHHHTT
T ss_pred EEeCCCCCCc-cccCHHHHHHHHHHHHHh
Confidence 9999999986 446688999999999864
No 238
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.69 E-value=1.7e-16 Score=161.72 Aligned_cols=221 Identities=11% Similarity=0.061 Sum_probs=137.7
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchh-hhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
+|.++++..+.+.+ ...|+||++||.+++... .|...|.. ++..|++ +|.|+++|+||+|.+......
T Consensus 19 ~~~~l~y~~~G~~~-----~~~p~vvllHG~~~~~~~--~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~--- 87 (286)
T 2qmq_A 19 PYGSVTFTVYGTPK-----PKRPAIFTYHDVGLNYKS--CFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPL--- 87 (286)
T ss_dssp TTEEEEEEEESCCC-----TTCCEEEEECCTTCCHHH--HHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCT---
T ss_pred CCeEEEEEeccCCC-----CCCCeEEEeCCCCCCchh--hhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCC---
Confidence 67889888887543 234899999998766431 02111211 4566766 699999999999866432111
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc------------
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------ 679 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~------------ 679 (776)
.......+++.+.+..+++.. +.+++.|+||||||.+++.++.++|++++++|+.+|......+.
T Consensus 88 -~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T 2qmq_A 88 -GYQYPSLDQLADMIPCILQYL--NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTS 164 (286)
T ss_dssp -TCCCCCHHHHHHTHHHHHHHH--TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTS
T ss_pred -CCCccCHHHHHHHHHHHHHHh--CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccc
Confidence 110113455555554444432 33589999999999999999999999999999998865321110
Q ss_pred --------cccccccc-CCCCC------------Cc---cch-------hcCC-hhhhhccCCCcEEEEecCCCCccChH
Q 004067 680 --------TFYTEKYM-GLPSE------------DP---VGY-------EYSS-VMHHVHKMKGKLLLVHGMIDENVHFR 727 (776)
Q Consensus 680 --------~~~~~~~~-~~~~~------------~~---~~~-------~~~~-~~~~~~~i~~P~lii~G~~D~~v~~~ 727 (776)
..+..... ..+.. .. ..+ .... ....+.++++|+|+++|++|..++ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~ 243 (286)
T 2qmq_A 165 SIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-A 243 (286)
T ss_dssp CHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-H
T ss_pred cchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-H
Confidence 00000000 00000 00 000 0000 013456788999999999999887 2
Q ss_pred HHHHHHHHHHHCCC-CeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 728 HTARLINALVAARK-PYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 728 ~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
. .+.+.+... +.++++++++||.+ ..+.++++.+.+.+||+
T Consensus 244 -~---~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 244 -V---VECNSKLDPTQTSFLKMADSGGQP-QLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp -H---HHHHHHSCGGGEEEEEETTCTTCH-HHHCHHHHHHHHHHHHC
T ss_pred -H---HHHHHHhcCCCceEEEeCCCCCcc-cccChHHHHHHHHHHhc
Confidence 2 333334444 68999999999986 44568889999999985
No 239
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.68 E-value=2.1e-14 Score=147.46 Aligned_cols=280 Identities=10% Similarity=0.044 Sum_probs=184.3
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCce
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~ 202 (776)
..+....|+| ||+.|+.. .++.|.+||+.+++....+..... .+....|+|||+.|+..+. +.|.+|++.+++.
T Consensus 14 ~~V~~~~fsp---~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 14 DRVKGIDFHP---TEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp SCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred CceEEEEECC---CCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE
Confidence 4688999999 99999876 788999999999876634544333 4778999999999988875 4799999998876
Q ss_pred eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCC
Q 004067 203 RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASN 282 (776)
Q Consensus 203 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 282 (776)
......... .+..++|+||++.|+..+.|
T Consensus 90 ~~~~~~h~~-----------------~v~~~~~~~~~~~l~sgs~D---------------------------------- 118 (304)
T 2ynn_A 90 VVDFEAHPD-----------------YIRSIAVHPTKPYVLSGSDD---------------------------------- 118 (304)
T ss_dssp EEEEECCSS-----------------CEEEEEECSSSSEEEEEETT----------------------------------
T ss_pred EEEEeCCCC-----------------cEEEEEEcCCCCEEEEECCC----------------------------------
Confidence 543322211 14578999999988876643
Q ss_pred CeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc-CCeEEEEEEeecCceEEEEEEECCCCceEEEEE-ec-c
Q 004067 283 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EE-L 359 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~ 359 (776)
..|.+||+.++....... ..+...+..++|+| |++.++..+ .+..|.+||+.++....... .. .
T Consensus 119 --~~v~lWd~~~~~~~~~~~-------~~h~~~v~~v~~~p~~~~~l~sgs----~D~~v~iwd~~~~~~~~~~~~~~~~ 185 (304)
T 2ynn_A 119 --LTVKLWNWENNWALEQTF-------EGHEHFVMCVAFNPKDPSTFASGC----LDRTVKVWSLGQSTPNFTLTTGQER 185 (304)
T ss_dssp --SCEEEEEGGGTTEEEEEE-------CCCCSCEEEEEECTTCTTEEEEEE----TTSEEEEEETTCSSCSEEEECCCTT
T ss_pred --CeEEEEECCCCcchhhhh-------cccCCcEEEEEECCCCCCEEEEEe----CCCeEEEEECCCCCccceeccCCcC
Confidence 247899998774332222 45677899999999 566776665 45579999997766433222 21 1
Q ss_pred CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCc
Q 004067 360 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL 438 (776)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~ 438 (776)
..... .|.|.+ ++.++++...+| .|.+||+.+++ ...+..+...+.... |+|+++.| +++..++.
T Consensus 186 ~v~~~---~~~~~~------~~~~l~s~s~D~--~i~iWd~~~~~~~~~~~~h~~~v~~~~-~~p~~~~l-~s~s~Dg~- 251 (304)
T 2ynn_A 186 GVNYV---DYYPLP------DKPYMITASDDL--TIKIWDYQTKSCVATLEGHMSNVSFAV-FHPTLPII-ISGSEDGT- 251 (304)
T ss_dssp CEEEE---EECCST------TCCEEEEEETTS--EEEEEETTTTEEEEEEECCSSCEEEEE-ECSSSSEE-EEEETTSC-
T ss_pred cEEEE---EEEEcC------CCCEEEEEcCCC--eEEEEeCCCCccceeeCCCCCCEEEEE-ECCCCCEE-EEEcCCCe-
Confidence 11110 122211 334666666777 89999988765 455666655666554 99999854 45555543
Q ss_pred eeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 439 ESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 439 ~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
+.+|.+. .+. ....+..+. .+..++++|+|+..+++....+ .+.+++.
T Consensus 252 -i~iWd~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~---g~~~~~~ 300 (304)
T 2ynn_A 252 -LKIWNSS---TYK----VEKTLNVGLERSWCIATHPTGRKNYIASGFDN---GFTVLSL 300 (304)
T ss_dssp -EEEEETT---TCC----EEEEECCSSSSEEEEEECTTCGGGCEEEEETT---EEEEEEC
T ss_pred -EEEEECC---CCc----eeeeccCCCccEEEEEECCCCCceEEEEecCC---ceEEEEe
Confidence 7788754 232 445565443 4667899998865333322222 3555554
No 240
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.68 E-value=1.9e-16 Score=169.14 Aligned_cols=151 Identities=15% Similarity=0.120 Sum_probs=95.9
Q ss_pred ceEEEEEcCC--C--cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCccccc--ccc--cccchhhhHHHHhCCcEEEEEC
Q 004067 524 PDIVQIQAND--G--TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC--DSW--INTVDMRAQYLRSKGILVWKLD 595 (776)
Q Consensus 524 ~~~~~~~~~d--g--~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~--~~~--~~~~~~~~~~l~~~G~~v~~~d 595 (776)
..++.+.+.+ | ..+.++++.|... ...++.|+|+++||+++..... ..| ...+..++..|+++||+|+++|
T Consensus 46 ~~~i~y~t~~~~g~~~~~~g~l~~P~~~-~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D 124 (397)
T 3h2g_A 46 VAEFTYATIGVEGEPATASGVLLIPGGE-RCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSD 124 (397)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEECT-TCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEEC
T ss_pred EEEEEEEecCCCCCeEEEEEEEEeCCCC-CCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEec
Confidence 3455555433 4 4689999999774 2336789999999987653310 000 0123445778889999999999
Q ss_pred CCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc-CCCCCCcEEEEeechHHHHHHHHHhh-CC----C-ceEEEEE
Q 004067 596 NRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR-FP----D-VFQCAVS 668 (776)
Q Consensus 596 ~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~-~~----~-~~~~~v~ 668 (776)
+||+|.++...............+.|...++..+.++ ...+.++++|+||||||++++.++.. .+ + .+.+++.
T Consensus 125 ~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~ 204 (397)
T 3h2g_A 125 YLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAP 204 (397)
T ss_dssp CTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEE
T ss_pred CCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEec
Confidence 9999987532111000000012355666666666554 33346899999999999999888732 22 1 4677777
Q ss_pred cCCCCCc
Q 004067 669 GAPVTSW 675 (776)
Q Consensus 669 ~~~~~~~ 675 (776)
.++..++
T Consensus 205 ~~~~~~l 211 (397)
T 3h2g_A 205 ISGPYAL 211 (397)
T ss_dssp ESCCSSH
T ss_pred ccccccH
Confidence 7776664
No 241
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.68 E-value=4.9e-16 Score=156.10 Aligned_cols=195 Identities=12% Similarity=0.023 Sum_probs=125.7
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 633 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 633 (776)
.|.||++||.+++.. .|..++..|++.||.|+++|+||+|.|.... ...++++.+.+..+++..
T Consensus 16 ~~~vvllHG~~~~~~-------~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~---------~~~~~~~a~~l~~~l~~l 79 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA-------DWQPVLSHLARTQCAALTLDLPGHGTNPERH---------CDNFAEAVEMIEQTVQAH 79 (264)
T ss_dssp BCEEEEECCTTCCGG-------GGHHHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCCCHH-------HHHHHHHHhcccCceEEEecCCCCCCCCCCC---------ccCHHHHHHHHHHHHHHh
Confidence 488999999876643 3455677887679999999999999886421 012455666665555554
Q ss_pred CCCCCcEEEEeechHHHHHHH---HHhhCCCceEEEEEcCCCCCcccc----------------------ccccccc---
Q 004067 634 LAKVGHIGLYGWSYGGYLSAI---TLARFPDVFQCAVSGAPVTSWDGY----------------------DTFYTEK--- 685 (776)
Q Consensus 634 ~id~~~i~l~G~S~GG~~a~~---~a~~~~~~~~~~v~~~~~~~~~~~----------------------~~~~~~~--- 685 (776)
.++..++.|+||||||.+++. +|.++|++++++|+.++....... ......+
T Consensus 80 ~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T 1r3d_A 80 VTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQ 159 (264)
T ss_dssp CCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTS
T ss_pred CcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhh
Confidence 333224999999999999999 888899999999988764321100 0000000
Q ss_pred -ccCC-CCC------------Cc----cchh------cCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCC
Q 004067 686 -YMGL-PSE------------DP----VGYE------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 741 (776)
Q Consensus 686 -~~~~-~~~------------~~----~~~~------~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~ 741 (776)
.... ... .. ..+. ..+....+.++++|+|+++|++|..++ .+.+.+ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~---~- 230 (264)
T 1r3d_A 160 AVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS---G- 230 (264)
T ss_dssp GGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH---C-
T ss_pred hhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh---C-
Confidence 0000 000 00 0000 012233467788999999999997542 233333 2
Q ss_pred CeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 742 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 742 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
.++++++++||.+ ..+.++++.+.+.+|+.++
T Consensus 231 -~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 231 -LSYSQVAQAGHNV-HHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp -SEEEEETTCCSCH-HHHCHHHHHHHHHHHHHHH
T ss_pred -CcEEEcCCCCCch-hhcCHHHHHHHHHHHHHHh
Confidence 5789999999987 5567889999999999875
No 242
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.68 E-value=6.8e-16 Score=156.39 Aligned_cols=235 Identities=13% Similarity=0.063 Sum_probs=147.7
Q ss_pred CceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCC--cccccccccccchhhhHHHHhCCcEEEEECCCCC
Q 004067 523 PPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPC--VQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 599 (776)
Q Consensus 523 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~--~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~ 599 (776)
+.+.+++.++ .+..+.+++ |+.. . |+|+++||.++ +. ..|... ....+.+++.||+|+++|.++.
T Consensus 5 ~~~~~~~~s~~~~~~~~v~~--~p~~----~--~~v~llHG~~~~~~~---~~w~~~-~~~~~~l~~~~~~vv~pd~~~~ 72 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQF--QGGG----P--HAVYLLDGLRAQDDY---NGWDIN-TPAFEEYYQSGLSVIMPVGGQS 72 (280)
T ss_dssp CEEEEEEEETTTTEEEEEEE--ECCS----S--SEEEECCCTTCCSSS---CHHHHH-SCHHHHHTTSSSEEEEECCCTT
T ss_pred eEEEEEEECcccCceeEEEE--cCCC----C--CEEEEECCCCCCCCc---cccccc-CcHHHHHhcCCeEEEEECCCCC
Confidence 4566777765 456666664 4332 1 48999999753 22 123211 1123567788999999998764
Q ss_pred CCCchhhhhhhhh--ccCCccHHHH--HHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCc
Q 004067 600 ARRGLKFEASIKH--NCGRIDAEDQ--LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 675 (776)
Q Consensus 600 g~~~~~~~~~~~~--~~~~~~~~D~--~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~ 675 (776)
..+.. +...... ......+.+. .+.+.++.++..++.++++|+||||||++|+.++.++|++|+++++.+|..++
T Consensus 73 ~~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 73 SFYTD-WYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp CTTSB-CSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred ccccC-CCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccc
Confidence 32211 0000000 0011223332 23344444434456679999999999999999999999999999999998765
Q ss_pred cccc--ccc-----------cccccCCCCCCccchhcCChhhhhccC---CCcEEEEecCCCC--------------ccC
Q 004067 676 DGYD--TFY-----------TEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDE--------------NVH 725 (776)
Q Consensus 676 ~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~P~lii~G~~D~--------------~v~ 725 (776)
.... ... ....++.+. ...+...++...+.++ ..|+++.+|+.|. .++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~ 229 (280)
T 1dqz_A 152 SESWWPTLIGLAMNDSGGYNANSMWGPSS--DPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLT 229 (280)
T ss_dssp TSTTHHHHHHHHHHHTTSCCHHHHHCSTT--SHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHH
T ss_pred cCcchhhhHHHHhhhccCcCHHHhcCCCC--chhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHH
Confidence 4310 000 011112221 1245555665555544 4799999999997 567
Q ss_pred hHHHHHHHHHHHHCC-CCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 726 FRHTARLINALVAAR-KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 726 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
...+.+++++|++.+ .++++.++++++|.+. .....+...+.||.+.
T Consensus 230 ~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~ 277 (280)
T 1dqz_A 230 LRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP---YWNEQLVAMKADIQHV 277 (280)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCceEEEecCCCccChH---HHHHHHHHHHHHHHHH
Confidence 889999999999999 9999999988899752 2344456666776654
No 243
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.68 E-value=1.3e-16 Score=163.77 Aligned_cols=215 Identities=10% Similarity=-0.001 Sum_probs=143.4
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhh
Q 004067 531 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 610 (776)
Q Consensus 531 ~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~ 610 (776)
..+|.++.+..+.+ .|+||++||.+++.. .| ..++..|++. |.|+++|+||+|.+......
T Consensus 15 ~~~g~~l~~~~~g~---------~~~vv~lHG~~~~~~---~~----~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~-- 75 (302)
T 1mj5_A 15 EIKGRRMAYIDEGT---------GDPILFQHGNPTSSY---LW----RNIMPHCAGL-GRLIACDLIGMGDSDKLDPS-- 75 (302)
T ss_dssp EETTEEEEEEEESC---------SSEEEEECCTTCCGG---GG----TTTGGGGTTS-SEEEEECCTTSTTSCCCSSC--
T ss_pred EECCEEEEEEEcCC---------CCEEEEECCCCCchh---hh----HHHHHHhccC-CeEEEEcCCCCCCCCCCCCC--
Confidence 34788888877642 278999999877654 23 3345666655 89999999999988643110
Q ss_pred hhccCCccHHHHHHHHHHHHHcCCCCC-CcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCC---cccccc------
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQGLAKV-GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGYDT------ 680 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~~~id~-~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~---~~~~~~------ 680 (776)
........++.+.+..+++.. +. .++.++||||||.+++.++.++|++++++|+.+|... +.....
T Consensus 76 --~~~~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 151 (302)
T 1mj5_A 76 --GPERYAYAEHRDYLDALWEAL--DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLF 151 (302)
T ss_dssp --STTSSCHHHHHHHHHHHHHHT--TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHH
T ss_pred --CcccccHHHHHHHHHHHHHHh--CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHH
Confidence 111234666666666666553 33 6899999999999999999999999999999887653 110000
Q ss_pred ----------------cccccccC----CCCC----------------Cc----cchhcC--------------Chhhhh
Q 004067 681 ----------------FYTEKYMG----LPSE----------------DP----VGYEYS--------------SVMHHV 706 (776)
Q Consensus 681 ----------------~~~~~~~~----~~~~----------------~~----~~~~~~--------------~~~~~~ 706 (776)
.+...+.. .... .. ..+... +....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 231 (302)
T 1mj5_A 152 QAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWL 231 (302)
T ss_dssp HHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHH
T ss_pred HHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhh
Confidence 00000000 0000 00 000000 113345
Q ss_pred ccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 707 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 707 ~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
.++++|+|+++|++|..+++.....+.+.+ .+ +++++ ++||.+ ..+.++++.+.+.+|+.+.
T Consensus 232 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~-~~e~p~~~~~~i~~fl~~~ 293 (302)
T 1mj5_A 232 SESPIPKLFINAEPGALTTGRMRDFCRTWP----NQ-TEITV-AGAHFI-QEDSPDEIGAAIAAFVRRL 293 (302)
T ss_dssp TTCCSCEEEEEEEECSSSSHHHHHHHTTCS----SE-EEEEE-EESSCG-GGTCHHHHHHHHHHHHHHH
T ss_pred hccCCCeEEEEeCCCCCCChHHHHHHHHhc----CC-ceEEe-cCcCcc-cccCHHHHHHHHHHHHHhh
Confidence 678899999999999999988777665544 34 88889 999986 5667899999999999864
No 244
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.68 E-value=3.1e-15 Score=184.92 Aligned_cols=340 Identities=11% Similarity=0.064 Sum_probs=220.9
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.|||||+.|+.... ..+++|++.++......... +...+....|+|
T Consensus 801 v~~~~~s~dg~~l~~~~~------~~v~~~d~~~~~~~~~~~~~----------------------~~~~v~~~~~sp-- 850 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAK------NKVLLFDIHTSGLLAEIHTG----------------------HHSTIQYCDFSP-- 850 (1249)
T ss_dssp BCCCCBCTTSSEEEEEET------TEEEEEETTTCCEEEEEECS----------------------SSSCCCEEEECS--
T ss_pred EEEEEECCCCCEEEEEcC------CcEEEEEecCCCceeEEcCC----------------------CCCceEEEEEcC--
Confidence 467899999999997653 36999999988764443211 124678899999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCcee-----------
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQR----------- 203 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~----------- 203 (776)
+|+.++.. .++.|.+||+.++.....+.... ..+..+.|||||+.|+..+. +.|.+|++.++...
T Consensus 851 -~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~-~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 928 (1249)
T 3sfz_A 851 -YDHLAVIALSQYCVELWNIDSRLKVADCRGHL-SWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDV 928 (1249)
T ss_dssp -STTEEEEECSSSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEE
T ss_pred -CCCEEEEEeCCCeEEEEEcCCCceeeecCCCc-cceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeE
Confidence 99999987 67889999999988764444443 34888999999999998875 46888887642110
Q ss_pred --------EEeeCCCCC-ceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 204 --------QLTHGANGN-TVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 204 --------~lt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
.+....... ....+...-........+..++|||||+.++....+
T Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~-------------------------- 982 (1249)
T 3sfz_A 929 VFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED-------------------------- 982 (1249)
T ss_dssp EEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT--------------------------
T ss_pred EEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC--------------------------
Confidence 000000000 000000000000011224578899999988876643
Q ss_pred CCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEE
Q 004067 275 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 354 (776)
Q Consensus 275 ~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l 354 (776)
..|++|++.+++.... ...+...+..++|||||+.++..+ .+..|.+||+.+++...+
T Consensus 983 ----------g~i~i~d~~~~~~~~~--------~~~h~~~v~~l~~s~dg~~l~s~~----~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 983 ----------GAIKIIELPNNRVFSS--------GVGHKKAVRHIQFTADGKTLISSS----EDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp ----------SCCEEEETTTTSCEEE--------CCCCSSCCCCEEECSSSSCEEEEC----SSSBEEEEETTTTEEECC
T ss_pred ----------CCEEEEEcCCCceeee--------cccCCCceEEEEECCCCCEEEEEc----CCCEEEEEECCCCceEEE
Confidence 2368899988875543 145666788899999999877665 345699999999876654
Q ss_pred EEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEc
Q 004067 355 LVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGT 433 (776)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~ 433 (776)
..+...... +.+.+++.+++...+| .|++|++.+++ ...+..+...+.... |++||+.++..+
T Consensus 1041 ~~~~~~v~~------------~~~~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~~v~~~~-~s~d~~~l~s~s- 1104 (1249)
T 3sfz_A 1041 QAHQETVKD------------FRLLQDSRLLSWSFDG--TVKVWNVITGRIERDFTCHQGTVLSCA-ISSDATKFSSTS- 1104 (1249)
T ss_dssp BCCSSCEEE------------EEECSSSEEEEEESSS--EEEEEETTTTCCCEEEECCSSCCCCEE-ECSSSSSCEEEC-
T ss_pred ecCCCcEEE------------EEEcCCCcEEEEECCC--cEEEEECCCCceeEEEcccCCcEEEEE-ECCCCCEEEEEc-
Confidence 433322111 1222344455555666 89999987665 345555555555554 999999765544
Q ss_pred cCCCceeeEEEEEeCCCCCCccccceeecCCCC-eEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 004067 434 LDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 505 (776)
Q Consensus 434 ~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~ 505 (776)
.++. +.+|.+.. +. ....+..+.+ +..+.|||||+.|+..... ..|++|+..+++....
T Consensus 1105 ~d~~--v~iwd~~~---~~----~~~~l~~h~~~v~~~~~s~dg~~lat~~~d----g~i~vwd~~~~~~~~~ 1164 (1249)
T 3sfz_A 1105 ADKT--AKIWSFDL---LS----PLHELKGHNGCVRCSAFSLDGILLATGDDN----GEIRIWNVSDGQLLHS 1164 (1249)
T ss_dssp CSSC--CCEECSSS---SS----CSBCCCCCSSCEEEEEECSSSSEEEEEETT----SCCCEEESSSSCCCCC
T ss_pred CCCc--EEEEECCC---cc----eeeeeccCCCcEEEEEECCCCCEEEEEeCC----CEEEEEECCCCceEEE
Confidence 3433 77887653 32 4455555443 6788999999988877543 3488899988875443
No 245
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.68 E-value=2.8e-14 Score=153.24 Aligned_cols=284 Identities=13% Similarity=0.054 Sum_probs=189.7
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCce
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~ 202 (776)
..+....|+| |++.|+.. .++.|.+||+.+++....+..+.. .+..+.|+|||+.|+..+. +.|.+|++.+++.
T Consensus 109 ~~V~~~~~~p---~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 109 SPVTRVIFHP---VFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFEC 184 (410)
T ss_dssp SCEEEEEECS---SSSEEEEEESSSCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETTSCCCEEETTSSCE
T ss_pred CcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 4688999999 99988876 788999999999887745554443 4888999999998888775 5799999988765
Q ss_pred eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCC
Q 004067 203 RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASN 282 (776)
Q Consensus 203 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 282 (776)
........ ..+..+.|+|||+.|+..+.+
T Consensus 185 ~~~~~~h~-----------------~~V~~v~~~p~~~~l~s~s~D---------------------------------- 213 (410)
T 1vyh_C 185 IRTMHGHD-----------------HNVSSVSIMPNGDHIVSASRD---------------------------------- 213 (410)
T ss_dssp EECCCCCS-----------------SCEEEEEECSSSSEEEEEETT----------------------------------
T ss_pred eEEEcCCC-----------------CCEEEEEEeCCCCEEEEEeCC----------------------------------
Confidence 43222111 114578899999998876643
Q ss_pred CeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE-eccCc
Q 004067 283 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDS 361 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~ 361 (776)
..|.+||+.+++....- ..+...+..+.|+|||+.++..+ .+..|.+||+.+++...... +....
T Consensus 214 --~~i~~wd~~~~~~~~~~--------~~h~~~v~~~~~~~~g~~l~s~s----~D~~v~vwd~~~~~~~~~~~~h~~~v 279 (410)
T 1vyh_C 214 --KTIKMWEVQTGYCVKTF--------TGHREWVRMVRPNQDGTLIASCS----NDQTVRVWVVATKECKAELREHRHVV 279 (410)
T ss_dssp --SEEEEEETTTCCEEEEE--------ECCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred --CeEEEEECCCCcEEEEE--------eCCCccEEEEEECCCCCEEEEEc----CCCeEEEEECCCCceeeEecCCCceE
Confidence 35899999988754321 34566788999999999877765 34569999999887654332 22211
Q ss_pred eeecccccccCCCC------------ccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEE
Q 004067 362 WVNLHDCFTPLDKG------------VTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQV 428 (776)
Q Consensus 362 ~~~~~~~~~~~~~~------------~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i 428 (776)
.. -.|.|.... ....++.++++...+| .|.+||+.++. ...+..+...+..+. |+++|++|
T Consensus 280 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~--~i~iwd~~~~~~~~~~~~h~~~v~~v~-~~~~g~~l 353 (410)
T 1vyh_C 280 EC---ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK--TIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFI 353 (410)
T ss_dssp EE---EEECCSCGGGGGGGCCSCC-------CCEEEEEETTS--EEEEEETTTTEEEEEEECCSSCEEEEE-ECSSSSCE
T ss_pred EE---EEEcCcccccchhhhccccccccCCCCCEEEEEeCCC--eEEEEECCCCceEEEEECCCCcEEEEE-EcCCCCEE
Confidence 10 012221100 0001244666766777 89999987665 455666666666664 99999976
Q ss_pred EEEEccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 429 YFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 429 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
+. +..++ .+.+|.+. .+. .+..+..+. .+..+.|+|+++.|+..... ..|.+|+.
T Consensus 354 ~s-~s~D~--~i~vwd~~---~~~----~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D----~~i~vW~~ 409 (410)
T 1vyh_C 354 LS-CADDK--TLRVWDYK---NKR----CMKTLNAHEHFVTSLDFHKTAPYVVTGSVD----QTVKVWEC 409 (410)
T ss_dssp EE-EETTT--EEEEECCT---TSC----CCEEEECCSSCEEEEEECSSSSCEEEEETT----SEEEEEC-
T ss_pred EE-EeCCC--eEEEEECC---CCc----eEEEEcCCCCcEEEEEEcCCCCEEEEEeCC----CcEEEEeC
Confidence 54 44443 37777664 232 456666554 46788999999988755432 24666653
No 246
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.67 E-value=1.1e-13 Score=171.10 Aligned_cols=341 Identities=14% Similarity=0.060 Sum_probs=216.4
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEee-cCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVF-SPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
+..++|||||++|+..+.+ ..|.+||+.+++..... .+ ...+....|+|
T Consensus 618 v~~~~~s~~~~~l~s~~~d-----~~i~vw~~~~~~~~~~~~~h------------------------~~~v~~~~~s~- 667 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGAD-----KTLQVFKAETGEKLLDIKAH------------------------EDEVLCCAFSS- 667 (1249)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCC------------------------SSCEEEEEECT-
T ss_pred EEEEEECCCCCEEEEEeCC-----CeEEEEECCCCCEEEEeccC------------------------CCCEEEEEEec-
Confidence 5788999999999866542 46999999988764433 22 24788999999
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCC--EEEEEEC-CcEEEEecCCCceeEEeeCCCC
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGT--MIAFVRD-CELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~--~la~~~~-~~l~~~~l~~g~~~~lt~~~~~ 211 (776)
||++|+.. .++.|.+||+.+++....+.... ..+....|+|+++ .++..+. +.|.+|++.+++..........
T Consensus 668 --~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~ 744 (1249)
T 3sfz_A 668 --DDSYIATCSADKKVKIWDSATGKLVHTYDEHS-EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN 744 (1249)
T ss_dssp --TSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS
T ss_pred --CCCEEEEEeCCCeEEEEECCCCceEEEEcCCC-CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC
Confidence 99999876 67889999999988774454443 3488899999655 4444443 5799999999876543332211
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
.+..+.|+|||+.|+..+.+ ..|.+||
T Consensus 745 -----------------~v~~~~~sp~~~~l~s~s~d------------------------------------g~v~vwd 771 (1249)
T 3sfz_A 745 -----------------SVNHCRFSPDDELLASCSAD------------------------------------GTLRLWD 771 (1249)
T ss_dssp -----------------CEEEEEECSSTTEEEEEESS------------------------------------SEEEEEE
T ss_pred -----------------CEEEEEEecCCCEEEEEECC------------------------------------CeEEEEe
Confidence 14578899999988877643 3578999
Q ss_pred cCCCceEE-EEcccCCC----CCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecc
Q 004067 292 AAGGPVSW-MDLQCGGT----DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 366 (776)
Q Consensus 292 ~~~~~~~~-l~~~~~~~----~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 366 (776)
+.+++... +....... ........+..++|+|||+.++... ...+++||+.++.............+ ..
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~v-~~ 845 (1249)
T 3sfz_A 772 VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-----KNKVLLFDIHTSGLLAEIHTGHHSTI-QY 845 (1249)
T ss_dssp GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-----TTEEEEEETTTCCEEEEEECSSSSCC-CE
T ss_pred CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-----CCcEEEEEecCCCceeEEcCCCCCce-EE
Confidence 98776433 22211000 0011223566789999999877765 23589999998876554432211110 01
Q ss_pred cccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEE
Q 004067 367 DCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 445 (776)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~ 445 (776)
-.|+| ++.+++++..+| .|.+|+.+++.. ..+..+...+..+. |+++|+.++..+. ++. +.+|.+
T Consensus 846 ~~~sp--------~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~h~~~v~~v~-~spdg~~l~s~s~-dg~--v~vw~~ 911 (1249)
T 3sfz_A 846 CDFSP--------YDHLAVIALSQY--CVELWNIDSRLKVADCRGHLSWVHGVM-FSPDGSSFLTASD-DQT--IRVWET 911 (1249)
T ss_dssp EEECS--------STTEEEEECSSS--CEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSEEEEEET-TSC--EEEEEH
T ss_pred EEEcC--------CCCEEEEEeCCC--eEEEEEcCCCceeeecCCCccceEEEE-ECCCCCEEEEEeC-CCe--EEEEEc
Confidence 12333 334666666666 789999887654 44555555566665 9999997665554 332 677764
Q ss_pred EeCC-------------------------CCCCcc------ccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEE
Q 004067 446 KLYP-------------------------DWNHTL------EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILL 494 (776)
Q Consensus 446 ~~~~-------------------------~g~~~~------~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~ 494 (776)
.... +..... ...........+..+.++|+|+.++..... +.|.+
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~----g~i~i 987 (1249)
T 3sfz_A 912 KKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED----GAIKI 987 (1249)
T ss_dssp HHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT----SCCEE
T ss_pred cccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC----CCEEE
Confidence 3100 000000 000011112245677999999988887654 45888
Q ss_pred EEcCCCceeEeec
Q 004067 495 CSLQDGSLVLPLY 507 (776)
Q Consensus 495 ~~~~~~~~~~~l~ 507 (776)
++..++.....+.
T Consensus 988 ~d~~~~~~~~~~~ 1000 (1249)
T 3sfz_A 988 IELPNNRVFSSGV 1000 (1249)
T ss_dssp EETTTTSCEEECC
T ss_pred EEcCCCceeeecc
Confidence 9998887655443
No 247
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.67 E-value=6.8e-16 Score=159.62 Aligned_cols=212 Identities=13% Similarity=0.046 Sum_probs=135.5
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 612 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~ 612 (776)
+|..+++....+ ++.|+||++||.+++.. .|..++..|++. |.|+++|+||+|.|....
T Consensus 29 ~g~~l~y~~~G~-------g~~~~vvllHG~~~~~~-------~w~~~~~~L~~~-~~via~Dl~GhG~S~~~~------ 87 (318)
T 2psd_A 29 LDSFINYYDSEK-------HAENAVIFLHGNATSSY-------LWRHVVPHIEPV-ARCIIPDLIGMGKSGKSG------ 87 (318)
T ss_dssp TTEEEEEEECCS-------CTTSEEEEECCTTCCGG-------GGTTTGGGTTTT-SEEEEECCTTSTTCCCCT------
T ss_pred CCeEEEEEEcCC-------CCCCeEEEECCCCCcHH-------HHHHHHHHhhhc-CeEEEEeCCCCCCCCCCC------
Confidence 777787775432 23368999999876543 233445666654 799999999999886431
Q ss_pred ccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC----Ccccccc--------
Q 004067 613 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT----SWDGYDT-------- 680 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~----~~~~~~~-------- 680 (776)
...+.++++.+.+..+++.-.+ .+++.|+||||||.+++.+|.++|++++++|+.++.. .+..+..
T Consensus 88 -~~~~~~~~~a~dl~~ll~~l~~-~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 165 (318)
T 2psd_A 88 -NGSYRLLDHYKYLTAWFELLNL-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALI 165 (318)
T ss_dssp -TSCCSHHHHHHHHHHHHTTSCC-CSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHH
T ss_pred -CCccCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHH
Confidence 1123467777777777665432 1689999999999999999999999999999864321 1110000
Q ss_pred -------------ccccccc----CCCCC------------Cc----c-c--h-hcC-----C----------hhhhhcc
Q 004067 681 -------------FYTEKYM----GLPSE------------DP----V-G--Y-EYS-----S----------VMHHVHK 708 (776)
Q Consensus 681 -------------~~~~~~~----~~~~~------------~~----~-~--~-~~~-----~----------~~~~~~~ 708 (776)
.+...+. ..... .. . . + ... . ....+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (318)
T 2psd_A 166 KSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRA 245 (318)
T ss_dssp HSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHT
T ss_pred hcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhcc
Confidence 0000000 00000 00 0 0 0 000 0 0123456
Q ss_pred C-CCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 709 M-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 709 i-~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+ ++|+|+++|++| .+++ .+..+.+.+ .+.+++++ ++||.+ ..+.++++.+.+.+||.+.
T Consensus 246 i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~----~~~~~~~i-~~gH~~-~~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 246 SDDLPKLFIESDPG-FFSN-AIVEGAKKF----PNTEFVKV-KGLHFL-QEDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp CTTSCEEEEEEEEC-SSHH-HHHHHHTTS----SSEEEEEE-EESSSG-GGTCHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEeccc-cCcH-HHHHHHHhC----CCcEEEEe-cCCCCC-HhhCHHHHHHHHHHHHHHh
Confidence 7 899999999999 8776 555554433 45778888 679976 6678999999999999764
No 248
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.67 E-value=3.6e-15 Score=157.40 Aligned_cols=201 Identities=8% Similarity=0.009 Sum_probs=144.8
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
..++|||||++|+..+... ...|.+||+.+++......+. ..+.++.|||
T Consensus 137 ~~v~fSpDg~~la~as~~~---d~~i~iwd~~~~~~~~~~~~~------------------------~~V~~v~fsp--- 186 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKV---PAIMRIIDPSDLTEKFEIETR------------------------GEVKDLHFST--- 186 (365)
T ss_dssp EEEEECTTSSCEEEEESCS---SCEEEEEETTTTEEEEEEECS------------------------SCCCEEEECT---
T ss_pred EEEEEcCCCCEEEEEECCC---CCEEEEeECCCCcEEEEeCCC------------------------CceEEEEEcc---
Confidence 4689999999998776432 357999999999876555432 3588999999
Q ss_pred CceEEEEeCCCcEEEEeCCCCccceecC-CCCCCCccCceeCCCCCEEEEEECC-----cEEEEecCCCceeEEeeCCCC
Q 004067 138 KKKIIMVPLPDGIYFQDLSCSKPELKLS-SSSCSPVIDPHLSSDGTMIAFVRDC-----ELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 138 dg~~l~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~~~~~~SpDg~~la~~~~~-----~l~~~~l~~g~~~~lt~~~~~ 211 (776)
||++|+...++.+.+|+..+++.....+ ......+..++|||||+.++..+.. .++.+++..+....+....
T Consensus 187 dg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~-- 264 (365)
T 4h5i_A 187 DGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ-- 264 (365)
T ss_dssp TSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE--
T ss_pred CCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee--
Confidence 9999999988889999888776542222 2222346778999999999988753 3777887766543221100
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
..+. ...+..++|||||+.|+..+.| ..|.+||
T Consensus 265 ---~~~~--------~~~V~~~~~Spdg~~lasgs~D------------------------------------~~V~iwd 297 (365)
T 4h5i_A 265 ---VTNR--------FKGITSMDVDMKGELAVLASND------------------------------------NSIALVK 297 (365)
T ss_dssp ---EESS--------CSCEEEEEECTTSCEEEEEETT------------------------------------SCEEEEE
T ss_pred ---ecCC--------CCCeEeEEECCCCCceEEEcCC------------------------------------CEEEEEE
Confidence 0000 0114578999999999987754 2479999
Q ss_pred cCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC
Q 004067 292 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT 348 (776)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 348 (776)
+.+++....-. ..+...+..++|||||++|+..+ .+..|.+||+..
T Consensus 298 ~~~~~~~~~~~-------~gH~~~V~~v~fSpdg~~laS~S----~D~tvrvw~ip~ 343 (365)
T 4h5i_A 298 LKDLSMSKIFK-------QAHSFAITEVTISPDSTYVASVS----AANTIHIIKLPL 343 (365)
T ss_dssp TTTTEEEEEET-------TSSSSCEEEEEECTTSCEEEEEE----TTSEEEEEECCT
T ss_pred CCCCcEEEEec-------CcccCCEEEEEECCCCCEEEEEe----CCCeEEEEEcCC
Confidence 99988654322 46778899999999999888776 566789999854
No 249
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.67 E-value=3.5e-14 Score=150.32 Aligned_cols=204 Identities=12% Similarity=0.059 Sum_probs=142.7
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCc---eEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCK---QELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
.+..++|||||++|+.... ...|++|++++++ ...+..+ ...+....|
T Consensus 10 ~i~~~~~s~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~h------------------------~~~v~~~~~ 60 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPN-----NHEVHIYEKSGNKWVQVHELKEH------------------------NGQVTGVDW 60 (372)
T ss_dssp CCCEEEECTTSSEEEEECS-----SSEEEEEEEETTEEEEEEEEECC------------------------SSCEEEEEE
T ss_pred CeEEEEECCCCCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecCC------------------------CCcccEEEE
Confidence 3589999999999987644 2469999999985 3334332 246889999
Q ss_pred eecCCCceEEEEe-CCCcEEEEeCCCCccce--ecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEE---
Q 004067 133 VKTSSKKKIIMVP-LPDGIYFQDLSCSKPEL--KLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQL--- 205 (776)
Q Consensus 133 sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~--~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~l--- 205 (776)
+| ||+.|+.. .++.|.+||+.+++... .+.... ..+..+.|+|||+.|+.... +.|.+|++.++....+
T Consensus 61 ~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~ 136 (372)
T 1k8k_C 61 AP---DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN-RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 136 (372)
T ss_dssp ET---TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCS-SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE
T ss_pred eC---CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCC-CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee
Confidence 99 99999876 67899999998887441 222232 34788999999999998875 5799999988763211
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
...+.. ..+..+.|+||++.|+....+ .
T Consensus 137 ~~~~~~----------------~~i~~~~~~~~~~~l~~~~~d------------------------------------g 164 (372)
T 1k8k_C 137 IKKPIR----------------STVLSLDWHPNSVLLAAGSCD------------------------------------F 164 (372)
T ss_dssp ECTTCC----------------SCEEEEEECTTSSEEEEEETT------------------------------------S
T ss_pred eecccC----------------CCeeEEEEcCCCCEEEEEcCC------------------------------------C
Confidence 111110 114578999999988876633 2
Q ss_pred EEEEEEcC------------------CCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECC
Q 004067 286 RLGVVSAA------------------GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK 347 (776)
Q Consensus 286 ~l~~~d~~------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~ 347 (776)
.|++||+. .++.... ...+...+..+.|+|||+.++... .+..|.+||+.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~i~d~~ 232 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE--------SSSSCGWVHGVCFSANGSRVAWVS----HDSTVCLADAD 232 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE--------CCCCSSCEEEEEECSSSSEEEEEE----TTTEEEEEEGG
T ss_pred CEEEEEcccccccccccccccccccchhhheEe--------cCCCCCeEEEEEECCCCCEEEEEe----CCCEEEEEECC
Confidence 35677743 2332221 134566789999999999777765 34569999998
Q ss_pred CCceEEEEE
Q 004067 348 TGQRKVILV 356 (776)
Q Consensus 348 ~g~~~~l~~ 356 (776)
+++......
T Consensus 233 ~~~~~~~~~ 241 (372)
T 1k8k_C 233 KKMAVATLA 241 (372)
T ss_dssp GTTEEEEEE
T ss_pred CCceeEEEc
Confidence 887654443
No 250
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.67 E-value=7e-15 Score=170.64 Aligned_cols=247 Identities=9% Similarity=0.063 Sum_probs=170.0
Q ss_pred CeeeEEEeecCCCceEEEEeCC------CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC---------
Q 004067 126 GVTRYEWVKTSSKKKIIMVPLP------DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC--------- 190 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~~~------~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~--------- 190 (776)
.+..+.||| ||++|+|..+ .+|+++|+++++.. ..+.. ......+.|||| +.|+|++..
T Consensus 164 ~~~~~~~SP---DG~~la~~~~~~G~e~~~i~v~dl~tg~~~-~~~~~-~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 164 ALDAWAASD---DGRLLAYSVQDGGSDWRTVKFVGVADGKPL-ADELK-WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp EEEEEEECT---TSSEEEEEEEETTCSEEEEEEEETTTCCEE-EEEEE-EEESCCCEESTT-SEEEEEECCCC-------
T ss_pred EEEeEEECC---CCCEEEEEEcCCCCceEEEEEEECCCCCCC-CccCC-CceeccEEEECC-CEEEEEEecCcccccccc
Confidence 356789999 9999999833 36999999999886 43221 112357999999 999999742
Q ss_pred ------cEEEEecCCCce--eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCC
Q 004067 191 ------ELHVLNLLINEQ--RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGK 262 (776)
Q Consensus 191 ------~l~~~~l~~g~~--~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 262 (776)
+||++++.+++. +.+...... +.| ...+.|||||++|++.+.+...
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~-------~~~--------~~~~~~SpDG~~l~~~~~~~~~----------- 291 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPEL-------PKR--------GHGASVSSDGRWVVITSSEGTD----------- 291 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTC-------TTC--------EEEEEECTTSCEEEEEEECTTC-----------
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCC-------CeE--------EEEEEECCCCCEEEEEEEccCC-----------
Confidence 499999988764 333332211 001 2367899999999998754211
Q ss_pred CCCCCCCcceecCCCCCCCCCeEEEEEEEcCCC--c-eEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceE
Q 004067 263 SSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG--P-VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKL 339 (776)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~--~-~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 339 (776)
...+|+++|++++ + .+.+... ......+ ++|||+.|++.++++....
T Consensus 292 --------------------~~~~l~~~d~~~~~~~~~~~l~~~---------~~~~~~~-~~~dg~~l~~~s~~~~~~~ 341 (741)
T 1yr2_A 292 --------------------PVNTVHVARVTNGKIGPVTALIPD---------LKAQWDF-VDGVGDQLWFVSGDGAPLK 341 (741)
T ss_dssp --------------------SCCEEEEEEEETTEECCCEEEECS---------SSSCEEE-EEEETTEEEEEECTTCTTC
T ss_pred --------------------CcceEEEEECCCCCCcccEEecCC---------CCceEEE-EeccCCEEEEEECCCCCCC
Confidence 1257899999988 5 6666432 1222333 4599999999888776678
Q ss_pred EEEEEECCCC--ceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccC-CeEEE
Q 004067 340 KVLKFDIKTG--QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG-DWMVE 416 (776)
Q Consensus 340 ~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~-~~~~~ 416 (776)
.|+++|++++ ..+.++.+.... .. .+++.++.+++....+|..+|++++++|+..+.|+.. ...+.
T Consensus 342 ~l~~~d~~~~~~~~~~l~~~~~~~-l~----------~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~ 410 (741)
T 1yr2_A 342 KIVRVDLSGSTPRFDTVVPESKDN-LE----------SVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSAS 410 (741)
T ss_dssp EEEEEECSSSSCEEEEEECCCSSE-EE----------EEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEE
T ss_pred EEEEEeCCCCccccEEEecCCCCe-EE----------EEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEE
Confidence 8999999884 566666543221 10 1134466788888889999999999988878888754 33444
Q ss_pred EEEeecCCCcEEEEEEcc-CCCceeeEEEEEeC
Q 004067 417 QIVGVNEASGQVYFTGTL-DGPLESHLYCAKLY 448 (776)
Q Consensus 417 ~~~~~s~dg~~i~~~~~~-~~~~~~~l~~~~~~ 448 (776)
.+ .+++|++.|+|..+. ..| ..+|.+++.
T Consensus 411 ~~-~~s~d~~~l~~~~ss~~~P--~~i~~~d~~ 440 (741)
T 1yr2_A 411 GL-SGRPGDRHAYLSFSSFTQP--ATVLALDPA 440 (741)
T ss_dssp EE-ECCBTCSCEEEEEEETTEE--EEEEEEETT
T ss_pred Ee-ecCCCCCEEEEEEcCCCCC--CEEEEEECC
Confidence 44 488999888887654 334 578888873
No 251
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.66 E-value=2.8e-16 Score=161.47 Aligned_cols=197 Identities=16% Similarity=0.102 Sum_probs=132.9
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhC--CcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHH
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 630 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~ 630 (776)
..|+||++||.+++.. .|..+++.|+++ ||.|+++|+||+|.+..... ..++++.+.+..+.
T Consensus 35 ~~~~vvllHG~~~~~~-------~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~---------~~~~~~~~~l~~~~ 98 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSY-------SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW---------EQVQGFREAVVPIM 98 (302)
T ss_dssp CCCCEEEECCTTCCGG-------GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH---------HHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCChh-------HHHHHHHHHHhcCCCcEEEEeccCCCccchhhHH---------HHHHHHHHHHHHHh
Confidence 4578999999776643 345567888888 99999999999987654321 13566777777666
Q ss_pred HcCCCCCCcEEEEeechHHHHHHHHHhhCCC-ceEEEEEcCCCCCccccc-cc-------------------------cc
Q 004067 631 KQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPVTSWDGYD-TF-------------------------YT 683 (776)
Q Consensus 631 ~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~~v~~~~~~~~~~~~-~~-------------------------~~ 683 (776)
+.. .+++.++||||||.+++.++.++|+ +++++|+.++........ .. ..
T Consensus 99 ~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (302)
T 1pja_A 99 AKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSI 175 (302)
T ss_dssp HHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTG
T ss_pred hcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhh
Confidence 553 3689999999999999999999999 799999887654321100 00 00
Q ss_pred ccccCCCCCCccch----------hcC----C---hhhhhccCCCcEEEEecCCCCccChHHHHHHHHH-----------
Q 004067 684 EKYMGLPSEDPVGY----------EYS----S---VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINA----------- 735 (776)
Q Consensus 684 ~~~~~~~~~~~~~~----------~~~----~---~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~----------- 735 (776)
..+...+.. ...+ ... . ....+.+++ |+|+++|++|.++++..+..+.+.
T Consensus 176 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 1pja_A 176 CNYWHDPHH-DDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEE 253 (302)
T ss_dssp GGGBCCTTC-HHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGG
T ss_pred hhcccChhh-hhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhh
Confidence 000011110 0000 000 0 134567788 999999999999998877665321
Q ss_pred -------------HHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 004067 736 -------------LVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 772 (776)
Q Consensus 736 -------------l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 772 (776)
+... .++++++++++||.. ..+..+.+.+.+.+||
T Consensus 254 ~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 254 QLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTA-WHSNRTLYETCIEPWL 301 (302)
T ss_dssp SHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTT-TTSCHHHHHHHTGGGC
T ss_pred hhhhhhhhhchhhHhhc-CCeEEEEecCccccc-cccCHHHHHHHHHHhc
Confidence 1111 248999999999986 5567888888887775
No 252
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.66 E-value=1.5e-15 Score=142.84 Aligned_cols=168 Identities=11% Similarity=0.029 Sum_probs=120.9
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCc---EEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHH
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI---LVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 630 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~---~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~ 630 (776)
.|+||++||..++.. .|..++..|++.|| .|+++|+||+|.+... ..+++.+.+..+.
T Consensus 3 ~~~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~------------~~~~~~~~~~~~~ 63 (181)
T 1isp_A 3 HNPVVMVHGIGGASF-------NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------NGPVLSRFVQKVL 63 (181)
T ss_dssp CCCEEEECCTTCCGG-------GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHH------------HHHHHHHHHHHHH
T ss_pred CCeEEEECCcCCCHh-------HHHHHHHHHHHcCCCCccEEEEecCCCCCchhh------------hHHHHHHHHHHHH
Confidence 378999999776543 34456788999998 6999999999877431 1344555555554
Q ss_pred HcCCCCCCcEEEEeechHHHHHHHHHhhC--CCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhcc
Q 004067 631 KQGLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHK 708 (776)
Q Consensus 631 ~~~~id~~~i~l~G~S~GG~~a~~~a~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (776)
++. +.+++.++||||||.+++.++.++ |++++++|+.+|...+.... . .+. .. ..
T Consensus 64 ~~~--~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~-----~---~~~--------~~-----~~ 120 (181)
T 1isp_A 64 DET--GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK-----A---LPG--------TD-----PN 120 (181)
T ss_dssp HHH--CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB-----C---CCC--------SC-----TT
T ss_pred HHc--CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccccccc-----c---CCC--------CC-----Cc
Confidence 432 446899999999999999999987 88999999998875432110 0 000 00 11
Q ss_pred CCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 709 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 709 i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
.+.|+|+++|++|.++|+..+ .....+++++++++|.+.. +. .++.+.+.+||.+
T Consensus 121 ~~~p~l~i~G~~D~~v~~~~~---------~~~~~~~~~~~~~gH~~~~-~~-~~~~~~i~~fl~~ 175 (181)
T 1isp_A 121 QKILYTSIYSSADMIVMNYLS---------RLDGARNVQIHGVGHIGLL-YS-SQVNSLIKEGLNG 175 (181)
T ss_dssp CCCEEEEEEETTCSSSCHHHH---------CCBTSEEEEESSCCTGGGG-GC-HHHHHHHHHHHTT
T ss_pred cCCcEEEEecCCCcccccccc---------cCCCCcceeeccCchHhhc-cC-HHHHHHHHHHHhc
Confidence 246999999999999998743 1356789999999998743 33 3789999999975
No 253
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.66 E-value=1.3e-15 Score=158.34 Aligned_cols=208 Identities=13% Similarity=0.117 Sum_probs=131.3
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEEC----CCCCCCCchhhhhhh
Q 004067 535 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLD----NRGTARRGLKFEASI 610 (776)
Q Consensus 535 ~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d----~rg~g~~~~~~~~~~ 610 (776)
..+.+..+.|.. ...|+||++||.+++.. .| ..|..++..| +.||.|+++| +||+|.+....
T Consensus 24 ~~~~y~~~g~~~-----~~~~~vvllHG~~~~~~---~~-~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~~---- 89 (335)
T 2q0x_A 24 PYCKIPVFMMNM-----DARRCVLWVGGQTESLL---SF-DYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHAH---- 89 (335)
T ss_dssp TTEEEEEEEECT-----TSSSEEEEECCTTCCTT---CS-TTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHHH----
T ss_pred CceeEEEeccCC-----CCCcEEEEECCCCcccc---ch-hHHHHHHHHH-HCCcEEEEEeccCCCCCCCCccccC----
Confidence 557777666422 23478999999654422 12 2234456667 7799999995 58999875311
Q ss_pred hhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHh--hCCCceEEEEEcCCCCCccc--cc-----c-
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA--RFPDVFQCAVSGAPVTSWDG--YD-----T- 680 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~--~~~~~~~~~v~~~~~~~~~~--~~-----~- 680 (776)
...|+.+.++++.+.. +.+++.|+||||||.+++.++. .+|++++++|+.+|...... +. .
T Consensus 90 -------~~~d~~~~~~~l~~~l--~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~ 160 (335)
T 2q0x_A 90 -------DAEDVDDLIGILLRDH--CMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAAR 160 (335)
T ss_dssp -------HHHHHHHHHHHHHHHS--CCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHH
T ss_pred -------cHHHHHHHHHHHHHHc--CCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHH
Confidence 2567888888887642 4579999999999999999998 47999999999877543210 00 0
Q ss_pred ------ccc----------ccccCCCCCCccchh-------------------cCChhhhhccCCCcEEEEecCCCCccC
Q 004067 681 ------FYT----------EKYMGLPSEDPVGYE-------------------YSSVMHHVHKMKGKLLLVHGMIDENVH 725 (776)
Q Consensus 681 ------~~~----------~~~~~~~~~~~~~~~-------------------~~~~~~~~~~i~~P~lii~G~~D~~v~ 725 (776)
... ..+...+. ....+. ..+....+.++++|+|+++|++|.++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp 239 (335)
T 2q0x_A 161 KEHVEKLMAEGRGEDSLAMLKHYDIPI-TPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKP 239 (335)
T ss_dssp HHHHHHHHHHTCTTCGGGGTTTCSSCC-CHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCC
T ss_pred HHHHHHHhhccCccccccchhhccCcc-CHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCC
Confidence 000 00000000 000000 001123467889999999999999999
Q ss_pred hHH-HHHHHHHHHHCCCCeE--------E-----EEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 726 FRH-TARLINALVAARKPYE--------I-----LIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 726 ~~~-~~~~~~~l~~~~~~~~--------~-----~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+.. ...+.+.+.+.-...+ + ++++++|| +..+.+.+||.+.
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~ 294 (335)
T 2q0x_A 240 SDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADE 294 (335)
T ss_dssp CHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhh
Confidence 864 2233344433323344 5 78999999 3478889998753
No 254
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.66 E-value=1.2e-13 Score=142.85 Aligned_cols=274 Identities=9% Similarity=0.039 Sum_probs=177.0
Q ss_pred CCceeEcCCC-CEEEEEeCCCCcCcceEEEEecCCCce------EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeee
Q 004067 57 PTSIGFSPDD-NLITYLLSPDHSLSRKVFSFDPKTCKQ------ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTR 129 (776)
Q Consensus 57 ~~~~~~SpDG-~~ia~~~~~~~~~~~~l~~~~~~~~~~------~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 129 (776)
+..++|||++ +.|+-.+. + ..|.+|++.+.+. +.+..| ...+..
T Consensus 20 V~~l~~~~~~~~~l~s~s~-D----~~v~~W~~~~~~~~~~~~~~~~~~h------------------------~~~v~~ 70 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASR-D----KTLISWKLTGDDQKFGVPVRSFKGH------------------------SHIVQD 70 (319)
T ss_dssp EEEEEECSSCTTEEEEEET-T----SEEEEEEEEEETTEEEEEEEEEECC------------------------SSCEEE
T ss_pred EEEEEccCCCccEEEEecC-C----ccEEEecCCCCCccccccceEEeCC------------------------cccEEE
Confidence 5788999976 66664433 3 4699998865321 223332 246888
Q ss_pred EEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEee
Q 004067 130 YEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTH 207 (776)
Q Consensus 130 ~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~ 207 (776)
..|+| ||++|+.. .++.|.+||+.+++....+..... .+....|+|+++.|+..+. +.|.+|++.+.....+..
T Consensus 71 ~~~s~---dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~ 146 (319)
T 3frx_A 71 CTLTA---DGAYALSASWDKTLRLWDVATGETYQRFVGHKS-DVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLG 146 (319)
T ss_dssp EEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECC
T ss_pred EEECC---CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 99999 99999876 688999999999887645554443 4888999999999988875 469999998655444422
Q ss_pred CCCCCceecCCcccceecccCCcceEEECCCC------CeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 208 GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDS------KFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
... + +..+.|+|++ ..|+..+.+
T Consensus 147 h~~----------~--------v~~~~~~~~~~~~~~~~~l~s~~~d--------------------------------- 175 (319)
T 3frx_A 147 HND----------W--------VSQVRVVPNEKADDDSVTIISAGND--------------------------------- 175 (319)
T ss_dssp CSS----------C--------EEEEEECCC------CCEEEEEETT---------------------------------
T ss_pred cCC----------c--------EEEEEEccCCCCCCCccEEEEEeCC---------------------------------
Confidence 111 1 3466788854 355544432
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCc
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS 361 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~ 361 (776)
..|.+||+.+++..... ..+...+..++|||||+.|+..+ .+..|.+||+.+++...........
T Consensus 176 ---~~i~~wd~~~~~~~~~~--------~~h~~~v~~~~~sp~g~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~v 240 (319)
T 3frx_A 176 ---KMVKAWNLNQFQIEADF--------IGHNSNINTLTASPDGTLIASAG----KDGEIMLWNLAAKKAMYTLSAQDEV 240 (319)
T ss_dssp ---SCEEEEETTTTEEEEEE--------CCCCSCEEEEEECTTSSEEEEEE----TTCEEEEEETTTTEEEEEEECCSCE
T ss_pred ---CEEEEEECCcchhheee--------cCCCCcEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCcEEEEecCCCcE
Confidence 24789999887654431 45677899999999999887765 4567999999988765544443332
Q ss_pred eeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee-cccc--------CCeEEEEEEeecCCCcEEEEEE
Q 004067 362 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG-PITE--------GDWMVEQIVGVNEASGQVYFTG 432 (776)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~-~lt~--------~~~~~~~~~~~s~dg~~i~~~~ 432 (776)
+. -.|+| ++.++..+..+ .+.+|+++.+... .+.. ....+..+ .|||||++|+..+
T Consensus 241 ~~---~~~sp--------~~~~la~~~~~---~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~spdg~~l~sg~ 305 (319)
T 3frx_A 241 FS---LAFSP--------NRYWLAAATAT---GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSL-AWSADGQTLFAGY 305 (319)
T ss_dssp EE---EEECS--------SSSEEEEEETT---EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEE-EECTTSSEEEEEE
T ss_pred EE---EEEcC--------CCCEEEEEcCC---CcEEEEeCcCeeeeccCccccccccCcCcceeEE-EECCCCCEEEEee
Confidence 21 12333 22344444333 4777777665422 1111 12234444 4999999766544
Q ss_pred ccCCCceeeEEEEEe
Q 004067 433 TLDGPLESHLYCAKL 447 (776)
Q Consensus 433 ~~~~~~~~~l~~~~~ 447 (776)
.++. +.||.+..
T Consensus 306 -~Dg~--i~vWd~~t 317 (319)
T 3frx_A 306 -TDNV--IRVWQVMT 317 (319)
T ss_dssp -TTSC--EEEEEEEE
T ss_pred -cCce--EEEEEEee
Confidence 4433 88998874
No 255
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.66 E-value=1.8e-14 Score=153.50 Aligned_cols=286 Identities=9% Similarity=0.051 Sum_probs=179.3
Q ss_pred CCceeEcCCC-CEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 57 PTSIGFSPDD-NLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 57 ~~~~~~SpDG-~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
+..++||||| +.|+..+. + ..|.+||+.+++......... +...+..+.|+|
T Consensus 76 v~~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~---------------------h~~~v~~~~~~~- 128 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSK-G----GDIILWDYDVQNKTSFIQGMG---------------------PGDAITGMKFNQ- 128 (383)
T ss_dssp EEEEEECSSCTTEEEEEEB-T----SCEEEEETTSTTCEEEECCCS---------------------TTCBEEEEEEET-
T ss_pred EEEEEECCCCCCEEEEEcC-C----CeEEEEeCCCcccceeeecCC---------------------cCCceeEEEeCC-
Confidence 5789999999 88876554 2 369999999888766553110 124688999999
Q ss_pred CCCc-eEEEEe-CCCcEEEEeCCCCccceecCCCC--CCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCC
Q 004067 136 SSKK-KIIMVP-LPDGIYFQDLSCSKPELKLSSSS--CSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGAN 210 (776)
Q Consensus 136 ~~dg-~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~--~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~ 210 (776)
++ +.|+.. .++.|.+||+.+.... .+.... ...+..+.|+||++.|+.... +.|++|++.+.....+.....
T Consensus 129 --~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~ 205 (383)
T 3ei3_B 129 --FNTNQLFVSSIRGATTLRDFSGSVIQ-VFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKA 205 (383)
T ss_dssp --TEEEEEEEEETTTEEEEEETTSCEEE-EEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSS
T ss_pred --CCCCEEEEEeCCCEEEEEECCCCceE-EEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCC
Confidence 75 445444 7789999999986665 444332 134778999999999988875 579999996554444432221
Q ss_pred CCceecCCcccceecccCCcceEEECCCCC-eEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEE
Q 004067 211 GNTVTHGLAEYIAQEEMDRKTGYWWSLDSK-FIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 289 (776)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~ 289 (776)
.+..++|+||++ .|+..+.+ ..|.+
T Consensus 206 ------------------~v~~~~~~~~~~~~l~s~~~d------------------------------------~~i~i 231 (383)
T 3ei3_B 206 ------------------KVTHAEFNPRCDWLMATSSVD------------------------------------ATVKL 231 (383)
T ss_dssp ------------------CEEEEEECSSCTTEEEEEETT------------------------------------SEEEE
T ss_pred ------------------cEEEEEECCCCCCEEEEEeCC------------------------------------CEEEE
Confidence 155789999999 55544422 35899
Q ss_pred EEcCC----CceEEEEcccCCCCCCCCcceEEEEEecc-CCeEEEEEEeecCceEEEEEEECCCCce-EEEEEeccCcee
Q 004067 290 VSAAG----GPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWV 363 (776)
Q Consensus 290 ~d~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~ 363 (776)
||+.+ ++.... ..+...+..++|+| ||+.++..+ .+..|.+||+.++.. ..+..+....+.
T Consensus 232 wd~~~~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAE---------MPHEKPVNAAYFNPTDSTKLLTTD----QRNEIRVYSSYDWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp EEGGGCCSTTCEEEE---------EECSSCEEEEEECTTTSCEEEEEE----SSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred EeCCCCCcccceEEE---------ecCCCceEEEEEcCCCCCEEEEEc----CCCcEEEEECCCCccccccccccccccc
Confidence 99987 333332 23566789999999 999887665 345799999988765 344333211110
Q ss_pred ---ecccccccCCCC--ccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCC-eEEEEEEeecCCCcEEEEEEccCC
Q 004067 364 ---NLHDCFTPLDKG--VTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGD-WMVEQIVGVNEASGQVYFTGTLDG 436 (776)
Q Consensus 364 ---~~~~~~~~~~~~--~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~-~~~~~~~~~s~dg~~i~~~~~~~~ 436 (776)
.....|.|.... +.+.+++.+ +...+| .|++||+.+++ ...+..+. ..+...+.|+++|+.|+..+ ++
T Consensus 299 ~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~--~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s--d~ 373 (383)
T 3ei3_B 299 HLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKR--TIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM--GF 373 (383)
T ss_dssp TSCCCCCEECSSSSEEEEECBCCTTT-CTTCCC--CEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE--TT
T ss_pred cccceEEeccCCCCceEEEecCCccc-ccCCCC--eEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec--CC
Confidence 001112221110 011111111 222344 89999987665 45555432 23334445999999765553 33
Q ss_pred CceeeEEEEE
Q 004067 437 PLESHLYCAK 446 (776)
Q Consensus 437 ~~~~~l~~~~ 446 (776)
.+.+|.++
T Consensus 374 --~i~iw~~~ 381 (383)
T 3ei3_B 374 --NILIWNRE 381 (383)
T ss_dssp --EEEEEECC
T ss_pred --cEEEEecC
Confidence 37788764
No 256
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.66 E-value=8.3e-14 Score=148.73 Aligned_cols=276 Identities=11% Similarity=0.017 Sum_probs=175.6
Q ss_pred CCeeeEEEeecCCCceEEEEeCCCcEEEEeCCCCccceecCCCCC-----------------CCccCceeCCCCCEEEEE
Q 004067 125 LGVTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSC-----------------SPVIDPHLSSDGTMIAFV 187 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~-----------------~~~~~~~~SpDg~~la~~ 187 (776)
..+....||| ||++|+...++.+.+|++.+++....+..... ..+..+.|||||+.|+..
T Consensus 65 ~~V~~v~fsp---dg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 65 SVVCCVKFSN---DGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp SCCCEEEECT---TSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CEEEEEEECC---CCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 3578899999 99999998888999999988876533332110 125578999999999988
Q ss_pred EC-CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCC
Q 004067 188 RD-CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVG 266 (776)
Q Consensus 188 ~~-~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 266 (776)
+. +.|.+||+.+++.......... .+..+.|+|||+.|+..+.+
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~h~~-----------------~v~~~~~~p~~~~l~s~s~d------------------ 186 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQGHEQ-----------------DIYSLDYFPSGDKLVSGSGD------------------ 186 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSS-----------------CEEEEEECTTSSEEEEEETT------------------
T ss_pred cCCCeEEEEECCCCcEEEEEccCCC-----------------CEEEEEEcCCCCEEEEecCC------------------
Confidence 75 5799999998876554332211 14578899999998876643
Q ss_pred CCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc-CCeEEEEEEeecCceEEEEEEE
Q 004067 267 SEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFD 345 (776)
Q Consensus 267 ~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d 345 (776)
..|.+||+.+++.... ......+..++|+| ||+.++..+ .+..|.+||
T Consensus 187 ------------------~~v~iwd~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~s----~d~~v~iwd 235 (393)
T 1erj_A 187 ------------------RTVRIWDLRTGQCSLT---------LSIEDGVTTVAVSPGDGKYIAAGS----LDRAVRVWD 235 (393)
T ss_dssp ------------------SEEEEEETTTTEEEEE---------EECSSCEEEEEECSTTCCEEEEEE----TTSCEEEEE
T ss_pred ------------------CcEEEEECCCCeeEEE---------EEcCCCcEEEEEECCCCCEEEEEc----CCCcEEEEE
Confidence 3589999998876543 12334578899999 888777665 345699999
Q ss_pred CCCCceEEEEE--------eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-------------
Q 004067 346 IKTGQRKVILV--------EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC------------- 404 (776)
Q Consensus 346 ~~~g~~~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~------------- 404 (776)
+.++....... +....+. -.|+| ++.++++...+| .|.+||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~h~~~v~~---v~~~~--------~g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~~~~~ 302 (393)
T 1erj_A 236 SETGFLVERLDSENESGTGHKDSVYS---VVFTR--------DGQSVVSGSLDR--SVKLWNLQNANNKSDSKTPNSGTC 302 (393)
T ss_dssp TTTCCEEEEEC------CCCSSCEEE---EEECT--------TSSEEEEEETTS--EEEEEEC---------------CE
T ss_pred CCCCcEEEeecccccCCCCCCCCEEE---EEECC--------CCCEEEEEeCCC--EEEEEECCCCCCcccccCCCCCcc
Confidence 99887543321 1111111 11222 234566666677 88888876432
Q ss_pred eeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcC------CcC
Q 004067 405 LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDH------NMR 477 (776)
Q Consensus 405 ~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~sp------dg~ 477 (776)
...+..+...+..+. |++++++|+.. ..++ .+.+|.+. .|. .+..+..+. .+..+.+++ +++
T Consensus 303 ~~~~~~h~~~v~~~~-~~~~~~~l~sg-s~D~--~v~iwd~~---~~~----~~~~l~~h~~~v~~v~~~~~~~~~p~~~ 371 (393)
T 1erj_A 303 EVTYIGHKDFVLSVA-TTQNDEYILSG-SKDR--GVLFWDKK---SGN----PLLMLQGHRNSVISVAVANGSSLGPEYN 371 (393)
T ss_dssp EEEEECCSSCEEEEE-ECGGGCEEEEE-ETTS--EEEEEETT---TCC----EEEEEECCSSCEEEEEECSSCTTCTTCE
T ss_pred eEEEecccCcEEEEE-ECCCCCEEEEE-eCCC--eEEEEECC---CCe----EEEEECCCCCCEEEEEecCCcCcCCCCC
Confidence 122333444455554 89999865544 4443 36666544 333 445565554 466777776 666
Q ss_pred EEEEEeeCCCCCCEEEEEEc
Q 004067 478 NFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 478 ~l~~~~~~~~~~~~i~~~~~ 497 (776)
.|+... .+ ..|.+|+.
T Consensus 372 ~l~sgs-~D---g~i~iW~~ 387 (393)
T 1erj_A 372 VFATGS-GD---CKARIWKY 387 (393)
T ss_dssp EEEEEE-TT---SEEEEEEE
T ss_pred EEEEEC-CC---CcEEECcc
Confidence 555443 32 35777775
No 257
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.66 E-value=9.2e-15 Score=153.75 Aligned_cols=288 Identities=8% Similarity=0.041 Sum_probs=181.7
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||+.++...... .....|.+|++.+++...+... .+...+....|+|.+
T Consensus 21 v~~~~~~p~~~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~----------------------~~~~~v~~~~~~~~~ 77 (357)
T 3i2n_A 21 VFDCKWVPCSAKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREI----------------------EKAKPIKCGTFGATS 77 (357)
T ss_dssp EEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEE----------------------EESSCEEEEECTTCC
T ss_pred eEEEEEcCCCceEEEecCcc-CCCcEEEEEeCCCCcccceeee----------------------cccCcEEEEEEcCCC
Confidence 48899999998887666431 0135799999999886544321 012478899999922
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCc-cceecCCCCCCCccCc------eeCCCCCEEEEEEC-CcEEEEecCCCc-e-eEE
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSK-PELKLSSSSCSPVIDP------HLSSDGTMIAFVRD-CELHVLNLLINE-Q-RQL 205 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~------~~SpDg~~la~~~~-~~l~~~~l~~g~-~-~~l 205 (776)
++|+.|+.. .++.|.+||+.+++ ....+..... .+..+ .||||++.|+.... +.|.+|++.+++ . ..+
T Consensus 78 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 156 (357)
T 3i2n_A 78 LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKE-IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANM 156 (357)
T ss_dssp TTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSS-CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEE
T ss_pred CCCceEEEecCCCeEEEEeCCCCCccEEEEEeccc-ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceec
Confidence 126888876 68899999999887 4424444333 35555 67899999988875 579999999876 2 333
Q ss_pred eeCCCCCceecCCcccceecccCCcceEE----ECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYW----WSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
...... .. ..+..+. |+||++.|+....+
T Consensus 157 ~~~~~~--~~------------~~v~~~~~~~~~~~~~~~l~~~~~d--------------------------------- 189 (357)
T 3i2n_A 157 EPVQGE--NK------------RDCWTVAFGNAYNQEERVVCAGYDN--------------------------------- 189 (357)
T ss_dssp CCCTTS--CC------------CCEEEEEEECCCC-CCCEEEEEETT---------------------------------
T ss_pred cccCCC--CC------------CceEEEEEEeccCCCCCEEEEEccC---------------------------------
Confidence 211110 00 0022344 89999988876632
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc---CCeEEEEEEeecCceEEEEEEECCCCceE-EEE--
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH---GNILTAQVLNRSQTKLKVLKFDIKTGQRK-VIL-- 355 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp---Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~-~l~-- 355 (776)
..|++||+.+++.... ..+...+..+.|+| +++.++... .+..|.+||+.++... .+.
T Consensus 190 ---~~i~i~d~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~ 253 (357)
T 3i2n_A 190 ---GDIKLFDLRNMALRWE---------TNIKNGVCSLEFDRKDISMNKLVATS----LEGKFHVFDMRTQHPTKGFASV 253 (357)
T ss_dssp ---SEEEEEETTTTEEEEE---------EECSSCEEEEEESCSSSSCCEEEEEE----STTEEEEEEEEEEETTTEEEEE
T ss_pred ---CeEEEEECccCceeee---------cCCCCceEEEEcCCCCCCCCEEEEEC----CCCeEEEEeCcCCCcccceeee
Confidence 3589999999887554 33456789999999 898777765 3456889998765432 111
Q ss_pred ---EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCc--------------------eeeccccCC
Q 004067 356 ---VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGT--------------------CLGPITEGD 412 (776)
Q Consensus 356 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~--------------------~~~~lt~~~ 412 (776)
.+....+. -.|+| ++..++++...+| .|++|++..+ ....+..+.
T Consensus 254 ~~~~~~~~v~~---~~~~~-------~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (357)
T 3i2n_A 254 SEKAHKSTVWQ---VRHLP-------QNRELFLTAGGAG--GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST 321 (357)
T ss_dssp EEECCSSCEEE---EEEET-------TEEEEEEEEETTS--EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS
T ss_pred ccCCCcCCEEE---EEECC-------CCCcEEEEEeCCC--cEEEeecCCCcccccccCCCCccccccccceeeccccCC
Confidence 12221111 11222 1222566666777 7777876542 233344455
Q ss_pred eEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 413 WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 413 ~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
..+..+. |+++|+.+++++..++. +.+|.+.
T Consensus 322 ~~v~~~~-~s~~~~~l~~s~~~d~~--i~iw~~~ 352 (357)
T 3i2n_A 322 QPISSLD-WSPDKRGLCVCSSFDQT--VRVLIVT 352 (357)
T ss_dssp SCEEEEE-ECSSSTTEEEEEETTSE--EEEEEEC
T ss_pred CCeeEEE-EcCCCCeEEEEecCCCc--EEEEECC
Confidence 5566654 99999988877766643 7788775
No 258
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.65 E-value=8.5e-15 Score=168.23 Aligned_cols=292 Identities=12% Similarity=0.088 Sum_probs=198.0
Q ss_pred eEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCce
Q 004067 61 GFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKK 140 (776)
Q Consensus 61 ~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~ 140 (776)
..+++|.+++|.....+....-+|+.+.+++ .+.|.+.+. ++.++ ...+..+.||| ||+
T Consensus 83 ~p~~~g~~~y~~~~~~~~~~~~~~r~~~~~~-~~vllD~n~-------la~~~----------~~~l~~~~~Sp---Dg~ 141 (693)
T 3iuj_A 83 APFREGRYHYFFKNDGLQNQNVLWRQQEGKP-AEVFLDPNT-------LSPDG----------TTALDQLSFSR---DGR 141 (693)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEECTTSC-CEEEECGGG-------GSTTS----------CCEEEEEEECT---TSS
T ss_pred CCEEECCEEEEEEEcCCCceeEEEEeCCCCC-cEEEEehhh-------ccCCC----------cEEEEEEEECC---CCC
Confidence 3478999999998866554557888765544 456664322 11111 12466789999 999
Q ss_pred EEEEeCC------CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC--------------cEEEEecCCC
Q 004067 141 IIMVPLP------DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC--------------ELHVLNLLIN 200 (776)
Q Consensus 141 ~l~~~~~------~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~--------------~l~~~~l~~g 200 (776)
+|+|..+ ..|+++|+++|+.. ..+.. ......+.|| ||+.|+|++.. +||++++.++
T Consensus 142 ~lAy~~~~~G~~~~~i~v~dl~tg~~~-~~~~~-~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~ 218 (693)
T 3iuj_A 142 ILAYSLSLAGSDWREIHLMDVESKQPL-ETPLK-DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTA 218 (693)
T ss_dssp EEEEEEECSSCCEEEEEEEETTTCSEE-EEEEE-EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSC
T ss_pred EEEEEEecCCCceEEEEEEECCCCCCC-ccccC-CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCC
Confidence 9999722 46999999999876 43221 1124678999 99999999854 3999999877
Q ss_pred ce--eEEeeCCC-CCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCC
Q 004067 201 EQ--RQLTHGAN-GNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPF 277 (776)
Q Consensus 201 ~~--~~lt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (776)
+. +.+..... . ..| ...+.|||||++|++.+.....
T Consensus 219 ~~~~~~v~~~~~~~-------~~~--------~~~~~~SpDg~~l~~~~~~~~~-------------------------- 257 (693)
T 3iuj_A 219 QEDDRLVFGAIPAQ-------HHR--------YVGATVTEDDRFLLISAANSTS-------------------------- 257 (693)
T ss_dssp GGGCEEEESCSGGG-------CCS--------EEEEEECTTSCEEEEEEESSSS--------------------------
T ss_pred cccceEEEecCCCC-------CeE--------EEEEEEcCCCCEEEEEEccCCC--------------------------
Confidence 54 44443321 1 001 2367899999999987643221
Q ss_pred CCCCCCeEEEEEEEcCCC--ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce---E
Q 004067 278 AGASNVKVRLGVVSAAGG--PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR---K 352 (776)
Q Consensus 278 ~g~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~---~ 352 (776)
..+|+++|++++ +.+.+.. .......+ |++||+.+++.++++.....|+++|++++.. +
T Consensus 258 ------~~~i~~~d~~~~~~~~~~l~~---------~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~ 321 (693)
T 3iuj_A 258 ------GNRLYVKDLSQENAPLLTVQG---------DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWR 321 (693)
T ss_dssp ------CCEEEEEETTSTTCCCEEEEC---------SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred ------CcEEEEEECCCCCCceEEEeC---------CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccE
Confidence 146899999877 5566643 22222333 8899988888888776678899999998765 6
Q ss_pred EEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCe-EEEEEEeecCCCcEEEEE
Q 004067 353 VILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFT 431 (776)
Q Consensus 353 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~-~~~~~~~~s~dg~~i~~~ 431 (776)
.++.+..... .| +.+++.+++...++|..+|++++++|+..+.|+.... .+.. ..++++++.++|.
T Consensus 322 ~l~~~~~~~~-----~~-------s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~-~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 322 DLIPERQQVL-----TV-------HSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSG-FNGKHDDPALYFG 388 (693)
T ss_dssp EEECCCSSCE-----EE-------EEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEE-CCCCTTCSCEEEE
T ss_pred EEecCCCCEE-----EE-------EEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEe-eecCCCCCEEEEE
Confidence 6665543321 12 3446678888888899999999999988888875432 3333 3478899988888
Q ss_pred Ecc-CCCceeeEEEEEeC
Q 004067 432 GTL-DGPLESHLYCAKLY 448 (776)
Q Consensus 432 ~~~-~~~~~~~l~~~~~~ 448 (776)
.+. ..| ..||.+++.
T Consensus 389 ~ss~~tP--~~l~~~d~~ 404 (693)
T 3iuj_A 389 FENYAQP--PTLYRFEPK 404 (693)
T ss_dssp EECSSSC--CEEEEECTT
T ss_pred ecCCCCC--CEEEEEECC
Confidence 654 444 578888873
No 259
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.65 E-value=5e-14 Score=146.80 Aligned_cols=283 Identities=11% Similarity=-0.017 Sum_probs=169.0
Q ss_pred CCCcEEEEeCCCCccceecCCCCCC-CccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceecCCcccc
Q 004067 146 LPDGIYFQDLSCSKPELKLSSSSCS-PVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTHGLAEYI 222 (776)
Q Consensus 146 ~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~ 222 (776)
.++.|++||+.+++....+...... ....+.|||||+.+++... +.|+++++.+++.......+.....
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-------- 80 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER-------- 80 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE--------
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc--------
Confidence 6788999999998876334322211 2677999999999887765 4799999999876543222110000
Q ss_pred eecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEc
Q 004067 223 AQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDL 302 (776)
Q Consensus 223 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~ 302 (776)
......++|+|||+.|++........... + ......|++||+++++......
T Consensus 81 ----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~----~--------------------~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 81 ----VKSLFGAALSPDGKTLAIYESPVRLELTH----F--------------------EVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp ----EECTTCEEECTTSSEEEEEEEEEEECSSC----E--------------------EECCCEEEEEETTTTEEEEEEE
T ss_pred ----cccccceEECCCCCEEEEEeccccccccc----c--------------------cccCceEEEEECCCCcEEEEEe
Confidence 00134788999999988765210000000 0 0001468999999887654311
Q ss_pred ccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCe
Q 004067 303 QCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG 382 (776)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (776)
.......+.|||||+.+++. + ..|++||+++++......... |. ....|+|.+ ..
T Consensus 133 ---------~~~~~~~~~~s~dg~~l~~~-~-----~~i~~~d~~~~~~~~~~~~~~--~~-~~~~~s~dg-------~~ 187 (337)
T 1pby_B 133 ---------APRQITMLAWARDGSKLYGL-G-----RDLHVMDPEAGTLVEDKPIQS--WE-AETYAQPDV-------LA 187 (337)
T ss_dssp ---------CCSSCCCEEECTTSSCEEEE-S-----SSEEEEETTTTEEEEEECSTT--TT-TTTBCCCBC-------CC
T ss_pred ---------CCCCcceeEECCCCCEEEEe-C-----CeEEEEECCCCcEeeeeeccc--cC-CCceeCCCc-------cE
Confidence 11234557899999977666 1 249999999987654433221 10 011233322 21
Q ss_pred EEEEeccCCc---------------------eEEEEEeCCCceeecccc--CCeEEEEEEeecCCCcEEEEEEccCCCce
Q 004067 383 FIWASEKTGF---------------------RHLYLHDINGTCLGPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLE 439 (776)
Q Consensus 383 ~~~~s~~~g~---------------------~~l~~~~~~g~~~~~lt~--~~~~~~~~~~~s~dg~~i~~~~~~~~~~~ 439 (776)
+++....++. ..|+++|+.+++...++. ....... +.|++||+++|+. +
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~---~---- 259 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFS-TAVNPAKTRAFGA---Y---- 259 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEE-EEECTTSSEEEEE---E----
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceee-EEECCCCCEEEEe---C----
Confidence 2222111111 168999998887653322 1222333 3599999998877 1
Q ss_pred eeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEee
Q 004067 440 SHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 506 (776)
Q Consensus 440 ~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l 506 (776)
..|+.+++. .+. ....+........+.|+|||++|+... . ...|.++|..+++.+..+
T Consensus 260 ~~v~~~d~~-~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~-~---~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 260 NVLESFDLE-KNA----SIKRVPLPHSYYSVNVSTDGSTVWLGG-A---LGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp SEEEEEETT-TTE----EEEEEECSSCCCEEEECTTSCEEEEES-B---SSEEEEEETTTCCEEEEE
T ss_pred CeEEEEECC-CCc----CcceecCCCceeeEEECCCCCEEEEEc-C---CCcEEEEECcCCcEEEEE
Confidence 256666763 232 344555444567889999999887752 2 257999999888876655
No 260
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.65 E-value=3.8e-16 Score=157.85 Aligned_cols=216 Identities=11% Similarity=-0.018 Sum_probs=132.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.+|..+++....+ . ...|+||++||.+++.. .|...+..|+ .+|.|+++|+||+|.|....
T Consensus 11 ~~g~~l~y~~~~~-G-----~~~p~vvllHG~~~~~~-------~w~~~~~~L~-~~~rvia~DlrGhG~S~~~~----- 71 (276)
T 2wj6_A 11 VFDNKLSYIDNQR-D-----TDGPAILLLPGWCHDHR-------VYKYLIQELD-ADFRVIVPNWRGHGLSPSEV----- 71 (276)
T ss_dssp ETTEEEEEEECCC-C-----CSSCEEEEECCTTCCGG-------GGHHHHHHHT-TTSCEEEECCTTCSSSCCCC-----
T ss_pred eCCeEEEEEEecC-C-----CCCCeEEEECCCCCcHH-------HHHHHHHHHh-cCCEEEEeCCCCCCCCCCCC-----
Confidence 3788888776521 1 12378999999876543 3445566776 46999999999999986421
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-CCceEEEEEcCCCCCccc------c------
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG------Y------ 678 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-~~~~~~~v~~~~~~~~~~------~------ 678 (776)
..+.++++.+.+..+++.- +.+++.++||||||.+++.+|.++ |++++++|+.++...... .
T Consensus 72 ---~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~ 146 (276)
T 2wj6_A 72 ---PDFGYQEQVKDALEILDQL--GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDP 146 (276)
T ss_dssp ---CCCCHHHHHHHHHHHHHHH--TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCT
T ss_pred ---CCCCHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCc
Confidence 1233555555554444432 346899999999999999999999 999999998865321000 0
Q ss_pred c------ccccccccCCC--------------CCCccchh------------cCChhhhhccCCCcEEEEecCCCCccCh
Q 004067 679 D------TFYTEKYMGLP--------------SEDPVGYE------------YSSVMHHVHKMKGKLLLVHGMIDENVHF 726 (776)
Q Consensus 679 ~------~~~~~~~~~~~--------------~~~~~~~~------------~~~~~~~~~~i~~P~lii~G~~D~~v~~ 726 (776)
. ..+...+.... ......+. .......+.++++|+++++|..|...+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~ 226 (276)
T 2wj6_A 147 ERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPE 226 (276)
T ss_dssp TTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHH
T ss_pred chHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchh
Confidence 0 00000000000 00000000 0112334567889999988754433221
Q ss_pred HHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 727 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 727 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
. ....+.+.+.-.+.+++++|++||.. ..+.++++.+.+.+||.+
T Consensus 227 ~--~~~~~~~~~~~p~a~~~~i~~~gH~~-~~e~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 227 Y--EKINSDFAEQHPWFSYAKLGGPTHFP-AIDVPDRAAVHIREFATA 271 (276)
T ss_dssp H--HHHHHHHHHHCTTEEEEECCCSSSCH-HHHSHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHhhCCCeEEEEeCCCCCcc-cccCHHHHHHHHHHHHhh
Confidence 1 11122233334678999999999976 567789999999999975
No 261
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.65 E-value=1.1e-13 Score=144.87 Aligned_cols=289 Identities=10% Similarity=0.053 Sum_probs=176.2
Q ss_pred CeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccce--ecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCc
Q 004067 126 GVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPEL--KLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINE 201 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~--~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~ 201 (776)
.+....|+| ||+.|+.. .++.|.+||+.++.... .+..+....+..++|||||+.|+..+. +.+.+|++.++.
T Consensus 18 ~v~~l~~sp---~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 18 RCWFLAWNP---AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD 94 (345)
T ss_dssp CEEEEEECT---TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-
T ss_pred cEEEEEECC---CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC
Confidence 577899999 99999976 68899999998876331 222333335788999999999998875 578999988775
Q ss_pred eeEEee-CCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 202 QRQLTH-GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 202 ~~~lt~-~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
.+.+.. .+.. ..+..++|+|||+.|+..+.+
T Consensus 95 ~~~~~~~~~h~----------------~~v~~v~~sp~~~~l~s~s~D-------------------------------- 126 (345)
T 3fm0_A 95 FECVTTLEGHE----------------NEVKSVAWAPSGNLLATCSRD-------------------------------- 126 (345)
T ss_dssp EEEEEEECCCS----------------SCEEEEEECTTSSEEEEEETT--------------------------------
T ss_pred eEEEEEccCCC----------------CCceEEEEeCCCCEEEEEECC--------------------------------
Confidence 443322 2111 114578999999999877644
Q ss_pred CCCeEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEE---E
Q 004067 281 SNVKVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL---V 356 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~---~ 356 (776)
..|++||+.+++.. .+... ..+...+..+.|+|||+.|+..+ .+..|.+||..++....+. .
T Consensus 127 ----~~v~iwd~~~~~~~~~~~~~------~~h~~~v~~~~~~p~~~~l~s~s----~d~~i~~w~~~~~~~~~~~~~~~ 192 (345)
T 3fm0_A 127 ----KSVWVWEVDEEDEYECVSVL------NSHTQDVKHVVWHPSQELLASAS----YDDTVKLYREEEDDWVCCATLEG 192 (345)
T ss_dssp ----SCEEEEEECTTSCEEEEEEE------CCCCSCEEEEEECSSSSCEEEEE----TTSCEEEEEEETTEEEEEEEECC
T ss_pred ----CeEEEEECCCCCCeEEEEEe------cCcCCCeEEEEECCCCCEEEEEe----CCCcEEEEEecCCCEEEEEEecC
Confidence 23789998876432 22221 45666789999999999877765 3445888998877644322 2
Q ss_pred eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeC--CCce--------------eecccc-CCeEEEEEE
Q 004067 357 EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDI--NGTC--------------LGPITE-GDWMVEQIV 419 (776)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~--~g~~--------------~~~lt~-~~~~~~~~~ 419 (776)
+....+.. .|+| ++.++++...+| .|.+|+. .+.. ...+.. +...+..+
T Consensus 193 h~~~v~~l---~~sp--------~g~~l~s~s~D~--~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v- 258 (345)
T 3fm0_A 193 HESTVWSL---AFDP--------SGQRLASCSDDR--TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDI- 258 (345)
T ss_dssp CSSCEEEE---EECT--------TSSEEEEEETTS--CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEE-
T ss_pred CCCceEEE---EECC--------CCCEEEEEeCCC--eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEE-
Confidence 22222211 2333 234566666777 5666653 1111 111221 23334554
Q ss_pred eecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCcccccee-----ecCC-CCeEEEEEcCCcCEEEEEeeCCCCCCEEE
Q 004067 420 GVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVK-----LTNG-KGKHVAVLDHNMRNFVDFHDSLDSPPRIL 493 (776)
Q Consensus 420 ~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~-----l~~~-~~~~~~~~spdg~~l~~~~~~~~~~~~i~ 493 (776)
.|+++++.++..+. ++. +.+|.++.. .... ..... +..+ ..+..++|+|++..++...+.+. .|.
T Consensus 259 ~~~~~~~~l~s~~~-d~~--i~vw~~~~~--~~~~-~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg---~v~ 329 (345)
T 3fm0_A 259 AWCQLTGALATACG-DDA--IRVFQEDPN--SDPQ-QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG---EVA 329 (345)
T ss_dssp EECTTTCCEEEEET-TSC--EEEEEECTT--SCTT-SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTS---CEE
T ss_pred EEecCCCEEEEEeC-CCe--EEEEEeCCC--CCcc-eeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCC---cEE
Confidence 48999986555544 433 788887642 1110 11111 1222 34778999999865555555444 588
Q ss_pred EEEcCCCce
Q 004067 494 LCSLQDGSL 502 (776)
Q Consensus 494 ~~~~~~~~~ 502 (776)
+|+..+++.
T Consensus 330 ~W~~~~~~~ 338 (345)
T 3fm0_A 330 FWKYQRPEG 338 (345)
T ss_dssp EEEECC---
T ss_pred EEEecCCCC
Confidence 888866653
No 262
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.65 E-value=7.5e-16 Score=154.94 Aligned_cols=200 Identities=13% Similarity=0.044 Sum_probs=129.3
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
.+.|+||++||.+++.. .|..++..|++. |.|+++|+||+|.+.... ....+.++.+.+..+++
T Consensus 18 ~~~~~vv~~HG~~~~~~-------~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~--------~~~~~~~~~~~~~~~l~ 81 (267)
T 3fla_A 18 DARARLVCLPHAGGSAS-------FFFPLAKALAPA-VEVLAVQYPGRQDRRHEP--------PVDSIGGLTNRLLEVLR 81 (267)
T ss_dssp TCSEEEEEECCTTCCGG-------GGHHHHHHHTTT-EEEEEECCTTSGGGTTSC--------CCCSHHHHHHHHHHHTG
T ss_pred CCCceEEEeCCCCCCch-------hHHHHHHHhccC-cEEEEecCCCCCCCCCCC--------CCcCHHHHHHHHHHHHH
Confidence 45689999999876543 344556777654 999999999998765321 12235566655555554
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCc----eEEEEEcCCCCCccccccc--------cccccc---CCCC---CC
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTSWDGYDTF--------YTEKYM---GLPS---ED 693 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~----~~~~v~~~~~~~~~~~~~~--------~~~~~~---~~~~---~~ 693 (776)
.. +..++.|+||||||.+++.++.++|++ ++++++.++.......... +...+. ..+. ..
T Consensus 82 ~~--~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
T 3fla_A 82 PF--GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLAD 159 (267)
T ss_dssp GG--TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHS
T ss_pred hc--CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccC
Confidence 43 457899999999999999999999985 7888877665321110000 000000 0000 00
Q ss_pred c--------------cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCC
Q 004067 694 P--------------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHR 759 (776)
Q Consensus 694 ~--------------~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 759 (776)
. .......... ..++++|+|+++|++|..+++.....+.+.+ ..+++++++++ +|.+ ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~-~~~ 233 (267)
T 3fla_A 160 PELLAMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHT---TGPADLRVLPG-GHFF-LVD 233 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGB---SSCEEEEEESS-STTH-HHH
T ss_pred HHHHHHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhc---CCCceEEEecC-Ccee-ecc
Confidence 0 0000001001 1467899999999999999988777766654 23589999998 9986 445
Q ss_pred cHHHHHHHHHHHHHHh
Q 004067 760 DRIYMEERIWEFIERT 775 (776)
Q Consensus 760 ~~~~~~~~~~~fl~~~ 775 (776)
..+++.+.+.+||++.
T Consensus 234 ~~~~~~~~i~~fl~~~ 249 (267)
T 3fla_A 234 QAAPMIATMTEKLAGP 249 (267)
T ss_dssp THHHHHHHHHHHTC--
T ss_pred CHHHHHHHHHHHhccc
Confidence 7888999999998653
No 263
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.65 E-value=8.1e-14 Score=145.62 Aligned_cols=268 Identities=11% Similarity=0.053 Sum_probs=174.6
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCce
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~ 202 (776)
..+....|+| ||+.|+.. .++.|.+||+.+++....+..... .+....|||||+.|+.... +.+.+|++.+++.
T Consensus 56 ~~v~~~~~s~---d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 56 AKIYAMHWGT---DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp SCEEEEEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECSSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred CceEEEEECC---CCCEEEEEeCCCcEEEEECCCCCcceEeecCCc-cEEEEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 3688999999 99999876 788999999998876634443333 4778899999999988875 5689999887532
Q ss_pred --eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 203 --RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 203 --~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
+...... +.. ..+..+.|+|+++ |+..+.+
T Consensus 132 ~~~~~~~~~-------~h~--------~~v~~~~~~~~~~-l~s~s~d-------------------------------- 163 (340)
T 1got_B 132 NVRVSRELA-------GHT--------GYLSCCRFLDDNQ-IVTSSGD-------------------------------- 163 (340)
T ss_dssp SCEEEEEEE-------CCS--------SCEEEEEEEETTE-EEEEETT--------------------------------
T ss_pred cceeEEEec-------CCC--------ccEEEEEECCCCc-EEEEECC--------------------------------
Confidence 1111100 011 1134677888886 5554432
Q ss_pred CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE-ecc
Q 004067 281 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EEL 359 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~ 359 (776)
..|.+||+.+++....- ..+...+..++|+|||+.++..+ .+..|.+||+.++....... +..
T Consensus 164 ----~~i~~wd~~~~~~~~~~--------~~h~~~v~~~~~~~~~~~l~sg~----~d~~v~~wd~~~~~~~~~~~~h~~ 227 (340)
T 1got_B 164 ----TTCALWDIETGQQTTTF--------TGHTGDVMSLSLAPDTRLFVSGA----CDASAKLWDVREGMCRQTFTGHES 227 (340)
T ss_dssp ----SCEEEEETTTTEEEEEE--------CCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCSEEEEECCCSS
T ss_pred ----CcEEEEECCCCcEEEEE--------cCCCCceEEEEECCCCCEEEEEe----CCCcEEEEECCCCeeEEEEcCCcC
Confidence 24799999988755431 45667899999999999777665 34569999999887654433 222
Q ss_pred CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee-ccccCC--eEEEEEEeecCCCcEEEEEEccCC
Q 004067 360 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG-PITEGD--WMVEQIVGVNEASGQVYFTGTLDG 436 (776)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~-~lt~~~--~~~~~~~~~s~dg~~i~~~~~~~~ 436 (776)
..... .|+| ++.++++...+| .|.+||+..++.. .+.... ..+..+ .|+|+|+.++..+ .++
T Consensus 228 ~v~~v---~~~p--------~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~g~-~d~ 292 (340)
T 1got_B 228 DINAI---CFFP--------NGNAFATGSDDA--TCRLFDLRADQELMTYSHDNIICGITSV-SFSKSGRLLLAGY-DDF 292 (340)
T ss_dssp CEEEE---EECT--------TSSEEEEEETTS--CEEEEETTTTEEEEEECCTTCCSCEEEE-EECTTSSEEEEEE-TTS
T ss_pred CEEEE---EEcC--------CCCEEEEEcCCC--cEEEEECCCCcEEEEEccCCcccceEEE-EECCCCCEEEEEC-CCC
Confidence 22211 2333 234566666677 8999998766533 333222 234554 4999999765544 333
Q ss_pred CceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEee
Q 004067 437 PLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHD 484 (776)
Q Consensus 437 ~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~ 484 (776)
.+.+|.+. .+. ....+..+. .+..+.|+|||+.|+....
T Consensus 293 --~i~vwd~~---~~~----~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 293 --NCNVWDAL---KAD----RAGVLAGHDNRVSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp --EEEEEETT---TCC----EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred --eEEEEEcc---cCc----EeeEeecCCCcEEEEEEcCCCCEEEEEcC
Confidence 36677654 232 445565554 4678899999998876643
No 264
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.64 E-value=1.7e-13 Score=143.42 Aligned_cols=276 Identities=12% Similarity=0.052 Sum_probs=173.0
Q ss_pred CCceeE-----cC-CCCEEEEEeCCCCcCcceEEEEecCCCc-------e-EEeecCCCCCCCCCCCCHHHHHHHHHHHH
Q 004067 57 PTSIGF-----SP-DDNLITYLLSPDHSLSRKVFSFDPKTCK-------Q-ELVFSPPDGGLDENNISPEEKLRRERLRE 122 (776)
Q Consensus 57 ~~~~~~-----Sp-DG~~ia~~~~~~~~~~~~l~~~~~~~~~-------~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~ 122 (776)
+..+.| +| ||+.|+-.+.+ ..|.+||+.+++ + ..+..|
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D-----~~v~iWd~~~~~~~~~~~~~~~~l~~h----------------------- 75 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRD-----KTVMIWKLYEEEQNGYFGIPHKALTGH----------------------- 75 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETT-----SCEEEEEECSSCCSSBSEEEEEEECCC-----------------------
T ss_pred hhheeeEEEeecCCCCCEEEEEcCC-----CEEEEEECCcCCcccccccccchhccC-----------------------
Confidence 467778 77 99999865542 469999987543 1 223322
Q ss_pred hcCCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCC
Q 004067 123 RGLGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLIN 200 (776)
Q Consensus 123 ~~~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g 200 (776)
...+....|+| |++.|+.. .++.|.+||+.+++....+..+.. .+..+.|||||+.|+..+. +.|.+|++.+.
T Consensus 76 -~~~V~~~~~~~---~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~-~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 76 -NHFVSDLALSQ---ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS-EVYSVAFSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp -SSCEEEEEECS---STTEEEEEETTSEEEEEETTSSCEEEEEECCCS-CEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred -CCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC-cEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence 24688999999 99998866 688999999998876635554443 4888999999999988774 57999999844
Q ss_pred ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCC----------CeEEEEEecCCCCCeEEEeecCCCCCCCCCc
Q 004067 201 EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDS----------KFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQ 270 (776)
Q Consensus 201 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (776)
....+.... +...+ +..+.|+|++ +.|+..+.+
T Consensus 151 ~~~~~~~~~-------~~~~~--------v~~~~~~~~~~~~~~~~~~~~~l~s~~~d---------------------- 193 (343)
T 2xzm_R 151 CKFSSAEKE-------NHSDW--------VSCVRYSPIMKSANKVQPFAPYFASVGWD---------------------- 193 (343)
T ss_dssp EEEECCTTT-------SCSSC--------EEEEEECCCCCSCSCCCSSCCEEEEEETT----------------------
T ss_pred ceeeeeccc-------CCCce--------eeeeeeccccccccccCCCCCEEEEEcCC----------------------
Confidence 332221111 11111 4467899987 344444322
Q ss_pred ceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECC-CC
Q 004067 271 EDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TG 349 (776)
Q Consensus 271 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~-~g 349 (776)
..|.+||........+ ..+...+..++|+|||++|+..+ .+..|.+||+. .+
T Consensus 194 --------------~~i~iwd~~~~~~~~~---------~~h~~~v~~~~~s~~g~~l~sgs----~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 194 --------------GRLKVWNTNFQIRYTF---------KAHESNVNHLSISPNGKYIATGG----KDKKLLIWDILNLT 246 (343)
T ss_dssp --------------SEEEEEETTTEEEEEE---------ECCSSCEEEEEECTTSSEEEEEE----TTCEEEEEESSCCS
T ss_pred --------------CEEEEEcCCCceeEEE---------cCccccceEEEECCCCCEEEEEc----CCCeEEEEECCCCc
Confidence 3578999554333333 34667789999999999887765 45679999994 33
Q ss_pred ceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeec---cc-----------cCCeEE
Q 004067 350 QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGP---IT-----------EGDWMV 415 (776)
Q Consensus 350 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~---lt-----------~~~~~~ 415 (776)
.............. -.|+| ++.++..+ .++ .+.+|++.+++... +. .+...+
T Consensus 247 ~~~~~~~~~~~v~~---v~~sp--------~~~~la~~-~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 312 (343)
T 2xzm_R 247 YPQREFDAGSTINQ---IAFNP--------KLQWVAVG-TDQ--GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQC 312 (343)
T ss_dssp SCSEEEECSSCEEE---EEECS--------SSCEEEEE-ESS--CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCE
T ss_pred ccceeecCCCcEEE---EEECC--------CCCEEEEE-CCC--CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCce
Confidence 33333322222111 12333 22344443 344 58889987654322 22 122334
Q ss_pred EEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 416 EQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 416 ~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
..+ .|+|+|+.|+.. ..++ .+.+|.+..
T Consensus 313 ~~~-~~sp~g~~l~sg-~~Dg--~v~~w~~~~ 340 (343)
T 2xzm_R 313 TSL-AWNALGKKLFAG-FTDG--VIRTFSFET 340 (343)
T ss_dssp EEE-EECSSSCCEEEE-ETTS--EEEEEEEEE
T ss_pred EEE-EECCCCCeEEEe-cCCc--eEEEEEEEc
Confidence 554 499999976554 4444 388888764
No 265
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.64 E-value=6e-16 Score=164.15 Aligned_cols=224 Identities=13% Similarity=0.018 Sum_probs=146.5
Q ss_pred CCCceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcE----EEEEC
Q 004067 521 LEPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL----VWKLD 595 (776)
Q Consensus 521 ~~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~----v~~~d 595 (776)
..+.+.+.+.+. .|..+.+++|.|++. ..+++|+|+++||+..... ......++.|++.|+. |+++|
T Consensus 165 ~G~v~~~~~~S~~~g~~~~~~vy~P~~~--~~~~~PvlvllHG~~~~~~------~~~~~~~~~l~~~g~~~p~iVV~~d 236 (403)
T 3c8d_A 165 EIPAKEIIWKSERLKNSRRVWIFTTGDV--TAEERPLAVLLDGEFWAQS------MPVWPVLTSLTHRQQLPPAVYVLID 236 (403)
T ss_dssp SSCCEEEEEEETTTTEEEEEEEEEC-------CCCCEEEESSHHHHHHT------SCCHHHHHHHHHTTSSCSCEEEEEC
T ss_pred CCceEEEEEEccccCCcEEEEEEeCCCC--CCCCCCEEEEeCCHHHhhc------CcHHHHHHHHHHcCCCCCeEEEEEC
Confidence 446778888875 577899999999864 2368999999999532211 1222346778877764 99999
Q ss_pred CCCCCCCchhhhhhhhhccCCccHHHH--HHHHHHHHHcC--CCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCC
Q 004067 596 NRGTARRGLKFEASIKHNCGRIDAEDQ--LTGAEWLIKQG--LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAP 671 (776)
Q Consensus 596 ~rg~g~~~~~~~~~~~~~~~~~~~~D~--~~~i~~l~~~~--~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~ 671 (776)
++++......+ . ....+.+. .+++.++.++. ..|.++++|+|+||||++|+.++.++|++|+++++.+|
T Consensus 237 ~~~~~~r~~~~------~-~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg 309 (403)
T 3c8d_A 237 AIDTTHRAHEL------P-CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSG 309 (403)
T ss_dssp CCSHHHHHHHS------S-SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESC
T ss_pred CCCCccccccC------C-ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEecc
Confidence 98632111110 0 01122332 24566666643 35788999999999999999999999999999999999
Q ss_pred CCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCC
Q 004067 672 VTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 751 (776)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 751 (776)
...+..... +.. ......... ........|+++++|+.|..+ ...+.++++.|++.|.++++.++++
T Consensus 310 ~~~~~~~~~---------~~~-~~~~~~~~~-~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G- 376 (403)
T 3c8d_A 310 SYWWPHRGG---------QQE-GVLLEKLKA-GEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG- 376 (403)
T ss_dssp CTTTTCTTS---------SSC-CHHHHHHHT-TSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-
T ss_pred ccccCCCCC---------CcH-HHHHHHHHh-ccccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-
Confidence 875432210 000 000000000 001334578999999998654 5788999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 752 RHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 752 ~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+|.+ ......+..++.||.+.
T Consensus 377 gH~~---~~w~~~l~~~l~~l~~~ 397 (403)
T 3c8d_A 377 GHDA---LCWRGGLMQGLIDLWQP 397 (403)
T ss_dssp CSCH---HHHHHHHHHHHHHHHGG
T ss_pred CCCH---HHHHHHHHHHHHHHhcc
Confidence 6964 23445567777887654
No 266
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.64 E-value=8.1e-16 Score=152.40 Aligned_cols=204 Identities=15% Similarity=0.061 Sum_probs=125.8
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCC---------------------CCCchhhhhhhh
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT---------------------ARRGLKFEASIK 611 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~---------------------g~~~~~~~~~~~ 611 (776)
+.|.||++||..++.. .|......++..|.+.||.|+++|+|++ |.+ ..|..
T Consensus 4 ~~~~vl~lHG~g~~~~---~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~-~~w~~--- 76 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGK---VFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVN-RAWFY--- 76 (243)
T ss_dssp CCCEEEEECCTTCCHH---HHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCC-EESSC---
T ss_pred cCceEEEeCCCCccHH---HHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCC-ccccc---
Confidence 5689999999776654 2322222356677788999999999933 211 01100
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCC------CceEEEEEcCCCCCccccccccccc
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP------DVFQCAVSGAPVTSWDGYDTFYTEK 685 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~ 685 (776)
........|+.++++++.+....+..+++|+||||||.+|+.++.+++ ..+++++..++........ .
T Consensus 77 -~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-----~ 150 (243)
T 1ycd_A 77 -HSEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-----E 150 (243)
T ss_dssp -CCSSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-----T
T ss_pred -CCCCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-----c
Confidence 001112345666666665532223468999999999999999998642 2456777777664321110 0
Q ss_pred ccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCC---CCeEEEEecCCCCCCCCCCcHH
Q 004067 686 YMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR---KPYEILIFPDERHMPRRHRDRI 762 (776)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~~~~ 762 (776)
+.+... ....+. .....+.++++|+|++||++|.++|+..+..+++.+...+ .....++++++||.+... .
T Consensus 151 ~~~~~~-~~~~~~--~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~---~ 224 (243)
T 1ycd_A 151 HPGELR-ITEKFR--DSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK---K 224 (243)
T ss_dssp STTCEE-ECGGGT--TTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC---H
T ss_pred cccccc-cchhHH--HhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch---H
Confidence 000000 000010 1112345678999999999999999999999999887641 112345666789987432 3
Q ss_pred HHHHHHHHHHHHh
Q 004067 763 YMEERIWEFIERT 775 (776)
Q Consensus 763 ~~~~~~~~fl~~~ 775 (776)
.+.+.+.+||+++
T Consensus 225 ~~~~~i~~fl~~~ 237 (243)
T 1ycd_A 225 DIIRPIVEQITSS 237 (243)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5889999999875
No 267
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.64 E-value=4.8e-14 Score=148.24 Aligned_cols=294 Identities=12% Similarity=0.022 Sum_probs=183.0
Q ss_pred CCeeeEEEeecCCCceEEEEeC-----CCcEEEEeCCCCccceecCCCCCCCccCceeCCC---CCEEEEEEC-CcEEEE
Q 004067 125 LGVTRYEWVKTSSKKKIIMVPL-----PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSD---GTMIAFVRD-CELHVL 195 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~~-----~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpD---g~~la~~~~-~~l~~~ 195 (776)
..+....|+| ||+.++... ++.|++||+.+++............+..+.|+|+ |+.|+.... +.|.+|
T Consensus 19 ~~v~~~~~~p---~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 19 YTVFDCKWVP---CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp SCEEEEEECT---TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CceEEEEEcC---CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 4788999999 998777654 7889999999987652222122234788999999 688887774 579999
Q ss_pred ecCCCc-eeEEeeCCCCCceecCCcccceecccCCcceE------EECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCC
Q 004067 196 NLLINE-QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGY------WWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSE 268 (776)
Q Consensus 196 ~l~~g~-~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~------~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (776)
++.+++ .......... . +..+ +|+||++.|+....+
T Consensus 96 d~~~~~~~~~~~~~~~~-~----------------v~~~~~~~~~~~s~~~~~l~~~~~d-------------------- 138 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKE-I----------------INAIDGIGGLGIGEGAPEIVTGSRD-------------------- 138 (357)
T ss_dssp CTTSCSSCSEEECCCSS-C----------------EEEEEEESGGGCC-CCCEEEEEETT--------------------
T ss_pred eCCCCCccEEEEEeccc-c----------------eEEEeeccccccCCCccEEEEEeCC--------------------
Confidence 999886 3222221111 0 2233 478999998876643
Q ss_pred CcceecCCCCCCCCCeEEEEEEEcCCCc--eEEEEcccCCCCCCCCcceEEEEE----eccCCeEEEEEEeecCceEEEE
Q 004067 269 AQEDHAYPFAGASNVKVRLGVVSAAGGP--VSWMDLQCGGTDQNYDEEYLARVN----WMHGNILTAQVLNRSQTKLKVL 342 (776)
Q Consensus 269 ~~~~~~~~~~g~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~----~SpDg~~l~~~~~~~~~~~~l~ 342 (776)
..|.+||+.+++ ...+.... ......+..+. |+||++.++... .+..|+
T Consensus 139 ----------------~~i~vwd~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~l~~~~----~d~~i~ 193 (357)
T 3i2n_A 139 ----------------GTVKVWDPRQKDDPVANMEPVQ-----GENKRDCWTVAFGNAYNQEERVVCAGY----DNGDIK 193 (357)
T ss_dssp ----------------SCEEEECTTSCSSCSEEECCCT-----TSCCCCEEEEEEECCCC-CCCEEEEEE----TTSEEE
T ss_pred ----------------CeEEEEeCCCCCCcceeccccC-----CCCCCceEEEEEEeccCCCCCEEEEEc----cCCeEE
Confidence 237899998876 33332210 01122455666 899999887765 345799
Q ss_pred EEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee-ccc-----cCCeEEE
Q 004067 343 KFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG-PIT-----EGDWMVE 416 (776)
Q Consensus 343 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~-~lt-----~~~~~~~ 416 (776)
+||+.+++......+....... .|+|.. .++..+++...+| .|++|++..++.. .+. .+...+.
T Consensus 194 i~d~~~~~~~~~~~~~~~v~~~---~~~~~~-----~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~ 263 (357)
T 3i2n_A 194 LFDLRNMALRWETNIKNGVCSL---EFDRKD-----ISMNKLVATSLEG--KFHVFDMRTQHPTKGFASVSEKAHKSTVW 263 (357)
T ss_dssp EEETTTTEEEEEEECSSCEEEE---EESCSS-----SSCCEEEEEESTT--EEEEEEEEEEETTTEEEEEEEECCSSCEE
T ss_pred EEECccCceeeecCCCCceEEE---EcCCCC-----CCCCEEEEECCCC--eEEEEeCcCCCcccceeeeccCCCcCCEE
Confidence 9999998876555544332211 122210 0234566666677 7888887665432 121 4455566
Q ss_pred EEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCc--------------cccceeecCCC-CeEEEEEcCCcCEEEE
Q 004067 417 QIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHT--------------LEAPVKLTNGK-GKHVAVLDHNMRNFVD 481 (776)
Q Consensus 417 ~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~--------------~~~~~~l~~~~-~~~~~~~spdg~~l~~ 481 (776)
.+. |+|+++.+++++..++ .+.+|.+.. ..... ...+..+..+. .+..++|+|||+.|++
T Consensus 264 ~~~-~~~~~~~~l~~~~~dg--~i~iwd~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 338 (357)
T 3i2n_A 264 QVR-HLPQNRELFLTAGGAG--GLHLWKYEY--PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCV 338 (357)
T ss_dssp EEE-EETTEEEEEEEEETTS--EEEEEEEEC--CSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEE
T ss_pred EEE-ECCCCCcEEEEEeCCC--cEEEeecCC--CcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEE
Confidence 654 9999986677766665 388998874 11100 01233344443 4678899999999987
Q ss_pred EeeCCCCCCEEEEEEcCCCc
Q 004067 482 FHDSLDSPPRILLCSLQDGS 501 (776)
Q Consensus 482 ~~~~~~~~~~i~~~~~~~~~ 501 (776)
..+... .|.+|+..+.+
T Consensus 339 s~~~d~---~i~iw~~~~~~ 355 (357)
T 3i2n_A 339 CSSFDQ---TVRVLIVTKLN 355 (357)
T ss_dssp EEETTS---EEEEEEECC--
T ss_pred EecCCC---cEEEEECCCcc
Confidence 665443 68988886543
No 268
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.64 E-value=2.2e-13 Score=143.05 Aligned_cols=273 Identities=11% Similarity=0.036 Sum_probs=176.7
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCc-
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINE- 201 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~- 201 (776)
..+....|+| ||++|+.. .++.|.+||..+++....+.... ..+...+|||||+.|+.... +.+.++++..+.
T Consensus 65 ~~V~~~~~s~---d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~-~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 65 NKVLCMDWCK---DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC-TWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp SCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECSS-SCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred CeEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCcceEEecCC-CCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence 3688999999 99999876 78899999998877653443333 34788999999999988764 467888775432
Q ss_pred ------eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecC
Q 004067 202 ------QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 275 (776)
Q Consensus 202 ------~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (776)
...+... ...+..+.|+||++.|+..+.+
T Consensus 141 ~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~l~t~s~D--------------------------- 175 (354)
T 2pbi_B 141 ENMAAKKKSVAMH------------------TNYLSACSFTNSDMQILTASGD--------------------------- 175 (354)
T ss_dssp CCSGGGCEEEEEC------------------SSCEEEEEECSSSSEEEEEETT---------------------------
T ss_pred ccccccceeeecc------------------CCcEEEEEEeCCCCEEEEEeCC---------------------------
Confidence 1111111 1124578899999999877643
Q ss_pred CCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc--CCeEEEEEEeecCceEEEEEEECCCCceEE
Q 004067 276 PFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTGQRKV 353 (776)
Q Consensus 276 ~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~ 353 (776)
..|.+||+++++....- ..+...+..+.|+| +|+.++..+ .+..|.+||+.++....
T Consensus 176 ---------~~v~lwd~~~~~~~~~~--------~~h~~~v~~~~~~~~~~g~~l~sgs----~Dg~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 176 ---------GTCALWDVESGQLLQSF--------HGHGADVLCLDLAPSETGNTFVSGG----CDKKAMVWDMRSGQCVQ 234 (354)
T ss_dssp ---------SEEEEEETTTCCEEEEE--------ECCSSCEEEEEECCCSSCCEEEEEE----TTSCEEEEETTTCCEEE
T ss_pred ---------CcEEEEeCCCCeEEEEE--------cCCCCCeEEEEEEeCCCCCEEEEEe----CCCeEEEEECCCCcEEE
Confidence 35899999988764431 34556677788877 567777665 34569999999988654
Q ss_pred EEE-eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeec-cccCC--eEEEEEEeecCCCcEEE
Q 004067 354 ILV-EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGP-ITEGD--WMVEQIVGVNEASGQVY 429 (776)
Q Consensus 354 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~-lt~~~--~~~~~~~~~s~dg~~i~ 429 (776)
... +...... -.|+| ++..+++...++ .|.+||+..+.... +.... ..+... .|+++|+.++
T Consensus 235 ~~~~h~~~v~~---v~~~p--------~~~~l~s~s~D~--~v~lwd~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~ 300 (354)
T 2pbi_B 235 AFETHESDVNS---VRYYP--------SGDAFASGSDDA--TCRLYDLRADREVAIYSKESIIFGASSV-DFSLSGRLLF 300 (354)
T ss_dssp EECCCSSCEEE---EEECT--------TSSEEEEEETTS--CEEEEETTTTEEEEEECCTTCCSCEEEE-EECTTSSEEE
T ss_pred EecCCCCCeEE---EEEeC--------CCCEEEEEeCCC--eEEEEECCCCcEEEEEcCCCcccceeEE-EEeCCCCEEE
Confidence 433 2222111 11333 233556666677 88999987765433 32221 234444 4999999655
Q ss_pred EEEccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEE
Q 004067 430 FTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLC 495 (776)
Q Consensus 430 ~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~ 495 (776)
..+ .++. +.+|.+. .|. .+..+..+. .+..+.|||||+.|+..... ..|.+|
T Consensus 301 ~g~-~d~~--i~vwd~~---~~~----~~~~l~~h~~~v~~l~~spdg~~l~sgs~D----~~v~vW 353 (354)
T 2pbi_B 301 AGY-NDYT--INVWDVL---KGS----RVSILFGHENRVSTLRVSPDGTAFCSGSWD----HTLRVW 353 (354)
T ss_dssp EEE-TTSC--EEEEETT---TCS----EEEEECCCSSCEEEEEECTTSSCEEEEETT----SEEEEE
T ss_pred EEE-CCCc--EEEEECC---CCc----eEEEEECCCCcEEEEEECCCCCEEEEEcCC----CCEEec
Confidence 544 3332 6777664 333 445565554 46788999999988866432 245554
No 269
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.64 E-value=2.4e-13 Score=145.71 Aligned_cols=286 Identities=9% Similarity=0.102 Sum_probs=181.9
Q ss_pred eeeEEEeecCCCceEEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEE
Q 004067 127 VTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQL 205 (776)
Q Consensus 127 ~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~l 205 (776)
+..+.|++ +..++...++.|++||+.+++....+.......+..++|+|||+.|+.... +.|.+|++.+++....
T Consensus 96 ~~~~~~s~----~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 96 LNLLDWSN----LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp CBCEEECT----TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEeecC----CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE
Confidence 34577775 456777789999999999998773333323345888999999999998874 5799999998875544
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
...... .+..+.| +++.|+..+.+ .
T Consensus 172 ~~~~~~-----------------~v~~~~~--~~~~l~~~~~d------------------------------------g 196 (401)
T 4aez_A 172 MAGHQA-----------------RVGCLSW--NRHVLSSGSRS------------------------------------G 196 (401)
T ss_dssp ECCCSS-----------------CEEEEEE--ETTEEEEEETT------------------------------------S
T ss_pred ecCCCC-----------------ceEEEEE--CCCEEEEEcCC------------------------------------C
Confidence 332211 1346677 56666665532 3
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE-eccCceee
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVN 364 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~ 364 (776)
.|.+||+..+....... ..+...+..+.|+|||+.++... .+..|.+||+.++....... +......
T Consensus 197 ~i~i~d~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~----~d~~v~iwd~~~~~~~~~~~~~~~~v~~- 264 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTL-------QGHSSEVCGLAWRSDGLQLASGG----NDNVVQIWDARSSIPKFTKTNHNAAVKA- 264 (401)
T ss_dssp EEEEEETTSSSCEEEEE-------ECCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTCSSEEEEECCCSSCCCE-
T ss_pred CEEEEecccCcceeeEE-------cCCCCCeeEEEEcCCCCEEEEEe----CCCeEEEccCCCCCccEEecCCcceEEE-
Confidence 58999998443322222 45667899999999999887766 34569999999877654433 2222111
Q ss_pred cccccccCCCCccccCCeEEEEec--cCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeE
Q 004067 365 LHDCFTPLDKGVTKYSGGFIWASE--KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 442 (776)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~s~--~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l 442 (776)
-.|+| ++..++++.. .+| .|++||+.+++..........+..+. |+++|+.++..+.... ..+.+
T Consensus 265 --~~~~p-------~~~~ll~~~~gs~d~--~i~i~d~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~g~~d-g~i~v 331 (401)
T 4aez_A 265 --VAWCP-------WQSNLLATGGGTMDK--QIHFWNAATGARVNTVDAGSQVTSLI-WSPHSKEIMSTHGFPD-NNLSI 331 (401)
T ss_dssp --EEECT-------TSTTEEEEECCTTTC--EEEEEETTTCCEEEEEECSSCEEEEE-ECSSSSEEEEEECTTT-CEEEE
T ss_pred --EEECC-------CCCCEEEEecCCCCC--EEEEEECCCCCEEEEEeCCCcEEEEE-ECCCCCeEEEEeecCC-CcEEE
Confidence 11222 2334555544 355 89999988776544334444566554 9999998877754222 34788
Q ss_pred EEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 004067 443 YCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 505 (776)
Q Consensus 443 ~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~ 505 (776)
|.+.. +.. .....+..+. .+..+.|+|||+.|+..... ..|.+|+..+++.+..
T Consensus 332 ~~~~~---~~~--~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d----g~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 332 WSYSS---SGL--TKQVDIPAHDTRVLYSALSPDGRILSTAASD----ENLKFWRVYDGDHVKR 386 (401)
T ss_dssp EEEET---TEE--EEEEEEECCSSCCCEEEECTTSSEEEEECTT----SEEEEEECCC------
T ss_pred EecCC---ccc--eeEEEecCCCCCEEEEEECCCCCEEEEEeCC----CcEEEEECCCCccccc
Confidence 88773 210 1222344433 46788999999988776432 4799999988775443
No 270
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.64 E-value=1.5e-13 Score=141.70 Aligned_cols=281 Identities=14% Similarity=0.057 Sum_probs=180.7
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCce
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~ 202 (776)
..+..+.|+| ||++|+.. .++.|.+|++.+++....+..... .+..+.|+|||+.|+..+. +.|.+|++.+++.
T Consensus 24 ~~v~~~~~s~---~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 24 KAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp SCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CcEEEEEECC---CCCEEEEeeCCCeEEEEeCCCcccchhhccCCC-ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE
Confidence 4688999999 99999876 688999999988877634544433 4788999999999998875 5799999998876
Q ss_pred eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCC
Q 004067 203 RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASN 282 (776)
Q Consensus 203 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 282 (776)
......... .+..+.|+||++.|+....+
T Consensus 100 ~~~~~~~~~-----------------~v~~~~~~~~~~~l~s~~~d---------------------------------- 128 (312)
T 4ery_A 100 LKTLKGHSN-----------------YVFCCNFNPQSNLIVSGSFD---------------------------------- 128 (312)
T ss_dssp EEEEECCSS-----------------CEEEEEECSSSSEEEEEETT----------------------------------
T ss_pred EEEEcCCCC-----------------CEEEEEEcCCCCEEEEEeCC----------------------------------
Confidence 543332211 14467899999988876643
Q ss_pred CeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCce
Q 004067 283 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 362 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 362 (776)
..|.+||+.+++....- ..+...+..+.|+|||+.++..+ .+..|.+||+.+++............
T Consensus 129 --~~i~iwd~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~~wd~~~~~~~~~~~~~~~~~ 194 (312)
T 4ery_A 129 --ESVRIWDVKTGKCLKTL--------PAHSDPVSAVHFNRDGSLIVSSS----YDGLCRIWDTASGQCLKTLIDDDNPP 194 (312)
T ss_dssp --SCEEEEETTTCCEEEEE--------CCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCCEEEEECCSSCCC
T ss_pred --CcEEEEECCCCEEEEEe--------cCCCCcEEEEEEcCCCCEEEEEe----CCCcEEEEECCCCceeeEEeccCCCc
Confidence 24799999987754331 34566788999999999777665 34469999998877543222111100
Q ss_pred eecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEE-EEEeec-CCCcEEEEEEccCCCce
Q 004067 363 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVE-QIVGVN-EASGQVYFTGTLDGPLE 439 (776)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~-~~~~~s-~dg~~i~~~~~~~~~~~ 439 (776)
. ..-.|+| ++.++++...+| .|.+||+..++. ..+..+..... -...++ ++++ +++.+..++.
T Consensus 195 ~-~~~~~~~--------~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~-- 260 (312)
T 4ery_A 195 V-SFVKFSP--------NGKYILAATLDN--TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNL-- 260 (312)
T ss_dssp E-EEEEECT--------TSSEEEEEETTT--EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC-EEEECCTTSC--
T ss_pred e-EEEEECC--------CCCEEEEEcCCC--eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc-EEEEECCCCE--
Confidence 0 0011222 233556666667 899999887654 33433321110 011234 4555 4555555543
Q ss_pred eeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 440 SHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 440 ~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
+.+|.+. .+. ....+..+. .+..++++|+++.|+....+.+. .|.+|+.
T Consensus 261 i~vwd~~---~~~----~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~--~i~~W~~ 310 (312)
T 4ery_A 261 VYIWNLQ---TKE----IVQKLQGHTDVVISTACHPTENIIASAALENDK--TIKLWKS 310 (312)
T ss_dssp EEEEETT---TCC----EEEEECCCSSCEEEEEECSSSSEEEEEECTTTC--CEEEEEC
T ss_pred EEEEECC---Cch----hhhhhhccCCcEEEEeecCcCCceEEEEccCCc--cEEEecC
Confidence 6666654 232 455565544 36788999999988877543332 4666553
No 271
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.64 E-value=3.9e-14 Score=154.14 Aligned_cols=276 Identities=9% Similarity=0.031 Sum_probs=158.0
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCc------------eEEeecCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCK------------QELVFSPPDGGLDENNISPEEKLRRERLRERG 124 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~------------~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 124 (776)
+..++|||||++||..+.+ ..|.+|++.+++ ...+..|... +..-. .....
T Consensus 31 V~~v~~s~~g~~la~g~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~------~~~~~------~~~~~ 93 (447)
T 3dw8_B 31 ISTVEFNHSGELLATGDKG-----GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPE------FDYLK------SLEIE 93 (447)
T ss_dssp EEEEEECSSSSEEEEEETT-----SEEEEEEECC-----CCCCCCEEEEEEEECCCCE------EEGGG------TEEEC
T ss_pred EEEEEECCCCCEEEEEcCC-----CeEEEEEecCCCCCCcccccceeEeccccccccc------ccccc------ccccc
Confidence 4889999999999976542 469999998876 3334333200 00000 00000
Q ss_pred CCeeeEEEeecCCCc--eEEEEe-CCCcEEEEeCCCCccc---------------------------------------e
Q 004067 125 LGVTRYEWVKTSSKK--KIIMVP-LPDGIYFQDLSCSKPE---------------------------------------L 162 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg--~~l~~~-~~~~l~~~d~~~~~~~---------------------------------------~ 162 (776)
..+....|+| ++ ..|+.. .++.|.+||+.+++.. .
T Consensus 94 ~~V~~l~~~~---~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 94 EKINKIRWLP---QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp CCCCEEEECC---CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred CceEEEEEcC---CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 3588999999 87 556554 7889999998764431 0
Q ss_pred ecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCC-CceeEEeeCCCCCceecCCcccceecccCCcceEEECCCC-C
Q 004067 163 KLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLI-NEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDS-K 240 (776)
Q Consensus 163 ~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~-g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg-~ 240 (776)
.+.......+..+.|+|||+.|+...++.|.+|++.+ +....+...... ...+. ...+..+.|+||| +
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~--------~~~v~~~~~~p~~~~ 240 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPA--NMEEL--------TEVITAAEFHPNSCN 240 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCS--SGGGC--------CCCEEEEEECSSCTT
T ss_pred EeccCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccc--ccccc--------CcceEEEEECCCCCc
Confidence 1122223347889999999999988667899999984 333332211000 00111 1225688999999 7
Q ss_pred eEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCce-----EEEEcccCCC---CCCCC
Q 004067 241 FIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV-----SWMDLQCGGT---DQNYD 312 (776)
Q Consensus 241 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~---~~~~~ 312 (776)
.|+..+.+ ..|.+||+.+++. ..+....... ....+
T Consensus 241 ~l~s~~~d------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (447)
T 3dw8_B 241 TFVYSSSK------------------------------------GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEI 284 (447)
T ss_dssp EEEEEETT------------------------------------SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHH
T ss_pred EEEEEeCC------------------------------------CeEEEEECcCCccccceeeEeccCCCcccccccccc
Confidence 77766543 2478999988774 4442110000 00001
Q ss_pred cceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC-CceEEEEEeccCceee------cccccccCCCCccccC-CeEE
Q 004067 313 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-GQRKVILVEELDSWVN------LHDCFTPLDKGVTKYS-GGFI 384 (776)
Q Consensus 313 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~ 384 (776)
...+..++|+|||++|+... . ..|.+||+.+ +............... ....+. ...+.+++ +.++
T Consensus 285 ~~~v~~~~~s~~g~~l~~~~----~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~--~~~~~~s~~~~~l 357 (447)
T 3dw8_B 285 ISSISDVKFSHSGRYMMTRD----Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD--KFECCWNGSDSVV 357 (447)
T ss_dssp TTCEEEEEECTTSSEEEEEE----S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC--CCCEEECTTSSEE
T ss_pred CceEEEEEECCCCCEEEEee----C-CeEEEEeCCCCccccceeecccccccccccccccccccc--ceEEEECCCCCEE
Confidence 12789999999999887654 3 5699999986 5543322222110000 000000 00012323 3355
Q ss_pred EEeccCCceEEEEEeCCCceeec
Q 004067 385 WASEKTGFRHLYLHDINGTCLGP 407 (776)
Q Consensus 385 ~~s~~~g~~~l~~~~~~g~~~~~ 407 (776)
++...+| .|++|++.+++...
T Consensus 358 ~s~s~dg--~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 358 MTGSYNN--FFRMFDRNTKRDIT 378 (447)
T ss_dssp EEECSTT--EEEEEETTTCCEEE
T ss_pred EEeccCC--EEEEEEcCCCccee
Confidence 6666677 89999998876544
No 272
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.63 E-value=2.2e-13 Score=140.85 Aligned_cols=276 Identities=11% Similarity=0.012 Sum_probs=177.6
Q ss_pred CCeeeEEEeecCCCc-eEEEEe-CCCcEEEEeCCCCccc-----eecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEe
Q 004067 125 LGVTRYEWVKTSSKK-KIIMVP-LPDGIYFQDLSCSKPE-----LKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLN 196 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg-~~l~~~-~~~~l~~~d~~~~~~~-----~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~ 196 (776)
..+....|+| ++ +.|+.. .++.|.+|++.+.... ..+..+.. .+....|+|||+.|+..+. +.|.+||
T Consensus 18 ~~V~~l~~~~---~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 18 GWVTSLATSA---GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH-IVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp SCEEEEEECS---SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceEEEEEccC---CCccEEEEecCCccEEEecCCCCCccccccceEEeCCcc-cEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 4688899998 87 555544 7889999998754321 13333333 4778899999999988874 5799999
Q ss_pred cCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCC
Q 004067 197 LLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYP 276 (776)
Q Consensus 197 l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (776)
+.+++..+....... .+..+.|+|+++.|+..+.+
T Consensus 94 ~~~~~~~~~~~~h~~-----------------~v~~~~~~~~~~~l~s~s~D---------------------------- 128 (319)
T 3frx_A 94 VATGETYQRFVGHKS-----------------DVMSVDIDKKASMIISGSRD---------------------------- 128 (319)
T ss_dssp TTTTEEEEEEECCSS-----------------CEEEEEECTTSCEEEEEETT----------------------------
T ss_pred CCCCCeeEEEccCCC-----------------cEEEEEEcCCCCEEEEEeCC----------------------------
Confidence 999876543332211 14578899999988877644
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe------EEEEEEeecCceEEEEEEECCCCc
Q 004067 277 FAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI------LTAQVLNRSQTKLKVLKFDIKTGQ 350 (776)
Q Consensus 277 ~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~------~l~~~~~~~~~~~~l~~~d~~~g~ 350 (776)
..|.+||+.+.....+ ..+...+..+.|+|+++ .++... .+..|.+||+.++.
T Consensus 129 --------~~i~vwd~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----~d~~i~~wd~~~~~ 187 (319)
T 3frx_A 129 --------KTIKVWTIKGQCLATL---------LGHNDWVSQVRVVPNEKADDDSVTIISAG----NDKMVKAWNLNQFQ 187 (319)
T ss_dssp --------SCEEEEETTSCEEEEE---------CCCSSCEEEEEECCC------CCEEEEEE----TTSCEEEEETTTTE
T ss_pred --------CeEEEEECCCCeEEEE---------eccCCcEEEEEEccCCCCCCCccEEEEEe----CCCEEEEEECCcch
Confidence 2378999987766655 55677788999999643 555544 34569999998877
Q ss_pred eEEEE-EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEE
Q 004067 351 RKVIL-VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVY 429 (776)
Q Consensus 351 ~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~ 429 (776)
..... .+....... .|+| ++.++++...+| .|.+||+.+++..........+..+ .|+|+|..++
T Consensus 188 ~~~~~~~h~~~v~~~---~~sp--------~g~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~~-~~sp~~~~la 253 (319)
T 3frx_A 188 IEADFIGHNSNINTL---TASP--------DGTLIASAGKDG--EIMLWNLAAKKAMYTLSAQDEVFSL-AFSPNRYWLA 253 (319)
T ss_dssp EEEEECCCCSCEEEE---EECT--------TSSEEEEEETTC--EEEEEETTTTEEEEEEECCSCEEEE-EECSSSSEEE
T ss_pred hheeecCCCCcEEEE---EEcC--------CCCEEEEEeCCC--eEEEEECCCCcEEEEecCCCcEEEE-EEcCCCCEEE
Confidence 54433 222222211 1333 334666666777 8999998877643333333445555 4999999766
Q ss_pred EEEccCCCceeeEEEEEeCCCCCCccccceeec---------CCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCC
Q 004067 430 FTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT---------NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 499 (776)
Q Consensus 430 ~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~---------~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~ 499 (776)
.... . ...+|.++. +. ....+. ....+..++|||||++|+..... ..|.+|++.+
T Consensus 254 ~~~~-~---~i~v~~~~~---~~----~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D----g~i~vWd~~t 317 (319)
T 3frx_A 254 AATA-T---GIKVFSLDP---QY----LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD----NVIRVWQVMT 317 (319)
T ss_dssp EEET-T---EEEEEEETT---EE----EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT----SCEEEEEEEE
T ss_pred EEcC-C---CcEEEEeCc---Ce----eeeccCccccccccCcCcceeEEEECCCCCEEEEeecC----ceEEEEEEee
Confidence 5543 2 256666542 10 111221 12235678999999998866433 3588888654
No 273
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.63 E-value=8.1e-15 Score=139.15 Aligned_cols=170 Identities=14% Similarity=0.084 Sum_probs=118.4
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
+.|.||++||.+++.. ..| ......+... ++.++.+|++. ....++.+.+..+.+.
T Consensus 16 ~~~~vv~~HG~~~~~~--~~~----~~~~~~~~~~---~~~v~~~~~~~---------------~~~~~~~~~~~~~~~~ 71 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD--EHW----QSHWERRFPH---WQRIRQREWYQ---------------ADLDRWVLAIRRELSV 71 (191)
T ss_dssp TTCEEEEECCTTCCCT--TSH----HHHHHHHCTT---SEECCCSCCSS---------------CCHHHHHHHHHHHHHT
T ss_pred CCceEEEECCCCCCch--hhH----HHHHHHhcCC---eEEEeccCCCC---------------cCHHHHHHHHHHHHHh
Confidence 3478999999876542 122 1122222223 35567776532 2255566666656554
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCc
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK 712 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 712 (776)
. + ++++++||||||.+++.++.++|++++++++.+|...... . .+. ...+.++++|
T Consensus 72 ~--~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~-------~---~~~-----------~~~~~~~~~P 127 (191)
T 3bdv_A 72 C--T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF-------E---IDD-----------RIQASPLSVP 127 (191)
T ss_dssp C--S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG-------T---CTT-----------TSCSSCCSSC
T ss_pred c--C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc-------c---Ccc-----------ccccccCCCC
Confidence 3 3 7999999999999999999999999999999998754321 0 000 0235677899
Q ss_pred EEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCC--CcHHHHHHHHHHHHHHh
Q 004067 713 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIERT 775 (776)
Q Consensus 713 ~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~fl~~~ 775 (776)
+|+++|++|..+|+..++.+.+.+ +.+++++++++|.+... ....+..+.+.+||++.
T Consensus 128 ~lii~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 128 TLTFASHNDPLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp EEEEECSSBTTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred EEEEecCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 999999999999999988888875 46899999999987332 13345559999998763
No 274
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.2e-13 Score=150.51 Aligned_cols=289 Identities=10% Similarity=-0.028 Sum_probs=183.5
Q ss_pred CeeeEEEeecCCCceEEEEeCCCcEEEEeCCCCc---cceecCCCC----------------------------------
Q 004067 126 GVTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSK---PELKLSSSS---------------------------------- 168 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~---~~~~l~~~~---------------------------------- 168 (776)
.+....|+| ||+.|+...++.|++||+.+|+ ....+....
T Consensus 6 p~~~v~~s~---dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 6 PLQNLLTSR---DGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCEEEECS---SSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cEEEEEecC---CCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 466778999 9998888888999999998887 221111100
Q ss_pred -------------------CCCccCceeCCCCCEEEEEE--CCcEEEEecC--CCceeEEeeC-CCCCceecCCccccee
Q 004067 169 -------------------CSPVIDPHLSSDGTMIAFVR--DCELHVLNLL--INEQRQLTHG-ANGNTVTHGLAEYIAQ 224 (776)
Q Consensus 169 -------------------~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~--~g~~~~lt~~-~~~~~~~~~~~~~~~~ 224 (776)
...+..++|||||+.|+++. ++.|.+|++. +++..+.... ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~------------- 149 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFS------------- 149 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECS-------------
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCC-------------
Confidence 01266789999999986665 3679999988 7765444321 110
Q ss_pred cccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEE--EEc
Q 004067 225 EEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSW--MDL 302 (776)
Q Consensus 225 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~--l~~ 302 (776)
..+..++|+|||+.|+....+ ..+++|++.+++... +..
T Consensus 150 ---~~v~~~~~sp~~~~l~~~~~~------------------------------------g~v~~~~~~~~~~~~~~~~~ 190 (450)
T 2vdu_B 150 ---KRPNAISIAEDDTTVIIADKF------------------------------------GDVYSIDINSIPEEKFTQEP 190 (450)
T ss_dssp ---SCEEEEEECTTSSEEEEEETT------------------------------------SEEEEEETTSCCCSSCCCCC
T ss_pred ---CCceEEEEcCCCCEEEEEeCC------------------------------------CcEEEEecCCccccccccee
Confidence 014578999999999877532 347888888766432 100
Q ss_pred ccCCCCCCCCcceEEEEEeccC---CeEEEEEEeecCceEEEEEEECCCCceEEE-E-EeccCceeecccccccCCCCcc
Q 004067 303 QCGGTDQNYDEEYLARVNWMHG---NILTAQVLNRSQTKLKVLKFDIKTGQRKVI-L-VEELDSWVNLHDCFTPLDKGVT 377 (776)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~SpD---g~~l~~~~~~~~~~~~l~~~d~~~g~~~~l-~-~~~~~~~~~~~~~~~~~~~~~~ 377 (776)
+..+...+..++|+|| +++|+..+ .+..|++||+.++..... . .+....+. +.
T Consensus 191 ------~~~h~~~v~~~~~sp~~~~~~~l~s~~----~d~~i~vwd~~~~~~~~~~~~~h~~~v~~------------~~ 248 (450)
T 2vdu_B 191 ------ILGHVSMLTDVHLIKDSDGHQFIITSD----RDEHIKISHYPQCFIVDKWLFGHKHFVSS------------IC 248 (450)
T ss_dssp ------SEECSSCEEEEEEEECTTSCEEEEEEE----TTSCEEEEEESCTTCEEEECCCCSSCEEE------------EE
T ss_pred ------eecccCceEEEEEcCCCCCCcEEEEEc----CCCcEEEEECCCCceeeeeecCCCCceEE------------EE
Confidence 1345667899999999 88777665 345699999988875433 2 22222111 12
Q ss_pred ccCCeEEEEeccCCceEEEEEeCCCcee-ecccc-------------------------CCeEEEEEEeecCCCcEEEEE
Q 004067 378 KYSGGFIWASEKTGFRHLYLHDINGTCL-GPITE-------------------------GDWMVEQIVGVNEASGQVYFT 431 (776)
Q Consensus 378 ~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~-------------------------~~~~~~~~~~~s~dg~~i~~~ 431 (776)
+.++.++++...++ .|++||+.+++. ..+.. ....+..+ .|+++++.|++.
T Consensus 249 ~sd~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i-~~~~~~~~l~~~ 325 (450)
T 2vdu_B 249 CGKDYLLLSAGGDD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKI-IKSKNLPFVAFF 325 (450)
T ss_dssp ECSTTEEEEEESSS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEE-EECSSSSEEEEE
T ss_pred ECCCCEEEEEeCCC--eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEE-EEeCCCCEEEEE
Confidence 22334566666666 899999887653 33321 12334454 489999988887
Q ss_pred EccCCCceeeEEEE-EeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCC------EEEEEEcCCCc
Q 004067 432 GTLDGPLESHLYCA-KLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPP------RILLCSLQDGS 501 (776)
Q Consensus 432 ~~~~~~~~~~l~~~-~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~------~i~~~~~~~~~ 501 (776)
+..++ .+.+|.+ +. .+. .......+.....+..+.|+|++ +++...+...|. ++|.++..++.
T Consensus 326 ~~~d~--~i~iw~~~~~--~~~-~l~~~~~~~~~~~v~~~~~~~~~--~~v~~~~~~~~~~~~~~i~v~~~~~~~~~ 395 (450)
T 2vdu_B 326 VEATK--CIIILEMSEK--QKG-DLALKQIITFPYNVISLSAHNDE--FQVTLDNKESSGVQKNFAKFIEYNLNENS 395 (450)
T ss_dssp ETTCS--EEEEEEECSS--STT-CEEEEEEEECSSCEEEEEEETTE--EEEEECCTTCCSSCCCSEEEEEEETTTTE
T ss_pred ECCCC--eEEEEEeccC--CCC-ceeeccEeccCCceEEEEecCCc--EEEEEecccCCCCCCcceEEEEEEcCCCe
Confidence 75543 3788888 22 221 11134455555567788999953 555555555554 88888876665
No 275
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.63 E-value=7e-13 Score=150.66 Aligned_cols=205 Identities=13% Similarity=0.033 Sum_probs=135.5
Q ss_pred CCceeEcC--CCCEEEEEeCCCCcCcceEEEEecCCC------ceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 004067 57 PTSIGFSP--DDNLITYLLSPDHSLSRKVFSFDPKTC------KQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVT 128 (776)
Q Consensus 57 ~~~~~~Sp--DG~~ia~~~~~~~~~~~~l~~~~~~~~------~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 128 (776)
+..++||| ||++|+..+.+ ..|.+|++.++ +.+.+.... .+...+.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~---------------------~~~~~v~ 120 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDES-----GKVIVWGWTFDKESNSVEVNVKSEFQ---------------------VLAGPIS 120 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETT-----SEEEEEEEEEEGGGTEEEEEEEEEEE---------------------CCSSCEE
T ss_pred EEEEEECcCCCCCEEEEecCC-----CEEEEEeCCCCcccccccccccchhh---------------------cccccEE
Confidence 47889999 99999976552 46999999755 222222110 0124688
Q ss_pred eEEEeecCCCceEEEEeCC-----CcEEEEeCCCCccceecCCCCCCCccCceeCCCCC-EEEEEEC-CcEEEEecCCCc
Q 004067 129 RYEWVKTSSKKKIIMVPLP-----DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGT-MIAFVRD-CELHVLNLLINE 201 (776)
Q Consensus 129 ~~~~sp~~~dg~~l~~~~~-----~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~-~la~~~~-~~l~~~~l~~g~ 201 (776)
...|+| ||+.|+.... +.|++|| .++....+..... .+..+.|+|||+ .++.... +.|.+|++.+++
T Consensus 121 ~~~~s~---~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~ 194 (615)
T 1pgu_A 121 DISWDF---EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ-RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 194 (615)
T ss_dssp EEEECT---TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSS-CEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred EEEEeC---CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCc-cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc
Confidence 999999 9999998744 4788888 3333325554443 488899999998 5555554 579999998887
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECCC-CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD-SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
.......... . ...+..+.|+|| |+.|+....+
T Consensus 195 ~~~~~~~~~~----~----------~~~v~~~~~~~~~~~~l~~~~~d-------------------------------- 228 (615)
T 1pgu_A 195 FSASDRTHHK----Q----------GSFVRDVEFSPDSGEFVITVGSD-------------------------------- 228 (615)
T ss_dssp EEEEECSSSC----T----------TCCEEEEEECSTTCCEEEEEETT--------------------------------
T ss_pred eeeeecccCC----C----------CceEEEEEECCCCCCEEEEEeCC--------------------------------
Confidence 6543322110 0 001457889999 9988876643
Q ss_pred CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE
Q 004067 281 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 352 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~ 352 (776)
..|++||+.+++....-... ...+...+..+.|+ |++.++... .+..|.+||+.+++..
T Consensus 229 ----g~i~vwd~~~~~~~~~~~~~----~~~~~~~v~~~~~~-~~~~l~~~~----~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 229 ----RKISCFDGKSGEFLKYIEDD----QEPVQGGIFALSWL-DSQKFATVG----ADATIRVWDVTTSKCV 287 (615)
T ss_dssp ----CCEEEEETTTCCEEEECCBT----TBCCCSCEEEEEES-SSSEEEEEE----TTSEEEEEETTTTEEE
T ss_pred ----CeEEEEECCCCCEeEEeccc----ccccCCceEEEEEc-CCCEEEEEc----CCCcEEEEECCCCcEE
Confidence 24789999888765541000 00466778899999 888777665 3345778888766543
No 276
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.63 E-value=1.6e-13 Score=143.35 Aligned_cols=259 Identities=9% Similarity=0.038 Sum_probs=154.3
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecC--CCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEe
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPK--TCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWV 133 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~--~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s 133 (776)
.+..++|||||++|++....+ ..|.+|+++ +++.+.+..... ...+..+.|+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~s 92 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPE----FRVLAYRIAPDDGALTFAAESAL----------------------PGSLTHISTD 92 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTT----TEEEEEEECTTTCCEEEEEEEEC----------------------SSCCSEEEEC
T ss_pred CCceEEECCCCCEEEEeecCC----CeEEEEEecCCCCceeecccccc----------------------CCCCcEEEEc
Confidence 458899999999998877643 357777776 777665543211 1246678999
Q ss_pred ecCCCceEEEEeC--CCcEEEEeCCCC---ccceecCCCCCCCccCceeCCCCCEEEEEE--CCcEEEEecCC-CceeEE
Q 004067 134 KTSSKKKIIMVPL--PDGIYFQDLSCS---KPELKLSSSSCSPVIDPHLSSDGTMIAFVR--DCELHVLNLLI-NEQRQL 205 (776)
Q Consensus 134 p~~~dg~~l~~~~--~~~l~~~d~~~~---~~~~~l~~~~~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~~-g~~~~l 205 (776)
| ||++|++.. ++.|++||+..+ +.. ....... .+..+.|||||+.|+... ++.|+++++.+ ++...+
T Consensus 93 ~---dg~~l~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 93 H---QGQFVFVGSYNAGNVSVTRLEDGLPVGVV-DVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp T---TSSEEEEEETTTTEEEEEEEETTEEEEEE-EEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred C---CCCEEEEEecCCCeEEEEECCCCcccccc-ccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 9 999998773 567999999433 222 2222222 367899999999987775 46799999987 765533
Q ss_pred e----eCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 206 T----HGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 206 t----~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
. ....+ .....+.|+|||+.|++.....
T Consensus 168 ~~~~~~~~~~----------------~~~~~~~~~pdg~~l~~~~~~~-------------------------------- 199 (343)
T 1ri6_A 168 DPAEVTTVEG----------------AGPRHMVFHPNEQYAYCVNELN-------------------------------- 199 (343)
T ss_dssp EEEEEECSTT----------------CCEEEEEECTTSSEEEEEETTT--------------------------------
T ss_pred cccccccCCC----------------CCcceEEECCCCCEEEEEeCCC--------------------------------
Confidence 2 11110 0133678999999887765221
Q ss_pred CCeEEEEEEEcC--CCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECC--CCceEEEEEe
Q 004067 282 NVKVRLGVVSAA--GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK--TGQRKVILVE 357 (776)
Q Consensus 282 ~~~~~l~~~d~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~--~g~~~~l~~~ 357 (776)
..+.+|+++ +++...+......+...........++|+|||+.|++.. .. ...|.+||++ ++..+.+..-
T Consensus 200 ---~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~-~~--~~~i~v~d~~~~~~~~~~~~~~ 273 (343)
T 1ri6_A 200 ---SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD-RT--ASLITVFSVSEDGSVLSKEGFQ 273 (343)
T ss_dssp ---TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE-TT--TTEEEEEEECTTSCCEEEEEEE
T ss_pred ---CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe-cC--CCEEEEEEEcCCCCceEEeeee
Confidence 246788874 455432221111110012234566799999999776553 22 3457788876 6665555432
Q ss_pred ccCceeecccccccCCCCccccC-CeEEEEe-ccCCceEEEEEeCCCceeeccc
Q 004067 358 ELDSWVNLHDCFTPLDKGVTKYS-GGFIWAS-EKTGFRHLYLHDINGTCLGPIT 409 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s-~~~g~~~l~~~~~~g~~~~~lt 409 (776)
..... ...+.+++ +..++++ ..++.-.+|.++.++++.+.+.
T Consensus 274 ~~~~~----------~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 274 PTETQ----------PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp ECSSS----------CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred cCCCc----------cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 21111 01112222 3344444 4567556666677777655443
No 277
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.1e-13 Score=148.50 Aligned_cols=162 Identities=9% Similarity=0.041 Sum_probs=116.8
Q ss_pred CeeeEEEeecCCCceEE-EEe-CCCcEEEEeCC--CCccceecCC-CCCCCccCceeCCCCCEEEEEEC-CcEEEEecCC
Q 004067 126 GVTRYEWVKTSSKKKII-MVP-LPDGIYFQDLS--CSKPELKLSS-SSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLI 199 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l-~~~-~~~~l~~~d~~--~~~~~~~l~~-~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~ 199 (776)
.+..+.|+| ||++| +.. .++.|.+||+. +++....+.. .....+..+.|+|||+.|+.... +.++++++.+
T Consensus 104 ~v~~~~~s~---d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTS---DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINS 180 (450)
T ss_dssp CEEEEEECT---TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred ceEEEEEcC---CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCC
Confidence 588999999 99997 444 67889999998 7766534431 11224778999999999998875 5799999987
Q ss_pred CceeE-----EeeCCCCCceecCCcccceecccCCcceEEECCC---CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcc
Q 004067 200 NEQRQ-----LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD---SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQE 271 (776)
Q Consensus 200 g~~~~-----lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (776)
+.... +... ...+..+.|+|| ++.|+....+
T Consensus 181 ~~~~~~~~~~~~~h------------------~~~v~~~~~sp~~~~~~~l~s~~~d----------------------- 219 (450)
T 2vdu_B 181 IPEEKFTQEPILGH------------------VSMLTDVHLIKDSDGHQFIITSDRD----------------------- 219 (450)
T ss_dssp CCCSSCCCCCSEEC------------------SSCEEEEEEEECTTSCEEEEEEETT-----------------------
T ss_pred cccccccceeeecc------------------cCceEEEEEcCCCCCCcEEEEEcCC-----------------------
Confidence 76432 1111 112557899999 8888776543
Q ss_pred eecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce
Q 004067 272 DHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 351 (776)
Q Consensus 272 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~ 351 (776)
..|++||+.+++...... ..+...+..++|+ ||++|+..+ .+..|.+||+.+++.
T Consensus 220 -------------~~i~vwd~~~~~~~~~~~-------~~h~~~v~~~~~s-d~~~l~s~~----~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 220 -------------EHIKISHYPQCFIVDKWL-------FGHKHFVSSICCG-KDYLLLSAG----GDDKIFAWDWKTGKN 274 (450)
T ss_dssp -------------SCEEEEEESCTTCEEEEC-------CCCSSCEEEEEEC-STTEEEEEE----SSSEEEEEETTTCCE
T ss_pred -------------CcEEEEECCCCceeeeee-------cCCCCceEEEEEC-CCCEEEEEe----CCCeEEEEECCCCcE
Confidence 247899998887543322 3566789999999 999888765 455799999999886
Q ss_pred EEEEE
Q 004067 352 KVILV 356 (776)
Q Consensus 352 ~~l~~ 356 (776)
.....
T Consensus 275 ~~~~~ 279 (450)
T 2vdu_B 275 LSTFD 279 (450)
T ss_dssp EEEEE
T ss_pred eeeec
Confidence 55443
No 278
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.62 E-value=1e-13 Score=147.33 Aligned_cols=287 Identities=13% Similarity=0.117 Sum_probs=180.0
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+-.+. ...|.+||+.+++........ ...+....|+|
T Consensus 69 V~~~~~sp~~~~l~s~s~-----D~~v~iWd~~~~~~~~~~~~h-----------------------~~~v~~~~~s~-- 118 (380)
T 3iz6_a 69 VYSLDWTPEKNWIVSASQ-----DGRLIVWNALTSQKTHAIKLH-----------------------CPWVMECAFAP-- 118 (380)
T ss_dssp EEEEEECTTSSCEEEEET-----TSEEEEEETTTTEEEEEEECC-----------------------CTTCCCCEECT--
T ss_pred EEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCccceEEecC-----------------------CCCEEEEEECC--
Confidence 588999999999986554 247999999988764433211 13577889999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccc-------eecCCCCCCCccCceeCCCCCE-EEEEE-CCcEEEEecCCCceeEEe
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPE-------LKLSSSSCSPVIDPHLSSDGTM-IAFVR-DCELHVLNLLINEQRQLT 206 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~-------~~l~~~~~~~~~~~~~SpDg~~-la~~~-~~~l~~~~l~~g~~~~lt 206 (776)
||+.|+.. .++.+.+||+.+.... ..++.+. ..+....|+|++.. |+..+ ++.|.+||+.+++.....
T Consensus 119 -~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~-~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 196 (380)
T 3iz6_a 119 -NGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHK-GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF 196 (380)
T ss_dssp -TSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCS-SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred -CCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCC-cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence 99999886 6788999998764311 1233333 34778899998654 44443 356999999998765543
Q ss_pred eCCCCCceecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 207 HGANGNTVTHGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
.... ..+.. ..+..+.|+| |++.|+..+.| .
T Consensus 197 ~~~~----~~~h~--------~~v~~~~~~~~~~~~l~sgs~D------------------------------------~ 228 (380)
T 3iz6_a 197 GSEF----PSGHT--------ADVLSLSINSLNANMFISGSCD------------------------------------T 228 (380)
T ss_dssp CCCS----SSSCC--------SCEEEEEECSSSCCEEEEEETT------------------------------------S
T ss_pred eccc----CCCCc--------cCeEEEEeecCCCCEEEEEECC------------------------------------C
Confidence 2110 00111 1134677876 77777766543 2
Q ss_pred EEEEEEcCC-Cc-eEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCcee
Q 004067 286 RLGVVSAAG-GP-VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 363 (776)
Q Consensus 286 ~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 363 (776)
.|.+||+.. ++ ...+ ..+...+..++|+|||+.++..+ .+..|.+||+.++............-.
T Consensus 229 ~v~~wd~~~~~~~~~~~---------~~h~~~v~~v~~~p~~~~l~s~s----~D~~i~lwd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 229 TVRLWDLRITSRAVRTY---------HGHEGDINSVKFFPDGQRFGTGS----DDGTCRLFDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp CEEEEETTTTCCCCEEE---------CCCSSCCCEEEECTTSSEEEEEC----SSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred eEEEEECCCCCcceEEE---------CCcCCCeEEEEEecCCCeEEEEc----CCCeEEEEECCCCcEEEEecccccccc
Confidence 478999873 33 2333 45677889999999999877665 455699999999876555432211000
Q ss_pred ecccccccCCCCcccc-CCeEEEEeccCCceEEEEEeCCCcee-ecc----ccCCeEEEEEEeecCCCcEEEEEEccCCC
Q 004067 364 NLHDCFTPLDKGVTKY-SGGFIWASEKTGFRHLYLHDINGTCL-GPI----TEGDWMVEQIVGVNEASGQVYFTGTLDGP 437 (776)
Q Consensus 364 ~~~~~~~~~~~~~~~~-~~~~~~~s~~~g~~~l~~~~~~g~~~-~~l----t~~~~~~~~~~~~s~dg~~i~~~~~~~~~ 437 (776)
.. .+.-..++++ ++.++++...+| .|++||...++. ..+ ..+...+..+ .|+|||+.| ++++.++.
T Consensus 296 ~~----~~~v~~~~~s~~g~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l-~~s~dg~~l-~sgs~D~~ 367 (380)
T 3iz6_a 296 NE----LPIVTSVAFSISGRLLFAGYSNG--DCYVWDTLLAEMVLNLGTLQNSHEGRISCL-GLSSDGSAL-CTGSWDKN 367 (380)
T ss_dssp CS----SCSCSEEEECSSSSEEEEECTTS--CEEEEETTTCCEEEEECCSCSSCCCCCCEE-EECSSSSEE-EEECTTSC
T ss_pred cc----cCceEEEEECCCCCEEEEEECCC--CEEEEECCCCceEEEEecccCCCCCceEEE-EECCCCCEE-EEeeCCCC
Confidence 00 0000111222 344666666677 899999766543 233 2334445555 499999964 45555544
Q ss_pred ceeeEEEEE
Q 004067 438 LESHLYCAK 446 (776)
Q Consensus 438 ~~~~l~~~~ 446 (776)
+.+|.+.
T Consensus 368 --i~iW~~~ 374 (380)
T 3iz6_a 368 --LKIWAFS 374 (380)
T ss_dssp --EEEEECC
T ss_pred --EEEEecC
Confidence 7888765
No 279
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.62 E-value=1.6e-13 Score=143.88 Aligned_cols=270 Identities=11% Similarity=0.061 Sum_probs=150.2
Q ss_pred cCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 55 VAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 55 ~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
..+..++|||||+ |++.....+ ...|++|++++++.+++..... .......+.|+|
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~--~~~v~~~~~~~g~~~~~~~~~~---------------------~~~~p~~~a~sp 95 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDD--EGGIAAWQIDGQTAHKLNTVVA---------------------PGTPPAYVAVDE 95 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETT--EEEEEEEEEETTEEEEEEEEEE---------------------ESCCCSEEEEET
T ss_pred CCcceEEEccCCe-EEEEEecCC--CceEEEEEecCCcEEEeeeeec---------------------CCCCCEEEEECC
Confidence 3458899999999 766655211 3579999999888766653100 123466789999
Q ss_pred cCCCceEEEEeC--CCcEEEEeCC-CCccce--ecCCCC--------CCCccCceeCCCCCEEEEEEC--CcEEEEecC-
Q 004067 135 TSSKKKIIMVPL--PDGIYFQDLS-CSKPEL--KLSSSS--------CSPVIDPHLSSDGTMIAFVRD--CELHVLNLL- 198 (776)
Q Consensus 135 ~~~dg~~l~~~~--~~~l~~~d~~-~~~~~~--~l~~~~--------~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~- 198 (776)
||++|++.. ++.|.+|++. ++.... .+.... ...+..+.|||||+ ++.... +.|++++++
T Consensus 96 ---dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 96 ---ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp ---TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECT
T ss_pred ---CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECC
Confidence 999998873 5679999985 343331 111110 01244589999999 544442 469999998
Q ss_pred CCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCC
Q 004067 199 INEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 278 (776)
Q Consensus 199 ~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (776)
+|+...+...... .+. ....++|+|||+.|++.....
T Consensus 172 ~g~~~~~~~~~~~----~g~----------~p~~~~~spdg~~l~v~~~~~----------------------------- 208 (347)
T 3hfq_A 172 AGQLSEQSVLTME----AGF----------GPRHLVFSPDGQYAFLAGELS----------------------------- 208 (347)
T ss_dssp TSCEEEEEEEECC----TTC----------CEEEEEECTTSSEEEEEETTT-----------------------------
T ss_pred CCcEEEeeeEEcC----CCC----------CCceEEECCCCCEEEEEeCCC-----------------------------
Confidence 6665544321100 000 023678999999887654321
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECC-CCceEEEEEe
Q 004067 279 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQRKVILVE 357 (776)
Q Consensus 279 g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~-~g~~~~l~~~ 357 (776)
....++.++..+++...+......+...........++|||||++|+.... . ...|.+|+++ +|..+.+..-
T Consensus 209 ----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~-~--~~~v~v~~~~~~g~~~~~~~~ 281 (347)
T 3hfq_A 209 ----SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR-G--YNTLAVFAVTADGHLTLIQQI 281 (347)
T ss_dssp ----TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE-T--TTEEEEEEECGGGCEEEEEEE
T ss_pred ----CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC-C--CCEEEEEEECCCCcEEEeEEE
Confidence 113333344435665443221111111112246788999999997765543 2 2347777775 3455544332
Q ss_pred ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccc
Q 004067 358 ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT 409 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt 409 (776)
.........-.|+| +++.++.....++.-.+|.++.++++.+.+.
T Consensus 282 ~~~~~~~~~~~~sp-------dg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 282 STEGDFPRDFDLDP-------TEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp ECSSSCCCEEEECT-------TSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred ecCCCCcCeEEECC-------CCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 22100000111222 2223444444456556666687777666554
No 280
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.62 E-value=1.4e-13 Score=162.10 Aligned_cols=282 Identities=9% Similarity=0.023 Sum_probs=186.6
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCce
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~ 202 (776)
..+..+.|+| ||++|++. .++.|.+||+.+++....+..... .+..+.|||||+.|+.... +.|.+|++.+++.
T Consensus 14 ~~v~~i~~sp---~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 14 DRVKGIDFHP---TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (814)
T ss_dssp SCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred CceEEEEECC---CCCEEEEEeCCCEEEEEECCCCceEEEEecCCC-cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 4688999999 99999987 577899999998877645554443 5889999999999999876 5799999998876
Q ss_pred eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCC
Q 004067 203 RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASN 282 (776)
Q Consensus 203 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 282 (776)
......... .+..+.|+|||+.|+....+
T Consensus 90 ~~~~~~~~~-----------------~v~~~~~s~~~~~l~~~~~d---------------------------------- 118 (814)
T 3mkq_A 90 VVDFEAHPD-----------------YIRSIAVHPTKPYVLSGSDD---------------------------------- 118 (814)
T ss_dssp EEEEECCSS-----------------CEEEEEECSSSSEEEEEETT----------------------------------
T ss_pred EEEEecCCC-----------------CEEEEEEeCCCCEEEEEcCC----------------------------------
Confidence 543332211 14578999999998876532
Q ss_pred CeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc-CCeEEEEEEeecCceEEEEEEECCCCceEEEEEec--c
Q 004067 283 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE--L 359 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~ 359 (776)
..|.+||+.++....... ..+...+..++|+| |++.++..+ .+..|.+||+.++......... .
T Consensus 119 --g~i~vw~~~~~~~~~~~~-------~~~~~~v~~~~~~p~~~~~l~~~~----~dg~v~vwd~~~~~~~~~~~~~~~~ 185 (814)
T 3mkq_A 119 --LTVKLWNWENNWALEQTF-------EGHEHFVMCVAFNPKDPSTFASGC----LDRTVKVWSLGQSTPNFTLTTGQER 185 (814)
T ss_dssp --SEEEEEEGGGTSEEEEEE-------ECCSSCEEEEEEETTEEEEEEEEE----TTSEEEEEETTCSSCSEEEECCCTT
T ss_pred --CEEEEEECCCCceEEEEE-------cCCCCcEEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCcceeEEecCCCC
Confidence 357899998773322222 35667789999999 777777665 3457999999877654433322 1
Q ss_pred CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCc
Q 004067 360 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL 438 (776)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~ 438 (776)
.... ..|.|.+ ++.++++...+| .|.+|+..+++ ...+..+...+..+. |+|+|+.++..+ .++.
T Consensus 186 ~v~~---~~~~~~~------~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~-~dg~- 251 (814)
T 3mkq_A 186 GVNY---VDYYPLP------DKPYMITASDDL--TIKIWDYQTKSCVATLEGHMSNVSFAV-FHPTLPIIISGS-EDGT- 251 (814)
T ss_dssp CCCE---EEECCST------TCCEEEEECTTS--EEEEEETTTTEEEEEEECCSSCEEEEE-ECSSSSEEEEEE-TTSC-
T ss_pred CEEE---EEEEECC------CCCEEEEEeCCC--EEEEEECCCCcEEEEEcCCCCCEEEEE-EcCCCCEEEEEe-CCCe-
Confidence 1111 1122211 334666666777 89999987665 444555555566554 999999655544 3332
Q ss_pred eeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCC
Q 004067 439 ESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 499 (776)
Q Consensus 439 ~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~ 499 (776)
+.+|.+. .+. ....+.... .+..++|+|+|+.+++...... .+.+++...
T Consensus 252 -v~vwd~~---~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 302 (814)
T 3mkq_A 252 -LKIWNSS---TYK----VEKTLNVGLERSWCIATHPTGRKNYIASGFDN---GFTVLSLGN 302 (814)
T ss_dssp -EEEEETT---TCS----EEEEECCSSSSEEEEEECTTCGGGEEEEEETT---EEEEEECSC
T ss_pred -EEEEECC---CCc----EEEEeecCCCcEEEEEEccCCCceEEEEEeCC---CEEEEEcCC
Confidence 6666543 232 344454443 4678899999986533333322 456666543
No 281
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.62 E-value=1.7e-15 Score=152.57 Aligned_cols=227 Identities=11% Similarity=0.040 Sum_probs=139.4
Q ss_pred cCCCCceEEEEEcCC-CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECC
Q 004067 519 LQLEPPDIVQIQAND-GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDN 596 (776)
Q Consensus 519 ~~~~~~~~~~~~~~d-g~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~ 596 (776)
..+...+.+.+.+.. +..+.+++|.|++.. ..+++|+|+++||+..... ......+.+++ .+..|+.+++
T Consensus 8 ~~~~~~~~~~~~S~~~~~~~~~~vylP~~y~-~~~~yPvly~l~G~~~~~~-------~~~~~~~~l~~~~~~ivV~v~~ 79 (278)
T 2gzs_A 8 SVFYHFSATSFDSVDGTRHYRVWTAVPNTTA-PASGYPILYMLDGNAVMDR-------LDDELLKQLSEKTPPVIVAVGY 79 (278)
T ss_dssp CSSEEEEEEEEECTTSSCEEEEEEEEESSCC-CTTCEEEEEESSHHHHHHH-------CCHHHHHHHTTSCCCEEEEEEE
T ss_pred CCCCceEEEEEEcCCCCceEEEEEECCCCCC-CCCCCCEEEEeeChhHHHH-------HHHHHHHHhccCCCeEEEEEcC
Confidence 345667888898875 688999999998863 2368999888887533211 11112344554 6788888888
Q ss_pred CCCCCC-----chhhhhhh-h------h---ccCCccHHHHHHHH-----HHHHHcCCCCCCcEEEEeechHHHHHHHHH
Q 004067 597 RGTARR-----GLKFEASI-K------H---NCGRIDAEDQLTGA-----EWLIKQGLAKVGHIGLYGWSYGGYLSAITL 656 (776)
Q Consensus 597 rg~g~~-----~~~~~~~~-~------~---~~~~~~~~D~~~~i-----~~l~~~~~id~~~i~l~G~S~GG~~a~~~a 656 (776)
++.... +.++.... . . ........++...+ .++.++..++.++++|+||||||++|+.++
T Consensus 80 ~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~ 159 (278)
T 2gzs_A 80 QTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSW 159 (278)
T ss_dssp SSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHH
T ss_pred CCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHH
Confidence 743211 11111110 0 0 00001122322222 233344557888999999999999999999
Q ss_pred hhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCCCcEEEEecCCCCcc--------ChHH
Q 004067 657 ARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENV--------HFRH 728 (776)
Q Consensus 657 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v--------~~~~ 728 (776)
.+ |+.|+++++.+|...|.... .+ .. ...... . ..-..|+++.+|+.|... +..+
T Consensus 160 ~~-p~~f~~~~~~s~~~~~~~~~-~~-~~-----------~~~~~~--~-~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~ 222 (278)
T 2gzs_A 160 LS-SSYFRSYYSASPSLGRGYDA-LL-SR-----------VTAVEP--L-QFCTKHLAIMEGSATQGDNRETHAVGVLSK 222 (278)
T ss_dssp HH-CSSCSEEEEESGGGSTTHHH-HH-HH-----------HHTSCT--T-TTTTCEEEEEECCC-----------CHHHH
T ss_pred hC-ccccCeEEEeCcchhcCcch-HH-HH-----------HHHhhc--c-CCCCCcEEEEecCccccccccchhhhhHHH
Confidence 99 99999999999875443100 00 00 000000 0 012358999999999764 3688
Q ss_pred HHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 729 TARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 729 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
+.++++.|++.|.++++.++|+++|.... ...+ ...++||.+
T Consensus 223 ~~~~~~~L~~~g~~~~~~~~~g~~H~~~~---~~~~-~~~l~fl~~ 264 (278)
T 2gzs_A 223 IHTTLTILKDKGVNAVFWDFPNLGHGPMF---NASF-RQALLDISG 264 (278)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCCHHHHH---HHHH-HHHHHHHTT
T ss_pred HHHHHHHHHcCCCeeEEEEcCCCCccchh---HHHH-HHHHHHHhh
Confidence 99999999999999999999999997532 2222 345557654
No 282
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.61 E-value=4.2e-13 Score=143.43 Aligned_cols=286 Identities=11% Similarity=-0.009 Sum_probs=181.2
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCc-------eEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeee
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCK-------QELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTR 129 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~-------~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 129 (776)
+..++|+| +.|+..+. + ..|++|++.+++ ...+..+. ..+..
T Consensus 19 i~~~~~~~--~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~h~------------------------~~v~~ 67 (397)
T 1sq9_A 19 IFSVSACN--SFTVSCSG-D----GYLKVWDNKLLDNENPKDKSYSHFVHK------------------------SGLHH 67 (397)
T ss_dssp EEEEEECS--SEEEEEET-T----SEEEEEESBCCTTCCGGGGEEEEECCT------------------------TCEEE
T ss_pred eEEEEecC--CeEEEEcC-C----CEEEEEECCCcccccCCCcceEEecCC------------------------CcEEE
Confidence 47889999 67775544 2 479999999887 45555432 36889
Q ss_pred EEEeecCCC----c---eEEEEe-CCCcEEEEeCCCCcc-----ceecCCCC----CCCccCceeC----CCCCE-EEEE
Q 004067 130 YEWVKTSSK----K---KIIMVP-LPDGIYFQDLSCSKP-----ELKLSSSS----CSPVIDPHLS----SDGTM-IAFV 187 (776)
Q Consensus 130 ~~~sp~~~d----g---~~l~~~-~~~~l~~~d~~~~~~-----~~~l~~~~----~~~~~~~~~S----pDg~~-la~~ 187 (776)
..|+| + | +.|+.. .++.|++||+.+++. ...+.... ...+..+.|+ ||++. |+..
T Consensus 68 ~~~~~---~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 144 (397)
T 1sq9_A 68 VDVLQ---AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT 144 (397)
T ss_dssp EEEEE---EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE
T ss_pred EEEec---ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEE
Confidence 99999 9 8 888875 688999999998884 32554442 2347889999 99999 7777
Q ss_pred EC-CcEEEEecCC------Ccee------EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCe
Q 004067 188 RD-CELHVLNLLI------NEQR------QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPR 254 (776)
Q Consensus 188 ~~-~~l~~~~l~~------g~~~------~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 254 (776)
.. +.|++|++.+ ++.. .+...-. ........+..+.|+||| .|+....+
T Consensus 145 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~i~~~~~~~~~-~l~~~~~d------ 206 (397)
T 1sq9_A 145 DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE-----------SPMTPSQFATSVDISERG-LIATGFNN------ 206 (397)
T ss_dssp ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEEC-----------CSSSSCCCCCEEEECTTS-EEEEECTT------
T ss_pred eCCCcEEEEeCCccccccccceeeccCcceeeeeec-----------cccCCCCCceEEEECCCc-eEEEEeCC------
Confidence 64 5799999987 4332 2211000 000011125688999999 66654422
Q ss_pred EEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCC---cceEEEEEeccCCeEEEEE
Q 004067 255 FRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYD---EEYLARVNWMHGNILTAQV 331 (776)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~SpDg~~l~~~ 331 (776)
..|.+||+.+++....-.. ...+ ...+..+.|+|||+.|+..
T Consensus 207 ------------------------------g~i~i~d~~~~~~~~~~~~-----~~~h~~~~~~i~~i~~~~~~~~l~~~ 251 (397)
T 1sq9_A 207 ------------------------------GTVQISELSTLRPLYNFES-----QHSMINNSNSIRSVKFSPQGSLLAIA 251 (397)
T ss_dssp ------------------------------SEEEEEETTTTEEEEEEEC-----CC---CCCCCEEEEEECSSTTEEEEE
T ss_pred ------------------------------CcEEEEECCCCceeEEEec-----cccccccCCccceEEECCCCCEEEEE
Confidence 3589999998765433110 0114 6678999999999987766
Q ss_pred EeecCceEEEEEEECCCCceEEEEEe--------------ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEE
Q 004067 332 LNRSQTKLKVLKFDIKTGQRKVILVE--------------ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYL 397 (776)
Q Consensus 332 ~~~~~~~~~l~~~d~~~g~~~~l~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~ 397 (776)
...+ ....|.+||+.+++....... ...... -.|+| ++.++++...+| .|++
T Consensus 252 ~~d~-~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~--------~~~~l~~~~~dg--~i~i 317 (397)
T 1sq9_A 252 HDSN-SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS---LSFND--------SGETLCSAGWDG--KLRF 317 (397)
T ss_dssp EEET-TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEE---EEECS--------SSSEEEEEETTS--EEEE
T ss_pred ecCC-CCceEEEEECCCCcccceeccCcccccccccccccCCcEEE---EEECC--------CCCEEEEEeCCC--eEEE
Confidence 5321 127899999998876544432 111111 11222 234666666677 8999
Q ss_pred EeCCCcee-eccc------cC---------------CeEEEEEEeecCCCc---------EEEEEEccCCCceeeEEEEE
Q 004067 398 HDINGTCL-GPIT------EG---------------DWMVEQIVGVNEASG---------QVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 398 ~~~~g~~~-~~lt------~~---------------~~~~~~~~~~s~dg~---------~i~~~~~~~~~~~~~l~~~~ 446 (776)
|++..++. ..+. .+ ...+..+. |+++|+ .+++++..++ .+.+|.++
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~-~~~~g~~~~~~~~~~~~l~s~~~dg--~i~iw~~~ 394 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVK-FLKKGWRSGMGADLNESLCCVCLDR--SIRWFREA 394 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEE-EECTTTSBSTTCTTSCEEEEEETTT--EEEEEEEE
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEE-eccccccccccccccceEEEecCCC--cEEEEEcC
Confidence 99876654 4444 33 45566654 999983 3455555554 37888887
No 283
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.41 E-value=3.8e-17 Score=167.75 Aligned_cols=216 Identities=12% Similarity=0.029 Sum_probs=130.7
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhh
Q 004067 533 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 612 (776)
Q Consensus 533 dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~ 612 (776)
+|..+++.... +.|+||++||.+++.. .|..++..|+ .||.|+++|+||+|.+.......
T Consensus 13 ~g~~~~~~~~g---------~~p~vv~lHG~~~~~~-------~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~--- 72 (304)
T 3b12_A 13 GDVTINCVVGG---------SGPALLLLHGFPQNLH-------MWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAP--- 72 (304)
Confidence 67667665432 2378999999876543 2334566777 79999999999999886531100
Q ss_pred ccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc-------------
Q 004067 613 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------- 679 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~------------- 679 (776)
........++.+.+..+++.. +.+++.++||||||.+++.+|.++|++++++|+.+|........
T Consensus 73 ~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 150 (304)
T 3b12_A 73 DHANYSFRAMASDQRELMRTL--GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHW 150 (304)
Confidence 011122333444433333332 34589999999999999999999999999999988754321000
Q ss_pred ------------------cccccc-cc----CC----CCCCccc-----------------hhcC---C----hhhhhcc
Q 004067 680 ------------------TFYTEK-YM----GL----PSEDPVG-----------------YEYS---S----VMHHVHK 708 (776)
Q Consensus 680 ------------------~~~~~~-~~----~~----~~~~~~~-----------------~~~~---~----~~~~~~~ 708 (776)
..+... ++ .. +...... +... + ....+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
T 3b12_A 151 YFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQ 230 (304)
Confidence 000000 00 00 0000000 0000 0 0001567
Q ss_pred CCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 709 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 709 i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
+++|+|+++|++|..+++....+..+.+ ..+++++++ ++||.+ ..+.++++.+.+.+||++.
T Consensus 231 i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i-~~gH~~-~~e~p~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 231 VQCPALVFSGSAGLMHSLFEMQVVWAPR---LANMRFASL-PGGHFF-VDRFPDDTARILREFLSDA 292 (304)
Confidence 8899999999999655433333333333 234677788 999986 5567888999999999764
No 284
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.61 E-value=1.2e-15 Score=155.76 Aligned_cols=218 Identities=11% Similarity=0.080 Sum_probs=136.7
Q ss_pred CCceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCC--CCcccccccccccchhhhHHHHhCCcEEEEECCCCC
Q 004067 522 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGG--PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 599 (776)
Q Consensus 522 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~--~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~ 599 (776)
...+...+.+.++ .+.++ +.+ ..|+||++||. .++.. .|..++..|+ .||.|+++|+||+
T Consensus 19 ~~~~~~~v~~~~~-~~~~~-~~~--------~~p~vv~lHG~G~~~~~~-------~~~~~~~~L~-~~~~vi~~D~~G~ 80 (292)
T 3l80_A 19 AALNKEMVNTLLG-PIYTC-HRE--------GNPCFVFLSGAGFFSTAD-------NFANIIDKLP-DSIGILTIDAPNS 80 (292)
T ss_dssp -CCEEEEECCTTS-CEEEE-EEC--------CSSEEEEECCSSSCCHHH-------HTHHHHTTSC-TTSEEEEECCTTS
T ss_pred hccCcceEEecCc-eEEEe-cCC--------CCCEEEEEcCCCCCcHHH-------HHHHHHHHHh-hcCeEEEEcCCCC
Confidence 3455666666544 46555 221 22899999963 22222 3344455565 6999999999999
Q ss_pred CCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccc--
Q 004067 600 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-- 677 (776)
Q Consensus 600 g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~-- 677 (776)
|.+.... .....++++.+.+..+++.. ..+++.|+||||||.+++.++.++|++++++|+.+|......
T Consensus 81 G~S~~~~-------~~~~~~~~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 151 (292)
T 3l80_A 81 GYSPVSN-------QANVGLRDWVNAILMIFEHF--KFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRA 151 (292)
T ss_dssp TTSCCCC-------CTTCCHHHHHHHHHHHHHHS--CCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHH
T ss_pred CCCCCCC-------cccccHHHHHHHHHHHHHHh--CCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhh
Confidence 9886211 11234677777777776654 335899999999999999999999999999999884321000
Q ss_pred ----------------ccc----------c----cccc---------------ccCCCC-CCccchhcC---Chhhhhcc
Q 004067 678 ----------------YDT----------F----YTEK---------------YMGLPS-EDPVGYEYS---SVMHHVHK 708 (776)
Q Consensus 678 ----------------~~~----------~----~~~~---------------~~~~~~-~~~~~~~~~---~~~~~~~~ 708 (776)
... . +... +..... .....+... +....+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 231 (292)
T 3l80_A 152 GFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE 231 (292)
T ss_dssp CTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT
T ss_pred ccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC
Confidence 000 0 0000 000000 000001100 11123445
Q ss_pred CCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 709 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 709 i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
++|+|+++|++|..+++. + .+.+. -...+ +++++++|.+ ..+.++++.+.+.+||+++
T Consensus 232 -~~P~lii~g~~D~~~~~~-~-~~~~~----~~~~~-~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 232 -KIPSIVFSESFREKEYLE-S-EYLNK----HTQTK-LILCGQHHYL-HWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp -TSCEEEEECGGGHHHHHT-S-TTCCC----CTTCE-EEECCSSSCH-HHHCHHHHHHHHHHHHHTC
T ss_pred -CCCEEEEEccCccccchH-H-HHhcc----CCCce-eeeCCCCCcc-hhhCHHHHHHHHHHHHHhc
Confidence 789999999999988877 4 44432 34556 8999999976 4567889999999999875
No 285
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.61 E-value=2.7e-13 Score=141.60 Aligned_cols=245 Identities=9% Similarity=0.063 Sum_probs=144.9
Q ss_pred CeeeEEEeecCCCceEEEEeCC--CcEEEEeCC--CCccceecCC--CCCCCccCceeCCCCCEEEEEEC--CcEEEEec
Q 004067 126 GVTRYEWVKTSSKKKIIMVPLP--DGIYFQDLS--CSKPELKLSS--SSCSPVIDPHLSSDGTMIAFVRD--CELHVLNL 197 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~~~--~~l~~~d~~--~~~~~~~l~~--~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l 197 (776)
.+..+.|+| ||++|++... +.|.+|+++ +++.+ .+.. ... ....++|||||+.|++... +.|+++++
T Consensus 39 ~~~~~~~sp---dg~~l~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 39 QVQPMVVSP---DKRYLYVGVRPEFRVLAYRIAPDDGALT-FAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp CCCCEEECT---TSSEEEEEETTTTEEEEEEECTTTCCEE-EEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCceEEECC---CCCEEEEeecCCCeEEEEEecCCCCcee-eccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 566789999 9999988743 789998887 66644 2211 122 3677899999999888874 45999998
Q ss_pred CCCce---eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 198 LINEQ---RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 198 ~~g~~---~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
.+|.. .+...... ....++|+|||+.|+......
T Consensus 114 ~~~~~~~~~~~~~~~~------------------~~~~~~~s~dg~~l~~~~~~~------------------------- 150 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLD------------------GCHSANISPDNRTLWVPALKQ------------------------- 150 (343)
T ss_dssp ETTEEEEEEEEECCCT------------------TBCCCEECTTSSEEEEEEGGG-------------------------
T ss_pred CCCccccccccccCCC------------------CceEEEECCCCCEEEEecCCC-------------------------
Confidence 54432 22221111 134678999999887654221
Q ss_pred CCCCCCCCCeEEEEEEEcCC-CceEEEE--cccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEEC--CCC
Q 004067 275 YPFAGASNVKVRLGVVSAAG-GPVSWMD--LQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI--KTG 349 (776)
Q Consensus 275 ~~~~g~~~~~~~l~~~d~~~-~~~~~l~--~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~--~~g 349 (776)
..|++||+.+ ++...+. ... .........+.|+|||+.+++... ....|.+|++ .++
T Consensus 151 ----------~~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pdg~~l~~~~~---~~~~i~~~~~~~~~g 212 (343)
T 1ri6_A 151 ----------DRICLFTVSDDGHLVAQDPAEVT-----TVEGAGPRHMVFHPNEQYAYCVNE---LNSSVDVWELKDPHG 212 (343)
T ss_dssp ----------TEEEEEEECTTSCEEEEEEEEEE-----CSTTCCEEEEEECTTSSEEEEEET---TTTEEEEEESSCTTS
T ss_pred ----------CEEEEEEecCCCceeeecccccc-----cCCCCCcceEEECCCCCEEEEEeC---CCCEEEEEEecCCCC
Confidence 3478899887 6655332 100 122235667999999997766642 2345888888 456
Q ss_pred ceEEEEEecc--CceeecccccccCCCCccccC-CeEEEEe-ccCCceEEEEEeCC--Cceeecc---ccCCeEEEEEEe
Q 004067 350 QRKVILVEEL--DSWVNLHDCFTPLDKGVTKYS-GGFIWAS-EKTGFRHLYLHDIN--GTCLGPI---TEGDWMVEQIVG 420 (776)
Q Consensus 350 ~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~s-~~~g~~~l~~~~~~--g~~~~~l---t~~~~~~~~~~~ 420 (776)
+.+.+..... ..+... . ....+.+++ ++.++++ ..++ .|++|+++ ++..+.+ ..+.. +..+ .
T Consensus 213 ~~~~~~~~~~~~~~~~~~---~--~~~~i~~s~dg~~l~v~~~~~~--~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~-~ 283 (343)
T 1ri6_A 213 NIECVQTLDMMPENFSDT---R--WAADIHITPDGRHLYACDRTAS--LITVFSVSEDGSVLSKEGFQPTETQ-PRGF-N 283 (343)
T ss_dssp CCEEEEEEECSCTTCCSC---C--CEEEEEECTTSSEEEEEETTTT--EEEEEEECTTSCCEEEEEEEECSSS-CCCE-E
T ss_pred cEEEEeeccccCcccccc---C--CccceEECCCCCEEEEEecCCC--EEEEEEEcCCCCceEEeeeecCCCc-cceE-E
Confidence 6544332210 010000 0 000112333 2344444 3455 78888876 4433332 22222 3344 4
Q ss_pred ecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 421 VNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 421 ~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
|++||+.||+....++ .+.+|.++.
T Consensus 284 ~s~dg~~l~~~~~~~~--~v~v~~~d~ 308 (343)
T 1ri6_A 284 VDHSGKYLIAAGQKSH--HISVYEIVG 308 (343)
T ss_dssp ECTTSSEEEEECTTTC--EEEEEEEET
T ss_pred ECCCCCEEEEecCCCC--eEEEEEEcC
Confidence 9999998888775544 388999986
No 286
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1.7e-12 Score=153.00 Aligned_cols=158 Identities=11% Similarity=0.042 Sum_probs=100.0
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.+..++||| |++|+-.+.+ ..|.+||+.+++......+ ...+..+.|+|
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D-----~~v~lWd~~~~~~~~~~~~------------------------~~~V~~v~~sp- 108 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAK-----DTVYVLSLYSQKVLTTVFV------------------------PGKITSIDTDA- 108 (902)
T ss_dssp CEEEEEEET-TTEEEEEETT-----CEEEEEETTTCSEEEEEEC------------------------SSCEEEEECCT-
T ss_pred CEEEEEEcC-CCEEEEEECc-----CeEEEEECCCCcEEEEEcC------------------------CCCEEEEEECC-
Confidence 358899999 8888765542 4799999998876433322 13688999999
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCccce-----------ecCCCCCCCccCceeCCCCC-EEEEEEC-CcEEEEecCCCc
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSKPEL-----------KLSSSSCSPVIDPHLSSDGT-MIAFVRD-CELHVLNLLINE 201 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~~~~-----------~l~~~~~~~~~~~~~SpDg~-~la~~~~-~~l~~~~l~~g~ 201 (776)
||++|+.. .++.|.+||+.+++... .+... ...+..++|+|++. .|+.... +.+ +||+.+++
T Consensus 109 --~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h-~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~ 184 (902)
T 2oaj_A 109 --SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR-LSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE 184 (902)
T ss_dssp --TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSC-CCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE
T ss_pred --CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccC-CCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc
Confidence 99999986 78899999999887530 11222 23478899999764 4444333 458 99999987
Q ss_pred eeEEeeCCCCCceecCCcc-cceecccCCcceEEECCCCCeEEEEEec
Q 004067 202 QRQLTHGANGNTVTHGLAE-YIAQEEMDRKTGYWWSLDSKFIAFTQVD 248 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~-~~~~~~~~~~~~~~wspDg~~l~~~~~~ 248 (776)
..+............+... -........+..++|+|||+.|+....|
T Consensus 185 ~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D 232 (902)
T 2oaj_A 185 IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED 232 (902)
T ss_dssp EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC
Confidence 6543221100000000000 0000111235689999999999877644
No 287
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.60 E-value=3.9e-14 Score=152.56 Aligned_cols=251 Identities=11% Similarity=0.100 Sum_probs=157.0
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCC----C-ceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeE
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKT----C-KQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRY 130 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~----~-~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (776)
.+..++|||||++|+..+.. ..|.+|++.+ . ....+..+ ...+...
T Consensus 69 ~v~~~~~s~~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~~~~~h------------------------~~~v~~~ 119 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDN-----GSLELYSTNEANNAINSMARFSNH------------------------SSSVKTV 119 (416)
T ss_dssp CEEEEEECSSSSCEEEEESS-----SCEEEECCSSTTSCCCEEEECCCS------------------------SSCCCEE
T ss_pred ceEEEEECCCCCeEEEEccC-----CeEEEeecccccccccchhhccCC------------------------ccceEEE
Confidence 35789999999999876552 3699999987 2 22333322 2368899
Q ss_pred EEeecCCC-ceEEEEe-CCCcEEEEeCCCCc------cceec--CCCCCCCccCceeCCC-CCEEEEEE-CCcEEEEecC
Q 004067 131 EWVKTSSK-KKIIMVP-LPDGIYFQDLSCSK------PELKL--SSSSCSPVIDPHLSSD-GTMIAFVR-DCELHVLNLL 198 (776)
Q Consensus 131 ~~sp~~~d-g~~l~~~-~~~~l~~~d~~~~~------~~~~l--~~~~~~~~~~~~~SpD-g~~la~~~-~~~l~~~~l~ 198 (776)
.|+| | ++.|+.. .++.|++||+.+++ ....+ .......+..+.|+|| +..|+... ++.|.+|++.
T Consensus 120 ~~~~---~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 120 KFNA---KQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp EECS---SSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred EEcC---CCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 9999 9 7777765 67899999999886 22122 1122234788999999 45555543 3579999999
Q ss_pred CCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCC
Q 004067 199 INEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 278 (776)
Q Consensus 199 ~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (776)
+++.......... ..+. ...+..+.|+|||+.+++.....+.
T Consensus 197 ~~~~~~~~~~~~~---~~~~--------~~~v~~~~~~~~~~~~l~~~~~d~~--------------------------- 238 (416)
T 2pm9_A 197 AKKEVIHLSYTSP---NSGI--------KQQLSVVEWHPKNSTRVATATGSDN--------------------------- 238 (416)
T ss_dssp TTEEEEEECCCCC---SSCC--------CCCEEEEEECSSCTTEEEEEECCSS---------------------------
T ss_pred CCCcceEEecccc---cccc--------CCceEEEEECCCCCCEEEEEECCCC---------------------------
Confidence 8876544332210 0000 0114578999998644444322210
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEcccCCCCCC-CCcceEEEEEecc-CCeEEEEEEeecCceEEEEEEECCCCceEEEEE
Q 004067 279 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN-YDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 356 (776)
Q Consensus 279 g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 356 (776)
...|++||+.+++..... +. .+...+..++|+| |+++|+... .+..|.+||+.+++......
T Consensus 239 -----~~~i~~~d~~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~~~l~s~~----~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 239 -----DPSILIWDLRNANTPLQT-------LNQGHQKGILSLDWCHQDEHLLLSSG----RDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp -----SCCCCEEETTSTTSCSBC-------CCSCCSSCEEEEEECSSCSSCEEEEE----SSSEEEEECSSSCCEEEEEE
T ss_pred -----CceEEEEeCCCCCCCcEE-------eecCccCceeEEEeCCCCCCeEEEEe----CCCCEEEeeCCCCccceeec
Confidence 014688998876321111 13 4667899999999 888777665 35569999999887654433
Q ss_pred e-ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce
Q 004067 357 E-ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC 404 (776)
Q Consensus 357 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~ 404 (776)
. ....+. -.|+| ++..++++...+| .|.+|++....
T Consensus 303 ~~~~~v~~---~~~s~-------~~~~~l~s~~~d~--~i~iw~~~~~~ 339 (416)
T 2pm9_A 303 ARGNWCFK---TKFAP-------EAPDLFACASFDN--KIEVQTLQNLT 339 (416)
T ss_dssp CSSSCCCC---EEECT-------TCTTEEEECCSSS--EEEEEESCCCC
T ss_pred CCCCceEE---EEECC-------CCCCEEEEEecCC--cEEEEEccCCC
Confidence 2 222111 11222 1224677776777 88889887654
No 288
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.60 E-value=9.3e-13 Score=138.82 Aligned_cols=264 Identities=14% Similarity=0.095 Sum_probs=149.9
Q ss_pred CCCceeEcCCCCEEEEEeCCC-CcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 56 APTSIGFSPDDNLITYLLSPD-HSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
.+..++|||||++|++.+... +.+.-.+|.++.++|+.+.+..... .+.....++.
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~-----------------------~~~~p~~~~~ 107 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT-----------------------MGADPCYLTT 107 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC-----------------------SSSCEEEEEE
T ss_pred CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc-----------------------CCCCcEEEEE
Confidence 457889999999998887742 1112344556666677766654211 1222334555
Q ss_pred cCCCceEEEEe--CCCcEEEEeCCCCccceecC-----CCCC--------CCccCceeCCCCCEEEEEEC--CcEEEEec
Q 004067 135 TSSKKKIIMVP--LPDGIYFQDLSCSKPELKLS-----SSSC--------SPVIDPHLSSDGTMIAFVRD--CELHVLNL 197 (776)
Q Consensus 135 ~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~-----~~~~--------~~~~~~~~SpDg~~la~~~~--~~l~~~~l 197 (776)
||++|++. .++.|.+|++........+. .+.. .....+.|||||+.|++... +.++++++
T Consensus 108 ---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 184 (361)
T 3scy_A 108 ---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNI 184 (361)
T ss_dssp ---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 88988887 46679999987533220211 1100 01245899999999888764 45777776
Q ss_pred CCCc-------ee------EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCC
Q 004067 198 LINE-------QR------QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSS 264 (776)
Q Consensus 198 ~~g~-------~~------~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 264 (776)
+... .. .+...... ....++|||||+.|++.....
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~spdg~~l~v~~~~~--------------- 232 (361)
T 3scy_A 185 NPNANADNKEKFLTKGTPEAFKVAPGS-----------------GPRHLIFNSDGKFAYLINEIG--------------- 232 (361)
T ss_dssp CTTCCTTTCCCCEEEEEEEEEECCTTC-----------------CEEEEEECTTSSEEEEEETTT---------------
T ss_pred cCCCCcccccceeecccccceecCCCC-----------------CCeEEEEcCCCCEEEEEcCCC---------------
Confidence 6433 11 11111110 134688999999887655211
Q ss_pred CCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeec-CceEEEEE
Q 004067 265 VGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS-QTKLKVLK 343 (776)
Q Consensus 265 ~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~l~~ 343 (776)
..|.+|++++++...+..... ..........++|||||++|+.. ++. .+.-.||.
T Consensus 233 --------------------~~v~v~~~~~g~~~~~~~~~~---~~~~~~~~~~i~~spdg~~l~v~-~~~~~~~i~v~~ 288 (361)
T 3scy_A 233 --------------------GTVIAFRYADGMLDEIQTVAA---DTVNAQGSGDIHLSPDGKYLYAS-NRLKADGVAIFK 288 (361)
T ss_dssp --------------------CEEEEEEEETTEEEEEEEEES---CSSCCCCEEEEEECTTSSEEEEE-ECSSSCEEEEEE
T ss_pred --------------------CeEEEEEecCCceEEeEEEec---CCCCCCCcccEEECCCCCEEEEE-CCCCCCEEEEEE
Confidence 347888888877654432111 12222345789999999977654 333 34444555
Q ss_pred EECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccc
Q 004067 344 FDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT 409 (776)
Q Consensus 344 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt 409 (776)
++.++|..+.+.......+ ...-.|+| +++.+++....++.-.+|.+|+++++.+.+.
T Consensus 289 ~~~~~g~~~~~~~~~~g~~-~~~~~~sp-------dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 289 VDETNGTLTKVGYQLTGIH-PRNFIITP-------NGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp ECTTTCCEEEEEEEECSSC-CCEEEECT-------TSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EcCCCCcEEEeeEecCCCC-CceEEECC-------CCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 5556787766644332111 00111222 2223444444567667777888888766654
No 289
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.60 E-value=2.5e-13 Score=144.49 Aligned_cols=279 Identities=9% Similarity=0.016 Sum_probs=174.8
Q ss_pred CCeeeEEEeecCCCc-eEEEEe-CCCcEEEEeCCCCccceecCC-CCCCCccCceeCC-CCCEEEEEEC-CcEEEEecCC
Q 004067 125 LGVTRYEWVKTSSKK-KIIMVP-LPDGIYFQDLSCSKPELKLSS-SSCSPVIDPHLSS-DGTMIAFVRD-CELHVLNLLI 199 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg-~~l~~~-~~~~l~~~d~~~~~~~~~l~~-~~~~~~~~~~~Sp-Dg~~la~~~~-~~l~~~~l~~ 199 (776)
..+..+.|+| || +.|+.. .++.|.+||+.+++....+.. .....+..+.|+| |++.|+..+. +.|.+|++.+
T Consensus 74 ~~v~~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 74 RRVTSLEWHP---THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp SCEEEEEECS---SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS
T ss_pred CCEEEEEECC---CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC
Confidence 4688999999 99 777766 678999999998877633331 2333588899999 6677776664 5799999997
Q ss_pred CceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCC
Q 004067 200 NEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAG 279 (776)
Q Consensus 200 g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (776)
+..+.+...... . ..+..+.|+||++.|+....+
T Consensus 151 ~~~~~~~~~~~~-------~--------~~v~~~~~~~~~~~l~~~~~d------------------------------- 184 (383)
T 3ei3_B 151 SVIQVFAKTDSW-------D--------YWYCCVDVSVSRQMLATGDST------------------------------- 184 (383)
T ss_dssp CEEEEEECCCCS-------S--------CCEEEEEEETTTTEEEEEETT-------------------------------
T ss_pred CceEEEeccCCC-------C--------CCeEEEEECCCCCEEEEECCC-------------------------------
Confidence 666655433211 0 114578899999988876533
Q ss_pred CCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCC----CceEEE
Q 004067 280 ASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKT----GQRKVI 354 (776)
Q Consensus 280 ~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~----g~~~~l 354 (776)
..|++||+.+.....+ ..+...+..++|+|+++ .++..+ .+..|.+||+.+ +.....
T Consensus 185 -----~~i~i~d~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~l~s~~----~d~~i~iwd~~~~~~~~~~~~~ 246 (383)
T 3ei3_B 185 -----GRLLLLGLDGHEIFKE---------KLHKAKVTHAEFNPRCDWLMATSS----VDATVKLWDLRNIKDKNSYIAE 246 (383)
T ss_dssp -----SEEEEEETTSCEEEEE---------ECSSSCEEEEEECSSCTTEEEEEE----TTSEEEEEEGGGCCSTTCEEEE
T ss_pred -----CCEEEEECCCCEEEEe---------ccCCCcEEEEEECCCCCCEEEEEe----CCCEEEEEeCCCCCcccceEEE
Confidence 3589999976655555 44667899999999998 666554 355799999987 444444
Q ss_pred EEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCC-------eEEEEEEeecCCCc
Q 004067 355 LVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGD-------WMVEQIVGVNEASG 426 (776)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~-------~~~~~~~~~s~dg~ 426 (776)
..+....... .|+| .++.++++...+| .|++||+..++. ..+..+. ..+. ..|+|++.
T Consensus 247 ~~~~~~v~~~---~~s~-------~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~ 312 (383)
T 3ei3_B 247 MPHEKPVNAA---YFNP-------TDSTKLLTTDQRN--EIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK--ATWHPMYD 312 (383)
T ss_dssp EECSSCEEEE---EECT-------TTSCEEEEEESSS--EEEEEETTBTTSCSEEEECCBCCCTTSCCCC--CEECSSSS
T ss_pred ecCCCceEEE---EEcC-------CCCCEEEEEcCCC--cEEEEECCCCccccccccccccccccccceE--EeccCCCC
Confidence 4443332211 1222 0233555666666 899999876542 2232111 0111 12444444
Q ss_pred EEEE--------EEccCCCceeeEEEEEeCCCCCCccccceeecCC--CC-eEEEEEcCCcCEEEEEeeCCCCCCEEEEE
Q 004067 427 QVYF--------TGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG--KG-KHVAVLDHNMRNFVDFHDSLDSPPRILLC 495 (776)
Q Consensus 427 ~i~~--------~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~--~~-~~~~~~spdg~~l~~~~~~~~~~~~i~~~ 495 (776)
.+.+ ++..++ .+.+|.+. .+. .+..+... .+ +..+.|+|||+.|+.. + + ..|.+|
T Consensus 313 ~~~~~~s~dg~~s~s~d~--~i~iwd~~---~~~----~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s--d--~~i~iw 378 (383)
T 3ei3_B 313 LIVAGRYPDDQLLLNDKR--TIDIYDAN---SGG----LVHQLRDPNAAGIISLNKFSPTGDVLASG-M--G--FNILIW 378 (383)
T ss_dssp EEEEECBCCTTTCTTCCC--CEEEEETT---TCC----EEEEECBTTBCSCCCEEEECTTSSEEEEE-E--T--TEEEEE
T ss_pred ceEEEecCCcccccCCCC--eEEEEecC---CCc----eeeeecCCCCCceEEEEEEecCccEEEEe-c--C--CcEEEE
Confidence 3332 222333 36666554 343 45566542 23 3455999999988777 3 2 479988
Q ss_pred EcC
Q 004067 496 SLQ 498 (776)
Q Consensus 496 ~~~ 498 (776)
++.
T Consensus 379 ~~~ 381 (383)
T 3ei3_B 379 NRE 381 (383)
T ss_dssp ECC
T ss_pred ecC
Confidence 874
No 290
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.59 E-value=7.7e-13 Score=142.65 Aligned_cols=283 Identities=8% Similarity=0.031 Sum_probs=181.0
Q ss_pred eeeEEEeecCCCceEEEEeCCCcEEEEeCCCCccceecCC-CCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeE
Q 004067 127 VTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSS-SSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQ 204 (776)
Q Consensus 127 ~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~ 204 (776)
..-+.||+ ++ .|++..++.|++||+.+|+....+.. .....+..++|||||+.||..+. +.|.+|++.+++...
T Consensus 108 ~~~l~wS~---~n-~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 108 LNLVDWSS---GN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp CBCEEECT---TS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ceeEEECC---CC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 34578998 64 78899999999999999987633332 22234788999999999998775 579999999987654
Q ss_pred EeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCe
Q 004067 205 LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVK 284 (776)
Q Consensus 205 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 284 (776)
....... .-..+++|++.|+....+
T Consensus 184 ~~~~h~~-------------------~v~~~s~~~~~l~sgs~d------------------------------------ 208 (420)
T 4gga_A 184 NMTSHSA-------------------RVGSLSWNSYILSSGSRS------------------------------------ 208 (420)
T ss_dssp EECCCSS-------------------CEEEEEEETTEEEEEETT------------------------------------
T ss_pred EEeCCCC-------------------ceEEEeeCCCEEEEEeCC------------------------------------
Confidence 4332211 122345577777655432
Q ss_pred EEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE-----EEEEecc
Q 004067 285 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK-----VILVEEL 359 (776)
Q Consensus 285 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~-----~l~~~~~ 359 (776)
..+.+||..........+ ..+...+..+.|+|+|+.++... .+..+.+|+..+++.. ....+..
T Consensus 209 ~~i~~~d~~~~~~~~~~~-------~~h~~~~~~~~~~~~g~~l~s~~----~D~~v~i~~~~~~~~~~~~~~~~~~~~~ 277 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATL-------SGHSQEVCGLRWAPDGRHLASGG----NDNLVNVWPSAPGEGGWVPLQTFTQHQG 277 (420)
T ss_dssp SEEEEEETTSSSCEEEEE-------ECCSSCEEEEEECTTSSEEEEEE----TTSCEEEEESSCCSSCSCCSEEECCCSS
T ss_pred CceeEeeecccceeeEEe-------cccccceeeeeecCCCCeeeeee----ccccceEEeeccccccceeeeeecccCC
Confidence 346788877655443332 35666788899999999887765 3456889998876531 2222221
Q ss_pred CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCce
Q 004067 360 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 439 (776)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~ 439 (776)
.... -.|.| .+..++++........|.+||+.+++..........+.... |+++++.++..+.... ..
T Consensus 278 ~V~~---~~~~p-------~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~-~~~~~~~lv~~sg~~d-~~ 345 (420)
T 4gga_A 278 AVKA---VAWCP-------WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSIL-WSPHYKELISGHGFAQ-NQ 345 (420)
T ss_dssp CEEE---EEECT-------TCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEE-EETTTTEEEEEECTTT-CC
T ss_pred ceee---eeeCC-------CcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeee-ecCCCCeEEEEEecCC-CE
Confidence 1111 11222 23345554433223389999998877554444444555554 8999998887765322 23
Q ss_pred eeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCce
Q 004067 440 SHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 502 (776)
Q Consensus 440 ~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~ 502 (776)
+.||.+. .+. .+..|..+. .+..++|||||++|+... .+ ..|.+|++.+...
T Consensus 346 I~iwd~~---~~~----~v~~l~gH~~~V~~l~~spdg~~l~S~s-~D---~tvriWdv~~~~~ 398 (420)
T 4gga_A 346 LVIWKYP---TMA----KVAELKGHTSRVLSLTMSPDGATVASAA-AD---ETLRLWRCFELDP 398 (420)
T ss_dssp EEEEETT---TCC----EEEEECCCSSCEEEEEECTTSSCEEEEE-TT---TEEEEECCSCSSC
T ss_pred EEEEECC---CCc----EEEEEcCCCCCEEEEEEcCCCCEEEEEe-cC---CeEEEEECCCCCc
Confidence 6676654 343 566677655 477889999999887654 33 3588888765443
No 291
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.59 E-value=2.6e-14 Score=145.59 Aligned_cols=223 Identities=11% Similarity=0.053 Sum_probs=133.4
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 603 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~ 603 (776)
.+...+.. +|..+++.... ..|.||++||.+++.. .|......|+ .+|.|+++|+||+|.|.
T Consensus 5 ~~~~~~~~-~~~~~~~~~~g---------~g~~~vllHG~~~~~~-------~w~~~~~~l~-~~~~vi~~Dl~G~G~s~ 66 (291)
T 3qyj_A 5 FEQTIVDT-TEARINLVKAG---------HGAPLLLLHGYPQTHV-------MWHKIAPLLA-NNFTVVATDLRGYGDSS 66 (291)
T ss_dssp CEEEEEEC-SSCEEEEEEEC---------CSSEEEEECCTTCCGG-------GGTTTHHHHT-TTSEEEEECCTTSTTSC
T ss_pred cceeEEec-CCeEEEEEEcC---------CCCeEEEECCCCCCHH-------HHHHHHHHHh-CCCEEEEEcCCCCCCCC
Confidence 34445554 78888887543 1257899999877644 2334456664 58999999999999886
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCccccc----
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD---- 679 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~---- 679 (776)
....... ...+..+++...+..+.+.. ..+++.++||||||.+++.++.++|++++++++.++......+.
T Consensus 67 ~~~~~~~---~~~~~~~~~~~~~~~~~~~l--~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~ 141 (291)
T 3qyj_A 67 RPASVPH---HINYSKRVMAQDQVEVMSKL--GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQ 141 (291)
T ss_dssp CCCCCGG---GGGGSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCH
T ss_pred CCCCCcc---ccccCHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchh
Confidence 4321110 01123444444444444332 33589999999999999999999999999999876532110000
Q ss_pred ----c-----------------------ccccccc---CCC--CCCcc--------------------chhcCC------
Q 004067 680 ----T-----------------------FYTEKYM---GLP--SEDPV--------------------GYEYSS------ 701 (776)
Q Consensus 680 ----~-----------------------~~~~~~~---~~~--~~~~~--------------------~~~~~~------ 701 (776)
. .+....+ ... ....+ .|....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (291)
T 3qyj_A 142 EFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEH 221 (291)
T ss_dssp HHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHH
T ss_pred hhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhh
Confidence 0 0000000 000 00000 000000
Q ss_pred -hhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 702 -VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 702 -~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
......++++|+|+++|++|...+... ..+.+.+...++...+++ +||.+ ..+.++++.+.+.+||.+
T Consensus 222 ~~~~~~~~i~~P~Lvi~G~~D~~~~~~~---~~~~~~~~~~~~~~~~~~-~GH~~-~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 222 DELDMKQKISCPVLVLWGEKGIIGRKYD---VLATWRERAIDVSGQSLP-CGHFL-PEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp HHTTTTCCBCSCEEEEEETTSSHHHHSC---HHHHHHTTBSSEEEEEES-SSSCH-HHHSHHHHHHHHHHHHHC
T ss_pred cchhcCCccccceEEEecccccccchhh---HHHHHHhhcCCcceeecc-CCCCc-hhhCHHHHHHHHHHHHhc
Confidence 011245788999999999996543211 112222333567777886 89966 778899999999999974
No 292
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.59 E-value=7.1e-14 Score=147.68 Aligned_cols=222 Identities=10% Similarity=-0.014 Sum_probs=145.2
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhC---------CcEEEEEC
Q 004067 525 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK---------GILVWKLD 595 (776)
Q Consensus 525 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~---------G~~v~~~d 595 (776)
..+.... +|..+++..+.+.. +..|.||++||.+++.. .|..++..|++. ||.|+++|
T Consensus 69 ~~~~~~i-~g~~i~~~~~~~~~-----~~~~plll~HG~~~s~~-------~~~~~~~~L~~~~~~~~~~~~~~~vi~~d 135 (388)
T 4i19_A 69 PQFTTEI-DGATIHFLHVRSPE-----PDATPMVITHGWPGTPV-------EFLDIIGPLTDPRAHGGDPADAFHLVIPS 135 (388)
T ss_dssp CEEEEEE-TTEEEEEEEECCSS-----TTCEEEEEECCTTCCGG-------GGHHHHHHHHCGGGGTSCGGGCEEEEEEC
T ss_pred CcEEEEE-CCeEEEEEEccCCC-----CCCCeEEEECCCCCCHH-------HHHHHHHHHhCcccccCCCCCCeEEEEEc
Confidence 3344443 89999998887654 24578999999887754 344557777775 99999999
Q ss_pred CCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCc
Q 004067 596 NRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 675 (776)
Q Consensus 596 ~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~ 675 (776)
+||+|.|..... ......++...+..+.++. ..++++++||||||.+++.+|.++|+.++++++.+|....
T Consensus 136 l~G~G~S~~~~~-------~~~~~~~~a~~~~~l~~~l--g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 206 (388)
T 4i19_A 136 LPGFGLSGPLKS-------AGWELGRIAMAWSKLMASL--GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTNL 206 (388)
T ss_dssp CTTSGGGCCCSS-------CCCCHHHHHHHHHHHHHHT--TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCCB
T ss_pred CCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHc--CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCCC
Confidence 999998864321 1234667777777666653 3458999999999999999999999999999998864321
Q ss_pred cc-------c-----------cccc--------------------------------ccccc--CCCCC------Cc---
Q 004067 676 DG-------Y-----------DTFY--------------------------------TEKYM--GLPSE------DP--- 694 (776)
Q Consensus 676 ~~-------~-----------~~~~--------------------------------~~~~~--~~~~~------~~--- 694 (776)
.. + ..++ .+++. ..+.. ..
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d~l 286 (388)
T 4i19_A 207 SGEPGELETLSDADKARLAVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRDLM 286 (388)
T ss_dssp CCCGGGGGGCCHHHHHHHHTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHHHH
T ss_pred CCcccccccCCHHHHHHHHHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHHHH
Confidence 10 0 0000 00000 00000 00
Q ss_pred -----------------cchhcCC-------hhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecC
Q 004067 695 -----------------VGYEYSS-------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 750 (776)
Q Consensus 695 -----------------~~~~~~~-------~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 750 (776)
..|.+.. ......++++|+++++|.+|...++... .+.+ ....+++.++++
T Consensus 287 l~~~~~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p~~~---~~~~--~~~~~~~~~~~~ 361 (388)
T 4i19_A 287 LTHISLFWFTATGGSAAQAHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQPVRSL---AERD--FKQIVHWAELDR 361 (388)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCCHHH---HHHH--BTTEEEEEECSS
T ss_pred HHHHHHHHhcCCchhHHHHHHHhhcccccccccccCCCCCCCEEEEeCCcccccccHHH---HHHh--CCCeEEEEECCC
Confidence 0000000 0003345789999999999966555422 2222 112367888999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHH
Q 004067 751 ERHMPRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 751 ~~H~~~~~~~~~~~~~~~~~fl~~ 774 (776)
+||.. ..+.++.+.+.+.+||++
T Consensus 362 gGHf~-~~E~Pe~~~~~l~~fl~~ 384 (388)
T 4i19_A 362 GGHFS-AMEEPDLFVDDLRTFNRT 384 (388)
T ss_dssp CBSSH-HHHCHHHHHHHHHHHHHH
T ss_pred CcCcc-chhcHHHHHHHHHHHHHH
Confidence 99976 678899999999999975
No 293
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.59 E-value=4.7e-13 Score=140.26 Aligned_cols=280 Identities=13% Similarity=0.046 Sum_probs=153.1
Q ss_pred EEEEeCCCCccceecCC-CCCCCccCceeCCCCCEEEEEEC----CcEEEEecCCCceeEEeeCCCCCceecCCccccee
Q 004067 150 IYFQDLSCSKPELKLSS-SSCSPVIDPHLSSDGTMIAFVRD----CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQ 224 (776)
Q Consensus 150 l~~~d~~~~~~~~~l~~-~~~~~~~~~~~SpDg~~la~~~~----~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~ 224 (776)
+|.+|.++++.+ .+.. ........++|||||+ |+++.. +.|+++++++|+.+++......
T Consensus 20 v~~~d~~tg~~~-~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~------------- 84 (347)
T 3hfq_A 20 QGTLDTTAKTLT-NDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAP------------- 84 (347)
T ss_dssp EEEEETTTTEEE-EEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEE-------------
T ss_pred EEEEcCCCCeEE-EeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecC-------------
Confidence 556666677665 3221 1112366789999999 666654 4799999998887766541100
Q ss_pred cccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC-CCceEEEEcc
Q 004067 225 EEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA-GGPVSWMDLQ 303 (776)
Q Consensus 225 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~l~~~ 303 (776)
......++|+|||+.|++..... ..+.+|+++ ++....+...
T Consensus 85 --~~~p~~~a~spdg~~l~~~~~~~-----------------------------------~~v~v~~~~~~g~~~~~~~~ 127 (347)
T 3hfq_A 85 --GTPPAYVAVDEARQLVYSANYHK-----------------------------------GTAEVMKIAADGALTLTDTV 127 (347)
T ss_dssp --SCCCSEEEEETTTTEEEEEETTT-----------------------------------TEEEEEEECTTSCEEEEEEE
T ss_pred --CCCCEEEEECCCCCEEEEEeCCC-----------------------------------CEEEEEEeCCCCCeeeccee
Confidence 00134688999999888765322 236677774 4444333221
Q ss_pred cC---CCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECC-CCceEEEEEeccC-ceeecccccccCCCCccc
Q 004067 304 CG---GTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQRKVILVEELD-SWVNLHDCFTPLDKGVTK 378 (776)
Q Consensus 304 ~~---~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~ 378 (776)
.. .+........+..++|||||+ ++.. +.. ...|++|+++ +|....+...... ......-.|+|
T Consensus 128 ~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~-~~~--~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp------- 196 (347)
T 3hfq_A 128 QHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI-DLG--SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP------- 196 (347)
T ss_dssp ECCCCCSSTTCSSCCEEEEEECTTSC-EEEE-ETT--TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT-------
T ss_pred ecCCCCCCccccCCCceEEEECCCCc-EEEE-eCC--CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC-------
Confidence 00 000011233567799999999 5443 333 2358888887 6766554332111 00000112222
Q ss_pred cCCeEEEEeccCCceEEEEEeCCCceeecccc---CC------eEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCC
Q 004067 379 YSGGFIWASEKTGFRHLYLHDINGTCLGPITE---GD------WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 449 (776)
Q Consensus 379 ~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~---~~------~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~ 449 (776)
++..+++....++.-.+|.++..+++.+.+.. .. ..... +.|+|||++||+....++ .+.+|.++.
T Consensus 197 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-i~~spdG~~l~v~~~~~~--~v~v~~~~~-- 271 (347)
T 3hfq_A 197 DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAA-IRLSHDGHFLYVSNRGYN--TLAVFAVTA-- 271 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEE-EEECTTSCEEEEEEETTT--EEEEEEECG--
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCccee-EEECCCCCEEEEEeCCCC--EEEEEEECC--
Confidence 22234554555663344444443455332211 11 22333 459999999888776543 367777764
Q ss_pred CCCCccccceeecC-CCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEE--EcCCCce
Q 004067 450 DWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLC--SLQDGSL 502 (776)
Q Consensus 450 ~g~~~~~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~--~~~~~~~ 502 (776)
+|. ......+.. ......++|||||++|+....... .+.++ +..+|+.
T Consensus 272 ~g~--~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~---~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 272 DGH--LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD---NATLYARDLTSGKL 322 (347)
T ss_dssp GGC--EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT---EEEEEEECTTTCCE
T ss_pred CCc--EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC---cEEEEEEeCCCCeE
Confidence 332 112334443 223568899999998877655433 35555 6656663
No 294
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.59 E-value=2.4e-12 Score=134.13 Aligned_cols=278 Identities=11% Similarity=0.062 Sum_probs=180.5
Q ss_pred CCceeEcCC-CCEEEEEeCCCCcCcceEEEEecCCCce------EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeee
Q 004067 57 PTSIGFSPD-DNLITYLLSPDHSLSRKVFSFDPKTCKQ------ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTR 129 (776)
Q Consensus 57 ~~~~~~SpD-G~~ia~~~~~~~~~~~~l~~~~~~~~~~------~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 129 (776)
++.++|||| |+.|+-.+. + ..|.+||+.+++. +.+..| ...+..
T Consensus 41 V~~v~~sp~~~~~l~S~s~-D----~~i~vWd~~~~~~~~~~~~~~l~~h------------------------~~~V~~ 91 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASR-D----KTIIMWKLTRDETNYGIPQRALRGH------------------------SHFVSD 91 (340)
T ss_dssp EEEEEECTTCTTEEEEEET-T----SCEEEEEECCSSSCSEEEEEEECCC------------------------SSCEEE
T ss_pred EEEEEEeCCCCCEEEEEcC-C----CeEEEEECCCCCcccceeeEEEeCC------------------------CCCEEE
Confidence 689999998 577775443 2 4699999876542 122222 246889
Q ss_pred EEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEee
Q 004067 130 YEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTH 207 (776)
Q Consensus 130 ~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~ 207 (776)
..|+| ||+.|+.. .++.|++|+............ .........++|+++.|+..+. +.+.+|++..........
T Consensus 92 ~~~s~---dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~ 167 (340)
T 4aow_A 92 VVISS---DGQFALSGSWDGTLRLWDLTTGTTTRRFVG-HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 167 (340)
T ss_dssp EEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred EEECC---CCCEEEEEcccccceEEeecccceeeeecC-CCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEe
Confidence 99999 99999876 788899999998877623332 2234667889999999888765 578999987665544433
Q ss_pred CCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEE
Q 004067 208 GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRL 287 (776)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l 287 (776)
.+.. ..+..+.|++++...++.+.... ..|
T Consensus 168 ~~~~----------------~~v~~~~~~~~~~~~~~~s~~~d----------------------------------~~i 197 (340)
T 4aow_A 168 ESHS----------------EWVSCVRFSPNSSNPIIVSCGWD----------------------------------KLV 197 (340)
T ss_dssp SSCS----------------SCEEEEEECSCSSSCEEEEEETT----------------------------------SCE
T ss_pred cccc----------------CcccceEEccCCCCcEEEEEcCC----------------------------------CEE
Confidence 2211 11345678888765444332110 237
Q ss_pred EEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeeccc
Q 004067 288 GVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHD 367 (776)
Q Consensus 288 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 367 (776)
.+||+.+++..... ..+...+..++|+|||++|+..+ .+..|.+||+.++.............. -
T Consensus 198 ~i~d~~~~~~~~~~--------~~h~~~v~~~~~s~~~~~l~s~s----~Dg~i~iwd~~~~~~~~~~~~~~~v~~---~ 262 (340)
T 4aow_A 198 KVWNLANCKLKTNH--------IGHTGYLNTVTVSPDGSLCASGG----KDGQAMLWDLNEGKHLYTLDGGDIINA---L 262 (340)
T ss_dssp EEEETTTTEEEEEE--------CCCSSCEEEEEECTTSSEEEEEE----TTCEEEEEETTTTEEEEEEECSSCEEE---E
T ss_pred EEEECCCCceeeEe--------cCCCCcEEEEEECCCCCEEEEEe----CCCeEEEEEeccCceeeeecCCceEEe---e
Confidence 89999988765542 45667789999999999877665 456799999998876554443332111 1
Q ss_pred ccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeec-cc---------cCCeEEEEEEeecCCCcEEEEEEccCCC
Q 004067 368 CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGP-IT---------EGDWMVEQIVGVNEASGQVYFTGTLDGP 437 (776)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~-lt---------~~~~~~~~~~~~s~dg~~i~~~~~~~~~ 437 (776)
.+.+++.++++..++ .|++|+++++.... +. .+...+..+ .|+|||++|+. +..++.
T Consensus 263 ---------~~~~~~~~~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l-~~s~dg~~l~s-gs~Dg~ 329 (340)
T 4aow_A 263 ---------CFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL-AWSADGQTLFA-GYTDNL 329 (340)
T ss_dssp ---------EECSSSSEEEEEETT--EEEEEETTTTEEEEEECCC-------CCCCCEEEE-EECTTSSEEEE-EETTSC
T ss_pred ---------ecCCCCceeeccCCC--EEEEEECCCCeEEEeccccceeeeccCCCCCEEEE-EECCCCCEEEE-EeCCCE
Confidence 122333334444455 79999988765321 21 123345555 49999997554 444543
Q ss_pred ceeeEEEEEe
Q 004067 438 LESHLYCAKL 447 (776)
Q Consensus 438 ~~~~l~~~~~ 447 (776)
+.||++..
T Consensus 330 --v~iW~~~t 337 (340)
T 4aow_A 330 --VRVWQVTI 337 (340)
T ss_dssp --EEEEEEEC
T ss_pred --EEEEeCCC
Confidence 88999884
No 295
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.59 E-value=1.6e-12 Score=135.82 Aligned_cols=284 Identities=13% Similarity=0.035 Sum_probs=171.4
Q ss_pred CeeeEEEee--cCC-CceEEEEe-CCCcEEEEeCCCCcc-------ceecCCCCCCCccCceeCCCCCEEEEEEC-CcEE
Q 004067 126 GVTRYEWVK--TSS-KKKIIMVP-LPDGIYFQDLSCSKP-------ELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELH 193 (776)
Q Consensus 126 ~~~~~~~sp--~~~-dg~~l~~~-~~~~l~~~d~~~~~~-------~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~ 193 (776)
.+....|.+ .++ ||+.|+.. .++.|.+||+.+++. ...+..+.. .+....|+||++.|+..+. +.|.
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~-~V~~~~~~~~~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH-FVSDLALSQENCFAISSSWDKTLR 101 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS-CEEEEEECSSTTEEEEEETTSEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC-ceEEEEECCCCCEEEEEcCCCcEE
Confidence 577777721 122 88888876 678999999976432 113443333 4788999999999887774 5799
Q ss_pred EEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCccee
Q 004067 194 VLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 273 (776)
Q Consensus 194 ~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (776)
+||+.+++.......... .+..++|+|||+.|+..+.+
T Consensus 102 lwd~~~~~~~~~~~~h~~-----------------~v~~v~~sp~~~~l~s~~~d------------------------- 139 (343)
T 2xzm_R 102 LWDLRTGTTYKRFVGHQS-----------------EVYSVAFSPDNRQILSAGAE------------------------- 139 (343)
T ss_dssp EEETTSSCEEEEEECCCS-----------------CEEEEEECSSTTEEEEEETT-------------------------
T ss_pred EEECCCCcEEEEEcCCCC-----------------cEEEEEECCCCCEEEEEcCC-------------------------
Confidence 999998875433222211 14578999999998876643
Q ss_pred cCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCC----------eEEEEEEeecCceEEEEE
Q 004067 274 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGN----------ILTAQVLNRSQTKLKVLK 343 (776)
Q Consensus 274 ~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg----------~~l~~~~~~~~~~~~l~~ 343 (776)
..|.+||+.+......... ..+...+..+.|+|++ ..++..+ .+..|.+
T Consensus 140 -----------~~i~~wd~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~----~d~~i~i 198 (343)
T 2xzm_R 140 -----------REIKLWNILGECKFSSAEK------ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG----WDGRLKV 198 (343)
T ss_dssp -----------SCEEEEESSSCEEEECCTT------TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE----TTSEEEE
T ss_pred -----------CEEEEEeccCCceeeeecc------cCCCceeeeeeeccccccccccCCCCCEEEEEc----CCCEEEE
Confidence 2478999885544333211 2455678899999997 4555544 3557999
Q ss_pred EECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCC-CceeeccccCCeEEEEEEeec
Q 004067 344 FDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDIN-GTCLGPITEGDWMVEQIVGVN 422 (776)
Q Consensus 344 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~-g~~~~~lt~~~~~~~~~~~~s 422 (776)
||........+..+....... .|+| ++.++++...+| .|++||+. .+...........+..+ .|+
T Consensus 199 wd~~~~~~~~~~~h~~~v~~~---~~s~--------~g~~l~sgs~dg--~v~iwd~~~~~~~~~~~~~~~~v~~v-~~s 264 (343)
T 2xzm_R 199 WNTNFQIRYTFKAHESNVNHL---SISP--------NGKYIATGGKDK--KLLIWDILNLTYPQREFDAGSTINQI-AFN 264 (343)
T ss_dssp EETTTEEEEEEECCSSCEEEE---EECT--------TSSEEEEEETTC--EEEEEESSCCSSCSEEEECSSCEEEE-EEC
T ss_pred EcCCCceeEEEcCccccceEE---EECC--------CCCEEEEEcCCC--eEEEEECCCCcccceeecCCCcEEEE-EEC
Confidence 995443333333333222211 2333 334666666677 89999983 33322222222335554 499
Q ss_pred CCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeec-----------CC-CCeEEEEEcCCcCEEEEEeeCCCCCC
Q 004067 423 EASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-----------NG-KGKHVAVLDHNMRNFVDFHDSLDSPP 490 (776)
Q Consensus 423 ~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~-----------~~-~~~~~~~~spdg~~l~~~~~~~~~~~ 490 (776)
|+++.++. +. ++. +.+|.+.. +.. .....+. .+ ..+..++|+|||+.|+..... .
T Consensus 265 p~~~~la~-~~-d~~--v~iw~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D----g 331 (343)
T 2xzm_R 265 PKLQWVAV-GT-DQG--VKIFNLMT---QSK--APVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD----G 331 (343)
T ss_dssp SSSCEEEE-EE-SSC--EEEEESSS---CCS--CSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT----S
T ss_pred CCCCEEEE-EC-CCC--EEEEEeCC---CCC--CceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC----c
Confidence 99986543 33 322 67776642 210 0111222 11 236788999999988776433 3
Q ss_pred EEEEEEcCCC
Q 004067 491 RILLCSLQDG 500 (776)
Q Consensus 491 ~i~~~~~~~~ 500 (776)
.|.+|+..++
T Consensus 332 ~v~~w~~~~g 341 (343)
T 2xzm_R 332 VIRTFSFETS 341 (343)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEEcc
Confidence 6888887554
No 296
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.58 E-value=4.6e-14 Score=145.76 Aligned_cols=198 Identities=16% Similarity=0.115 Sum_probs=118.7
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCCCCCchhhhhhhhhccC-CccHHHHHHHHHHHHHc
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCG-RIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~g~~~~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~ 632 (776)
|+||++||++++.. .|..++..|++ .+|.|+++|+||+|.|...... .+. ....+|+.+.++.+...
T Consensus 39 p~lvllHG~~~~~~-------~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~----~~~~~~~a~dl~~~l~~l~~~ 107 (316)
T 3c5v_A 39 PVLLLLHGGGHSAL-------SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPE----DLSAETMAKDVGNVVEAMYGD 107 (316)
T ss_dssp CEEEEECCTTCCGG-------GGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTT----CCCHHHHHHHHHHHHHHHHTT
T ss_pred cEEEEECCCCcccc-------cHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCcc----ccCHHHHHHHHHHHHHHHhcc
Confidence 78999999766543 34455677776 3899999999999988642110 000 01144555555555321
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhh--CCCceEEEEEcCCCCCcc----------------ccccc---c---------
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTSWD----------------GYDTF---Y--------- 682 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~--~~~~~~~~v~~~~~~~~~----------------~~~~~---~--------- 682 (776)
+ .+++.|+||||||.+|+.+|.+ +|+ ++++|+.++..... .+... .
T Consensus 108 --~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (316)
T 3c5v_A 108 --L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQI 183 (316)
T ss_dssp --C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHHHHHHTTSC
T ss_pred --C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHHHhhhcccc
Confidence 1 1589999999999999999985 477 88888876532100 00000 0
Q ss_pred ----------cccccCCC-----CC--Cccchh-cCC--------------hhhhhccCCCcEEEEecCCCCccChHHHH
Q 004067 683 ----------TEKYMGLP-----SE--DPVGYE-YSS--------------VMHHVHKMKGKLLLVHGMIDENVHFRHTA 730 (776)
Q Consensus 683 ----------~~~~~~~~-----~~--~~~~~~-~~~--------------~~~~~~~i~~P~lii~G~~D~~v~~~~~~ 730 (776)
........ .. ....+. ... ....+.++++|+|+++|..|...+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~~~~~~~-- 261 (316)
T 3c5v_A 184 RNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLT-- 261 (316)
T ss_dssp CCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCCCCHHHH--
T ss_pred cchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccccccHHH--
Confidence 00000000 00 000000 000 011233688999999999997643221
Q ss_pred HHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 004067 731 RLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 731 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 775 (776)
...+ ....++++++++||.+ ..+.++.+.+.+.+||.+.
T Consensus 262 --~~~~---~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 300 (316)
T 3c5v_A 262 --IGQM---QGKFQMQVLPQCGHAV-HEDAPDKVAEAVATFLIRH 300 (316)
T ss_dssp --HHHH---TTCSEEEECCCCSSCH-HHHSHHHHHHHHHHHHHHT
T ss_pred --HHhh---CCceeEEEcCCCCCcc-cccCHHHHHHHHHHHHHhc
Confidence 1222 2356899999999987 5567889999999999753
No 297
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.58 E-value=6.1e-14 Score=148.11 Aligned_cols=238 Identities=16% Similarity=0.136 Sum_probs=145.8
Q ss_pred CceEEEEEcC--CCcE--EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccc---cc--cc--------cch-hhhHHH
Q 004067 523 PPDIVQIQAN--DGTV--LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCD---SW--IN--------TVD-MRAQYL 584 (776)
Q Consensus 523 ~~~~~~~~~~--dg~~--l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~---~~--~~--------~~~-~~~~~l 584 (776)
...++.+.+. +|.. ..+.++.|.... .+.|+|.+-||..+...-+. .+ .. .++ .+...+
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~---~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~ 150 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPA---SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGW 150 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCC---SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCC---CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHH
Confidence 4556666654 4544 788999998752 35799999999544321000 00 00 011 234556
Q ss_pred -HhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCC-CCCcEEEEeechHHHHHHHHHhhC---
Q 004067 585 -RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA-KVGHIGLYGWSYGGYLSAITLARF--- 659 (776)
Q Consensus 585 -~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~i-d~~~i~l~G~S~GG~~a~~~a~~~--- 659 (776)
.++||+|+++||+|.|.. +...... ...+.|.++++..+. .+ ...+++++|||+||..+++++...
T Consensus 151 ~l~~G~~Vv~~Dy~G~G~~---y~~~~~~---~~~vlD~vrAa~~~~---~~~~~~~v~l~G~S~GG~aal~aa~~~~~y 221 (462)
T 3guu_A 151 ALQQGYYVVSSDHEGFKAA---FIAGYEE---GMAILDGIRALKNYQ---NLPSDSKVALEGYSGGAHATVWATSLAESY 221 (462)
T ss_dssp HHHTTCEEEEECTTTTTTC---TTCHHHH---HHHHHHHHHHHHHHT---TCCTTCEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred HHhCCCEEEEecCCCCCCc---ccCCcch---hHHHHHHHHHHHHhc---cCCCCCCEEEEeeCccHHHHHHHHHhChhh
Confidence 899999999999999853 2211111 011334444444443 23 247999999999999999988754
Q ss_pred -CC-ceEEEEEcCCCCCcccc--------------------cccc---c---cccc-----------CC-----------
Q 004067 660 -PD-VFQCAVSGAPVTSWDGY--------------------DTFY---T---EKYM-----------GL----------- 689 (776)
Q Consensus 660 -~~-~~~~~v~~~~~~~~~~~--------------------~~~~---~---~~~~-----------~~----------- 689 (776)
|+ .+.++++.++..++... ...| . +.++ ..
T Consensus 222 apel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~ 301 (462)
T 3guu_A 222 APELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLT 301 (462)
T ss_dssp CTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHH
T ss_pred cCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHh
Confidence 33 47788888776653210 0000 0 0000 00
Q ss_pred -CCCCccchhc-CCh---------hh-----------hhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEE
Q 004067 690 -PSEDPVGYEY-SSV---------MH-----------HVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILI 747 (776)
Q Consensus 690 -~~~~~~~~~~-~~~---------~~-----------~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 747 (776)
.......+.. .++ +. ...+.+.|+|++||.+|.++|+..+.++++.+++.|.++++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~ 381 (462)
T 3guu_A 302 YPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSP 381 (462)
T ss_dssp CTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 0000000100 010 00 0124568999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 748 FPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 748 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
|++++|.... ......+.+||+++|
T Consensus 382 y~~~~H~~~~----~~~~~d~l~WL~~r~ 406 (462)
T 3guu_A 382 YPIAEHLTAE----IFGLVPSLWFIKQAF 406 (462)
T ss_dssp ESSCCHHHHH----HHTHHHHHHHHHHHH
T ss_pred ECcCCccCch----hhhHHHHHHHHHHHh
Confidence 9999997632 233678889988753
No 298
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.57 E-value=6e-13 Score=153.49 Aligned_cols=277 Identities=14% Similarity=0.136 Sum_probs=177.3
Q ss_pred CCceeEcCCCC-EEEEEeCCCCcCcceEEEEecCCCc------eEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeee
Q 004067 57 PTSIGFSPDDN-LITYLLSPDHSLSRKVFSFDPKTCK------QELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTR 129 (776)
Q Consensus 57 ~~~~~~SpDG~-~ia~~~~~~~~~~~~l~~~~~~~~~------~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 129 (776)
++.++|+||+. .|+-.+. + ..|.+|++..+. .+.+..|. ..+..
T Consensus 385 V~~v~~~~~~~~~l~s~s~-D----~~i~~W~~~~~~~~~~~~~~~~~~h~------------------------~~v~~ 435 (694)
T 3dm0_A 385 VTAIATPIDNADIIVSASR-D----KSIILWKLTKDDKAYGVAQRRLTGHS------------------------HFVED 435 (694)
T ss_dssp EEEEECCTTCCSEEEEEET-T----SEEEEEECCCSTTCSCEEEEEEECCS------------------------SCEEE
T ss_pred eEEEEecCCCCCEEEEEeC-C----CcEEEEEccCCCcccccccceecCCC------------------------CcEEE
Confidence 57889999875 5553333 3 469999987542 23444432 36889
Q ss_pred EEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEee
Q 004067 130 YEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTH 207 (776)
Q Consensus 130 ~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~ 207 (776)
..|+| ||+.|+.. .++.|.+||+.+++....+..+.. .+..+.|||||+.|+..+. +.|.+|++.+.....+..
T Consensus 436 v~~s~---~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 511 (694)
T 3dm0_A 436 VVLSS---DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK-DVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE 511 (694)
T ss_dssp EEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred EEECC---CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC-CEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc
Confidence 99999 99999876 688999999999877645544443 4888999999999988875 579999987665544433
Q ss_pred CCCCCceecCCcccceecccCCcceEEECCCCC--eEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 208 GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSK--FIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
... +...+ +..+.|+|++. .|+..+.+ .
T Consensus 512 ~~~------~h~~~--------v~~~~~~~~~~~~~l~s~s~d------------------------------------~ 541 (694)
T 3dm0_A 512 GGE------GHRDW--------VSCVRFSPNTLQPTIVSASWD------------------------------------K 541 (694)
T ss_dssp STT------SCSSC--------EEEEEECSCSSSCEEEEEETT------------------------------------S
T ss_pred CCC------CCCCc--------EEEEEEeCCCCcceEEEEeCC------------------------------------C
Confidence 221 11111 44788999984 45544432 2
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeec
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 365 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 365 (776)
.|.+||+.+++....- ..+...+..++|||||+.|+..+ .+..|.+||+.+++............
T Consensus 542 ~v~vwd~~~~~~~~~~--------~~h~~~v~~v~~spdg~~l~sg~----~Dg~i~iwd~~~~~~~~~~~~~~~v~--- 606 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTL--------AGHTGYVSTVAVSPDGSLCASGG----KDGVVLLWDLAEGKKLYSLEANSVIH--- 606 (694)
T ss_dssp CEEEEETTTCCEEEEE--------CCCSSCEEEEEECTTSSEEEEEE----TTSBCEEEETTTTEEEECCBCSSCEE---
T ss_pred eEEEEECCCCcEEEEE--------cCCCCCEEEEEEeCCCCEEEEEe----CCCeEEEEECCCCceEEEecCCCcEE---
Confidence 4799999988765431 45677899999999999887766 44569999999886533222221111
Q ss_pred ccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeec-cccCC-------------------eEEEEEEeecCCC
Q 004067 366 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGP-ITEGD-------------------WMVEQIVGVNEAS 425 (776)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~-lt~~~-------------------~~~~~~~~~s~dg 425 (776)
.-.|+| ++.++..+ .++ .|.+||+.++.... +.... ..+.. +.|||||
T Consensus 607 ~~~~sp--------~~~~l~~~-~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~spdg 674 (694)
T 3dm0_A 607 ALCFSP--------NRYWLCAA-TEH--GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTS-LNWSADG 674 (694)
T ss_dssp EEEECS--------SSSEEEEE-ETT--EEEEEETTTTEEEEEECCCCC----------------CCCCEEE-EEECTTS
T ss_pred EEEEcC--------CCcEEEEE-cCC--CEEEEECCCCCChhhhccccccccccccccccccCCceeEEeee-EEEcCCC
Confidence 111222 22244333 333 59999988775432 21110 01233 4599999
Q ss_pred cEEEEEEccCCCceeeEEEEE
Q 004067 426 GQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 426 ~~i~~~~~~~~~~~~~l~~~~ 446 (776)
++|+. ++.++ .+.+|.+.
T Consensus 675 ~~l~s-gs~Dg--~i~iW~i~ 692 (694)
T 3dm0_A 675 STLFS-GYTDG--VIRVWGIG 692 (694)
T ss_dssp SEEEE-EETTS--EEEEEEC-
T ss_pred CEEEE-EcCCC--eEEEEecc
Confidence 97654 44444 37888764
No 299
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.57 E-value=2.8e-16 Score=159.51 Aligned_cols=196 Identities=11% Similarity=-0.057 Sum_probs=116.2
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 633 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 633 (776)
.|.||++||.+++.. .|..++..|.+ ||.|+++|+||+|.+.... ....+.++.+.+..++...
T Consensus 51 ~~~lvllHG~~~~~~-------~~~~l~~~L~~-~~~v~~~D~~G~G~S~~~~--------~~~~~~~~a~~~~~~l~~~ 114 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVS-------AFRGWQERLGD-EVAVVPVQLPGRGLRLRER--------PYDTMEPLAEAVADALEEH 114 (280)
T ss_dssp SEEEEEECCTTCCGG-------GGTTHHHHHCT-TEEEEECCCTTSGGGTTSC--------CCCSHHHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCChH-------HHHHHHHhcCC-CceEEEEeCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHh
Confidence 388999999876644 34455777776 9999999999999774321 1223455554444444332
Q ss_pred CCCCCcEEEEeechHHHHHHHHHhhCCCceE----EEEEcCCCCCccccc--------cccc---ccccCCCCC---Ccc
Q 004067 634 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQ----CAVSGAPVTSWDGYD--------TFYT---EKYMGLPSE---DPV 695 (776)
Q Consensus 634 ~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~----~~v~~~~~~~~~~~~--------~~~~---~~~~~~~~~---~~~ 695 (776)
. ...++.|+||||||.+|+.+|.++|+++. .+++........... ..+. ..+.+.+.. ...
T Consensus 115 ~-~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (280)
T 3qmv_A 115 R-LTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAA 193 (280)
T ss_dssp T-CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC--------
T ss_pred C-CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHH
Confidence 1 34689999999999999999998876655 555543322110000 0000 000011110 000
Q ss_pred c-------h-------hcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCC-CCc
Q 004067 696 G-------Y-------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR-HRD 760 (776)
Q Consensus 696 ~-------~-------~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~-~~~ 760 (776)
. + .... .....++++|+|+++|++|..+++.....+.+.+ ....+++++++ ||.... .+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~~~ 268 (280)
T 3qmv_A 194 YFDRRLPVLRADLRACERYD-WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYT---TGSFLRRHLPG-NHFFLNGGPS 268 (280)
T ss_dssp -CCTTHHHHHHHHHHHHTCC-CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGB---SSCEEEEEEEE-ETTGGGSSHH
T ss_pred HHHHHHHHHHHHHHHHHhcc-ccCCCceecCeEEEEecCCCCcChHHHHHHHHhc---CCceEEEEecC-CCeEEcCchh
Confidence 0 0 0000 0113577899999999999999988776665543 34567888885 997632 244
Q ss_pred HHHHHHHHHHH
Q 004067 761 RIYMEERIWEF 771 (776)
Q Consensus 761 ~~~~~~~~~~f 771 (776)
..++.+.+.+|
T Consensus 269 ~~~~~~~i~~~ 279 (280)
T 3qmv_A 269 RDRLLAHLGTE 279 (280)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 55555555544
No 300
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.57 E-value=1.2e-13 Score=146.66 Aligned_cols=203 Identities=12% Similarity=0.033 Sum_probs=131.0
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.+..++|||||++|+..+. ...|.+|++.++..+.+.... .+...+....|+|
T Consensus 13 ~v~~~~~s~~g~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~---------------------~h~~~v~~~~~s~- 65 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTA-----TNQVELYEQDGNGWKHARTFS---------------------DHDKIVTCVDWAP- 65 (377)
T ss_dssp CCSCCEECSSSSEEECCCS-----SSCBCEEEEETTEEEECCCBC---------------------CCSSCEEEEEECT-
T ss_pred cEEEEEECCCCCEEEEecC-----CCEEEEEEccCCceEEEEEEe---------------------cCCceEEEEEEeC-
Confidence 3589999999999985433 346999999887433322111 0124688999999
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCc---cceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCc----eeEEe
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSK---PELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINE----QRQLT 206 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~---~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~----~~~lt 206 (776)
||++|+.. .++.|++||+.+++ ....+..... .+..+.|+|||+.|+..+. +.|.+|++.+++ .+.+.
T Consensus 66 --~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (377)
T 3dwl_C 66 --KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNR-AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK 142 (377)
T ss_dssp --TTCCEEEEETTSSEEEC------CCCCEEECCCCSS-CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC
T ss_pred --CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCC-ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee
Confidence 99998876 67899999999887 2213443333 4888999999999998875 579999999886 33332
Q ss_pred eCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEE
Q 004067 207 HGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVR 286 (776)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 286 (776)
.... ..+..++|+|||+.|+..+.+. .
T Consensus 143 ~~h~-----------------~~v~~~~~~~~~~~l~~~~~d~------------------------------------~ 169 (377)
T 3dwl_C 143 RPLR-----------------STILSLDWHPNNVLLAAGCADR------------------------------------K 169 (377)
T ss_dssp SSCC-----------------SCEEEEEECTTSSEEEEEESSS------------------------------------C
T ss_pred cccC-----------------CCeEEEEEcCCCCEEEEEeCCC------------------------------------E
Confidence 2011 1145789999999988776432 2
Q ss_pred EEEEEcCCCceE---------------EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce
Q 004067 287 LGVVSAAGGPVS---------------WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 351 (776)
Q Consensus 287 l~~~d~~~~~~~---------------~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~ 351 (776)
|++||+..++.. .+.. . ..+...+..++|+|||++|+..+ .+..|.+||+.+++.
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~v~~~~~sp~~~~l~~~~----~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCA-----E-YPSGGWVHAVGFSPSGNALAYAG----HDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEE-----C-CCCSSSEEEEEECTTSSCEEEEE----TTTEEC-CEECSTTS
T ss_pred EEEEEEEecccCCCccccccccccchhhhhh-----c-ccCCceEEEEEECCCCCEEEEEe----CCCcEEEEECCCCCC
Confidence 567776533211 1100 1 24566789999999999777765 345699999988875
No 301
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.57 E-value=3.8e-13 Score=155.40 Aligned_cols=259 Identities=8% Similarity=0.057 Sum_probs=158.9
Q ss_pred CCceeEc-CCCCEEEEEeCCCCcCcceEEEEecCCC-ceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 57 PTSIGFS-PDDNLITYLLSPDHSLSRKVFSFDPKTC-KQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 57 ~~~~~~S-pDG~~ia~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
...++|| |||++|||.....|....+||++|+++| +. +... + ......+.|||
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~---------~--------------~~~~~~~~Wsp 230 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADK---------V--------------SGTNGEIVWGP 230 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCC---------E--------------EEECSCCEECS
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCcc---------c--------------cCceeeEEEec
Confidence 4678999 9999999999876654567999999998 62 1110 0 01234689999
Q ss_pred cCCCceEEEEeCC------CcEEEEeCCCCccce-ec-CCCCCCCccCceeCCCCCEEEEEEC----CcEEEEecCCC--
Q 004067 135 TSSKKKIIMVPLP------DGIYFQDLSCSKPEL-KL-SSSSCSPVIDPHLSSDGTMIAFVRD----CELHVLNLLIN-- 200 (776)
Q Consensus 135 ~~~dg~~l~~~~~------~~l~~~d~~~~~~~~-~l-~~~~~~~~~~~~~SpDg~~la~~~~----~~l~~~~l~~g-- 200 (776)
||+.|+|... .+||++++.++.... .+ ..........+.|||||++|++... .+||+++++++
T Consensus 231 ---Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~ 307 (751)
T 2xe4_A 231 ---DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA 307 (751)
T ss_dssp ---STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT
T ss_pred ---CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC
Confidence 9999999832 369999999876431 22 1111122456899999999999884 36999999986
Q ss_pred ce--eEEeeCCCCCceecCCcccceecccCCcceEEECCC---CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecC
Q 004067 201 EQ--RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD---SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 275 (776)
Q Consensus 201 ~~--~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (776)
+. +.++.... ...|+|| |+.|+|.+.....
T Consensus 308 ~~~~~~l~~~~~---------------------~~~~s~~~~~g~~l~~~t~~~~a------------------------ 342 (751)
T 2xe4_A 308 HNTLEIVRPREK---------------------GVRYDVQMHGTSHLVILTNEGGA------------------------ 342 (751)
T ss_dssp CCCEEESSCCCT---------------------TCCEEEEEETTTEEEEEECTTTC------------------------
T ss_pred CceeEEeecCCC---------------------CceEEEeeeeCCEEEEEeCCCCC------------------------
Confidence 34 55543221 2236666 9999998753200
Q ss_pred CCCCCCCCeEEEEEEEcCC-CceEE-EEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEEC-------
Q 004067 276 PFAGASNVKVRLGVVSAAG-GPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI------- 346 (776)
Q Consensus 276 ~~~g~~~~~~~l~~~d~~~-~~~~~-l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~------- 346 (776)
....|+++++++ ++.+. +.. ......+..+ +++++.|++...++ ....|+++|+
T Consensus 343 -------~~~~L~~~d~~~~~~~~~~li~-------~~~~~~l~~~--~~~~~~lv~~~~~~-g~~~l~~~dl~~~~~~~ 405 (751)
T 2xe4_A 343 -------VNHKLLIAPRGQPSDWSHVLVD-------HSEDVFMESI--AVRSNYLVVAGRRA-GLTRIWTMMADSQDGVF 405 (751)
T ss_dssp -------TTCEEEEEETTSTTCCCCEEEC-------CCSSEEEEEE--EECSSEEEEEEEET-TEEEEEEEECCTTTSCC
T ss_pred -------CCcEEEEEcCCCcccceeeEEC-------CCCCcEEEEE--EEECCEEEEEEEeC-CEEEEEEEecccccccc
Confidence 115688999876 34333 311 1122234444 44566676665544 5678999996
Q ss_pred CCCc-eEEEEEeccCceeecccccccCCCCccccCCeEEEEec-cCCceEEEEEeCCCceeecccc
Q 004067 347 KTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASE-KTGFRHLYLHDINGTCLGPITE 410 (776)
Q Consensus 347 ~~g~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~g~~~l~~~~~~g~~~~~lt~ 410 (776)
++++ .+.|.-... ..... +..... ...+++.+++... ......+|.+++.+++.+.|+.
T Consensus 406 ~~g~~~~~l~l~~~-~~~~~---~~~~~~-~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 406 KAGTGLREVVMEEP-IFTVH---LVESQM-LEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKV 466 (751)
T ss_dssp CTTTCCEECCCCCS-SCEEE---ECGGGC-CCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEE
T ss_pred cCCccceEECCCCc-eeEEE---eccCcc-cCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 6666 666632111 11100 100000 0123445655543 3445689999998887766653
No 302
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.56 E-value=1.5e-12 Score=139.51 Aligned_cols=276 Identities=11% Similarity=0.083 Sum_probs=178.4
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
..+.||+ +.++..+. ...|++|++++++...+..... ...+..+.|+|
T Consensus 97 ~~~~~s~--~~l~~~~~-----d~~v~lw~~~~~~~~~~~~~~~----------------------~~~v~~v~~s~--- 144 (401)
T 4aez_A 97 NLLDWSN--LNVVAVAL-----ERNVYVWNADSGSVSALAETDE----------------------STYVASVKWSH--- 144 (401)
T ss_dssp BCEEECT--TSEEEEEE-----TTEEEEEETTTCCEEEEEECCT----------------------TCCEEEEEECT---
T ss_pred EEEeecC--CCEEEEEC-----CCeEEEeeCCCCcEeEeeecCC----------------------CCCEEEEEECC---
Confidence 4466665 44554433 2469999999998866664211 24688999999
Q ss_pred CceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCcee
Q 004067 138 KKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTVT 215 (776)
Q Consensus 138 dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~~ 215 (776)
||+.|+.. .++.|.+||+.+++....+.... ..+..+.| +++.|+..+. +.|.+|++..+.....+.....
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---- 217 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQ-ARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHS---- 217 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCS----
T ss_pred CCCEEEEECCCCeEEEEECcCCeEEEEecCCC-CceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCC----
Confidence 99999987 68899999999887663554333 34677777 5677777664 5799999985433222221111
Q ss_pred cCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCC
Q 004067 216 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG 295 (776)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 295 (776)
..+..+.|+|||+.|+....+ ..|.+||+.++
T Consensus 218 ------------~~v~~~~~~~~~~~l~s~~~d------------------------------------~~v~iwd~~~~ 249 (401)
T 4aez_A 218 ------------SEVCGLAWRSDGLQLASGGND------------------------------------NVVQIWDARSS 249 (401)
T ss_dssp ------------SCEEEEEECTTSSEEEEEETT------------------------------------SCEEEEETTCS
T ss_pred ------------CCeeEEEEcCCCCEEEEEeCC------------------------------------CeEEEccCCCC
Confidence 114578899999998877643 24799999987
Q ss_pred ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCC
Q 004067 296 PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKG 375 (776)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (776)
+..... ..+...+..++|+|++..++.+.. +..+..|.+||+.+++............. -.|+|
T Consensus 250 ~~~~~~--------~~~~~~v~~~~~~p~~~~ll~~~~-gs~d~~i~i~d~~~~~~~~~~~~~~~v~~---~~~s~---- 313 (401)
T 4aez_A 250 IPKFTK--------TNHNAAVKAVAWCPWQSNLLATGG-GTMDKQIHFWNAATGARVNTVDAGSQVTS---LIWSP---- 313 (401)
T ss_dssp SEEEEE--------CCCSSCCCEEEECTTSTTEEEEEC-CTTTCEEEEEETTTCCEEEEEECSSCEEE---EEECS----
T ss_pred CccEEe--------cCCcceEEEEEECCCCCCEEEEec-CCCCCEEEEEECCCCCEEEEEeCCCcEEE---EEECC----
Confidence 765432 345667889999999875554432 12356799999999887655544332111 12323
Q ss_pred ccccCCeEEEEec--cCCceEEEEEeCCCceeec---cccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 376 VTKYSGGFIWASE--KTGFRHLYLHDINGTCLGP---ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 376 ~~~~~~~~~~~s~--~~g~~~l~~~~~~g~~~~~---lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
++..++++. .+| .|++|+..+++... +..+...+..+. |++||++|+..+ .++ .+.+|.+.
T Consensus 314 ----~~~~l~~~~g~~dg--~i~v~~~~~~~~~~~~~~~~h~~~v~~~~-~s~dg~~l~s~~-~dg--~i~iw~~~ 379 (401)
T 4aez_A 314 ----HSKEIMSTHGFPDN--NLSIWSYSSSGLTKQVDIPAHDTRVLYSA-LSPDGRILSTAA-SDE--NLKFWRVY 379 (401)
T ss_dssp ----SSSEEEEEECTTTC--EEEEEEEETTEEEEEEEEECCSSCCCEEE-ECTTSSEEEEEC-TTS--EEEEEECC
T ss_pred ----CCCeEEEEeecCCC--cEEEEecCCccceeEEEecCCCCCEEEEE-ECCCCCEEEEEe-CCC--cEEEEECC
Confidence 233444432 456 88888877654333 344455555554 999999765544 443 37777776
No 303
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.56 E-value=5.2e-13 Score=139.45 Aligned_cols=262 Identities=9% Similarity=-0.026 Sum_probs=171.2
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCc----eEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCK----QELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~----~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
+..++|||||++|+..+.+ ..|++|++.+++ .+.+..+. ..+..+.|
T Consensus 14 v~~~~~s~~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~~~------------------------~~v~~~~~ 64 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLRYK------------------------HPLLCCNF 64 (342)
T ss_dssp EEEEEEEGGGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEECS------------------------SCEEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-----CeEEEEEeCCCCccccceeeeecC------------------------CceEEEEE
Confidence 5789999999999876542 469999999887 55555432 36889999
Q ss_pred eecCCCce-EEEEe-CCCcEEEEeC-CCCccceecCC--CCCCCccCceeCCCCCEEEEEEC-CcEEEEecCC-------
Q 004067 133 VKTSSKKK-IIMVP-LPDGIYFQDL-SCSKPELKLSS--SSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLI------- 199 (776)
Q Consensus 133 sp~~~dg~-~l~~~-~~~~l~~~d~-~~~~~~~~l~~--~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~------- 199 (776)
+| ||+ .|+.. .++.|++||+ .+++.. .+.. ... .+..+.|+| ++.|+.... +.|.+|++.+
T Consensus 65 ~~---~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~~~~~-~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (342)
T 1yfq_A 65 ID---NTDLQIYVGTVQGEILKVDLIGSPSFQ-ALTNNEANL-GICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIA 138 (342)
T ss_dssp EE---SSSEEEEEEETTSCEEEECSSSSSSEE-ECBSCCCCS-CEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEE
T ss_pred CC---CCCcEEEEEcCCCeEEEEEeccCCceE-eccccCCCC-ceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccc
Confidence 99 999 78776 6889999999 888776 6665 443 478899999 888888775 5699999876
Q ss_pred --CceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCC
Q 004067 200 --NEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPF 277 (776)
Q Consensus 200 --g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (776)
++........ ..+..+.|+|++ |+....+
T Consensus 139 ~~~~~~~~~~~~------------------~~v~~~~~~~~~--l~~~~~d----------------------------- 169 (342)
T 1yfq_A 139 VKNLNSNNTKVK------------------NKIFTMDTNSSR--LIVGMNN----------------------------- 169 (342)
T ss_dssp EEESCSSSSSSC------------------CCEEEEEECSSE--EEEEEST-----------------------------
T ss_pred ccCCeeeEEeeC------------------CceEEEEecCCc--EEEEeCC-----------------------------
Confidence 3321111110 124578899988 5554422
Q ss_pred CCCCCCeEEEEEEEcCC-CceEEEEcccCCCCCCCCcceEEEEEecc-CCeEEEEEEeecCceEEEEEEECCCC------
Q 004067 278 AGASNVKVRLGVVSAAG-GPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTG------ 349 (776)
Q Consensus 278 ~g~~~~~~~l~~~d~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~g------ 349 (776)
..|.+||+.+ ++....... ..+...+..+.|+| ||+.++... .+..|.+|+.+.+
T Consensus 170 -------~~i~i~d~~~~~~~~~~~~~------~~~~~~i~~i~~~~~~~~~l~~~~----~dg~i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 170 -------SQVQWFRLPLCEDDNGTIEE------SGLKYQIRDVALLPKEQEGYACSS----IDGRVAVEFFDDQGDDYNS 232 (342)
T ss_dssp -------TEEEEEESSCCTTCCCEEEE------CSCSSCEEEEEECSGGGCEEEEEE----TTSEEEEEECCTTCCSTTC
T ss_pred -------CeEEEEECCccccccceeee------cCCCCceeEEEECCCCCCEEEEEe----cCCcEEEEEEcCCCccccc
Confidence 3589999987 543211111 34456788999999 999777765 3445778777665
Q ss_pred ceEEEEE-ecc-------CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccC-CeEEEEEE
Q 004067 350 QRKVILV-EEL-------DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEG-DWMVEQIV 419 (776)
Q Consensus 350 ~~~~l~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~-~~~~~~~~ 419 (776)
....... +.. ...+ ..-.|+| ++.++++...+| .|++||+..++ ...+..+ ...+..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i-~~~~~s~--------~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPV-NSIEFSP--------RHKFLYTAGSDG--IISCWNLQTRKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCE-EEEEECT--------TTCCEEEEETTS--CEEEEETTTTEEEEECCCCSSSEEEEEE
T ss_pred ccceeeecccccccccccceeE-EEEEEcC--------CCCEEEEecCCc--eEEEEcCccHhHhhhhhcccCCCceEec
Confidence 3333322 221 0010 0111222 234556666667 89999988665 4556655 55566553
Q ss_pred eecCCCcEEEEEEc
Q 004067 420 GVNEASGQVYFTGT 433 (776)
Q Consensus 420 ~~s~dg~~i~~~~~ 433 (776)
++|+.|+..+.
T Consensus 302 ---~~~~~l~s~s~ 312 (342)
T 1yfq_A 302 ---CSDNILCLATS 312 (342)
T ss_dssp ---ECSSEEEEEEE
T ss_pred ---CCCCeEEEEec
Confidence 88887665554
No 304
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.56 E-value=1.7e-13 Score=148.43 Aligned_cols=288 Identities=9% Similarity=0.015 Sum_probs=174.1
Q ss_pred CCceeEcC-CCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 57 PTSIGFSP-DDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 57 ~~~~~~Sp-DG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
++.++|+| +++.||.-+. ...|.+||+++++...+..... +...|....|+|
T Consensus 122 V~~l~~~P~~~~~lasGs~-----dg~i~lWd~~~~~~~~~~~~~g---------------------H~~~V~~l~f~p- 174 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSK-----GGDIMLWNFGIKDKPTFIKGIG---------------------AGGSITGLKFNP- 174 (435)
T ss_dssp EEEEEECSSCTTCEEEEET-----TSCEEEECSSCCSCCEEECCCS---------------------SSCCCCEEEECS-
T ss_pred EEEEEEeCCCCCEEEEEeC-----CCEEEEEECCCCCceeEEEccC---------------------CCCCEEEEEEeC-
Confidence 57899999 5667775443 2469999999887544442111 124688999997
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCccceecCCCCC--CCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCC
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSC--SPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~--~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~ 211 (776)
.|++.|+.. .++.|.+||+.++... .+..... ..+..+.|+|||+.|+.... +.|++|++.+.....+.....
T Consensus 175 -~~~~~l~s~s~D~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~- 251 (435)
T 4e54_B 175 -LNTNQFYASSMEGTTRLQDFKGNILR-VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKK- 251 (435)
T ss_dssp -SCTTEEEEECSSSCEEEEETTSCEEE-EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSS-
T ss_pred -CCCCEEEEEeCCCEEEEeeccCCcee-EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccc-
Confidence 146677655 7889999999987765 4333221 22566899999999887764 579999998665443321111
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
.+..+.|+|+++.++.....+ ..|.+||
T Consensus 252 -----------------~v~~v~~~p~~~~~~~s~s~d-----------------------------------~~v~iwd 279 (435)
T 4e54_B 252 -----------------KVTHVALNPCCDWFLATASVD-----------------------------------QTVKIWD 279 (435)
T ss_dssp -----------------CEEEEEECTTCSSEEEEEETT-----------------------------------SBCCEEE
T ss_pred -----------------eEEeeeecCCCceEEEEecCc-----------------------------------ceeeEEe
Confidence 145789999998766544322 2367888
Q ss_pred cCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEE-EeccC--cee-eccc
Q 004067 292 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL-VEELD--SWV-NLHD 367 (776)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~--~~~-~~~~ 367 (776)
+.+++...... ....+...+..++|||||+.|+..+ .+..|.+||+.++...... .+... .+. ....
T Consensus 280 ~~~~~~~~~~~-----~~~~h~~~v~~~~~spdg~~l~s~~----~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 280 LRQVRGKASFL-----YSLPHRHPVNAACFSPDGARLLTTD----QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp TTTCCSSSCCS-----BCCBCSSCEEECCBCTTSSEEEEEE----SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred cccccccceEE-----EeeeccccccceeECCCCCeeEEEc----CCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 87654321100 0134567789999999999887765 3456999999887754332 22111 110 0011
Q ss_pred ccccCCCCccccCCeEEEEeccC---------CceEEEEEeCCCcee-ecccc-CCeEEEEEEeecCCCcEEEEEEccCC
Q 004067 368 CFTPLDKGVTKYSGGFIWASEKT---------GFRHLYLHDINGTCL-GPITE-GDWMVEQIVGVNEASGQVYFTGTLDG 436 (776)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~s~~~---------g~~~l~~~~~~g~~~-~~lt~-~~~~~~~~~~~s~dg~~i~~~~~~~~ 436 (776)
.|.+. +..++.....+ ....|.+|+..+++. .++.. +...+.....|+|||+.|+ .+. ++
T Consensus 351 ~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~la-sg~-d~ 421 (435)
T 4e54_B 351 AWHPR-------YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLA-SAM-GY 421 (435)
T ss_dssp EECSS-------SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEE-EEC-SS
T ss_pred EEcCC-------CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEE-EEc-CC
Confidence 12221 11122211111 123689999877654 34443 3334555556999999654 343 32
Q ss_pred CceeeEEEEE
Q 004067 437 PLESHLYCAK 446 (776)
Q Consensus 437 ~~~~~l~~~~ 446 (776)
.+.||.+.
T Consensus 422 --~i~iW~~~ 429 (435)
T 4e54_B 422 --HILIWSQQ 429 (435)
T ss_dssp --EEEECCCC
T ss_pred --cEEEEECC
Confidence 36777665
No 305
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.55 E-value=6.6e-13 Score=139.95 Aligned_cols=291 Identities=12% Similarity=0.100 Sum_probs=178.0
Q ss_pred CCceeEcCC---CCEEEEEeCCCCcCcceEEEEecCCCce-EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 57 PTSIGFSPD---DNLITYLLSPDHSLSRKVFSFDPKTCKQ-ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 57 ~~~~~~SpD---G~~ia~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
+..++|||+ |+.+.+....+ ..|.+|++.+++. +.+..+... .+...+....|
T Consensus 21 v~~i~~~p~~~~~~~~~~~~~~~----~~v~vw~~~~~~~~~~~~~~~~~-------------------~~~~~v~~~~~ 77 (366)
T 3k26_A 21 LFGVQFNWHSKEGDPLVFATVGS----NRVTLYECHSQGEIRLLQSYVDA-------------------DADENFYTCAW 77 (366)
T ss_dssp EEEEEECTTCCTTSCEEEEEEET----TEEEEEEECGGGCEEEEEEEECS-------------------CTTCCEEEEEE
T ss_pred eEEEEEecccCCCCceEEEECCC----CEEEEEEcCCCcEEEeeeecccc-------------------CCCCcEEEEEe
Confidence 478999985 66555555433 3699999987654 333321110 01246889999
Q ss_pred eecCCC----ceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCC-CCCEEEEEEC-CcEEEEecCCCceeEE
Q 004067 133 VKTSSK----KKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSS-DGTMIAFVRD-CELHVLNLLINEQRQL 205 (776)
Q Consensus 133 sp~~~d----g~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~Sp-Dg~~la~~~~-~~l~~~~l~~g~~~~l 205 (776)
+| + |+.|+.. .++.|.+||+.+++....+.... ..+..+.|+| |++.|+.... +.|.+|++.+++....
T Consensus 78 ~~---~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 78 TY---DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG-NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp EE---CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC-SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cc---CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC-CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE
Confidence 99 8 6677765 77889999999888764454333 3588899999 8998888774 5799999998876554
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
...-.. . ...+..+.|+|||+.|+....+ .
T Consensus 154 ~~~~~~------~--------~~~v~~~~~~~~~~~l~~~~~d------------------------------------g 183 (366)
T 3k26_A 154 FGGVEG------H--------RDEVLSADYDLLGEKIMSCGMD------------------------------------H 183 (366)
T ss_dssp ECSTTS------C--------SSCEEEEEECTTSSEEEEEETT------------------------------------S
T ss_pred eccccc------c--------cCceeEEEECCCCCEEEEecCC------------------------------------C
Confidence 321000 0 0114578999999998876643 2
Q ss_pred EEEEEEcCCCceEEE-Ec----cc------------CCC---CCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEE
Q 004067 286 RLGVVSAAGGPVSWM-DL----QC------------GGT---DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFD 345 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l-~~----~~------------~~~---~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d 345 (776)
.|.+||+.+++.... .. .. ..+ ....+...+..++|+ ++.++... .+..|.+||
T Consensus 184 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~----~d~~i~~wd 257 (366)
T 3k26_A 184 SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKS----CENAIVCWK 257 (366)
T ss_dssp CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEEC----SSSEEEEEE
T ss_pred CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEe----cCCEEEEEe
Confidence 367777776542210 00 00 000 012255667888998 55565554 355699999
Q ss_pred CCCCce------------EEEEEe---ccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCcee----
Q 004067 346 IKTGQR------------KVILVE---ELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCL---- 405 (776)
Q Consensus 346 ~~~g~~------------~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~---- 405 (776)
+.++.. ..+... ....+. -.|+| +. +.++++...+| .|++|++.+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~s~-------~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 258 PGKMEDDIDKIKPSESNVTILGRFDYSQCDIWY---MRFSM-------DFWQKMLALGNQVG--KLYVWDLEVEDPHKAK 325 (366)
T ss_dssp ESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSC---CCCEE-------CTTSSEEEEECTTS--CEEEEECCSSSGGGCE
T ss_pred CCCccccccccccCCcchheeccccccCCcEEE---EEEcC-------CCCCcEEEEEecCC--cEEEEECCCCCCcccc
Confidence 877643 222221 111110 11222 21 45667776777 899999887643
Q ss_pred -eccccC--CeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 406 -GPITEG--DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 406 -~~lt~~--~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
..+..+ ...+..+. |+++|+.|+..+ .++ .+.+|.+.
T Consensus 326 ~~~~~~~~~~~~v~~~~-~s~~~~~l~s~~-~dg--~i~iwd~~ 365 (366)
T 3k26_A 326 CTTLTHHKCGAAIRQTS-FSRDSSILIAVC-DDA--SIWRWDRL 365 (366)
T ss_dssp EEEECCTTCCSCEEEEE-ECTTSSEEEEEE-TTS--EEEEEEC-
T ss_pred ceEEcccccCCceEEEE-eCCCCCeEEEEe-CCC--EEEEEEec
Confidence 245544 34566654 999999766554 333 37777653
No 306
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.55 E-value=3.5e-12 Score=150.32 Aligned_cols=213 Identities=9% Similarity=0.085 Sum_probs=140.0
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++||.-+.+ ..|++|+..+++......+ ...+....|+|
T Consensus 20 V~~lafspdg~~lAsgs~D-----g~I~lw~~~~~~~~~~~~~------------------------~~~V~~l~fsp-- 68 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVT-----GEVHIYGQQQVEVVIKLED------------------------RSAIKEMRFVK-- 68 (902)
T ss_dssp EEEEEEETTTTEEEEEETT-----SEEEEECSTTCEEEEECSS------------------------CCCEEEEEEET--
T ss_pred cEEEEECCCCCEEEEEeCC-----CEEEEEeCCCcEEEEEcCC------------------------CCCEEEEEEcC--
Confidence 4789999999999965542 4699999987765443322 13688999998
Q ss_pred CCceEEEE-eCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCC--
Q 004067 137 SKKKIIMV-PLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGN-- 212 (776)
Q Consensus 137 ~dg~~l~~-~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~-- 212 (776)
|++|+. ..++.|.+||+.+++....+.. . ..+..+.|+|||+.|+.... +.|.+||+.+++...........
T Consensus 69 --g~~L~S~s~D~~v~lWd~~~~~~~~~~~~-~-~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~ 144 (902)
T 2oaj_A 69 --GIYLVVINAKDTVYVLSLYSQKVLTTVFV-P-GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSS 144 (902)
T ss_dssp --TTEEEEEETTCEEEEEETTTCSEEEEEEC-S-SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHH
T ss_pred --CCEEEEEECcCeEEEEECCCCcEEEEEcC-C-CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccc
Confidence 555554 4788999999998876534442 2 24788999999999988764 57999999988754322100000
Q ss_pred ceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEc
Q 004067 213 TVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 292 (776)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~ 292 (776)
... ......+..++|+|++..++...... ..+ +||+
T Consensus 145 ~~~--------~~h~~~V~sl~~sp~~~~~l~~g~~d-----------------------------------g~v-lWd~ 180 (902)
T 2oaj_A 145 FFP--------AARLSPIVSIQWNPRDIGTVLISYEY-----------------------------------VTL-TYSL 180 (902)
T ss_dssp TCS--------SSCCCCCCEEEEETTEEEEEEEECSS-----------------------------------CEE-EEET
T ss_pred ccc--------ccCCCCeEEEEEccCCCCEEEEEeCC-----------------------------------CcE-EEEC
Confidence 000 11123366899999754333333221 347 9999
Q ss_pred CCCceEEEEccc---CCCC-------CCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE
Q 004067 293 AGGPVSWMDLQC---GGTD-------QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 352 (776)
Q Consensus 293 ~~~~~~~l~~~~---~~~~-------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~ 352 (776)
.+++....-... +.+. ...+...+..++|+|||++|+..+ .+..|.+||+.+|+..
T Consensus 181 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs----~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 181 VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH----EDNSLVFWDANSGHMI 246 (902)
T ss_dssp TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE----TTCCEEEEETTTCCEE
T ss_pred CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE----CCCeEEEEECCCCcEE
Confidence 988754432110 0000 011235689999999999887776 4556999999887653
No 307
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.55 E-value=1.8e-12 Score=137.00 Aligned_cols=242 Identities=13% Similarity=0.068 Sum_probs=157.0
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCc--cceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSK--PELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLIN 200 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~--~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g 200 (776)
..+....|+| ||+.|++. .++.|++||+.+++ ....+..... .+..+.|+|||+.|+.... +.|.+|++.++
T Consensus 9 ~~i~~~~~s~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 9 EPISCHAWNK---DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCCCEEEECT---TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS-CEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred CCeEEEEECC---CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCC-cccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 4688999999 99999988 78899999999986 3325544433 4888999999999998875 57999999988
Q ss_pred ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 201 EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 201 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
+.......... ...+..+.|+|||+.|+....+
T Consensus 85 ~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~d-------------------------------- 117 (372)
T 1k8k_C 85 TWKPTLVILRI---------------NRAARCVRWAPNEKKFAVGSGS-------------------------------- 117 (372)
T ss_dssp EEEEEEECCCC---------------SSCEEEEEECTTSSEEEEEETT--------------------------------
T ss_pred eeeeeEEeecC---------------CCceeEEEECCCCCEEEEEeCC--------------------------------
Confidence 75443221110 0114578899999998877643
Q ss_pred CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECC-------------
Q 004067 281 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK------------- 347 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~------------- 347 (776)
..|.+||+++++...+.... ...+...+..+.|+||++.++... .+..|++||+.
T Consensus 118 ----~~v~i~d~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~~~~~~~~~~ 185 (372)
T 1k8k_C 118 ----RVISICYFEQENDWWVCKHI----KKPIRSTVLSLDWHPNSVLLAAGS----CDFKCRIFSAYIKEVEERPAPTPW 185 (372)
T ss_dssp ----SSEEEEEEETTTTEEEEEEE----CTTCCSCEEEEEECTTSSEEEEEE----TTSCEEEEECCCTTTSCCCCCBTT
T ss_pred ----CEEEEEEecCCCcceeeeee----ecccCCCeeEEEEcCCCCEEEEEc----CCCCEEEEEccccccccccccccc
Confidence 23678888776621110000 134566789999999999777665 34568899954
Q ss_pred -----CCceEEEE-EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEe
Q 004067 348 -----TGQRKVIL-VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVG 420 (776)
Q Consensus 348 -----~g~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~ 420 (776)
++...... .+...... -.|+| ++.++++...+| .|.+|++..++ ...+..+...+..+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~---~~~~~--------~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~- 251 (372)
T 1k8k_C 186 GSKMPFGELMFESSSSCGWVHG---VCFSA--------NGSRVAWVSHDS--TVCLADADKKMAVATLASETLPLLAVT- 251 (372)
T ss_dssp BSCCCTTCEEEECCCCSSCEEE---EEECS--------SSSEEEEEETTT--EEEEEEGGGTTEEEEEECSSCCEEEEE-
T ss_pred ccccchhhheEecCCCCCeEEE---EEECC--------CCCEEEEEeCCC--EEEEEECCCCceeEEEccCCCCeEEEE-
Confidence 34433222 22211111 11222 233666666677 89999986554 455555555566654
Q ss_pred ecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 421 VNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 421 ~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
|+++|+.++ .+ .++ .+.+|.+..
T Consensus 252 ~~~~~~~l~-~~-~d~--~i~i~~~~~ 274 (372)
T 1k8k_C 252 FITESSLVA-AG-HDC--FPVLFTYDS 274 (372)
T ss_dssp EEETTEEEE-EE-TTS--SCEEEEEET
T ss_pred EecCCCEEE-EE-eCC--eEEEEEccC
Confidence 999998544 33 333 378888873
No 308
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.55 E-value=1.3e-12 Score=140.03 Aligned_cols=303 Identities=10% Similarity=0.105 Sum_probs=179.3
Q ss_pred CCceeEcC-CCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 57 PTSIGFSP-DDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 57 ~~~~~~Sp-DG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
+..++||| ||++|+..+.+ ..|.+|++.+++.......... ..+... ....+...+....|+|
T Consensus 46 v~~~~~s~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~----~~~~~~------~~~~~~~~v~~~~~~~- 109 (408)
T 4a11_B 46 INTLDIEPVEGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAV----CSIGRD------HPDVHRYSVETVQWYP- 109 (408)
T ss_dssp EEEEEECTTTCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEE----EEECTT------CTTCCSSCEEEEEECT-
T ss_pred EEEEEEecCCCCEEEEEcCC-----CeEEEEECCCCcccceEecccc----cccccc------ccccCCCcEEEEEEcc-
Confidence 47899999 99999976552 3699999998764332210000 000000 0000124688999998
Q ss_pred CCCce-EEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCC---CCEEEEEEC-CcEEEEecCCCceeEEeeCC
Q 004067 136 SSKKK-IIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSD---GTMIAFVRD-CELHVLNLLINEQRQLTHGA 209 (776)
Q Consensus 136 ~~dg~-~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpD---g~~la~~~~-~~l~~~~l~~g~~~~lt~~~ 209 (776)
++. .|+.. .++.|.+||+.+++....+. ... .+....|+|+ +..++.... +.|++|++.+++........
T Consensus 110 --~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 185 (408)
T 4a11_B 110 --HDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEE-TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 185 (408)
T ss_dssp --TCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSS-CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCC
T ss_pred --CCCcEEEEEeCCCeEEEeeCCCCccceecc-CCC-ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCC
Confidence 665 44443 68899999999988773333 222 3667788884 447777664 57999999988654433222
Q ss_pred CCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEE
Q 004067 210 NGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 289 (776)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~ 289 (776)
.. .+..+.|+||++.+++..... ..|.+
T Consensus 186 ~~-----------------~v~~~~~~~~~~~ll~~~~~d-----------------------------------g~i~i 213 (408)
T 4a11_B 186 RQ-----------------EILAVSWSPRYDYILATASAD-----------------------------------SRVKL 213 (408)
T ss_dssp CS-----------------CEEEEEECSSCTTEEEEEETT-----------------------------------SCEEE
T ss_pred CC-----------------cEEEEEECCCCCcEEEEEcCC-----------------------------------CcEEE
Confidence 11 145788999999755444322 23688
Q ss_pred EEcCCCceEEEEcc--cCC------CCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCc
Q 004067 290 VSAAGGPVSWMDLQ--CGG------TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS 361 (776)
Q Consensus 290 ~d~~~~~~~~l~~~--~~~------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~ 361 (776)
||+.+++....... .+. .....+...+..++|+|||+.++... .+..|.+||+.+++...........
T Consensus 214 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~vwd~~~~~~~~~~~~~~~~ 289 (408)
T 4a11_B 214 WDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG----TDNRMRLWNSSNGENTLVNYGKVCN 289 (408)
T ss_dssp EETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCCBCCCCCCCCCC
T ss_pred EECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec----CCCeEEEEECCCCccceeccccccc
Confidence 88876642222111 000 01235667789999999999887765 3446999999988754332211100
Q ss_pred eeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCce
Q 004067 362 WVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 439 (776)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~ 439 (776)
-......+.. .... ..+++. ..++ .|++|++.+++ ...+..+...+..+. |+++|+.|+.. +.++.
T Consensus 290 ~~~~~~~~~~-----~~~~~~~~~~~-~~~~--~i~v~d~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~s~-~~dg~-- 357 (408)
T 4a11_B 290 NSKKGLKFTV-----SCGCSSEFVFV-PYGS--TIAVYTVYSGEQITMLKGHYKTVDCCV-FQSNFQELYSG-SRDCN-- 357 (408)
T ss_dssp CCSSCCCCEE-----CCSSSSCEEEE-EETT--EEEEEETTTCCEEEEECCCSSCEEEEE-EETTTTEEEEE-ETTSC--
T ss_pred cccccceeEE-----ecCCCceEEEE-ecCC--EEEEEECcCCcceeeeccCCCeEEEEE-EcCCCCEEEEE-CCCCe--
Confidence 0000000100 1112 234444 3445 89999987665 445555556666654 99999976544 44443
Q ss_pred eeEEEEEe
Q 004067 440 SHLYCAKL 447 (776)
Q Consensus 440 ~~l~~~~~ 447 (776)
+.+|.+..
T Consensus 358 i~iw~~~~ 365 (408)
T 4a11_B 358 ILAWVPSL 365 (408)
T ss_dssp EEEEEECC
T ss_pred EEEEeCCC
Confidence 78888874
No 309
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.54 E-value=5.1e-12 Score=136.18 Aligned_cols=282 Identities=13% Similarity=0.172 Sum_probs=181.5
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
+-+.||+++ .||... ...|++||+.+|+..++..... +...|.++.|+|
T Consensus 109 ~~l~wS~~n-~lAvgl------d~tV~lWd~~tg~~~~~~~~~~---------------------~~~~V~sv~fsp--- 157 (420)
T 4gga_A 109 NLVDWSSGN-VLAVAL------DNSVYLWSASSGDILQLLQMEQ---------------------PGEYISSVAWIK--- 157 (420)
T ss_dssp BCEEECTTS-EEEEEE------TTEEEEEETTTCCEEEEEECCS---------------------TTCCEEEEEECT---
T ss_pred eeEEECCCC-EEEEEe------CCEEEEEECCCCCEEEEEEecC---------------------CCCcEEEEEECC---
Confidence 457999875 677433 2469999999999876654211 123588999999
Q ss_pred CceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCcee
Q 004067 138 KKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTVT 215 (776)
Q Consensus 138 dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~~ 215 (776)
||++|+.. .++.|.+||+.+++....+..+. .....+++|++.|+..+. ..+++++.........+..+..
T Consensus 158 dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~---~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~---- 230 (420)
T 4gga_A 158 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHS---ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS---- 230 (420)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCS---SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS----
T ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCC---CceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccc----
Confidence 99999976 78899999999988763444332 233456678888877765 4688888876554333222211
Q ss_pred cCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCC
Q 004067 216 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG 295 (776)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 295 (776)
..+..+.|+|+|+.++....+ ..+.+|+..++
T Consensus 231 ------------~~~~~~~~~~~g~~l~s~~~D------------------------------------~~v~i~~~~~~ 262 (420)
T 4gga_A 231 ------------QEVCGLRWAPDGRHLASGGND------------------------------------NLVNVWPSAPG 262 (420)
T ss_dssp ------------SCEEEEEECTTSSEEEEEETT------------------------------------SCEEEEESSCC
T ss_pred ------------cceeeeeecCCCCeeeeeecc------------------------------------ccceEEeeccc
Confidence 013467899999998876643 23688888776
Q ss_pred ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCC
Q 004067 296 PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKG 375 (776)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (776)
+....... ....+...+..++|+|++..++.... +..+..|.+||+.++.............. ..|.+
T Consensus 263 ~~~~~~~~----~~~~~~~~V~~~~~~p~~~~~la~~~-gs~D~~I~iwd~~t~~~~~~~~~~~~v~~---~~~~~---- 330 (420)
T 4gga_A 263 EGGWVPLQ----TFTQHQGAVKAVAWCPWQSNVLATGG-GTSDRHIRIWNVCSGACLSAVDAHSQVCS---ILWSP---- 330 (420)
T ss_dssp SSCSCCSE----EECCCSSCEEEEEECTTCTTEEEEEE-CTTTCEEEEEETTTTEEEEEEECSSCEEE---EEEET----
T ss_pred cccceeee----eecccCCceeeeeeCCCcccEEEEEe-ecCCCEEEEEeCCccccceeeccccceee---eeecC----
Confidence 53211000 01455677889999998874433322 23456799999999987655544332111 11222
Q ss_pred ccccCCeEEEEec-cCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 376 VTKYSGGFIWASE-KTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 376 ~~~~~~~~~~~s~-~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
+++.++..+. .+| .|++|+..+++ ...|..+...|..+. |+|||++|+ ++..++. +.||++.
T Consensus 331 ---~~~~lv~~sg~~d~--~I~iwd~~~~~~v~~l~gH~~~V~~l~-~spdg~~l~-S~s~D~t--vriWdv~ 394 (420)
T 4gga_A 331 ---HYKELISGHGFAQN--QLVIWKYPTMAKVAELKGHTSRVLSLT-MSPDGATVA-SAAADET--LRLWRCF 394 (420)
T ss_dssp ---TTTEEEEEECTTTC--CEEEEETTTCCEEEEECCCSSCEEEEE-ECTTSSCEE-EEETTTE--EEEECCS
T ss_pred ---CCCeEEEEEecCCC--EEEEEECCCCcEEEEEcCCCCCEEEEE-EcCCCCEEE-EEecCCe--EEEEECC
Confidence 2333444432 344 89999976654 566777777777765 999999654 4555543 7888775
No 310
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.54 E-value=2e-12 Score=133.27 Aligned_cols=279 Identities=9% Similarity=0.036 Sum_probs=176.1
Q ss_pred eeEEEeecCCCceEEEEeCCCcEEEEeCCCCccceecCC-CCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEE
Q 004067 128 TRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSS-SSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQL 205 (776)
Q Consensus 128 ~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~l 205 (776)
+...||+ ++ .|++..++.|++||+++++....++. .....+..+.|+|||+.|+..+. +.|.+|++.+++..+.
T Consensus 29 ~~l~WS~---~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 29 NLVDWSS---GN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp BCEEECT---TS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eEEEECC---CC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 4578999 87 78888999999999999987633332 22234778999999999988775 5799999999876554
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
..... .....++++++.|+....+ .
T Consensus 105 ~~~h~-------------------~~~~~~~~~~~~l~s~~~~------------------------------------~ 129 (318)
T 4ggc_A 105 MTSHS-------------------ARVGSLSWNSYILSSGSRS------------------------------------G 129 (318)
T ss_dssp EECCS-------------------SCEEEEEEETTEEEEEETT------------------------------------S
T ss_pred ecCcc-------------------ceEEEeecCCCEEEEEecC------------------------------------C
Confidence 33322 1134467778877655432 2
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEE--EEE---eccC
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV--ILV---EELD 360 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~--l~~---~~~~ 360 (776)
.+.+++..++....... ..+...+....|+++|+.++... .+..|.+||+.+++... +.. ....
T Consensus 130 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~s~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 198 (318)
T 4ggc_A 130 HIHHHDVRVAEHHVATL-------SGHSQEVCGLRWAPDGRHLASGG----NDNLVNVWPSAPGEGGWVPLQTFTQHQGA 198 (318)
T ss_dssp EEEEEETTSSSCEEEEE-------ECCSSCEEEEEECTTSSEEEEEE----TTSCEEEEESSCBTTBSCCSEEECCCCSC
T ss_pred ceEeeecCCCceeEEEE-------cCccCceEEEEEcCCCCEEEEEe----cCcceeEEECCCCcccccceeeecccCCc
Confidence 35666666554433322 35566788899999999877665 34568999998765321 111 1111
Q ss_pred ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCcee
Q 004067 361 SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 440 (776)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~ 440 (776)
... ..+.+ .+..++..........|.+|+...............+.... ++++++.++..+.... ..+
T Consensus 199 v~~---~~~~~-------~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~sg~~d-~~i 266 (318)
T 4ggc_A 199 VKA---VAWCP-------WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSIL-WSPHYKELISGHGFAQ-NQL 266 (318)
T ss_dssp EEE---EEECT-------TSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEE-EETTTTEEEEEECTTT-CCE
T ss_pred eEE---EEecC-------CCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeee-ecccccceEEEEEcCC-CEE
Confidence 110 01111 23334444433334489999988776555544444455444 8899998777664322 236
Q ss_pred eEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCC
Q 004067 441 HLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 499 (776)
Q Consensus 441 ~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~ 499 (776)
.+|.+. .+. .+..+..+. .+..++|+|||+.|+... .+ ..|.+|++.+
T Consensus 267 ~iwd~~---~~~----~~~~l~gH~~~V~~l~~spdg~~l~S~s-~D---~~v~iWd~~~ 315 (318)
T 4ggc_A 267 VIWKYP---TMA----KVAELKGHTSRVLSLTMSPDGATVASAA-AD---ETLRLWRCFE 315 (318)
T ss_dssp EEEETT---TCC----EEEEECCCSSCEEEEEECTTSSCEEEEE-TT---TEEEEECCSC
T ss_pred EEEECC---CCc----EEEEEcCCCCCEEEEEEcCCCCEEEEEe-cC---CeEEEEECCC
Confidence 666554 343 566676654 467889999999887553 32 3588888744
No 311
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.54 E-value=5.1e-14 Score=150.94 Aligned_cols=244 Identities=12% Similarity=0.052 Sum_probs=159.1
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++||-.+.. ..|.+|+.++ ....+. +.. .++ ...+.+++|||
T Consensus 88 V~~vawSPdG~~LAs~s~d-----g~V~iwd~~~-~l~~l~-~~~------~~~-------------~~sv~svafSP-- 139 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNN-----GNVSVFKDNK-MLTNLD-SKG------NLS-------------SRTYHCFEWNP-- 139 (588)
T ss_dssp EEEEEECSSSSCEEEEETT-----SCEEEEETTE-EEEECC-CSS------CST-------------TTCEEEEEECS--
T ss_pred EEEEEECCCCCEEEEEeCC-----CcEEEEeCCc-eeeecc-CCC------ccc-------------cccEEEEEEcC--
Confidence 5899999999999976653 3599999654 222222 111 000 12588999999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCcc-------ceecC---CCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCcee--
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKP-------ELKLS---SSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINEQR-- 203 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~-------~~~l~---~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~~~-- 203 (776)
||+.|+.. .++.|.+||+.++.. ...+. .+....+...+||||| .++...++.+++|+++++...
T Consensus 140 -DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~ 217 (588)
T 2j04_A 140 -IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPV 217 (588)
T ss_dssp -SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCC
T ss_pred -CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccc
Confidence 99999987 689999999999864 11332 1122358889999999 555555678999999988743
Q ss_pred --EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 204 --QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 204 --~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
.+...... .+.+++|+ |+.|+... +
T Consensus 218 ~~tL~~~h~~-----------------~V~svaFs--g~~LASa~-~--------------------------------- 244 (588)
T 2j04_A 218 SRMIQNASRR-----------------KITDLKIV--DYKVVLTC-P--------------------------------- 244 (588)
T ss_dssp EEEEECCCSS-----------------CCCCEEEE--TTEEEEEC-S---------------------------------
T ss_pred eeeecccccC-----------------cEEEEEEE--CCEEEEEe-C---------------------------------
Confidence 23211110 15578899 67777654 1
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEe--ccCCeEEEEEEeecCceE-EEEEEECCCCceEEEEEec
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNW--MHGNILTAQVLNRSQTKL-KVLKFDIKTGQRKVILVEE 358 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--SpDg~~l~~~~~~~~~~~-~l~~~d~~~g~~~~l~~~~ 358 (776)
..|++||+++++...+. .++...+..++| ||||+.++.+. .++ .||..| . +.
T Consensus 245 ---~tIkLWd~~~~~~~~~~--------~gh~~~V~~va~~~s~d~~~La~a~----edG~klw~~d----~---~~--- 299 (588)
T 2j04_A 245 ---GYVHKIDLKNYSISSLK--------TGSLENFHIIPLNHEKESTILLMSN----KTSYKVLLED----E---LH--- 299 (588)
T ss_dssp ---SEEEEEETTTTEEEEEE--------CSCCSCCCEEEETTCSSCEEEEECS----SCEEEEEESS----S---EE---
T ss_pred ---CeEEEEECCCCeEEEEE--------cCCCceEEEEEeeeCCCCCEEEEEc----CCCCEEEeec----c---EE---
Confidence 35899999999886553 357778888999 99998776654 223 355544 1 11
Q ss_pred cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEE
Q 004067 359 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTG 432 (776)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~ 432 (776)
|+| ++.+.... ...+++|+..++....+.. .+.+.+.. +||||+.++..+
T Consensus 300 ----------~sp--------d~~l~a~~----d~~v~lW~~~g~~l~~~~~-~~~I~~va-~SPdG~~lA~~~ 349 (588)
T 2j04_A 300 ----------VTA--------DNIIAPYL----EKKFKKWSTIWNEFNNYET-TLVIHGIS-LSPDGYSIAIVY 349 (588)
T ss_dssp ----------EEC--------CCSSHHHH----HHHHHHTTTTTTSSSSSCC-EEEEEEEE-ECTTSSEEEEEE
T ss_pred ----------ECC--------CceEEEEc----CCEEEEEECCCCceeeecc-ceEEEEEE-ECCCCCEEEEEE
Confidence 112 11111111 2367788888877665544 55566654 999999766554
No 312
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.54 E-value=1.8e-12 Score=138.86 Aligned_cols=284 Identities=12% Similarity=0.053 Sum_probs=171.9
Q ss_pred eEEEeecCCCceEEEEe--CCCcEEEEeCCCCcc----ceecCCCCCCCccCceeCC-CCCEEEEEEC-CcEEEEecCCC
Q 004067 129 RYEWVKTSSKKKIIMVP--LPDGIYFQDLSCSKP----ELKLSSSSCSPVIDPHLSS-DGTMIAFVRD-CELHVLNLLIN 200 (776)
Q Consensus 129 ~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~~----~~~l~~~~~~~~~~~~~Sp-Dg~~la~~~~-~~l~~~~l~~g 200 (776)
...++| +...+++. .++.|++|++..... ...+..+. ..+..+.|+| |++.|+..+. +.|.+|++.++
T Consensus 39 ~~~~~~---~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 39 FCAVNP---KFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHT-APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SEEECS---SEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCS-SCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred cEEECC---CeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCC-CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 456777 77666653 578999999965421 11233333 3488899999 8998888875 57999999887
Q ss_pred ce--------eEEeeCCCCCceecCCcccceecccCCcceEEECCCCC-eEEEEEecCCCCCeEEEeecCCCCCCCCCcc
Q 004067 201 EQ--------RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSK-FIAFTQVDSSEIPRFRIMHQGKSSVGSEAQE 271 (776)
Q Consensus 201 ~~--------~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (776)
.. ..+.... ..+..+.|+|||+ .|+..+.+
T Consensus 115 ~~~~~~~~~~~~~~~h~------------------~~v~~~~~~p~~~~~l~s~~~d----------------------- 153 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHT------------------KRVGIVAWHPTAQNVLLSAGCD----------------------- 153 (402)
T ss_dssp CCSSCBCSCSEEEECCS------------------SCEEEEEECSSBTTEEEEEETT-----------------------
T ss_pred CCccccCCceEEecCCC------------------CeEEEEEECcCCCCEEEEEcCC-----------------------
Confidence 32 2222111 1255789999995 55544422
Q ss_pred eecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce
Q 004067 272 DHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 351 (776)
Q Consensus 272 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~ 351 (776)
..|.+||+.+++....-.. ..+...+..++|+|||+.|+..+ .+..|.+||+.+++.
T Consensus 154 -------------g~i~iwd~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 154 -------------NVILVWDVGTGAAVLTLGP------DVHPDTIYSVDWSRDGALICTSC----RDKRVRVIEPRKGTV 210 (402)
T ss_dssp -------------SCEEEEETTTTEEEEEECT------TTCCSCEEEEEECTTSSCEEEEE----TTSEEEEEETTTTEE
T ss_pred -------------CEEEEEECCCCCccEEEec------CCCCCceEEEEECCCCCEEEEEe----cCCcEEEEeCCCCce
Confidence 2479999998876543210 23566789999999999777765 455799999998876
Q ss_pred EEEEE-eccCceeecccccccCCCCccccCCeEEEEe-ccCCceEEEEEeCCCcee-e-ccc-cCCeEEEEEEeecCCCc
Q 004067 352 KVILV-EELDSWVNLHDCFTPLDKGVTKYSGGFIWAS-EKTGFRHLYLHDINGTCL-G-PIT-EGDWMVEQIVGVNEASG 426 (776)
Q Consensus 352 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~g~~~l~~~~~~g~~~-~-~lt-~~~~~~~~~~~~s~dg~ 426 (776)
..... ...... ...-.|.| ++.++++. .......|++||+.+++. . ... .+...+..+ .|+++|+
T Consensus 211 ~~~~~~~~~~~~-~~~~~~~~--------~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~ 280 (402)
T 2aq5_A 211 VAEKDRPHEGTR-PVHAVFVS--------EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLP-FFDPDTN 280 (402)
T ss_dssp EEEEECSSCSSS-CCEEEECS--------TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE-EEETTTT
T ss_pred eeeeccCCCCCc-ceEEEEcC--------CCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEE-EEcCCCC
Confidence 54432 111100 00011222 23345444 112334999999876542 1 111 122234444 4999999
Q ss_pred EEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCc
Q 004067 427 QVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 501 (776)
Q Consensus 427 ~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~ 501 (776)
.+++.+..++. +.+|.+.. +......+..+.....+..+.|+||+..++. . . ..+.++++.++.
T Consensus 281 ~l~~~g~~dg~--i~i~d~~~---~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s---~-~--~~~~~~~l~~~~ 344 (402)
T 2aq5_A 281 IVYLCGKGDSS--IRYFEITS---EAPFLHYLSMFSSKESQRGMGYMPKRGLEVN---K-C--EIARFYKLHERK 344 (402)
T ss_dssp EEEEEETTCSC--EEEEEECS---STTCEEEEEEECCSSCCSEEEECCGGGSCGG---G-T--EEEEEEEEETTE
T ss_pred EEEEEEcCCCe--EEEEEecC---CCcceEeecccccCCcccceEEeccccccee---c-c--eeEEEEEcCCCc
Confidence 88888766553 77887763 3211112233333345678899999987653 2 1 156777776654
No 313
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.53 E-value=2.3e-12 Score=134.80 Aligned_cols=262 Identities=11% Similarity=0.016 Sum_probs=155.3
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
+.++++++++.++-... ..+|++||+++++......... ......+.|+|
T Consensus 3 ~g~~~~~~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~----------------------~~~~~~~~~s~--- 52 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPD----------------------KFGPGTAMMAP--- 52 (349)
T ss_dssp -CCCCCTTCEEEEEEET-----TTEEEEEETTTTEEEEEEECSS----------------------CCSSCEEEECT---
T ss_pred ccccccCCCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCC----------------------CCCCceeEECC---
Confidence 56778988886664433 2479999999988755443111 01456789999
Q ss_pred CceEEEEe--CCCcEEEEeCCCCccceecCCCC-----CCCccCceeCCCCCEEEEEE-------------CCcEEEEec
Q 004067 138 KKKIIMVP--LPDGIYFQDLSCSKPELKLSSSS-----CSPVIDPHLSSDGTMIAFVR-------------DCELHVLNL 197 (776)
Q Consensus 138 dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~-----~~~~~~~~~SpDg~~la~~~-------------~~~l~~~~l 197 (776)
||+++++. .++.|++||+.+++....+.... ......+.|||||+.|++.. .+.|+++++
T Consensus 53 dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 53 DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEEC
Confidence 99988776 46789999999887663333221 11256789999999998887 367999999
Q ss_pred CCCceeEE---eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 198 LINEQRQL---THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 198 ~~g~~~~l---t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
++++.... ...+. .+..++|+|||+ |+... . . ...+....... ...+.
T Consensus 133 ~~~~~~~~~~~~~~~~------------------~~~~~~~s~dg~-l~~~~-~--~--i~~~d~~~~~~-----~~~~~ 183 (349)
T 1jmx_B 133 ADGLEAKPVRTFPMPR------------------QVYLMRAADDGS-LYVAG-P--D--IYKMDVKTGKY-----TVALP 183 (349)
T ss_dssp GGGGGBCCSEEEECCS------------------SCCCEEECTTSC-EEEES-S--S--EEEECTTTCCE-----EEEEC
T ss_pred CCccccceeeeccCCC------------------cccceeECCCCc-EEEcc-C--c--EEEEeCCCCce-----ecccc
Confidence 98654321 11111 134678999999 55432 1 1 22221111110 00000
Q ss_pred -----------------CCCCCCCC----------------------CeEEEEEEEcCCCceEEEEcccCCCCCCCCcce
Q 004067 275 -----------------YPFAGASN----------------------VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEY 315 (776)
Q Consensus 275 -----------------~~~~g~~~----------------------~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 315 (776)
++...... ....+..++..+++...+... .....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 256 (349)
T 1jmx_B 184 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA-------DLTEL 256 (349)
T ss_dssp STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE-------ECSSC
T ss_pred ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc-------cCCCc
Confidence 00000000 112233478888888777653 23446
Q ss_pred EEEEEecc-CCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceE
Q 004067 316 LARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRH 394 (776)
Q Consensus 316 ~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~ 394 (776)
...+.||| ||+.++.. ...|++||+++++...........+. -.|++ ++ +.++++..++ .
T Consensus 257 ~~~~~~sp~dg~~l~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~---~~~s~-------dg-~~l~~~~~~~--~ 317 (349)
T 1jmx_B 257 YFTGLRSPKDPNQIYGV------LNRLAKYDLKQRKLIKAANLDHTYYC---VAFDK-------KG-DKLYLGGTFN--D 317 (349)
T ss_dssp EEEEEECSSCTTEEEEE------ESEEEEEETTTTEEEEEEECSSCCCE---EEECS-------SS-SCEEEESBSS--E
T ss_pred ceeeEecCCCCCEEEEE------cCeEEEEECccCeEEEEEcCCCCccc---eEECC-------CC-CEEEEecCCC--e
Confidence 77899999 99977665 33699999999887554432221111 11222 22 3444454444 8
Q ss_pred EEEEeCCCce
Q 004067 395 LYLHDINGTC 404 (776)
Q Consensus 395 l~~~~~~g~~ 404 (776)
|++||+++++
T Consensus 318 v~v~d~~~~~ 327 (349)
T 1jmx_B 318 LAVFNPDTLE 327 (349)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeccccc
Confidence 9999987765
No 314
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.53 E-value=6.3e-13 Score=146.12 Aligned_cols=323 Identities=10% Similarity=-0.008 Sum_probs=183.4
Q ss_pred cCCCceeEcCCC---------CEEEEEeCCC--------------CcCcceEEEEecCCCceE-----EeecCCCCCCCC
Q 004067 55 VAPTSIGFSPDD---------NLITYLLSPD--------------HSLSRKVFSFDPKTCKQE-----LVFSPPDGGLDE 106 (776)
Q Consensus 55 ~~~~~~~~SpDG---------~~ia~~~~~~--------------~~~~~~l~~~~~~~~~~~-----~l~~~~~~~~~~ 106 (776)
..+..++|+||+ ++||-..... +.....|.+|++++++.. .+..+
T Consensus 134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~------- 206 (524)
T 2j04_B 134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHS------- 206 (524)
T ss_dssp C--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEEC-------
T ss_pred CceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEec-------
Confidence 346899999998 7888654321 223457889999887642 12221
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeeEEEeec---CCCceEEEEe-CCCcEEEEeCCCCccc-----------eecCCCCCCC
Q 004067 107 NNISPEEKLRRERLRERGLGVTRYEWVKT---SSKKKIIMVP-LPDGIYFQDLSCSKPE-----------LKLSSSSCSP 171 (776)
Q Consensus 107 ~~i~~~~~~~~~~~~~~~~~~~~~~~sp~---~~dg~~l~~~-~~~~l~~~d~~~~~~~-----------~~l~~~~~~~ 171 (776)
...+....|+|. ++|++.|+.. .++.|.+||+.+++.. ..+.... ..
T Consensus 207 -----------------~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~-~~ 268 (524)
T 2j04_B 207 -----------------FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD-SL 268 (524)
T ss_dssp -----------------CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT-TC
T ss_pred -----------------CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC-CC
Confidence 135888999991 1125778754 7889999999876421 0222222 34
Q ss_pred ccCceeCCCCCEEEEEEC-CcEEEEecCCCcee-EEeeCCCCCceecCCcccceecccCCcceE--EECCCC-CeEEEEE
Q 004067 172 VIDPHLSSDGTMIAFVRD-CELHVLNLLINEQR-QLTHGANGNTVTHGLAEYIAQEEMDRKTGY--WWSLDS-KFIAFTQ 246 (776)
Q Consensus 172 ~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~-~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~--~wspDg-~~l~~~~ 246 (776)
+..+.|+|++ .|+..+. +.|.+||+.++... ........ .+..+ +|+||| +.|+..+
T Consensus 269 v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~-----------------~V~sv~~~~s~~g~~~laS~S 330 (524)
T 2j04_B 269 ITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS-----------------YILSVSTAYSDFEDTVVSTVA 330 (524)
T ss_dssp EEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSS-----------------CEEEEEEECCTTSCCEEEEEE
T ss_pred EEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccc-----------------cEEEEEEEcCCCCCeEEEEec
Confidence 7789999875 5666554 67999999977432 21111111 13455 589998 6677666
Q ss_pred ecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEE-EEcccCCCCCCCCcceEEEEEeccCC
Q 004067 247 VDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGN 325 (776)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~SpDg 325 (776)
.| ..|.+||+.+++... +.. ......+..++||||+
T Consensus 331 ~D------------------------------------~tvklWD~~~~~~~~~~~~-------~~~~~~v~~v~fsp~~ 367 (524)
T 2j04_B 331 VD------------------------------------GYFYIFNPKDIATTKTTVS-------RFRGSNLVPVVYCPQI 367 (524)
T ss_dssp TT------------------------------------SEEEEECGGGHHHHCEEEE-------ECSCCSCCCEEEETTT
T ss_pred cC------------------------------------CeEEEEECCCCCccccccc-------ccccCcccceEeCCCc
Confidence 43 358999998765322 211 0011125668999999
Q ss_pred eEEEEEEeecCceEEEEEEECCCCce-EEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce
Q 004067 326 ILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC 404 (776)
Q Consensus 326 ~~l~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~ 404 (776)
+.++... .+..|.+||+.++.. ..+..+....+.. .|+| ++.++++...+| .|.+|++.++.
T Consensus 368 ~~l~s~~----~d~tv~lwd~~~~~~~~~l~gH~~~V~sv---a~Sp--------~g~~l~Sgs~Dg--tv~lwd~~~~~ 430 (524)
T 2j04_B 368 YSYIYSD----GASSLRAVPSRAAFAVHPLVSRETTITAI---GVSR--------LHPMVLAGSADG--SLIITNAARRL 430 (524)
T ss_dssp TEEEEEC----SSSEEEEEETTCTTCCEEEEECSSCEEEE---ECCS--------SCCBCEEEETTT--EEECCBSCSST
T ss_pred CeEEEeC----CCCcEEEEECcccccceeeecCCCceEEE---EeCC--------CCCeEEEEECCC--EEEEEechHhh
Confidence 8765543 334699999988775 5566665554433 2444 233556666777 88889986643
Q ss_pred eeccccC-----CeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcC-
Q 004067 405 LGPITEG-----DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMR- 477 (776)
Q Consensus 405 ~~~lt~~-----~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~- 477 (776)
...+... ...+..+ .|+|+|+.+-+ .+. ..++.... .|. .+..|..+. .+..++|+||+.
T Consensus 431 ~~~~~~~~~~~~~~~v~~v-~~sp~g~~~~~---~~~---~~~~~~~~--~g~----~~~~l~gh~~~V~~Vafsp~~~~ 497 (524)
T 2j04_B 431 LHGIKNSSATQKSLRLWKW-DYSIKDDKYRI---DSS---YEVYPLTV--NDV----SKAKIDAHGINITCTKWNETSAG 497 (524)
T ss_dssp TTCC------CCCCEEEEC-BCCSSSCEEEE---CCC---CCCCC-------------------CCCSCCCEEECCSTTT
T ss_pred ccccccCccceeeeEEEEe-ccCCCCCeEEc---cCC---ceeccccc--CCc----ceeeecCCCceEEEEECCCCCCc
Confidence 2222111 1123333 48999984422 221 23333332 222 344555443 467899999965
Q ss_pred --EEEEEeeCCCCCCEEEEEEc
Q 004067 478 --NFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 478 --~l~~~~~~~~~~~~i~~~~~ 497 (776)
.++..... +.|.++++
T Consensus 498 ~~~lAsg~~~----g~vrlw~l 515 (524)
T 2j04_B 498 GKCYAFSNSA----GLLTLEYL 515 (524)
T ss_dssp TTEEEEECTT----SEEEEEEC
T ss_pred cHHHHhhccC----ceEEEEEc
Confidence 55554332 46888776
No 315
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.53 E-value=9.9e-12 Score=128.07 Aligned_cols=282 Identities=13% Similarity=0.171 Sum_probs=179.9
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
+-+.||||+ .||... ...|++||+++|+..++..... +...+....|+|
T Consensus 29 ~~l~WS~~~-~lAvg~------D~tV~iWd~~tg~~~~~~~~~~---------------------~~~~V~~v~~~~--- 77 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVAL------DNSVYLWSASSGDILQLLQMEQ---------------------PGEYISSVAWIK--- 77 (318)
T ss_dssp BCEEECTTS-EEEEEE------TTEEEEEETTTCCEEEEEECCS---------------------TTCCEEEEEECT---
T ss_pred eEEEECCCC-EEEEEe------CCEEEEEECCCCCEEEEEEecC---------------------CCCeEEEEEECC---
Confidence 457999997 677533 2469999999998766553211 123588999999
Q ss_pred CceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC-cEEEEecCCCceeEEeeCCCCCcee
Q 004067 138 KKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC-ELHVLNLLINEQRQLTHGANGNTVT 215 (776)
Q Consensus 138 dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~-~l~~~~l~~g~~~~lt~~~~~~~~~ 215 (776)
||++|+.. .++.|.+||+.+++....+.... .....++++++.++..... .+..++..++.....+..+..
T Consensus 78 ~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~---~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~---- 150 (318)
T 4ggc_A 78 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHS---ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS---- 150 (318)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCS---SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS----
T ss_pred CCCEEEEEECCCcEEEeecCCceeEEEecCcc---ceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCcc----
Confidence 99999876 78899999999998763443322 3345778888888877654 566777766544333322211
Q ss_pred cCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCC
Q 004067 216 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG 295 (776)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 295 (776)
.......|+++|+.|+....+ ..|.+||+.++
T Consensus 151 ------------~~~~~~~~~~~~~~l~s~~~d------------------------------------~~i~iwd~~~~ 182 (318)
T 4ggc_A 151 ------------QEVCGLRWAPDGRHLASGGND------------------------------------NLVNVWPSAPG 182 (318)
T ss_dssp ------------SCEEEEEECTTSSEEEEEETT------------------------------------SCEEEEESSCB
T ss_pred ------------CceEEEEEcCCCCEEEEEecC------------------------------------cceeEEECCCC
Confidence 013467799999988876543 23788999876
Q ss_pred ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCC
Q 004067 296 PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKG 375 (776)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (776)
+....... ........+..+.|+|++..++.... +.....|.+||..++.............. ..|.+
T Consensus 183 ~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~i~lwd~~~~~~~~~~~~~~~v~~---~~~~~---- 250 (318)
T 4ggc_A 183 EGGWVPLQ----TFTQHQGAVKAVAWCPWQSNVLATGG-GTSDRHIRIWNVCSGACLSAVDAHSQVCS---ILWSP---- 250 (318)
T ss_dssp TTBSCCSE----EECCCCSCEEEEEECTTSTTEEEEEE-CTTTCEEEEEETTTCCEEEEEECSSCEEE---EEEET----
T ss_pred ccccccee----eecccCCceEEEEecCCCCcEEEEEe-cCCCCEEEEEecccccccccccceeeeee---eeecc----
Confidence 53211000 01345567888999998874443322 22456799999988877665544333111 11222
Q ss_pred ccccCCeEEEEe-ccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 376 VTKYSGGFIWAS-EKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 376 ~~~~~~~~~~~s-~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
.++.++..+ ..++ .|++||+.+++ ...+..+...|..+. |+|||+.|+ +++.++. +.||++.
T Consensus 251 ---~~~~~~~~sg~~d~--~i~iwd~~~~~~~~~l~gH~~~V~~l~-~spdg~~l~-S~s~D~~--v~iWd~~ 314 (318)
T 4ggc_A 251 ---HYKELISGHGFAQN--QLVIWKYPTMAKVAELKGHTSRVLSLT-MSPDGATVA-SAAADET--LRLWRCF 314 (318)
T ss_dssp ---TTTEEEEEECTTTC--CEEEEETTTCCEEEEECCCSSCEEEEE-ECTTSSCEE-EEETTTE--EEEECCS
T ss_pred ---cccceEEEEEcCCC--EEEEEECCCCcEEEEEcCCCCCEEEEE-EcCCCCEEE-EEecCCe--EEEEECC
Confidence 233344443 2345 89999987654 556666666777765 999999654 5555543 7888763
No 316
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.52 E-value=2.8e-12 Score=136.13 Aligned_cols=292 Identities=11% Similarity=0.034 Sum_probs=177.0
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCce
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~ 202 (776)
..+....|+| ||++|+.. .++.|.+||+.+++....+..... .+...+|+|||+.|+.... +.+.+|++.++..
T Consensus 67 ~~V~~~~~sp---~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~-~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 67 GKVYSLDWTP---EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCP-WVMECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp SCEEEEEECT---TSSCEEEEETTSEEEEEETTTTEEEEEEECCCT-TCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred cEEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCccceEEecCCC-CEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 3688999999 99999876 788999999998876634544433 4788999999999888764 4688888875432
Q ss_pred eEEeeCCCCCceecCCcccceecccCCcceEEECCCCC-eEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 203 RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSK-FIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 203 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
..- .........+.. +.+..+.|+|++. .|+..+.|
T Consensus 143 ~~~--~~~~~~~~~gh~--------~~v~~~~~~~~~~~~l~s~s~D--------------------------------- 179 (380)
T 3iz6_a 143 RDG--NMPVSRVLTGHK--------GYASSCQYVPDQETRLITGSGD--------------------------------- 179 (380)
T ss_dssp CCC--SSTTCCBCCCCS--------SCCCCCBCCSSSSSCEEEECTT---------------------------------
T ss_pred ccC--CccceeeccCCC--------cceEEEEEecCCCCEEEEECCC---------------------------------
Confidence 100 000000111111 1244667899865 45544432
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc-CCeEEEEEEeecCceEEEEEEECCC-Cc-eEEEEEec
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKT-GQ-RKVILVEE 358 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~-g~-~~~l~~~~ 358 (776)
..|.+||+.+++....... .....+...+..+.|+| |++.++..+ .+..|.+||+.. +. .+.+..+.
T Consensus 180 ---~~i~~wd~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~l~sgs----~D~~v~~wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 180 ---QTCVLWDVTTGQRISIFGS---EFPSGHTADVLSLSINSLNANMFISGS----CDTTVRLWDLRITSRAVRTYHGHE 249 (380)
T ss_dssp ---SCEEEECTTTCCEEEEECC---CSSSSCCSCEEEEEECSSSCCEEEEEE----TTSCEEEEETTTTCCCCEEECCCS
T ss_pred ---CcEEEEEcCCCcEEEEeec---ccCCCCccCeEEEEeecCCCCEEEEEE----CCCeEEEEECCCCCcceEEECCcC
Confidence 3478999998876543211 00134566788899977 777776665 445699999973 33 33333333
Q ss_pred cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeecc-ccCC-------eEEEEEEeecCCCcEEEE
Q 004067 359 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPI-TEGD-------WMVEQIVGVNEASGQVYF 430 (776)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~l-t~~~-------~~~~~~~~~s~dg~~i~~ 430 (776)
...... .|+| ++..+++...+| .|.+||+.++...+. .... ..+..+ .|+++|+.++.
T Consensus 250 ~~v~~v---~~~p--------~~~~l~s~s~D~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~ 315 (380)
T 3iz6_a 250 GDINSV---KFFP--------DGQRFGTGSDDG--TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSV-AFSISGRLLFA 315 (380)
T ss_dssp SCCCEE---EECT--------TSSEEEEECSSS--CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEE-EECSSSSEEEE
T ss_pred CCeEEE---EEec--------CCCeEEEEcCCC--eEEEEECCCCcEEEEecccccccccccCceEEE-EECCCCCEEEE
Confidence 332211 1333 234566666777 899999887754332 2211 113343 49999997655
Q ss_pred EEccCCCceeeEEEEEeCCCCCCccccceee----cCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCc
Q 004067 431 TGTLDGPLESHLYCAKLYPDWNHTLEAPVKL----TNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 501 (776)
Q Consensus 431 ~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l----~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~ 501 (776)
. ..++. +.+|.+.. +. ....+ ..+. .+..+.|||||+.|+..... ..|.+|++..+.
T Consensus 316 g-~~dg~--i~vwd~~~---~~----~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D----~~i~iW~~~~~~ 377 (380)
T 3iz6_a 316 G-YSNGD--CYVWDTLL---AE----MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD----KNLKIWAFSGHR 377 (380)
T ss_dssp E-CTTSC--EEEEETTT---CC----EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT----SCEEEEECCSSS
T ss_pred E-ECCCC--EEEEECCC---Cc----eEEEEecccCCCCCceEEEEECCCCCEEEEeeCC----CCEEEEecCCCc
Confidence 4 33432 66776532 22 22333 2222 36688999999987765432 358888886553
No 317
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.52 E-value=1.1e-13 Score=141.85 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=132.3
Q ss_pred CCceEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh------CCcEEEEE
Q 004067 522 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS------KGILVWKL 594 (776)
Q Consensus 522 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~------~G~~v~~~ 594 (776)
.+.+.+++.+. -|....+++|.|+++....+++|+|+++||... |. ......+.+.. .+++||++
T Consensus 10 ~~v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~-------f~-~~~~~~~~l~~~~~~~~~~~IvV~i 81 (331)
T 3gff_A 10 VEYQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQ-------FD-HMASLLQFLSQGTMPQIPKVIIVGI 81 (331)
T ss_dssp -CEEEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHH-------HH-HHHHHHHHHTCSSSCSSCCCEEEEE
T ss_pred ceEEEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhh-------hH-HHHHHHHHHHhhhhcCCCCEEEEEE
Confidence 35677778775 478899999999986433478999999999421 11 11112344443 36889998
Q ss_pred CCCCCCCCchhhhh--------------hhhhccCCccHHHHH--HHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhh
Q 004067 595 DNRGTARRGLKFEA--------------SIKHNCGRIDAEDQL--TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 658 (776)
Q Consensus 595 d~rg~g~~~~~~~~--------------~~~~~~~~~~~~D~~--~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~ 658 (776)
+.. ....++.. ......+...+.+.+ +.+.++.++..++..+ +|+||||||++|++++.+
T Consensus 82 ~~~---~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~ 157 (331)
T 3gff_A 82 HNT---NRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRT 157 (331)
T ss_dssp CCS---SHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHT
T ss_pred CCC---CcccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHh
Confidence 762 11111100 000011111222322 3455666665566544 899999999999999999
Q ss_pred CCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCC-hhhhhccCCCcEEEEecCCCC-------ccChHHHH
Q 004067 659 FPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSS-VMHHVHKMKGKLLLVHGMIDE-------NVHFRHTA 730 (776)
Q Consensus 659 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~P~lii~G~~D~-------~v~~~~~~ 730 (776)
+|++|+++++.+|...|... ..+.... .+........|+++.+|+.|. .++...+.
T Consensus 158 ~p~~F~~~~~~S~~~w~~~~----------------~~~~~~~~~~~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~ 221 (331)
T 3gff_A 158 DRPLFSAYLALDTSLWFDSP----------------HYLTLLEERVVKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNL 221 (331)
T ss_dssp TCSSCSEEEEESCCTTTTTT----------------HHHHHHHHHHHHCCCSSEEEEEEECCCSEETTTEECCHHHHHHH
T ss_pred CchhhheeeEeCchhcCChH----------------HHHHHHHHHhhcccCCCCeEEEEeCCCCCCCccchHHHHHHHHH
Confidence 99999999999998644211 0010000 011111234799999999998 56777889
Q ss_pred HHHHHHHHC---CCCeEEEEecCCCCCC
Q 004067 731 RLINALVAA---RKPYEILIFPDERHMP 755 (776)
Q Consensus 731 ~~~~~l~~~---~~~~~~~~~~~~~H~~ 755 (776)
++++.|++. |.++++.++|+++|..
T Consensus 222 ~l~~~Lk~~~~~g~~~~~~~~pg~~H~s 249 (331)
T 3gff_A 222 AFADKLTKLAPKGLGFMAKYYPEETHQS 249 (331)
T ss_dssp HHHHHHHHHCCTTEEEEEEECTTCCTTT
T ss_pred HHHHHHHhccCCCceEEEEECCCCCccc
Confidence 999999886 5689999999999975
No 318
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.52 E-value=4.8e-13 Score=141.02 Aligned_cols=297 Identities=7% Similarity=-0.024 Sum_probs=176.8
Q ss_pred CCeeeEEEeecCCCce--EEEEeCCCcEEEEeCCCCccceecCCC----CCCCccCceeCCC----CCEEEEEEC-CcEE
Q 004067 125 LGVTRYEWVKTSSKKK--IIMVPLPDGIYFQDLSCSKPELKLSSS----SCSPVIDPHLSSD----GTMIAFVRD-CELH 193 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~--~l~~~~~~~l~~~d~~~~~~~~~l~~~----~~~~~~~~~~SpD----g~~la~~~~-~~l~ 193 (776)
..+....|+|.++|+. .++...++.|.+||+.+++....+... ....+..+.|+|+ |+.|+.... +.|.
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~ 98 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIR 98 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEE
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEE
Confidence 4688999998433466 444456778999999977654233311 1234778999999 556776664 4799
Q ss_pred EEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcce
Q 004067 194 VLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQED 272 (776)
Q Consensus 194 ~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (776)
+|++.+++.......... .+..+.|+| |++.|+....+
T Consensus 99 v~d~~~~~~~~~~~~~~~-----------------~i~~~~~~~~~~~~l~s~~~d------------------------ 137 (366)
T 3k26_A 99 IINPITMQCIKHYVGHGN-----------------AINELKFHPRDPNLLLSVSKD------------------------ 137 (366)
T ss_dssp EECTTTCCEEEEEESCCS-----------------CEEEEEECSSCTTEEEEEETT------------------------
T ss_pred EEEchhceEeeeecCCCC-----------------cEEEEEECCCCCCEEEEEeCC------------------------
Confidence 999998876544332211 155789999 88888776543
Q ss_pred ecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE
Q 004067 273 HAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 352 (776)
Q Consensus 273 ~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~ 352 (776)
..|++||+.+++....-.. ...+...+..+.|+|||+.++... .+..|.+||+.+++..
T Consensus 138 ------------g~i~iwd~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 138 ------------HALRLWNIQTDTLVAIFGG-----VEGHRDEVLSADYDLLGEKIMSCG----MDHSLKLWRINSKRMM 196 (366)
T ss_dssp ------------SCEEEEETTTTEEEEEECS-----TTSCSSCEEEEEECTTSSEEEEEE----TTSCEEEEESCSHHHH
T ss_pred ------------CeEEEEEeecCeEEEEecc-----cccccCceeEEEECCCCCEEEEec----CCCCEEEEECCCCccc
Confidence 2489999998876554210 134667899999999999877665 3456999999876532
Q ss_pred EEEEec------------------cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee---------
Q 004067 353 VILVEE------------------LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL--------- 405 (776)
Q Consensus 353 ~l~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~--------- 405 (776)
...... ...+..... ....-..+.++ +.++++...+| .|.+|++..+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~-~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~ 272 (366)
T 3k26_A 197 NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI-HRNYVDCVRWL-GDLILSKSCEN--AIVCWKPGKMEDDIDKIKPSE 272 (366)
T ss_dssp HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS-CSSCCCEEEEE-TTEEEEECSSS--EEEEEEESSTTCCGGGCCTTC
T ss_pred cccceeEEecCCCCcccccceeeccCccccccC-CcceEEEEEEc-CCEEEEEecCC--EEEEEeCCCccccccccccCC
Confidence 111100 000000000 00000012333 34566666677 788888765432
Q ss_pred ------eccccCCeEEEEEEeecCC--CcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC---CCeEEEEEcC
Q 004067 406 ------GPITEGDWMVEQIVGVNEA--SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG---KGKHVAVLDH 474 (776)
Q Consensus 406 ------~~lt~~~~~~~~~~~~s~d--g~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~---~~~~~~~~sp 474 (776)
..+..+...+.. +.|+++ |+.|+.. ..++ .+.+|.+.. +.........+..+ ..+..+.|+|
T Consensus 273 ~~~~~~~~~~~~~~~v~~-~~~s~~~~~~~l~~~-~~dg--~i~vwd~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~ 345 (366)
T 3k26_A 273 SNVTILGRFDYSQCDIWY-MRFSMDFWQKMLALG-NQVG--KLYVWDLEV---EDPHKAKCTTLTHHKCGAAIRQTSFSR 345 (366)
T ss_dssp CCEEEEEEEECSSCCSSC-CCCEECTTSSEEEEE-CTTS--CEEEEECCS---SSGGGCEEEEECCTTCCSCEEEEEECT
T ss_pred cchheeccccccCCcEEE-EEEcCCCCCcEEEEE-ecCC--cEEEEECCC---CCCccccceEEcccccCCceEEEEeCC
Confidence 112222222222 347888 8865554 4443 367777653 32111122345544 4577899999
Q ss_pred CcCEEEEEeeCCCCCCEEEEEEcC
Q 004067 475 NMRNFVDFHDSLDSPPRILLCSLQ 498 (776)
Q Consensus 475 dg~~l~~~~~~~~~~~~i~~~~~~ 498 (776)
||+.|+..... ..|++||+.
T Consensus 346 ~~~~l~s~~~d----g~i~iwd~~ 365 (366)
T 3k26_A 346 DSSILIAVCDD----ASIWRWDRL 365 (366)
T ss_dssp TSSEEEEEETT----SEEEEEEC-
T ss_pred CCCeEEEEeCC----CEEEEEEec
Confidence 99988876543 468888863
No 319
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.52 E-value=1.4e-12 Score=141.83 Aligned_cols=296 Identities=8% Similarity=0.016 Sum_probs=170.3
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCcc-----------ceecCCCC-----------CCCccCceeCCCC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKP-----------ELKLSSSS-----------CSPVIDPHLSSDG 181 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~-----------~~~l~~~~-----------~~~~~~~~~SpDg 181 (776)
..+....|+| ||++|+.. .++.|.+||+.+++. ...+..+. ...+..+.|+|++
T Consensus 29 ~~V~~v~~s~---~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 29 DIISTVEFNH---SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GSEEEEEECS---SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred CcEEEEEECC---CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4688999999 99999987 688999999998762 21343332 0347889999998
Q ss_pred --CEEEEEEC-CcEEEEecCCCceeEEeeCCCCC-c-e-----ec--CCcc-----c--------c-eecccCCcceEEE
Q 004067 182 --TMIAFVRD-CELHVLNLLINEQRQLTHGANGN-T-V-----TH--GLAE-----Y--------I-AQEEMDRKTGYWW 235 (776)
Q Consensus 182 --~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~-~-~-----~~--~~~~-----~--------~-~~~~~~~~~~~~w 235 (776)
..|+..+. +.|.+|++.++............ . . .. .++. + . .......+..++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 67776654 57999998876543211000000 0 0 00 0000 0 0 0112233668999
Q ss_pred CCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC-CceEE-EEcccCCCCCCCCc
Q 004067 236 SLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG-GPVSW-MDLQCGGTDQNYDE 313 (776)
Q Consensus 236 spDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~-~~~~~-l~~~~~~~~~~~~~ 313 (776)
+|||+.|+.. .+ ..|.+||+.+ ++... +... +.....+.
T Consensus 186 ~~~~~~l~s~-~d------------------------------------~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~ 226 (447)
T 3dw8_B 186 NSDYETYLSA-DD------------------------------------LRINLWHLEITDRSFNIVDIK--PANMEELT 226 (447)
T ss_dssp CTTSSEEEEE-CS------------------------------------SEEEEEETTEEEEEEEEEECC--CSSGGGCC
T ss_pred cCCCCEEEEe-CC------------------------------------CeEEEEECCCCCceeeeeecc--cccccccC
Confidence 9999988864 22 3578999984 33322 2111 11124566
Q ss_pred ceEEEEEeccCC-eEEEEEEeecCceEEEEEEECCCCce-----EEEEEecc------------CceeecccccccCCCC
Q 004067 314 EYLARVNWMHGN-ILTAQVLNRSQTKLKVLKFDIKTGQR-----KVILVEEL------------DSWVNLHDCFTPLDKG 375 (776)
Q Consensus 314 ~~~~~~~~SpDg-~~l~~~~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~------------~~~~~~~~~~~~~~~~ 375 (776)
..+..++|+|+| +.++..+ .+..|.+||+.++.. +.+..+.. .... -.|+|
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~s~---- 295 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSS----SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISD---VKFSH---- 295 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEE----TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEE---EEECT----
T ss_pred cceEEEEECCCCCcEEEEEe----CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEE---EEECC----
Confidence 789999999999 7777666 345699999998874 44433322 1111 11222
Q ss_pred ccccCCeEEEEeccCCceEEEEEeCCC-ce-eeccccCCeE---------------EEEEEeecCCCcEEEEEEccCCCc
Q 004067 376 VTKYSGGFIWASEKTGFRHLYLHDING-TC-LGPITEGDWM---------------VEQIVGVNEASGQVYFTGTLDGPL 438 (776)
Q Consensus 376 ~~~~~~~~~~~s~~~g~~~l~~~~~~g-~~-~~~lt~~~~~---------------~~~~~~~s~dg~~i~~~~~~~~~~ 438 (776)
++.++++... | .|.+||+.. ++ ...+..+... +.. +.|+++|++| +++..++
T Consensus 296 ----~g~~l~~~~~-~--~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~-~~~s~~~~~l-~s~s~dg-- 364 (447)
T 3dw8_B 296 ----SGRYMMTRDY-L--SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFE-CCWNGSDSVV-MTGSYNN-- 364 (447)
T ss_dssp ----TSSEEEEEES-S--EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCC-EEECTTSSEE-EEECSTT--
T ss_pred ----CCCEEEEeeC-C--eEEEEeCCCCccccceeeccccccccccccccccccccceE-EEECCCCCEE-EEeccCC--
Confidence 2334555444 5 899999864 43 3334333210 011 3599999976 4555444
Q ss_pred eeeEEEEEeCCCCCCccccceee----------------------------------cCCCCeEEEEEcCCcCEEEEEee
Q 004067 439 ESHLYCAKLYPDWNHTLEAPVKL----------------------------------TNGKGKHVAVLDHNMRNFVDFHD 484 (776)
Q Consensus 439 ~~~l~~~~~~~~g~~~~~~~~~l----------------------------------~~~~~~~~~~~spdg~~l~~~~~ 484 (776)
.+.+|.+.. +. ...+ .....+..++|+|+|+.|+...+
T Consensus 365 ~v~iwd~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~ 436 (447)
T 3dw8_B 365 FFRMFDRNT---KR-----DITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATT 436 (447)
T ss_dssp EEEEEETTT---CC-----EEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECS
T ss_pred EEEEEEcCC---Cc-----ceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEec
Confidence 366665431 21 1111 11123556899999999988765
Q ss_pred CCCCCCEEEEEEc
Q 004067 485 SLDSPPRILLCSL 497 (776)
Q Consensus 485 ~~~~~~~i~~~~~ 497 (776)
+ .++++..
T Consensus 437 ~-----~~~~~~~ 444 (447)
T 3dw8_B 437 N-----NLYIFQD 444 (447)
T ss_dssp S-----CEEEEEC
T ss_pred c-----eeeeecc
Confidence 3 4777653
No 320
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.52 E-value=1.1e-11 Score=135.66 Aligned_cols=327 Identities=9% Similarity=-0.000 Sum_probs=192.6
Q ss_pred eEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCce
Q 004067 61 GFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKK 140 (776)
Q Consensus 61 ~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~ 140 (776)
.+++||++|+..+.+ ..|.+||+.+++....... +...+....|+| ++.
T Consensus 127 ~~~~~~~~l~sgs~d-----g~i~vwd~~~~~~~~~~~~-----------------------h~~~V~~l~~~~---~~~ 175 (464)
T 3v7d_B 127 CLQFEDNYVITGADD-----KMIRVYDSINKKFLLQLSG-----------------------HDGGVWALKYAH---GGI 175 (464)
T ss_dssp EEEEETTEEEEEETT-----SCEEEEETTTTEEEEEECC-----------------------CSSCEEEEEECS---TTE
T ss_pred EEEECCCEEEEEcCC-----CcEEEEECCCCcEEEEEeC-----------------------CCcCEEEEEEcC---CCE
Confidence 567788888865542 4699999999886544421 124788999999 884
Q ss_pred EEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeC--CCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCceecC
Q 004067 141 IIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLS--SDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTVTHG 217 (776)
Q Consensus 141 ~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~S--pDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~~~~ 217 (776)
.+.-..++.|.+||+.+++....+..... .+....|+ |+++.++..+. +.|.+|++.++.................
T Consensus 176 l~s~s~dg~i~vwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCCTHVFEGHNS-TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEES
T ss_pred EEEEeCCCCEEEEECCCCcEEEEECCCCC-ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee
Confidence 44445889999999999887634443333 47777777 67788877764 5799999988764332111110000000
Q ss_pred Cc----ccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 218 LA----EYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 218 ~~----~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
.+ ............-..++|+++.|+....+ ..|.+||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------------------------------------~~i~vwd~~ 298 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD------------------------------------NTLIVWDVA 298 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT------------------------------------SCEEEEETT
T ss_pred ccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC------------------------------------CeEEEEECC
Confidence 00 00000000001123457778877765533 247999999
Q ss_pred CCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEe-ccCceeecccccccC
Q 004067 294 GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE-ELDSWVNLHDCFTPL 372 (776)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~~~~~~~ 372 (776)
+++....- ..+...+..+.|+|||+.++..+ .+..|.+||+.+++....... ......
T Consensus 299 ~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~sg~----~dg~i~vwd~~~~~~~~~~~~h~~~v~~--------- 357 (464)
T 3v7d_B 299 QMKCLYIL--------SGHTDRIYSTIYDHERKRCISAS----MDTTIRIWDLENGELMYTLQGHTALVGL--------- 357 (464)
T ss_dssp TTEEEEEE--------CCCSSCEEEEEEETTTTEEEEEE----TTSCEEEEETTTTEEEEEECCCSSCEEE---------
T ss_pred CCcEEEEe--------cCCCCCEEEEEEcCCCCEEEEEe----CCCcEEEEECCCCcEEEEEeCCCCcEEE---------
Confidence 88765431 34667799999999999877665 345699999998876544332 221110
Q ss_pred CCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCC
Q 004067 373 DKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 452 (776)
Q Consensus 373 ~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~ 452 (776)
+.++ +..+++...+| .|.+|++.++...........+ ....++++++.++..+ ++ .+.+|.+. .|.
T Consensus 358 ---~~~~-~~~l~s~s~dg--~v~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~--dg--~i~iwd~~---~g~ 423 (464)
T 3v7d_B 358 ---LRLS-DKFLVSAAADG--SIRGWDANDYSRKFSYHHTNLS-AITTFYVSDNILVSGS--EN--QFNIYNLR---SGK 423 (464)
T ss_dssp ---EEEC-SSEEEEEETTS--EEEEEETTTCCEEEEEECTTCC-CEEEEEECSSEEEEEE--TT--EEEEEETT---TCC
T ss_pred ---EEEc-CCEEEEEeCCC--cEEEEECCCCceeeeecCCCCc-cEEEEEeCCCEEEEec--CC--eEEEEECC---CCc
Confidence 1222 34566666677 8999998876543333222222 2345889999666554 33 36677664 343
Q ss_pred Ccccccee-ecCC-CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 453 HTLEAPVK-LTNG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 453 ~~~~~~~~-l~~~-~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
.+.. +... ..+..++|+ ++.++...+... ...++++|+
T Consensus 424 ----~~~~~~~~~~~~v~~v~~~--~~~l~~~~~~~g-~~~i~~ldf 463 (464)
T 3v7d_B 424 ----LVHANILKDADQIWSVNFK--GKTLVAAVEKDG-QSFLEILDF 463 (464)
T ss_dssp ----EEESCTTTTCSEEEEEEEE--TTEEEEEEEETT-EEEEEEEEC
T ss_pred ----EEehhhccCCCcEEEEEec--CCEEEEEEEeCC-eEEEEEeec
Confidence 2322 2222 235566665 677777765433 234444443
No 321
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.52 E-value=2e-11 Score=127.07 Aligned_cols=281 Identities=13% Similarity=0.033 Sum_probs=175.4
Q ss_pred CCeeeEEEeecCCC-ceEEEEe-CCCcEEEEeCCCCccc-----eecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEe
Q 004067 125 LGVTRYEWVKTSSK-KKIIMVP-LPDGIYFQDLSCSKPE-----LKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLN 196 (776)
Q Consensus 125 ~~~~~~~~sp~~~d-g~~l~~~-~~~~l~~~d~~~~~~~-----~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~ 196 (776)
..|....|+| | ++.|+.. .|+.|.+||+..++.. ..+.... ..+....|+|||+.|+.... +.|++++
T Consensus 39 ~~V~~v~~sp---~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~-~~V~~~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 39 GWVTQIATTP---QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS-HFVSDVVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp SCEEEEEECT---TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS-SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCEEEEEEeC---CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC-CCEEEEEECCCCCEEEEEcccccceEEe
Confidence 4789999999 8 4667654 7889999999876532 1233333 34788999999999988775 4688999
Q ss_pred cCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCC
Q 004067 197 LLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYP 276 (776)
Q Consensus 197 l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (776)
...+........... ......++|+++.|+..+.+
T Consensus 115 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~s~s~d---------------------------- 149 (340)
T 4aow_A 115 LTTGTTTRRFVGHTK-----------------DVLSVAFSSDNRQIVSGSRD---------------------------- 149 (340)
T ss_dssp TTTTEEEEEEECCSS-----------------CEEEEEECTTSSCEEEEETT----------------------------
T ss_pred ecccceeeeecCCCC-----------------ceeEEEEeecCccceeecCC----------------------------
Confidence 888766554433221 02356689999988876643
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCCCceEEEE
Q 004067 277 FAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVIL 355 (776)
Q Consensus 277 ~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~g~~~~l~ 355 (776)
..+.+||..+........ ..+...+..+.|++++. .++.... .+..|.+||+.++......
T Consensus 150 --------~~~~~~d~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~s~~---~d~~i~i~d~~~~~~~~~~ 211 (340)
T 4aow_A 150 --------KTIKLWNTLGVCKYTVQD-------ESHSEWVSCVRFSPNSSNPIIVSCG---WDKLVKVWNLANCKLKTNH 211 (340)
T ss_dssp --------SCEEEECTTSCEEEEECS-------SSCSSCEEEEEECSCSSSCEEEEEE---TTSCEEEEETTTTEEEEEE
T ss_pred --------CeEEEEEeCCCceEEEEe-------ccccCcccceEEccCCCCcEEEEEc---CCCEEEEEECCCCceeeEe
Confidence 236788887766555433 45566788899999876 3333322 3445899999988765443
Q ss_pred Ee-ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEcc
Q 004067 356 VE-ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 434 (776)
Q Consensus 356 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~ 434 (776)
.. ....... .|+| ++.++++...+| .|.+||+...+..........+... .|++++..+.. +.
T Consensus 212 ~~h~~~v~~~---~~s~--------~~~~l~s~s~Dg--~i~iwd~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~-~~- 275 (340)
T 4aow_A 212 IGHTGYLNTV---TVSP--------DGSLCASGGKDG--QAMLWDLNEGKHLYTLDGGDIINAL-CFSPNRYWLCA-AT- 275 (340)
T ss_dssp CCCSSCEEEE---EECT--------TSSEEEEEETTC--EEEEEETTTTEEEEEEECSSCEEEE-EECSSSSEEEE-EE-
T ss_pred cCCCCcEEEE---EECC--------CCCEEEEEeCCC--eEEEEEeccCceeeeecCCceEEee-ecCCCCceeec-cC-
Confidence 32 2221111 1333 334666666777 8999998877654433333344444 48998874433 32
Q ss_pred CCCceeeEEEEEeCCCCCCccccceeec---------C-CCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCc
Q 004067 435 DGPLESHLYCAKLYPDWNHTLEAPVKLT---------N-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 501 (776)
Q Consensus 435 ~~~~~~~l~~~~~~~~g~~~~~~~~~l~---------~-~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~ 501 (776)
++ .+.+|.+. .+. ....+. . ...+..++|+|||++|+..... ..|++|++.+|+
T Consensus 276 d~--~i~iwd~~---~~~----~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D----g~v~iW~~~tGt 339 (340)
T 4aow_A 276 GP--SIKIWDLE---GKI----IVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD----NLVRVWQVTIGT 339 (340)
T ss_dssp TT--EEEEEETT---TTE----EEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT----SCEEEEEEEC--
T ss_pred CC--EEEEEECC---CCe----EEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC----CEEEEEeCCCcC
Confidence 32 25666543 111 111111 1 1246788999999988765432 359999998886
No 322
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.7e-12 Score=133.34 Aligned_cols=280 Identities=11% Similarity=0.043 Sum_probs=162.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.|||| .||..+. ...|.+|++.++..+.+..... ..+...+....|+|
T Consensus 17 v~~~~~s~~--~las~~~-----D~~i~lw~~~~~~~~~~~~~~~-------------------~~h~~~v~~v~~sp-- 68 (330)
T 2hes_X 17 IWSFDFSQG--ILATGST-----DRKIKLVSVKYDDFTLIDVLDE-------------------TAHKKAIRSVAWRP-- 68 (330)
T ss_dssp EEEEEEETT--EEEEEES-----SSCEEEEECSSSCCEEEEEECT-------------------TCCCSCEEEEEECT--
T ss_pred eeeeccCCC--EEEEEcC-----CCEEEEEEecCCCeEEEEEEec-------------------CCccCCEEEEEECC--
Confidence 477889998 6664443 2469999998764322211000 00124688999999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCc-------cceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCC-Cce-eEE
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSK-------PELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLI-NEQ-RQL 205 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~-------~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~-g~~-~~l 205 (776)
||+.|+.. .++.|.+||+.++. ....+..+. ..+..++|||||+.|+..+. +.|.+|++.. +.. +.+
T Consensus 69 -~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~ 146 (330)
T 2hes_X 69 -HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE-NEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECI 146 (330)
T ss_dssp -TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEE
T ss_pred -CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC-CcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEE
Confidence 99998876 68899999986432 111333333 34788999999999998875 5799999943 322 222
Q ss_pred e-eCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCe
Q 004067 206 T-HGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVK 284 (776)
Q Consensus 206 t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 284 (776)
. ..+. . ..+..+.|+||++.|+..+.|
T Consensus 147 ~~~~~h--------~--------~~v~~v~~~p~~~~l~s~s~D------------------------------------ 174 (330)
T 2hes_X 147 SVLQEH--------S--------QDVKHVIWHPSEALLASSSYD------------------------------------ 174 (330)
T ss_dssp EEECCC--------S--------SCEEEEEECSSSSEEEEEETT------------------------------------
T ss_pred EEeccC--------C--------CceEEEEECCCCCEEEEEcCC------------------------------------
Confidence 1 1111 0 114578999999988877644
Q ss_pred EEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccC--CeEEEEEEeecCceEEEEEEECCCCce------EEEEE
Q 004067 285 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQR------KVILV 356 (776)
Q Consensus 285 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~l~~~d~~~g~~------~~l~~ 356 (776)
..|.+||..++....+.. +..+...+..+.|+|+ +..++..+ .+..|.+||+.++.. ..+..
T Consensus 175 ~~i~iW~~~~~~~~~~~~------~~~h~~~v~~~~~~~~~~~~~l~s~s----~D~~v~iw~~~~~~~~~~~~~~~~~~ 244 (330)
T 2hes_X 175 DTVRIWKDYDDDWECVAV------LNGHEGTVWSSDFDKTEGVFRLCSGS----DDSTVRVWKYMGDDEDDQQEWVCEAI 244 (330)
T ss_dssp SCEEEEEEETTEEEEEEE------ECCCSSCEEEEEECCSSSSCEEEEEE----TTSCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CeEEEEECCCCCeeEEEE------ccCCCCcEEEEEecCCCCeeEEEEEe----CCCeEEEEEecCCCccccceeEEeee
Confidence 236888887664332222 1567778999999999 55666554 344588888755311 11111
Q ss_pred ----eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee----ccccCCe-EEEEEEeecC--CC
Q 004067 357 ----EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG----PITEGDW-MVEQIVGVNE--AS 425 (776)
Q Consensus 357 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~----~lt~~~~-~~~~~~~~s~--dg 425 (776)
+....+. +++.+++++++...+| .|.+|+..+++.+ .+..+.. .+..+ .|+| ++
T Consensus 245 ~~~~h~~~v~~------------v~~s~~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v-~~~~~~~~ 309 (330)
T 2hes_X 245 LPDVHKRQVYN------------VAWGFNGLIASVGADG--VLAVYEEVDGEWKVFAKRALCHGVYEINVV-KWLELNGK 309 (330)
T ss_dssp CCSCCSSCEEE------------EEECTTSCEEEEETTS--CEEEEEEETTEEEEEEEESCTTTTSCEEEE-EEC-----
T ss_pred cccccccceEE------------EEEcCCCEEEEEeCCC--EEEEEEcCCCceEEEeccccccccceEEEE-EEecCCCc
Confidence 1111111 1333444566666677 7778887665422 1222332 45554 4888 56
Q ss_pred cEEEEEEccCCCceeeEEEEE
Q 004067 426 GQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 426 ~~i~~~~~~~~~~~~~l~~~~ 446 (776)
+. ++++..++. +.||.+.
T Consensus 310 ~~-las~s~Dg~--v~~W~~~ 327 (330)
T 2hes_X 310 TI-LATGGDDGI--VNFWSLE 327 (330)
T ss_dssp CC-EEEEETTSE--EEEEEC-
T ss_pred eE-EEEecCCCc--EEEEEec
Confidence 64 555555543 7888765
No 323
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.51 E-value=3.3e-12 Score=145.13 Aligned_cols=288 Identities=10% Similarity=0.025 Sum_probs=183.7
Q ss_pred CCeeeEEEeecCCCceEEEEeCCCcEEEEeCCCC----ccceecCCCCCCC-ccCceeCC--CCCEEEEEEC-CcEEEEe
Q 004067 125 LGVTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCS----KPELKLSSSSCSP-VIDPHLSS--DGTMIAFVRD-CELHVLN 196 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~----~~~~~l~~~~~~~-~~~~~~Sp--Dg~~la~~~~-~~l~~~~ 196 (776)
..+..+.|+| ||++|++..++.|.+||+.++ +....+..+. .. +..++||| ||+.|+.... +.|.+|+
T Consensus 19 ~~v~~~~~sp---dg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~-~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 19 NFTTHLSYDP---TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHG-SSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp TCCCCCEEET---TTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTT-TSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CceeEEEECC---CCCEEEEecCCeEEEEECCCCCCccccceEEecCC-CceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 4678899999 999999999999999999987 5553555443 35 78899999 9999998875 5799999
Q ss_pred cCCC------ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCc
Q 004067 197 LLIN------EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQ 270 (776)
Q Consensus 197 l~~g------~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (776)
+.++ +.+.+..-... ...+..+.|+|||+.|+....+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~~~~~~~------------------- 140 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVL---------------AGPISDISWDFEGRRLCVVGEGRDN------------------- 140 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECC---------------SSCEEEEEECTTSSEEEEEECCSSC-------------------
T ss_pred CCCCcccccccccccchhhcc---------------cccEEEEEEeCCCCEEEEeccCCCC-------------------
Confidence 9766 33322211100 0115578999999999887643221
Q ss_pred ceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe-EEEEEEeecCceEEEEEEECCCC
Q 004067 271 EDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTG 349 (776)
Q Consensus 271 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~g 349 (776)
...|++|| .+.....+ ..+...+..+.|+||++ .++... .+..|.+||+.++
T Consensus 141 -------------~~~v~~~d-~~~~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~~----~d~~v~vwd~~~~ 193 (615)
T 1pgu_A 141 -------------FGVFISWD-SGNSLGEV---------SGHSQRINACHLKQSRPMRSMTVG----DDGSVVFYQGPPF 193 (615)
T ss_dssp -------------SEEEEETT-TCCEEEEC---------CSCSSCEEEEEECSSSSCEEEEEE----TTTEEEEEETTTB
T ss_pred -------------ccEEEEEE-CCCcceee---------ecCCccEEEEEECCCCCcEEEEEe----CCCcEEEEeCCCc
Confidence 14577777 22223333 45677899999999998 555544 4457999999887
Q ss_pred ceEEEEE-ecc---CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-ecc-c---cCCeEEEEEEe
Q 004067 350 QRKVILV-EEL---DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPI-T---EGDWMVEQIVG 420 (776)
Q Consensus 350 ~~~~l~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~l-t---~~~~~~~~~~~ 420 (776)
+...... +.. .... -.|+| +++.++++...+| .|++|++..++. ..+ . .+...+..+.
T Consensus 194 ~~~~~~~~~~~~~~~v~~---~~~~~-------~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~- 260 (615)
T 1pgu_A 194 KFSASDRTHHKQGSFVRD---VEFSP-------DSGEFVITVGSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALS- 260 (615)
T ss_dssp EEEEEECSSSCTTCCEEE---EEECS-------TTCCEEEEEETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEE-
T ss_pred ceeeeecccCCCCceEEE---EEECC-------CCCCEEEEEeCCC--eEEEEECCCCCEeEEecccccccCCceEEEE-
Confidence 7654433 222 1111 11222 1134666666666 899999876654 444 3 4455566654
Q ss_pred ecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC-----CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEE
Q 004067 421 VNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-----KGKHVAVLDHNMRNFVDFHDSLDSPPRILLC 495 (776)
Q Consensus 421 ~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~-----~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~ 495 (776)
|+ +++.++..+. ++ .+.+|.+. .+. ....+... .....+.++ +++.++..... ..|.++
T Consensus 261 ~~-~~~~l~~~~~-d~--~i~~wd~~---~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~----g~i~~~ 324 (615)
T 1pgu_A 261 WL-DSQKFATVGA-DA--TIRVWDVT---TSK----CVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLD----GTLNFY 324 (615)
T ss_dssp ES-SSSEEEEEET-TS--EEEEEETT---TTE----EEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETT----SCEEEE
T ss_pred Ec-CCCEEEEEcC-CC--cEEEEECC---CCc----EEEEEcCCCCcccCceeEEEeC-CCCeEEEEECC----CCEEEE
Confidence 88 8887665544 32 25666554 232 34444433 234455665 88877766543 358999
Q ss_pred EcCCCceeEee
Q 004067 496 SLQDGSLVLPL 506 (776)
Q Consensus 496 ~~~~~~~~~~l 506 (776)
+..+++....+
T Consensus 325 d~~~~~~~~~~ 335 (615)
T 1pgu_A 325 ELGHDEVLKTI 335 (615)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCCCcEEEEE
Confidence 98776655544
No 324
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.50 E-value=7.6e-12 Score=144.27 Aligned_cols=278 Identities=13% Similarity=0.039 Sum_probs=174.6
Q ss_pred CCeeeEEEeecCCCce-EEEEe-CCCcEEEEeCCCCcc-----ceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEe
Q 004067 125 LGVTRYEWVKTSSKKK-IIMVP-LPDGIYFQDLSCSKP-----ELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLN 196 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~-~l~~~-~~~~l~~~d~~~~~~-----~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~ 196 (776)
..+....|+| ++. .|+.. .++.|.+||+..... ...+..+.. .+..+.|||||+.|+..+. +.|.+||
T Consensus 383 ~~V~~v~~~~---~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 383 DMVTAIATPI---DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH-FVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp SCEEEEECCT---TCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceeEEEEecC---CCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCC-cEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 4578889998 764 45443 788999999976432 113444433 4788999999999988874 5799999
Q ss_pred cCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCC
Q 004067 197 LLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYP 276 (776)
Q Consensus 197 l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (776)
+.++...+....... .+..+.|+|||+.|+..+.+
T Consensus 459 ~~~~~~~~~~~~h~~-----------------~v~~~~~s~~~~~l~s~s~D---------------------------- 493 (694)
T 3dm0_A 459 LAAGVSTRRFVGHTK-----------------DVLSVAFSLDNRQIVSASRD---------------------------- 493 (694)
T ss_dssp TTTTEEEEEEECCSS-----------------CEEEEEECTTSSCEEEEETT----------------------------
T ss_pred CCCCcceeEEeCCCC-----------------CEEEEEEeCCCCEEEEEeCC----------------------------
Confidence 998876543332211 14578899999999877644
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe--EEEEEEeecCceEEEEEEECCCCceEEE
Q 004067 277 FAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI--LTAQVLNRSQTKLKVLKFDIKTGQRKVI 354 (776)
Q Consensus 277 ~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~--~l~~~~~~~~~~~~l~~~d~~~g~~~~l 354 (776)
..|.+||..+.....+... ...+...+..++|+|++. .++..+ .+..|.+||+.++.....
T Consensus 494 --------~~i~iwd~~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~~l~s~s----~d~~v~vwd~~~~~~~~~ 556 (694)
T 3dm0_A 494 --------RTIKLWNTLGECKYTISEG-----GEGHRDWVSCVRFSPNTLQPTIVSAS----WDKTVKVWNLSNCKLRST 556 (694)
T ss_dssp --------SCEEEECTTSCEEEEECSS-----TTSCSSCEEEEEECSCSSSCEEEEEE----TTSCEEEEETTTCCEEEE
T ss_pred --------CEEEEEECCCCcceeeccC-----CCCCCCcEEEEEEeCCCCcceEEEEe----CCCeEEEEECCCCcEEEE
Confidence 2378898876655444221 134556789999999983 455444 345699999998876544
Q ss_pred EE-eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEc
Q 004067 355 LV-EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGT 433 (776)
Q Consensus 355 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~ 433 (776)
.. +....... .|+| ++.++++...+| .|.+||+..++..........+..+ .|+|++..++...
T Consensus 557 ~~~h~~~v~~v---~~sp--------dg~~l~sg~~Dg--~i~iwd~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~~~~- 621 (694)
T 3dm0_A 557 LAGHTGYVSTV---AVSP--------DGSLCASGGKDG--VVLLWDLAEGKKLYSLEANSVIHAL-CFSPNRYWLCAAT- 621 (694)
T ss_dssp ECCCSSCEEEE---EECT--------TSSEEEEEETTS--BCEEEETTTTEEEECCBCSSCEEEE-EECSSSSEEEEEE-
T ss_pred EcCCCCCEEEE---EEeC--------CCCEEEEEeCCC--eEEEEECCCCceEEEecCCCcEEEE-EEcCCCcEEEEEc-
Confidence 33 22222211 1333 334666666677 8999998776543322333345544 4999998655443
Q ss_pred cCCCceeeEEEEEeCCCCCCccccceeecCC--------------------CCeEEEEEcCCcCEEEEEeeCCCCCCEEE
Q 004067 434 LDGPLESHLYCAKLYPDWNHTLEAPVKLTNG--------------------KGKHVAVLDHNMRNFVDFHDSLDSPPRIL 493 (776)
Q Consensus 434 ~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~--------------------~~~~~~~~spdg~~l~~~~~~~~~~~~i~ 493 (776)
.. .+.||.+.. +. .+..+... ..+..+.|||||+.|+..... ..|.
T Consensus 622 ~~---~i~iwd~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~D----g~i~ 687 (694)
T 3dm0_A 622 EH---GIKIWDLES---KS----IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTD----GVIR 687 (694)
T ss_dssp TT---EEEEEETTT---TE----EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETT----SEEE
T ss_pred CC---CEEEEECCC---CC----ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCC----CeEE
Confidence 22 256665531 21 11222110 013567999999998865433 3688
Q ss_pred EEEc
Q 004067 494 LCSL 497 (776)
Q Consensus 494 ~~~~ 497 (776)
+|++
T Consensus 688 iW~i 691 (694)
T 3dm0_A 688 VWGI 691 (694)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8876
No 325
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.49 E-value=2.2e-11 Score=126.45 Aligned_cols=282 Identities=11% Similarity=0.058 Sum_probs=162.1
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccc--eecCCC-CCCCccCceeCCCCCEEEEEEC-CcEEEEecCC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPE--LKLSSS-SCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLI 199 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~-~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~ 199 (776)
..+..+.|+| + .|+.. .++.|.+||+.++... ..+... ....+..++|+|||+.|+..+. +.|.+|++.+
T Consensus 15 ~~v~~~~~s~---~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 15 EKIWSFDFSQ---G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp SCEEEEEEET---T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred CceeeeccCC---C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 3688899998 7 55544 7889999999876432 133222 3334788999999999988874 5799999864
Q ss_pred Cce-----eEE-eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCccee
Q 004067 200 NEQ-----RQL-THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 273 (776)
Q Consensus 200 g~~-----~~l-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (776)
+.. ..+ +..+ .. ..+..++|+|||+.|+..+.|
T Consensus 90 ~~~~~~~~~~~~~~~~--------h~--------~~V~~v~~sp~g~~las~s~D------------------------- 128 (330)
T 2hes_X 90 SADRTFEMDLLAIIEG--------HE--------NEVKGVAWSNDGYYLATCSRD------------------------- 128 (330)
T ss_dssp -----CCCEEEEEEC--------------------CEEEEEECTTSCEEEEEETT-------------------------
T ss_pred CcCccccceeEEEEcC--------CC--------CcEEEEEECCCCCEEEEEeCC-------------------------
Confidence 321 111 1111 11 125578999999999877644
Q ss_pred cCCCCCCCCCeEEEEEEEcC-CCc-eEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce
Q 004067 274 AYPFAGASNVKVRLGVVSAA-GGP-VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 351 (776)
Q Consensus 274 ~~~~~g~~~~~~~l~~~d~~-~~~-~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~ 351 (776)
..|++||+. +++ ...+.. +..+...+..+.|+||++.|+..+ .+..|.+||..++..
T Consensus 129 -----------~~v~iwd~~~~~~~~~~~~~------~~~h~~~v~~v~~~p~~~~l~s~s----~D~~i~iW~~~~~~~ 187 (330)
T 2hes_X 129 -----------KSVWIWETDESGEEYECISV------LQEHSQDVKHVIWHPSEALLASSS----YDDTVRIWKDYDDDW 187 (330)
T ss_dssp -----------SCEEEEECCTTCCCCEEEEE------ECCCSSCEEEEEECSSSSEEEEEE----TTSCEEEEEEETTEE
T ss_pred -----------CEEEEEeccCCCCCeEEEEE------eccCCCceEEEEECCCCCEEEEEc----CCCeEEEEECCCCCe
Confidence 237899984 332 122211 145667899999999999877665 345688898877643
Q ss_pred EEE---EEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCc---------eeecccc-CCeEEEEE
Q 004067 352 KVI---LVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGT---------CLGPITE-GDWMVEQI 418 (776)
Q Consensus 352 ~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~---------~~~~lt~-~~~~~~~~ 418 (776)
+.+ ..+....+.. .|.|.. ++..+++...++ .|.+|++.++ ....+.. +...+..+
T Consensus 188 ~~~~~~~~h~~~v~~~---~~~~~~------~~~~l~s~s~D~--~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSS---DFDKTE------GVFRLCSGSDDS--TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNV 256 (330)
T ss_dssp EEEEEECCCSSCEEEE---EECCSS------SSCEEEEEETTS--CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEE
T ss_pred eEEEEccCCCCcEEEE---EecCCC------CeeEEEEEeCCC--eEEEEEecCCCccccceeEEeeecccccccceEEE
Confidence 333 2233333322 133321 123455556677 6777776543 1122332 34455555
Q ss_pred EeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccc-eeecCCC--CeEEEEEcC--CcCEEEEEeeCCCCCCEEE
Q 004067 419 VGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAP-VKLTNGK--GKHVAVLDH--NMRNFVDFHDSLDSPPRIL 493 (776)
Q Consensus 419 ~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~-~~l~~~~--~~~~~~~sp--dg~~l~~~~~~~~~~~~i~ 493 (776)
. |++++ +++++..++. +.||.+.. +.. ... ..+..+. .+..+.|+| |++.|+..... ..|.
T Consensus 257 ~-~s~~~--~l~s~~~dg~--v~iw~~~~---~~~--~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D----g~v~ 322 (330)
T 2hes_X 257 A-WGFNG--LIASVGADGV--LAVYEEVD---GEW--KVFAKRALCHGVYEINVVKWLELNGKTILATGGDD----GIVN 322 (330)
T ss_dssp E-ECTTS--CEEEEETTSC--EEEEEEET---TEE--EEEEEESCTTTTSCEEEEEEC-----CCEEEEETT----SEEE
T ss_pred E-EcCCC--EEEEEeCCCE--EEEEEcCC---Cce--EEEeccccccccceEEEEEEecCCCceEEEEecCC----CcEE
Confidence 4 88665 3455555543 78888762 310 011 1222333 467789999 67766655432 3588
Q ss_pred EEEcC
Q 004067 494 LCSLQ 498 (776)
Q Consensus 494 ~~~~~ 498 (776)
+|+..
T Consensus 323 ~W~~~ 327 (330)
T 2hes_X 323 FWSLE 327 (330)
T ss_dssp EEEC-
T ss_pred EEEec
Confidence 88764
No 326
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.49 E-value=3.5e-13 Score=135.64 Aligned_cols=244 Identities=14% Similarity=0.082 Sum_probs=144.2
Q ss_pred CceEEEEEcC-CCcEEEEEEEcCCCCCC----CCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCC
Q 004067 523 PPDIVQIQAN-DGTVLYGALYKPDESRY----GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 597 (776)
Q Consensus 523 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~----~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 597 (776)
....+++.+. -|..+.+.+|.|+++.. ..+++|||+++||.+++.. .|.... ...+.+++.+.+++++|..
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~---~w~~~~-~~~~~~~~~~~~~v~p~~~ 88 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPD---NASEKA-FWQFQADKYGFAIVFPDTS 88 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHH---HHHHHS-CHHHHHHHHTCEEEEECSS
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChH---HHHHhc-hHhHHHHHcCchhhccCCC
Confidence 3455666664 57889999999987532 2368999999999876543 343211 2245667789999999842
Q ss_pred CCC-------C------Cchhh-hhhh------hhccCCccHHHHHHHHHHHHH----cCCCCCCcEEEEeechHHHHHH
Q 004067 598 GTA-------R------RGLKF-EASI------KHNCGRIDAEDQLTGAEWLIK----QGLAKVGHIGLYGWSYGGYLSA 653 (776)
Q Consensus 598 g~g-------~------~~~~~-~~~~------~~~~~~~~~~D~~~~i~~l~~----~~~id~~~i~l~G~S~GG~~a~ 653 (776)
-.+ . .+..+ .+.. ...+..+-.+++...|+.-.. +...+.++.+|.||||||+-|+
T Consensus 89 p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl 168 (299)
T 4fol_A 89 PRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAI 168 (299)
T ss_dssp CCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHH
T ss_pred cceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHH
Confidence 110 0 00000 0000 000101112334333332211 1112456899999999999999
Q ss_pred HHHhhC--CCceEEEEEcCCCCCcccccccc--cccccCCCCCCccchhcCChhhhhccCC----CcEEEEecCCCCccC
Q 004067 654 ITLARF--PDVFQCAVSGAPVTSWDGYDTFY--TEKYMGLPSEDPVGYEYSSVMHHVHKMK----GKLLLVHGMIDENVH 725 (776)
Q Consensus 654 ~~a~~~--~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~P~lii~G~~D~~v~ 725 (776)
.++.++ |+.+.++.+.+|..+........ ...+++.. ...+...++...+.+.+ .++++-+|+.|....
T Consensus 169 ~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~---~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~~ 245 (299)
T 4fol_A 169 CGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEE---KAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLE 245 (299)
T ss_dssp HHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC--------CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTHH
T ss_pred HHHHhCCCCCceEEEEecccccCcccccccccccccccccc---hhhhhhcCHHHHHHhcccCCCCceEEEecCCCcchh
Confidence 999985 67889999999987654321110 11222322 23344455554444332 579999999998754
Q ss_pred hH-HHHHHHHHHHHCCCC--eEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 726 FR-HTARLINALVAARKP--YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 726 ~~-~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
.. ..+.+.+++++++.+ +++...||.+|.+.. ...+.+.-++|..++|
T Consensus 246 ~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~L 296 (299)
T 4fol_A 246 EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNL 296 (299)
T ss_dssp HHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHT
T ss_pred hhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhc
Confidence 32 236788888888765 788889998997633 4455677778887775
No 327
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.49 E-value=9.4e-12 Score=130.61 Aligned_cols=268 Identities=9% Similarity=0.028 Sum_probs=167.8
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.+..++|||||+.||.... + .+.+|+.++++....... .++....+++
T Consensus 21 ~V~~v~fs~dg~~la~g~~-~-----~~~iw~~~~~~~~~~~~~-------------------------~~~~~~~~~~- 68 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTL-K-----SFEIYNVHPVAHIMSQEM-------------------------RHLSKVRMLH- 68 (355)
T ss_dssp CCCEEEECTTSSEEEEECS-S-----EEEEEEETTEEEEEEEEC-------------------------SCCCEEEECT-
T ss_pred ceEEEEECCCCCEEEEEcC-C-----EEEEEecCCcceeeeeec-------------------------CCeEEEEEcC-
Confidence 3589999999999985433 2 367888887665333221 2456677888
Q ss_pred CCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCC-ce-eEEeeCCCC
Q 004067 136 SSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLIN-EQ-RQLTHGANG 211 (776)
Q Consensus 136 ~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g-~~-~~lt~~~~~ 211 (776)
+++.+++. .++.|.+||+.+++....+.. .. .+....|++++ ++...++.|++|++.++ +. ..+.. +
T Consensus 69 --~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~-~~-~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~-~-- 139 (355)
T 3vu4_A 69 --RTNYVAFVTGVKEVVHIWDDVKKQDVSRIKV-DA-PVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIR-F-- 139 (355)
T ss_dssp --TSSEEEEECSSTTEEEEEETTTTEEEEEEEC-SS-CEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEE-E--
T ss_pred --CCCEEEEEECCccEEEEEECCCCcEEEEEEC-CC-ceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEecc-C--
Confidence 88888765 445899999999887644443 22 47778888874 66667889999999887 22 22211 1
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
.....++| +.+++.+.... ..|.+||
T Consensus 140 ------------------~~~~~~s~--~~la~~sg~~~----------------------------------g~v~iwd 165 (355)
T 3vu4_A 140 ------------------GGVCEFSN--GLLVYSNEFNL----------------------------------GQIHITK 165 (355)
T ss_dssp ------------------EEEEEEET--TEEEEEESSCT----------------------------------TCEEEEE
T ss_pred ------------------CceEEEEc--cEEEEeCCCcC----------------------------------cEEEEEE
Confidence 11344666 66777521110 2378888
Q ss_pred cCCCc-----------------eEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEE-EEEEECCCCceEE
Q 004067 292 AAGGP-----------------VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLK-VLKFDIKTGQRKV 353 (776)
Q Consensus 292 ~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~-l~~~d~~~g~~~~ 353 (776)
+.+++ ...+ ..+...+..++|||||++|+..+ .+.. |.+||+.+++...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~---------~~h~~~v~~~~~s~~g~~l~s~s----~d~~~v~iwd~~~~~~~~ 232 (355)
T 3vu4_A 166 LQSSGSATTQDQGVQQKAILGKGVLI---------KAHTNPIKMVRLNRKSDMVATCS----QDGTIIRVFKTEDGVLVR 232 (355)
T ss_dssp CCC------------------CCEEE---------CCCSSCEEEEEECTTSSEEEEEE----TTCSEEEEEETTTCCEEE
T ss_pred CCCCCccccccccccccccCcccEEE---------EccCCceEEEEECCCCCEEEEEe----CCCCEEEEEECCCCcEEE
Confidence 88765 2333 56778899999999999888776 4555 9999999988655
Q ss_pred EEE---eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee---ecccc--------CCe------
Q 004067 354 ILV---EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL---GPITE--------GDW------ 413 (776)
Q Consensus 354 l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~---~~lt~--------~~~------ 413 (776)
... +....+.. .|+| ++.++++...++ .|.+|++..+.. ..+.. ..+
T Consensus 233 ~~~~g~h~~~v~~~---~~s~--------~~~~l~s~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T 3vu4_A 233 EFRRGLDRADVVDM---KWST--------DGSKLAVVSDKW--TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFK 299 (355)
T ss_dssp EEECTTCCSCEEEE---EECT--------TSCEEEEEETTC--EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEE
T ss_pred EEEcCCCCCcEEEE---EECC--------CCCEEEEEECCC--EEEEEEccCCCCcccccccceeeccccccccceeEEE
Confidence 444 33322211 2333 234566666666 888888765421 11110 000
Q ss_pred ------EEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 414 ------MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 414 ------~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
.....+.|++||+.|++-.. ++ ..++|.+..
T Consensus 300 ~~~~~~~~~~~~a~~~d~~~l~~~~~-dg--~~~~~~~~~ 336 (355)
T 3vu4_A 300 LSVDKHVRGCKIAWISESSLVVVWPH-TR--MIETFKVVF 336 (355)
T ss_dssp CCCCTTCCCCEEEESSSSEEEEEETT-TT--EEEEEEEEE
T ss_pred eccCCCCCceEEEEeCCCCEEEEEeC-CC--eEEEEEEEc
Confidence 00123469999987666654 33 377888775
No 328
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.48 E-value=6.5e-12 Score=134.10 Aligned_cols=224 Identities=9% Similarity=0.007 Sum_probs=144.1
Q ss_pred CCceeEcCC----C---CEEEEEeCCCCcCcceEEEEecCCCc------eEEeecCCCCCCCCCCCCHHHHHHHHHHHHh
Q 004067 57 PTSIGFSPD----D---NLITYLLSPDHSLSRKVFSFDPKTCK------QELVFSPPDGGLDENNISPEEKLRRERLRER 123 (776)
Q Consensus 57 ~~~~~~SpD----G---~~ia~~~~~~~~~~~~l~~~~~~~~~------~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~ 123 (776)
+..+.|+|| | +.|+..+.+ ..|++|++.+++ .+.+..+... ..
T Consensus 65 v~~~~~~~~~~~~g~~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~-------------------~~ 120 (397)
T 1sq9_A 65 LHHVDVLQAIERDAFELCLVATTSFS-----GDLLFYRITREDETKKVIFEKLDLLDSD-------------------MK 120 (397)
T ss_dssp EEEEEEEEEEETTTEEEEEEEEEETT-----SCEEEEEEEECTTTCCEEEEEECCSCTT-------------------GG
T ss_pred EEEEEEecccccCCccccEEEEEcCC-----CCEEEEEccCCcccccccceeecccccc-------------------cC
Confidence 478999999 9 988876552 369999999887 4445433210 00
Q ss_pred cCCeeeEEEe----ecCCCceE-EEEe-CCCcEEEEeCCC------Cccce-----ecC------CCCCCCccCceeCCC
Q 004067 124 GLGVTRYEWV----KTSSKKKI-IMVP-LPDGIYFQDLSC------SKPEL-----KLS------SSSCSPVIDPHLSSD 180 (776)
Q Consensus 124 ~~~~~~~~~s----p~~~dg~~-l~~~-~~~~l~~~d~~~------~~~~~-----~l~------~~~~~~~~~~~~SpD 180 (776)
...+....|+ | |++. |+.. .++.|++||+.+ ++... .+. ......+..+.|+||
T Consensus 121 ~~~v~~~~~~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 197 (397)
T 1sq9_A 121 KHSFWALKWGASNDR---LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 197 (397)
T ss_dssp GSCEEEEEEECCC-------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT
T ss_pred CCcEEEEEEeeccCC---CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC
Confidence 1468899999 9 9998 7765 788999999988 55442 221 112234788999999
Q ss_pred CCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEee
Q 004067 181 GTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMH 259 (776)
Q Consensus 181 g~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 259 (776)
| .|+.... +.|++|++.+++.......... . ......+..+.|+|||+.|+....+..
T Consensus 198 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------h-----~~~~~~i~~i~~~~~~~~l~~~~~d~~--------- 256 (397)
T 1sq9_A 198 G-LIATGFNNGTVQISELSTLRPLYNFESQHS------M-----INNSNSIRSVKFSPQGSLLAIAHDSNS--------- 256 (397)
T ss_dssp S-EEEEECTTSEEEEEETTTTEEEEEEECCC--------------CCCCCEEEEEECSSTTEEEEEEEETT---------
T ss_pred c-eEEEEeCCCcEEEEECCCCceeEEEecccc------c-----cccCCccceEEECCCCCEEEEEecCCC---------
Confidence 9 6666554 5799999998866544332000 0 000011457899999999887764311
Q ss_pred cCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCC-----CCCCCcceEEEEEeccCCeEEEEEEee
Q 004067 260 QGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT-----DQNYDEEYLARVNWMHGNILTAQVLNR 334 (776)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~SpDg~~l~~~~~~ 334 (776)
...|.+||+.+++....-.....+ ....+...+..++|+|||++|+...
T Consensus 257 ------------------------~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-- 310 (397)
T 1sq9_A 257 ------------------------FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-- 310 (397)
T ss_dssp ------------------------EEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE--
T ss_pred ------------------------CceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe--
Confidence 145899999887754432110000 0001567889999999999877665
Q ss_pred cCceEEEEEEECCCCceEEEEE
Q 004067 335 SQTKLKVLKFDIKTGQRKVILV 356 (776)
Q Consensus 335 ~~~~~~l~~~d~~~g~~~~l~~ 356 (776)
.+..|++||+.+++......
T Consensus 311 --~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 311 --WDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp --TTSEEEEEETTTTEEEEEEE
T ss_pred --CCCeEEEEEcCCCceeEEEe
Confidence 45579999999887655544
No 329
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.48 E-value=2.3e-12 Score=138.03 Aligned_cols=281 Identities=12% Similarity=0.054 Sum_probs=170.1
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCce-----EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQ-----ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~-----~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
..++++|+...+.+.... ...|.+|++..... ..+.. +...+..+.|
T Consensus 38 ~~~~~~~~~~~~~~~~~~----~g~i~v~~~~~~~~~~~~~~~~~~------------------------h~~~V~~~~~ 89 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASG----GGAFLVLPLGKTGRVDKNVPLVCG------------------------HTAPVLDIAW 89 (402)
T ss_dssp CSEEECSSEEEEEBCCSS----SCCEEEEETTCCEECCTTCCCBCC------------------------CSSCEEEEEE
T ss_pred CcEEECCCeEEEEEEEcC----CCEEEEEECccCCCCCCCCceEec------------------------CCCCEEEEEe
Confidence 446777777555443332 35799999865321 11221 1246889999
Q ss_pred eecCCCceEEEEe-CCCcEEEEeCCCCc-------cceecCCCCCCCccCceeCCCCC-EEEEEE-CCcEEEEecCCCce
Q 004067 133 VKTSSKKKIIMVP-LPDGIYFQDLSCSK-------PELKLSSSSCSPVIDPHLSSDGT-MIAFVR-DCELHVLNLLINEQ 202 (776)
Q Consensus 133 sp~~~dg~~l~~~-~~~~l~~~d~~~~~-------~~~~l~~~~~~~~~~~~~SpDg~-~la~~~-~~~l~~~~l~~g~~ 202 (776)
+| .|++.|+.. .++.|.+||+.++. ....+..+. ..+..+.|+|+|+ .|+..+ ++.|.+||+.+++.
T Consensus 90 ~p--~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 90 CP--HNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT-KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA 166 (402)
T ss_dssp CT--TCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS-SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE
T ss_pred CC--CCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC-CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc
Confidence 97 135556654 67889999999873 232444333 3488899999995 555555 35799999998876
Q ss_pred eEEee-CCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 203 RQLTH-GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 203 ~~lt~-~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
..... .... ..+..+.|+|||+.|+....+
T Consensus 167 ~~~~~~~~~~----------------~~v~~~~~~~~~~~l~~~~~d--------------------------------- 197 (402)
T 2aq5_A 167 VLTLGPDVHP----------------DTIYSVDWSRDGALICTSCRD--------------------------------- 197 (402)
T ss_dssp EEEECTTTCC----------------SCEEEEEECTTSSCEEEEETT---------------------------------
T ss_pred cEEEecCCCC----------------CceEEEEECCCCCEEEEEecC---------------------------------
Confidence 54331 1111 114578999999999877643
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCc-ceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce-EEEEE--e
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDE-EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILV--E 357 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~-~~l~~--~ 357 (776)
..|++||+.+++...... ..+. ..+..+.|+|||++++..... ..+..|.+||+.++.. ..+.. +
T Consensus 198 ---~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~g~~~-~~d~~i~iwd~~~~~~~~~~~~~~~ 266 (402)
T 2aq5_A 198 ---KRVRVIEPRKGTVVAEKD-------RPHEGTRPVHAVFVSEGKILTTGFSR-MSERQVALWDTKHLEEPLSLQELDT 266 (402)
T ss_dssp ---SEEEEEETTTTEEEEEEE-------CSSCSSSCCEEEECSTTEEEEEEECT-TCCEEEEEEETTBCSSCSEEEECCC
T ss_pred ---CcEEEEeCCCCceeeeec-------cCCCCCcceEEEEcCCCcEEEEeccC-CCCceEEEEcCccccCCceEEeccC
Confidence 358999999887654421 1222 236779999999877665322 2567899999988664 22222 1
Q ss_pred ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce--eeccccC--CeEEEEEEeecCCCcEEEEEEc
Q 004067 358 ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC--LGPITEG--DWMVEQIVGVNEASGQVYFTGT 433 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~--~~~lt~~--~~~~~~~~~~s~dg~~i~~~~~ 433 (776)
..... ...|+| ++..++.+...+| .|++|++.+++ ...+... ...+..+. |+|+++.++ .
T Consensus 267 ~~~v~---~~~~s~-------~~~~l~~~g~~dg--~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~-~sp~~~~~~---s 330 (402)
T 2aq5_A 267 SSGVL---LPFFDP-------DTNIVYLCGKGDS--SIRYFEITSEAPFLHYLSMFSSKESQRGMG-YMPKRGLEV---N 330 (402)
T ss_dssp CSSCE---EEEEET-------TTTEEEEEETTCS--CEEEEEECSSTTCEEEEEEECCSSCCSEEE-ECCGGGSCG---G
T ss_pred CCcee---EEEEcC-------CCCEEEEEEcCCC--eEEEEEecCCCcceEeecccccCCcccceE-Eecccccce---e
Confidence 11111 112222 2222444454566 78888887765 4444332 23445554 999998643 1
Q ss_pred cCCCceeeEEEEEe
Q 004067 434 LDGPLESHLYCAKL 447 (776)
Q Consensus 434 ~~~~~~~~l~~~~~ 447 (776)
.+ ....+|.+..
T Consensus 331 ~~--~~~~~~~l~~ 342 (402)
T 2aq5_A 331 KC--EIARFYKLHE 342 (402)
T ss_dssp GT--EEEEEEEEET
T ss_pred cc--eeEEEEEcCC
Confidence 22 2367887763
No 330
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.48 E-value=9.4e-12 Score=131.09 Aligned_cols=296 Identities=8% Similarity=0.021 Sum_probs=155.4
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcc--eEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSR--KVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~--~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
......++. +.+|+..-...... .+|.+|.++|+.+.+... . ......+.|||
T Consensus 5 ~~~~~~~~~-~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~----------------------~~~p~~l~~sp- 59 (361)
T 3scy_A 5 TDPSTTDSE-LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-E----------------------VANPSYLIPSA- 59 (361)
T ss_dssp -CCCGGGGE-EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-E----------------------CSCCCSEEECT-
T ss_pred CChhhCCCc-eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-c----------------------CCCCceEEECC-
Confidence 333344443 34455532222223 455556677887776642 1 13455678999
Q ss_pred CCCceEEEEeCC-----CcEEEEeCC--CCccceecCCCC--CCCccCceeCCCCCEEEEEEC--CcEEEEecCC-Ccee
Q 004067 136 SSKKKIIMVPLP-----DGIYFQDLS--CSKPELKLSSSS--CSPVIDPHLSSDGTMIAFVRD--CELHVLNLLI-NEQR 203 (776)
Q Consensus 136 ~~dg~~l~~~~~-----~~l~~~d~~--~~~~~~~l~~~~--~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~-g~~~ 203 (776)
||++|++... +.|.+|+++ +++.+ .+.... ......+.+ ||+.|+.... +.+.++++.+ +...
T Consensus 60 --dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~-~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~ 134 (361)
T 3scy_A 60 --DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH-LLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALL 134 (361)
T ss_dssp --TSSEEEEEECCSSTTCEEEEEEEETTTTEEE-EEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBC
T ss_pred --CCCEEEEEEccCCCCCcEEEEEEeCCCCcEE-EeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCc
Confidence 9999998744 567666554 46655 333211 111233444 9998877763 4688998874 3222
Q ss_pred EE----eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCC
Q 004067 204 QL----THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAG 279 (776)
Q Consensus 204 ~l----t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (776)
.+ ...+... . ...........++|||||++|++.....
T Consensus 135 ~~~~~~~~~g~~~-~-------~~~~~~~~~~~~~~spdg~~l~~~~~~~------------------------------ 176 (361)
T 3scy_A 135 PASDVIEFKGSGP-D-------KERQTMPHLHCVRITPDGKYLLADDLGT------------------------------ 176 (361)
T ss_dssp SCSEEEECCCCCS-C-------TTTCSSCCEEEEEECTTSSEEEEEETTT------------------------------
T ss_pred ccceeEEccCCCC-C-------ccccCCCcceEEEECCCCCEEEEEeCCC------------------------------
Confidence 11 1111100 0 0000011124588999999888754211
Q ss_pred CCCCeEEEEEEEcC--CC----c-eE------EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEEC
Q 004067 280 ASNVKVRLGVVSAA--GG----P-VS------WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI 346 (776)
Q Consensus 280 ~~~~~~~l~~~d~~--~~----~-~~------~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~ 346 (776)
..+++|+++ ++ + .. .+.. ........++|||||+.+++... ....|.+|++
T Consensus 177 -----~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~spdg~~l~v~~~---~~~~v~v~~~ 240 (361)
T 3scy_A 177 -----DQIHKFNINPNANADNKEKFLTKGTPEAFKV--------APGSGPRHLIFNSDGKFAYLINE---IGGTVIAFRY 240 (361)
T ss_dssp -----TEEEEEEECTTCCTTTCCCCEEEEEEEEEEC--------CTTCCEEEEEECTTSSEEEEEET---TTCEEEEEEE
T ss_pred -----CEEEEEEEcCCCCcccccceeecccccceec--------CCCCCCeEEEEcCCCCEEEEEcC---CCCeEEEEEe
Confidence 235566554 33 2 21 2221 22334567999999997776542 2345888888
Q ss_pred CCCceEEEEEeccC-c-ee-ecccccccCCCCccccCCeEEEEeccCCceEEEEEeC--CCceeeccccC--CeEEEEEE
Q 004067 347 KTGQRKVILVEELD-S-WV-NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDI--NGTCLGPITEG--DWMVEQIV 419 (776)
Q Consensus 347 ~~g~~~~l~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~--~g~~~~~lt~~--~~~~~~~~ 419 (776)
++|..+.+...... . .. ...-.|+| +++++|++.+.+...|.+|++ .+++.+.+... ...+..+
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~i~~sp--------dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~- 311 (361)
T 3scy_A 241 ADGMLDEIQTVAADTVNAQGSGDIHLSP--------DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNF- 311 (361)
T ss_dssp ETTEEEEEEEEESCSSCCCCEEEEEECT--------TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEE-
T ss_pred cCCceEEeEEEecCCCCCCCcccEEECC--------CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceE-
Confidence 88876655432211 0 00 00111222 233455555441235555554 45554333221 2223344
Q ss_pred eecCCCcEEEEEEccCCCceeeEEEEEeC
Q 004067 420 GVNEASGQVYFTGTLDGPLESHLYCAKLY 448 (776)
Q Consensus 420 ~~s~dg~~i~~~~~~~~~~~~~l~~~~~~ 448 (776)
.|+|||++||+.....+ .+.+|.++..
T Consensus 312 ~~spdg~~l~~~~~~~~--~v~v~~~d~~ 338 (361)
T 3scy_A 312 IITPNGKYLLVACRDTN--VIQIFERDQA 338 (361)
T ss_dssp EECTTSCEEEEEETTTT--EEEEEEECTT
T ss_pred EECCCCCEEEEEECCCC--CEEEEEEECC
Confidence 49999999888876544 4788888863
No 331
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.48 E-value=1.1e-11 Score=130.86 Aligned_cols=219 Identities=13% Similarity=0.003 Sum_probs=126.9
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecC-CCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPK-TCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~-~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
.+..++|||||++|+..... .|.+|+++ +|+..++..+.. ........|+|
T Consensus 41 ~~~~~a~spdg~~l~~~~~~------~v~~~~~~~~g~~~~~~~~~~----------------------~g~~~~~~~sp 92 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK------KWSSFAVKSPTEIVHEASHPI----------------------GGHPRANDADT 92 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT------EEEEEEEEETTEEEEEEEEEC----------------------CSSGGGGCTTS
T ss_pred CCcEEEECCCCCEEEEEccc------eEEEEEECCCCCEEEeeEeec----------------------CCCCccEEECC
Confidence 45889999999988755542 58888887 777655543211 01123457889
Q ss_pred cCCCceEE-EEe---------------CCCcEEEEeCCC-CccceecCC---CCCCCccCceeCCCCCEEEEEEC--CcE
Q 004067 135 TSSKKKII-MVP---------------LPDGIYFQDLSC-SKPELKLSS---SSCSPVIDPHLSSDGTMIAFVRD--CEL 192 (776)
Q Consensus 135 ~~~dg~~l-~~~---------------~~~~l~~~d~~~-~~~~~~l~~---~~~~~~~~~~~SpDg~~la~~~~--~~l 192 (776)
||++| ++. .++.+.+|+++. ++....+.. ........+.|||||+.|+.... +.|
T Consensus 93 ---dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v 169 (365)
T 1jof_A 93 ---NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKL 169 (365)
T ss_dssp ---CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred ---CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEE
Confidence 99963 332 356788888863 443312221 12234678999999998766543 469
Q ss_pred EEEecC-CCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcc
Q 004067 193 HVLNLL-INEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQE 271 (776)
Q Consensus 193 ~~~~l~-~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (776)
++++++ +|+.+.+...... ..+ .....++|||||+.|+......
T Consensus 170 ~~~~~~~~g~~~~~~~~~~~---~~g----------~~p~~~~~spdg~~l~v~~~~~---------------------- 214 (365)
T 1jof_A 170 WTHRKLASGEVELVGSVDAP---DPG----------DHPRWVAMHPTGNYLYALMEAG---------------------- 214 (365)
T ss_dssp EEEEECTTSCEEEEEEEECS---STT----------CCEEEEEECTTSSEEEEEETTT----------------------
T ss_pred EEEEECCCCCEEEeeeEecC---CCC----------CCCCEeEECCCCCEEEEEECCC----------------------
Confidence 999998 7876544221000 000 0034678999999887654221
Q ss_pred eecCCCCCCCCCeEEEEEEEcCCCceE----EEEcccCCCCCCCCcc------eEEEEE-eccCCeEEEEEEeecCc---
Q 004067 272 DHAYPFAGASNVKVRLGVVSAAGGPVS----WMDLQCGGTDQNYDEE------YLARVN-WMHGNILTAQVLNRSQT--- 337 (776)
Q Consensus 272 ~~~~~~~g~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~------~~~~~~-~SpDg~~l~~~~~~~~~--- 337 (776)
....++.++.++|+.. .+..-.. ....+.. ....++ |||||+.|+. ++++.+
T Consensus 215 -----------~~v~v~~~~~~~g~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~i~~~spdG~~l~v-~~~~~~~~~ 280 (365)
T 1jof_A 215 -----------NRICEYVIDPATHMPVYTHHSFPLIPP--GIPDRDPETGKGLYRADVCALTFSGKYMFA-SSRANKFEL 280 (365)
T ss_dssp -----------TEEEEEEECTTTCCEEEEEEEEESSCT--TCCCBCTTTSSBSEEEEEEEECTTSSEEEE-EEEESSTTS
T ss_pred -----------CeEEEEEEeCCCCcEEEccceEEcCCC--CcCCcccccccccccccEEEECCCCCEEEE-ECCCCCCCC
Confidence 1133444455566643 2221100 0001111 577899 9999997764 444422
Q ss_pred eEEEEEEECC-CCceEEE
Q 004067 338 KLKVLKFDIK-TGQRKVI 354 (776)
Q Consensus 338 ~~~l~~~d~~-~g~~~~l 354 (776)
...|.+|+++ +|+.+.+
T Consensus 281 ~~~i~v~~~~~~g~~~~~ 298 (365)
T 1jof_A 281 QGYIAGFKLRDCGSIEKQ 298 (365)
T ss_dssp CCEEEEEEECTTSCEEEE
T ss_pred CCeEEEEEECCCCCEEEe
Confidence 1257777775 6776653
No 332
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.48 E-value=1e-10 Score=129.10 Aligned_cols=356 Identities=12% Similarity=0.020 Sum_probs=206.1
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.|+.|...++|+.... ...|+++|.++++....... +.....+.+||
T Consensus 156 P~~~~~~~d~~~~~~V~~~~---~~~V~viD~~t~~v~~~i~~------------------------g~~p~~v~~Sp-- 206 (567)
T 1qks_A 156 PTQQMNDWDLENLFSVTLRD---AGQIALIDGSTYEIKTVLDT------------------------GYAVHISRLSA-- 206 (567)
T ss_dssp CSSCCSCCCGGGEEEEEETT---TTEEEEEETTTCCEEEEEEC------------------------SSCEEEEEECT--
T ss_pred ccccccccCCCceEEEEeCC---CCeEEEEECCCCeEEEEEeC------------------------CCCccceEECC--
Confidence 45677888877778887754 35899999999876433321 23456788999
Q ss_pred CCceEEEEe-CCCcEEEEeCC--CCccceecCCCCCCCccCceeC----CCCCEEEEEE--CCcEEEEecCCCceeEEee
Q 004067 137 SKKKIIMVP-LPDGIYFQDLS--CSKPELKLSSSSCSPVIDPHLS----SDGTMIAFVR--DCELHVLNLLINEQRQLTH 207 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~--~~~~~~~l~~~~~~~~~~~~~S----pDg~~la~~~--~~~l~~~~l~~g~~~~lt~ 207 (776)
||+++++. .++.|+++|+. +++....+..+. ....+.|| |||++++... .+.+.++|..+.+..+...
T Consensus 207 -DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 207 -SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp -TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred -CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC--CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 99998876 56689999995 555443444332 25678999 7999876654 3679999998887765433
Q ss_pred CCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEE
Q 004067 208 GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRL 287 (776)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l 287 (776)
..... ..+ ..+. . -.++.++..|+++..+++...+. .+|
T Consensus 284 ~~~~~--~~~-~~~~--p-~~rva~i~~s~~~~~~vv~~~~~-----------------------------------g~v 322 (567)
T 1qks_A 284 TRGMT--YDE-QEYH--P-EPRVAAILASHYRPEFIVNVKET-----------------------------------GKI 322 (567)
T ss_dssp CCEEC--TTT-CCEE--S-CCCEEEEEECSSSSEEEEEETTT-----------------------------------TEE
T ss_pred ccccc--ccc-cccc--C-CCceEEEEEcCCCCEEEEEecCC-----------------------------------CeE
Confidence 22100 000 0000 0 01234667788877655543211 346
Q ss_pred EEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeeccc
Q 004067 288 GVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHD 367 (776)
Q Consensus 288 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 367 (776)
.++|..+.+...+.. ........+..|+|||++++...+. ...|.++|+++++......-.....
T Consensus 323 ~~vd~~~~~~~~v~~-------i~~~~~~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~kl~~~i~vgg~~P----- 387 (567)
T 1qks_A 323 LLVDYTDLNNLKTTE-------ISAERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEGKLVAIEDTGGQTP----- 387 (567)
T ss_dssp EEEETTCSSEEEEEE-------EECCSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTTEEEEEEECSSSSB-----
T ss_pred EEEecCCCccceeee-------eeccccccCceECCCCCEEEEEeCC---CCeEEEEECCCCcEEEEEeccCcCC-----
Confidence 777776654222211 1122345578899999977666533 2348889999987654433101100
Q ss_pred ccccCCCCccc-c-CCeEEEEeccCCceEEEEEeCCCc--------eeeccccCCeEEEEEEeecCCCcEEEEEEccCCC
Q 004067 368 CFTPLDKGVTK-Y-SGGFIWASEKTGFRHLYLHDINGT--------CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP 437 (776)
Q Consensus 368 ~~~~~~~~~~~-~-~~~~~~~s~~~g~~~l~~~~~~g~--------~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~ 437 (776)
.| +.+..+ + +++-+|.+..-|...|.+++.+.+ ..+.+...... .-++..+||++++|+...-. |
T Consensus 388 --hp-g~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g-~~~i~~~p~~~~l~v~~~~~-~ 462 (567)
T 1qks_A 388 --HP-GRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG-SLFIKTHPNSQYLYVDATLN-P 462 (567)
T ss_dssp --CC-TTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTCSEEEEECTTC-S
T ss_pred --CC-ccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCC-CEEEEeCCCCCeEEEecCCC-C
Confidence 01 111111 1 224445444434447888887752 23344332111 11234799999988875321 1
Q ss_pred c---eeeEEEEEeCCC---CCCccccceeecC---------CCCeEEEEEcCCcCEEEEEeeC-CCCCCEEEEEEcCCCc
Q 004067 438 L---ESHLYCAKLYPD---WNHTLEAPVKLTN---------GKGKHVAVLDHNMRNFVDFHDS-LDSPPRILLCSLQDGS 501 (776)
Q Consensus 438 ~---~~~l~~~~~~~~---g~~~~~~~~~l~~---------~~~~~~~~~spdg~~l~~~~~~-~~~~~~i~~~~~~~~~ 501 (776)
. ...+..+++.+. |.. .....+.- ...+..+.|+|||+++.+...+ .+....|.++|..+++
T Consensus 463 ~~~~~~~v~v~d~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 463 EAEISGSVAVFDIKAMTGDGSD--PEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SHHHHTCEEEEEGGGCCCSSSC--CCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CcccCceEEEEECCcccccccC--CCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 1 124555665321 110 11133321 2235678999999998887643 2345689999999988
Q ss_pred eeEeec
Q 004067 502 LVLPLY 507 (776)
Q Consensus 502 ~~~~l~ 507 (776)
..+.+.
T Consensus 541 ~~~~i~ 546 (567)
T 1qks_A 541 LKHVIK 546 (567)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 666553
No 333
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.48 E-value=4.1e-13 Score=142.45 Aligned_cols=235 Identities=11% Similarity=0.029 Sum_probs=143.8
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCC--ccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCS--KPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLIN 200 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~--~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g 200 (776)
..+....|+| ||++|+.. .++.|++||+.++ +....+..+. ..+..++|+|||+.|+..+. +.|.+|++.++
T Consensus 12 ~~v~~~~~s~---~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 12 KPSYEHAFNS---QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHD-KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp SCCSCCEECS---SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCS-SCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred CcEEEEEECC---CCCEEEEecCCCEEEEEEccCCceEEEEEEecCC-ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 3578889999 99999987 7889999999987 3332444333 34888999999999998875 57999999988
Q ss_pred c-eeE-EeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCC
Q 004067 201 E-QRQ-LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 278 (776)
Q Consensus 201 ~-~~~-lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (776)
+ .+. ....... ..+..+.|+|||+.|+..+.+
T Consensus 88 ~~~~~~~~~~~~~----------------~~v~~~~~~~~~~~l~~~~~d------------------------------ 121 (377)
T 3dwl_C 88 GTWKQTLVLLRLN----------------RAATFVRWSPNEDKFAVGSGA------------------------------ 121 (377)
T ss_dssp -CCCCEEECCCCS----------------SCEEEEECCTTSSCCEEEESS------------------------------
T ss_pred CceeeeeEecccC----------------CceEEEEECCCCCEEEEEecC------------------------------
Confidence 7 111 1111111 114578899999999887643
Q ss_pred CCCCCeEEEEEEEcCCCc----eEEEEcccCCCCCCC-CcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce--
Q 004067 279 GASNVKVRLGVVSAAGGP----VSWMDLQCGGTDQNY-DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-- 351 (776)
Q Consensus 279 g~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~-- 351 (776)
..|.+||+++++ ...+ .. +...+..++|+|||+.++..+ .+..|.+||+.++..
T Consensus 122 ------~~i~iwd~~~~~~~~~~~~~---------~~~h~~~v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 122 ------RVISVCYFEQENDWWVSKHL---------KRPLRSTILSLDWHPNNVLLAAGC----ADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp ------SCEEECCC-----CCCCEEE---------CSSCCSCEEEEEECTTSSEEEEEE----SSSCEEEEEECCSSCC-
T ss_pred ------CeEEEEEECCcccceeeeEe---------ecccCCCeEEEEEcCCCCEEEEEe----CCCEEEEEEEEecccCC
Confidence 237888888876 3344 33 677899999999999887766 344588999864321
Q ss_pred -------------EEEE---EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-----eecccc
Q 004067 352 -------------KVIL---VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-----LGPITE 410 (776)
Q Consensus 352 -------------~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-----~~~lt~ 410 (776)
..+. .+...... -.|+| ++.++++...+| .|.+|++.+++ ...+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~sp--------~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~ 249 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVCAEYPSGGWVHA---VGFSP--------SGNALAYAGHDS--SVTIAYPSAPEQPPRALITVKL 249 (377)
T ss_dssp CCCSCSSCSCCCEEEEEECCCCSSSEEE---EEECT--------TSSCEEEEETTT--EEC-CEECSTTSCEEECCCEEC
T ss_pred CccccccccccchhhhhhcccCCceEEE---EEECC--------CCCEEEEEeCCC--cEEEEECCCCCCcceeeEeecC
Confidence 1111 11111110 11222 233555566667 88999987765 345565
Q ss_pred CCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 411 GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 411 ~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
+...+..+. |+++|+.|+ .+..++ ..+|...
T Consensus 250 ~~~~v~~~~-~s~~~~~l~-~~~~~~---~~~~~~~ 280 (377)
T 3dwl_C 250 SQLPLRSLL-WANESAIVA-AGYNYS---PILLQGN 280 (377)
T ss_dssp SSSCEEEEE-EEETTEEEE-EESSSS---EEEECCC
T ss_pred CCCceEEEE-EcCCCCEEE-EEcCCc---EEEEEeC
Confidence 665666665 999998654 443332 3455443
No 334
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.48 E-value=5e-11 Score=132.06 Aligned_cols=298 Identities=11% Similarity=0.028 Sum_probs=176.0
Q ss_pred EEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEec--CCCceeEE
Q 004067 130 YEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNL--LINEQRQL 205 (776)
Q Consensus 130 ~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l--~~g~~~~l 205 (776)
+.++| +|+.++.. .++.|.+||..+++....+..+.. ...++|||||++|+.... +.|.++|+ .+++...-
T Consensus 143 ~~~~p---~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 143 NDLDL---PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 217 (543)
T ss_dssp SCCCG---GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred cccCC---CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE
Confidence 34778 88766655 457899999999987645543332 567889999999887765 46999999 77765332
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECC----CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSL----DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp----Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
...+.. ...++||| ||++|+......
T Consensus 218 i~~g~~------------------p~~va~sp~~~~dg~~l~v~~~~~-------------------------------- 247 (543)
T 1nir_A 218 IKIGIE------------------ARSVESSKFKGYEDRYTIAGAYWP-------------------------------- 247 (543)
T ss_dssp EECCSE------------------EEEEEECCSTTCTTTEEEEEEEES--------------------------------
T ss_pred EecCCC------------------cceEEeCCCcCCCCCEEEEEEccC--------------------------------
Confidence 222211 34788999 999887765322
Q ss_pred CCeEEEEEEEcCCCceEE-EEcccCCC---CCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEe
Q 004067 282 NVKVRLGVVSAAGGPVSW-MDLQCGGT---DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 357 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~-l~~~~~~~---~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 357 (776)
..|.+||..+++... +... +.. ........+..+.+|||++.+++.. . ....|++||..+++...++.-
T Consensus 248 ---~~v~v~D~~t~~~~~~i~~~-g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-~--~~g~i~vvd~~~~~~l~~~~i 320 (543)
T 1nir_A 248 ---PQFAIMDGETLEPKQIVSTR-GMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-K--ETGKVLLVNYKDIDNLTVTSI 320 (543)
T ss_dssp ---SEEEEEETTTCCEEEEEECC-EECSSSCCEESCCCEEEEEECSSSSEEEEEE-T--TTTEEEEEECTTSSSCEEEEE
T ss_pred ---CeEEEEeccccccceeeccc-CcccCccccccCCceEEEEECCCCCEEEEEE-C--CCCeEEEEEecCCCcceeEEe
Confidence 347889998887644 3221 000 0001122577899999998655443 2 345799999987654322221
Q ss_pred ccCceeecccccccCCCCccccCCeEEE-EeccCCceEEEEEeCCCceeec-cccCC--eEEEEEEeecCCCcEEEEEEc
Q 004067 358 ELDSWVNLHDCFTPLDKGVTKYSGGFIW-ASEKTGFRHLYLHDINGTCLGP-ITEGD--WMVEQIVGVNEASGQVYFTGT 433 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~g~~~l~~~~~~g~~~~~-lt~~~--~~~~~~~~~s~dg~~i~~~~~ 433 (776)
....+. ..-.|+| ++++++ .+..++ .|.+||+.+++... +..+. ........++|+++.+|++..
T Consensus 321 ~~~~~~-~~~~~sp--------dg~~l~va~~~~~--~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 321 GAAPFL-HDGGWDS--------SHRYFMTAANNSN--KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp ECCSSC-CCEEECT--------TSCEEEEEEGGGT--EEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB
T ss_pred ccCcCc-cCceECC--------CCCEEEEEecCCC--eEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEecc
Confidence 112121 0111222 233344 444455 89999998886544 33221 100111225788777777765
Q ss_pred cCCCceeeEEEEEeCCCCC--CccccceeecCCC-CeEEEEEcCCcCEEEEEee-CCC--CCCEEEEEEcCCCcee
Q 004067 434 LDGPLESHLYCAKLYPDWN--HTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHD-SLD--SPPRILLCSLQDGSLV 503 (776)
Q Consensus 434 ~~~~~~~~l~~~~~~~~g~--~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~-~~~--~~~~i~~~~~~~~~~~ 503 (776)
... ..+.+|.++. .+. .....++.|.... +...+.++|||++|..... +++ ....|.++|..+++..
T Consensus 390 ~~d-~~V~v~d~~~--~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 390 LGD-GSISLIGTDP--KNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp SSS-SEEEEEECCT--TTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CCC-ceEEEEEeCC--CCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 321 2366766653 211 0012455666543 4567899999998876542 111 1237999999888754
No 335
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.47 E-value=3.2e-13 Score=143.02 Aligned_cols=224 Identities=11% Similarity=-0.011 Sum_probs=141.6
Q ss_pred ceEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh------CCcEEEEECCC
Q 004067 524 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS------KGILVWKLDNR 597 (776)
Q Consensus 524 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~------~G~~v~~~d~r 597 (776)
...+.+.. +|..+++....+.. ...+.||++||.+++.. .|..++..|++ .||.|+++|+|
T Consensus 85 ~~~~~~~i-~g~~i~~~~~~~~~-----~~~~pllllHG~~~s~~-------~~~~~~~~L~~~~~~~~~gf~vv~~Dlp 151 (408)
T 3g02_A 85 FPQFTTEI-EGLTIHFAALFSER-----EDAVPIALLHGWPGSFV-------EFYPILQLFREEYTPETLPFHLVVPSLP 151 (408)
T ss_dssp SCEEEEEE-TTEEEEEEEECCSC-----TTCEEEEEECCSSCCGG-------GGHHHHHHHHHHCCTTTCCEEEEEECCT
T ss_pred CCCEEEEE-CCEEEEEEEecCCC-----CCCCeEEEECCCCCcHH-------HHHHHHHHHhcccccccCceEEEEECCC
Confidence 33444444 89999999888654 23478999999887754 34455677776 69999999999
Q ss_pred CCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcCCCCCC-cEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcc
Q 004067 598 GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVG-HIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 676 (776)
Q Consensus 598 g~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~id~~-~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~ 676 (776)
|+|.|...... ......++.+.+..+.++. ..+ +++++||||||.+++.+|.++|+++...+...+.....
T Consensus 152 G~G~S~~~~~~------~~~~~~~~a~~~~~l~~~l--g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~ 223 (408)
T 3g02_A 152 GYTFSSGPPLD------KDFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPP 223 (408)
T ss_dssp TSTTSCCSCSS------SCCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCT
T ss_pred CCCCCCCCCCC------CCCCHHHHHHHHHHHHHHh--CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCc
Confidence 99988653210 1234666777666666653 334 89999999999999999999988666655544433210
Q ss_pred ------ccc-----------c------c--------------------------cccccc--CC-CCCCc----------
Q 004067 677 ------GYD-----------T------F--------------------------YTEKYM--GL-PSEDP---------- 694 (776)
Q Consensus 677 ------~~~-----------~------~--------------------------~~~~~~--~~-~~~~~---------- 694 (776)
.+. . . ..+.+. .. .....
T Consensus 224 ~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y~ 303 (408)
T 3g02_A 224 EGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYW 303 (408)
T ss_dssp TCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHH
T ss_pred ccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHHH
Confidence 000 0 0 000000 00 00000
Q ss_pred ---------cchhcC-Ch--hh-------hhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCC
Q 004067 695 ---------VGYEYS-SV--MH-------HVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 755 (776)
Q Consensus 695 ---------~~~~~~-~~--~~-------~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 755 (776)
..|.+. .. .. .+.++++|+++++|..|...++.. +.+.. ...+.+.+++++||..
T Consensus 304 ~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~---~~~~~---~~~~~~~~~~~gGHf~ 377 (408)
T 3g02_A 304 LTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRS---WIATT---GNLVFFRDHAEGGHFA 377 (408)
T ss_dssp HTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCHH---HHGGG---EEEEEEEECSSCBSCH
T ss_pred hhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccCcHH---HHHhc---CCeeEEEECCCCcCch
Confidence 000000 00 00 235567899999999997766642 22222 2336788999999976
Q ss_pred CCCCcHHHHHHHHHHHHHHh
Q 004067 756 RRHRDRIYMEERIWEFIERT 775 (776)
Q Consensus 756 ~~~~~~~~~~~~~~~fl~~~ 775 (776)
..+.++.+.+.+.+||++.
T Consensus 378 -~lE~Pe~~~~~l~~fl~~~ 396 (408)
T 3g02_A 378 -ALERPRELKTDLTAFVEQV 396 (408)
T ss_dssp -HHHCHHHHHHHHHHHHHHH
T ss_pred -hhhCHHHHHHHHHHHHHHH
Confidence 6788999999999999753
No 336
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.47 E-value=1.2e-11 Score=130.45 Aligned_cols=258 Identities=8% Similarity=-0.022 Sum_probs=139.3
Q ss_pred CeeeEEEeecCCCceEEEEeCCCcEEEEeCC-CCccceecCCCC-CCCccCceeCCCCCE-EEEEE--------------
Q 004067 126 GVTRYEWVKTSSKKKIIMVPLPDGIYFQDLS-CSKPELKLSSSS-CSPVIDPHLSSDGTM-IAFVR-------------- 188 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~-~~~~~~~l~~~~-~~~~~~~~~SpDg~~-la~~~-------------- 188 (776)
......|+| ||++|+....+.|.+|+++ +++.. .+.... ......+.|||||++ ++++.
T Consensus 41 ~~~~~a~sp---dg~~l~~~~~~~v~~~~~~~~g~~~-~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 41 PISWMTFDH---ERKNIYGAAMKKWSSFAVKSPTEIV-HEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CCSEEEECT---TSSEEEEEEBTEEEEEEEEETTEEE-EEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCcEEEECC---CCCEEEEEccceEEEEEECCCCCEE-EeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 456788999 9999887754489999987 66655 332111 112456899999997 44443
Q ss_pred -CCcEEEEecC-CCcee-EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCC
Q 004067 189 -DCELHVLNLL-INEQR-QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSV 265 (776)
Q Consensus 189 -~~~l~~~~l~-~g~~~-~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 265 (776)
++.+.+++++ +|+.. .+..... ++......++|||||++|+......
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~--------------~~~~~~~~~~~spdG~~l~~~~~~~---------------- 166 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEY--------------QENTGIHGMVFDPTETYLYSADLTA---------------- 166 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEEC--------------CTTCCEEEEEECTTSSEEEEEETTT----------------
T ss_pred CCceEEEEccCCCCcCcceEeeEEe--------------CCCCcceEEEECCCCCEEEEEcCCC----------------
Confidence 3457788876 45443 2221000 0001144788999999876543110
Q ss_pred CCCCcceecCCCCCCCCCeEEEEEEEcC-CCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEE
Q 004067 266 GSEAQEDHAYPFAGASNVKVRLGVVSAA-GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKF 344 (776)
Q Consensus 266 ~~~~~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~ 344 (776)
..|++|+++ +|+...+..-. ...+......++|||||+.++.... ....-.++.+
T Consensus 167 -------------------~~v~~~~~~~~g~~~~~~~~~----~~~~g~~p~~~~~spdg~~l~v~~~-~~~~v~v~~~ 222 (365)
T 1jof_A 167 -------------------NKLWTHRKLASGEVELVGSVD----APDPGDHPRWVAMHPTGNYLYALME-AGNRICEYVI 222 (365)
T ss_dssp -------------------TEEEEEEECTTSCEEEEEEEE----CSSTTCCEEEEEECTTSSEEEEEET-TTTEEEEEEE
T ss_pred -------------------CEEEEEEECCCCCEEEeeeEe----cCCCCCCCCEeEECCCCCEEEEEEC-CCCeEEEEEE
Confidence 247889988 77765432110 0112345778999999998776643 2244456666
Q ss_pred ECCCCceEE----EEEeccCceeeccc----ccccCCCCcc-ccC-CeEEEEeccCCc----eEEEEEeCC-Cceeec--
Q 004067 345 DIKTGQRKV----ILVEELDSWVNLHD----CFTPLDKGVT-KYS-GGFIWASEKTGF----RHLYLHDIN-GTCLGP-- 407 (776)
Q Consensus 345 d~~~g~~~~----l~~~~~~~~~~~~~----~~~~~~~~~~-~~~-~~~~~~s~~~g~----~~l~~~~~~-g~~~~~-- 407 (776)
|.++|+... +..-.. .+..... .+.+ ..+. +++ ++++|++++... ..|.+|+++ +++...
T Consensus 223 ~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~--~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~ 299 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPP-GIPDRDPETGKGLYR--ADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQL 299 (365)
T ss_dssp CTTTCCEEEEEEEEESSCT-TCCCBCTTTSSBSEE--EEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE
T ss_pred eCCCCcEEEccceEEcCCC-CcCCccccccccccc--ccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEee
Confidence 666776542 111100 0000000 0000 0112 222 335566654332 267777764 455443
Q ss_pred --cccCCeEEEEEEeecC---CCcEEEEEEccCCCceeeEEEEEe
Q 004067 408 --ITEGDWMVEQIVGVNE---ASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 408 --lt~~~~~~~~~~~~s~---dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
+......... ..|+| ||++|++.....+ .+.+|.++.
T Consensus 300 ~~~~~~~~~~~~-~a~sp~~~dg~~l~v~~~~~~--~v~v~~~~~ 341 (365)
T 1jof_A 300 FLSPTPTSGGHS-NAVSPCPWSDEWMAITDDQEG--WLEIYRWKD 341 (365)
T ss_dssp EEEECSSCCTTC-CCEEECTTCTTEEEEECSSSC--EEEEEEEET
T ss_pred eeeecCCCCccc-ceecCCCcCCCEEEEEEcCCC--eEEEEEEch
Confidence 2111111122 24788 8998877755433 378888874
No 337
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.1e-11 Score=134.40 Aligned_cols=251 Identities=9% Similarity=0.083 Sum_probs=159.8
Q ss_pred CCCceeEcC-CCCEEEEEeCCCCcCcceEEEEecCC---Cce---EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 004067 56 APTSIGFSP-DDNLITYLLSPDHSLSRKVFSFDPKT---CKQ---ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVT 128 (776)
Q Consensus 56 ~~~~~~~Sp-DG~~ia~~~~~~~~~~~~l~~~~~~~---~~~---~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 128 (776)
.+..++||| ||++|+..+.+ ..|.+||+.+ +.. .....+ ...+.
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~~~~~~~h------------------------~~~v~ 115 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQ-----GVIKIWNLKEIIVGEVYSSSLTYDC------------------------SSTVT 115 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETT-----SEEEEEEHHHHHTTCCCSCSEEEEC------------------------SSCEE
T ss_pred ceEEEEECCCCCCEEEEecCC-----ceEEEeECcccccCcccceeeeccC------------------------CCCEE
Confidence 358999999 99999876542 4699999876 431 111122 24788
Q ss_pred eEEEeecCCCceEEEEe-CCCcEEEEeCC---CCccceecCC--------C---CCCCccCce--eCCCCCEEEEEEC-C
Q 004067 129 RYEWVKTSSKKKIIMVP-LPDGIYFQDLS---CSKPELKLSS--------S---SCSPVIDPH--LSSDGTMIAFVRD-C 190 (776)
Q Consensus 129 ~~~~sp~~~dg~~l~~~-~~~~l~~~d~~---~~~~~~~l~~--------~---~~~~~~~~~--~SpDg~~la~~~~-~ 190 (776)
...|+| |++.|+.. .++.|.+||++ .++....+.. . ....+.... ++||++.|+.... +
T Consensus 116 ~~~~~~---~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 192 (437)
T 3gre_A 116 QITMIP---NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLS 192 (437)
T ss_dssp EEEECT---TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTS
T ss_pred EEEEeC---CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCC
Confidence 999999 99998876 67899999994 3333211110 0 111122223 6788998888876 5
Q ss_pred cEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCc
Q 004067 191 ELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQ 270 (776)
Q Consensus 191 ~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (776)
.|.+||+.+++.......... ...+..++|+|||+.|+..+.+
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h---------------~~~v~~~~~s~~~~~l~s~~~d---------------------- 235 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPR---------------HGAVSSICIDEECCVLILGTTR---------------------- 235 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGG---------------GCCEEEEEECTTSCEEEEEETT----------------------
T ss_pred eEEEEeCCCCeeeEEEccCCC---------------CCceEEEEECCCCCEEEEEcCC----------------------
Confidence 799999998876544332100 0115578999999998877643
Q ss_pred ceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEe----ccCCeEEEEEEeecCceEEEEEEEC
Q 004067 271 EDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNW----MHGNILTAQVLNRSQTKLKVLKFDI 346 (776)
Q Consensus 271 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----SpDg~~l~~~~~~~~~~~~l~~~d~ 346 (776)
..|.+||+.+++....-. ..+...+..+.| +|||+.++..+ .+..|.+||+
T Consensus 236 --------------g~i~iwd~~~~~~~~~~~-------~~~~~~v~~~~~~~~~s~~~~~l~s~~----~dg~i~iwd~ 290 (437)
T 3gre_A 236 --------------GIIDIWDIRFNVLIRSWS-------FGDHAPITHVEVCQFYGKNSVIVVGGS----SKTFLTIWNF 290 (437)
T ss_dssp --------------SCEEEEETTTTEEEEEEB-------CTTCEEEEEEEECTTTCTTEEEEEEES----TTEEEEEEET
T ss_pred --------------CeEEEEEcCCccEEEEEe-------cCCCCceEEEEeccccCCCccEEEEEc----CCCcEEEEEc
Confidence 247999999877644311 234557788844 45677666553 5678999999
Q ss_pred CCCceEEEEEecc-CceeecccccccCC-----------------CCccccCCeEEEEeccCCceEEEEEeCCCcee
Q 004067 347 KTGQRKVILVEEL-DSWVNLHDCFTPLD-----------------KGVTKYSGGFIWASEKTGFRHLYLHDINGTCL 405 (776)
Q Consensus 347 ~~g~~~~l~~~~~-~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~ 405 (776)
.+++......... ..+. ..|+|.+ ..+.++++.++++...+| .|++|++..++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~--~i~~wd~~~~~~ 362 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSM---EHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATS--SIVMFSLNELSS 362 (437)
T ss_dssp TTTEEEEEEESSSSCCCG---GGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGT--EEEEEETTCGGG
T ss_pred CCCcEEEEEEcCCCCCcc---ceecccccccccceecccccCCceEEEEECCceEEEecCCCC--eEEEEECCCccc
Confidence 9888655544321 1110 1122211 113444556777777777 999999887753
No 338
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.46 E-value=4.2e-12 Score=132.46 Aligned_cols=260 Identities=8% Similarity=-0.041 Sum_probs=163.6
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCc----cceecCCCCCCCccCceeCCCCC-EEEEEEC-CcEEEEec
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSK----PELKLSSSSCSPVIDPHLSSDGT-MIAFVRD-CELHVLNL 197 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~----~~~~l~~~~~~~~~~~~~SpDg~-~la~~~~-~~l~~~~l 197 (776)
..+....|+| ||+.|+.. .++.|++||+.+++ .. .+.... ..+..+.|+|||+ .|+.... +.|++|++
T Consensus 12 ~~v~~~~~s~---~~~~l~~~~~d~~v~iw~~~~~~~~~~~~-~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 12 DYISDIKIIP---SKSLLLITSWDGSLTVYKFDIQAKNVDLL-QSLRYK-HPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SCEEEEEEEG---GGTEEEEEETTSEEEEEEEETTTTEEEEE-EEEECS-SCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred CcEEEEEEcC---CCCEEEEEcCCCeEEEEEeCCCCccccce-eeeecC-CceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 4688999999 99998876 67899999999887 44 333333 3488899999999 8888774 57999999
Q ss_pred -CCCceeEEee--CCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 198 -LINEQRQLTH--GANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 198 -~~g~~~~lt~--~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
.+++...+.. ... .+..+.|+| ++.|+....+
T Consensus 87 ~~~~~~~~~~~~~~~~------------------~v~~l~~~~-~~~l~s~~~d-------------------------- 121 (342)
T 1yfq_A 87 IGSPSFQALTNNEANL------------------GICRICKYG-DDKLIAASWD-------------------------- 121 (342)
T ss_dssp SSSSSEEECBSCCCCS------------------CEEEEEEET-TTEEEEEETT--------------------------
T ss_pred ccCCceEeccccCCCC------------------ceEEEEeCC-CCEEEEEcCC--------------------------
Confidence 8887755543 211 145788999 8888876533
Q ss_pred CCCCCCCCCeEEEEEEEcCC---------CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEE
Q 004067 275 YPFAGASNVKVRLGVVSAAG---------GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFD 345 (776)
Q Consensus 275 ~~~~g~~~~~~~l~~~d~~~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d 345 (776)
..|.+||+.+ ++.... ..+...+..+.|+|++ ++... .+..|.+||
T Consensus 122 ----------~~i~iwd~~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~--l~~~~----~d~~i~i~d 176 (342)
T 1yfq_A 122 ----------GLIEVIDPRNYGDGVIAVKNLNSNN---------TKVKNKIFTMDTNSSR--LIVGM----NNSQVQWFR 176 (342)
T ss_dssp ----------SEEEEECHHHHTTBCEEEEESCSSS---------SSSCCCEEEEEECSSE--EEEEE----STTEEEEEE
T ss_pred ----------CeEEEEcccccccccccccCCeeeE---------EeeCCceEEEEecCCc--EEEEe----CCCeEEEEE
Confidence 3478888765 332111 2356678899999998 44443 344699999
Q ss_pred CCC-Cce--EEEEEeccCceeecccccccCCCCccccC--CeEEEEeccCCceEEEEEeCCCc-------eeeccccCCe
Q 004067 346 IKT-GQR--KVILVEELDSWVNLHDCFTPLDKGVTKYS--GGFIWASEKTGFRHLYLHDINGT-------CLGPITEGDW 413 (776)
Q Consensus 346 ~~~-g~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~g~~~l~~~~~~g~-------~~~~lt~~~~ 413 (776)
+.+ +.. ......... .. ..+.+.+ +.++++...+| .+.+|+.+.+ ....+..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~i----------~~i~~~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 177 LPLCEDDNGTIEESGLKY-QI----------RDVALLPKEQEGYACSSIDG--RVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp SSCCTTCCCEEEECSCSS-CE----------EEEEECSGGGCEEEEEETTS--EEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred CCccccccceeeecCCCC-ce----------eEEEECCCCCCEEEEEecCC--cEEEEEEcCCCcccccccceeeecccc
Confidence 987 553 222211111 00 0112222 33566666677 6666665543 2333333322
Q ss_pred ---------EEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC-CC-eEEEEEcCCcCEEEEE
Q 004067 414 ---------MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-KG-KHVAVLDHNMRNFVDF 482 (776)
Q Consensus 414 ---------~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~-~~-~~~~~~spdg~~l~~~ 482 (776)
.+..+ .|+|+|+.|+..+ .++. +.+|.+. .+. .+..+... .+ +..+. |||+.|+..
T Consensus 244 ~~~~~~~~~~i~~~-~~s~~~~~l~~~~-~dg~--i~vwd~~---~~~----~~~~~~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 244 NLKDTNLAYPVNSI-EFSPRHKFLYTAG-SDGI--ISCWNLQ---TRK----KIKNFAKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp CTTCCSSCCCEEEE-EECTTTCCEEEEE-TTSC--EEEEETT---TTE----EEEECCCCSSSEEEEEE--ECSSEEEEE
T ss_pred cccccccceeEEEE-EEcCCCCEEEEec-CCce--EEEEcCc---cHh----HhhhhhcccCCCceEec--CCCCeEEEE
Confidence 45555 4999999765444 3432 6666554 232 34555554 33 44555 999988887
Q ss_pred eeC
Q 004067 483 HDS 485 (776)
Q Consensus 483 ~~~ 485 (776)
...
T Consensus 311 s~D 313 (342)
T 1yfq_A 311 TSD 313 (342)
T ss_dssp EEC
T ss_pred ecC
Confidence 654
No 339
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.46 E-value=4.3e-11 Score=122.87 Aligned_cols=267 Identities=9% Similarity=-0.022 Sum_probs=167.8
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.| |||++|+..+.+ ..|.+||+.+++........ ...+....|+|
T Consensus 21 v~~~~~-~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~-----------------------~~~v~~~~~~~-- 69 (313)
T 3odt_A 21 VRDVVA-VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYTG-----------------------QGFLNSVCYDS-- 69 (313)
T ss_dssp EEEEEE-EETTEEEEEETT-----SEEEEEEESSSEEEEEEEEC-----------------------SSCEEEEEEET--
T ss_pred cEEEEe-cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeecC-----------------------CccEEEEEECC--
Confidence 478889 999999866542 46999999888764444211 24688999999
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCcc---ceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCC
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKP---ELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~ 211 (776)
||+.|+.. .++.|.+|++..... ...+.... ..+..+.| +++.++.... +.|.+|+ .++..........
T Consensus 70 -~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~ 143 (313)
T 3odt_A 70 -EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQ-GNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA 143 (313)
T ss_dssp -TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCS-SCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS
T ss_pred -CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcc-cCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC
Confidence 99999876 778899999876532 21333322 23555666 7778877765 4688998 3333222222111
Q ss_pred CceecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVV 290 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~ 290 (776)
.+..+.|+| +++.|+....+ ..|.+|
T Consensus 144 -----------------~v~~~~~~~~~~~~l~~~~~d------------------------------------~~i~i~ 170 (313)
T 3odt_A 144 -----------------SVWDAKVVSFSENKFLTASAD------------------------------------KTIKLW 170 (313)
T ss_dssp -----------------CEEEEEEEETTTTEEEEEETT------------------------------------SCEEEE
T ss_pred -----------------ceeEEEEccCCCCEEEEEECC------------------------------------CCEEEE
Confidence 134667877 88888776533 236888
Q ss_pred EcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEe-ccCceeeccccc
Q 004067 291 SAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE-ELDSWVNLHDCF 369 (776)
Q Consensus 291 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~~~~ 369 (776)
|.. .....+. ..+...+..+.|+|+++ ++... .+..|.+||+.+++....... ......
T Consensus 171 d~~-~~~~~~~--------~~~~~~i~~~~~~~~~~-~~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~i~~------ 230 (313)
T 3odt_A 171 QND-KVIKTFS--------GIHNDVVRHLAVVDDGH-FISCS----NDGLIKLVDMHTGDVLRTYEGHESFVYC------ 230 (313)
T ss_dssp ETT-EEEEEEC--------SSCSSCEEEEEEEETTE-EEEEE----TTSEEEEEETTTCCEEEEEECCSSCEEE------
T ss_pred ecC-ceEEEEe--------ccCcccEEEEEEcCCCe-EEEcc----CCCeEEEEECCchhhhhhhhcCCceEEE------
Confidence 822 2222221 22566789999999998 55444 345699999998876554442 222111
Q ss_pred ccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 370 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 370 ~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
+.+.+++.+++...+| .|++|++..++. ..+..+...+..+. |+++|+ ++ .+..++. +.+|.+.
T Consensus 231 ------~~~~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~i~~~~-~~~~~~-~~-~~~~dg~--i~iw~~~ 295 (313)
T 3odt_A 231 ------IKLLPNGDIVSCGEDR--TVRIWSKENGSLKQVITLPAISIWSVD-CMSNGD-II-VGSSDNL--VRIFSQE 295 (313)
T ss_dssp ------EEECTTSCEEEEETTS--EEEEECTTTCCEEEEEECSSSCEEEEE-ECTTSC-EE-EEETTSC--EEEEESC
T ss_pred ------EEEecCCCEEEEecCC--EEEEEECCCCceeEEEeccCceEEEEE-EccCCC-EE-EEeCCCc--EEEEeCC
Confidence 1222333455555666 899999876654 44555555566654 999998 33 3444433 6777765
No 340
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.45 E-value=6e-12 Score=131.64 Aligned_cols=124 Identities=14% Similarity=0.175 Sum_probs=84.6
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.+..++|||||++++.....+ ..|+++|+++++.......... +. .....+..+.|+|
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~----~~i~~~d~~t~~~~~~~~~~~~--------~~---------~~~~~~~~~~~sp- 101 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHY----GDIYGIDLDTCKNTFHANLSSV--------PG---------EVGRSMYSFAISP- 101 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTT----TEEEEEETTTTEEEEEEESCCS--------TT---------EEEECSSCEEECT-
T ss_pred CCceeEECCCCCEEEEEeCCC----CcEEEEeCCCCcEEEEEEcccc--------cc---------cccccccceEECC-
Confidence 358899999999887665433 5799999999886544421110 00 0011256789999
Q ss_pred CCCceEEEEeC-------------CCcEEEEeCCCCccceec--CCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCC
Q 004067 136 SSKKKIIMVPL-------------PDGIYFQDLSCSKPELKL--SSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLIN 200 (776)
Q Consensus 136 ~~dg~~l~~~~-------------~~~l~~~d~~~~~~~~~l--~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g 200 (776)
||++|++.. .+.|++||+++++....+ ...+. .+..++|||||+ +|+..++|+++|++++
T Consensus 102 --dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~--l~~~~~~i~~~d~~~~ 176 (349)
T 1jmx_B 102 --DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QVYLMRAADDGS--LYVAGPDIYKMDVKTG 176 (349)
T ss_dssp --TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-SCCCEEECTTSC--EEEESSSEEEECTTTC
T ss_pred --CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-cccceeECCCCc--EEEccCcEEEEeCCCC
Confidence 999999875 478999999886543111 11222 356677999999 4556778999999998
Q ss_pred ceeEEe
Q 004067 201 EQRQLT 206 (776)
Q Consensus 201 ~~~~lt 206 (776)
+.....
T Consensus 177 ~~~~~~ 182 (349)
T 1jmx_B 177 KYTVAL 182 (349)
T ss_dssp CEEEEE
T ss_pred ceeccc
Confidence 866543
No 341
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.1e-11 Score=131.18 Aligned_cols=202 Identities=10% Similarity=0.091 Sum_probs=137.4
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+..+.+ ..|.+|++.++..+.+.... .+...+..+.|+|
T Consensus 14 v~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~---------------------~h~~~v~~~~~~~-- 65 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLT---------------------GHEGPVWRVDWAH-- 65 (379)
T ss_dssp EEEEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEEEEEC---------------------CCSSCEEEEEECC--
T ss_pred EEEEEEcCCCCEEEEEECC-----CcEEEEecCCCcceeeeEec---------------------CCCCcEEEEEeCC--
Confidence 4789999999999966542 35999999855433322110 0124688999998
Q ss_pred CC--ceEEEEe-CCCcEEEEeCCCCc--cceecCCCCCCCccCceeCCC--CCEEEEEEC-CcEEEEecCCCce-eEEee
Q 004067 137 SK--KKIIMVP-LPDGIYFQDLSCSK--PELKLSSSSCSPVIDPHLSSD--GTMIAFVRD-CELHVLNLLINEQ-RQLTH 207 (776)
Q Consensus 137 ~d--g~~l~~~-~~~~l~~~d~~~~~--~~~~l~~~~~~~~~~~~~SpD--g~~la~~~~-~~l~~~~l~~g~~-~~lt~ 207 (776)
+ ++.|+.. .++.|.+||+.+++ ....+.... ..+..+.|+|+ |+.|+.... +.|.+|++.++.. ..+..
T Consensus 66 -~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 143 (379)
T 3jrp_A 66 -PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS-ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 143 (379)
T ss_dssp -GGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE
T ss_pred -CCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCC-cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe
Confidence 7 8888876 67899999999986 321333333 34888999999 998888875 5799999988732 22221
Q ss_pred CCCCCceecCCcccceecccCCcceEEECC-------------CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 208 GANGNTVTHGLAEYIAQEEMDRKTGYWWSL-------------DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-------------Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
.... ..+..+.|+| |++.|+....+
T Consensus 144 ~~~~----------------~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------------------- 181 (379)
T 3jrp_A 144 DAHA----------------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-------------------------- 181 (379)
T ss_dssp ECCT----------------TCEEEEEECCCC----------CTTCEEEEEETT--------------------------
T ss_pred cCCC----------------CceEEEEEcCccccccccccCCCCCCEEEEEeCC--------------------------
Confidence 1110 1145788999 68888776643
Q ss_pred CCCCCCCCCeEEEEEEEcCCCceE--EEEcccCCCCCCCCcceEEEEEeccC---CeEEEEEEeecCceEEEEEEECCCC
Q 004067 275 YPFAGASNVKVRLGVVSAAGGPVS--WMDLQCGGTDQNYDEEYLARVNWMHG---NILTAQVLNRSQTKLKVLKFDIKTG 349 (776)
Q Consensus 275 ~~~~g~~~~~~~l~~~d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~SpD---g~~l~~~~~~~~~~~~l~~~d~~~g 349 (776)
..|++||+.+++.. .+.. +..+...+..++|+|| ++.++... .+..|.+||+.++
T Consensus 182 ----------g~i~i~d~~~~~~~~~~~~~------~~~h~~~v~~~~~sp~~~~~~~l~s~~----~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 182 ----------NLVKIWKYNSDAQTYVLEST------LEGHSDWVRDVAWSPTVLLRSYLASVS----QDRTCIIWTQDNE 241 (379)
T ss_dssp ----------SCEEEEEEETTTTEEEEEEE------ECCCSSCEEEEEECCCCSSSEEEEEEE----TTSCEEEEEESST
T ss_pred ----------CeEEEEEecCCCcceeeEEE------EecccCcEeEEEECCCCCCCCeEEEEe----CCCEEEEEeCCCC
Confidence 23788888766422 1111 1456678999999999 78777665 3445899999887
Q ss_pred c
Q 004067 350 Q 350 (776)
Q Consensus 350 ~ 350 (776)
.
T Consensus 242 ~ 242 (379)
T 3jrp_A 242 Q 242 (379)
T ss_dssp T
T ss_pred C
Confidence 5
No 342
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=3.8e-10 Score=118.45 Aligned_cols=292 Identities=12% Similarity=0.066 Sum_probs=166.4
Q ss_pred CceEEEEeCC--C----cEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE-----------CCcEEEEecCCC
Q 004067 138 KKKIIMVPLP--D----GIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR-----------DCELHVLNLLIN 200 (776)
Q Consensus 138 dg~~l~~~~~--~----~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~-----------~~~l~~~~l~~g 200 (776)
|++++++... . .|+++|..+++....+..+. .. .+.+||||+.+++.. ++.|.++|+++.
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~--~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF--LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC--CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 8877665521 2 78999999988764444432 23 899999999987774 234889999887
Q ss_pred ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 201 EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 201 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
+...-..-+.......+ .....++|||||++|++......
T Consensus 108 ~~~~~i~~~~~~~~~~g----------~~p~~~~~spDG~~l~v~n~~~~------------------------------ 147 (373)
T 2mad_H 108 LPIADIELPDAPRFDVG----------PYSWMNANTPNNADLLFFQFAAG------------------------------ 147 (373)
T ss_pred cEEEEEECCCccccccC----------CCccceEECCCCCEEEEEecCCC------------------------------
Confidence 65432222100000000 00236789999999987653211
Q ss_pred CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccC
Q 004067 281 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD 360 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 360 (776)
..|.++| ++++....-++ .+. .+.+.|+++..++... .+..+..+|. +++........ .
T Consensus 148 ----~~v~viD-~t~~~~~~~i~------~~~-----~~~~~~~~~~~~~~~~---~dg~~~~vd~-~g~~~~~~~~~-~ 206 (373)
T 2mad_H 148 ----PAVGLVV-QGGSSDDQLLS------SPT-----CYHIHPGAPSTFYLLC---AQGGLAKTDH-AGGAAGAGLVG-A 206 (373)
T ss_pred ----CeEEEEE-CCCCEEeEEcC------CCc-----eEEEEeCCCceEEEEc---CCCCEEEEEC-CCcEEEEEecc-c
Confidence 3478899 88876432021 111 1445677654443322 2344667777 66544221100 0
Q ss_pred ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeecccc----------CCeEE--EEEEeecCCCcEE
Q 004067 361 SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITE----------GDWMV--EQIVGVNEASGQV 428 (776)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~----------~~~~~--~~~~~~s~dg~~i 428 (776)
.+....+.+.. .....++++++|.+ ..+ +++++|..++..+.+.. ..+.. .....+++|++++
T Consensus 207 ~~~~~~p~~~~--~~~~~~~~~~~~~~-~~~--~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~l 281 (373)
T 2mad_H 207 MLTAAQNLLTQ--PAQANKSGRIVWPV-YSG--KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGI 281 (373)
T ss_pred cccCCcceeec--ceeEecCCEEEEEc-CCc--eEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEE
Confidence 00000000000 00122345667766 344 89999987654332221 01111 1234589999999
Q ss_pred EEEEccCC-----CceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 004067 429 YFTGTLDG-----PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 503 (776)
Q Consensus 429 ~~~~~~~~-----~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~ 503 (776)
|+...... .....|+.+++.+ ++ ...++..+.....+.|||||++++|+.+... ..|.++|..+++.+
T Consensus 282 yV~~~~~~~~~~~~~~~~V~VID~~t-~~----vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~--~~V~ViD~~t~~vv 354 (373)
T 2mad_H 282 YLLTSEQSAWKLHAAAKEVTSVTGLV-GQ----TSSQISLGHDVDAISVAQDGGPDLYALSAGT--EVLHIYDAGAGDQD 354 (373)
T ss_pred EEEeccCCcccccCCCCeEEEEECCC-CE----EEEEEECCCCcCeEEECCCCCeEEEEEcCCC--CeEEEEECCCCCEE
Confidence 98764311 0124789999842 22 4566766556778999999997888766322 47999999998876
Q ss_pred Ee
Q 004067 504 LP 505 (776)
Q Consensus 504 ~~ 505 (776)
+.
T Consensus 355 ~~ 356 (373)
T 2mad_H 355 QS 356 (373)
T ss_pred ee
Confidence 65
No 343
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.43 E-value=3.9e-11 Score=122.44 Aligned_cols=199 Identities=10% Similarity=0.072 Sum_probs=131.0
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCc---eEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEe
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCK---QELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWV 133 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s 133 (776)
+..++|||||++||-.+.+ ..|.+|+++++. ...+..|. ..+....|+
T Consensus 12 V~~~~~s~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~------------------------~~V~~v~~s 62 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHE------------------------GPVWRVDWA 62 (297)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCS------------------------SCEEEEEEC
T ss_pred eEEEEECCCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEcccc------------------------CCeEEEEec
Confidence 4788999999999966542 469999997543 23444332 368899998
Q ss_pred ecCCC--ceEEEEe-CCCcEEEEeCCCCccc--eecCCCCCCCccCceeCCC--CCEEEEEEC-CcEEEEecCCCcee-E
Q 004067 134 KTSSK--KKIIMVP-LPDGIYFQDLSCSKPE--LKLSSSSCSPVIDPHLSSD--GTMIAFVRD-CELHVLNLLINEQR-Q 204 (776)
Q Consensus 134 p~~~d--g~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~SpD--g~~la~~~~-~~l~~~~l~~g~~~-~ 204 (776)
| + |+.|+.. .++.|.+||+.+++.. ..+.... ..+..+.|+|+ |+.|+..+. +.|.+|++.++... .
T Consensus 63 ~---~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 63 H---PKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHS-ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp C---GGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCS-SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC
T ss_pred C---CCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCC-CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee
Confidence 7 5 7777765 7889999999987532 1233233 34788999998 888887765 57999999876321 1
Q ss_pred EeeCCCCCceecCCcccceecccCCcceEEECCCC-------------CeEEEEEecCCCCCeEEEeecCCCCCCCCCcc
Q 004067 205 LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDS-------------KFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQE 271 (776)
Q Consensus 205 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg-------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (776)
....+.. ..+..++|+|++ +.|+..+.|
T Consensus 139 ~~~~~h~----------------~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D----------------------- 179 (297)
T 2pm7_B 139 IIIDAHA----------------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----------------------- 179 (297)
T ss_dssp EEEECCS----------------SCEEEEEECCCC------------CCEEEEEETT-----------------------
T ss_pred eeeeccc----------------CccceEeecCCcccccccCCCCCCcceEEEEcCC-----------------------
Confidence 1111110 114578899974 455554432
Q ss_pred eecCCCCCCCCCeEEEEEEEcCCCceE--EEEcccCCCCCCCCcceEEEEEeccCC---eEEEEEEeecCceEEEEEEEC
Q 004067 272 DHAYPFAGASNVKVRLGVVSAAGGPVS--WMDLQCGGTDQNYDEEYLARVNWMHGN---ILTAQVLNRSQTKLKVLKFDI 346 (776)
Q Consensus 272 ~~~~~~~g~~~~~~~l~~~d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~~l~~~d~ 346 (776)
..|.+||+.+++.. .+.. +..+...+..++|+||+ ++|+..+ .+..|.+||+
T Consensus 180 -------------~~v~lwd~~~~~~~~~~~~~------l~~H~~~V~~v~~sp~~~~~~~las~s----~D~~v~iWd~ 236 (297)
T 2pm7_B 180 -------------NLVKIWKYNSDAQTYVLEST------LEGHSDWVRDVAWSPTVLLRSYMASVS----QDRTCIIWTQ 236 (297)
T ss_dssp -------------SCEEEEEEETTTTEEEEEEE------ECCCSSCEEEEEECCCCSSSEEEEEEE----TTSCEEEEEE
T ss_pred -------------CcEEEEEEcCCCceEEEEEE------ecCCCCceEEEEECCCCCCceEEEEEE----CCCcEEEEEe
Confidence 23788888776521 1111 14677789999999995 6666655 3456888998
Q ss_pred CCCc
Q 004067 347 KTGQ 350 (776)
Q Consensus 347 ~~g~ 350 (776)
+++.
T Consensus 237 ~~~~ 240 (297)
T 2pm7_B 237 DNEQ 240 (297)
T ss_dssp SSTT
T ss_pred CCCC
Confidence 7643
No 344
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.43 E-value=2.5e-12 Score=125.79 Aligned_cols=208 Identities=17% Similarity=0.098 Sum_probs=129.4
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCc--EEEEECCCCCCCC---chhh---hhhh-----hhc-cCC--c
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI--LVWKLDNRGTARR---GLKF---EASI-----KHN-CGR--I 617 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rg~g~~---~~~~---~~~~-----~~~-~~~--~ 617 (776)
.+.|||+||..++.. .|..+++.|++.|| .|+.+|.+++|.. |... ..+. ... .+. .
T Consensus 6 ~~pvvliHG~~~~~~-------~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~ 78 (249)
T 3fle_A 6 TTATLFLHGYGGSER-------SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKE 78 (249)
T ss_dssp CEEEEEECCTTCCGG-------GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHH
T ss_pred CCcEEEECCCCCChh-------HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHH
Confidence 367888999776644 45667899999986 5888888777642 1100 0000 000 001 1
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCC-----ceEEEEEcCCCCCcc-cccccccc-cc--cC
Q 004067 618 DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWD-GYDTFYTE-KY--MG 688 (776)
Q Consensus 618 ~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~-----~~~~~v~~~~~~~~~-~~~~~~~~-~~--~~ 688 (776)
..+++.++++.+.++.. ..++.++||||||.+++.++.++|. +++.+|.+++..+.. .....-.. ++ .+
T Consensus 79 ~~~~l~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g 156 (249)
T 3fle_A 79 NAYWIKEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQG 156 (249)
T ss_dssp HHHHHHHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTC
T ss_pred HHHHHHHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccC
Confidence 25567777888877653 4589999999999999999998763 688888776543321 11100000 11 11
Q ss_pred CCCCCccchhcC-ChhhhhccCCCcEEEEecC------CCCccChHHHHHHHHHHHHCCCCeEEEEecC--CCCCCCCCC
Q 004067 689 LPSEDPVGYEYS-SVMHHVHKMKGKLLLVHGM------IDENVHFRHTARLINALVAARKPYEILIFPD--ERHMPRRHR 759 (776)
Q Consensus 689 ~~~~~~~~~~~~-~~~~~~~~i~~P~lii~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~~~~~ 759 (776)
.|......|... .....+++.+.|+|.|+|. .|..||...++.+...++......+.+++.| +.|.....
T Consensus 157 ~p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~- 235 (249)
T 3fle_A 157 KPSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHE- 235 (249)
T ss_dssp CBSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGG-
T ss_pred CCcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhcccc-
Confidence 222212222221 1122344456799999998 6999999988877776665556666677765 88987443
Q ss_pred cHHHHHHHHHHHH
Q 004067 760 DRIYMEERIWEFI 772 (776)
Q Consensus 760 ~~~~~~~~~~~fl 772 (776)
..++.+.+.+||
T Consensus 236 -n~~V~~~I~~FL 247 (249)
T 3fle_A 236 -NKDVANEIIQFL 247 (249)
T ss_dssp -CHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHh
Confidence 457888888887
No 345
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.42 E-value=4.4e-13 Score=133.11 Aligned_cols=208 Identities=14% Similarity=0.009 Sum_probs=121.6
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCCcE---E----------EEECCCCCCCCchhhhhhhh--hccC-Ccc
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL---V----------WKLDNRGTARRGLKFEASIK--HNCG-RID 618 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~---v----------~~~d~rg~g~~~~~~~~~~~--~~~~-~~~ 618 (776)
+.|||+||.+++.. .|..++..|+++++. + +.+|.++.+....+...... .... ...
T Consensus 4 ~pvvllHG~~~~~~-------~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (254)
T 3ds8_A 4 IPIILIHGSGGNAS-------SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDW 76 (254)
T ss_dssp CCEEEECCTTCCTT-------TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHH
T ss_pred CCEEEECCCCCCcc-------hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHH
Confidence 46789999876643 355678888887653 2 33443222211111000000 0000 112
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCC-----ceEEEEEcCCCCCcccccccccc-cccCCCCC
Q 004067 619 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDGYDTFYTE-KYMGLPSE 692 (776)
Q Consensus 619 ~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~ 692 (776)
.+++.++++.+.++.. ..++.++||||||.+++.++.++|+ .++++|++++..+.......... .+.+.|..
T Consensus 77 a~~l~~~i~~l~~~~~--~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~p~~ 154 (254)
T 3ds8_A 77 SKWLKIAMEDLKSRYG--FTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKKLPNS 154 (254)
T ss_dssp HHHHHHHHHHHHHHHC--CSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCSSCSSC
T ss_pred HHHHHHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccccCCcc
Confidence 4556666677776643 3689999999999999999999988 88999988876543211100000 00111211
Q ss_pred CccchhcC-ChhhhhccCCCcEEEEecC------CCCccChHHHHHHHHHHHHCCCCeEEEEecC--CCCCCCCCCcHHH
Q 004067 693 DPVGYEYS-SVMHHVHKMKGKLLLVHGM------IDENVHFRHTARLINALVAARKPYEILIFPD--ERHMPRRHRDRIY 763 (776)
Q Consensus 693 ~~~~~~~~-~~~~~~~~i~~P~lii~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~~~~~~~~~ 763 (776)
...+... .....+.+ +.|++.|+|. .|.+||+..+..+...+......++..++.+ ++|.... ++ .+
T Consensus 155 -~~~~~~~~~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~-~~-~~ 230 (254)
T 3ds8_A 155 -TPQMDYFIKNQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLH-ET-PK 230 (254)
T ss_dssp -CHHHHHHHHTGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGG-GS-HH
T ss_pred -hHHHHHHHHHHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhccc-CC-HH
Confidence 1111100 00111222 5799999999 9999999998888776654434456666666 6797633 33 35
Q ss_pred HHHHHHHHHHHh
Q 004067 764 MEERIWEFIERT 775 (776)
Q Consensus 764 ~~~~~~~fl~~~ 775 (776)
+.+.+..||+++
T Consensus 231 v~~~i~~fL~~~ 242 (254)
T 3ds8_A 231 SIEKTYWFLEKF 242 (254)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 889999999865
No 346
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.42 E-value=1.2e-13 Score=149.71 Aligned_cols=210 Identities=17% Similarity=0.160 Sum_probs=137.0
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCC-cEEEEECCC----CCCCCchhhhhhhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG-ILVWKLDNR----GTARRGLKFEASIK 611 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~d~r----g~g~~~~~~~~~~~ 611 (776)
+...+|.|.... +++|+||++|||+........+ ......|+++| ++|+.+||| |++.... +..
T Consensus 83 L~l~v~~P~~~~---~~~PviV~iHGGg~~~g~~~~~----~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~-~~~--- 151 (489)
T 1qe3_A 83 LYVNVFAPDTPS---QNLPVMVWIHGGAFYLGAGSEP----LYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSS-FDE--- 151 (489)
T ss_dssp CEEEEEEECSSC---CSEEEEEEECCSTTTSCCTTSG----GGCCHHHHHHHTCEEEEECCCCHHHHSCCCTT-TCT---
T ss_pred CEEEEEeCCCCC---CCCCEEEEECCCccccCCCCCc----ccCHHHHHhcCCEEEEecCccCcccccCcccc-ccc---
Confidence 667788886531 3589999999987432211111 11245566654 999999999 3322211 110
Q ss_pred hccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhC--CCceEEEEEcCCCCCccccccc--ccc
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTSWDGYDTF--YTE 684 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~--~~~~~~~v~~~~~~~~~~~~~~--~~~ 684 (776)
...+...+.|+..+++|+.++ ...|+++|+|+|+|+||++++.++... +.+|+++|+.+|..++...... +..
T Consensus 152 ~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~ 231 (489)
T 1qe3_A 152 AYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAA 231 (489)
T ss_dssp TSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHHHH
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 122334578999999999875 346899999999999999999888753 5789999999998754332110 001
Q ss_pred c---ccCCCCCCccchhcCChhhhh---------ccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCC
Q 004067 685 K---YMGLPSEDPVGYEYSSVMHHV---------HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDER 752 (776)
Q Consensus 685 ~---~~~~~~~~~~~~~~~~~~~~~---------~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 752 (776)
. .++.+.+..+-+...+....+ .....|.+++++..|..+.+.+..++++..+..++++.+-..++++
T Consensus 232 ~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~Eg 311 (489)
T 1qe3_A 232 AFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEG 311 (489)
T ss_dssp HHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETTGG
T ss_pred HHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecchh
Confidence 1 123332222222222221111 1223457888999999999998888888887788999999999999
Q ss_pred CCCCC
Q 004067 753 HMPRR 757 (776)
Q Consensus 753 H~~~~ 757 (776)
|.+..
T Consensus 312 ~~~~~ 316 (489)
T 1qe3_A 312 YLFFT 316 (489)
T ss_dssp GGTCC
T ss_pred Hhhcc
Confidence 98743
No 347
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.42 E-value=2.9e-10 Score=123.38 Aligned_cols=308 Identities=12% Similarity=0.024 Sum_probs=192.2
Q ss_pred eeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCc
Q 004067 60 IGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKK 139 (776)
Q Consensus 60 ~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg 139 (776)
..+++||++|+..+.+ ..|.+||+.+++....... +...+....|++
T Consensus 123 ~~~~~~g~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~-----------------------h~~~v~~~~~~~----- 169 (445)
T 2ovr_B 123 TCLQFCGNRIVSGSDD-----NTLKVWSAVTGKCLRTLVG-----------------------HTGGVWSSQMRD----- 169 (445)
T ss_dssp EEEEEETTEEEEEETT-----SCEEEEETTTCCEEEECCC-----------------------CSSCEEEEEEET-----
T ss_pred EEEEEcCCEEEEEECC-----CcEEEEECCCCcEEEEEcC-----------------------CCCCEEEEEecC-----
Confidence 3688999999865542 4699999998876443321 123677777764
Q ss_pred eEEEE-eCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCceecC
Q 004067 140 KIIMV-PLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTVTHG 217 (776)
Q Consensus 140 ~~l~~-~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~~~~ 217 (776)
+.|+. ..++.|.+||+.+++....+..... .+..+.| +++.++..+. +.|.+|++.+++..........
T Consensus 170 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~--~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~------ 240 (445)
T 2ovr_B 170 NIIISGSTDRTLKVWNAETGECIHTLYGHTS-TVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA------ 240 (445)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECCSS------
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEECCCCC-cEEEEEe--cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc------
Confidence 34554 4788999999999887644443332 3666666 4667777664 5799999998876544332211
Q ss_pred CcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCce
Q 004067 218 LAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV 297 (776)
Q Consensus 218 ~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 297 (776)
.+..+.| ||+.|+....+ ..|.+||+.+++.
T Consensus 241 -----------~v~~~~~--~~~~l~~~~~d------------------------------------g~i~iwd~~~~~~ 271 (445)
T 2ovr_B 241 -----------AVRCVQY--DGRRVVSGAYD------------------------------------FMVKVWDPETETC 271 (445)
T ss_dssp -----------CEEEEEE--CSSCEEEEETT------------------------------------SCEEEEEGGGTEE
T ss_pred -----------cEEEEEE--CCCEEEEEcCC------------------------------------CEEEEEECCCCcE
Confidence 1334556 78888776543 2478999988765
Q ss_pred EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCcc
Q 004067 298 SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVT 377 (776)
Q Consensus 298 ~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 377 (776)
...- ..+...+..+.| |++.++... .+..|.+||+.+++.......... ... .+ .
T Consensus 272 ~~~~--------~~~~~~v~~~~~--~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~~-~v~---~~-------~ 326 (445)
T 2ovr_B 272 LHTL--------QGHTNRVYSLQF--DGIHVVSGS----LDTSIRVWDVETGNCIHTLTGHQS-LTS---GM-------E 326 (445)
T ss_dssp EEEE--------CCCSSCEEEEEE--CSSEEEEEE----TTSCEEEEETTTCCEEEEECCCCS-CEE---EE-------E
T ss_pred eEEe--------cCCCCceEEEEE--CCCEEEEEe----CCCeEEEEECCCCCEEEEEcCCcc-cEE---EE-------E
Confidence 4331 345567788888 787777665 345699999998876443322211 100 01 2
Q ss_pred ccCCeEEEEeccCCceEEEEEeCCCce-eecccc---CCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCC
Q 004067 378 KYSGGFIWASEKTGFRHLYLHDINGTC-LGPITE---GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 453 (776)
Q Consensus 378 ~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~---~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~ 453 (776)
++ +.++++...+| .|.+||+..++ ...+.. +...+..+. | +++.+ +++..++ .+.+|.+. .|.
T Consensus 327 ~~-~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~-~--~~~~l-~s~~~dg--~v~iwd~~---~~~- 393 (445)
T 2ovr_B 327 LK-DNILVSGNADS--TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ-F--NKNFV-ITSSDDG--TVKLWDLK---TGE- 393 (445)
T ss_dssp EE-TTEEEEEETTS--CEEEEETTTCCEEEEECSTTSCSSCEEEEE-E--CSSEE-EEEETTS--EEEEEETT---TCC-
T ss_pred Ee-CCEEEEEeCCC--eEEEEECCCCcEEEEEccCCCCCCCEEEEE-E--CCCEE-EEEeCCC--eEEEEECC---CCc-
Confidence 22 33556666667 89999986654 344443 334455443 5 45654 4444443 36777654 343
Q ss_pred ccccceee------cCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCC
Q 004067 454 TLEAPVKL------TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 499 (776)
Q Consensus 454 ~~~~~~~l------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~ 499 (776)
.+..+ .....+..+.|+|+|..++...........++++|+..
T Consensus 394 ---~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 394 ---FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ---EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ---eeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 34444 11223678899999988888766655567899999854
No 348
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.41 E-value=4.1e-11 Score=126.13 Aligned_cols=271 Identities=10% Similarity=0.032 Sum_probs=163.5
Q ss_pred CCeeeEEEeecCCC---ceEEEEe-CCCcEEEEeCCC-Cccc-eecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEec
Q 004067 125 LGVTRYEWVKTSSK---KKIIMVP-LPDGIYFQDLSC-SKPE-LKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNL 197 (776)
Q Consensus 125 ~~~~~~~~sp~~~d---g~~l~~~-~~~~l~~~d~~~-~~~~-~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l 197 (776)
..+....|+| | |+.|+.. .++.|.+||+.+ +... ..+..... .+..+.|+|||+.|+..+. +.|.+|++
T Consensus 40 ~~v~~~~~~~---~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 40 DSIGCLSFSP---PTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG-PVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCEEEEEECC---TTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSS-CEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CceEEEEEcC---CCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccC-CEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 4788999999 8 6888876 678999999987 4332 23443333 4888999999999998875 57999999
Q ss_pred CCCceeEEeeCCCCCceecCCcccceecccCCcceEEE--CCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecC
Q 004067 198 LINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWW--SLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 275 (776)
Q Consensus 198 ~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~w--spDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (776)
.+++...+...... +..+.| +||++.|+....+
T Consensus 116 ~~~~~~~~~~~~~~------------------v~~~~~~~~~~~~~l~~~~~d--------------------------- 150 (368)
T 3mmy_A 116 SSNQAIQIAQHDAP------------------VKTIHWIKAPNYSCVMTGSWD--------------------------- 150 (368)
T ss_dssp TTTEEEEEEECSSC------------------EEEEEEEECSSCEEEEEEETT---------------------------
T ss_pred CCCCceeeccccCc------------------eEEEEEEeCCCCCEEEEccCC---------------------------
Confidence 99987765443221 457889 9999988876643
Q ss_pred CCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEE
Q 004067 276 PFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 355 (776)
Q Consensus 276 ~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~ 355 (776)
..|++||+.+++....- .....+..+.++++ .++... ....+.+|++..+......
T Consensus 151 ---------g~i~vwd~~~~~~~~~~---------~~~~~~~~~~~~~~--~~~~~~----~~~~i~~~~~~~~~~~~~~ 206 (368)
T 3mmy_A 151 ---------KTLKFWDTRSSNPMMVL---------QLPERCYCADVIYP--MAVVAT----AERGLIVYQLENQPSEFRR 206 (368)
T ss_dssp ---------SEEEEECSSCSSCSEEE---------ECSSCEEEEEEETT--EEEEEE----GGGCEEEEECSSSCEEEEE
T ss_pred ---------CcEEEEECCCCcEEEEE---------ecCCCceEEEecCC--eeEEEe----CCCcEEEEEeccccchhhh
Confidence 35899999877644321 11123444555544 344443 2335888888765433221
Q ss_pred EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce----eeccccCCe------------EEEEEE
Q 004067 356 VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC----LGPITEGDW------------MVEQIV 419 (776)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~----~~~lt~~~~------------~~~~~~ 419 (776)
...........-.+.+.. ...++ .+++...+| .|.+|+++... ...+..+.. .+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 279 (368)
T 3mmy_A 207 IESPLKHQHRCVAIFKDK---QNKPT-GFALGSIEG--RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGI- 279 (368)
T ss_dssp CCCSCSSCEEEEEEEECT---TSCEE-EEEEEETTS--EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEE-
T ss_pred ccccccCCCceEEEcccC---CCCCC-eEEEecCCC--cEEEEecCCCCccccceeeeeeecccccccccccccceEEE-
Confidence 111000000000000100 00111 245555666 78888877653 223333222 35555
Q ss_pred eecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeC
Q 004067 420 GVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDS 485 (776)
Q Consensus 420 ~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~ 485 (776)
.|+|+|+.|+..+ .++. +.+|.+. .+. .+..+..+. .+..+.|+|||+.|+.....
T Consensus 280 ~~sp~~~~l~s~~-~dg~--i~iwd~~---~~~----~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 280 AFHPVHGTLATVG-SDGR--FSFWDKD---ART----KLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp EECTTTCCEEEEE-TTSC--EEEEETT---TTE----EEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred EEecCCCEEEEEc-cCCe--EEEEECC---CCc----EEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 4999998765544 4432 6777654 232 445555543 46789999999999988653
No 349
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.41 E-value=9.7e-13 Score=135.39 Aligned_cols=199 Identities=12% Similarity=-0.049 Sum_probs=118.5
Q ss_pred CceEEEEEcCC--CCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHH
Q 004067 553 PYKTLISVYGG--PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 630 (776)
Q Consensus 553 ~~p~vl~~HG~--~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~ 630 (776)
..|.||++||. +++.. .|..++..| ..+|.|+++|+||+|.+...... . . ...+++.+.++.+.
T Consensus 80 ~~~~lv~lhG~~~~~~~~-------~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~~~-~-~----~~~~~~~~~l~~~~ 145 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQ-------VYSRLAEEL-DAGRRVSALVPPGFHGGQALPAT-L-T----VLVRSLADVVQAEV 145 (319)
T ss_dssp SSCEEEEECCSSTTCSGG-------GGHHHHHHH-CTTSEEEEEECTTSSTTCCEESS-H-H----HHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCcCCCHH-------HHHHHHHHh-CCCceEEEeeCCCCCCCCCCCCC-H-H----HHHHHHHHHHHHhc
Confidence 34789999994 33322 345556777 78999999999999965432110 0 0 01233333333322
Q ss_pred HcCCCCCCcEEEEeechHHHHHHHHHhhC---CCceEEEEEcCCCCCccc--cccccc--------cc---ccCCC--CC
Q 004067 631 KQGLAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWDG--YDTFYT--------EK---YMGLP--SE 692 (776)
Q Consensus 631 ~~~~id~~~i~l~G~S~GG~~a~~~a~~~---~~~~~~~v~~~~~~~~~~--~~~~~~--------~~---~~~~~--~~ 692 (776)
+..++.|+||||||.+++.+|.++ ++.++++|+.++...... ....+. .. +.... ..
T Consensus 146 -----~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (319)
T 3lcr_A 146 -----ADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQ 220 (319)
T ss_dssp -----TTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_pred -----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhH
Confidence 235899999999999999999877 788888888776543211 000000 00 00000 00
Q ss_pred Ccc---chhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCC-CCCCcHHHHHHHH
Q 004067 693 DPV---GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP-RRHRDRIYMEERI 768 (776)
Q Consensus 693 ~~~---~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~ 768 (776)
... .+...........+++|+|+++|.+ ..+++.....+.+.+. ...+++++++ +|.. ..++...++.+.+
T Consensus 221 ~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~---~~~~~~~~~g-~H~~~~~~~~~~~va~~i 295 (319)
T 3lcr_A 221 RITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLA---AMGQVVEAPG-DHFTIIEGEHVASTAHIV 295 (319)
T ss_dssp HHHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHH---TCSEEEEESS-CTTGGGSTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCC---CCceEEEeCC-CcHHhhCcccHHHHHHHH
Confidence 000 0000000011256789999999988 4556566666666553 4567888887 5654 3335889999999
Q ss_pred HHHHHHh
Q 004067 769 WEFIERT 775 (776)
Q Consensus 769 ~~fl~~~ 775 (776)
.+||.+.
T Consensus 296 ~~fL~~~ 302 (319)
T 3lcr_A 296 GDWLREA 302 (319)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999763
No 350
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=3.7e-11 Score=127.08 Aligned_cols=243 Identities=9% Similarity=0.012 Sum_probs=156.5
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccc--eecCCCCCCCccCceeCCC--CCEEEEEEC-CcEEEEecC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPE--LKLSSSSCSPVIDPHLSSD--GTMIAFVRD-CELHVLNLL 198 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~SpD--g~~la~~~~-~~l~~~~l~ 198 (776)
..+....|+| ||++|+.. .++.|.+||+.++... ..+..+. ..+..+.|+|+ ++.|+.... +.|.+|++.
T Consensus 12 ~~v~~~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 12 ELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE-GPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp CCEEEEEECS---SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred ccEEEEEEcC---CCCEEEEEECCCcEEEEecCCCcceeeeEecCCC-CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 4788999999 99999987 6889999999854332 2344333 34788999988 898888775 579999999
Q ss_pred CCceeEEeeCCCCCceecCCcccceecccCCcceEEECCC--CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCC
Q 004067 199 INEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD--SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYP 276 (776)
Q Consensus 199 ~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (776)
+++...+...... ...+..+.|+|+ ++.|+....+
T Consensus 88 ~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~~l~~~~~d---------------------------- 124 (379)
T 3jrp_A 88 NGRWSQIAVHAVH---------------SASVNSVQWAPHEYGPLLLVASSD---------------------------- 124 (379)
T ss_dssp TTEEEEEEEECCC---------------SSCEEEEEECCGGGCSEEEEEETT----------------------------
T ss_pred CCceeEeeeecCC---------------CcceEEEEeCCCCCCCEEEEecCC----------------------------
Confidence 9864333221110 011457889999 8888876643
Q ss_pred CCCCCCCeEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEEEEEecc-------------CCeEEEEEEeecCceEEEE
Q 004067 277 FAGASNVKVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMH-------------GNILTAQVLNRSQTKLKVL 342 (776)
Q Consensus 277 ~~g~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~Sp-------------Dg~~l~~~~~~~~~~~~l~ 342 (776)
..|.+||+.++... .+.. ..+...+..+.|+| |++.++... .+..|+
T Consensus 125 --------~~i~v~d~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~dg~i~ 185 (379)
T 3jrp_A 125 --------GKVSVVEFKENGTTSPIII-------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG----ADNLVK 185 (379)
T ss_dssp --------SEEEEEECCTTSCCCEEEE-------ECCTTCEEEEEECCCC----------CTTCEEEEEE----TTSCEE
T ss_pred --------CcEEEEecCCCCceeeEEe-------cCCCCceEEEEEcCccccccccccCCCCCCEEEEEe----CCCeEE
Confidence 35889999877422 2211 34566789999999 688777665 344689
Q ss_pred EEECCCCceE--EEEE---eccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce----eecccc--C
Q 004067 343 KFDIKTGQRK--VILV---EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC----LGPITE--G 411 (776)
Q Consensus 343 ~~d~~~g~~~--~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~----~~~lt~--~ 411 (776)
+||+.++... .+.. +...... -.|+|.. ..+.++++...+| .|.+|++..+. ...+.. .
T Consensus 186 i~d~~~~~~~~~~~~~~~~h~~~v~~---~~~sp~~-----~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~ 255 (379)
T 3jrp_A 186 IWKYNSDAQTYVLESTLEGHSDWVRD---VAWSPTV-----LLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKF 255 (379)
T ss_dssp EEEEETTTTEEEEEEEECCCSSCEEE---EEECCCC-----SSSEEEEEEETTS--CEEEEEESSTTSCCEEEESSSSCC
T ss_pred EEEecCCCcceeeEEEEecccCcEeE---EEECCCC-----CCCCeEEEEeCCC--EEEEEeCCCCCccceeeeeccccC
Confidence 9998776532 2211 1211111 1233310 0045677777777 78888877652 222222 3
Q ss_pred CeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 412 DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 412 ~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
...+..+. |+++|+.|+..+. ++ .+.+|.++.
T Consensus 256 ~~~v~~~~-~s~~g~~l~~~~~-dg--~i~iw~~~~ 287 (379)
T 3jrp_A 256 PDVLWRAS-WSLSGNVLALSGG-DN--KVTLWKENL 287 (379)
T ss_dssp SSCEEEEE-ECSSSCCEEEEES-SS--SEEEEEEEE
T ss_pred CCcEEEEE-EcCCCCEEEEecC-CC--cEEEEeCCC
Confidence 44455554 9999997766655 33 389999986
No 351
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.40 E-value=7e-12 Score=135.75 Aligned_cols=256 Identities=11% Similarity=0.040 Sum_probs=154.1
Q ss_pred CCCceeEcC-CCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 56 APTSIGFSP-DDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 56 ~~~~~~~Sp-DG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
.++.++||| ||++|+-.+. + ..|.+||+.++..+.+..... ....+..+.|+|
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~-D----~~v~iwd~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~ 219 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSM-E----GTTRLQDFKGNILRVFASSDT---------------------INIWFCSLDVSA 219 (435)
T ss_dssp CCCEEEECSSCTTEEEEECS-S----SCEEEEETTSCEEEEEECCSS---------------------CSCCCCCEEEET
T ss_pred CEEEEEEeCCCCCEEEEEeC-C----CEEEEeeccCCceeEEeccCC---------------------CCccEEEEEECC
Confidence 368999999 7888875443 2 469999999887766654322 012356789999
Q ss_pred cCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE--CCcEEEEecCCCceeE-EeeCCC
Q 004067 135 TSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR--DCELHVLNLLINEQRQ-LTHGAN 210 (776)
Q Consensus 135 ~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~~g~~~~-lt~~~~ 210 (776)
||+.|+.. .++.|++||+.+.... .+..+.. .+..+.|+|+++.++.+. ++.|.+||+.+++... +....
T Consensus 220 ---~~~~l~~g~~dg~i~~wd~~~~~~~-~~~~h~~-~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~- 293 (435)
T 4e54_B 220 ---SSRMVVTGDNVGNVILLNMDGKELW-NLRMHKK-KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSL- 293 (435)
T ss_dssp ---TTTEEEEECSSSBEEEEESSSCBCC-CSBCCSS-CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCC-
T ss_pred ---CCCEEEEEeCCCcEeeeccCcceeE-EEecccc-eEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEee-
Confidence 99999876 6789999999887766 6655443 488899999998665554 3568999988764321 11110
Q ss_pred CCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEE
Q 004067 211 GNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVV 290 (776)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~ 290 (776)
+.. ..+..++|||||+.|+..+.+ ..|.+|
T Consensus 294 ------~h~--------~~v~~~~~spdg~~l~s~~~D------------------------------------~~i~iw 323 (435)
T 4e54_B 294 ------PHR--------HPVNAACFSPDGARLLTTDQK------------------------------------SEIRVY 323 (435)
T ss_dssp ------BCS--------SCEEECCBCTTSSEEEEEESS------------------------------------SCEEEE
T ss_pred ------ecc--------ccccceeECCCCCeeEEEcCC------------------------------------CEEEEE
Confidence 001 114567899999999877643 247899
Q ss_pred EcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeec--------CceEEEEEEECCCCceEEEEEeccCce
Q 004067 291 SAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS--------QTKLKVLKFDIKTGQRKVILVEELDSW 362 (776)
Q Consensus 291 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--------~~~~~l~~~d~~~g~~~~l~~~~~~~~ 362 (776)
|+.+++........... ...........|+|++..++...... .....|.+||..+|+............
T Consensus 324 d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~ 401 (435)
T 4e54_B 324 SASQWDCPLGLIPHPHR--HFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG 401 (435)
T ss_dssp ESSSSSSEEEECCCCCC--CCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC
T ss_pred ECCCCccceEEeccccc--ccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc
Confidence 99887654332211000 01111233467888887655543221 123468999999988654432221111
Q ss_pred eecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee
Q 004067 363 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG 406 (776)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~ 406 (776)
+..-..|+| ++.++..+ .++ +|++|+++.++.+
T Consensus 402 v~s~~~fsp--------dg~~lasg-~d~--~i~iW~~~~gk~r 434 (435)
T 4e54_B 402 ISSLNEFNP--------MGDTLASA-MGY--HILIWSQQEARTR 434 (435)
T ss_dssp CCCEEEECT--------TSSCEEEE-CSS--EEEECCCC-----
T ss_pred EEEEEEECC--------CCCEEEEE-cCC--cEEEEECCcCeee
Confidence 111012333 23344443 344 7999999877654
No 352
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.39 E-value=9.9e-12 Score=124.69 Aligned_cols=214 Identities=15% Similarity=0.133 Sum_probs=128.5
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECC--------CCCCCCchhh
Q 004067 535 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--------RGTARRGLKF 606 (776)
Q Consensus 535 ~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--------rg~g~~~~~~ 606 (776)
..+.+.+|.|.... ++.|+||.+||+. | ....||+++.+++ +|..+.+. |
T Consensus 90 ~~~~~~i~lP~~~~---~p~Pvii~i~~~~--------~----------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f 147 (375)
T 3pic_A 90 ISFTVTITYPSSGT---APYPAIIGYGGGS--------L----------PAPAGVAMINFNNDNIAAQVNTGSRGQGK-F 147 (375)
T ss_dssp EEEEEEEECCSSSC---SSEEEEEEETTCS--------S----------CCCTTCEEEEECHHHHSCCSSGGGTTCSH-H
T ss_pred eEEEEEEECCCCCC---CCccEEEEECCCc--------c----------ccCCCeEEEEecccccccccCCCCcccee-c
Confidence 45889999997642 6899999999841 1 1357999999986 33333333 3
Q ss_pred hhhh--hhccCCcc--HHHHHHHHHHHHHcC--CCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCC----cc
Q 004067 607 EASI--KHNCGRID--AEDQLTGAEWLIKQG--LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS----WD 676 (776)
Q Consensus 607 ~~~~--~~~~~~~~--~~D~~~~i~~l~~~~--~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~----~~ 676 (776)
.... ...++... ..++.+++++|.+++ .||++||+++|||+||..|+++++..+ +|+++|...+..+ ++
T Consensus 148 ~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G~~~~R 226 (375)
T 3pic_A 148 YDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGGSACWR 226 (375)
T ss_dssp HHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTTSCHH
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCchhhhh
Confidence 2111 12233322 358999999999998 899999999999999999999999865 6899998765432 22
Q ss_pred ccc--ccccccc------cC-CCCCCcc--chh------cCChhhhhccCC-CcEEEEecCCCCccChHHHHHHHHHH--
Q 004067 677 GYD--TFYTEKY------MG-LPSEDPV--GYE------YSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINAL-- 736 (776)
Q Consensus 677 ~~~--~~~~~~~------~~-~~~~~~~--~~~------~~~~~~~~~~i~-~P~lii~G~~D~~v~~~~~~~~~~~l-- 736 (776)
... ..+.+.. .+ ..|.... .|. ..+....++-+. .|+|++.| .|..+++......+..+
T Consensus 227 ~~~~~~~~Ge~v~~~~~~~~e~~Wf~~~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g~~~~~~~a~~ 305 (375)
T 3pic_A 227 ISDYLKSQGANIQTASEIIGEDPWFSTTFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQSCFGCMTAAHM 305 (375)
T ss_dssp HHHHHHHTTCCCCCHHHHTTTCSCSCGGGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHHHHHHHHHHHH
T ss_pred hhhhhcccCccccccccccCcccccccchhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccCcHHHHHHHHHHHH
Confidence 100 0000000 00 1121111 111 012222333343 69999999 99888876554333333
Q ss_pred --HHCCC--CeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 737 --VAARK--PYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 737 --~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+..|. ++.+.+..+.+|+....+. .+.+.+||+++|
T Consensus 306 VY~~lG~~d~~~~~~~ggH~Hc~fp~~~----~~~~~~F~~k~L 345 (375)
T 3pic_A 306 AWQALGVSDHMGYSQIGAHAHCAFPSNQ----QSQLTAFVQKFL 345 (375)
T ss_dssp HHHHTTCGGGEEEECCSCCSTTCCCGGG----HHHHHHHHHHHT
T ss_pred HHHHcCCccceEEEeeCCCccccCCHHH----HHHHHHHHHHHh
Confidence 34454 5666543334554323233 367778888776
No 353
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.39 E-value=8.5e-11 Score=123.67 Aligned_cols=267 Identities=12% Similarity=0.058 Sum_probs=164.5
Q ss_pred CCCceeEcCC---CCEEEEEeCCCCcCcceEEEEecCC-Cce--EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeee
Q 004067 56 APTSIGFSPD---DNLITYLLSPDHSLSRKVFSFDPKT-CKQ--ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTR 129 (776)
Q Consensus 56 ~~~~~~~SpD---G~~ia~~~~~~~~~~~~l~~~~~~~-~~~--~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 129 (776)
.+..++|||| |++|+..+.+ ..|.+|++.+ +.. ..+..+ ...+..
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h------------------------~~~v~~ 91 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMH------------------------TGPVLD 91 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETT-----SEEEEEEECTTSCEEEEEEEEC------------------------SSCEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCC-----CcEEEEEcCCCCceeEEEeccc------------------------cCCEEE
Confidence 3589999999 6888865542 4699999987 443 233332 246889
Q ss_pred EEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCcee--CCCCCEEEEEEC-CcEEEEecCCCceeEE
Q 004067 130 YEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHL--SSDGTMIAFVRD-CELHVLNLLINEQRQL 205 (776)
Q Consensus 130 ~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~--SpDg~~la~~~~-~~l~~~~l~~g~~~~l 205 (776)
..|+| ||+.|+.. .++.|.+||+.+++.. .+..... .+..+.| +||++.|+.... +.|.+|++.+++....
T Consensus 92 ~~~~~---~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~-~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 92 VCWSD---DGSKVFTASCDKTAKMWDLSSNQAI-QIAQHDA-PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp EEECT---TSSEEEEEETTSEEEEEETTTTEEE-EEEECSS-CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred EEECc---CCCEEEEEcCCCcEEEEEcCCCCce-eeccccC-ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 99999 99999876 6788999999999877 5544433 4788999 999998888774 5799999998876544
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
...... ...+.+.+..++....+ .
T Consensus 167 ~~~~~~--------------------~~~~~~~~~~~~~~~~~------------------------------------~ 190 (368)
T 3mmy_A 167 LQLPER--------------------CYCADVIYPMAVVATAE------------------------------------R 190 (368)
T ss_dssp EECSSC--------------------EEEEEEETTEEEEEEGG------------------------------------G
T ss_pred EecCCC--------------------ceEEEecCCeeEEEeCC------------------------------------C
Confidence 333221 12233334445444422 2
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCe----EEEEEEeecCceEEEEEEECCCCce----EEEEEe
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI----LTAQVLNRSQTKLKVLKFDIKTGQR----KVILVE 357 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~----~l~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~ 357 (776)
.+.+|++........... .........+.+.+++. .++... .+..|.+||+..+.. ..+..+
T Consensus 191 ~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~dg~i~i~~~~~~~~~~~~~~~~~~ 260 (368)
T 3mmy_A 191 GLIVYQLENQPSEFRRIE------SPLKHQHRCVAIFKDKQNKPTGFALGS----IEGRVAIHYINPPNPAKDNFTFKCH 260 (368)
T ss_dssp CEEEEECSSSCEEEEECC------CSCSSCEEEEEEEECTTSCEEEEEEEE----TTSEEEEEESSCSCHHHHSEEEECS
T ss_pred cEEEEEeccccchhhhcc------ccccCCCceEEEcccCCCCCCeEEEec----CCCcEEEEecCCCCccccceeeeee
Confidence 367888876654433222 11222233344444332 244443 345688999987632 222222
Q ss_pred ccCc----------eeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCc
Q 004067 358 ELDS----------WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASG 426 (776)
Q Consensus 358 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~ 426 (776)
.... .+ ..-.|+| ++.++++...+| .|++|++.+++ ...+..+...+..+. |+|||+
T Consensus 261 ~~~~~~~~~~~~~~~v-~~~~~sp--------~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~-~s~~g~ 328 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAV-NGIAFHP--------VHGTLATVGSDG--RFSFWDKDARTKLKTSEQLDQPISACC-FNHNGN 328 (368)
T ss_dssp EEC----CCCEEECCE-EEEEECT--------TTCCEEEEETTS--CEEEEETTTTEEEEECCCCSSCEEEEE-ECTTSS
T ss_pred ecccccccccccccce-EEEEEec--------CCCEEEEEccCC--eEEEEECCCCcEEEEecCCCCCceEEE-ECCCCC
Confidence 1100 00 0011222 233566666677 79999988765 455555556666665 999999
Q ss_pred EEEEEEcc
Q 004067 427 QVYFTGTL 434 (776)
Q Consensus 427 ~i~~~~~~ 434 (776)
.|+..+..
T Consensus 329 ~l~~~s~d 336 (368)
T 3mmy_A 329 IFAYASSY 336 (368)
T ss_dssp CEEEEECC
T ss_pred eEEEEecc
Confidence 87777664
No 354
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.38 E-value=1e-10 Score=121.76 Aligned_cols=213 Identities=9% Similarity=0.091 Sum_probs=137.0
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCce-----EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEE
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQ-----ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYE 131 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~-----~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 131 (776)
+..++|||||++|+..+.+ ..|.+|++.++.. ..+..+ ...+....
T Consensus 14 v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~------------------------~~~v~~~~ 64 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAH------------------------DSSIVAID 64 (351)
T ss_dssp EEEEEECSSSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECC------------------------SSCEEEEE
T ss_pred eeEEEEcCCCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccC------------------------CCcEEEEE
Confidence 5889999999999866542 4699999987532 222222 24688999
Q ss_pred EeecCCC--ceEEEEe-CCCcEEEEeCCCCcc---------ceecCCCCCCCccCceeCCC--CCEEEEEEC-CcEEEEe
Q 004067 132 WVKTSSK--KKIIMVP-LPDGIYFQDLSCSKP---------ELKLSSSSCSPVIDPHLSSD--GTMIAFVRD-CELHVLN 196 (776)
Q Consensus 132 ~sp~~~d--g~~l~~~-~~~~l~~~d~~~~~~---------~~~l~~~~~~~~~~~~~SpD--g~~la~~~~-~~l~~~~ 196 (776)
|+| . ++.|+.. .++.|.+||+.+++. ...+.... ..+..+.|+|+ ++.|+.... +.|.+|+
T Consensus 65 ~~~---~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd 140 (351)
T 3f3f_A 65 WAS---PEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSK-GSLYSVKFAPAHLGLKLACLGNDGILRLYD 140 (351)
T ss_dssp ECC---GGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEETTCEEEEEE
T ss_pred EcC---CCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccC-CceeEEEEcCCCCCcEEEEecCCCcEEEec
Confidence 998 5 7888765 678999999988742 21333333 34788999999 999888775 5799999
Q ss_pred cCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCC---CCeEEEEEecCCCCCeEEEeecCCCCCCCCCccee
Q 004067 197 LLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD---SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 273 (776)
Q Consensus 197 l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (776)
+.+++..+....... . ....+........+..+.|+|+ ++.|+....+
T Consensus 141 ~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~------------------------- 191 (351)
T 3f3f_A 141 ALEPSDLRSWTLTSE---M-KVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE------------------------- 191 (351)
T ss_dssp CSSTTCTTCCEEEEE---E-ESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT-------------------------
T ss_pred CCChHHhcccccccc---c-cccccccCCcccceeEEEeccCCCCCcEEEEecCC-------------------------
Confidence 988754211110000 0 0000011111223567899998 7777766532
Q ss_pred cCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCC----eEEEEEEeecCceEEEEEEECCCC
Q 004067 274 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGN----ILTAQVLNRSQTKLKVLKFDIKTG 349 (776)
Q Consensus 274 ~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg----~~l~~~~~~~~~~~~l~~~d~~~g 349 (776)
..+.+++..+++...+..- ..+...+..++|+|+| +.++... .+..|.+||+.++
T Consensus 192 -----------~~~~~~~~~~~~~~~~~~~------~~h~~~i~~~~~~p~~~~~~~~l~s~~----~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 192 -----------QAIIYQRGKDGKLHVAAKL------PGHKSLIRSISWAPSIGRWYQLIATGC----KDGRIRIFKITEK 250 (351)
T ss_dssp -----------EEEEEEECTTSCEEEEEEC------CCCCSCEEEEEECCCSSCSSEEEEEEE----TTSCEEEEEEEEC
T ss_pred -----------CcEEEEccCCCceeeeeec------CCCCcceeEEEECCCCCCcceEEEEEc----CCCeEEEEeCCCC
Confidence 3345666666665443321 4566789999999998 6666655 3455889998776
Q ss_pred ceE
Q 004067 350 QRK 352 (776)
Q Consensus 350 ~~~ 352 (776)
...
T Consensus 251 ~~~ 253 (351)
T 3f3f_A 251 LSP 253 (351)
T ss_dssp C--
T ss_pred cCc
Confidence 543
No 355
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.3e-10 Score=119.33 Aligned_cols=274 Identities=8% Similarity=-0.021 Sum_probs=166.9
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCce
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~ 202 (776)
..+....| | |++.|+.. .++.|.+||+.+++....+.... ..+..+.|+||++.|+.... +.+.+|++.....
T Consensus 19 ~~v~~~~~-~---~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 19 QDVRDVVA-V---DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ-GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp SCEEEEEE-E---ETTEEEEEETTSEEEEEEESSSEEEEEEEECS-SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred CCcEEEEe-c---CCCEEEEEEcCCcEEEEECCCCEEEEEeecCC-ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 46888899 8 89888876 67889999998887663343333 35888999999999998875 4688898876532
Q ss_pred eE-E-eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 203 RQ-L-THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 203 ~~-l-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
.+ + ...... ..+..+.| +++.|+....+
T Consensus 94 ~~~~~~~~~~~----------------~~i~~~~~--~~~~l~~~~~d-------------------------------- 123 (313)
T 3odt_A 94 EDPLYTLIGHQ----------------GNVCSLSF--QDGVVISGSWD-------------------------------- 123 (313)
T ss_dssp SCC-CEECCCS----------------SCEEEEEE--ETTEEEEEETT--------------------------------
T ss_pred CCcccchhhcc----------------cCEEEEEe--cCCEEEEEeCC--------------------------------
Confidence 11 1 111110 11345666 67777765532
Q ss_pred CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc-CCeEEEEEEeecCceEEEEEEECCCCceEEEEEecc
Q 004067 281 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL 359 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 359 (776)
..|.+|| .......+ ..+...+..+.|+| +++.++... .+..|.+||. +..........
T Consensus 124 ----~~i~~~d-~~~~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~~----~d~~i~i~d~--~~~~~~~~~~~ 183 (313)
T 3odt_A 124 ----KTAKVWK-EGSLVYNL---------QAHNASVWDAKVVSFSENKFLTAS----ADKTIKLWQN--DKVIKTFSGIH 183 (313)
T ss_dssp ----SEEEEEE-TTEEEEEE---------ECCSSCEEEEEEEETTTTEEEEEE----TTSCEEEEET--TEEEEEECSSC
T ss_pred ----CCEEEEc-CCcEEEec---------ccCCCceeEEEEccCCCCEEEEEE----CCCCEEEEec--CceEEEEeccC
Confidence 3478888 22223333 34566788899998 888777665 3445888983 33322222111
Q ss_pred CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCc
Q 004067 360 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL 438 (776)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~ 438 (776)
..... .+.+.+++.+++...+| .|++|++..++ ...+..+...+..+. |+++|+ ++ .+..++
T Consensus 184 ~~~i~----------~~~~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~-~~~~~~-l~-~~~~dg-- 246 (313)
T 3odt_A 184 NDVVR----------HLAVVDDGHFISCSNDG--LIKLVDMHTGDVLRTYEGHESFVYCIK-LLPNGD-IV-SCGEDR-- 246 (313)
T ss_dssp SSCEE----------EEEEEETTEEEEEETTS--EEEEEETTTCCEEEEEECCSSCEEEEE-ECTTSC-EE-EEETTS--
T ss_pred cccEE----------EEEEcCCCeEEEccCCC--eEEEEECCchhhhhhhhcCCceEEEEE-EecCCC-EE-EEecCC--
Confidence 11100 01222233355566667 89999987655 445555555566654 999995 33 444443
Q ss_pred eeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCce
Q 004067 439 ESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 502 (776)
Q Consensus 439 ~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~ 502 (776)
.+.+|.+. .+. ....+..+. .+..+.|+|||+ ++. .+.. ..|.+|+..+++.
T Consensus 247 ~v~iwd~~---~~~----~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~d---g~i~iw~~~~~~~ 299 (313)
T 3odt_A 247 TVRIWSKE---NGS----LKQVITLPAISIWSVDCMSNGD-IIV-GSSD---NLVRIFSQEKSRW 299 (313)
T ss_dssp EEEEECTT---TCC----EEEEEECSSSCEEEEEECTTSC-EEE-EETT---SCEEEEESCGGGC
T ss_pred EEEEEECC---CCc----eeEEEeccCceEEEEEEccCCC-EEE-EeCC---CcEEEEeCCCCce
Confidence 35666554 232 445555444 467889999998 333 3332 3699999877653
No 356
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.38 E-value=2.4e-10 Score=118.17 Aligned_cols=283 Identities=13% Similarity=0.117 Sum_probs=166.1
Q ss_pred CceEEEEeC------CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE-----------CCcEEEEecCCC
Q 004067 138 KKKIIMVPL------PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR-----------DCELHVLNLLIN 200 (776)
Q Consensus 138 dg~~l~~~~------~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~-----------~~~l~~~~l~~g 200 (776)
||+++++.. .+.|+++|..+++....+..+.. .. +.+||||++++... .+.|.++|.+++
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~--P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--PN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--CE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC--Cc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 999999873 45799999999887745544433 34 99999999876654 235999999998
Q ss_pred ceeE-EeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCC
Q 004067 201 EQRQ-LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAG 279 (776)
Q Consensus 201 ~~~~-lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (776)
+... +...... +...+.. ...+.+||||++|+.......
T Consensus 120 ~v~~~I~v~~g~-r~~~g~~----------P~~~a~spDGk~lyVan~~~~----------------------------- 159 (386)
T 3sjl_D 120 LPTADIELPDAP-RFLVGTY----------PWMTSLTPDGKTLLFYQFSPA----------------------------- 159 (386)
T ss_dssp CEEEEEEETTCC-CCCBSCC----------GGGEEECTTSSEEEEEECSSS-----------------------------
T ss_pred eEEEEEECCCcc-ccccCCC----------CceEEEcCCCCEEEEEEcCCC-----------------------------
Confidence 7643 3322200 0000101 336889999998876542111
Q ss_pred CCCCeEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEE------EEEeccCCeEEEEEEeecCceEEEEEEECCC-Cce
Q 004067 280 ASNVKVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLA------RVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-GQR 351 (776)
Q Consensus 280 ~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~------~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~-g~~ 351 (776)
..|.++|+++++.. ++..+ ....+. -++.++||++++ +++++ +..
T Consensus 160 -----~~VsVID~~t~~vv~tI~v~--------g~~~~~P~g~~~~~~~~~DG~~~~--------------v~~~~~g~v 212 (386)
T 3sjl_D 160 -----PAVGVVDLEGKAFKRMLDVP--------DCYHIFPTAPDTFFMHCRDGSLAK--------------VAFGTEGTP 212 (386)
T ss_dssp -----CEEEEEETTTTEEEEEEECC--------SEEEEEEEETTEEEEEETTSCEEE--------------EECCSSSCC
T ss_pred -----CeEEEEECCCCcEEEEEECC--------CcceeecCCCceeEEECCCCCEEE--------------EECCCCCeE
Confidence 35789999998854 44332 111111 124455555433 33332 332
Q ss_pred EEEEEeccCcee-ecccccccCCCCccc--cCCeEEEEeccCCceEEEEEeCCCceeecccc----------CCeEEE--
Q 004067 352 KVILVEELDSWV-NLHDCFTPLDKGVTK--YSGGFIWASEKTGFRHLYLHDINGTCLGPITE----------GDWMVE-- 416 (776)
Q Consensus 352 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~----------~~~~~~-- 416 (776)
.. +. . .... ...+.|.. ..+ .+++++|.+. +| ++|.+|..++..+.+.. ..+...
T Consensus 213 ~~-~~-~-~~~~~~~~~~~~~----~~~~~~dG~~~~vs~-~g--~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~ 282 (386)
T 3sjl_D 213 EI-TH-T-EVFHPEDEFLINH----PAYSQKAGRLVWPTY-TG--KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 282 (386)
T ss_dssp EE-EE-C-CCCSCTTSCBCSC----CEEETTTTEEEEEBT-TS--EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS
T ss_pred EE-ee-c-ceecccccccccc----ceeEcCCCcEEEEeC-CC--EEEEEECCCCcceeecceeccccccccccccCCCc
Confidence 11 11 0 0000 00111110 011 2456778776 45 89999998765322211 122221
Q ss_pred EEEeecCCCcEEEEEEccCC-----CceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCE
Q 004067 417 QIVGVNEASGQVYFTGTLDG-----PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPR 491 (776)
Q Consensus 417 ~~~~~s~dg~~i~~~~~~~~-----~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 491 (776)
....++++++++|+....++ ..-.++|.+|+.+ ++ .+.++.-+...+++.+|+|++.++|+.+... ..
T Consensus 283 q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~k----v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~--~~ 355 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GE----RLAKFEMGHEIDSINVSQDEKPLLYALSTGD--KT 355 (386)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CC----EEEEEEEEEEECEEEECSSSSCEEEEEETTT--TE
T ss_pred ceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC-Ce----EEEEEECCCCcceEEECCCCCeEEEEEcCCC--Ce
Confidence 23457899999999864211 1125899999853 32 4566665555678999999986666655422 47
Q ss_pred EEEEEcCCCceeEeec
Q 004067 492 ILLCSLQDGSLVLPLY 507 (776)
Q Consensus 492 i~~~~~~~~~~~~~l~ 507 (776)
|.++|..+++.++.+-
T Consensus 356 VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 356 LYIHDAESGEELRSVN 371 (386)
T ss_dssp EEEEETTTCCEEEEEC
T ss_pred EEEEECCCCcEEEEec
Confidence 9999999998777664
No 357
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.38 E-value=7.5e-10 Score=120.84 Aligned_cols=275 Identities=12% Similarity=0.060 Sum_probs=173.7
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|+||+ .|+..+. + ..|.+||+.+++....... +...+....|++ +
T Consensus 165 V~~l~~~~~~-~l~s~s~-d----g~i~vwd~~~~~~~~~~~~-----------------------h~~~v~~l~~~~-~ 214 (464)
T 3v7d_B 165 VWALKYAHGG-ILVSGST-D----RTVRVWDIKKGCCTHVFEG-----------------------HNSTVRCLDIVE-Y 214 (464)
T ss_dssp EEEEEECSTT-EEEEEET-T----SCEEEEETTTTEEEEEECC-----------------------CSSCEEEEEEEE-S
T ss_pred EEEEEEcCCC-EEEEEeC-C----CCEEEEECCCCcEEEEECC-----------------------CCCccEEEEEec-C
Confidence 5788999999 5554433 2 4699999999876554431 123677777873 1
Q ss_pred CCceEEEEe-CCCcEEEEeCCCCccceecC--------------------CCCCCCccCceeCCCCCEEEEEEC-CcEEE
Q 004067 137 SKKKIIMVP-LPDGIYFQDLSCSKPELKLS--------------------SSSCSPVIDPHLSSDGTMIAFVRD-CELHV 194 (776)
Q Consensus 137 ~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~--------------------~~~~~~~~~~~~SpDg~~la~~~~-~~l~~ 194 (776)
++++.|+.. .++.|.+||+.++....... ...........++|+++.++.... +.|.+
T Consensus 215 ~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~v 294 (464)
T 3v7d_B 215 KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIV 294 (464)
T ss_dssp SSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEE
T ss_pred CCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEE
Confidence 277877765 78899999998876431100 000111223466899999988874 57999
Q ss_pred EecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 195 LNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 195 ~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
||+.+++.......... .+..+.|+|||+.|+..+.+
T Consensus 295 wd~~~~~~~~~~~~~~~-----------------~v~~~~~~~~~~~l~sg~~d-------------------------- 331 (464)
T 3v7d_B 295 WDVAQMKCLYILSGHTD-----------------RIYSTIYDHERKRCISASMD-------------------------- 331 (464)
T ss_dssp EETTTTEEEEEECCCSS-----------------CEEEEEEETTTTEEEEEETT--------------------------
T ss_pred EECCCCcEEEEecCCCC-----------------CEEEEEEcCCCCEEEEEeCC--------------------------
Confidence 99998876544322211 14578899999998876643
Q ss_pred CCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEE
Q 004067 275 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 354 (776)
Q Consensus 275 ~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l 354 (776)
..|++||+.+++....- ..+...+..+.|+ ++.++..+ .+..|.+||+.++.....
T Consensus 332 ----------g~i~vwd~~~~~~~~~~--------~~h~~~v~~~~~~--~~~l~s~s----~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 332 ----------TTIRIWDLENGELMYTL--------QGHTALVGLLRLS--DKFLVSAA----ADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp ----------SCEEEEETTTTEEEEEE--------CCCSSCEEEEEEC--SSEEEEEE----TTSEEEEEETTTCCEEEE
T ss_pred ----------CcEEEEECCCCcEEEEE--------eCCCCcEEEEEEc--CCEEEEEe----CCCcEEEEECCCCceeee
Confidence 24799999988754431 4566678888887 45666655 455699999998775544
Q ss_pred EEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeec--cccCCeEEEEEEeecCCCcEEEEEE
Q 004067 355 LVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGP--ITEGDWMVEQIVGVNEASGQVYFTG 432 (776)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~--lt~~~~~~~~~~~~s~dg~~i~~~~ 432 (776)
..+...... ..|.+ ++.++++.. +| .|++|++.+++... +..+...+..+. |+ ++.+++..
T Consensus 388 ~~~~~~~~~---~~~~~--------~~~~l~~~~-dg--~i~iwd~~~g~~~~~~~~~~~~~v~~v~-~~--~~~l~~~~ 450 (464)
T 3v7d_B 388 YHHTNLSAI---TTFYV--------SDNILVSGS-EN--QFNIYNLRSGKLVHANILKDADQIWSVN-FK--GKTLVAAV 450 (464)
T ss_dssp EECTTCCCE---EEEEE--------CSSEEEEEE-TT--EEEEEETTTCCEEESCTTTTCSEEEEEE-EE--TTEEEEEE
T ss_pred ecCCCCccE---EEEEe--------CCCEEEEec-CC--eEEEEECCCCcEEehhhccCCCcEEEEE-ec--CCEEEEEE
Confidence 443322111 01222 233555444 55 89999988776543 444455555554 54 67777776
Q ss_pred ccCCCceeeEEEEEe
Q 004067 433 TLDGPLESHLYCAKL 447 (776)
Q Consensus 433 ~~~~~~~~~l~~~~~ 447 (776)
..++. ..++.++.
T Consensus 451 ~~~g~--~~i~~ldf 463 (464)
T 3v7d_B 451 EKDGQ--SFLEILDF 463 (464)
T ss_dssp EETTE--EEEEEEEC
T ss_pred EeCCe--EEEEEeec
Confidence 66553 55666554
No 358
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.37 E-value=1.9e-10 Score=117.30 Aligned_cols=242 Identities=9% Similarity=0.018 Sum_probs=149.1
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCc--cceecCCCCCCCccCceeCCC--CCEEEEEEC-CcEEEEecC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSK--PELKLSSSSCSPVIDPHLSSD--GTMIAFVRD-CELHVLNLL 198 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~--~~~~l~~~~~~~~~~~~~SpD--g~~la~~~~-~~l~~~~l~ 198 (776)
..+....|+| ||++|+.. .++.|.+||+.++. ....+..+.. .+..+.|+|+ |+.|+..+. +.|.+|++.
T Consensus 10 ~~V~~~~~s~---~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~-~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 10 EMIHDAVMDY---YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp SCEEEEEECT---TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSS-CEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred CceEEEEECC---CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccC-CeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 4688999999 99999976 68899999998643 2224554443 4788999874 888888774 579999999
Q ss_pred CCceeEEe-eCCCCCceecCCcccceecccCCcceEEECCC--CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecC
Q 004067 199 INEQRQLT-HGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD--SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 275 (776)
Q Consensus 199 ~g~~~~lt-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (776)
+++...+. ..... ..+..+.|+|| |+.|+..+.+
T Consensus 86 ~~~~~~~~~~~~h~----------------~~v~~v~~~p~~~g~~l~s~s~d--------------------------- 122 (297)
T 2pm7_B 86 NGRWSQIAVHAVHS----------------ASVNSVQWAPHEYGPMLLVASSD--------------------------- 122 (297)
T ss_dssp SSCBCCCEEECCCS----------------SCEEEEEECCGGGCSEEEEEETT---------------------------
T ss_pred CCceEEEEEeecCC----------------CceeEEEeCcCCCCcEEEEEECC---------------------------
Confidence 87533221 11110 11457899998 7888766543
Q ss_pred CCCCCCCCeEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEEEEEeccC-------------CeEEEEEEeecCceEEE
Q 004067 276 PFAGASNVKVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHG-------------NILTAQVLNRSQTKLKV 341 (776)
Q Consensus 276 ~~~g~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~SpD-------------g~~l~~~~~~~~~~~~l 341 (776)
..|.+||+.++... .... ..+...+..++|+|+ ++.|+..+ .+..|
T Consensus 123 ---------~~v~~wd~~~~~~~~~~~~-------~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs----~D~~v 182 (297)
T 2pm7_B 123 ---------GKVSVVEFKENGTTSPIII-------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG----ADNLV 182 (297)
T ss_dssp ---------SEEEEEEBCSSSCBCCEEE-------ECCSSCEEEEEECCCC------------CCEEEEEE----TTSCE
T ss_pred ---------CcEEEEEecCCCceeeeee-------ecccCccceEeecCCcccccccCCCCCCcceEEEEc----CCCcE
Confidence 34788998765321 1111 345667889999997 35666554 34458
Q ss_pred EEEECCCCceE-----EEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce----eecc--cc
Q 004067 342 LKFDIKTGQRK-----VILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC----LGPI--TE 410 (776)
Q Consensus 342 ~~~d~~~g~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~----~~~l--t~ 410 (776)
.+||+.++... .+..+...... -.|+|.. ..+.++++...++ .|.+|+++.+. ...+ ..
T Consensus 183 ~lwd~~~~~~~~~~~~~l~~H~~~V~~---v~~sp~~-----~~~~~las~s~D~--~v~iWd~~~~~~~~~~~~~~~~~ 252 (297)
T 2pm7_B 183 KIWKYNSDAQTYVLESTLEGHSDWVRD---VAWSPTV-----LLRSYMASVSQDR--TCIIWTQDNEQGPWKKTLLKEEK 252 (297)
T ss_dssp EEEEEETTTTEEEEEEEECCCSSCEEE---EEECCCC-----SSSEEEEEEETTS--CEEEEEESSTTSCCEEEESSSSC
T ss_pred EEEEEcCCCceEEEEEEecCCCCceEE---EEECCCC-----CCceEEEEEECCC--cEEEEEeCCCCCccceeeeeccc
Confidence 88998776521 12222222111 1233311 0134566666677 67778766532 1223 22
Q ss_pred CCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 411 GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 411 ~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
....+... .|+|+|+.|+..+. ++. +.||..+.
T Consensus 253 ~~~~v~~~-~~s~~g~~las~~~-D~~--v~lw~~~~ 285 (297)
T 2pm7_B 253 FPDVLWRA-SWSLSGNVLALSGG-DNK--VTLWKENL 285 (297)
T ss_dssp CSSCEEEE-EECSSSCCEEEEET-TSC--EEEEEECT
T ss_pred CCCcEEEE-EECCCCCEEEEEcC-CCc--EEEEEECC
Confidence 23345554 49999997655544 433 89998876
No 359
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.1e-11 Score=136.24 Aligned_cols=285 Identities=8% Similarity=-0.001 Sum_probs=159.4
Q ss_pred CCceeEcCC------CCEEEEEeCCCCcCcceEEEEecCCCceE--EeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 004067 57 PTSIGFSPD------DNLITYLLSPDHSLSRKVFSFDPKTCKQE--LVFSPPDGGLDENNISPEEKLRRERLRERGLGVT 128 (776)
Q Consensus 57 ~~~~~~SpD------G~~ia~~~~~~~~~~~~l~~~~~~~~~~~--~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 128 (776)
+..++|||+ |+.||-.+.+ ..|.+||+.+++.. ....... ....+. .+...+.
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~D-----gtvrlWd~~~~~~~~~~~~~~~~---p~~~l~-----------~h~~~v~ 270 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQE-----GTINFLEIIDNATDVHVFKMCEK---PSLTLS-----------LADSLIT 270 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETT-----SCEEEEECCCCSSSSSEEECCCS---CSEEEC-----------CTTTCEE
T ss_pred EEEEEECCCCCCCCCCceEEEEecC-----CeEEEEEcCCCccccccceeecC---ceEEEE-----------cCCCCEE
Confidence 478899997 5788866552 36999999876421 0000000 000000 0123688
Q ss_pred eEEEeecCCCceEEEE-eCCCcEEEEeCCCCcc-ceecCCCCCCCccCc--eeCCCC-CEEEEEEC-CcEEEEecCCCce
Q 004067 129 RYEWVKTSSKKKIIMV-PLPDGIYFQDLSCSKP-ELKLSSSSCSPVIDP--HLSSDG-TMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 129 ~~~~sp~~~dg~~l~~-~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~--~~SpDg-~~la~~~~-~~l~~~~l~~g~~ 202 (776)
.+.|+| ++. |+. ..++.|.+||+.+++. ...+..+.. .+..+ .|+||| +.||-.+. +.|.+||+.+++.
T Consensus 271 sv~~s~---~~~-lasgs~DgtV~lWD~~~~~~~~~~~~~H~~-~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 271 TFDFLS---PTT-VVCGFKNGFVAEFDLTDPEVPSFYDQVHDS-YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp EEEESS---SSE-EEEEETTSEEEEEETTBCSSCSEEEECSSS-CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH
T ss_pred EEEecC---CCe-EEEEeCCCEEEEEECCCCCCceEEeecccc-cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc
Confidence 999998 764 554 4889999999997643 212333333 46666 689998 77777764 5699999988764
Q ss_pred eE-EeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 203 RQ-LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 203 ~~-lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
.. +...... ..+..++||||++.++....+
T Consensus 346 ~~~~~~~~~~----------------~~v~~v~fsp~~~~l~s~~~d--------------------------------- 376 (524)
T 2j04_B 346 TKTTVSRFRG----------------SNLVPVVYCPQIYSYIYSDGA--------------------------------- 376 (524)
T ss_dssp HCEEEEECSC----------------CSCCCEEEETTTTEEEEECSS---------------------------------
T ss_pred cccccccccc----------------CcccceEeCCCcCeEEEeCCC---------------------------------
Confidence 32 2111100 003468899999987754432
Q ss_pred CCeEEEEEEEcCCCce-EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec--
Q 004067 282 NVKVRLGVVSAAGGPV-SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-- 358 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-- 358 (776)
..+.+||+.++.. ..+ .++...+..++|||||+.|+..+ .+..|.+||+..+.........
T Consensus 377 ---~tv~lwd~~~~~~~~~l---------~gH~~~V~sva~Sp~g~~l~Sgs----~Dgtv~lwd~~~~~~~~~~~~~~~ 440 (524)
T 2j04_B 377 ---SSLRAVPSRAAFAVHPL---------VSRETTITAIGVSRLHPMVLAGS----ADGSLIITNAARRLLHGIKNSSAT 440 (524)
T ss_dssp ---SEEEEEETTCTTCCEEE---------EECSSCEEEEECCSSCCBCEEEE----TTTEEECCBSCSSTTTCC------
T ss_pred ---CcEEEEECcccccceee---------ecCCCceEEEEeCCCCCeEEEEE----CCCEEEEEechHhhccccccCccc
Confidence 2478999988764 334 45677899999999999777665 4556899998665332211100
Q ss_pred -c--CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCc--EEEEEEc
Q 004067 359 -L--DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASG--QVYFTGT 433 (776)
Q Consensus 359 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~--~i~~~~~ 433 (776)
. ..|.. .|+| +++.+ ....+ ..++.++..+.....+..+...|..+ .|+|++. .++..++
T Consensus 441 ~~~~~v~~v---~~sp--------~g~~~-~~~~~--~~~~~~~~~g~~~~~l~gh~~~V~~V-afsp~~~~~~~lAsg~ 505 (524)
T 2j04_B 441 QKSLRLWKW---DYSI--------KDDKY-RIDSS--YEVYPLTVNDVSKAKIDAHGINITCT-KWNETSAGGKCYAFSN 505 (524)
T ss_dssp CCCCEEEEC---BCCS--------SSCEE-EECCC--CCCCC-------------CCCSCCCE-EECCSTTTTTEEEEEC
T ss_pred eeeeEEEEe---ccCC--------CCCeE-EccCC--ceecccccCCcceeeecCCCceEEEE-ECCCCCCccHHHHhhc
Confidence 0 01111 1333 12222 22111 12333334455566676666666666 4999964 2455555
Q ss_pred cCCCceeeEEEEEe
Q 004067 434 LDGPLESHLYCAKL 447 (776)
Q Consensus 434 ~~~~~~~~l~~~~~ 447 (776)
.++. ++||.+.+
T Consensus 506 ~~g~--vrlw~l~~ 517 (524)
T 2j04_B 506 SAGL--LTLEYLSL 517 (524)
T ss_dssp TTSE--EEEEECSC
T ss_pred cCce--EEEEEccc
Confidence 5543 78887764
No 360
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.36 E-value=3.7e-10 Score=121.95 Aligned_cols=243 Identities=10% Similarity=0.065 Sum_probs=146.1
Q ss_pred CCeeeEEEeecCCCc-eEEEEe-CCCcEEEEeCCC----------CccceecCCCCCCCccCceeCCCCC-EEEEEE-CC
Q 004067 125 LGVTRYEWVKTSSKK-KIIMVP-LPDGIYFQDLSC----------SKPELKLSSSSCSPVIDPHLSSDGT-MIAFVR-DC 190 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg-~~l~~~-~~~~l~~~d~~~----------~~~~~~l~~~~~~~~~~~~~SpDg~-~la~~~-~~ 190 (776)
..+....|+| ++ +.|+.. .++.|++||+.. ......+..+.. .+..+.|+|+++ .|+... ++
T Consensus 129 ~~v~~l~~~p---~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 129 GEVNRARYMP---QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-EGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp SCCSEEEEET---TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-CCCCEEECTTSTTEEEEECTTS
T ss_pred CcEEEEEECC---CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC-CeEEEEeCCCCCCeEEEEeCCC
Confidence 4688899999 85 455544 578899999976 232223333333 478899999999 665554 35
Q ss_pred cEEEEecCCCce--eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCC
Q 004067 191 ELHVLNLLINEQ--RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSE 268 (776)
Q Consensus 191 ~l~~~~l~~g~~--~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (776)
.|.+|++.++.. ..+.... ...+. ...+..+.|+|++..+++.....
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~----~~~~h--------~~~v~~v~~~p~~~~~l~s~~~d------------------- 253 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKN----IFTGH--------TAVVEDVAWHLLHESLFGSVADD------------------- 253 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSE----EECCC--------SSCEEEEEECSSCTTEEEEEETT-------------------
T ss_pred eEEEEeCCCCCCCCceeccce----eecCC--------CCCEeeeEEeCCCCCEEEEEeCC-------------------
Confidence 799999987422 1110000 00000 11255789999655454443221
Q ss_pred CcceecCCCCCCCCCeEEEEEEEcCCCc----eEEEEcccCCCCCCCCcceEEEEEeccCCeE-EEEEEeecCceEEEEE
Q 004067 269 AQEDHAYPFAGASNVKVRLGVVSAAGGP----VSWMDLQCGGTDQNYDEEYLARVNWMHGNIL-TAQVLNRSQTKLKVLK 343 (776)
Q Consensus 269 ~~~~~~~~~~g~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~-l~~~~~~~~~~~~l~~ 343 (776)
..|++||+.++. ...+ ..+...+..++|+|+++. ++... .+..|.+
T Consensus 254 ----------------g~i~i~d~~~~~~~~~~~~~---------~~~~~~v~~i~~~p~~~~~l~tg~----~dg~v~v 304 (430)
T 2xyi_A 254 ----------------QKLMIWDTRNNNTSKPSHTV---------DAHTAEVNCLSFNPYSEFILATGS----ADKTVAL 304 (430)
T ss_dssp ----------------SEEEEEETTCSCSSSCSEEE---------ECCSSCEEEEEECSSCTTEEEEEE----TTSEEEE
T ss_pred ----------------CeEEEEECCCCCCCcceeEe---------ecCCCCeEEEEeCCCCCCEEEEEe----CCCeEEE
Confidence 358999998763 2222 245567889999999984 44443 3456999
Q ss_pred EECCCC-c-eEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCC---------------ceee
Q 004067 344 FDIKTG-Q-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDING---------------TCLG 406 (776)
Q Consensus 344 ~d~~~g-~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g---------------~~~~ 406 (776)
||+.+. . ...+..+....+.. .|+| ++..+++++..+| .|.+|++.. ....
T Consensus 305 wd~~~~~~~~~~~~~h~~~v~~i---~~sp-------~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 372 (430)
T 2xyi_A 305 WDLRNLKLKLHSFESHKDEIFQV---QWSP-------HNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLF 372 (430)
T ss_dssp EETTCTTSCSEEEECCSSCEEEE---EECS-------SCTTEEEEEETTS--CCEEEEGGGTTCCCCHHHHHHCCTTEEE
T ss_pred EeCCCCCCCeEEeecCCCCEEEE---EECC-------CCCCEEEEEeCCC--cEEEEeCCCCccccCccccccCCcceEE
Confidence 999873 3 33443333332221 1333 2334666666677 788888764 2222
Q ss_pred ccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 407 PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 407 ~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
.+..+...+..+. |++++++++++...++ .+.+|+++
T Consensus 373 ~~~~h~~~v~~~~-~~p~~~~~l~s~s~dg--~i~iw~~~ 409 (430)
T 2xyi_A 373 IHGGHTAKISDFS-WNPNEPWIICSVSEDN--IMQVWQMA 409 (430)
T ss_dssp ECCCCSSCEEEEE-ECSSSTTEEEEEETTS--EEEEEEEC
T ss_pred EcCCCCCCceEEE-ECCCCCCEEEEEECCC--CEEEeEcc
Confidence 3333444566665 9999996666666654 37888886
No 361
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.36 E-value=2.1e-10 Score=119.20 Aligned_cols=254 Identities=8% Similarity=0.004 Sum_probs=150.4
Q ss_pred CeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC-----cEEEEecCC
Q 004067 126 GVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC-----ELHVLNLLI 199 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~-----~l~~~~l~~ 199 (776)
....+.|+| ||+.++.. .++.|++||.++++.+ .+.......+..+.++|||+.++..... .|+++++++
T Consensus 46 ~~~~~~~~~---~g~l~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 46 QLEGLNFDR---QGQLFLLDVFEGNIFKINPETKEIK-RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp CEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEE-EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred cccCcEECC---CCCEEEEECCCCEEEEEeCCCCcEE-EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 456789999 99944443 5678999999998877 4432222347788999999866555443 699999999
Q ss_pred CceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCC
Q 004067 200 NEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAG 279 (776)
Q Consensus 200 g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (776)
+..+.+...... + .....+.++|||+ |++.......
T Consensus 122 ~~~~~~~~~~~~-----~----------~~~~~i~~d~~g~-l~v~~~~~~~---------------------------- 157 (333)
T 2dg1_A 122 DNLQDIIEDLST-----A----------YCIDDMVFDSKGG-FYFTDFRGYS---------------------------- 157 (333)
T ss_dssp CSCEEEECSSSS-----C----------CCEEEEEECTTSC-EEEEECCCBT----------------------------
T ss_pred CEEEEEEccCcc-----C----------CcccceEECCCCC-EEEEeccccc----------------------------
Confidence 887644322110 0 0134678999996 4444321100
Q ss_pred CCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC-Cc-eEEEEEe
Q 004067 280 ASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-GQ-RKVILVE 357 (776)
Q Consensus 280 ~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~-g~-~~~l~~~ 357 (776)
......|+.++.++++...+.. .......++|+|||+.+++.... ...|++||+++ |. ...+...
T Consensus 158 -~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~i~~~~dg~~l~v~~~~---~~~i~~~d~~~~g~~~~~~~~~ 224 (333)
T 2dg1_A 158 -TNPLGGVYYVSPDFRTVTPIIQ---------NISVANGIALSTDEKVLWVTETT---ANRLHRIALEDDGVTIQPFGAT 224 (333)
T ss_dssp -TBCCEEEEEECTTSCCEEEEEE---------EESSEEEEEECTTSSEEEEEEGG---GTEEEEEEECTTSSSEEEEEEE
T ss_pred -cCCCceEEEEeCCCCEEEEeec---------CCCcccceEECCCCCEEEEEeCC---CCeEEEEEecCCCcCcccccce
Confidence 0012568899988877766522 12235678999999877665422 33689999853 33 3322111
Q ss_pred ccCceeecccccccCCCCccccCCeEEEEec-cCCceEEEEEeCCCceeeccccCCe------EEEEEEeecCCCcEEEE
Q 004067 358 ELDSWVNLHDCFTPLDKGVTKYSGGFIWASE-KTGFRHLYLHDINGTCLGPITEGDW------MVEQIVGVNEASGQVYF 430 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~g~~~l~~~~~~g~~~~~lt~~~~------~~~~~~~~s~dg~~i~~ 430 (776)
.. ....... .+.++..++++-+|++. .++ .|++++++++....+..... .+..+ .|++||+.||+
T Consensus 225 ~~---~~~~~~~--~~~~i~~d~~G~l~v~~~~~~--~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~-~~~~dg~~L~v 296 (333)
T 2dg1_A 225 IP---YYFTGHE--GPDSCCIDSDDNLYVAMYGQG--RVLVFNKRGYPIGQILIPGRDEGHMLRSTHP-QFIPGTNQLII 296 (333)
T ss_dssp EE---EECCSSS--EEEEEEEBTTCCEEEEEETTT--EEEEECTTSCEEEEEECTTGGGTCSCBCCEE-EECTTSCEEEE
T ss_pred EE---EecCCCC--CCCceEECCCCCEEEEEcCCC--EEEEECCCCCEEEEEEcCCCccccccCcceE-EECCCCCEEEE
Confidence 00 0000000 01112334444444443 334 89999998776666654322 23444 48899988888
Q ss_pred EEccCC-CceeeEEEEEeC
Q 004067 431 TGTLDG-PLESHLYCAKLY 448 (776)
Q Consensus 431 ~~~~~~-~~~~~l~~~~~~ 448 (776)
.+.... +....||++++.
T Consensus 297 ~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 297 CSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EEECGGGTCCEEEEEEECS
T ss_pred EeCccCCCCCceEEEEecc
Confidence 776421 233689999974
No 362
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.36 E-value=4.5e-11 Score=123.19 Aligned_cols=254 Identities=11% Similarity=0.036 Sum_probs=145.7
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceE---EeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEe
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQE---LVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWV 133 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~---~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s 133 (776)
+..++|||||++||-.+. ...|.+||+.+++.. .+..|. ..+....|+
T Consensus 16 V~~v~~s~~g~~lasgs~-----D~~v~lwd~~~~~~~~~~~l~gH~------------------------~~V~~v~~~ 66 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSS-----DRSVKIFDVRNGGQILIADLRGHE------------------------GPVWQVAWA 66 (316)
T ss_dssp EEEEEECGGGCEEEEEET-----TTEEEEEEEETTEEEEEEEEECCS------------------------SCEEEEEEC
T ss_pred EEEeeEcCCCCEEEEEeC-----CCeEEEEEecCCCcEEEEEEcCCC------------------------ccEEEEEeC
Confidence 478999999999986554 247999999877532 333332 368899998
Q ss_pred ecCCC--ceEEEEe-CCCcEEEEeCCCCccc--eecCCCCCCCccCceeCCC--CCEEEEEEC-CcEEEEecCCCceeEE
Q 004067 134 KTSSK--KKIIMVP-LPDGIYFQDLSCSKPE--LKLSSSSCSPVIDPHLSSD--GTMIAFVRD-CELHVLNLLINEQRQL 205 (776)
Q Consensus 134 p~~~d--g~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~SpD--g~~la~~~~-~~l~~~~l~~g~~~~l 205 (776)
| + |+.|+.. .++.|.+||+.+++.. ..+..+. ..+..+.|+|| |..|+..+. +.|.+|++.++....+
T Consensus 67 ~---~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~-~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 67 H---PMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHD-SSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp C---GGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCS-SCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred C---CCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCC-CceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 6 4 7777765 7899999999987533 1333333 34788999998 777776653 5799999887642211
Q ss_pred -eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCe
Q 004067 206 -THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVK 284 (776)
Q Consensus 206 -t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 284 (776)
..... .. ..+..+.|+|++..-.+.....+... ....+-..|. ..
T Consensus 143 ~~~~~~-------h~--------~~v~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~l~sgs--~D 188 (316)
T 3bg1_A 143 KKINNA-------HT--------IGCNAVSWAPAVVPGSLIDHPSGQKP-----------------NYIKRFASGG--CD 188 (316)
T ss_dssp CCBTTS-------SS--------SCBCCCEECCCCCC------CCSCCC-----------------CCCCBEECCB--TT
T ss_pred eeeecc-------cc--------CCcceEEEccccCCccccccccccCc-----------------cccceEEEec--CC
Confidence 11110 00 11446789998421000000000000 0000000000 01
Q ss_pred EEEEEEEcCCCc-eEEEEcccCCCCCCCCcceEEEEEeccCC----eEEEEEEeecCceEEEEEEECCCC---c--eEEE
Q 004067 285 VRLGVVSAAGGP-VSWMDLQCGGTDQNYDEEYLARVNWMHGN----ILTAQVLNRSQTKLKVLKFDIKTG---Q--RKVI 354 (776)
Q Consensus 285 ~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~SpDg----~~l~~~~~~~~~~~~l~~~d~~~g---~--~~~l 354 (776)
..|.+||+.++. ...+.. +..+...+..++|+||+ +.|+..+ .+..|.+|+++++ . .+.+
T Consensus 189 ~~v~lWd~~~~~~~~~~~~------l~~h~~~V~~v~~sp~~~~~~~~las~s----~D~~v~iw~~~~~~~~~~~~~~~ 258 (316)
T 3bg1_A 189 NLIKLWKEEEDGQWKEEQK------LEAHSDWVRDVAWAPSIGLPTSTIASCS----QDGRVFIWTCDDASSNTWSPKLL 258 (316)
T ss_dssp SBCCEEEECTTSCEEEEEC------CBCCSSCEEEEECCCCSSCSCCEEEEEE----TTCEEEEEECSSTTCCCCBCCEE
T ss_pred CeEEEEEeCCCCccceeee------cccCCCceEEEEecCCCCCCCceEEEEc----CCCeEEEEEccCccccchhhhhh
Confidence 346888887543 222222 24567789999999997 6676665 4567999998763 1 2334
Q ss_pred EEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeC
Q 004067 355 LVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDI 400 (776)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~ 400 (776)
..+....|.. .|+| ++.+++++..+| .|.+|+.
T Consensus 259 ~~~~~~v~~v---~~sp--------~g~~las~~~D~--~v~lw~~ 291 (316)
T 3bg1_A 259 HKFNDVVWHV---SWSI--------TANILAVSGGDN--KVTLWKE 291 (316)
T ss_dssp EECSSCEEEE---EECT--------TTCCEEEEESSS--CEEEEEE
T ss_pred hcCCCcEEEE---EEcC--------CCCEEEEEcCCC--eEEEEEE
Confidence 3333333322 2333 233556666677 5666664
No 363
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.35 E-value=7.8e-11 Score=127.57 Aligned_cols=219 Identities=7% Similarity=-0.092 Sum_probs=129.1
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCC---Cccc-eecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSC---SKPE-LKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLL 198 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~---~~~~-~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~ 198 (776)
..+....|+| .||+.|+.. .++.|.+||+.+ +... ..++......+..+.|+||++.|+..+. +.|.+|+++
T Consensus 64 ~~V~~~~~s~--~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 64 NSITSSAVSP--GETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVN 141 (437)
T ss_dssp SCEEEEEEEC--SSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEE
T ss_pred CceEEEEECC--CCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEec
Confidence 4688899987 246777765 788999999877 4311 0122112334888999999999988875 578999884
Q ss_pred ---CCceeEEeeCCCCCceecCCcccceecccCCcc--eEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCccee
Q 004067 199 ---INEQRQLTHGANGNTVTHGLAEYIAQEEMDRKT--GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 273 (776)
Q Consensus 199 ---~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~--~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (776)
+++.........- .... +.......... ...++||++.|+....+
T Consensus 142 ~~~~~~~~~~~~~~~i-~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------------------------- 191 (437)
T 3gre_A 142 HYQQESEVKFLNCECI-RKIN----LKNFGKNEYAVRMRAFVNEEKSLLVALTNL------------------------- 191 (437)
T ss_dssp EEEETTEEEEEEEEEE-EEEE----GGGGSSCCCEEEEEEEECSSCEEEEEEETT-------------------------
T ss_pred cccCCceeecccccee-EEEE----ccCcccccCceEEEEEEcCCCCEEEEEeCC-------------------------
Confidence 4443332211100 0000 00000000111 23377888888776643
Q ss_pred cCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEE
Q 004067 274 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV 353 (776)
Q Consensus 274 ~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~ 353 (776)
..|.+||+.+++....-.. ..+...+..++|+|||+.++..+ .+..|.+||+.+++...
T Consensus 192 -----------~~i~iwd~~~~~~~~~~~~------~~h~~~v~~~~~s~~~~~l~s~~----~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 192 -----------SRVIIFDIRTLERLQIIEN------SPRHGAVSSICIDEECCVLILGT----TRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp -----------SEEEEEETTTCCEEEEEEC------CGGGCCEEEEEECTTSCEEEEEE----TTSCEEEEETTTTEEEE
T ss_pred -----------CeEEEEeCCCCeeeEEEcc------CCCCCceEEEEECCCCCEEEEEc----CCCeEEEEEcCCccEEE
Confidence 3589999998876443211 12567899999999999887766 34569999999877644
Q ss_pred EEEeccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCce
Q 004067 354 ILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTC 404 (776)
Q Consensus 354 l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~ 404 (776)
.........+ ..-.+.| .+.+ +.++++...+| .|.+||+.+++
T Consensus 251 ~~~~~~~~~v-~~~~~~~-----~~s~~~~~l~s~~~dg--~i~iwd~~~~~ 294 (437)
T 3gre_A 251 SWSFGDHAPI-THVEVCQ-----FYGKNSVIVVGGSSKT--FLTIWNFVKGH 294 (437)
T ss_dssp EEBCTTCEEE-EEEEECT-----TTCTTEEEEEEESTTE--EEEEEETTTTE
T ss_pred EEecCCCCce-EEEEecc-----ccCCCccEEEEEcCCC--cEEEEEcCCCc
Confidence 3321111110 0001222 1222 33566666666 89999988665
No 364
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.35 E-value=7e-13 Score=135.57 Aligned_cols=199 Identities=12% Similarity=0.000 Sum_probs=120.9
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHH-HHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAE-WLI 630 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~-~l~ 630 (776)
...|.||++||.+++... ..|..++..|. .+|.|+++|+||+|.+... ...++++.+.+. .+.
T Consensus 65 ~~~~~lvllhG~~~~~~~-----~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~----------~~~~~~~a~~~~~~l~ 128 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGP-----HEFTRLAGALR-GIAPVRAVPQPGYEEGEPL----------PSSMAAVAAVQADAVI 128 (300)
T ss_dssp SCSSEEEECCCSSTTCST-----TTTHHHHHHTS-SSCCBCCCCCTTSSTTCCB----------CSSHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcccCcH-----HHHHHHHHhcC-CCceEEEecCCCCCCCCCC----------CCCHHHHHHHHHHHHH
Confidence 355899999997664310 12334455554 4699999999999986431 123445544433 444
Q ss_pred HcCCCCCCcEEEEeechHHHHHHHHHhhCC---CceEEEEEcCCCCCccc-c-c---ccccccccCCCC--CCc------
Q 004067 631 KQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSWDG-Y-D---TFYTEKYMGLPS--EDP------ 694 (776)
Q Consensus 631 ~~~~id~~~i~l~G~S~GG~~a~~~a~~~~---~~~~~~v~~~~~~~~~~-~-~---~~~~~~~~~~~~--~~~------ 694 (776)
+.. +..++.|+||||||.+++.++.++| +.++++|+.++...... . . ......++..+. ...
T Consensus 129 ~~~--~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (300)
T 1kez_A 129 RTQ--GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTAL 206 (300)
T ss_dssp HHC--SSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHHHH
T ss_pred Hhc--CCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHHHH
Confidence 432 4468999999999999999999987 47899999887654221 0 0 000111111110 000
Q ss_pred cchhcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHC-CCCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHH
Q 004067 695 VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA-RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 773 (776)
Q Consensus 695 ~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 773 (776)
..+...-......++++|+|+++|. |..+++.. .. +.+. ....+++++++ +|.....+....+.+.+.+||.
T Consensus 207 ~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~----~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~ 279 (300)
T 1kez_A 207 GAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DS----WKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLG 279 (300)
T ss_dssp HHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SC----CSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cc----hhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHHHHH
Confidence 0000000001236778999999995 66666543 22 2121 23578999999 9987433778899999999996
Q ss_pred Hh
Q 004067 774 RT 775 (776)
Q Consensus 774 ~~ 775 (776)
+.
T Consensus 280 ~~ 281 (300)
T 1kez_A 280 GG 281 (300)
T ss_dssp CC
T ss_pred hc
Confidence 53
No 365
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.35 E-value=2.6e-11 Score=122.83 Aligned_cols=213 Identities=14% Similarity=0.094 Sum_probs=126.6
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECC--------CCCCCCchhh
Q 004067 535 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--------RGTARRGLKF 606 (776)
Q Consensus 535 ~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--------rg~g~~~~~~ 606 (776)
..+.+.+|.|... ++.|+||.+||+. + ....||+++.+++ +|+.+.+. |
T Consensus 123 ~sf~~~i~lP~g~----~P~Pvii~~~~~~--------~----------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f 179 (433)
T 4g4g_A 123 ISFSASIRKPSGA----GPFPAIIGIGGAS--------I----------PIPSNVATITFNNDEFGAQMGSGSRGQGK-F 179 (433)
T ss_dssp EEEEEEEECCSSS----CCEEEEEEESCCC--------S----------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-H
T ss_pred EEEEEEEECCCCC----CCccEEEEECCCc--------c----------ccCCCeEEEEeCCcccccccCCCcCCccc-c
Confidence 3469999999763 6899999999731 1 1357999999986 22223333 3
Q ss_pred hhhh--hhccCCcc--HHHHHHHHHHHHH----cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCC----
Q 004067 607 EASI--KHNCGRID--AEDQLTGAEWLIK----QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---- 674 (776)
Q Consensus 607 ~~~~--~~~~~~~~--~~D~~~~i~~l~~----~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~---- 674 (776)
.... ...++... ..++.+++++|.+ ++.||++||+++|||+||..|+++++..+ +|+++|+..+..+
T Consensus 180 ~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~G~~~ 258 (433)
T 4g4g_A 180 YDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAGGAAC 258 (433)
T ss_dssp HHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTTTTSC
T ss_pred ccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCCchhh
Confidence 2211 12233222 3589999999999 88899999999999999999999999865 6899988765432
Q ss_pred ccccc--cccccc------ccC-CCCCCc--cchh------cCChhhhhccC-CCcEEEEecCCCCccChHHHHHHHHHH
Q 004067 675 WDGYD--TFYTEK------YMG-LPSEDP--VGYE------YSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINAL 736 (776)
Q Consensus 675 ~~~~~--~~~~~~------~~~-~~~~~~--~~~~------~~~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~l 736 (776)
++... ..+.+. ..+ ..|... ..|. ..+....++-+ ..|+|++.| .|..+++......+..+
T Consensus 259 ~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~g~~~a~~aa 337 (433)
T 4g4g_A 259 WRISDQQKAAGANIQTAAQIITENPWFSRNFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPVSTTGCMAAG 337 (433)
T ss_dssp HHHHHHHHHTTCCCCCHHHHTTTCCCSCTTTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHHHHHHHHHHH
T ss_pred hhhchhhcccCcchhhhhcccCCccccchhhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCCcHHHHHHHHHH
Confidence 22100 000000 000 111111 1111 01111222222 369999999 88888876444333322
Q ss_pred ----HHCC--CCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 004067 737 ----VAAR--KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 776 (776)
Q Consensus 737 ----~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 776 (776)
+..| .++.+...++.+|+....+. ...+.+||+++|
T Consensus 338 ~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~~----r~~~~~F~~k~L 379 (433)
T 4g4g_A 338 RLIYKAYGVPNNMGFSLVGGHNHCQFPSSQ----NQDLNSYINYFL 379 (433)
T ss_dssp HHHHHHHTCGGGEEEEECCSSCTTCCCGGG----HHHHHHHHHHHT
T ss_pred HHHHHHcCCccceEEEeeCCCCcccCCHHH----HHHHHHHHHHHh
Confidence 2234 35667665555665423333 366777887776
No 366
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=99.35 E-value=1.4e-12 Score=128.87 Aligned_cols=195 Identities=15% Similarity=0.177 Sum_probs=113.2
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
+.|.|+++||.+++.. .|..++..|.+ +|.|+++|+||+|.+... ...|+.+.++.+.+.
T Consensus 12 ~~~~lv~lhg~g~~~~-------~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~------------~~~~~~~~~~~~~~~ 71 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSA-------SFRPLHAFLQG-ECEMLAAEPPGHGTNQTS------------AIEDLEELTDLYKQE 71 (242)
T ss_dssp CCCEEESSCCCCHHHH-------HHHHHHHHHCC-SCCCEEEECCSSCCSCCC------------TTTHHHHHHHHTTTT
T ss_pred CCceEEEECCCCCCHH-------HHHHHHHhCCC-CeEEEEEeCCCCCCCCCC------------CcCCHHHHHHHHHHH
Confidence 4467899999776543 34455666654 799999999999988531 134566666655543
Q ss_pred CCCC-CCcEEEEeechHHHHHHHHHhh------CCCceEEEEEcCCCCCccc---c-cccccccc---cCCCCCC-----
Q 004067 633 GLAK-VGHIGLYGWSYGGYLSAITLAR------FPDVFQCAVSGAPVTSWDG---Y-DTFYTEKY---MGLPSED----- 693 (776)
Q Consensus 633 ~~id-~~~i~l~G~S~GG~~a~~~a~~------~~~~~~~~v~~~~~~~~~~---~-~~~~~~~~---~~~~~~~----- 693 (776)
-.+. ..++.++||||||.+|+.+|.+ +|+.+-......|...... . ...+...+ ...+...
T Consensus 72 l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (242)
T 2k2q_B 72 LNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKE 151 (242)
T ss_dssp CCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHH
T ss_pred HHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHH
Confidence 2221 2589999999999999999986 5665321111112111000 0 00000000 0111100
Q ss_pred -----c----cch---hcCChhhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcH
Q 004067 694 -----P----VGY---EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 761 (776)
Q Consensus 694 -----~----~~~---~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 761 (776)
. ..+ ..... ..+.++++|+|+++|++|..++ .... .+.+.-....++++++ ||.+ ..+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~~----~~~~~~~~~~~~~~~~-gH~~-~~e~p 223 (242)
T 2k2q_B 152 VMSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI-RDAE----GWKKWAKDITFHQFDG-GHMF-LLSQT 223 (242)
T ss_dssp TTTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH-HHHH----HHHTTCCCSEEEEEEC-CCSH-HHHHC
T ss_pred HHHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH-HHHH----HHHHHhcCCeEEEEeC-Ccee-EcCCH
Confidence 0 000 00011 1145788999999999998754 2222 2333334456788875 9976 45667
Q ss_pred HHHHHHHHHHHHHh
Q 004067 762 IYMEERIWEFIERT 775 (776)
Q Consensus 762 ~~~~~~~~~fl~~~ 775 (776)
+++.+.+.+||++.
T Consensus 224 ~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 224 EEVAERIFAILNQH 237 (242)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcc
Confidence 88999999999753
No 367
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.34 E-value=9.8e-12 Score=121.48 Aligned_cols=198 Identities=14% Similarity=0.091 Sum_probs=120.0
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhCC---cEEEEECCCCCCC--Cchhh----hhhh-----hhccC-----
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG---ILVWKLDNRGTAR--RGLKF----EASI-----KHNCG----- 615 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G---~~v~~~d~rg~g~--~~~~~----~~~~-----~~~~~----- 615 (776)
+.|||+||.+++.. .|..++..|++.| +.|+.+|.+++|. +...+ ..+. .....
T Consensus 5 ~pvv~iHG~~~~~~-------~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~ 77 (250)
T 3lp5_A 5 APVIMVPGSSASQN-------RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANI 77 (250)
T ss_dssp CCEEEECCCGGGHH-------HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHH
T ss_pred CCEEEECCCCCCHH-------HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCH
Confidence 56788999776644 4556788888776 6777766655553 11100 0000 00000
Q ss_pred CccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC-----CCceEEEEEcCCCCCcccccccccccccCCC
Q 004067 616 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-----PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP 690 (776)
Q Consensus 616 ~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 690 (776)
....+++.++++.+.++. ...++.++||||||.+++.++.++ ++.++.+|.+++..+..... +
T Consensus 78 ~~~a~~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~----------~ 145 (250)
T 3lp5_A 78 DKQAVWLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS----------T 145 (250)
T ss_dssp HHHHHHHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC----------S
T ss_pred HHHHHHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc----------c
Confidence 012467778888887765 346899999999999999999876 56788888776543321100 0
Q ss_pred CCCccchhcC-ChhhhhccCCCcEEEEecC----CCCccChHHHHHHHHHHHHCCCCeEEEEec--CCCCCCCCCCcHHH
Q 004067 691 SEDPVGYEYS-SVMHHVHKMKGKLLLVHGM----IDENVHFRHTARLINALVAARKPYEILIFP--DERHMPRRHRDRIY 763 (776)
Q Consensus 691 ~~~~~~~~~~-~~~~~~~~i~~P~lii~G~----~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~--~~~H~~~~~~~~~~ 763 (776)
......|... .....+++ +.|+|+|+|. .|.+||...+..+...+.........+.+. +++|... .++ .+
T Consensus 146 ~~~~~~~~~l~~~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l-~e~-~~ 222 (250)
T 3lp5_A 146 TAKTSMFKELYRYRTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDL-PQN-KQ 222 (250)
T ss_dssp SCCCHHHHHHHHTGGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCH-HHH-HH
T ss_pred cccCHHHHHHHhccccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcc-hhC-HH
Confidence 0011111100 00112222 5899999999 899999988877766664333344444554 4679773 333 37
Q ss_pred HHHHHHHHHHH
Q 004067 764 MEERIWEFIER 774 (776)
Q Consensus 764 ~~~~~~~fl~~ 774 (776)
+.+.+.+||.+
T Consensus 223 v~~~I~~FL~~ 233 (250)
T 3lp5_A 223 IVSLIRQYLLA 233 (250)
T ss_dssp HHHHHHHHTSC
T ss_pred HHHHHHHHHhc
Confidence 88999999853
No 368
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.34 E-value=2.1e-12 Score=129.34 Aligned_cols=197 Identities=13% Similarity=0.066 Sum_probs=114.2
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
..|.|+++||++++.. .|..++. | ..+|.|+++|+||++.+... ...++++.+.+..++..
T Consensus 20 ~~~~lv~lhg~~~~~~-------~~~~~~~-l-~~~~~v~~~d~~G~~~~~~~----------~~~~~~~~~~~~~~i~~ 80 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAF-------SYASLPR-L-KSDTAVVGLNCPYARDPENM----------NCTHGAMIESFCNEIRR 80 (265)
T ss_dssp SSEEEEEECCTTCCGG-------GGTTSCC-C-SSSEEEEEEECTTTTCGGGC----------CCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHH-------HHHHHHh-c-CCCCEEEEEECCCCCCCCCC----------CCCHHHHHHHHHHHHHH
Confidence 4578999999877654 2233355 5 67899999999997533211 12244444333322222
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHh---hCCCceEEEEEcCCCCCcc--ccc---cccccc---ccCCC-------CCCc
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLA---RFPDVFQCAVSGAPVTSWD--GYD---TFYTEK---YMGLP-------SEDP 694 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~---~~~~~~~~~v~~~~~~~~~--~~~---~~~~~~---~~~~~-------~~~~ 694 (776)
.. ...++.++||||||.+|+.++. .+++.+.++++.++..... ... ..+.+. +.+.+ .+..
T Consensus 81 ~~-~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T 3ils_A 81 RQ-PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPP 159 (265)
T ss_dssp HC-SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSCSCCC
T ss_pred hC-CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCCHHHH
Confidence 11 2358999999999999999998 6788888888876543211 000 000000 11100 0000
Q ss_pred cch-----------hcCChhhhhccCCCcEE-EEecCC---CCccC--------------hHHHHHHHHHHHHCCCCeEE
Q 004067 695 VGY-----------EYSSVMHHVHKMKGKLL-LVHGMI---DENVH--------------FRHTARLINALVAARKPYEI 745 (776)
Q Consensus 695 ~~~-----------~~~~~~~~~~~i~~P~l-ii~G~~---D~~v~--------------~~~~~~~~~~l~~~~~~~~~ 745 (776)
..+ ..+. .....++++|++ +++|++ |..++ ......+.+.+ .+.++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~--~~~~~~~ 236 (265)
T 3ils_A 160 SYLIPHFTAVVDVMLDYK-LAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIM--PGASFDI 236 (265)
T ss_dssp TTHHHHHHHHHHHTTTCC-CCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHS--TTCCEEE
T ss_pred HHHHHHHHHHHHHHHhcC-CCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhC--CccceeE
Confidence 000 0001 111246788988 999999 98873 22223332222 1247899
Q ss_pred EEecCCCCCCC-CCCcHHHHHHHHHHHH
Q 004067 746 LIFPDERHMPR-RHRDRIYMEERIWEFI 772 (776)
Q Consensus 746 ~~~~~~~H~~~-~~~~~~~~~~~~~~fl 772 (776)
++++++||.+. ..+..+++.+.+.+||
T Consensus 237 ~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 237 VRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred EEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 99999999763 1567777777777775
No 369
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.34 E-value=1.7e-10 Score=123.35 Aligned_cols=295 Identities=13% Similarity=0.034 Sum_probs=168.4
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecC------------CCCCCCccCceeCC-CCCEEEEEE-C
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLS------------SSSCSPVIDPHLSS-DGTMIAFVR-D 189 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~------------~~~~~~~~~~~~Sp-Dg~~la~~~-~ 189 (776)
..+....|+| .||+.|+.. .++.|.+||+.+++....+. ......+..+.|+| +++.|+... +
T Consensus 44 ~~v~~~~~s~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 44 GGINTLDIEP--VEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp SCEEEEEECT--TTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred CcEEEEEEec--CCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 4788889986 257777765 68899999999887652222 11233478899999 677777776 4
Q ss_pred CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCC---CeEEEEEecCCCCCeEEEeecCCCCCC
Q 004067 190 CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDS---KFIAFTQVDSSEIPRFRIMHQGKSSVG 266 (776)
Q Consensus 190 ~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 266 (776)
+.|.+|++.+++.......... ...+.|+|++ +.|+....+
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~------------------ 165 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEET------------------VYSHHMSPVSTKHCLVAVGTRG------------------ 165 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSC------------------EEEEEECSSCSSCCEEEEEESS------------------
T ss_pred CeEEEeeCCCCccceeccCCCc------------------eeeeEeecCCCCCcEEEEEcCC------------------
Confidence 6799999999887665443321 3356787754 466655432
Q ss_pred CCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeE-EEEEEeecCceEEEEEEE
Q 004067 267 SEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNIL-TAQVLNRSQTKLKVLKFD 345 (776)
Q Consensus 267 ~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~-l~~~~~~~~~~~~l~~~d 345 (776)
..|.+||+.+++....- ..+...+..++|+|+++. ++... .+..|.+||
T Consensus 166 ------------------~~v~~~d~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~ll~~~~----~dg~i~i~d 215 (408)
T 4a11_B 166 ------------------PKVQLCDLKSGSCSHIL--------QGHRQEILAVSWSPRYDYILATAS----ADSRVKLWD 215 (408)
T ss_dssp ------------------SSEEEEESSSSCCCEEE--------CCCCSCEEEEEECSSCTTEEEEEE----TTSCEEEEE
T ss_pred ------------------CeEEEEeCCCcceeeee--------cCCCCcEEEEEECCCCCcEEEEEc----CCCcEEEEE
Confidence 23789999887644331 446678899999999984 55444 344599999
Q ss_pred CCCCce--EEEEEeccCceeecccccccC---CCCccccC-CeEEEEeccCCceEEEEEeCCCceeeccccC------Ce
Q 004067 346 IKTGQR--KVILVEELDSWVNLHDCFTPL---DKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEG------DW 413 (776)
Q Consensus 346 ~~~g~~--~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~------~~ 413 (776)
+.++.. ..+..............+... -..+.+.+ +..+++...+| .|.+|++.+++....... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~ 293 (408)
T 4a11_B 216 VRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN--RMRLWNSSNGENTLVNYGKVCNNSKK 293 (408)
T ss_dssp TTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS--CEEEEETTTCCBCCCCCCCCCCCCSS
T ss_pred CCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC--eEEEEECCCCccceeccccccccccc
Confidence 977652 221100000000000000000 00112322 33555565666 799999887654332211 01
Q ss_pred EEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEE
Q 004067 414 MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRI 492 (776)
Q Consensus 414 ~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i 492 (776)
...... ....+..+++.+.. + .+.+|.+. .+. .+..+..+. .+..+.|+|||+.|+..... ..|
T Consensus 294 ~~~~~~-~~~~~~~~~~~~~~-~--~i~v~d~~---~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i 358 (408)
T 4a11_B 294 GLKFTV-SCGCSSEFVFVPYG-S--TIAVYTVY---SGE----QITMLKGHYKTVDCCVFQSNFQELYSGSRD----CNI 358 (408)
T ss_dssp CCCCEE-CCSSSSCEEEEEET-T--EEEEEETT---TCC----EEEEECCCSSCEEEEEEETTTTEEEEEETT----SCE
T ss_pred cceeEE-ecCCCceEEEEecC-C--EEEEEECc---CCc----ceeeeccCCCeEEEEEEcCCCCEEEEECCC----CeE
Confidence 111111 22223334444433 2 25555543 333 455565444 46788999999988865433 359
Q ss_pred EEEEcCCCceeE
Q 004067 493 LLCSLQDGSLVL 504 (776)
Q Consensus 493 ~~~~~~~~~~~~ 504 (776)
.+|+..+++.+.
T Consensus 359 ~iw~~~~~~~~~ 370 (408)
T 4a11_B 359 LAWVPSLYEPVP 370 (408)
T ss_dssp EEEEECC-----
T ss_pred EEEeCCCCCccC
Confidence 999988776433
No 370
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.33 E-value=2.5e-10 Score=118.87 Aligned_cols=305 Identities=10% Similarity=-0.049 Sum_probs=160.5
Q ss_pred CCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccc----eecCCCCCCCccCceeCC--CCCEEEEEEC-CcEEEEe
Q 004067 125 LGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPE----LKLSSSSCSPVIDPHLSS--DGTMIAFVRD-CELHVLN 196 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~----~~l~~~~~~~~~~~~~Sp--Dg~~la~~~~-~~l~~~~ 196 (776)
..+....|+| ||++|+.. .++.|.+||+.++... ..+.... ..+..+.|+| |++.|+..+. +.|.+|+
T Consensus 12 ~~v~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 12 DLVHDVVYDF---YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHD-SSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp SCEEEEEECS---SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCS-SCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cceeEEEEcC---CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCC-CcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 4788999999 99999877 6788999999876422 1333333 3488899999 6999888875 5799999
Q ss_pred cCCCce-------eEE-eeCCCCCceecCCcccceecccCCcceEEECCC--CCeEEEEEecCCCCCeEEEeecCCCCCC
Q 004067 197 LLINEQ-------RQL-THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD--SKFIAFTQVDSSEIPRFRIMHQGKSSVG 266 (776)
Q Consensus 197 l~~g~~-------~~l-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 266 (776)
+.+++. +.+ +.... ...+..+.|+|+ ++.|+....+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~l~~~~~d------------------ 133 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDS----------------KGSLYSVKFAPAHLGLKLACLGND------------------ 133 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCC----------------SSCEEEEEECCGGGCSEEEEEETT------------------
T ss_pred cCCCcccccccCcceeeeeccc----------------CCceeEEEEcCCCCCcEEEEecCC------------------
Confidence 988742 111 11111 012457889999 9988876633
Q ss_pred CCCcceecCCCCCCCCCeEEEEEEEcCCCceEE-EEcccC---CC-CCCCCcceEEEEEeccC---CeEEEEEEeecCce
Q 004067 267 SEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSW-MDLQCG---GT-DQNYDEEYLARVNWMHG---NILTAQVLNRSQTK 338 (776)
Q Consensus 267 ~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~-l~~~~~---~~-~~~~~~~~~~~~~~SpD---g~~l~~~~~~~~~~ 338 (776)
..|.+||+.+++... +..... .. ....+...+..+.|+|+ ++.++... .+
T Consensus 134 ------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~----~~ 191 (351)
T 3f3f_A 134 ------------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA----LE 191 (351)
T ss_dssp ------------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE----TT
T ss_pred ------------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec----CC
Confidence 357889987765311 110000 00 11245567889999998 77776665 34
Q ss_pred EEEEEEECCCCceEEEEEeccC-ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEE
Q 004067 339 LKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQ 417 (776)
Q Consensus 339 ~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~ 417 (776)
..+..++...+....+..-... ..+ ..-.|+|.+.. ...++++...+| .|.+|++..+..............
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~h~~~i-~~~~~~p~~~~----~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~ 264 (351)
T 3f3f_A 192 QAIIYQRGKDGKLHVAAKLPGHKSLI-RSISWAPSIGR----WYQLIATGCKDG--RIRIFKITEKLSPLASEESLTNSN 264 (351)
T ss_dssp EEEEEEECTTSCEEEEEECCCCCSCE-EEEEECCCSSC----SSEEEEEEETTS--CEEEEEEEECC-------------
T ss_pred CcEEEEccCCCceeeeeecCCCCcce-eEEEECCCCCC----cceEEEEEcCCC--eEEEEeCCCCcCccccCCccccee
Confidence 4566777777776544432211 110 01113331100 014677777777 788888765432222111111111
Q ss_pred EEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeEEEEEcCCcCEEEEEeeCCCCCCEEEEEE
Q 004067 418 IVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCS 496 (776)
Q Consensus 418 ~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~ 496 (776)
....++....+........ ......+. .......+..+..+. .+..+.|+|||+.|+..... ..|.+|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----g~v~iw~ 334 (351)
T 3f3f_A 265 MFDNSADVDMDAQGRSDSN--TEEKAELQ----SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD----GKVRLWK 334 (351)
T ss_dssp ----------------------------C----CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETT----SCEEEEE
T ss_pred ccCCCcccccccccccccc--cceeeeec----ccccccEEEEEecccccEEEEEEcCCCCEEEEecCC----CcEEEEe
Confidence 1112222211111110000 01111110 000001233344333 47788999999977766533 3599999
Q ss_pred cCCCceeEee
Q 004067 497 LQDGSLVLPL 506 (776)
Q Consensus 497 ~~~~~~~~~l 506 (776)
..+++..+.+
T Consensus 335 ~~~~~~~~~~ 344 (351)
T 3f3f_A 335 ATYSNEFKCM 344 (351)
T ss_dssp ECTTSCEEEE
T ss_pred cCcCcchhhe
Confidence 8877654443
No 371
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.30 E-value=2.9e-12 Score=129.55 Aligned_cols=142 Identities=15% Similarity=0.069 Sum_probs=95.2
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCceE-EEEEcCCCCCcccccccccccccCC--CCC-Cccc---hhcCChhh
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQ-CAVSGAPVTSWDGYDTFYTEKYMGL--PSE-DPVG---YEYSSVMH 704 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~---~~~~~~~~ 704 (776)
+..+|++||+|+|+|+||++++.+++.+|++|+ +++++++.......... ....+.. +.. .... ....+++.
T Consensus 5 ~~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 83 (318)
T 2d81_A 5 AFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY-YTSCMYNGYPSITTPTANMKSWSGNQIA 83 (318)
T ss_dssp CCCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC-GGGGSTTCCCCCHHHHHHHHHHBTTTBC
T ss_pred hcCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH-HHHHhhccCCCCCCHHHHHHHhhcccCC
Confidence 345799999999999999999999999999998 87776654321110000 0000110 100 0000 00113334
Q ss_pred hhccCC-CcEEEEecCCCCccChHHHHHHHHHHHHCCC--CeEEEEecCCCCCCCCCCc------------------HHH
Q 004067 705 HVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARK--PYEILIFPDERHMPRRHRD------------------RIY 763 (776)
Q Consensus 705 ~~~~i~-~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~--~~~~~~~~~~~H~~~~~~~------------------~~~ 763 (776)
.+.+++ .|+|++||++|.+||+.+++++++.|++.+. +++++++++++|.+..... ...
T Consensus 84 ~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d 163 (318)
T 2d81_A 84 SVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD 163 (318)
T ss_dssp CGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred hhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCCh
Confidence 444444 5999999999999999999999999988873 6899999999998632211 245
Q ss_pred HHHHHHHHHHH
Q 004067 764 MEERIWEFIER 774 (776)
Q Consensus 764 ~~~~~~~fl~~ 774 (776)
....+++||..
T Consensus 164 ~~~~i~~ff~g 174 (318)
T 2d81_A 164 GAGAALKWIYG 174 (318)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhc
Confidence 66788888854
No 372
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.29 E-value=5.5e-10 Score=117.12 Aligned_cols=112 Identities=14% Similarity=0.051 Sum_probs=74.0
Q ss_pred CCCCEEEEEeCCCC-cCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEE
Q 004067 64 PDDNLITYLLSPDH-SLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKII 142 (776)
Q Consensus 64 pDG~~ia~~~~~~~-~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l 142 (776)
|||++++-...... .....|+++|.++++....... +.+- .+.+|| ||++|
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~------------------------g~~p-~i~~sp---dg~~l 64 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT------------------------AFNG-HVQVSN---DGKKI 64 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC------------------------CEEE-EEEECT---TSSEE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecC------------------------CCCC-ceEECC---CCCEE
Confidence 58887554433211 1235899999998876433321 1123 788999 99999
Q ss_pred EEeC-----------CCcEEEEeCCCCccceecCCCC-----CCCccCceeCCCCCEEEEEEC---CcEEEEecCCCcee
Q 004067 143 MVPL-----------PDGIYFQDLSCSKPELKLSSSS-----CSPVIDPHLSSDGTMIAFVRD---CELHVLNLLINEQR 203 (776)
Q Consensus 143 ~~~~-----------~~~l~~~d~~~~~~~~~l~~~~-----~~~~~~~~~SpDg~~la~~~~---~~l~~~~l~~g~~~ 203 (776)
+... ++.|.+||+.+.+....+.... +.....+.+||||++|+.... +.|.++|+++++..
T Consensus 65 yv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~ 144 (361)
T 2oiz_A 65 YTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV 144 (361)
T ss_dssp EEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE
T ss_pred EEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE
Confidence 9873 3459999999877653333211 123567899999998776642 45999999988654
No 373
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.29 E-value=9e-10 Score=112.19 Aligned_cols=248 Identities=13% Similarity=0.113 Sum_probs=148.4
Q ss_pred eeeEEEeecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCcee
Q 004067 127 VTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQR 203 (776)
Q Consensus 127 ~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~ 203 (776)
...+.|+| ||+.|++. .++.|++||.+++ .+ .+.... .....+.++|||+.++.... +.|+++++++|+.+
T Consensus 30 ~eg~~~d~---~g~~l~~~~~~~~~i~~~~~~~~-~~-~~~~~~-~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 30 TEGPVYVP---ARSAVIFSDVRQNRTWAWSDDGQ-LS-PEMHPS-HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEEEEG---GGTEEEEEEGGGTEEEEEETTSC-EE-EEESSC-SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred ccCCeEeC---CCCEEEEEeCCCCEEEEEECCCC-eE-EEECCC-CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 45789999 99966665 5678999999998 54 444333 23677899999996544433 56999999889877
Q ss_pred EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCC
Q 004067 204 QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNV 283 (776)
Q Consensus 204 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 283 (776)
.+...... . .......++++|||+ |++.....+.... ... + .......
T Consensus 104 ~~~~~~~~-~------------~~~~~~~i~~d~~G~-l~vtd~~~g~~~~----~~~-------------~-~~~~~~~ 151 (296)
T 3e5z_A 104 SIADSFEG-K------------KLNSPNDVCLAPDGS-LWFSDPTYGIDKP----EEG-------------Y-GGEMELP 151 (296)
T ss_dssp EEECEETT-E------------ECCCCCCEEECTTSC-EEEEECSHHHHCG----GGS-------------S-CCCCCSS
T ss_pred EEeeccCC-C------------CCCCCCCEEECCCCC-EEEECCccccccc----ccc-------------c-cccccCC
Confidence 66432111 0 011134788999997 4443210000000 000 0 0000001
Q ss_pred eEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECC-CCce---EEEEEecc
Q 004067 284 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQR---KVILVEEL 359 (776)
Q Consensus 284 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~-~g~~---~~l~~~~~ 359 (776)
...|+.++.+ ++...+. ........++|+|||+.+ +.. . ....|++|+++ +|.. ..+. ...
T Consensus 152 ~~~l~~~~~~-g~~~~~~---------~~~~~~~gi~~s~dg~~l-v~~-~--~~~~i~~~~~~~~g~~~~~~~~~-~~~ 216 (296)
T 3e5z_A 152 GRWVFRLAPD-GTLSAPI---------RDRVKPNGLAFLPSGNLL-VSD-T--GDNATHRYCLNARGETEYQGVHF-TVE 216 (296)
T ss_dssp SCEEEEECTT-SCEEEEE---------CCCSSEEEEEECTTSCEE-EEE-T--TTTEEEEEEECSSSCEEEEEEEE-CCS
T ss_pred CcEEEEECCC-CCEEEee---------cCCCCCccEEECCCCCEE-EEe-C--CCCeEEEEEECCCCcCcCCCeEe-eCC
Confidence 1467888877 6655542 223345679999999977 443 2 23468899986 5655 2232 111
Q ss_pred CceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEee-cCCCcEEEEEEccCCCc
Q 004067 360 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGV-NEASGQVYFTGTLDGPL 438 (776)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~-s~dg~~i~~~~~~~~~~ 438 (776)
. ..+.++..++++-+|++. ++ .|++|+++|.....+..... +.... | ++|++.||+.+..
T Consensus 217 ~----------~~p~~i~~d~~G~l~v~~-~~--~v~~~~~~g~~~~~~~~~~~-~~~~~-f~~~d~~~L~v~t~~---- 277 (296)
T 3e5z_A 217 P----------GKTDGLRVDAGGLIWASA-GD--GVHVLTPDGDELGRVLTPQT-TSNLC-FGGPEGRTLYMTVST---- 277 (296)
T ss_dssp S----------SCCCSEEEBTTSCEEEEE-TT--EEEEECTTSCEEEEEECSSC-CCEEE-EESTTSCEEEEEETT----
T ss_pred C----------CCCCeEEECCCCCEEEEc-CC--eEEEECCCCCEEEEEECCCC-ceeEE-EECCCCCEEEEEcCC----
Confidence 1 111233445555455555 44 79999999877777766554 44444 6 6899988888652
Q ss_pred eeeEEEEEeC
Q 004067 439 ESHLYCAKLY 448 (776)
Q Consensus 439 ~~~l~~~~~~ 448 (776)
.||++++.
T Consensus 278 --~l~~~~~~ 285 (296)
T 3e5z_A 278 --EFWSIETN 285 (296)
T ss_dssp --EEEEEECS
T ss_pred --eEEEEEcc
Confidence 69999983
No 374
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.29 E-value=1.3e-08 Score=106.73 Aligned_cols=289 Identities=11% Similarity=-0.021 Sum_probs=157.3
Q ss_pred eEcCCCCEEEEEeCCCCcCcc-eEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCc
Q 004067 61 GFSPDDNLITYLLSPDHSLSR-KVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKK 139 (776)
Q Consensus 61 ~~SpDG~~ia~~~~~~~~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg 139 (776)
..+|||++ +|+.+..+.... .|+++|+++++....... +.+- .+.+|| ||
T Consensus 27 ~~~~~~~~-~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~------------------------g~~p-~i~~sp---Dg 77 (373)
T 2mad_H 27 APGADGRR-SYINLPAHHSAIIQQWVLDAGSGSILGHVNG------------------------GFLP-NPVAAH---SG 77 (373)
T ss_pred cCCCCCCE-EEEeCCcccCCccEEEEEECCCCeEEEEecC------------------------CCCC-CeEECC---CC
Confidence 34689976 566653111111 789999998876433211 1122 788999 99
Q ss_pred eEEEEeC-----------CCcEEEEeCCCCccceecCCC-C-----CCCccCceeCCCCCEEEEEEC---CcEEEEecCC
Q 004067 140 KIIMVPL-----------PDGIYFQDLSCSKPELKLSSS-S-----CSPVIDPHLSSDGTMIAFVRD---CELHVLNLLI 199 (776)
Q Consensus 140 ~~l~~~~-----------~~~l~~~d~~~~~~~~~l~~~-~-----~~~~~~~~~SpDg~~la~~~~---~~l~~~~l~~ 199 (776)
++|++.. ++.|.++|..+.+....+... . ......+.|||||++|++... +.|.++| ++
T Consensus 78 ~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 78 SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence 9999984 356889999887665233221 0 112457899999999888753 4699999 98
Q ss_pred CceeEE-eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCC
Q 004067 200 NEQRQL-THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 278 (776)
Q Consensus 200 g~~~~l-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (776)
++.... ..-+. .+...|+++..++.....
T Consensus 157 ~~~~~~~i~~~~---------------------~~~~~~~~~~~~~~~~~d----------------------------- 186 (373)
T 2mad_H 157 GSSDDQLLSSPT---------------------CYHIHPGAPSTFYLLCAQ----------------------------- 186 (373)
T ss_pred CCEEeEEcCCCc---------------------eEEEEeCCCceEEEEcCC-----------------------------
Confidence 876543 32221 122456665544322111
Q ss_pred CCCCCeEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEe
Q 004067 279 GASNVKVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 357 (776)
Q Consensus 279 g~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 357 (776)
..+.++|. +++.. .+... +...........+.+++++..+++.+. ...++.+|+.++..+.+..-
T Consensus 187 ------g~~~~vd~-~g~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 187 ------GGLAKTDH-AGGAAGAGLVG---AMLTAAQNLLTQPAQANKSGRIVWPVY----SGKILQADISAAGATNKAPI 252 (373)
T ss_pred ------CCEEEEEC-CCcEEEEEecc---ccccCCcceeecceeEecCCEEEEEcC----CceEEEEeccCCcceEeeee
Confidence 12345555 44433 11100 000011112334678888776666652 33699999987654433211
Q ss_pred ccCceeecccccccCCCC---ccccCCeEEEEecc-------CCceEEEEEeCCCcee-eccccCCeEEEEEEeecCCCc
Q 004067 358 ELDSWVNLHDCFTPLDKG---VTKYSGGFIWASEK-------TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASG 426 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~-------~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~dg~ 426 (776)
....-......|.|.+.. ++.+++.+|....+ .+...|+++|+.+++. +.|..+. ....+ .|++||+
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i-~~s~Dg~ 330 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAI-SVAQDGG 330 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeE-EECCCCC
Confidence 000000000112232211 23344455554432 1235899999988765 5665443 22344 4999999
Q ss_pred EEEEEEccCCCceeeEEEEEeC
Q 004067 427 QVYFTGTLDGPLESHLYCAKLY 448 (776)
Q Consensus 427 ~i~~~~~~~~~~~~~l~~~~~~ 448 (776)
.++|..+... ..|..+++.
T Consensus 331 ~~l~v~~~~~---~~V~ViD~~ 349 (373)
T 2mad_H 331 PDLYALSAGT---EVLHIYDAG 349 (373)
T ss_pred eEEEEEcCCC---CeEEEEECC
Confidence 6666665422 357777763
No 375
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.28 E-value=7.5e-11 Score=136.83 Aligned_cols=247 Identities=11% Similarity=0.047 Sum_probs=155.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|||||++|+..+.+ ..|.+|++.++..+.+..... +...+....|+|
T Consensus 12 V~~l~~s~dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~---------------------h~~~V~~l~~s~-- 63 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTG---------------------HEGPVWRVDWAH-- 63 (753)
T ss_dssp EEEECCCSSSCCEEEEETT-----TEEEEEEEETTEEEEEEEECC---------------------CSSCEEEEEECC--
T ss_pred eEEEEECCCCCeEEEEECC-----CcEEEEecCCCCCccceeccC---------------------CcCceEEEEecC--
Confidence 4788999999999866542 469999998654433322111 124688999998
Q ss_pred CC--ceEEEEe-CCCcEEEEeCCCCcc--ceecCCCCCCCccCceeCCC--CCEEEEEEC-CcEEEEecCCCcee-EEee
Q 004067 137 SK--KKIIMVP-LPDGIYFQDLSCSKP--ELKLSSSSCSPVIDPHLSSD--GTMIAFVRD-CELHVLNLLINEQR-QLTH 207 (776)
Q Consensus 137 ~d--g~~l~~~-~~~~l~~~d~~~~~~--~~~l~~~~~~~~~~~~~SpD--g~~la~~~~-~~l~~~~l~~g~~~-~lt~ 207 (776)
+ |+.|+.. .++.|++||+.+++. ...+.... ..+..+.|+|+ |+.++.... +.|.+|++.++... ....
T Consensus 64 -~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~ 141 (753)
T 3jro_A 64 -PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS-ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 141 (753)
T ss_dssp -TTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE
T ss_pred -CCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC-CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe
Confidence 8 8888876 788999999999862 21333333 35888999999 999988876 57999999887322 1111
Q ss_pred CCCCCceecCCcccceecccCCcceEEECC-------------CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 208 GANGNTVTHGLAEYIAQEEMDRKTGYWWSL-------------DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-------------Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
.+.. ..+..+.|+| ||+.|+....+
T Consensus 142 ~~~~----------------~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d-------------------------- 179 (753)
T 3jro_A 142 DAHA----------------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-------------------------- 179 (753)
T ss_dssp ECCS----------------SCEEEEEECCCC---------CGGGCCEEEEETT--------------------------
T ss_pred ecCC----------------CceEEEEecCcccccccccccCCCCCEEEEEECC--------------------------
Confidence 1110 1145788999 58877776643
Q ss_pred CCCCCCCCCeEEEEEEEcCCCceE--EEEcccCCCCCCCCcceEEEEEeccC---CeEEEEEEeecCceEEEEEEECCCC
Q 004067 275 YPFAGASNVKVRLGVVSAAGGPVS--WMDLQCGGTDQNYDEEYLARVNWMHG---NILTAQVLNRSQTKLKVLKFDIKTG 349 (776)
Q Consensus 275 ~~~~g~~~~~~~l~~~d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~SpD---g~~l~~~~~~~~~~~~l~~~d~~~g 349 (776)
..|++||+.++... .+.. ...+...+..++|+|| |+.++... .+..|.+||+.++
T Consensus 180 ----------g~I~iwd~~~~~~~~~~~~~------~~~h~~~V~~l~~sp~~~~~~~l~s~s----~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 180 ----------NLVKIWKYNSDAQTYVLEST------LEGHSDWVRDVAWSPTVLLRSYLASVS----QDRTCIIWTQDNE 239 (753)
T ss_dssp ----------SCEEEEEEETTTTEEEEEEE------ECCCSSCEEEEEECCCCSSSEEEEEEE----SSSCEEEEEESSS
T ss_pred ----------CeEEEEeccCCcccceeeee------ecCCCCcEEEEEeccCCCCCCEEEEEe----cCCEEEEecCCCC
Confidence 23788888766421 1111 1456678999999999 88777665 3446899999876
Q ss_pred ceEEEEEeccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCc
Q 004067 350 QRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGT 403 (776)
Q Consensus 350 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~ 403 (776)
........... . . .......+.+++ +.++++...+| .|++|+.+.+
T Consensus 240 ~~~~~~~~~~~-~-~----~~~~v~~l~~spdg~~l~s~s~Dg--~I~vwd~~~~ 286 (753)
T 3jro_A 240 QGPWKKTLLKE-E-K----FPDVLWRASWSLSGNVLALSGGDN--KVTLWKENLE 286 (753)
T ss_dssp SSCCBCCBSSS-S-C----CSSCCCCEEECTTTCCEEEECSSS--CEECCBCCSS
T ss_pred CCcceeEEecc-C-C----CCCceEEEEEcCCCCEEEEEcCCC--EEEEEecCCC
Confidence 43211110000 0 0 000001112322 33566666677 7888887743
No 376
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=99.28 E-value=3.2e-12 Score=136.45 Aligned_cols=163 Identities=12% Similarity=0.020 Sum_probs=108.8
Q ss_pred CceEEEEEcCCCCcccccccccccchh-hhHHHHh-CCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHH
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 630 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~ 630 (776)
..|+||++||..++.. ..| .. ++..|.+ .||.|+++|+||+|.+.......... ...+|+.+.++++.
T Consensus 69 ~~~~vvllHG~~~s~~--~~w----~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~----~~~~dl~~~i~~l~ 138 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGE--NSW----LSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIR----VVGAEVAYLVQVLS 138 (432)
T ss_dssp TSEEEEEECCTTCCTT--SHH----HHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCCC--chH----HHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHH----HHHHHHHHHHHHHH
Confidence 4689999999776541 122 22 4556665 79999999999998775321111111 12567888888887
Q ss_pred HcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCCCcccccccccccccCCCCCCccchhcCChhhhhccCC
Q 004067 631 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK 710 (776)
Q Consensus 631 ~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 710 (776)
++..++.+++.++||||||++|+.++.++|++++++++++|...+... .+. ....+ ....
T Consensus 139 ~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~----------~~~-----~~~l~-----~~da 198 (432)
T 1gpl_A 139 TSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQD----------TPE-----EVRLD-----PSDA 198 (432)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTT----------CCT-----TTSCC-----GGGS
T ss_pred HhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccC----------CCh-----hhccC-----cCCC
Confidence 654456789999999999999999999999989999988876432100 000 00001 1233
Q ss_pred CcEEEEecCCCCccCh---HHHHHHHHHHHHCCCCeEEEEecCCCCCC
Q 004067 711 GKLLLVHGMIDENVHF---RHTARLINALVAARKPYEILIFPDERHMP 755 (776)
Q Consensus 711 ~P~lii~G~~D~~v~~---~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 755 (776)
.++.+||+..|.++|. ... + .-.++..||++||..
T Consensus 199 ~~V~vIHt~~d~lVP~~~~g~~----~------~lg~~dfypngg~~q 236 (432)
T 1gpl_A 199 KFVDVIHTDISPILPSLGFGMS----Q------KVGHMDFFPNGGKDM 236 (432)
T ss_dssp SEEEEECSCCSCHHHHCCCBCS----S------CCSSEEEEEGGGSSC
T ss_pred ceEEEEEcCCcccccccccccc----c------cccceEEccCCCCCC
Confidence 5899999999998876 211 1 113466789999953
No 377
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.26 E-value=6.2e-10 Score=116.12 Aligned_cols=202 Identities=10% Similarity=0.040 Sum_probs=132.3
Q ss_pred eeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCc
Q 004067 60 IGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKK 139 (776)
Q Consensus 60 ~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg 139 (776)
..+++|++.|+..+. ...|++||+.+++......... ..+.... .. -++-+. |+
T Consensus 42 ~~~~~d~~~l~sg~~-----Dg~v~iwd~~~~~~~~~~~~~~--v~~~~~~--------------~~--~~s~s~---D~ 95 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCE-----DGALHFTQLKDSKTITTITTPN--PRTGGEH--------------PA--IISRGP---CN 95 (343)
T ss_dssp SSSSEEEEEEEEEEE-----TTEEEEEEESSSSCEEEEEEEC--CCTTCCC--------------CS--EEEECS---TT
T ss_pred hhhcCCCCEEEEECC-----CCcEEEEECCCCcEEEEEecCC--ceeeeeC--------------Cc--eEEecC---CC
Confidence 346789998885544 3479999999887533221100 0000000 00 233445 77
Q ss_pred eEEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCC--CCCEEEEEEC-CcEEEEecCCCceeEEeeCCCCCceec
Q 004067 140 KIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSS--DGTMIAFVRD-CELHVLNLLINEQRQLTHGANGNTVTH 216 (776)
Q Consensus 140 ~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~Sp--Dg~~la~~~~-~~l~~~~l~~g~~~~lt~~~~~~~~~~ 216 (776)
...++..++.+.++|+.+++....+.......+..+.|+| +|+.++..+. +.|.+||+.+++..++......
T Consensus 96 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~----- 170 (343)
T 3lrv_A 96 RLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD----- 170 (343)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS-----
T ss_pred eEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC-----
Confidence 7777777777777788787733233322233478899999 9999987774 5899999999987554422211
Q ss_pred CCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCc
Q 004067 217 GLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 296 (776)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 296 (776)
..+..++|+|||+.|+....+ ..|.+||+.+++
T Consensus 171 -----------~~i~~~~~~pdg~~lasg~~d------------------------------------g~i~iwd~~~~~ 203 (343)
T 3lrv_A 171 -----------VEYSSGVLHKDSLLLALYSPD------------------------------------GILDVYNLSSPD 203 (343)
T ss_dssp -----------CCCCEEEECTTSCEEEEECTT------------------------------------SCEEEEESSCTT
T ss_pred -----------CceEEEEECCCCCEEEEEcCC------------------------------------CEEEEEECCCCC
Confidence 014578999999988765533 347999999887
Q ss_pred eEEEEcccCCCCCCC-CcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCce
Q 004067 297 VSWMDLQCGGTDQNY-DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 351 (776)
Q Consensus 297 ~~~l~~~~~~~~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~ 351 (776)
.....+ .. +...+..++|+|||+.|+..+ .. .|.+||+.++..
T Consensus 204 ~~~~~~-------~~~h~~~v~~l~fs~~g~~l~s~~----~~-~v~iwd~~~~~~ 247 (343)
T 3lrv_A 204 QASSRF-------PVDEEAKIKEVKFADNGYWMVVEC----DQ-TVVCFDLRKDVG 247 (343)
T ss_dssp SCCEEC-------CCCTTSCEEEEEECTTSSEEEEEE----SS-BEEEEETTSSTT
T ss_pred CCccEE-------eccCCCCEEEEEEeCCCCEEEEEe----CC-eEEEEEcCCCCc
Confidence 652222 23 677899999999999887776 12 699999988754
No 378
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.26 E-value=8.6e-10 Score=112.33 Aligned_cols=234 Identities=10% Similarity=0.040 Sum_probs=143.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+.+|.|+|||+.|+|+.... ..|++++++++ .+.+... ...+..+.++|
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~----~~i~~~~~~~~-~~~~~~~------------------------~~~~~~l~~~~-- 78 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQ----NRTWAWSDDGQ-LSPEMHP------------------------SHHQNGHCLNK-- 78 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGG----TEEEEEETTSC-EEEEESS------------------------CSSEEEEEECT--
T ss_pred ccCCeEeCCCCEEEEEeCCC----CEEEEEECCCC-eEEEECC------------------------CCCcceeeECC--
Confidence 47899999999888887644 46999999988 6555531 13467889999
Q ss_pred CCceEEEEeC-CCcEEEEeCCCCccceecCCC----CCCCccCceeCCCCCEEEEEE------------------CCcEE
Q 004067 137 SKKKIIMVPL-PDGIYFQDLSCSKPELKLSSS----SCSPVIDPHLSSDGTMIAFVR------------------DCELH 193 (776)
Q Consensus 137 ~dg~~l~~~~-~~~l~~~d~~~~~~~~~l~~~----~~~~~~~~~~SpDg~~la~~~------------------~~~l~ 193 (776)
||+.++... ++.|+++|..+++.+ .+... .......+.++|||+.++... .+.||
T Consensus 79 -dg~l~v~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~ 156 (296)
T 3e5z_A 79 -QGHLIACSHGLRRLERQREPGGEWE-SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVF 156 (296)
T ss_dssp -TCCEEEEETTTTEEEEECSTTCCEE-EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEE
T ss_pred -CCcEEEEecCCCeEEEEcCCCCcEE-EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEE
Confidence 999766654 468999999877766 44221 111245689999998444211 23689
Q ss_pred EEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCccee
Q 004067 194 VLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 273 (776)
Q Consensus 194 ~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (776)
.++.+ |+.+.+..... ...+++|+|||+.| +.....
T Consensus 157 ~~~~~-g~~~~~~~~~~------------------~~~gi~~s~dg~~l-v~~~~~------------------------ 192 (296)
T 3e5z_A 157 RLAPD-GTLSAPIRDRV------------------KPNGLAFLPSGNLL-VSDTGD------------------------ 192 (296)
T ss_dssp EECTT-SCEEEEECCCS------------------SEEEEEECTTSCEE-EEETTT------------------------
T ss_pred EECCC-CCEEEeecCCC------------------CCccEEECCCCCEE-EEeCCC------------------------
Confidence 98887 66655533211 13478899999988 543211
Q ss_pred cCCCCCCCCCeEEEEEEEcC-CCce---EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCC
Q 004067 274 AYPFAGASNVKVRLGVVSAA-GGPV---SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG 349 (776)
Q Consensus 274 ~~~~~g~~~~~~~l~~~d~~-~~~~---~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g 349 (776)
..|++|+++ +|+. ..+- . ........+++++||++++ .. ...|++||+++.
T Consensus 193 -----------~~i~~~~~~~~g~~~~~~~~~-~-------~~~~~p~~i~~d~~G~l~v-~~-----~~~v~~~~~~g~ 247 (296)
T 3e5z_A 193 -----------NATHRYCLNARGETEYQGVHF-T-------VEPGKTDGLRVDAGGLIWA-SA-----GDGVHVLTPDGD 247 (296)
T ss_dssp -----------TEEEEEEECSSSCEEEEEEEE-C-------CSSSCCCSEEEBTTSCEEE-EE-----TTEEEEECTTSC
T ss_pred -----------CeEEEEEECCCCcCcCCCeEe-e-------CCCCCCCeEEECCCCCEEE-Ec-----CCeEEEECCCCC
Confidence 247788876 4554 2221 1 0122334589999998433 32 235999999854
Q ss_pred ceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee
Q 004067 350 QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG 406 (776)
Q Consensus 350 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~ 406 (776)
....+...... ....|. ..+++.+|++..+ .||++++.++..+
T Consensus 248 ~~~~~~~~~~~----~~~~f~-------~~d~~~L~v~t~~---~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 248 ELGRVLTPQTT----SNLCFG-------GPEGRTLYMTVST---EFWSIETNVRGLE 290 (296)
T ss_dssp EEEEEECSSCC----CEEEEE-------STTSCEEEEEETT---EEEEEECSCCBCC
T ss_pred EEEEEECCCCc----eeEEEE-------CCCCCEEEEEcCC---eEEEEEccccccc
Confidence 44444322211 111121 0133455655544 6999998776543
No 379
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.24 E-value=2.7e-09 Score=110.73 Aligned_cols=208 Identities=13% Similarity=0.084 Sum_probs=129.7
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..++|+|||+ |++..... ..|+++|+++++.+.+.... ...+..+.|+|
T Consensus 47 ~~~~~~~~~g~-l~~~~~~~----~~i~~~d~~~~~~~~~~~~~-----------------------~~~~~~i~~~~-- 96 (333)
T 2dg1_A 47 LEGLNFDRQGQ-LFLLDVFE----GNIFKINPETKEIKRPFVSH-----------------------KANPAAIKIHK-- 96 (333)
T ss_dssp EEEEEECTTSC-EEEEETTT----CEEEEECTTTCCEEEEEECS-----------------------SSSEEEEEECT--
T ss_pred ccCcEECCCCC-EEEEECCC----CEEEEEeCCCCcEEEEeeCC-----------------------CCCcceEEECC--
Confidence 47899999998 65554433 46999999999887765211 13577889999
Q ss_pred CCceEEEEeCC-----CcEEEEeCCCCccceecCC-CCCCCccCceeCCCCCEEEEEEC-------CcEEEEecCCCcee
Q 004067 137 SKKKIIMVPLP-----DGIYFQDLSCSKPELKLSS-SSCSPVIDPHLSSDGTMIAFVRD-------CELHVLNLLINEQR 203 (776)
Q Consensus 137 ~dg~~l~~~~~-----~~l~~~d~~~~~~~~~l~~-~~~~~~~~~~~SpDg~~la~~~~-------~~l~~~~l~~g~~~ 203 (776)
||+.++.... ..|+++|.++++.+..+.. .....+..+.++|||+.++-... ..||.++.++++.+
T Consensus 97 -dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 97 -DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp -TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred -CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 9986666544 4799999999877522221 12223567899999975443332 36999998887776
Q ss_pred EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCC
Q 004067 204 QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNV 283 (776)
Q Consensus 204 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 283 (776)
.+..... ....++|+|||+.|++.....
T Consensus 176 ~~~~~~~------------------~~~~i~~~~dg~~l~v~~~~~---------------------------------- 203 (333)
T 2dg1_A 176 PIIQNIS------------------VANGIALSTDEKVLWVTETTA---------------------------------- 203 (333)
T ss_dssp EEEEEES------------------SEEEEEECTTSSEEEEEEGGG----------------------------------
T ss_pred EeecCCC------------------cccceEECCCCCEEEEEeCCC----------------------------------
Confidence 6643211 134688999999887654221
Q ss_pred eEEEEEEEcCC-C-ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEE
Q 004067 284 KVRLGVVSAAG-G-PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 354 (776)
Q Consensus 284 ~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l 354 (776)
..|++||+++ + ....+..... .. .........+.+++||++++... ....|++||+++...+.+
T Consensus 204 -~~i~~~d~~~~g~~~~~~~~~~~-~~-~~~~~~~~~i~~d~~G~l~v~~~----~~~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 204 -NRLHRIALEDDGVTIQPFGATIP-YY-FTGHEGPDSCCIDSDDNLYVAMY----GQGRVLVFNKRGYPIGQI 269 (333)
T ss_dssp -TEEEEEEECTTSSSEEEEEEEEE-EE-CCSSSEEEEEEEBTTCCEEEEEE----TTTEEEEECTTSCEEEEE
T ss_pred -CeEEEEEecCCCcCcccccceEE-Ee-cCCCCCCCceEECCCCCEEEEEc----CCCEEEEECCCCCEEEEE
Confidence 2467788753 2 2222110000 00 11123567799999998443322 234689999865444444
No 380
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.24 E-value=1.1e-09 Score=114.76 Aligned_cols=270 Identities=8% Similarity=0.005 Sum_probs=162.9
Q ss_pred cCCeeeEEEeecCCCceEEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC--cEEEEecCCCc
Q 004067 124 GLGVTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC--ELHVLNLLINE 201 (776)
Q Consensus 124 ~~~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~--~l~~~~l~~g~ 201 (776)
...+....|+| ||+.|+...+..+.+||+++++.. ...... .+....++++++.++++... .|.+||+.+++
T Consensus 19 ~~~V~~v~fs~---dg~~la~g~~~~~~iw~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 19 SNPVTDYEFNQ---DQSCLILSTLKSFEIYNVHPVAHI-MSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp CCCCCEEEECT---TSSEEEEECSSEEEEEEETTEEEE-EEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred CCceEEEEECC---CCCEEEEEcCCEEEEEecCCccee-eeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 35788999999 999999988888889999887665 222212 25668899999999887654 69999999887
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
.......... +..+.|++++ ++... +
T Consensus 93 ~~~~~~~~~~------------------v~~v~~~~~~--~~~~~-~--------------------------------- 118 (355)
T 3vu4_A 93 DVSRIKVDAP------------------VKDLFLSREF--IVVSY-G--------------------------------- 118 (355)
T ss_dssp EEEEEECSSC------------------EEEEEECSSE--EEEEE-T---------------------------------
T ss_pred EEEEEECCCc------------------eEEEEEcCCE--EEEEE-c---------------------------------
Confidence 6443222211 4467788764 33222 1
Q ss_pred CCeEEEEEEEcCCC-ce-EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCc---------
Q 004067 282 NVKVRLGVVSAAGG-PV-SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ--------- 350 (776)
Q Consensus 282 ~~~~~l~~~d~~~~-~~-~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~--------- 350 (776)
..+++||+.++ +. ..+. . .....++++ +.+++.+. ..+..|.+||+.++.
T Consensus 119 ---~~i~i~d~~~~~~~~~~~~----------~--~~~~~~~s~--~~la~~sg--~~~g~v~iwd~~~~~~~~~~~~~~ 179 (355)
T 3vu4_A 119 ---DVISVFKFGNPWKRITDDI----------R--FGGVCEFSN--GLLVYSNE--FNLGQIHITKLQSSGSATTQDQGV 179 (355)
T ss_dssp ---TEEEEEESSTTCCBSSCCE----------E--EEEEEEEET--TEEEEEES--SCTTCEEEEECCC-----------
T ss_pred ---CEEEEEECCCCceeeEEec----------c--CCceEEEEc--cEEEEeCC--CcCcEEEEEECCCCCccccccccc
Confidence 24789999876 32 1111 1 233456677 45555422 234569999998865
Q ss_pred --------eEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceE-EEEEeCCCce-eecccc--CCeEEEEE
Q 004067 351 --------RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRH-LYLHDINGTC-LGPITE--GDWMVEQI 418 (776)
Q Consensus 351 --------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~-l~~~~~~g~~-~~~lt~--~~~~~~~~ 418 (776)
.+.+..+....... .|+| ++.++++...+| . |.+||+.+++ ...+.. +...+..+
T Consensus 180 ~~~~~~p~~~~~~~h~~~v~~~---~~s~--------~g~~l~s~s~d~--~~v~iwd~~~~~~~~~~~~g~h~~~v~~~ 246 (355)
T 3vu4_A 180 QQKAILGKGVLIKAHTNPIKMV---RLNR--------KSDMVATCSQDG--TIIRVFKTEDGVLVREFRRGLDRADVVDM 246 (355)
T ss_dssp -------CCEEECCCSSCEEEE---EECT--------TSSEEEEEETTC--SEEEEEETTTCCEEEEEECTTCCSCEEEE
T ss_pred cccccCcccEEEEccCCceEEE---EECC--------CCCEEEEEeCCC--CEEEEEECCCCcEEEEEEcCCCCCcEEEE
Confidence 33343333332211 1333 334666666666 6 9999987654 455652 45556665
Q ss_pred EeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceee--------------------cCCC--CeEEEEEcCCc
Q 004067 419 VGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL--------------------TNGK--GKHVAVLDHNM 476 (776)
Q Consensus 419 ~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l--------------------~~~~--~~~~~~~spdg 476 (776)
. |+|||++|+..+. ++ .+++|.+.. .... ....+ .... ....++|++||
T Consensus 247 ~-~s~~~~~l~s~s~-d~--~v~iw~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~ 317 (355)
T 3vu4_A 247 K-WSTDGSKLAVVSD-KW--TLHVFEIFN--DQDN---KRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISES 317 (355)
T ss_dssp E-ECTTSCEEEEEET-TC--EEEEEESSC--CSCC---CSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSS
T ss_pred E-ECCCCCEEEEEEC-CC--EEEEEEccC--CCCc---ccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCC
Confidence 4 9999997655544 33 378887753 1110 11111 1110 12457999999
Q ss_pred CEEEEEeeCCCCCCEEEEEEcC
Q 004067 477 RNFVDFHDSLDSPPRILLCSLQ 498 (776)
Q Consensus 477 ~~l~~~~~~~~~~~~i~~~~~~ 498 (776)
+.|+..... +.+.+++..
T Consensus 318 ~~l~~~~~d----g~~~~~~~~ 335 (355)
T 3vu4_A 318 SLVVVWPHT----RMIETFKVV 335 (355)
T ss_dssp EEEEEETTT----TEEEEEEEE
T ss_pred CEEEEEeCC----CeEEEEEEE
Confidence 988887642 356666543
No 381
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.24 E-value=3e-09 Score=109.91 Aligned_cols=244 Identities=10% Similarity=0.006 Sum_probs=149.4
Q ss_pred eeEEEeecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCceeEE
Q 004067 128 TRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINEQRQL 205 (776)
Q Consensus 128 ~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~~~~l 205 (776)
..+.|+| |++.+++. ..+.|+++|.++++.+ .+... . .+..+.|+|||+.++. ....|+++++++|+.+.+
T Consensus 52 egp~~~~---~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~-~-~v~~i~~~~dg~l~v~-~~~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 52 EGPTFDP---ASGTAWWFNILERELHELHLASGRKT-VHALP-F-MGSALAKISDSKQLIA-SDDGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEET---TTTEEEEEEGGGTEEEEEETTTTEEE-EEECS-S-CEEEEEEEETTEEEEE-ETTEEEEEETTTCCEEEE
T ss_pred cCCeEeC---CCCEEEEEECCCCEEEEEECCCCcEE-EEECC-C-cceEEEEeCCCeEEEE-ECCCEEEEECCCCcEEEE
Confidence 4678999 98888876 4678999999998776 44432 2 3677899999986665 466799999999988777
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
...... .. ..+...+.++|||+ |++....... .....
T Consensus 125 ~~~~~~------~~-------~~~~~~i~~d~~G~-l~v~~~~~~~-----------------------------~~~~~ 161 (326)
T 2ghs_A 125 AELESD------LP-------GNRSNDGRMHPSGA-LWIGTMGRKA-----------------------------ETGAG 161 (326)
T ss_dssp ECSSTT------CT-------TEEEEEEEECTTSC-EEEEEEETTC-----------------------------CTTCE
T ss_pred eeCCCC------CC-------CCCCCCEEECCCCC-EEEEeCCCcC-----------------------------CCCce
Confidence 543211 00 01134688999998 5544422110 00125
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECC--CC-ce---EEEEEecc
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK--TG-QR---KVILVEEL 359 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~--~g-~~---~~l~~~~~ 359 (776)
.|+.++ +++...+.. .......++|||||+.+++... ....|+++|++ +| .. +.+..-..
T Consensus 162 ~l~~~~--~g~~~~~~~---------~~~~~~~i~~s~dg~~lyv~~~---~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~ 227 (326)
T 2ghs_A 162 SIYHVA--KGKVTKLFA---------DISIPNSICFSPDGTTGYFVDT---KVNRLMRVPLDARTGLPTGKAEVFIDSTG 227 (326)
T ss_dssp EEEEEE--TTEEEEEEE---------EESSEEEEEECTTSCEEEEEET---TTCEEEEEEBCTTTCCBSSCCEEEEECTT
T ss_pred EEEEEe--CCcEEEeeC---------CCcccCCeEEcCCCCEEEEEEC---CCCEEEEEEcccccCCcccCceEEEECCC
Confidence 688888 566555421 1123457899999997776542 23469999986 66 42 22222111
Q ss_pred CceeecccccccCCCCccccCCeEEEEecc-CCceEEEEEeCCCceeeccccCCeEEEEEEeec-CCCcEEEEEEccCC-
Q 004067 360 DSWVNLHDCFTPLDKGVTKYSGGFIWASEK-TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVN-EASGQVYFTGTLDG- 436 (776)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s-~dg~~i~~~~~~~~- 436 (776)
..+. | .++..+.++.+|++.. .+ .|+++++++.....+......+..+. |+ +|++.||+++...+
T Consensus 228 ~~~~-------p--~gi~~d~~G~lwva~~~~~--~v~~~d~~g~~~~~i~~~~~~~~~~a-f~g~d~~~L~vt~~~~~~ 295 (326)
T 2ghs_A 228 IKGG-------M--DGSVCDAEGHIWNARWGEG--AVDRYDTDGNHIARYEVPGKQTTCPA-FIGPDASRLLVTSAREHL 295 (326)
T ss_dssp SSSE-------E--EEEEECTTSCEEEEEETTT--EEEEECTTCCEEEEEECSCSBEEEEE-EESTTSCEEEEEEBCTTC
T ss_pred CCCC-------C--CeeEECCCCCEEEEEeCCC--EEEEECCCCCEEEEEECCCCCcEEEE-EecCCCCEEEEEecCCCC
Confidence 1111 1 1223344444555543 34 79999997766666665544455554 77 89898888876543
Q ss_pred --------CceeeEEEEEe
Q 004067 437 --------PLESHLYCAKL 447 (776)
Q Consensus 437 --------~~~~~l~~~~~ 447 (776)
|..-.||++++
T Consensus 296 ~~~~~~~~p~~g~~~~~~~ 314 (326)
T 2ghs_A 296 DDDAITANPQHGLTFELGI 314 (326)
T ss_dssp CHHHHHHCTTTTCEEECSS
T ss_pred ChhHhccCCCCceEEEEeC
Confidence 22235777765
No 382
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=99.24 E-value=8.7e-11 Score=119.93 Aligned_cols=209 Identities=13% Similarity=0.004 Sum_probs=122.5
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccC
Q 004067 536 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 615 (776)
Q Consensus 536 ~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~ 615 (776)
.+...++.|.... ....+.||++||..++... .|.. .++..|.++||.|+++|+||+|.+...
T Consensus 15 ~l~~~i~~p~~~~--~~~~~~VvllHG~~~~~~~--~~~~---~l~~~L~~~G~~v~~~d~~g~g~~~~~---------- 77 (317)
T 1tca_A 15 VLDAGLTCQGASP--SSVSKPILLVPGTGTTGPQ--SFDS---NWIPLSTQLGYTPCWISPPPFMLNDTQ---------- 77 (317)
T ss_dssp HHHHTEEETTBCT--TSCSSEEEEECCTTCCHHH--HHTT---THHHHHHTTTCEEEEECCTTTTCSCHH----------
T ss_pred HHhheeeCCCCCC--CCCCCeEEEECCCCCCcch--hhHH---HHHHHHHhCCCEEEEECCCCCCCCcHH----------
Confidence 3455566665431 1234678999997665431 1220 457888999999999999998754321
Q ss_pred CccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCC---CceEEEEEcCCCCCcccccccccccccCCCCC
Q 004067 616 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSE 692 (776)
Q Consensus 616 ~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (776)
...+++.+.++.+.++. ..+++.++||||||.++.+++..++ +.++++|+++|............. + .. .
T Consensus 78 -~~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~-~-~~--~ 150 (317)
T 1tca_A 78 -VNTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDA-L-AV--S 150 (317)
T ss_dssp -HHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHH-T-TC--B
T ss_pred -HHHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhh-h-hh--c
Confidence 01456777788877654 3468999999999999999888765 789999998876442211110000 0 00 0
Q ss_pred Cccc--hhcCCh-hhhhc-----cCCCcEEEEecCCCCccChHH--HHHHHHHHHHCCCCeEEEEe-------cCCCCCC
Q 004067 693 DPVG--YEYSSV-MHHVH-----KMKGKLLLVHGMIDENVHFRH--TARLINALVAARKPYEILIF-------PDERHMP 755 (776)
Q Consensus 693 ~~~~--~~~~~~-~~~~~-----~i~~P~lii~G~~D~~v~~~~--~~~~~~~l~~~~~~~~~~~~-------~~~~H~~ 755 (776)
.... ....+. +..+. ....|+++++|..|.++++.. .......+. + ...+.. ++.+|..
T Consensus 151 ~~~~~~~~~~s~f~~~L~~~~~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~--~--a~~~~~~~~~~~~~~~gH~~ 226 (317)
T 1tca_A 151 APSVWQQTTGSALTTALRNAGGLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLF--N--GKNVQAQAVCGPLFVIDHAG 226 (317)
T ss_dssp CHHHHHTBTTCHHHHHHHHTTTTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCB--T--SEEEEHHHHHCTTCCCCTTH
T ss_pred CchHHhhCcCcHHHHHHHhcCCCCCCCCEEEEEeCCCCeECCccccccchhhhcc--C--CccEEeeeccCCCCccCccc
Confidence 0000 000000 01111 235799999999999998765 111111111 1 122222 4789964
Q ss_pred CCCCcHHHHHHHHHHHHHH
Q 004067 756 RRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 756 ~~~~~~~~~~~~~~~fl~~ 774 (776)
...+ ...+..+.+||+.
T Consensus 227 -~l~~-p~~~~~v~~~L~~ 243 (317)
T 1tca_A 227 -SLTS-QFSYVVGRSALRS 243 (317)
T ss_dssp -HHHB-HHHHHHHHHHHHC
T ss_pred -ccCC-HHHHHHHHHHhcC
Confidence 2223 3456788888864
No 383
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.23 E-value=2.3e-10 Score=117.86 Aligned_cols=245 Identities=9% Similarity=0.015 Sum_probs=149.0
Q ss_pred cCCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccc--eecCCCCCCCccCceeCC--CCCEEEEEEC-CcEEEEec
Q 004067 124 GLGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPE--LKLSSSSCSPVIDPHLSS--DGTMIAFVRD-CELHVLNL 197 (776)
Q Consensus 124 ~~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~Sp--Dg~~la~~~~-~~l~~~~l 197 (776)
...+....|+| ||++|+.. .++.|.+||+.++... ..+..+.. .+..++|+| +|+.|+..+. +.|.+|++
T Consensus 13 ~~~V~~v~~s~---~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~-~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 13 EDMIHDAQMDY---YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEG-PVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -CCEEEEEECG---GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSS-CEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cCeEEEeeEcC---CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCc-cEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 35788999999 99999876 6788999999877532 13444433 478899986 4888887764 57999999
Q ss_pred CCCceeEE-eeCCCCCceecCCcccceecccCCcceEEECCC--CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceec
Q 004067 198 LINEQRQL-THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD--SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 274 (776)
Q Consensus 198 ~~g~~~~l-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (776)
.+++...+ +..+.. ..+..++|+|| |+.|+..+.+
T Consensus 89 ~~~~~~~~~~~~~h~----------------~~V~~v~~~p~~~g~~lasgs~D-------------------------- 126 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHD----------------SSVNSVCWAPHDYGLILACGSSD-------------------------- 126 (316)
T ss_dssp SSSCCCEEEEECCCS----------------SCCCEEEECCTTTCSCEEEECSS--------------------------
T ss_pred CCCcceEEEEccCCC----------------CceEEEEECCCCCCcEEEEEcCC--------------------------
Confidence 98753322 221110 11568899998 7777765533
Q ss_pred CCCCCCCCCeEEEEEEEcCCCceEE-EEcccCCCCCCCCcceEEEEEeccCC-----------------eEEEEEEeecC
Q 004067 275 YPFAGASNVKVRLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGN-----------------ILTAQVLNRSQ 336 (776)
Q Consensus 275 ~~~~g~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~SpDg-----------------~~l~~~~~~~~ 336 (776)
..|.+||+.++.... ... ...+...+..++|+|++ +.++..+
T Consensus 127 ----------~~i~lwd~~~~~~~~~~~~------~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs---- 186 (316)
T 3bg1_A 127 ----------GAISLLTYTGEGQWEVKKI------NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGG---- 186 (316)
T ss_dssp ----------SCEEEEEECSSSCEEECCB------TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCB----
T ss_pred ----------CCEEEEecCCCCCcceeee------eccccCCcceEEEccccCCccccccccccCccccceEEEec----
Confidence 236888887663221 111 13445567778999983 4444332
Q ss_pred ceEEEEEEECCCCc-eEEEE---EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCc---e--eec
Q 004067 337 TKLKVLKFDIKTGQ-RKVIL---VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGT---C--LGP 407 (776)
Q Consensus 337 ~~~~l~~~d~~~g~-~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~---~--~~~ 407 (776)
.+..|.+||++++. .+.+. .+....+. -.|+|... .++.++++...+| .|.+|++++. . ...
T Consensus 187 ~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~---v~~sp~~~----~~~~~las~s~D~--~v~iw~~~~~~~~~~~~~~ 257 (316)
T 3bg1_A 187 CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD---VAWAPSIG----LPTSTIASCSQDG--RVFIWTCDDASSNTWSPKL 257 (316)
T ss_dssp TTSBCCEEEECTTSCEEEEECCBCCSSCEEE---EECCCCSS----CSCCEEEEEETTC--EEEEEECSSTTCCCCBCCE
T ss_pred CCCeEEEEEeCCCCccceeeecccCCCceEE---EEecCCCC----CCCceEEEEcCCC--eEEEEEccCccccchhhhh
Confidence 34568889987542 22222 22222111 12333210 0124666666777 8888987652 1 123
Q ss_pred cccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 408 ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 408 lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
+..+...+..+ .|+|+|+.|+..+ .++. +.||..+.
T Consensus 258 ~~~~~~~v~~v-~~sp~g~~las~~-~D~~--v~lw~~~~ 293 (316)
T 3bg1_A 258 LHKFNDVVWHV-SWSITANILAVSG-GDNK--VTLWKESV 293 (316)
T ss_dssp EEECSSCEEEE-EECTTTCCEEEEE-SSSC--EEEEEECT
T ss_pred hhcCCCcEEEE-EEcCCCCEEEEEc-CCCe--EEEEEECC
Confidence 33334455555 4999999765554 4433 88998875
No 384
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.23 E-value=1.1e-09 Score=118.22 Aligned_cols=196 Identities=13% Similarity=0.150 Sum_probs=125.7
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCC----------Cc-eEEeecCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKT----------CK-QELVFSPPDGGLDENNISPEEKLRRERLRERG 124 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~----------~~-~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 124 (776)
.+..++|+|++..+.+....+ ..|++|++.. .+ ...+..+ .
T Consensus 130 ~v~~l~~~p~~~~~lat~~~d----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h------------------------~ 181 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPS----SDVLVFDYTKHPSKPEPSGECQPDLRLRGH------------------------Q 181 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSS----SCEEEEEGGGSCSSCCTTCCCCCSEEEECC------------------------S
T ss_pred cEEEEEECCCCCcEEEEECCC----CcEEEEECCCcccccCccccCCCcEEecCC------------------------C
Confidence 368999999854444444433 3699999975 22 2233322 2
Q ss_pred CCeeeEEEeecCCCce-EEEEe-CCCcEEEEeCCCCcc-------ceecCCCCCCCccCceeCC-CCCEEEEEE-CCcEE
Q 004067 125 LGVTRYEWVKTSSKKK-IIMVP-LPDGIYFQDLSCSKP-------ELKLSSSSCSPVIDPHLSS-DGTMIAFVR-DCELH 193 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~-~l~~~-~~~~l~~~d~~~~~~-------~~~l~~~~~~~~~~~~~Sp-Dg~~la~~~-~~~l~ 193 (776)
..+..+.|+| +++ .|+.. .++.|.+||+.++.. ...+.... ..+..+.|+| ++..++... ++.|+
T Consensus 182 ~~v~~l~~~~---~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~l~s~~~dg~i~ 257 (430)
T 2xyi_A 182 KEGYGLSWNP---NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT-AVVEDVAWHLLHESLFGSVADDQKLM 257 (430)
T ss_dssp SCCCCEEECT---TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCS-SCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred CCeEEEEeCC---CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCC-CCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence 3578899999 998 66665 678999999987432 11232332 3478899999 555555554 46799
Q ss_pred EEecCCCc---eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCc
Q 004067 194 VLNLLINE---QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQ 270 (776)
Q Consensus 194 ~~~l~~g~---~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (776)
+|++.++. ......... ..+..+.|+|+++.++......
T Consensus 258 i~d~~~~~~~~~~~~~~~~~-----------------~~v~~i~~~p~~~~~l~tg~~d--------------------- 299 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHTVDAHT-----------------AEVNCLSFNPYSEFILATGSAD--------------------- 299 (430)
T ss_dssp EEETTCSCSSSCSEEEECCS-----------------SCEEEEEECSSCTTEEEEEETT---------------------
T ss_pred EEECCCCCCCcceeEeecCC-----------------CCeEEEEeCCCCCCEEEEEeCC---------------------
Confidence 99998763 221111111 1155789999999755544321
Q ss_pred ceecCCCCCCCCCeEEEEEEEcCCCc--eEEEEcccCCCCCCCCcceEEEEEeccCCeE-EEEEEeecCceEEEEEEECC
Q 004067 271 EDHAYPFAGASNVKVRLGVVSAAGGP--VSWMDLQCGGTDQNYDEEYLARVNWMHGNIL-TAQVLNRSQTKLKVLKFDIK 347 (776)
Q Consensus 271 ~~~~~~~~g~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~-l~~~~~~~~~~~~l~~~d~~ 347 (776)
..|.+||+.+.. ...+ ..+...+..+.|+|+|+. ++... .+..|.+||+.
T Consensus 300 --------------g~v~vwd~~~~~~~~~~~---------~~h~~~v~~i~~sp~~~~~l~s~~----~d~~i~iwd~~ 352 (430)
T 2xyi_A 300 --------------KTVALWDLRNLKLKLHSF---------ESHKDEIFQVQWSPHNETILASSG----TDRRLHVWDLS 352 (430)
T ss_dssp --------------SEEEEEETTCTTSCSEEE---------ECCSSCEEEEEECSSCTTEEEEEE----TTSCCEEEEGG
T ss_pred --------------CeEEEEeCCCCCCCeEEe---------ecCCCCEEEEEECCCCCCEEEEEe----CCCcEEEEeCC
Confidence 358999998743 3333 345678999999999974 44443 23458999987
Q ss_pred C
Q 004067 348 T 348 (776)
Q Consensus 348 ~ 348 (776)
.
T Consensus 353 ~ 353 (430)
T 2xyi_A 353 K 353 (430)
T ss_dssp G
T ss_pred C
Confidence 6
No 385
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.23 E-value=5.3e-09 Score=110.21 Aligned_cols=290 Identities=13% Similarity=0.129 Sum_probs=163.6
Q ss_pred CceEEEEeCC------CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE-----------CCcEEEEecCCC
Q 004067 138 KKKIIMVPLP------DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR-----------DCELHVLNLLIN 200 (776)
Q Consensus 138 dg~~l~~~~~------~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~-----------~~~l~~~~l~~g 200 (776)
|++++++... +.|.++|+.+.+....+..+.. . .+.+||||++|+... .+.|.++|..++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~--P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL--P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS--C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC--C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 8888887733 5899999999988745544432 3 799999999876664 245999999998
Q ss_pred cee-EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCC
Q 004067 201 EQR-QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAG 279 (776)
Q Consensus 201 ~~~-~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (776)
+.. .+...+.. ....+ .....+.+||||++|+......
T Consensus 160 ~vv~~I~v~g~~-r~~~g----------~~P~~~~~spDGk~lyV~n~~~------------------------------ 198 (426)
T 3c75_H 160 LPIADIELPDAP-RFLVG----------TYQWMNALTPDNKNLLFYQFSP------------------------------ 198 (426)
T ss_dssp CEEEEEEETTCC-CCCBS----------CCGGGSEECTTSSEEEEEECSS------------------------------
T ss_pred cEEEEEECCCcc-ccccC----------CCcceEEEcCCCCEEEEEecCC------------------------------
Confidence 764 34332110 00000 0023678999999887654211
Q ss_pred CCCCeEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec
Q 004067 280 ASNVKVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE 358 (776)
Q Consensus 280 ~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 358 (776)
...|.++|+++++.. .+..+ .. ....|+|+..++..+. +..+..++..+++......
T Consensus 199 ----~~~VsVID~~t~kvv~~I~v~--------g~-----~~~~p~g~~~~v~~~~---dG~~~~V~~~~~~v~~~~~-- 256 (426)
T 3c75_H 199 ----APAVGVVDLEGKTFDRMLDVP--------DC-----YHIFPASPTVFYMNCR---DGSLARVDFADGETKVTNT-- 256 (426)
T ss_dssp ----SCEEEEEETTTTEEEEEEECC--------SE-----EEEEEEETTEEEEEET---TSSEEEEECCTTCCEEEEC--
T ss_pred ----CCeEEEEECCCCeEEEEEEcC--------Cc-----eeeccCCCcEEEEEcC---CCCEEEEECCCCcEEEEee--
Confidence 145889999998764 44331 11 1223333322222111 1123333444443322110
Q ss_pred cCceeec-ccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeecccc----------CCeEEE--EEEeecCCC
Q 004067 359 LDSWVNL-HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITE----------GDWMVE--QIVGVNEAS 425 (776)
Q Consensus 359 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~----------~~~~~~--~~~~~s~dg 425 (776)
..+... .+.+.. ..+..++++++|.+. .| .++++|..++....+.. ..+... ....+++||
T Consensus 257 -~~~~v~~~p~~~~--~~~~~dg~~~~~~s~-~g--~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg 330 (426)
T 3c75_H 257 -EVFHTEDELLINH--PAFSLRSGRLVWPTY-TG--KIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS 330 (426)
T ss_dssp -CCCSCTTSCBCSC--CEECTTTCEEEEEBT-TS--EEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG
T ss_pred -eeeccCCCceeeE--eeecCCCCEEEEEeC-CC--cEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC
Confidence 101000 000000 001334566777664 45 89999987664332211 011111 123589999
Q ss_pred cEEEEEEccCCC-----ceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCC
Q 004067 426 GQVYFTGTLDGP-----LESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 500 (776)
Q Consensus 426 ~~i~~~~~~~~~-----~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~ 500 (776)
+++|+....... ....++.+|+.+ .+ .+.++.-+.....+.|+|||+.++|+..... ..|.++|..++
T Consensus 331 ~rlyVa~~~~~~gthk~~s~~VsVID~~T-~k----vv~~I~vg~~P~gia~spDg~~~lyv~n~~s--~~VsVID~~t~ 403 (426)
T 3c75_H 331 DRIYLLVDQRDEWKHKAASRFVVVLNAET-GE----RINKIELGHEIDSINVSQDAEPLLYALSAGT--QTLHIYDAATG 403 (426)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTT-CC----EEEEEEEEEEECEEEECCSSSCEEEEEETTT--TEEEEEETTTC
T ss_pred CEEEEEecccccccccCCCCEEEEEECCC-Ce----EEEEEECCCCcCeEEEccCCCEEEEEEcCCC--CeEEEEECCCC
Confidence 999988542110 125799999842 22 4566655445678899999995666655322 47999999999
Q ss_pred ceeEee
Q 004067 501 SLVLPL 506 (776)
Q Consensus 501 ~~~~~l 506 (776)
+.++.+
T Consensus 404 kvv~tI 409 (426)
T 3c75_H 404 EELRSV 409 (426)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 877765
No 386
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=5e-09 Score=108.28 Aligned_cols=306 Identities=12% Similarity=0.077 Sum_probs=168.7
Q ss_pred EcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceE
Q 004067 62 FSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKI 141 (776)
Q Consensus 62 ~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~ 141 (776)
..|||++++-...........|+++|.++++....... +.+.. +.+|| ||++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v------------------------G~~P~-va~sp---DG~~ 91 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG------------------------GFLPN-PVVAD---DGSF 91 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE------------------------CSSCE-EEECT---TSSC
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC------------------------CCCCc-EEECC---CCCE
Confidence 48999988655442111135899999999886433321 12233 88999 9999
Q ss_pred EEEeC-----------CCcEEEEeCCCCccceecCCCC------CCCccCceeCCCCCEEEEEEC---CcEEEEecCCCc
Q 004067 142 IMVPL-----------PDGIYFQDLSCSKPELKLSSSS------CSPVIDPHLSSDGTMIAFVRD---CELHVLNLLINE 201 (776)
Q Consensus 142 l~~~~-----------~~~l~~~d~~~~~~~~~l~~~~------~~~~~~~~~SpDg~~la~~~~---~~l~~~~l~~g~ 201 (776)
+++.. .+.|.++|..+.+....+.-.. +.....+.+||||+++..... +.|.++|+++++
T Consensus 92 lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 92 IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred EEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc
Confidence 98873 3569999999988763443221 113567899999998766642 469999999998
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
...-...+....... . +...-++.++||+.+++.....+.. .
T Consensus 172 vv~tI~v~g~~~~~P--------~--g~~~~~~~~~DG~~~~v~~~~~g~v-~--------------------------- 213 (386)
T 3sjl_D 172 FKRMLDVPDCYHIFP--------T--APDTFFMHCRDGSLAKVAFGTEGTP-E--------------------------- 213 (386)
T ss_dssp EEEEEECCSEEEEEE--------E--ETTEEEEEETTSCEEEEECCSSSCC-E---------------------------
T ss_pred EEEEEECCCcceeec--------C--CCceeEEECCCCCEEEEECCCCCeE-E---------------------------
Confidence 654333222100000 0 0011235778887544432211211 0
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEec-cCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec--
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-- 358 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-- 358 (776)
+..+ ..+. ........++.|. +||+.+ |.+. ...++.+|+.++..+.+..-.
T Consensus 214 ---------~~~~---~~~~--------~~~~~~~~~~~~~~~dG~~~-~vs~----~g~V~v~d~~~~~~~v~~~~~~~ 268 (386)
T 3sjl_D 214 ---------ITHT---EVFH--------PEDEFLINHPAYSQKAGRLV-WPTY----TGKIHQIDLSSGDAKFLPAVEAL 268 (386)
T ss_dssp ---------EEEC---CCCS--------CTTSCBCSCCEEETTTTEEE-EEBT----TSEEEEEECTTSSCEECCCEESS
T ss_pred ---------Eeec---ceec--------cccccccccceeEcCCCcEE-EEeC----CCEEEEEECCCCcceeecceecc
Confidence 0000 0000 0011111124664 789644 4443 246999999877654432111
Q ss_pred -----cCceeecccccccCCCC---ccccCCeEEEEecc-------CCceEEEEEeCCCcee-eccccCCeEEEEEEeec
Q 004067 359 -----LDSWVNLHDCFTPLDKG---VTKYSGGFIWASEK-------TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVN 422 (776)
Q Consensus 359 -----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~-------~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s 422 (776)
...|. |.+.. +..+++.+|..... +...+|+++|+.+++. +++.-+. ...++ .+|
T Consensus 269 ~~~~~~~g~~-------p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~l-avs 339 (386)
T 3sjl_D 269 TEAERADGWR-------PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSI-NVS 339 (386)
T ss_dssp CHHHHHTTEE-------ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEE-EEC
T ss_pred cccccccccc-------CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceE-EEC
Confidence 12333 22211 12233445444322 2346999999987763 4454332 33344 499
Q ss_pred CCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCC
Q 004067 423 EASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHN 475 (776)
Q Consensus 423 ~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spd 475 (776)
+||+..+|.++..+ ..+..+++. .++ .+..+........+.+|+|
T Consensus 340 ~D~~~~ly~tn~~~---~~VsViD~~-t~k----~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 340 QDEKPLLYALSTGD---KTLYIHDAE-SGE----ELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp SSSSCEEEEEETTT---TEEEEEETT-TCC----EEEEECCCCSSCCEEEECC
T ss_pred CCCCeEEEEEcCCC---CeEEEEECC-CCc----EEEEecCCCCCceeEECCc
Confidence 99985555554432 356777764 343 5666666555567788887
No 387
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.20 E-value=8.8e-09 Score=104.82 Aligned_cols=239 Identities=13% Similarity=0.069 Sum_probs=143.3
Q ss_pred eeEEEeecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCceeEE
Q 004067 128 TRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINEQRQL 205 (776)
Q Consensus 128 ~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~~~~l 205 (776)
..+.|+| +++.|++. ..+.|+++|.++++.+ .+... ..+..+.++|||+ |+....+.|+++++++++.+.+
T Consensus 16 Egp~w~~---~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~--~~~~~i~~~~dG~-l~v~~~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 16 ESPVWEE---VSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMD--APVSSVALRQSGG-YVATIGTKFCALNWKEQSAVVL 88 (297)
T ss_dssp EEEEEET---TTTEEEEEETTTTEEEEEETTTCCEE-EEECS--SCEEEEEEBTTSS-EEEEETTEEEEEETTTTEEEEE
T ss_pred cCCeEEC---CCCEEEEEECCCCEEEEEECCCCcEE-EEeCC--CceEEEEECCCCC-EEEEECCeEEEEECCCCcEEEE
Confidence 3688999 98888887 5678999999988775 44332 2467889999999 4445577899999999988777
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
........ ..+...++++|||+ |++......... ........
T Consensus 89 ~~~~~~~~-------------~~~~~di~~d~dG~-l~~~~~~~~~~~------------------------~~~~~~~~ 130 (297)
T 3g4e_A 89 ATVDNDKK-------------NNRFNDGKVDPAGR-YFAGTMAEETAP------------------------AVLERHQG 130 (297)
T ss_dssp EECCTTCS-------------SEEEEEEEECTTSC-EEEEEEECCSBT------------------------TBCCTTCE
T ss_pred EecCCCCC-------------CCCCCCEEECCCCC-EEEecCCccccc------------------------ccccCCCc
Confidence 54321100 01134678999998 555543211000 00001225
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEEC--CCCceE--EEEEeccCc
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI--KTGQRK--VILVEELDS 361 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~--~~g~~~--~l~~~~~~~ 361 (776)
.|+.++.++ +...+.. .......++|||||+.+++.... ...|+++|. ++|... .+.......
T Consensus 131 ~l~~~d~~g-~~~~~~~---------~~~~pngi~~spdg~~lyv~~~~---~~~i~~~~~d~~~G~~~~~~~~~~~~~~ 197 (297)
T 3g4e_A 131 ALYSLFPDH-HVKKYFD---------QVDISNGLDWSLDHKIFYYIDSL---SYSVDAFDYDLQTGQISNRRSVYKLEKE 197 (297)
T ss_dssp EEEEECTTS-CEEEEEE---------EESBEEEEEECTTSCEEEEEEGG---GTEEEEEEECTTTCCEEEEEEEEECCGG
T ss_pred EEEEEECCC-CEEEEee---------ccccccceEEcCCCCEEEEecCC---CCcEEEEeccCCCCcccCcEEEEECCCC
Confidence 678888764 4333311 12234579999999977666432 235777775 567642 222111000
Q ss_pred eeecccccccCCCCccccCCeEEEEecc-CCceEEEEEeCCCc-eeeccccCCeEEEEEEeec-CCCcEEEEEEccC
Q 004067 362 WVNLHDCFTPLDKGVTKYSGGFIWASEK-TGFRHLYLHDINGT-CLGPITEGDWMVEQIVGVN-EASGQVYFTGTLD 435 (776)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~g~~~l~~~~~~g~-~~~~lt~~~~~~~~~~~~s-~dg~~i~~~~~~~ 435 (776)
- ..+.++..+.++-+|++.. ++ .|++++++++ ....+......+.... |+ +|++.||+++...
T Consensus 198 ~--------~~p~g~~~d~~G~lwva~~~~~--~v~~~d~~tG~~~~~i~~p~~~~t~~~-f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 198 E--------QIPDGMCIDAEGKLWVACYNGG--RVIRLDPVTGKRLQTVKLPVDKTTSCC-FGGKNYSEMYVTCARD 263 (297)
T ss_dssp G--------CEEEEEEEBTTSCEEEEEETTT--EEEEECTTTCCEEEEEECSSSBEEEEE-EESGGGCEEEEEEBCT
T ss_pred C--------CCCCeeEECCCCCEEEEEcCCC--EEEEEcCCCceEEEEEECCCCCceEEE-EeCCCCCEEEEEcCCc
Confidence 0 0111233444444555543 44 7999999854 4455554444455554 87 8999999998754
No 388
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.20 E-value=2.8e-09 Score=108.98 Aligned_cols=253 Identities=13% Similarity=0.154 Sum_probs=146.8
Q ss_pred eeeEEEeecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCcee
Q 004067 127 VTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQR 203 (776)
Q Consensus 127 ~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~ 203 (776)
...+.|+| ||+.|++. .++.|++|+..+ +.. .+.... .....+.++|||+.++.... +.|++++.+ |+.+
T Consensus 47 ~egp~~~~---~g~~l~~~d~~~~~i~~~~~~g-~~~-~~~~~~-~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 47 SEGPAWWE---AQRTLVWSDLVGRRVLGWREDG-TVD-VLLDAT-AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp EEEEEEEG---GGTEEEEEETTTTEEEEEETTS-CEE-EEEESC-SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccCCeEeC---CCCEEEEEECCCCEEEEEeCCC-CEE-EEeCCC-CccceeeECCCCCEEEEECCCCEEEEECCC-CCEE
Confidence 45789999 99988877 567899999854 444 343322 23677899999995544433 469999987 6666
Q ss_pred EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCC
Q 004067 204 QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNV 283 (776)
Q Consensus 204 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 283 (776)
.+...... .. ......++++|||+ |++....-+.... ..+. .......
T Consensus 120 ~~~~~~~~-~~------------~~~~~~i~~d~dG~-l~~td~~~g~~~~----~~~~--------------~~~~~~~ 167 (305)
T 3dr2_A 120 LLVGRYAG-KR------------LNSPNDLIVARDGA-IWFTDPPFGLRKP----SQGC--------------PADPELA 167 (305)
T ss_dssp EEECEETT-EE------------CSCCCCEEECTTSC-EEEECCSGGGSCG----GGSC--------------CCCCSSS
T ss_pred EEEeccCC-Cc------------cCCCCCEEECCCCC-EEEeCcCCCcccc----cccc--------------ccccccC
Confidence 65432111 00 11134688999997 5543100000000 0000 0000112
Q ss_pred eEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeec--CceEEEEEEECCCCceEEEEEeccCc
Q 004067 284 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS--QTKLKVLKFDIKTGQRKVILVEELDS 361 (776)
Q Consensus 284 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~~~~ 361 (776)
...|+.+|.++++...+. . ......++|||||+.|++..... .....|++++++++.. .....
T Consensus 168 ~~~v~~~d~~~g~~~~~~-~---------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l---~~~~~-- 232 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA-D---------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL---HDRRH-- 232 (305)
T ss_dssp CEEEEEECSSSCCCEEEE-E---------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE---EEEEE--
T ss_pred CCeEEEEcCCCCcEEEEe-c---------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc---cCCeE--
Confidence 357899999888877663 2 12345689999999777664321 0124699999876542 11110
Q ss_pred eeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceee
Q 004067 362 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 441 (776)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~ 441 (776)
+... ... .+.++..+.++-+|++..+ .|++++++|.....+.... .+.+. .|+++++.||+++.. .
T Consensus 233 ~~~~-~~~--~pdgi~~d~~G~lwv~~~~---gv~~~~~~g~~~~~~~~~~-~~~~~-~f~~d~~~L~it~~~------~ 298 (305)
T 3dr2_A 233 FASV-PDG--LPDGFCVDRGGWLWSSSGT---GVCVFDSDGQLLGHIPTPG-TASNC-TFDQAQQRLFITGGP------C 298 (305)
T ss_dssp EECC-SSS--CCCSEEECTTSCEEECCSS---EEEEECTTSCEEEEEECSS-CCCEE-EECTTSCEEEEEETT------E
T ss_pred EEEC-CCC--CCCeEEECCCCCEEEecCC---cEEEECCCCCEEEEEECCC-ceeEE-EEeCCCCEEEEEcCC------e
Confidence 1000 001 1123344444556666633 5999999888777776554 23444 488999988888753 5
Q ss_pred EEEEEe
Q 004067 442 LYCAKL 447 (776)
Q Consensus 442 l~~~~~ 447 (776)
||++++
T Consensus 299 l~~~~~ 304 (305)
T 3dr2_A 299 LWMLPL 304 (305)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 777764
No 389
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.19 E-value=2.2e-08 Score=104.86 Aligned_cols=290 Identities=13% Similarity=0.112 Sum_probs=159.2
Q ss_pred CceEEEEe-------CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-----------CcEEEEecCC
Q 004067 138 KKKIIMVP-------LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-----------CELHVLNLLI 199 (776)
Q Consensus 138 dg~~l~~~-------~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-----------~~l~~~~l~~ 199 (776)
|++++++. .++.|++||.++++....+..+. . . .+.|||||++++.... +.|.++|+++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~-~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAF-N-G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCE-E-E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCC-C-C-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 88887775 24689999999888763443332 2 3 7899999998877642 3499999998
Q ss_pred CceeE-EeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCC
Q 004067 200 NEQRQ-LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 278 (776)
Q Consensus 200 g~~~~-lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (776)
++... +...+.. ...+ .....+++||||++|+......
T Consensus 91 ~~~~~~i~~~~~~--~~~g----------~~p~~i~~spdg~~l~v~n~~~----------------------------- 129 (361)
T 2oiz_A 91 LTFEKEISLPPKR--VQGL----------NYDGLFRQTTDGKFIVLQNASP----------------------------- 129 (361)
T ss_dssp CCEEEEEEECTTB--CCBC----------CCGGGEEECTTSSEEEEEEESS-----------------------------
T ss_pred CcEEEEEEcCccc--cccC----------CCcceEEECCCCCEEEEECCCC-----------------------------
Confidence 76543 3322110 0000 0134688999999887654321
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC-CceEEEEEe
Q 004067 279 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-GQRKVILVE 357 (776)
Q Consensus 279 g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~ 357 (776)
...|.+||+++++....-++ ... ...+.+.|+++..++....+ ..+..++.+. |+......
T Consensus 130 -----~~~v~v~d~~~~~~~~~~i~------~~~---~~~v~~~p~~~~~~~~~~~d---g~~~~v~~~~~g~~~~~~~- 191 (361)
T 2oiz_A 130 -----ATSIGIVDVAKGDYVEDVTA------AAG---CWSVIPQPNRPRSFMTICGD---GGLLTINLGEDGKVASQSR- 191 (361)
T ss_dssp -----SEEEEEEETTTTEEEEEEGG------GTT---EEEEEECTTSSSEEEEEETT---SSEEEEEECTTSSEEEEEE-
T ss_pred -----CCeEEEEECCCCcEEEEEec------CCC---cceeEEcCCCCeeEEEECCC---CcEEEEEECCCCcEeeecc-
Confidence 14688999998865432022 111 11234566653222222211 1233444432 44331111
Q ss_pred ccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccc-----c-----CCeEEEE--EEeecCCC
Q 004067 358 ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT-----E-----GDWMVEQ--IVGVNEAS 425 (776)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt-----~-----~~~~~~~--~~~~s~dg 425 (776)
....|.... .|..-..+.+++.+++.+ .++ .++.+|+.++....+. . ..+.... ...+++|+
T Consensus 192 ~~~~~~~~~---~~~~~~~~~~g~~~~~~~-~~~--~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg 265 (361)
T 2oiz_A 192 SKQMFSVKD---DPIFIAPALDKDKAHFVS-YYG--NVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS 265 (361)
T ss_dssp CCCCSCTTT---SCBCSCCEECSSEEEEEB-TTS--EEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT
T ss_pred ccceEcCCC---CceEEEecccCCEEEEEe-CCC--eEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC
Confidence 001111000 011001123344566655 345 7999998765422111 0 0111111 23589999
Q ss_pred cEEEEEEccCC------CceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCC
Q 004067 426 GQVYFTGTLDG------PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 499 (776)
Q Consensus 426 ~~i~~~~~~~~------~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~ 499 (776)
+++|+....++ .....++.+++.+ ++ .+..+..+. ...+.|||||++|+ +.+. ..|.++|..+
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~----~v~~i~~~~-p~~ia~spdg~~l~-v~n~----~~v~v~D~~t 334 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQ----RVARIPGRD-ALSMTIDQQRNLML-TLDG----GNVNVYDISQ 334 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTT-TE----EEEEEECTT-CCEEEEETTTTEEE-EECS----SCEEEEECSS
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCC-Cc----EEEEEecCC-eeEEEECCCCCEEE-EeCC----CeEEEEECCC
Confidence 99888754111 0124788888742 32 556676666 77899999999655 4432 5799999999
Q ss_pred C--ceeEee
Q 004067 500 G--SLVLPL 506 (776)
Q Consensus 500 ~--~~~~~l 506 (776)
+ +.+..+
T Consensus 335 ~~l~~~~~i 343 (361)
T 2oiz_A 335 PEPKLLRTI 343 (361)
T ss_dssp SSCEEEEEE
T ss_pred CcceeeEEe
Confidence 8 765554
No 390
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=99.18 E-value=1.7e-10 Score=115.50 Aligned_cols=105 Identities=18% Similarity=0.103 Sum_probs=67.7
Q ss_pred eEEEEEcCCCCcccccccccccchhhhHHHHhC--CcEEEEECCCCCCCCchhhhhhhhhccCCccHH-HHHHHHHHHHH
Q 004067 555 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAE-DQLTGAEWLIK 631 (776)
Q Consensus 555 p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~-D~~~~i~~l~~ 631 (776)
+.||++||..++..-.. .|..++..|++. |+.|+++|+ |+|.+...... .. ..+. ++...++.+..
T Consensus 6 ~pvVllHG~~~~~~~~~----~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~-~~-----~~~~~~~~~~~~~l~~ 74 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPL----SMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENS-FF-----LNVNSQVTTVCQILAK 74 (279)
T ss_dssp CCEEEECCTTCCSCCTT----TTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHH-HH-----SCHHHHHHHHHHHHHS
T ss_pred CcEEEECCCCCCCCCcc----cHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccc-cc-----cCHHHHHHHHHHHHHh
Confidence 34889999765431001 345567778765 889999997 88865421111 00 1133 33334444433
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCc-eEEEEEcCC
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDV-FQCAVSGAP 671 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~-~~~~v~~~~ 671 (776)
.... .+++.++||||||.++..++.++|+. ++..|+.++
T Consensus 75 ~~~l-~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 75 DPKL-QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp CGGG-TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred hhhc-cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 2211 26899999999999999999999984 888887664
No 391
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.15 E-value=1.4e-08 Score=104.91 Aligned_cols=199 Identities=10% Similarity=0.045 Sum_probs=127.9
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+.+|.|+||++.++|+.... ..|+++++++++.+.+.. ...+..+.|+|
T Consensus 51 ~egp~~~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~-------------------------~~~v~~i~~~~-- 99 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILE----RELHELHLASGRKTVHAL-------------------------PFMGSALAKIS-- 99 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGG----TEEEEEETTTTEEEEEEC-------------------------SSCEEEEEEEE--
T ss_pred CcCCeEeCCCCEEEEEECCC----CEEEEEECCCCcEEEEEC-------------------------CCcceEEEEeC--
Confidence 36899999999999986543 479999999988765542 13577888999
Q ss_pred CCceEEEEeCCCcEEEEeCCCCccceecCCCCC----CCccCceeCCCCCEEEEEEC-------CcEEEEecCCCceeEE
Q 004067 137 SKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSC----SPVIDPHLSSDGTMIAFVRD-------CELHVLNLLINEQRQL 205 (776)
Q Consensus 137 ~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~----~~~~~~~~SpDg~~la~~~~-------~~l~~~~l~~g~~~~l 205 (776)
||+.++.. ...|+++|.++++.+ .+..... .....+.++|||+.++-... ..||.++ +|+.+.+
T Consensus 100 -dg~l~v~~-~~gl~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 100 -DSKQLIAS-DDGLFLRDTATGVLT-LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp -TTEEEEEE-TTEEEEEETTTCCEE-EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred -CCeEEEEE-CCCEEEEECCCCcEE-EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 99977766 456999999988876 4433211 12456889999984433321 3688888 5766655
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
..... ...+++|+|||+.|++..... .
T Consensus 175 ~~~~~------------------~~~~i~~s~dg~~lyv~~~~~-----------------------------------~ 201 (326)
T 2ghs_A 175 FADIS------------------IPNSICFSPDGTTGYFVDTKV-----------------------------------N 201 (326)
T ss_dssp EEEES------------------SEEEEEECTTSCEEEEEETTT-----------------------------------C
T ss_pred eCCCc------------------ccCCeEEcCCCCEEEEEECCC-----------------------------------C
Confidence 43211 133688999999888764211 3
Q ss_pred EEEEEEcC--CC-ce---EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEE
Q 004067 286 RLGVVSAA--GG-PV---SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 354 (776)
Q Consensus 286 ~l~~~d~~--~~-~~---~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l 354 (776)
.|++++.+ +| +. ..+..- .........+.+++||.+++... ....|++||+++...+.+
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~------~~~~~~p~gi~~d~~G~lwva~~----~~~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDS------TGIKGGMDGSVCDAEGHIWNARW----GEGAVDRYDTDGNHIARY 266 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEEC------TTSSSEEEEEEECTTSCEEEEEE----TTTEEEEECTTCCEEEEE
T ss_pred EEEEEEcccccCCcccCceEEEEC------CCCCCCCCeeEECCCCCEEEEEe----CCCEEEEECCCCCEEEEE
Confidence 47778875 55 32 112110 12234556789999997433322 123599999854333333
No 392
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.15 E-value=4.7e-09 Score=105.56 Aligned_cols=224 Identities=10% Similarity=-0.001 Sum_probs=122.4
Q ss_pred CeeeEEEeecCCC----ceEEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCc
Q 004067 126 GVTRYEWVKTSSK----KKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINE 201 (776)
Q Consensus 126 ~~~~~~~sp~~~d----g~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~ 201 (776)
.+..+.+|| | ++.++... .++.+|++.+++.......+....+....+||||+.++-..
T Consensus 113 ~v~sla~sp---d~~~~~~~l~s~g-~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~------------- 175 (356)
T 2w18_A 113 EIRALFCSS---DDESEKQVLLKSG-NIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF------------- 175 (356)
T ss_dssp EEEEECC---------CCEEEEEEE-EEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE-------------
T ss_pred ceEEEEECC---CccccccEEEeCC-CeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeec-------------
Confidence 356777777 8 77777643 33556666665543111111222356666777776554111
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECC---CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCC
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSL---DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 278 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp---Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (776)
+ ..+. +..++||| |++.|+-.+.|
T Consensus 176 ---~-~~~~-------------------v~~l~fs~~~g~~~~LaSgS~D------------------------------ 202 (356)
T 2w18_A 176 ---L-MPPE-------------------ETILTFAEVQGMQEALLGTTIM------------------------------ 202 (356)
T ss_dssp ---E-CCCS-------------------SCEEEEEEEETSTTEEEEEETT------------------------------
T ss_pred ---c-CCCc-------------------eeeEEeeccCCCCceEEEecCC------------------------------
Confidence 1 1111 33567888 67888776644
Q ss_pred CCCCCeEEEEEEEcCCCce-EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEe--------ecCceEEEEEEECCCC
Q 004067 279 GASNVKVRLGVVSAAGGPV-SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN--------RSQTKLKVLKFDIKTG 349 (776)
Q Consensus 279 g~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~--------~~~~~~~l~~~d~~~g 349 (776)
..|.+||+++|+. +++... ......+..++|||||+.++..+. .+..+..|.+||+++|
T Consensus 203 ------~TIkIWDl~TGk~l~tL~g~------~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 203 ------NNIVIWNLKTGQLLKKMHID------DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp ------SEEEEEETTTCCEEEEEECC------C---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred ------CcEEEEECCCCcEEEEEcCC------CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 4589999999875 444211 111234566789999997765432 2345778999999998
Q ss_pred ceEEEEEec--cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEEEEEeecCCCc
Q 004067 350 QRKVILVEE--LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASG 426 (776)
Q Consensus 350 ~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~~~~~~s~dg~ 426 (776)
....+..-. +.. ...+... .. ++.++.+...++ .|.+||+.+++. ..|+.+...+...+.|||||+
T Consensus 271 k~l~v~~~~~p~Gh----~~~~lsg----~~-sg~~lASgS~Dg--TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~ 339 (356)
T 2w18_A 271 LSVGVMLYCLPPGQ----AGRFLEG----DV-KDHCAAAILTSG--TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDS 339 (356)
T ss_dssp EEEEEEEECCCTTC----CCCEEEE----EE-ETTEEEEEETTS--CEEEEETTTCSEEEEECCC--CCCCEEEECSSSS
T ss_pred EEEEEEEeeccCCC----cceeEcc----cc-CCCEEEEEcCCC--cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCC
Confidence 765433210 000 0000000 00 122444545566 899999988764 556555444444446999999
Q ss_pred EEEEEEccCCCceeeEEEE
Q 004067 427 QVYFTGTLDGPLESHLYCA 445 (776)
Q Consensus 427 ~i~~~~~~~~~~~~~l~~~ 445 (776)
+|+ ++..++. ++||++
T Consensus 340 ~La-SGS~D~T--IklWd~ 355 (356)
T 2w18_A 340 HLL-AGQKDGN--IFVYHY 355 (356)
T ss_dssp EEE-EECTTSC--EEEEEE
T ss_pred EEE-EEECCCc--EEEecC
Confidence 654 5555544 888875
No 393
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.14 E-value=3.7e-10 Score=131.03 Aligned_cols=244 Identities=9% Similarity=-0.002 Sum_probs=153.6
Q ss_pred cCCeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccc--eecCCCCCCCccCceeCCC--CCEEEEEEC-CcEEEEec
Q 004067 124 GLGVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPE--LKLSSSSCSPVIDPHLSSD--GTMIAFVRD-CELHVLNL 197 (776)
Q Consensus 124 ~~~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~SpD--g~~la~~~~-~~l~~~~l 197 (776)
...+....|+| ||++|+.. .++.|.+||+.++... ..+..+. ..+..+.|+|+ |+.|+..+. +.|++|++
T Consensus 9 ~~~V~~l~~s~---dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 9 NELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE-GPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp CCCEEEECCCS---SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCS-SCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cceeEEEEECC---CCCeEEEEECCCcEEEEecCCCCCccceeccCCc-CceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 45788999999 99998877 6889999999854333 2344333 34888999998 998888875 57999999
Q ss_pred CCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCC--CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecC
Q 004067 198 LINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD--SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 275 (776)
Q Consensus 198 ~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (776)
.+++...+...... ...+..+.|+|+ |+.|+..+.+
T Consensus 85 ~~~~~~~~~~~~~h---------------~~~V~~v~~sp~~~~~~l~sgs~d--------------------------- 122 (753)
T 3jro_A 85 ENGRWSQIAVHAVH---------------SASVNSVQWAPHEYGPLLLVASSD--------------------------- 122 (753)
T ss_dssp ETTEEEEEEEECCC---------------SSCEEEEEECCGGGCSEEEEEETT---------------------------
T ss_pred CCCcccccccccCC---------------CCCeEEEEECCCCCCCEEEEEeCC---------------------------
Confidence 99864333221110 011457889999 8888877643
Q ss_pred CCCCCCCCeEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEEEEEecc-------------CCeEEEEEEeecCceEEE
Q 004067 276 PFAGASNVKVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMH-------------GNILTAQVLNRSQTKLKV 341 (776)
Q Consensus 276 ~~~g~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~Sp-------------Dg~~l~~~~~~~~~~~~l 341 (776)
..|.+||+.++... .... ..+...+..+.|+| ||+.++..+ .+..|
T Consensus 123 ---------g~I~vwdl~~~~~~~~~~~-------~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs----~dg~I 182 (753)
T 3jro_A 123 ---------GKVSVVEFKENGTTSPIII-------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG----ADNLV 182 (753)
T ss_dssp ---------SEEEEEECCSSSCCCCEEE-------ECCSSCEEEEEECCCC---------CGGGCCEEEEE----TTSCE
T ss_pred ---------CcEEEEEeecCCCcceeEe-------ecCCCceEEEEecCcccccccccccCCCCCEEEEEE----CCCeE
Confidence 35899999877322 1111 34566789999999 577777665 34458
Q ss_pred EEEECCCCceE--EEE---EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce------eecccc
Q 004067 342 LKFDIKTGQRK--VIL---VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC------LGPITE 410 (776)
Q Consensus 342 ~~~d~~~g~~~--~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~------~~~lt~ 410 (776)
.+||+.++... .+. .+...... -.|+|.. ..+.++++...+| .|++|++.++. ......
T Consensus 183 ~iwd~~~~~~~~~~~~~~~~h~~~V~~---l~~sp~~-----~~~~~l~s~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~ 252 (753)
T 3jro_A 183 KIWKYNSDAQTYVLESTLEGHSDWVRD---VAWSPTV-----LLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEK 252 (753)
T ss_dssp EEEEEETTTTEEEEEEEECCCSSCEEE---EEECCCC-----SSSEEEEEEESSS--CEEEEEESSSSSCCBCCBSSSSC
T ss_pred EEEeccCCcccceeeeeecCCCCcEEE---EEeccCC-----CCCCEEEEEecCC--EEEEecCCCCCCcceeEEeccCC
Confidence 99998776432 211 12222111 1133310 0045667777777 78888877653 111222
Q ss_pred CCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 411 GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 411 ~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
+...+..+ .|+|+|+.++..+ .++. +.+|.+..
T Consensus 253 ~~~~v~~l-~~spdg~~l~s~s-~Dg~--I~vwd~~~ 285 (753)
T 3jro_A 253 FPDVLWRA-SWSLSGNVLALSG-GDNK--VTLWKENL 285 (753)
T ss_dssp CSSCCCCE-EECTTTCCEEEEC-SSSC--EECCBCCS
T ss_pred CCCceEEE-EEcCCCCEEEEEc-CCCE--EEEEecCC
Confidence 33334444 4999999655544 4433 77877763
No 394
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.12 E-value=2.7e-08 Score=101.16 Aligned_cols=202 Identities=15% Similarity=0.104 Sum_probs=128.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
...|.|+|+++.|+|..... ..|+++|+++++.+.+.. ...+..+.++|
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~-------------------------~~~~~~i~~~~-- 63 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPA----KKVCRWDSFTKQVQRVTM-------------------------DAPVSSVALRQ-- 63 (297)
T ss_dssp EEEEEEETTTTEEEEEETTT----TEEEEEETTTCCEEEEEC-------------------------SSCEEEEEEBT--
T ss_pred ccCCeEECCCCEEEEEECCC----CEEEEEECCCCcEEEEeC-------------------------CCceEEEEECC--
Confidence 36899999999999987644 479999999987754432 13567889999
Q ss_pred CCceEEEEeCCCcEEEEeCCCCccceecCCCC----CCCccCceeCCCCCEEEEEEC------------CcEEEEecCCC
Q 004067 137 SKKKIIMVPLPDGIYFQDLSCSKPELKLSSSS----CSPVIDPHLSSDGTMIAFVRD------------CELHVLNLLIN 200 (776)
Q Consensus 137 ~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~----~~~~~~~~~SpDg~~la~~~~------------~~l~~~~l~~g 200 (776)
||+ |++..+..|+++|.++++.+ .+.... ........++|||+.++-... ..||.++.+ |
T Consensus 64 -dG~-l~v~~~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g 139 (297)
T 3g4e_A 64 -SGG-YVATIGTKFCALNWKEQSAV-VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-H 139 (297)
T ss_dssp -TSS-EEEEETTEEEEEETTTTEEE-EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-S
T ss_pred -CCC-EEEEECCeEEEEECCCCcEE-EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-C
Confidence 999 55555778999999988876 443221 112455789999984332221 248888775 4
Q ss_pred ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 201 EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 201 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
+...+..... ...+++|+|||+.|++.....
T Consensus 140 ~~~~~~~~~~------------------~pngi~~spdg~~lyv~~~~~------------------------------- 170 (297)
T 3g4e_A 140 HVKKYFDQVD------------------ISNGLDWSLDHKIFYYIDSLS------------------------------- 170 (297)
T ss_dssp CEEEEEEEES------------------BEEEEEECTTSCEEEEEEGGG-------------------------------
T ss_pred CEEEEeeccc------------------cccceEEcCCCCEEEEecCCC-------------------------------
Confidence 4443332211 134788999999887655321
Q ss_pred CCCeEEEEEEEc--CCCceEE--EEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEE
Q 004067 281 SNVKVRLGVVSA--AGGPVSW--MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 355 (776)
Q Consensus 281 ~~~~~~l~~~d~--~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~ 355 (776)
..|++++. ++|+... +-.. ..........+++++||++ +..... ...|++||+++|+.....
T Consensus 171 ----~~i~~~~~d~~~G~~~~~~~~~~-----~~~~~~~p~g~~~d~~G~l-wva~~~---~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 171 ----YSVDAFDYDLQTGQISNRRSVYK-----LEKEEQIPDGMCIDAEGKL-WVACYN---GGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp ----TEEEEEEECTTTCCEEEEEEEEE-----CCGGGCEEEEEEEBTTSCE-EEEEET---TTEEEEECTTTCCEEEEE
T ss_pred ----CcEEEEeccCCCCcccCcEEEEE-----CCCCCCCCCeeEECCCCCE-EEEEcC---CCEEEEEcCCCceEEEEE
Confidence 23566665 4555321 1110 0122345677899999973 333322 235999999988765443
No 395
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.10 E-value=2.1e-07 Score=102.78 Aligned_cols=295 Identities=13% Similarity=-0.012 Sum_probs=167.5
Q ss_pred CcCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecC--CCce-EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeE
Q 004067 54 YVAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPK--TCKQ-ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRY 130 (776)
Q Consensus 54 ~~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~--~~~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (776)
|..+..+.+||||++++... .+ ..|.++|+. +++. .++.. +.+...+
T Consensus 196 g~~p~~v~~SpDGr~lyv~~-~d----g~V~viD~~~~t~~~v~~i~~-------------------------G~~P~~i 245 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIG-RD----GKVNMIDLWMKEPTTVAEIKI-------------------------GSEARSI 245 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEE-TT----SEEEEEETTSSSCCEEEEEEC-------------------------CSEEEEE
T ss_pred CCCccceEECCCCCEEEEEc-CC----CeEEEEECCCCCCcEeEEEec-------------------------CCCCcee
Confidence 34456889999999877543 23 469999995 5543 22221 2244577
Q ss_pred EEe----ecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCC----------CCCccCceeCCCCCEEEEEEC--CcE
Q 004067 131 EWV----KTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSS----------CSPVIDPHLSSDGTMIAFVRD--CEL 192 (776)
Q Consensus 131 ~~s----p~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~----------~~~~~~~~~SpDg~~la~~~~--~~l 192 (776)
.+| | ||+++++. ..+.+.++|..+.+....+.... ..++..+..|+++..+++... +.|
T Consensus 246 a~s~~~~p---DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 246 ETSKMEGW---EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EECCSTTC---TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred EEccccCC---CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 899 8 99999987 56789999998887663332111 113445677888887666653 579
Q ss_pred EEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcce
Q 004067 193 HVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQED 272 (776)
Q Consensus 193 ~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (776)
+++|..+.....++.-+.. .+ .....|+|||++++......
T Consensus 323 ~~vd~~~~~~~~v~~i~~~--------~~--------~~d~~~~pdgr~~~va~~~s----------------------- 363 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAE--------RF--------LHDGGLDGSHRYFITAANAR----------------------- 363 (567)
T ss_dssp EEEETTCSSEEEEEEEECC--------SS--------EEEEEECTTSCEEEEEEGGG-----------------------
T ss_pred EEEecCCCccceeeeeecc--------cc--------ccCceECCCCCEEEEEeCCC-----------------------
Confidence 9999876543333321110 00 22567999999887665321
Q ss_pred ecCCCCCCCCCeEEEEEEEcCCCceEEE-EcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCc-
Q 004067 273 HAYPFAGASNVKVRLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ- 350 (776)
Q Consensus 273 ~~~~~~g~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~- 350 (776)
..|.++|+++++.... ... +. ..+.+....+ +.||+..++.+.+.+ ...|.++|.+++.
T Consensus 364 ------------n~V~ViD~~t~kl~~~i~vg-g~---~Phpg~g~~~-~~p~~g~v~~t~~~g--~~~Vsvid~~~~~~ 424 (567)
T 1qks_A 364 ------------NKLVVIDTKEGKLVAIEDTG-GQ---TPHPGRGANF-VHPTFGPVWATSHMG--DDSVALIGTDPEGH 424 (567)
T ss_dssp ------------TEEEEEETTTTEEEEEEECS-SS---SBCCTTCEEE-EETTTEEEEEEEBSS--SSEEEEEECCTTTC
T ss_pred ------------CeEEEEECCCCcEEEEEecc-Cc---CCCCccceee-ECCCCCcEEEeCCCC--CCeEEEecCCCCCC
Confidence 3578899999986543 220 10 1111111122 588877666555433 2348888887632
Q ss_pred ----eEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCC-----ceEEEEEeCCCc-----ee--eccc-----
Q 004067 351 ----RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG-----FRHLYLHDINGT-----CL--GPIT----- 409 (776)
Q Consensus 351 ----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g-----~~~l~~~~~~g~-----~~--~~lt----- 409 (776)
.+.+..-.... ..+.|-- .+. ++..+|++..-+ ...|.++|.++. .. ..+.
T Consensus 425 ~~~~~kvv~~i~~~g---~g~~~i~----~~p-~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~ 496 (567)
T 1qks_A 425 PDNAWKILDSFPALG---GGSLFIK----THP-NSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWA 496 (567)
T ss_dssp TTTBTSEEEEEECSC---SCCCCEE----CCT-TCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHH
T ss_pred ccccCEEEEEEecCC---CCCEEEE----eCC-CCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEecccccc
Confidence 22221111110 0011100 011 344667765422 358999986644 11 2221
Q ss_pred ---cCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeC
Q 004067 410 ---EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY 448 (776)
Q Consensus 410 ---~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~ 448 (776)
++...+..+. |++||+.+|++..........|..++..
T Consensus 497 ~~~~~~~~~~~~~-~~~~G~~~~~s~~~~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 497 GITEGQPRVVQGE-FNKDGTEVWFSVWNGKDQESALVVVDDK 537 (567)
T ss_dssp TCCSSCCEEEEEE-ECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred ccCCCCcceEeee-ECCCCCEEEEEeecCCCCCCcEEEEECC
Confidence 2234455554 9999999999854211112467777763
No 396
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=7e-08 Score=101.63 Aligned_cols=304 Identities=13% Similarity=0.083 Sum_probs=162.2
Q ss_pred cCCCCEEEEEeCCCCcCc-ceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceE
Q 004067 63 SPDDNLITYLLSPDHSLS-RKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKI 141 (776)
Q Consensus 63 SpDG~~ia~~~~~~~~~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~ 141 (776)
.||+++++ +.+...... ..|.++|+++++...-... +..- .+.+|| ||++
T Consensus 81 ~~~~~~vy-V~n~~~~~~~~~VsVID~~t~~vv~~I~v------------------------G~~P-gia~Sp---Dgk~ 131 (426)
T 3c75_H 81 APDARRVY-IQDPAHFAAITQQFVIDGSTGRILGMTDG------------------------GFLP-HPVAAE---DGSF 131 (426)
T ss_dssp CCCTTEEE-EEECTTTCSSEEEEEEETTTTEEEEEEEE------------------------CSSC-EEEECT---TSSC
T ss_pred CCCCCEEE-EECCCcCCCCCeEEEEECCCCEEEEEEEC------------------------CCCC-ceEECC---CCCE
Confidence 47898765 544321111 6899999999887443321 1223 788999 9999
Q ss_pred EEEeC-----------CCcEEEEeCCCCccceecCCC-C-----CCCccCceeCCCCCEEEEEEC---CcEEEEecCCCc
Q 004067 142 IMVPL-----------PDGIYFQDLSCSKPELKLSSS-S-----CSPVIDPHLSSDGTMIAFVRD---CELHVLNLLINE 201 (776)
Q Consensus 142 l~~~~-----------~~~l~~~d~~~~~~~~~l~~~-~-----~~~~~~~~~SpDg~~la~~~~---~~l~~~~l~~g~ 201 (776)
|++.. ++.|.++|..+.+....+.-. . ......+.+||||++++.... +.|.++|+++++
T Consensus 132 lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 132 FAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred EEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 99874 356999999998876333321 1 123567999999998777652 469999999987
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
...-..-+....... . +...-+.+++||+.++. ....+....
T Consensus 212 vv~~I~v~g~~~~~p--------~--g~~~~v~~~~dG~~~~V-~~~~~~v~~--------------------------- 253 (426)
T 3c75_H 212 FDRMLDVPDCYHIFP--------A--SPTVFYMNCRDGSLARV-DFADGETKV--------------------------- 253 (426)
T ss_dssp EEEEEECCSEEEEEE--------E--ETTEEEEEETTSSEEEE-ECCTTCCEE---------------------------
T ss_pred EEEEEEcCCceeecc--------C--CCcEEEEEcCCCCEEEE-ECCCCcEEE---------------------------
Confidence 643222221000000 0 00112445666664433 222111000
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec---
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE--- 358 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--- 358 (776)
.. + ..+.. ........+.+++||+.+++... ...++.+|..++..+.+..-.
T Consensus 254 -------~~---~---~~~~v--------~~~p~~~~~~~~~dg~~~~~~s~----~g~V~ViD~~~~~~~v~~~~~~~~ 308 (426)
T 3c75_H 254 -------TN---T---EVFHT--------EDELLINHPAFSLRSGRLVWPTY----TGKIFQADLTAEGATFRAPIEALT 308 (426)
T ss_dssp -------EE---C---CCCSC--------TTSCBCSCCEECTTTCEEEEEBT----TSEEEEEEECSSCEEECCCEESSC
T ss_pred -------Ee---e---eeecc--------CCCceeeEeeecCCCCEEEEEeC----CCcEEEEeccCCceEEeeeeeecc
Confidence 00 0 00100 01111123578999987777653 236999999876655432110
Q ss_pred ----cCceeecccccccCCC---CccccCCeEEEEecc-------CCceEEEEEeCCCce-eeccccCCeEEEEEEeecC
Q 004067 359 ----LDSWVNLHDCFTPLDK---GVTKYSGGFIWASEK-------TGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNE 423 (776)
Q Consensus 359 ----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~-------~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~ 423 (776)
...|. |.+. .++.+++.+|..... .+...|.++|+.+.+ ...|.-+. ...++ .|++
T Consensus 309 ~~~i~~g~~-------p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gi-a~sp 379 (426)
T 3c75_H 309 EAERADDWR-------PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSI-NVSQ 379 (426)
T ss_dssp TTTGGGTEE-------ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEE-EECC
T ss_pred ccccccccc-------cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeE-EEcc
Confidence 01121 2111 123334445544322 134589999988765 34454332 23344 4899
Q ss_pred CCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceee-cCCCCeEEEEEcCCc
Q 004067 424 ASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL-TNGKGKHVAVLDHNM 476 (776)
Q Consensus 424 dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l-~~~~~~~~~~~spdg 476 (776)
||+..+|.++... ..|..+|+. .++ .+.++ ..+.+ ....++||.
T Consensus 380 Dg~~~lyv~n~~s---~~VsVID~~-t~k----vv~tI~~vG~~-P~~i~~~~~ 424 (426)
T 3c75_H 380 DAEPLLYALSAGT---QTLHIYDAA-TGE----ELRSVDQLGRG-PQIITTHDM 424 (426)
T ss_dssp SSSCEEEEEETTT---TEEEEEETT-TCC----EEEEECCCSSS-CCEEECCCC
T ss_pred CCCEEEEEEcCCC---CeEEEEECC-CCC----EEEEecCCCCC-CcEEEcCCC
Confidence 9994445555422 357777774 232 45555 22222 235667664
No 397
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.06 E-value=8.8e-09 Score=107.31 Aligned_cols=146 Identities=8% Similarity=-0.038 Sum_probs=104.5
Q ss_pred CCceeEcC--CCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 57 PTSIGFSP--DDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 57 ~~~~~~Sp--DG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
+..+.|+| +|++|+..+.+ ..|.+||+.+++...+..... ...+....|+|
T Consensus 128 v~~~~~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~----------------------~~~i~~~~~~p 180 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKS----------------------DVEYSSGVLHK 180 (343)
T ss_dssp EEEEECCC---CCEEEEEETT-----CCEEEEESSSSCEEEEECCCS----------------------SCCCCEEEECT
T ss_pred EEEEEcCCCCCCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCC----------------------CCceEEEEECC
Confidence 57889999 99999866542 369999999988755542111 13578899999
Q ss_pred cCCCceEEEE-eCCCcEEEEeCCCCccc-eecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCceeE-EeeCCCC
Q 004067 135 TSSKKKIIMV-PLPDGIYFQDLSCSKPE-LKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINEQRQ-LTHGANG 211 (776)
Q Consensus 135 ~~~dg~~l~~-~~~~~l~~~d~~~~~~~-~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~~~~-lt~~~~~ 211 (776)
||+.|+. ..++.|.+||+.+++.. ..+.......+..+.|||||+.|+..+++.|.+||+.+++... +......
T Consensus 181 ---dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~ 257 (343)
T 3lrv_A 181 ---DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIP 257 (343)
T ss_dssp ---TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-
T ss_pred ---CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccc
Confidence 9999998 47899999999988764 3455412335889999999999999998899999998875422 1110000
Q ss_pred CceecCCcccceecccCCc--ceEEECCCCCeEEEEEe
Q 004067 212 NTVTHGLAEYIAQEEMDRK--TGYWWSLDSKFIAFTQV 247 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~--~~~~wspDg~~l~~~~~ 247 (776)
.... ..++|+|||+.|+..+.
T Consensus 258 ---------------~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 258 ---------------EFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp -------------------CCEEEEECTTSSEEEEEET
T ss_pred ---------------cccccceEEEECCCCCEEEEecC
Confidence 0001 24889999999987653
No 398
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.05 E-value=2.8e-08 Score=107.25 Aligned_cols=263 Identities=13% Similarity=0.085 Sum_probs=160.9
Q ss_pred eeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCc
Q 004067 60 IGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKK 139 (776)
Q Consensus 60 ~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg 139 (776)
..+++||++|+..+.+ ..|.+||+.+++........ ...+..+.| |+
T Consensus 137 ~~~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~h-----------------------~~~v~~l~~-----~~ 183 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRD-----NTIKIWDKNTLECKRILTGH-----------------------TGSVLCLQY-----DE 183 (435)
T ss_dssp EEEECCSSEEEEEESS-----SCEEEEESSSCCEEEEECCC-----------------------SSCEEEEEC-----CS
T ss_pred EEEEECCCEEEEEeCC-----CeEEEEeCCCCeEEEEEcCC-----------------------CCcEEEEEE-----CC
Confidence 3678899999866542 46999999988875544311 135655544 67
Q ss_pred eEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEe--eCCCCCcee
Q 004067 140 KIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLT--HGANGNTVT 215 (776)
Q Consensus 140 ~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt--~~~~~~~~~ 215 (776)
+.|+.. .++.|.+||+.+++....+..... .+..+.|++ ..++..+. +.|.+|++.+++...+. ..+..
T Consensus 184 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~---- 256 (435)
T 1p22_A 184 RVIITGSSDSTVRVWDVNTGEMLNTLIHHCE-AVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR---- 256 (435)
T ss_dssp SEEEEEETTSCEEEEESSSCCEEEEECCCCS-CEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCS----
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcCCCC-cEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC----
Confidence 777765 788999999999887644544333 477778864 46666554 57999999987654221 11111
Q ss_pred cCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCC
Q 004067 216 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG 295 (776)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 295 (776)
..+..+.| |++.|+..+.+ ..|.+||+.++
T Consensus 257 ------------~~v~~~~~--~~~~l~s~~~d------------------------------------g~i~vwd~~~~ 286 (435)
T 1p22_A 257 ------------AAVNVVDF--DDKYIVSASGD------------------------------------RTIKVWNTSTC 286 (435)
T ss_dssp ------------SCEEEEEE--ETTEEEEEETT------------------------------------SEEEEEETTTC
T ss_pred ------------CcEEEEEe--CCCEEEEEeCC------------------------------------CeEEEEECCcC
Confidence 01335556 78888776533 35899999988
Q ss_pred ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE-eccCceeecccccccCCC
Q 004067 296 PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVNLHDCFTPLDK 374 (776)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~ 374 (776)
+....- ..+...+..+.| +++.++..+ .+..|.+||+.+++...... +......
T Consensus 287 ~~~~~~--------~~~~~~v~~~~~--~~~~l~~g~----~dg~i~iwd~~~~~~~~~~~~h~~~v~~----------- 341 (435)
T 1p22_A 287 EFVRTL--------NGHKRGIACLQY--RDRLVVSGS----SDNTIRLWDIECGACLRVLEGHEELVRC----------- 341 (435)
T ss_dssp CEEEEE--------ECCSSCEEEEEE--ETTEEEEEE----TTSCEEEEETTTCCEEEEECCCSSCEEE-----------
T ss_pred cEEEEE--------cCCCCcEEEEEe--CCCEEEEEe----CCCeEEEEECCCCCEEEEEeCCcCcEEE-----------
Confidence 754431 234556777777 456666655 34569999999887654433 2222111
Q ss_pred CccccCCeEEEEeccCCceEEEEEeCCCce----------eeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEE
Q 004067 375 GVTKYSGGFIWASEKTGFRHLYLHDINGTC----------LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 444 (776)
Q Consensus 375 ~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~----------~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~ 444 (776)
+.+ ++.++++...+| .|.+||+.++. ...+..+...+..+. | +++. +++++.++ .+.+|.
T Consensus 342 -~~~-~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~-~--~~~~-l~s~s~Dg--~i~iwd 411 (435)
T 1p22_A 342 -IRF-DNKRIVSGAYDG--KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ-F--DEFQ-IVSSSHDD--TILIWD 411 (435)
T ss_dssp -EEC-CSSEEEEEETTS--CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE-E--CSSC-EEECCSSS--EEEEEC
T ss_pred -EEe-cCCEEEEEeCCC--cEEEEECCCCCCccccccchheeeccCCCCCeEEEE-e--CCCE-EEEEeCCC--EEEEEE
Confidence 123 344566666677 78888875442 344555544455443 4 6665 44444444 378888
Q ss_pred EEe
Q 004067 445 AKL 447 (776)
Q Consensus 445 ~~~ 447 (776)
+.-
T Consensus 412 ~~~ 414 (435)
T 1p22_A 412 FLN 414 (435)
T ss_dssp ---
T ss_pred CCC
Confidence 864
No 399
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.05 E-value=9.7e-10 Score=120.06 Aligned_cols=210 Identities=14% Similarity=0.084 Sum_probs=123.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHH--HhCCcEEEEECCCC----CCCCchhhhhhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL--RSKGILVWKLDNRG----TARRGLKFEASI 610 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l--~~~G~~v~~~d~rg----~g~~~~~~~~~~ 610 (776)
+...+|.|... ...+++|+||++|||+........+ .. ...+ ...|++|+++|||. ++.... ..
T Consensus 86 l~l~v~~P~~~-~~~~~~Pviv~iHGGg~~~g~~~~~----~~-~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~-~~--- 155 (522)
T 1ukc_A 86 LFINVFKPSTA-TSQSKLPVWLFIQGGGYAENSNANY----NG-TQVIQASDDVIVFVTFNYRVGALGFLASEK-VR--- 155 (522)
T ss_dssp CEEEEEEETTC-CTTCCEEEEEEECCSTTTSCCSCSC----CC-HHHHHHTTSCCEEEEECCCCHHHHHCCCHH-HH---
T ss_pred CEEEEEECCCC-CCCCCCCEEEEECCCccccCCcccc----Cc-HHHHHhcCCcEEEEEecccccccccccchh-cc---
Confidence 66778888653 1225789999999987544322222 11 1222 25699999999993 221111 00
Q ss_pred hhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhC----CCceEEEEEcCCCCCcccccc---
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF----PDVFQCAVSGAPVTSWDGYDT--- 680 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~----~~~~~~~v~~~~~~~~~~~~~--- 680 (776)
....+...+.|+..+++|+.++ ...|+++|.|+|+|.||+++..++... +.+|+++|+.+|.........
T Consensus 156 ~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~ 235 (522)
T 1ukc_A 156 QNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEME 235 (522)
T ss_dssp HSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCSGGGH
T ss_pred ccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCHHHHH
Confidence 0011234588999999999875 346899999999999999888777653 568999999988653211100
Q ss_pred cccccc---cCCCC--CCccchhcCChhhhhc---------cCCCc--EEEEecCCCCccChHHHHHHHHHHHHCCCCeE
Q 004067 681 FYTEKY---MGLPS--EDPVGYEYSSVMHHVH---------KMKGK--LLLVHGMIDENVHFRHTARLINALVAARKPYE 744 (776)
Q Consensus 681 ~~~~~~---~~~~~--~~~~~~~~~~~~~~~~---------~i~~P--~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 744 (776)
.+...+ ++... ...+-+...+....+. ....| .+.++...|..+.+....++.+..+..++++.
T Consensus 236 ~~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~~vp~l 315 (522)
T 1ukc_A 236 FQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFIKVPVL 315 (522)
T ss_dssp HHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSCCCCEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcCCCCCCCEE
Confidence 000111 12111 1111111222111111 11223 45567777877777777777766544556777
Q ss_pred EEEecCCCCCCC
Q 004067 745 ILIFPDERHMPR 756 (776)
Q Consensus 745 ~~~~~~~~H~~~ 756 (776)
+-...+++|.+.
T Consensus 316 ~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 316 VGDDTDEGSNFA 327 (522)
T ss_dssp EEEETBGGGGTS
T ss_pred EEeecchhHHhh
Confidence 777888888764
No 400
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=99.03 E-value=3.7e-10 Score=120.70 Aligned_cols=112 Identities=14% Similarity=0.024 Sum_probs=81.7
Q ss_pred CCceEEEEEcCCCCcccccccccccchh-hhHHHHh-CCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 629 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l 629 (776)
...|+||++||++++.. ..| .. ++..|.+ .||.|+++|+||+|.+.......... ...+|+.+.++++
T Consensus 68 ~~~p~vvliHG~~~~~~--~~w----~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~----~~~~dl~~li~~L 137 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGE--DGW----LLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTR----VVGAEIAFLVQVL 137 (452)
T ss_dssp TTSEEEEEECCSCCTTC--TTH----HHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCC--chH----HHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHH----HHHHHHHHHHHHH
Confidence 34689999999876541 123 22 3455554 49999999999998876321111111 1256788888888
Q ss_pred HHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 630 IKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 630 ~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
.++..++.+++.|+||||||++|+.++.++|++++++++++|..
T Consensus 138 ~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 138 STEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp HHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 76544567899999999999999999999999999999987754
No 401
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=99.02 E-value=4e-10 Score=110.96 Aligned_cols=184 Identities=10% Similarity=-0.014 Sum_probs=108.1
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 633 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 633 (776)
.|.|+++||.+++.. .|..++..|. .+|.|+.+|+||++. ..+++.+.++.+ .
T Consensus 22 ~~~l~~~hg~~~~~~-------~~~~~~~~l~-~~~~v~~~d~~g~~~----------------~~~~~~~~i~~~---~ 74 (244)
T 2cb9_A 22 GKNLFCFPPISGFGI-------YFKDLALQLN-HKAAVYGFHFIEEDS----------------RIEQYVSRITEI---Q 74 (244)
T ss_dssp SSEEEEECCTTCCGG-------GGHHHHHHTT-TTSEEEEECCCCSTT----------------HHHHHHHHHHHH---C
T ss_pred CCCEEEECCCCCCHH-------HHHHHHHHhC-CCceEEEEcCCCHHH----------------HHHHHHHHHHHh---C
Confidence 367899999776543 3344455565 589999999997631 134555544443 1
Q ss_pred CCCCCcEEEEeechHHHHHHHHHhhC---CCceEEEEEcCCCCCccccccc----ccccccCCCCCCccch-------hc
Q 004067 634 LAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWDGYDTF----YTEKYMGLPSEDPVGY-------EY 699 (776)
Q Consensus 634 ~id~~~i~l~G~S~GG~~a~~~a~~~---~~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~ 699 (776)
...++.++||||||.+++.++.+. ++.+..+++.++.......... ....++ .+. ....+ ..
T Consensus 75 --~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~ 150 (244)
T 2cb9_A 75 --PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAYL-PEA-VRETVMQKKRCYQE 150 (244)
T ss_dssp --SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CCS-CHH-HHHHHTHHHHHHHH
T ss_pred --CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHHh-HHH-HHHHHHHHHHHHHH
Confidence 135799999999999999998764 5678888877765321100000 000000 000 00000 00
Q ss_pred CCh-hhhhccCCCcEEEEecC--CCCccChHHHHHHHHHHHH-CCCCeEEEEecCCCCC-CCCCCcHHHHHHHHHHHHHH
Q 004067 700 SSV-MHHVHKMKGKLLLVHGM--IDENVHFRHTARLINALVA-ARKPYEILIFPDERHM-PRRHRDRIYMEERIWEFIER 774 (776)
Q Consensus 700 ~~~-~~~~~~i~~P~lii~G~--~D~~v~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~~~fl~~ 774 (776)
+.. ......+++|+++++|+ .|.. ++... ..+.+ ...+++++.+++ +|. +...+....+.+.+.+||.+
T Consensus 151 ~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~----~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~~L~~ 224 (244)
T 2cb9_A 151 YWAQLINEGRIKSNIHFIEAGIQTETS-GAMVL----QKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIILNILDK 224 (244)
T ss_dssp HHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHT----TSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHhhccCCCcCCCEEEEEccCccccc-cccch----hHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHHHHHhc
Confidence 000 01235678999999999 8873 33222 12222 124689999996 883 22445677888888998875
No 402
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.01 E-value=4e-07 Score=98.45 Aligned_cols=267 Identities=12% Similarity=0.041 Sum_probs=163.9
Q ss_pred EEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeC
Q 004067 131 EWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHG 208 (776)
Q Consensus 131 ~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~ 208 (776)
.+++ ||+.|+.. .++.|.+||+.+++....+..... .+..+.|+ ++.|+..+. +.|.+|++.+++.......
T Consensus 124 ~~~~---~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 197 (445)
T 2ovr_B 124 CLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG-GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYG 197 (445)
T ss_dssp EEEE---ETTEEEEEETTSCEEEEETTTCCEEEECCCCSS-CEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEE---cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC-CEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECC
Confidence 5777 89988876 788999999998887645544333 46677776 556666664 5799999999876543322
Q ss_pred CCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEE
Q 004067 209 ANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 288 (776)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~ 288 (776)
... .+..+.| +++.|+..+.+ ..|.
T Consensus 198 h~~-----------------~v~~~~~--~~~~l~s~s~d------------------------------------g~i~ 222 (445)
T 2ovr_B 198 HTS-----------------TVRCMHL--HEKRVVSGSRD------------------------------------ATLR 222 (445)
T ss_dssp CSS-----------------CEEEEEE--ETTEEEEEETT------------------------------------SEEE
T ss_pred CCC-----------------cEEEEEe--cCCEEEEEeCC------------------------------------CEEE
Confidence 211 1334556 46667665533 3589
Q ss_pred EEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE-eccCceeeccc
Q 004067 289 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVNLHD 367 (776)
Q Consensus 289 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~ 367 (776)
+||+.+++....- ..+...+..+.| ||+.++... .+..|.+||+.+++...... +......
T Consensus 223 ~wd~~~~~~~~~~--------~~~~~~v~~~~~--~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~v~~---- 284 (445)
T 2ovr_B 223 VWDIETGQCLHVL--------MGHVAAVRCVQY--DGRRVVSGA----YDFMVKVWDPETETCLHTLQGHTNRVYS---- 284 (445)
T ss_dssp EEESSSCCEEEEE--------ECCSSCEEEEEE--CSSCEEEEE----TTSCEEEEEGGGTEEEEEECCCSSCEEE----
T ss_pred EEECCCCcEEEEE--------cCCcccEEEEEE--CCCEEEEEc----CCCEEEEEECCCCcEeEEecCCCCceEE----
Confidence 9999988755431 345566777888 777776665 34569999998877544332 2221111
Q ss_pred ccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEE
Q 004067 368 CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 446 (776)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~ 446 (776)
+.+ ++..+++...+| .|.+||+.+++ ...+..+...+.. ++++++.++ .+..++. +.+|.+.
T Consensus 285 --------~~~-~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~---~~~~~~~l~-~~~~dg~--i~vwd~~ 347 (445)
T 2ovr_B 285 --------LQF-DGIHVVSGSLDT--SIRVWDVETGNCIHTLTGHQSLTSG---MELKDNILV-SGNADST--VKIWDIK 347 (445)
T ss_dssp --------EEE-CSSEEEEEETTS--CEEEEETTTCCEEEEECCCCSCEEE---EEEETTEEE-EEETTSC--EEEEETT
T ss_pred --------EEE-CCCEEEEEeCCC--eEEEEECCCCCEEEEEcCCcccEEE---EEEeCCEEE-EEeCCCe--EEEEECC
Confidence 123 334556666666 79999987665 3445544443443 344667544 4444433 6676654
Q ss_pred eCCCCCCccccceeecC---C-CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEee
Q 004067 447 LYPDWNHTLEAPVKLTN---G-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 506 (776)
Q Consensus 447 ~~~~g~~~~~~~~~l~~---~-~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l 506 (776)
.+. ....+.. + ..+..+.+ +++.|+..... ..|.+++..+++.+..+
T Consensus 348 ---~~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d----g~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 348 ---TGQ----CLQTLQGPNKHQSAVTCLQF--NKNFVITSSDD----GTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp ---TCC----EEEEECSTTSCSSCEEEEEE--CSSEEEEEETT----SEEEEEETTTCCEEEEE
T ss_pred ---CCc----EEEEEccCCCCCCCEEEEEE--CCCEEEEEeCC----CeEEEEECCCCceeeee
Confidence 232 4455543 2 23455566 45666655432 47999999999876665
No 403
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=99.01 E-value=2.1e-09 Score=107.38 Aligned_cols=153 Identities=13% Similarity=0.040 Sum_probs=95.1
Q ss_pred CceEEEEEcCCCCcccccccccccch-hhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVD-MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
..+.||++||..++.. . .|. .++..|.++||.|+.+|+||+|.+.... ..+++.+.++.+.+
T Consensus 64 ~~~pVVLvHG~~~~~~--~----~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~~-----------~~~~la~~I~~l~~ 126 (316)
T 3icv_A 64 VSKPILLVPGTGTTGP--Q----SFDSNWIPLSAQLGYTPCWISPPPFMLNDTQV-----------NTEYMVNAITTLYA 126 (316)
T ss_dssp CSSEEEEECCTTCCHH--H----HHTTTHHHHHHHTTCEEEEECCTTTTCSCHHH-----------HHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCcH--H----HHHHHHHHHHHHCCCeEEEecCCCCCCCcHHH-----------HHHHHHHHHHHHHH
Confidence 3467889999766531 1 233 4578899999999999999987543211 14567777777776
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhC---CCceEEEEEcCCCCCcccccccccccccCCCCCCccc--hhcCCh-hhh
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVG--YEYSSV-MHH 705 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~ 705 (776)
.. ..+++.|+||||||.++.+++..+ +++++.+|+++|...-......... +. ...... +...+. +..
T Consensus 127 ~~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt~~a~l~~~--~~--~~~~a~~q~~~gS~fl~~ 200 (316)
T 3icv_A 127 GS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDA--LA--VSAPSVWQQTTGSALTTA 200 (316)
T ss_dssp HT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBSCC--------C--CCCHHHHHTBTTCHHHHH
T ss_pred Hh--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCCchhhhhhhh--cc--ccChhHHhhCCCCHHHHH
Confidence 54 336899999999999998777765 5889999998876432211111000 00 000000 001111 111
Q ss_pred hc-----cCCCcEEEEecCCCCccChHH
Q 004067 706 VH-----KMKGKLLLVHGMIDENVHFRH 728 (776)
Q Consensus 706 ~~-----~i~~P~lii~G~~D~~v~~~~ 728 (776)
+. .-..|+..|+...|.+|.|..
T Consensus 201 Ln~~~~~~~~v~~tsI~S~~D~iV~P~~ 228 (316)
T 3icv_A 201 LRNAGGLTQIVPTTNLYSATDEIVQPQV 228 (316)
T ss_dssp HHHTTTTBCSSCEEEEECTTCSSSCCCC
T ss_pred HhhcCCCCCCCcEEEEEcCCCCCccCCc
Confidence 11 114689999999999997665
No 404
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.99 E-value=1.9e-08 Score=106.87 Aligned_cols=246 Identities=10% Similarity=-0.040 Sum_probs=132.0
Q ss_pred EEeecCCCceEEEEe-CCCcEEEEeCCCCccce--ec--CCCCCCCccCceeCC--------CCCEEEEEEC-CcEEEEe
Q 004067 131 EWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPEL--KL--SSSSCSPVIDPHLSS--------DGTMIAFVRD-CELHVLN 196 (776)
Q Consensus 131 ~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~--~l--~~~~~~~~~~~~~Sp--------Dg~~la~~~~-~~l~~~~ 196 (776)
.+++ +++.|+.. .++.|.+||+.+++... .+ ..+....+..++|+| ||+.||-.+. +.|.+||
T Consensus 96 ~~~~---~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 96 SSPV---YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp -CCE---EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred ecCC---CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 3455 77777765 68889999999886541 11 122233588899998 9999998886 4699999
Q ss_pred cCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCC
Q 004067 197 LLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYP 276 (776)
Q Consensus 197 l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (776)
+.++........... .+..++|+|++..++.....+
T Consensus 173 ~~~~~~~~~~~~~~~-----------------~v~~v~~~p~~~~~l~~~~~d--------------------------- 208 (393)
T 4gq1_A 173 LTDEGPILAGYPLSS-----------------PGISVQFRPSNPNQLIVGERN--------------------------- 208 (393)
T ss_dssp EETTEEEEEEEECSS-----------------CEEEEEEETTEEEEEEEEETT---------------------------
T ss_pred CCCCceeeeecCCCC-----------------CcEEEEECCCCCceEEecCCC---------------------------
Confidence 987654333222211 144788999987544433222
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEcccC------------CC-----CCCCCcceEEEEEec-cCCeEEEEEEeecCce
Q 004067 277 FAGASNVKVRLGVVSAAGGPVSWMDLQCG------------GT-----DQNYDEEYLARVNWM-HGNILTAQVLNRSQTK 338 (776)
Q Consensus 277 ~~g~~~~~~~l~~~d~~~~~~~~l~~~~~------------~~-----~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~ 338 (776)
..|.+||+.+++......... .+ ....+...+..+.|+ |||+.|+..+ .+
T Consensus 209 --------~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s----~d 276 (393)
T 4gq1_A 209 --------GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMC----KS 276 (393)
T ss_dssp --------SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEEC----TT
T ss_pred --------CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEe----CC
Confidence 246777777665322110000 00 012334455667776 8999777654 44
Q ss_pred EEEEEEECCCCceE-EEEEeccCceeecccccccCC----------CC-ccccCCe-EEEEeccCCceEEEEEeCCCcee
Q 004067 339 LKVLKFDIKTGQRK-VILVEELDSWVNLHDCFTPLD----------KG-VTKYSGG-FIWASEKTGFRHLYLHDINGTCL 405 (776)
Q Consensus 339 ~~l~~~d~~~g~~~-~l~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~-~~~~s~~~g~~~l~~~~~~g~~~ 405 (776)
..+.+||+.++... .+..+....+.. .+.+.. .. .....++ ++.....+| .|++||...++.
T Consensus 277 ~~i~vwd~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg--~V~lwd~~~~~~ 351 (393)
T 4gq1_A 277 GAWLRWNLFANNDYNEISDSTMKLGPK---NLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG--LIQLINTYEKDS 351 (393)
T ss_dssp SEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT--EEEEEETTCTTC
T ss_pred CCEEEEECccCCCCceEeeecCccccE---EEccccccccccCcceeEEEccCCCCEEEEEECCCC--EEEEEECCCCcE
Confidence 56889999876543 222221111100 011100 00 0111233 444445567 899999876643
Q ss_pred -eccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEE
Q 004067 406 -GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 445 (776)
Q Consensus 406 -~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~ 445 (776)
..+..+...|..+. |||||++|+..+ .++ ..||++
T Consensus 352 ~~~~~~~~~~V~sva-fspdG~~LA~as-~~G---v~lvrL 387 (393)
T 4gq1_A 352 NSIPIQLGMPIVDFC-WHQDGSHLAIAT-EGS---VLLTRL 387 (393)
T ss_dssp CEEEEECSSCEEEEE-ECTTSSEEEEEE-SSE---EEEEEE
T ss_pred EEEecCCCCcEEEEE-EcCCCCEEEEEe-CCC---eEEEEE
Confidence 44455555677765 999999877664 332 455554
No 405
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.99 E-value=6.2e-10 Score=118.99 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=80.7
Q ss_pred CCceEEEEEcCCCCcccccccccccchh-hhHHHHhC-CcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRSK-GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 629 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l 629 (776)
...|+||++||..++.. ..| .. ++..|.+. ||.|+++|+||+|.+.......... ...+|+.+.++++
T Consensus 68 ~~~p~vvliHG~~~~~~--~~w----~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~----~~~~dl~~~i~~L 137 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGE--DSW----PSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIR----IVGAETAYLIQQL 137 (452)
T ss_dssp TTSCEEEEECCTTCCSS--SSH----HHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCC--chH----HHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHH----HHHHHHHHHHHHH
Confidence 34589999999766531 123 22 34556554 9999999999998875321111111 1256778888888
Q ss_pred HHcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 630 IKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 630 ~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
.++..++.+++.|+||||||++|+.++.++|++++++++++|..
T Consensus 138 ~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 138 LTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp HHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 75534457899999999999999999999999999999887754
No 406
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.99 E-value=3.5e-07 Score=94.28 Aligned_cols=233 Identities=12% Similarity=0.084 Sum_probs=129.7
Q ss_pred CceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE--CCcEEEEecCCCceeEEeeCCCCCc
Q 004067 138 KKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR--DCELHVLNLLINEQRQLTHGANGNT 213 (776)
Q Consensus 138 dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~~g~~~~lt~~~~~~~ 213 (776)
++.++++. .++.|.++|..+++....+... .....+.++||| ++.... ++.|+++|+++++.......+...
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~--~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~- 127 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGF--TSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMD- 127 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECC--SSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCC-
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCC--CCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCcc-
Confidence 44455554 4578999999998875355432 236678899998 543333 357999999999875432222100
Q ss_pred eecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 214 VTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
+. ......+++ ++++|+...... ...|.++|++
T Consensus 128 ---~~--------~~~p~~i~~--~~~~lyv~~~~~----------------------------------~~~v~viD~~ 160 (328)
T 3dsm_A 128 ---ME--------SGSTEQMVQ--YGKYVYVNCWSY----------------------------------QNRILKIDTE 160 (328)
T ss_dssp ---TT--------TCBCCCEEE--ETTEEEEEECTT----------------------------------CCEEEEEETT
T ss_pred ---cc--------CCCcceEEE--ECCEEEEEcCCC----------------------------------CCEEEEEECC
Confidence 00 000235556 566665543100 1358999999
Q ss_pred CCceEE-EEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecC-------ceEEEEEEECCCCceEEEEEeccCceeec
Q 004067 294 GGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ-------TKLKVLKFDIKTGQRKVILVEELDSWVNL 365 (776)
Q Consensus 294 ~~~~~~-l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-------~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 365 (776)
+++... +... .....+.++|||+++ +...... ....|+++|+++++......-....+
T Consensus 161 t~~~~~~i~~g----------~~p~~i~~~~dG~l~-v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~--- 226 (328)
T 3dsm_A 161 TDKVVDELTIG----------IQPTSLVMDKYNKMW-TITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDW--- 226 (328)
T ss_dssp TTEEEEEEECS----------SCBCCCEECTTSEEE-EEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCC---
T ss_pred CCeEEEEEEcC----------CCccceEEcCCCCEE-EEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCC---
Confidence 887543 3321 122357889999843 3332210 02579999999987654332111100
Q ss_pred ccccccCCCCcccc-CCeEEEEeccCCceEEEEEeCCCceee--c-cccCCeEEEEEEeecCCCcEEEEEEccCCCceee
Q 004067 366 HDCFTPLDKGVTKY-SGGFIWASEKTGFRHLYLHDINGTCLG--P-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 441 (776)
Q Consensus 366 ~~~~~~~~~~~~~~-~~~~~~~s~~~g~~~l~~~~~~g~~~~--~-lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~ 441 (776)
+..++.+ +++.+|+++. .|+++|+++++.. . ++.+......+ .++|+++.||+....+-.....
T Consensus 227 -------p~~la~~~d~~~lyv~~~----~v~~~d~~t~~~~~~~~~~~~~~~p~gi-~vdp~~g~lyva~~~~y~~~~~ 294 (328)
T 3dsm_A 227 -------PSEVQLNGTRDTLYWINN----DIWRMPVEADRVPVRPFLEFRDTKYYGL-TVNPNNGEVYVADAIDYQQQGI 294 (328)
T ss_dssp -------CEEEEECTTSCEEEEESS----SEEEEETTCSSCCSSCSBCCCSSCEEEE-EECTTTCCEEEEECTTSSSEEE
T ss_pred -------ceeEEEecCCCEEEEEcc----EEEEEECCCCceeeeeeecCCCCceEEE-EEcCCCCeEEEEcccccccCCE
Confidence 1112333 2445666654 7999999887643 2 22111223343 4888777778876211111246
Q ss_pred EEEEEe
Q 004067 442 LYCAKL 447 (776)
Q Consensus 442 l~~~~~ 447 (776)
|+.++.
T Consensus 295 V~v~d~ 300 (328)
T 3dsm_A 295 VYRYSP 300 (328)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 777776
No 407
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.98 E-value=4e-08 Score=100.36 Aligned_cols=204 Identities=10% Similarity=0.055 Sum_probs=124.3
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..|.|+|||+.|+|..... ..|++++.+ ++.+.+... ........+++
T Consensus 47 ~egp~~~~~g~~l~~~d~~~----~~i~~~~~~-g~~~~~~~~------------------------~~~~~gl~~d~-- 95 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVG----RRVLGWRED-GTVDVLLDA------------------------TAFTNGNAVDA-- 95 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTT----TEEEEEETT-SCEEEEEES------------------------CSCEEEEEECT--
T ss_pred ccCCeEeCCCCEEEEEECCC----CEEEEEeCC-CCEEEEeCC------------------------CCccceeeECC--
Confidence 46899999999999987654 469999985 555544431 12466788999
Q ss_pred CCceEEEEeC-CCcEEEEeCCCCccceecCCC-C---CCCccCceeCCCCCEEEEEE-------------------CCcE
Q 004067 137 SKKKIIMVPL-PDGIYFQDLSCSKPELKLSSS-S---CSPVIDPHLSSDGTMIAFVR-------------------DCEL 192 (776)
Q Consensus 137 ~dg~~l~~~~-~~~l~~~d~~~~~~~~~l~~~-~---~~~~~~~~~SpDg~~la~~~-------------------~~~l 192 (776)
||+.++... ...|++++.+ ++.+ .+... . ......+.++|||+. .++. ...|
T Consensus 96 -dG~l~v~~~~~~~v~~~~~~-g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l-~~td~~~g~~~~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 96 -QQRLVHCEHGRRAITRSDAD-GQAH-LLVGRYAGKRLNSPNDLIVARDGAI-WFTDPPFGLRKPSQGCPADPELAHHSV 171 (305)
T ss_dssp -TSCEEEEETTTTEEEEECTT-SCEE-EEECEETTEECSCCCCEEECTTSCE-EEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred -CCCEEEEECCCCEEEEECCC-CCEE-EEEeccCCCccCCCCCEEECCCCCE-EEeCcCCCccccccccccccccCCCeE
Confidence 999666554 3679999987 4444 33221 1 112456899999984 3321 1359
Q ss_pred EEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcce
Q 004067 193 HVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQED 272 (776)
Q Consensus 193 ~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (776)
|.++.++|+.+.+. ... ...+++|+|||+.|++.......
T Consensus 172 ~~~d~~~g~~~~~~-~~~------------------~p~gl~~spdg~~lyv~~~~~~~--------------------- 211 (305)
T 3dr2_A 172 YRLPPDGSPLQRMA-DLD------------------HPNGLAFSPDEQTLYVSQTPEQG--------------------- 211 (305)
T ss_dssp EEECSSSCCCEEEE-EES------------------SEEEEEECTTSSEEEEEECCC-----------------------
T ss_pred EEEcCCCCcEEEEe-cCC------------------CCcceEEcCCCCEEEEEecCCcC---------------------
Confidence 99999888887765 211 13368899999988765432100
Q ss_pred ecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE
Q 004067 273 HAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 352 (776)
Q Consensus 273 ~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~ 352 (776)
.....|++++++++.......-. .........+.+++||+ |+... . . .|++|++++....
T Consensus 212 ---------~~~~~i~~~~~~~~~l~~~~~~~-----~~~~~~pdgi~~d~~G~-lwv~~--~--~-gv~~~~~~g~~~~ 271 (305)
T 3dr2_A 212 ---------HGSVEITAFAWRDGALHDRRHFA-----SVPDGLPDGFCVDRGGW-LWSSS--G--T-GVCVFDSDGQLLG 271 (305)
T ss_dssp ----------CCCEEEEEEEETTEEEEEEEEE-----CCSSSCCCSEEECTTSC-EEECC--S--S-EEEEECTTSCEEE
T ss_pred ---------CCCCEEEEEEecCCCccCCeEEE-----ECCCCCCCeEEECCCCC-EEEec--C--C-cEEEECCCCCEEE
Confidence 00134777777655421111100 00112233578899998 33332 1 2 3999999655555
Q ss_pred EEE
Q 004067 353 VIL 355 (776)
Q Consensus 353 ~l~ 355 (776)
.+.
T Consensus 272 ~~~ 274 (305)
T 3dr2_A 272 HIP 274 (305)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 408
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=98.98 E-value=1e-09 Score=119.34 Aligned_cols=130 Identities=19% Similarity=0.239 Sum_probs=89.4
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCC-cEEEEECCC----CCCCCchhhhhhhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG-ILVWKLDNR----GTARRGLKFEASIK 611 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~d~r----g~g~~~~~~~~~~~ 611 (776)
+...+|.|... .+++|+||++|||+........+ ......|+++| ++|+.+||| |++.++..... ..
T Consensus 85 l~l~v~~P~~~---~~~~Pviv~iHGGg~~~g~~~~~----~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~-~~ 156 (498)
T 2ogt_A 85 LYLNIWSPAAD---GKKRPVLFWIHGGAFLFGSGSSP----WYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGE-AY 156 (498)
T ss_dssp CEEEEEESCSS---SCCEEEEEEECCSTTTSCCTTCG----GGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCG-GG
T ss_pred cEEEEEecCCC---CCCCcEEEEEcCCccCCCCCCCC----cCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccc-cc
Confidence 55667788632 25789999999987432211111 11245677665 999999999 66554431110 01
Q ss_pred hccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhC--CCceEEEEEcCCCCC
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTS 674 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~--~~~~~~~v~~~~~~~ 674 (776)
...+...+.|+..+++|+.++ ...|+++|.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 157 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 157 AQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 112234488999999999886 346899999999999999998888753 467999999998654
No 409
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.98 E-value=1e-07 Score=98.41 Aligned_cols=252 Identities=9% Similarity=0.026 Sum_probs=145.4
Q ss_pred CcCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCce-EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 54 YVAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQ-ELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 54 ~~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
|..+..+.+ |+.+++...... ..|.++|+++++. +++.. ......+.+
T Consensus 43 g~~~~~i~~--~~~~lyv~~~~~----~~v~viD~~t~~~~~~i~~-------------------------~~~p~~i~~ 91 (328)
T 3dsm_A 43 GDVAQSMVI--RDGIGWIVVNNS----HVIFAIDINTFKEVGRITG-------------------------FTSPRYIHF 91 (328)
T ss_dssp BSCEEEEEE--ETTEEEEEEGGG----TEEEEEETTTCCEEEEEEC-------------------------CSSEEEEEE
T ss_pred CccceEEEE--ECCEEEEEEcCC----CEEEEEECcccEEEEEcCC-------------------------CCCCcEEEE
Confidence 333455555 567776655432 5799999999887 44432 134667888
Q ss_pred eecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCC----CccCceeCCCCCEEEEEE---CCcEEEEecCCCcee
Q 004067 133 VKTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCS----PVIDPHLSSDGTMIAFVR---DCELHVLNLLINEQR 203 (776)
Q Consensus 133 sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~----~~~~~~~SpDg~~la~~~---~~~l~~~~l~~g~~~ 203 (776)
++ || +|+++ .++.|+++|+.+++....+..+... ....+.+ ++++|.... ++.|+++|+++++..
T Consensus 92 ~~---~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 92 LS---DE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EE---TT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred eC---CC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 89 99 46555 4788999999998866333322200 2344566 566655443 346999999998765
Q ss_pred EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCC
Q 004067 204 QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNV 283 (776)
Q Consensus 204 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 283 (776)
.....+.. ...++++|||+ +++......... .| . ..
T Consensus 166 ~~i~~g~~------------------p~~i~~~~dG~-l~v~~~~~~~~~--------------------~~--~---~~ 201 (328)
T 3dsm_A 166 DELTIGIQ------------------PTSLVMDKYNK-MWTITDGGYEGS--------------------PY--G---YE 201 (328)
T ss_dssp EEEECSSC------------------BCCCEECTTSE-EEEEBCCBCTTC--------------------SS--C---BC
T ss_pred EEEEcCCC------------------ccceEEcCCCC-EEEEECCCccCC--------------------cc--c---cC
Confidence 43332211 23577999997 555442110000 00 0 01
Q ss_pred eEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCce
Q 004067 284 KVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 362 (776)
Q Consensus 284 ~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 362 (776)
...|+++|.++++.. .+..+ .......++|+|||+.+++.. . .|+++|+++++.... .+
T Consensus 202 ~~~v~~id~~t~~v~~~~~~~--------~g~~p~~la~~~d~~~lyv~~-~-----~v~~~d~~t~~~~~~------~~ 261 (328)
T 3dsm_A 202 APSLYRIDAETFTVEKQFKFK--------LGDWPSEVQLNGTRDTLYWIN-N-----DIWRMPVEADRVPVR------PF 261 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECC--------TTCCCEEEEECTTSCEEEEES-S-----SEEEEETTCSSCCSS------CS
T ss_pred CceEEEEECCCCeEEEEEecC--------CCCCceeEEEecCCCEEEEEc-c-----EEEEEECCCCceeee------ee
Confidence 246899999998865 34332 122466799999999776653 2 699999998875210 01
Q ss_pred eecccccccCCCCccccC-CeEEEEecc---CCceEEEEEeCCCceeeccc
Q 004067 363 VNLHDCFTPLDKGVTKYS-GGFIWASEK---TGFRHLYLHDINGTCLGPIT 409 (776)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~---~g~~~l~~~~~~g~~~~~lt 409 (776)
.... ...+.++..++ ++.+|+++. .+...|++++++|.....+.
T Consensus 262 ~~~~---~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~ 309 (328)
T 3dsm_A 262 LEFR---DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFY 309 (328)
T ss_dssp BCCC---SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEE
T ss_pred ecCC---CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEE
Confidence 0000 00111223333 344455541 22347888888865555554
No 410
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.97 E-value=2.1e-10 Score=112.12 Aligned_cols=185 Identities=14% Similarity=0.051 Sum_probs=107.9
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHcC
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 633 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 633 (776)
.+.|+++||.+++.. .|..++..|.+ |.|+.+|++|++.. ..++.+.++.+.
T Consensus 17 ~~~l~~~hg~~~~~~-------~~~~~~~~l~~--~~v~~~d~~g~~~~----------------~~~~~~~i~~~~--- 68 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGL-------MYQNLSSRLPS--YKLCAFDFIEEEDR----------------LDRYADLIQKLQ--- 68 (230)
T ss_dssp SEEEEEECCTTCCGG-------GGHHHHHHCTT--EEEEEECCCCSTTH----------------HHHHHHHHHHHC---
T ss_pred CCCEEEECCCCCchH-------HHHHHHHhcCC--CeEEEecCCCHHHH----------------HHHHHHHHHHhC---
Confidence 378999999776543 34445666654 99999999986521 335555554441
Q ss_pred CCCCCcEEEEeechHHHHHHHHHhhC---CCceEEEEEcCCCCCcc--ccc-----ccccccccCCCCCC----c---cc
Q 004067 634 LAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWD--GYD-----TFYTEKYMGLPSED----P---VG 696 (776)
Q Consensus 634 ~id~~~i~l~G~S~GG~~a~~~a~~~---~~~~~~~v~~~~~~~~~--~~~-----~~~~~~~~~~~~~~----~---~~ 696 (776)
...++.++||||||.+++.++.+. ++.+..+++.++..... .+. ..........+... . ..
T Consensus 69 --~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (230)
T 1jmk_C 69 --PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHG 146 (230)
T ss_dssp --CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHH
T ss_pred --CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHH
Confidence 135799999999999999998764 35678887776543210 000 00000000000000 0 00
Q ss_pred hh-------cCCh-hhhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCC--CCCCCCcHHHHHH
Q 004067 697 YE-------YSSV-MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH--MPRRHRDRIYMEE 766 (776)
Q Consensus 697 ~~-------~~~~-~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H--~~~~~~~~~~~~~ 766 (776)
+. .... .....++++|+++++|+.|..++. ....+.+ ....+++++.+++ +| .+ ..+....+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~---~~~~~~~~~~i~g-~H~~~~-~~~~~~~~~~ 220 (230)
T 1jmk_C 147 LKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WLASWEE---ATTGAYRMKRGFG-THAEML-QGETLDRNAG 220 (230)
T ss_dssp HHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TEECSGG---GBSSCEEEEECSS-CGGGTT-SHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCcc-ccchHHH---hcCCCeEEEEecC-ChHHHc-CcHhHHHHHH
Confidence 00 0000 012356789999999999998762 1111111 1234688999997 88 54 4455677778
Q ss_pred HHHHHHHH
Q 004067 767 RIWEFIER 774 (776)
Q Consensus 767 ~~~~fl~~ 774 (776)
.+.+||.+
T Consensus 221 ~i~~~l~~ 228 (230)
T 1jmk_C 221 ILLEFLNT 228 (230)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 88888754
No 411
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.96 E-value=2.5e-07 Score=99.78 Aligned_cols=273 Identities=11% Similarity=0.025 Sum_probs=159.8
Q ss_pred EEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeC
Q 004067 131 EWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHG 208 (776)
Q Consensus 131 ~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~ 208 (776)
.+++ ||+.|+.. .++.|.+||+.+++....+..... .+..+.| |++.|+..+. +.|.+|++.+++.......
T Consensus 138 ~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 211 (435)
T 1p22_A 138 CLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG-SVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH 211 (435)
T ss_dssp EEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSS-CEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC
T ss_pred EEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCC-cEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC
Confidence 5667 88888876 788999999999887744544333 3655555 8888888775 5799999999876543322
Q ss_pred CCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEE
Q 004067 209 ANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 288 (776)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~ 288 (776)
... .+..+.|++ +.|+..+.+ ..|.
T Consensus 212 h~~-----------------~v~~l~~~~--~~l~s~s~d------------------------------------g~i~ 236 (435)
T 1p22_A 212 HCE-----------------AVLHLRFNN--GMMVTCSKD------------------------------------RSIA 236 (435)
T ss_dssp CCS-----------------CEEEEECCT--TEEEEEETT------------------------------------SCEE
T ss_pred CCC-----------------cEEEEEEcC--CEEEEeeCC------------------------------------CcEE
Confidence 211 134566764 466655432 2478
Q ss_pred EEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccc
Q 004067 289 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDC 368 (776)
Q Consensus 289 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 368 (776)
+||+.+++....... ...+...+..+.| |++.++..+ .+..|.+||+.+++...........-..
T Consensus 237 vwd~~~~~~~~~~~~-----~~~~~~~v~~~~~--~~~~l~s~~----~dg~i~vwd~~~~~~~~~~~~~~~~v~~---- 301 (435)
T 1p22_A 237 VWDMASPTDITLRRV-----LVGHRAAVNVVDF--DDKYIVSAS----GDRTIKVWNTSTCEFVRTLNGHKRGIAC---- 301 (435)
T ss_dssp EEECSSSSCCEEEEE-----ECCCSSCEEEEEE--ETTEEEEEE----TTSEEEEEETTTCCEEEEEECCSSCEEE----
T ss_pred EEeCCCCCCceeeeE-----ecCCCCcEEEEEe--CCCEEEEEe----CCCeEEEEECCcCcEEEEEcCCCCcEEE----
Confidence 999988764321110 1455667788888 777777665 4567999999998765444322211000
Q ss_pred cccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 369 FTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
+.+ ++.++++...+| .|.+||+.+++ ...+..+...+..+. + +++.++..+ .++. +.+|.+..
T Consensus 302 -------~~~-~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~-~--~~~~l~sg~-~dg~--i~vwd~~~ 365 (435)
T 1p22_A 302 -------LQY-RDRLVVSGSSDN--TIRLWDIECGACLRVLEGHEELVRCIR-F--DNKRIVSGA-YDGK--IKVWDLVA 365 (435)
T ss_dssp -------EEE-ETTEEEEEETTS--CEEEEETTTCCEEEEECCCSSCEEEEE-C--CSSEEEEEE-TTSC--EEEEEHHH
T ss_pred -------EEe-CCCEEEEEeCCC--eEEEEECCCCCEEEEEeCCcCcEEEEE-e--cCCEEEEEe-CCCc--EEEEECCC
Confidence 122 234566666667 89999988665 455555555555543 4 777655444 4433 78887753
Q ss_pred CCCCCCc--cccceeecCCCC-eEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCc
Q 004067 448 YPDWNHT--LEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 501 (776)
Q Consensus 448 ~~~g~~~--~~~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~ 501 (776)
....... ......+..+.+ +..++| |++.|+.... + ..|.++++.++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~--D--g~i~iwd~~~~~ 416 (435)
T 1p22_A 366 ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSH--D--DTILIWDFLNDP 416 (435)
T ss_dssp HTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCS--S--SEEEEEC-----
T ss_pred CCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeC--C--CEEEEEECCCCC
Confidence 1100000 002333444332 445566 7777654432 2 469999886654
No 412
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=98.95 E-value=6.6e-10 Score=122.11 Aligned_cols=126 Identities=20% Similarity=0.321 Sum_probs=88.0
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCC-C---CCCCchhhhhhhhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR-G---TARRGLKFEASIKH 612 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r-g---~g~~~~~~~~~~~~ 612 (776)
+...+|.|.... ..+++|+||++|||+........| .. ...+...|++|+.+||| | +...+. ..
T Consensus 99 l~lnv~~P~~~~-~~~~~Pv~v~iHGG~~~~g~~~~~----~~-~~la~~~g~vvv~~nYRlg~~gf~~~~~------~~ 166 (542)
T 2h7c_A 99 LYLNIYTPADLT-KKNRLPVMVWIHGGGLMVGAASTY----DG-LALAAHENVVVVTIQYRLGIWGFFSTGD------EH 166 (542)
T ss_dssp CEEEEEECSCTT-SCCCEEEEEEECCSTTTSCCSTTS----CC-HHHHHHHTCEEEEECCCCHHHHHCCCSS------TT
T ss_pred cEEEEEECCCCC-CCCCCCEEEEECCCcccCCCcccc----CH-HHHHhcCCEEEEecCCCCccccCCCCCc------cc
Confidence 556688887642 235789999999987543322222 11 22333589999999999 2 221111 01
Q ss_pred ccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhh--CCCceEEEEEcCCCCC
Q 004067 613 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTS 674 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~--~~~~~~~~v~~~~~~~ 674 (776)
..+...+.|+..+++|+.++ ...|+++|.|+|+|+||++++.++.. .+.+|+++|+.+|...
T Consensus 167 ~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 167 SRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 12233478999999999875 35799999999999999999998876 3678999999988654
No 413
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.95 E-value=5.8e-06 Score=92.36 Aligned_cols=371 Identities=12% Similarity=0.053 Sum_probs=192.3
Q ss_pred cCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 55 VAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 55 ~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
..|..+++.|.+.+|+|..-.. ...|++.+++|...+.+..... .......+++
T Consensus 127 ~~P~~Iavdp~~g~ly~tD~g~---~~~I~r~~~dG~~~~~l~~~~~-----------------------~~P~Glald~ 180 (619)
T 3s94_A 127 DQPRAIALDPSSGFMYWTDWGE---VPKIERAGMDGSSRFIIINSEI-----------------------YWPNGLTLDY 180 (619)
T ss_dssp SCCCCEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEEEECSSC-----------------------SSEEEEEEET
T ss_pred CCCceEEEecCCCeEEEeccCC---CCEEEEEECCCCceEEEEeCCC-----------------------CCCcEEEEEc
Confidence 4478999999988898876432 3579999999888777764211 2345788898
Q ss_pred cCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC---CcEEEEecCCCceeEEeeCC
Q 004067 135 TSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD---CELHVLNLLINEQRQLTHGA 209 (776)
Q Consensus 135 ~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~---~~l~~~~l~~g~~~~lt~~~ 209 (776)
++++|+++ ....|+.+|++|...+ .+..........+++..| .| |.++ +.|++++..+|+........
T Consensus 181 ---~~~~LY~aD~~~~~I~~~~~dG~~~~-~~~~~~~~~P~gi~~~~~--~l-y~td~~~~~V~~~d~~tg~~~~~i~~~ 253 (619)
T 3s94_A 181 ---EEQKLYWADAKLNFIHKSNLDGTNRQ-AVVKGSLPHPFALTLFED--IL-YWTDWSTHSILACNKYTGEGLREIHSD 253 (619)
T ss_dssp ---TTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS--EE-EEECTTTCSEEEEESSSCCCCEECCSC
T ss_pred ---cCCEEEEEeCCCCeEEEecCCCCccE-EEEeCCCCCceEEEEeCC--EE-EEecCCCCEEEEEECCCCcccEEEecC
Confidence 99999988 4567999999998776 443322112334455444 44 5544 46999999888654433222
Q ss_pred CCCceecCCcccceecccCCcceEEECCC------CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC--
Q 004067 210 NGNTVTHGLAEYIAQEEMDRKTGYWWSLD------SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS-- 281 (776)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~wspD------g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-- 281 (776)
... ..++.-+.. ..... ..+|= -..|...+.... .+.-....+- ....+.+-...+..
T Consensus 254 ~~~--p~~i~v~~~--~~qp~---~~n~C~~~ng~Cs~lCl~~~~~~---~~~C~C~~g~----~l~~d~~~C~~~~~~~ 319 (619)
T 3s94_A 254 IFS--PMDIHAFSQ--QRQPN---ATNPCGIDNGGCSHLCLMSPVKP---FYQCACPTGV----KLLENGKTCKDGATEL 319 (619)
T ss_dssp CCC--CSEEEECCG--GGSCC---CCCTTTTTGGGCSSEEEECSSTT---SEEEECCTTC----CBCTTSSCBCSSCSEE
T ss_pred CCC--CcEEEEEcc--ccCCC---ccccccCCCCcccceEECCCCCC---CceEeCCchh----eecccCcccCCCCceE
Confidence 110 000000000 00000 00000 011222111000 0000000000 00000000000000
Q ss_pred ---CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEec
Q 004067 282 ---NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE 358 (776)
Q Consensus 282 ---~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 358 (776)
..+..|..++++++....+.++ .........+.|.+.+..|+++.. ....|++++++++..+.+....
T Consensus 320 Ll~~~~~~i~~i~l~~~~~~~~~~~------~~~l~~~~~ld~d~~~~~ly~sD~---~~~~I~r~~~~g~~~~~v~~~~ 390 (619)
T 3s94_A 320 LLLARRTDLRRISLDTPDFTDIVLQ------LEDIRHAIAIDYDPVEGYIYWTDD---EVRAIRRSFIDGSGSQFVVTAQ 390 (619)
T ss_dssp EEEEESSCEEEEESSSTTCCCEECC------CSCCSSEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSS
T ss_pred EEEEcccceEEEecCCCccceeEEe------ccccCccEEEEEEcCCCeEEEEeC---CCCeEEEEEcCCCccEEEEECC
Confidence 0001233334443322211111 122234567889886556666542 2346999999887666654321
Q ss_pred cCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCe-EEEEEEeecCCCcEEEEEEccCCC
Q 004067 359 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGP 437 (776)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~-~~~~~~~~s~dg~~i~~~~~~~~~ 437 (776)
. -.|.+-.+.|.++.+||+.... ..|.+.+++|+..+.|..... ....+ +++|....||++.....
T Consensus 391 ~---------~~p~GlAvD~~~~~lY~tD~~~--~~I~v~~~~G~~~~~l~~~~l~~P~~i-avdp~~G~ly~tD~g~~- 457 (619)
T 3s94_A 391 I---------AHPDGIAVDWVARNLYWTDTGT--DRIEVTRLNGTMRKILISEDLEEPRAI-VLDPMVGYMYWTDWGEI- 457 (619)
T ss_dssp C---------SCCCEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECTTCCSEEEE-EEETTTTEEEEEECSSS-
T ss_pred C---------CCcCceEEecccCcEEEEeCCC--CcEEEEeCCCCeEEEEEECCCCCeeeE-EEEcCCCcEEEecCCCC-
Confidence 1 0121111233456677765434 489999999887666654332 23344 48887777999876543
Q ss_pred ceeeEEEEEeCCCCCCccccceeecCC--CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCceeEee
Q 004067 438 LESHLYCAKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 506 (776)
Q Consensus 438 ~~~~l~~~~~~~~g~~~~~~~~~l~~~--~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~l 506 (776)
..|++.++ +|+ ..+.|... .....+++++++++|.++-... ..|++++.. |...+.+
T Consensus 458 --~~I~r~~~--dG~----~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~---~~I~~~~~d-G~~~~~~ 516 (619)
T 3s94_A 458 --PKIERAAL--DGS----DRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT---DKIEVMNTD-GTGRRVL 516 (619)
T ss_dssp --CEEEEEET--TSC----SCEEEECSSCSCEEEEEEETTTTEEEEEETTT---TEEEEEESS-SCCCEEE
T ss_pred --CEEEEEcc--CCC----ccEEEEeCCCCCCeeeEEcccCCEEEEEECCC---CEEEEEecC-CCceEEE
Confidence 47999998 675 33334332 2356889999998888775443 379999884 4433434
No 414
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.93 E-value=3.5e-09 Score=107.88 Aligned_cols=109 Identities=17% Similarity=0.100 Sum_probs=78.9
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
++.|+||++||..+....... ...|..+++.|.++||.|+++|+||+|.+.... ...+++.+.++.+++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~-~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~----------~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGV-LEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN----------GRGEQLLAYVKTVLA 74 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTT-EESSTTHHHHHHHTTCCEEECCCCSSCCSSSTT----------SHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccch-HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC----------CCHHHHHHHHHHHHH
Confidence 345789999997665421100 024555788999999999999999998774321 124455555555544
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
.. +.+++.|+||||||.++..++.++|++++++|.+++..
T Consensus 75 ~~--~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 75 AT--GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp HH--CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred Hh--CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 32 34689999999999999999999999999999988754
No 415
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.91 E-value=1.4e-09 Score=111.95 Aligned_cols=197 Identities=12% Similarity=0.047 Sum_probs=109.9
Q ss_pred EEEEEcC--CCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCc----hhhhhhhhhccCCccHHHHHHHHHHH
Q 004067 556 TLISVYG--GPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG----LKFEASIKHNCGRIDAEDQLTGAEWL 629 (776)
Q Consensus 556 ~vl~~HG--~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~----~~~~~~~~~~~~~~~~~D~~~~i~~l 629 (776)
.|+++|| +++... .|..++..|. .++.|+.+|+||+|.+. ....... . ...+++.+.++.+
T Consensus 91 ~l~~~hg~g~~~~~~-------~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~-~----~~a~~~~~~i~~~ 157 (319)
T 2hfk_A 91 VLVGCTGTAANGGPH-------EFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADL-D----TALDAQARAILRA 157 (319)
T ss_dssp EEEEECCCCTTCSTT-------TTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSH-H----HHHHHHHHHHHHH
T ss_pred cEEEeCCCCCCCcHH-------HHHHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCH-H----HHHHHHHHHHHHh
Confidence 7899997 333322 2334455554 68999999999998751 1110000 0 0123333333332
Q ss_pred HHcCCCCCCcEEEEeechHHHHHHHHHhhC----CCceEEEEEcCCCCCccc--cccc---cccccc---CCCCCCc---
Q 004067 630 IKQGLAKVGHIGLYGWSYGGYLSAITLARF----PDVFQCAVSGAPVTSWDG--YDTF---YTEKYM---GLPSEDP--- 694 (776)
Q Consensus 630 ~~~~~id~~~i~l~G~S~GG~~a~~~a~~~----~~~~~~~v~~~~~~~~~~--~~~~---~~~~~~---~~~~~~~--- 694 (776)
. ...++.++||||||.+|..+|.+. ++.+..+++.++...... .... ..+..+ ..+....
T Consensus 158 ~-----~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 232 (319)
T 2hfk_A 158 A-----GDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLL 232 (319)
T ss_dssp H-----TTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHH
T ss_pred c-----CCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHH
Confidence 1 235799999999999999999875 456888888776532110 0000 000000 0000000
Q ss_pred --cchhcCChhhhhccCCCcEEEEecCCCCccChHH-HHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcHHHHHHHHHHH
Q 004067 695 --VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEF 771 (776)
Q Consensus 695 --~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 771 (776)
..|...-.......+++|+++++| .|..+++.. ...+.+. ....++++.++ ++|.....+....+.+.+.+|
T Consensus 233 ~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~---~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~ 307 (319)
T 2hfk_A 233 AMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAH---WDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSW 307 (319)
T ss_dssp HHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCC---CSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCCccccccchhhc---CCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHH
Confidence 000000000113567899999999 998887654 2222111 12357889998 589742324788899999999
Q ss_pred HHHh
Q 004067 772 IERT 775 (776)
Q Consensus 772 l~~~ 775 (776)
|.+.
T Consensus 308 L~~~ 311 (319)
T 2hfk_A 308 LDAI 311 (319)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9753
No 416
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.90 E-value=6.1e-08 Score=102.97 Aligned_cols=114 Identities=12% Similarity=0.059 Sum_probs=73.8
Q ss_pred CCceeEcC--------CCCEEEEEeCCCCcCcceEEEEecCCCce-EEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCe
Q 004067 57 PTSIGFSP--------DDNLITYLLSPDHSLSRKVFSFDPKTCKQ-ELVFSPPDGGLDENNISPEEKLRRERLRERGLGV 127 (776)
Q Consensus 57 ~~~~~~Sp--------DG~~ia~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 127 (776)
+..++||| ||+.||-.+.+ ..|.+||+.++.. ..+..+ ...+
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D-----~tv~~Wd~~~~~~~~~~~~~------------------------~~~v 189 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDD-----CTLIIWRLTDEGPILAGYPL------------------------SSPG 189 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETT-----SEEEEEEEETTEEEEEEEEC------------------------SSCE
T ss_pred eEEEEEccccccccCCCCCEEEEEECC-----CeEEEEECCCCceeeeecCC------------------------CCCc
Confidence 68899998 99999966653 4799999977654 344432 2367
Q ss_pred eeEEEeecCCCceE-EEEe-CCCcEEEEeCCCCccceecCC------------------------CCCCCccCceeC-CC
Q 004067 128 TRYEWVKTSSKKKI-IMVP-LPDGIYFQDLSCSKPELKLSS------------------------SSCSPVIDPHLS-SD 180 (776)
Q Consensus 128 ~~~~~sp~~~dg~~-l~~~-~~~~l~~~d~~~~~~~~~l~~------------------------~~~~~~~~~~~S-pD 180 (776)
.+..|+| ++.. |+.. .++.|.+||+.+++....+.. .....+....|+ ||
T Consensus 190 ~~v~~~p---~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~d 266 (393)
T 4gq1_A 190 ISVQFRP---SNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSD 266 (393)
T ss_dssp EEEEEET---TEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTT
T ss_pred EEEEECC---CCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCC
Confidence 8899999 9875 4443 788999999988764311110 111123445665 89
Q ss_pred CCEEEEEEC-CcEEEEecCCCce
Q 004067 181 GTMIAFVRD-CELHVLNLLINEQ 202 (776)
Q Consensus 181 g~~la~~~~-~~l~~~~l~~g~~ 202 (776)
|+.|+-... +.+.+|++.++..
T Consensus 267 g~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 267 GSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp TCEEEEECTTSEEEEEEC-----
T ss_pred CCEEEEEeCCCCEEEEECccCCC
Confidence 999887765 4689999987754
No 417
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.89 E-value=3.1e-09 Score=107.01 Aligned_cols=105 Identities=17% Similarity=0.117 Sum_probs=75.9
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
++.|+||++||..+...... ...|..+++.|.++||.|+++|+||+|.+.. ..+++.+.++.+++
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~--~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~-------------~~~~~~~~i~~~~~ 69 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILG--VDYWFGIPSALRRDGAQVYVTEVSQLDTSEV-------------RGEQLLQQVEEIVA 69 (285)
T ss_dssp CCSSCEEEECCTTCCSEETT--EESSTTHHHHHHHTTCCEEEECCCSSSCHHH-------------HHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccc--cccHHHHHHHHHhCCCEEEEEeCCCCCCchh-------------hHHHHHHHHHHHHH
Confidence 34578999999766532100 1134556888999999999999999876531 13344444444444
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
.. +.+++.++||||||.++..++.++|+.++++|.+++..
T Consensus 70 ~~--~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 70 LS--GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp HH--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred Hh--CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 32 34689999999999999999999999999999988753
No 418
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.88 E-value=2.3e-09 Score=110.75 Aligned_cols=195 Identities=12% Similarity=0.033 Sum_probs=112.3
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHH-HHHHHHc
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTG-AEWLIKQ 632 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~-i~~l~~~ 632 (776)
.|.|+++||.+++.. .|..++..| ..+|.|+++|++|+|.+... ...++++... ++.+.+.
T Consensus 101 ~~~l~~lhg~~~~~~-------~~~~l~~~L-~~~~~v~~~d~~g~~~~~~~----------~~~~~~~a~~~~~~i~~~ 162 (329)
T 3tej_A 101 GPTLFCFHPASGFAW-------QFSVLSRYL-DPQWSIIGIQSPRPNGPMQT----------AANLDEVCEAHLATLLEQ 162 (329)
T ss_dssp SCEEEEECCTTSCCG-------GGGGGGGTS-CTTCEEEEECCCTTTSHHHH----------CSSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCcccch-------HHHHHHHhc-CCCCeEEEeeCCCCCCCCCC----------CCCHHHHHHHHHHHHHHh
Confidence 378999999776543 233445555 46899999999998754211 0123344333 3333332
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhh---CCCceEEEEEcCCCCCccc-ccc--------cc-------ccccc-C-CCC
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAPVTSWDG-YDT--------FY-------TEKYM-G-LPS 691 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~---~~~~~~~~v~~~~~~~~~~-~~~--------~~-------~~~~~-~-~~~ 691 (776)
. ...++.++||||||.++..+|.+ +++.+..+++..+...... +.. .. ...+. . ...
T Consensus 163 ~--~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (329)
T 3tej_A 163 Q--PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS 240 (329)
T ss_dssp C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCC
T ss_pred C--CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhcccc
Confidence 2 23589999999999999999998 8999999998877654211 000 00 00000 0 000
Q ss_pred CCccchh-------cC-Chh--hhhccCCCcEEEEecCCCCccChHHHHHHHHHHHHCCCCeEEEEecCCCCCC-CCCCc
Q 004067 692 EDPVGYE-------YS-SVM--HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP-RRHRD 760 (776)
Q Consensus 692 ~~~~~~~-------~~-~~~--~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~-~~~~~ 760 (776)
.....+. .. ..+ .....+.+|++++.|..|..++......+.+ .-.+++++.++ ++|.. .....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~----~~~~~~~~~v~-g~H~~~~~~~~ 315 (329)
T 3tej_A 241 TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSP----WIAELDIYRQD-CAHVDIISPGT 315 (329)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTT----TEEEEEEEEES-SCGGGGGSTTT
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHH----hcCCcEEEEec-CChHHhCCChH
Confidence 0000000 00 000 0123456799999999998776543333222 22468888898 57763 33344
Q ss_pred HHHHHHHHHHHHH
Q 004067 761 RIYMEERIWEFIE 773 (776)
Q Consensus 761 ~~~~~~~~~~fl~ 773 (776)
...+...+.+||.
T Consensus 316 ~~~ia~~l~~~L~ 328 (329)
T 3tej_A 316 FEKIGPIIRATLN 328 (329)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 5666777777763
No 419
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.88 E-value=2.6e-09 Score=116.89 Aligned_cols=133 Identities=14% Similarity=0.141 Sum_probs=86.4
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHH-HhCCcEEEEECCCCCC-CCchhhhhhhhhcc
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL-RSKGILVWKLDNRGTA-RRGLKFEASIKHNC 614 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rg~g-~~~~~~~~~~~~~~ 614 (776)
+...+|.|... ...+++|+||++|||+........+... ......+ ...|++|+.+|||... ++.. .........
T Consensus 98 l~l~v~~P~~~-~~~~~~Pv~v~iHGGg~~~g~~~~~~~~-~l~~~~~~~~~~~vvv~~nYRl~~~gf~~-~~~~~~~~~ 174 (534)
T 1llf_A 98 LTINVVRPPGT-KAGANLPVMLWIFGGGFEIGSPTIFPPA-QMVTKSVLMGKPIIHVAVNYRVASWGFLA-GDDIKAEGS 174 (534)
T ss_dssp CEEEEEECTTC-CTTCCEEEEEEECCSTTTSCCGGGSCCH-HHHHHHHHTTCCCEEEEECCCCHHHHHCC-SHHHHHHTC
T ss_pred eEEEEEECCCC-CCCCCceEEEEEeCCCcccCCCcccCch-HHHHHHHhcCCCEEEEEeCCCCCCCCCCC-cccccccCC
Confidence 66778888753 1235789999999987543322222110 1111222 2469999999999531 0000 000011123
Q ss_pred CCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhC--------CCceEEEEEcCCC
Q 004067 615 GRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPV 672 (776)
Q Consensus 615 ~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~--------~~~~~~~v~~~~~ 672 (776)
+...+.|+..+++|+.++ ...|+++|.|+|+|+||++++.++... +.+|+++|+.+|.
T Consensus 175 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred CchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 344588999999999875 346999999999999999888777653 5578999998874
No 420
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.87 E-value=2.4e-09 Score=109.35 Aligned_cols=114 Identities=11% Similarity=0.011 Sum_probs=79.0
Q ss_pred ceEEEEEcCCCCccc-------ccccccccchhhhHHHHhCCcE---EEEECCCCCCCCchhhhhhhhhccCCccHHHHH
Q 004067 554 YKTLISVYGGPCVQL-------VCDSWINTVDMRAQYLRSKGIL---VWKLDNRGTARRGLKFEASIKHNCGRIDAEDQL 623 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~-------~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~ 623 (776)
.+.||++||..+... ....|......++..|.++||. |+++|++|+|.+..... ........+++.
T Consensus 40 ~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~----~~~~~~~~~~l~ 115 (342)
T 2x5x_A 40 KTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQY----NYHSSTKYAIIK 115 (342)
T ss_dssp SCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGG----CCBCHHHHHHHH
T ss_pred CCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccc----cCCHHHHHHHHH
Confidence 345888999766432 0112210014568889999998 99999998875432110 001112366778
Q ss_pred HHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhC--CCceEEEEEcCCCC
Q 004067 624 TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 673 (776)
Q Consensus 624 ~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~--~~~~~~~v~~~~~~ 673 (776)
+.++.++++. ..+++.|+||||||.++..++.++ |++++++|+++|..
T Consensus 116 ~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 116 TFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 8888777653 336899999999999999999988 88999999988754
No 421
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.87 E-value=5.5e-08 Score=100.75 Aligned_cols=272 Identities=10% Similarity=0.007 Sum_probs=147.2
Q ss_pred cEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE-----------CCcEEEEecCCCceeE-EeeCCCCCceec
Q 004067 149 GIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR-----------DCELHVLNLLINEQRQ-LTHGANGNTVTH 216 (776)
Q Consensus 149 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~-----------~~~l~~~~l~~g~~~~-lt~~~~~~~~~~ 216 (776)
.|+++|.++++....+..+.. . .+.+||||+++.... ++.|.++|+.+++... +...+.. +...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~--P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~-~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL--S-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP-RFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT--C-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC-SCCB
T ss_pred eEEEEECCCCeEEEEEeCCCC--C-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc-cccc
Confidence 789999999988755544432 3 699999999877664 2469999999987643 3222110 0000
Q ss_pred CCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEE--EEcCC
Q 004067 217 GLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV--VSAAG 294 (776)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~--~d~~~ 294 (776)
+ .....+++||||++|+....... ..+.+ +|+.+
T Consensus 123 g----------~~P~~ia~SpDGk~lyVan~~~~----------------------------------~~v~V~~iD~~t 158 (368)
T 1mda_H 123 G----------PRVHIIGNCASSACLLFFLFGSS----------------------------------AAAGLSVPGASD 158 (368)
T ss_dssp S----------CCTTSEEECTTSSCEEEEECSSS----------------------------------CEEEEEETTTEE
T ss_pred C----------CCcceEEEcCCCCEEEEEccCCC----------------------------------CeEEEEEEchhh
Confidence 0 01346889999998876543211 23444 67666
Q ss_pred CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC-----CceEEEEEeccCceeeccccc
Q 004067 295 GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-----GQRKVILVEELDSWVNLHDCF 369 (776)
Q Consensus 295 ~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~-----g~~~~l~~~~~~~~~~~~~~~ 369 (776)
...+..+ .. ....|+|+..++.... +..+..+|+++ ++... ... ..+... -
T Consensus 159 --v~~i~v~--------~~-----~~~~p~g~~~~~~~~~---dg~~~~vd~~~~~~~~~~v~~--~~t-~~i~vg---~ 214 (368)
T 1mda_H 159 --DQLTKSA--------SC-----FHIHPGAAATHYLGSC---PASLAASDLAAAPAAAGIVGA--QCT-GAQNCS---S 214 (368)
T ss_dssp --EEEEECS--------SC-----CCCEEEETTEEECCCC---TTSCEEEECCSSCCCCEECCC--CSC-TTSCBC---S
T ss_pred --ceEEECC--------Cc-----eEEccCCCeEEEEEcC---CCCEEEEECccccccCCeEEE--Eee-eeeeCC---C
Confidence 4455331 11 1123444322222111 11123344443 22110 000 000000 0
Q ss_pred ccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeec---ccc-------CCeEEEE--EEeecCCCcEEEEEEccC-C
Q 004067 370 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGP---ITE-------GDWMVEQ--IVGVNEASGQVYFTGTLD-G 436 (776)
Q Consensus 370 ~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~---lt~-------~~~~~~~--~~~~s~dg~~i~~~~~~~-~ 436 (776)
.|. ...+++.++|.+. + .++.+|..++..+. +.. ..+.... ...+++||+++|+..... +
T Consensus 215 ~P~---~~~~~~~~~~vs~--~--~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~ 287 (368)
T 1mda_H 215 QAA---QANYPGMLVWAVA--S--SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSR 287 (368)
T ss_dssp CCE---EETTTTEEEECBS--S--CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSS
T ss_pred Ccc---ccccCCEEEEEcC--C--EEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccC
Confidence 011 0334566777776 4 79999987643221 211 1121111 134899999999875411 1
Q ss_pred C---ceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEee-CCCCCCEEEEEEcCCCceeEeec
Q 004067 437 P---LESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHD-SLDSPPRILLCSLQDGSLVLPLY 507 (776)
Q Consensus 437 ~---~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~l~ 507 (776)
. ....+..+|+.+ ++ .+.++..+.....+.|+|||++++++.. .. ..|.++|+.+++.++.+.
T Consensus 288 ~~~~~~~~~~ViD~~t-~~----vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~---~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 288 SCLAAAENTSSVTASV-GQ----TSGPISNGHDSDAIIAAQDGASDNYANSAGT---EVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp CTTSCEEEEEEEESSS-CC----EEECCEEEEEECEEEECCSSSCEEEEEETTT---TEEEEEESSSCEEEEECC
T ss_pred cccccCCCEEEEECCC-Ce----EEEEEECCCCcceEEECCCCCEEEEEccCCC---CeEEEEECCCCcEEEEEE
Confidence 0 001233777632 22 4555655445678899999999888877 33 369999999998776653
No 422
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.86 E-value=3.8e-09 Score=112.14 Aligned_cols=113 Identities=14% Similarity=0.076 Sum_probs=78.0
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHH-HHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQY-LRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 630 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~-l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~ 630 (776)
...|+||++||..++.. ..|.. .++.. ++..+|.|+++|+||+|.+... ..... . ....+++.+.++++.
T Consensus 67 ~~~p~vvliHG~~~s~~--~~w~~---~l~~~ll~~~~~~VI~vD~~g~g~s~y~--~~~~~-~-~~v~~~la~ll~~L~ 137 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGE--ESWLS---TMCQNMFKVESVNCICVDWKSGSRTAYS--QASQN-V-RIVGAEVAYLVGVLQ 137 (449)
T ss_dssp TTSEEEEEECCCCCTTC--TTHHH---HHHHHHHHHCCEEEEEEECHHHHSSCHH--HHHHH-H-HHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCCCCC--ccHHH---HHHHHHHhcCCeEEEEEeCCcccCCccH--HHHHH-H-HHHHHHHHHHHHHHH
Confidence 34589999999765421 12321 13344 4567999999999999876521 11110 0 011346777777776
Q ss_pred HcCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 631 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 631 ~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
++..++.+++.|+||||||++|+.++.++|++++.++++.|..
T Consensus 138 ~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 138 SSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 4434467899999999999999999999999999999877654
No 423
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.86 E-value=8.9e-07 Score=94.11 Aligned_cols=219 Identities=10% Similarity=-0.039 Sum_probs=130.3
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.|..++|+|||+ |++.... ...|+++|++++....+.... .... +.|+|
T Consensus 132 ~P~~la~d~~g~-lyv~d~~----~~~I~~id~~~g~~~~~~~~~------------------------~~~~-ia~~~- 180 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAYQRD----DPRVRLISVDDNKVTTVHPGF------------------------KGGK-PAVTK- 180 (409)
T ss_dssp CEEEEEECSTTE-EEEEETT----TTEEEEEETTTTEEEEEEETC------------------------CBCB-CEECT-
T ss_pred CceEEEEeCCCC-EEEEecC----CCcEEEEECCCCEEEEeeccC------------------------CCCc-eeEec-
Confidence 457889999998 6555442 257999999999887766421 1223 78999
Q ss_pred CCCceEEEEeCC-C--cEEEEeCCCCccceec---CCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeEEeeC
Q 004067 136 SSKKKIIMVPLP-D--GIYFQDLSCSKPELKL---SSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQLTHG 208 (776)
Q Consensus 136 ~~dg~~l~~~~~-~--~l~~~d~~~~~~~~~l---~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~lt~~ 208 (776)
+|+.|++... + .|++++..++.....+ ..........++++|++..|.+... +.|++++++++....+...
T Consensus 181 --~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~ 258 (409)
T 3hrp_A 181 --DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL 258 (409)
T ss_dssp --TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEEC
T ss_pred --CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecc
Confidence 9998888733 3 7999999877653133 1212223677899996666666432 3599999998876555221
Q ss_pred CCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEE
Q 004067 209 ANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 288 (776)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~ 288 (776)
+.. +...+. ....++|+|+++.|++..... ..|+
T Consensus 259 ~~~-----g~~~~~------P~~~ia~~p~~g~lyv~d~~~-----------------------------------~~I~ 292 (409)
T 3hrp_A 259 ELS-----GSLGTN------PGPYLIYYFVDSNFYMSDQNL-----------------------------------SSVY 292 (409)
T ss_dssp CCC-----SCCCCS------SCCEEEEETTTTEEEEEETTT-----------------------------------TEEE
T ss_pred ccc-----CCCCCC------ccccEEEeCCCCEEEEEeCCC-----------------------------------CEEE
Confidence 110 000000 012788999877776653211 2466
Q ss_pred EEEcCCCceEEEEcccCCCC------CCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEe
Q 004067 289 VVSAAGGPVSWMDLQCGGTD------QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 357 (776)
Q Consensus 289 ~~d~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 357 (776)
+++.++......... +... ..........++++|||+ |+++ +.. ....|.++++.+|....+...
T Consensus 293 ~~~~~g~~~~~~g~~-~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyva-d~~-~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 293 KITPDGECEWFCGSA-TQKTVQDGLREEALFAQPNGMTVDEDGN-FYIV-DGF-KGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp EECTTCCEEEEEECT-TCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEE-ETT-TTCEEEEEETTTTEEEEEEEC
T ss_pred EEecCCCEEEEEeCC-CCCCcCCCcccccEeCCCeEEEEeCCCC-EEEE-eCC-CCCEEEEEECCCCEEEEEeCC
Confidence 666665422211110 0000 000123456799999998 4444 330 234699999888887766554
No 424
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.86 E-value=6.3e-09 Score=110.02 Aligned_cols=114 Identities=13% Similarity=0.008 Sum_probs=74.1
Q ss_pred ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhh--hhccCC----ccHHHHHHHHH
Q 004067 554 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI--KHNCGR----IDAEDQLTGAE 627 (776)
Q Consensus 554 ~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~--~~~~~~----~~~~D~~~~i~ 627 (776)
.| |+++|||.+.... .+. ............|+.|+++|+||+|.|...-.... ...++. ..++|+...++
T Consensus 39 ~P-i~l~~Ggeg~~~~--~~~-~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~ 114 (446)
T 3n2z_B 39 GS-ILFYTGNEGDIIW--FCN-NTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIK 114 (446)
T ss_dssp CE-EEEEECCSSCHHH--HHH-HCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHH
T ss_pred CC-EEEEeCCCCcchh--hhh-cccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHH
Confidence 46 5666888776431 111 00112233345689999999999999853211100 011221 23667788888
Q ss_pred HHHHcC-CCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCC
Q 004067 628 WLIKQG-LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAP 671 (776)
Q Consensus 628 ~l~~~~-~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~ 671 (776)
++.... .....+++++||||||++|++++.++|+++.++|+.++
T Consensus 115 ~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 115 HLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 777642 22446899999999999999999999999999888654
No 425
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.86 E-value=3.5e-09 Score=116.14 Aligned_cols=131 Identities=17% Similarity=0.275 Sum_probs=86.6
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHH-hCCcEEEEECCCCCCCCchhhhh--h-hhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEA--S-IKH 612 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg~g~~~~~~~~--~-~~~ 612 (776)
+...+|.|... ...+++|+||++|||+........+.. .....+.++ ..|++|+.+|||... .| |.. . ...
T Consensus 106 l~l~v~~P~~~-~~~~~~Pviv~iHGGg~~~g~~~~~~~-~~l~~~~l~~~~~~vvv~~nYRl~~-~g--f~~~~~~~~~ 180 (544)
T 1thg_A 106 LYLNVFRPAGT-KPDAKLPVMVWIYGGAFVYGSSAAYPG-NSYVKESINMGQPVVFVSINYRTGP-FG--FLGGDAITAE 180 (544)
T ss_dssp CEEEEEEETTC-CTTCCEEEEEEECCCTTCCSGGGGCCS-HHHHHHHHHTTCCCEEEEECCCCHH-HH--HCCSHHHHHH
T ss_pred eEEEEEeCCCC-CCCCCCcEEEEECCCccccCCccccCc-hHHHHHHhhcCCCEEEEeCCCCCCc-cc--CCCccccccc
Confidence 56677888753 122578999999998754432222211 111122222 358999999999532 11 110 0 011
Q ss_pred ccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhC--------CCceEEEEEcCCC
Q 004067 613 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPV 672 (776)
Q Consensus 613 ~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~--------~~~~~~~v~~~~~ 672 (776)
..+...+.|+..+++|+.++ ...|+++|.|+|+|+||++++.++... ..+|+++|+.+|.
T Consensus 181 ~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 181 GNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 23344588999999999885 346999999999999999998877752 4578999998874
No 426
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.83 E-value=6e-07 Score=89.51 Aligned_cols=236 Identities=11% Similarity=0.047 Sum_probs=141.8
Q ss_pred CCEEEEEeCCCCcCcceEEEEecCCCceE-----EeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCce
Q 004067 66 DNLITYLLSPDHSLSRKVFSFDPKTCKQE-----LVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKK 140 (776)
Q Consensus 66 G~~ia~~~~~~~~~~~~l~~~~~~~~~~~-----~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~ 140 (776)
|+.|.|... ..|++++++++..+ .+...+ ......+.|++ +++
T Consensus 1 ~~~l~~~~~------~~I~~~~~~g~~~~~~~~~~~~~~~-----------------------~~~~~gi~~d~---~~~ 48 (267)
T 1npe_A 1 GTHLLFAQT------GKIERLPLERNTMKKTEAKAFLHIP-----------------------AKVIIGLAFDC---VDK 48 (267)
T ss_dssp CEEEEEEEE------EEEEEEEESSSCBCGGGCEEEEEEE-----------------------EEEEEEEEEET---TTT
T ss_pred CcEEEEEcC------CeEEEEEecCcccccccceeeecCC-----------------------CCcEEEEEEec---CCC
Confidence 556777643 35999999887642 111100 12356788999 999
Q ss_pred EEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceec
Q 004067 141 IIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTH 216 (776)
Q Consensus 141 ~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~ 216 (776)
.|+++ ..+.|++++++++... .+..........++++|++..|.+... +.|+++++++...+.+...+.
T Consensus 49 ~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~------ 121 (267)
T 1npe_A 49 VVYWTDISEPSIGRASLHGGEPT-TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL------ 121 (267)
T ss_dssp EEEEEETTTTEEEEEESSSCCCE-EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC------
T ss_pred EEEEEECCCCEEEEEecCCCCcE-EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCC------
Confidence 99987 4568999999988765 433222123567889999888766654 469999988665554432221
Q ss_pred CCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCc
Q 004067 217 GLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 296 (776)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 296 (776)
....+++++|+++.|++...... ...|+++++++..
T Consensus 122 -----------~~P~~i~vd~~~g~lyv~~~~~~---------------------------------~~~I~~~~~dg~~ 157 (267)
T 1npe_A 122 -----------VNPRGIVTDPVRGNLYWTDWNRD---------------------------------NPKIETSHMDGTN 157 (267)
T ss_dssp -----------SSEEEEEEETTTTEEEEEECCSS---------------------------------SCEEEEEETTSCC
T ss_pred -----------CCccEEEEeeCCCEEEEEECCCC---------------------------------CcEEEEEecCCCC
Confidence 11347889999888877542110 1346777877655
Q ss_pred eEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCc
Q 004067 297 VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGV 376 (776)
Q Consensus 297 ~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 376 (776)
...+.. ........++++||++.|+++.. . ...|+++|++++..+.+... .. .| .++
T Consensus 158 ~~~~~~--------~~~~~P~gia~d~~~~~lyv~d~-~--~~~I~~~~~~g~~~~~~~~~--~~--------~P--~gi 214 (267)
T 1npe_A 158 RRILAQ--------DNLGLPNGLTFDAFSSQLCWVDA-G--THRAECLNPAQPGRRKVLEG--LQ--------YP--FAV 214 (267)
T ss_dssp CEEEEC--------TTCSCEEEEEEETTTTEEEEEET-T--TTEEEEEETTEEEEEEEEEC--CC--------SE--EEE
T ss_pred cEEEEE--------CCCCCCcEEEEcCCCCEEEEEEC-C--CCEEEEEecCCCceEEEecC--CC--------Cc--eEE
Confidence 444421 12234567899999877766643 2 34699999987655444321 10 01 122
Q ss_pred cccCCeEEEEeccCCceEEEEEeCCCce-eeccc
Q 004067 377 TKYSGGFIWASEKTGFRHLYLHDINGTC-LGPIT 409 (776)
Q Consensus 377 ~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt 409 (776)
+.+++.+|++....+ .|++++.++++ ...+.
T Consensus 215 ~~d~~~lyva~~~~~--~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 215 TSYGKNLYYTDWKTN--SVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEETTEEEEEETTTT--EEEEEETTTTEEEEEEC
T ss_pred EEeCCEEEEEECCCC--eEEEEeCCCCCceEEEc
Confidence 334444554443344 78888887554 34443
No 427
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.83 E-value=5.9e-09 Score=110.69 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=75.3
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHH-hCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHH
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 631 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 631 (776)
..|+||++||..++.. ..|. ..++..+. ..+|.|+++|+||+|.+... ..... .....+++.+.++++.+
T Consensus 69 ~~p~vvliHG~~~s~~--~~w~---~~l~~~ll~~~~~~VI~vD~~g~g~s~y~--~~~~~--~~~~a~~l~~ll~~L~~ 139 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGE--ENWL---LDMCKNMFKVEEVNCICVDWKKGSQTSYT--QAANN--VRVVGAQVAQMLSMLSA 139 (450)
T ss_dssp TSEEEEEECCCCCTTC--TTHH---HHHHHHHTTTCCEEEEEEECHHHHSSCHH--HHHHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEccCCCCCC--cchH---HHHHHHHHhcCCeEEEEEeCccccCCcch--HHHHH--HHHHHHHHHHHHHHHHH
Confidence 4589999999765431 1231 11234444 45899999999998765421 11110 00124567777777764
Q ss_pred cCCCCCCcEEEEeechHHHHHHHHHhhCCCceEEEEEcCCCC
Q 004067 632 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 673 (776)
Q Consensus 632 ~~~id~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~v~~~~~~ 673 (776)
+..++.+++.|+||||||++|+.++.++|+ +..++++.|..
T Consensus 140 ~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 140 NYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp HHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred hcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 433467899999999999999999999999 89998877654
No 428
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.81 E-value=1e-08 Score=112.60 Aligned_cols=126 Identities=18% Similarity=0.233 Sum_probs=85.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCC----CCCchhhhhhhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGT----ARRGLKFEASIK 611 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~----g~~~~~~~~~~~ 611 (776)
+...+|.|... ..+++|+||++|||+......... ......|++ .|++|+.+|||.. +.... ..
T Consensus 97 l~l~v~~P~~~--~~~~~Pviv~iHGGg~~~g~~~~~----~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~-----~~ 165 (543)
T 2ha2_A 97 LYLNVWTPYPR--PASPTPVLIWIYGGGFYSGAASLD----VYDGRFLAQVEGAVLVSMNYRVGTFGFLALPG-----SR 165 (543)
T ss_dssp CEEEEEEESSC--CSSCEEEEEEECCSTTTCCCTTSG----GGCTHHHHHHHCCEEEEECCCCHHHHHCCCTT-----CS
T ss_pred CeEEEeecCCC--CCCCCeEEEEECCCccccCCCCCC----cCChHHHHhcCCEEEEEecccccccccccCCC-----CC
Confidence 55566778652 225789999999986433211110 112345654 7999999999932 11100 00
Q ss_pred hccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhC--CCceEEEEEcCCCC
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 673 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~--~~~~~~~v~~~~~~ 673 (776)
...+...+.|+..+++|+.++ ...|+++|.|+|+|+||++++.++... +.+|+++|+.+|..
T Consensus 166 ~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 112233488999999999885 346999999999999999998887753 46899999988853
No 429
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.81 E-value=9.7e-07 Score=88.95 Aligned_cols=210 Identities=10% Similarity=0.038 Sum_probs=120.4
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEe-ec
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWV-KT 135 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s-p~ 135 (776)
|..++++|||+ |+..... ...|+++++++...+.+..... .. ..........++ +
T Consensus 32 p~~v~~~~~g~-l~v~~~~----~~~i~~~d~~g~~~~~~~~~~~---------~~---------~~~~~p~~i~~~~~- 87 (286)
T 1q7f_A 32 PSGVAVNAQND-IIVADTN----NHRIQIFDKEGRFKFQFGECGK---------RD---------SQLLYPNRVAVVRN- 87 (286)
T ss_dssp EEEEEECTTCC-EEEEEGG----GTEEEEECTTSCEEEEECCBSS---------ST---------TCBSSEEEEEEETT-
T ss_pred CceEEECCCCC-EEEEECC----CCEEEEECCCCcEEEEecccCC---------Cc---------ccccCceEEEEEcC-
Confidence 57889999998 3333222 2469999998654444432100 00 001235567784 6
Q ss_pred CCCceEEEEeC--CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE--CCcEEEEecCCCceeEEeeCCCC
Q 004067 136 SSKKKIIMVPL--PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR--DCELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 136 ~~dg~~l~~~~--~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~~g~~~~lt~~~~~ 211 (776)
+|+.++... ++.|+++|.++.... .+..........+.++|||+ |.+.. ++.|++++.++.....+.....
T Consensus 88 --~g~l~v~~~~~~~~i~~~d~~g~~~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~~~~~~~~~- 162 (286)
T 1q7f_A 88 --SGDIIVTERSPTHQIQIYNQYGQFVR-KFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNVLHKFGCSKH- 162 (286)
T ss_dssp --TTEEEEEECGGGCEEEEECTTSCEEE-EECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEEECTTT-
T ss_pred --CCeEEEEcCCCCCEEEEECCCCcEEE-EecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCEEEEeCCCCc-
Confidence 666544443 678999996655444 44332222356789999997 33333 2469999976554444432111
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
.....+++++|||+ |++..... ..|++||
T Consensus 163 ---------------~~~p~~i~~~~~g~-l~v~~~~~-----------------------------------~~i~~~~ 191 (286)
T 1q7f_A 163 ---------------LEFPNGVVVNDKQE-IFISDNRA-----------------------------------HCVKVFN 191 (286)
T ss_dssp ---------------CSSEEEEEECSSSE-EEEEEGGG-----------------------------------TEEEEEE
T ss_pred ---------------cCCcEEEEECCCCC-EEEEECCC-----------------------------------CEEEEEc
Confidence 01134788999987 44433211 3578889
Q ss_pred cCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE
Q 004067 292 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 356 (776)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 356 (776)
.++.....+.. .........++++|||++++... . ....|.+||.++...+.+..
T Consensus 192 ~~g~~~~~~~~-------~g~~~~p~~i~~d~~G~l~v~~~--~-~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 192 YEGQYLRQIGG-------EGITNYPIGVGINSNGEILIADN--H-NNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp TTCCEEEEESC-------TTTSCSEEEEEECTTCCEEEEEC--S-SSCEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEEcc-------CCccCCCcEEEECCCCCEEEEeC--C-CCEEEEEECCCCCEEEEEcc
Confidence 87665555522 11124567899999997443321 1 11269999976655555543
No 430
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.80 E-value=9.3e-07 Score=88.96 Aligned_cols=281 Identities=10% Similarity=0.012 Sum_probs=138.9
Q ss_pred eeeEEEeecCCCce--EEEEeCCCcEEEEeCCCC---ccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCc
Q 004067 127 VTRYEWVKTSSKKK--IIMVPLPDGIYFQDLSCS---KPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINE 201 (776)
Q Consensus 127 ~~~~~~sp~~~dg~--~l~~~~~~~l~~~d~~~~---~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~ 201 (776)
+....|-. ++.+ .|+.+-...|-+|+...+ +....++..+ ..+..+.++||-..|+-+.-++|-. +.
T Consensus 42 ~~~~~~~~--~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~-----~~ 113 (356)
T 2w18_A 42 VSAMFWER--AGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAE-VPVLQIVPVPDVYNLVCVALGNLEI-----RE 113 (356)
T ss_dssp EEEEEEC------CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCS-SCEEEECCCTTCCSCEEEEECSSSE-----EE
T ss_pred Eeeeeecc--CCCCccEEEEeccceEEEcccCCCccceeeEEEeccC-ceeEEEEEcCcccceeeeeeccccc-----cc
Confidence 45666754 1333 455566778999998887 3332444443 3478899999999888887553321 22
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECCC----CCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCC
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLD----SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPF 277 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD----g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (776)
+ +++++||| ++.++....+ ...+.++ ... .... ..
T Consensus 114 v----------------------------~sla~spd~~~~~~~l~s~g~~---~~v~~l~--~g~-----lv~s---s~ 152 (356)
T 2w18_A 114 I----------------------------RALFCSSDDESEKQVLLKSGNI---KAVLGLT--KRR-----LVSS---SG 152 (356)
T ss_dssp E----------------------------EEECC------CCEEEEEEEEE---EEEEEET--TTE-----EEEE---ES
T ss_pred e----------------------------EEEEECCCccccccEEEeCCCe---EEEEecC--CCc-----EEEe---cc
Confidence 2 24456666 6665553321 0011110 000 0000 00
Q ss_pred CCCCCCeEEEEEEEcC-CCceE-EEEcccCCCCCCCCcceEEEEEecc---CCeEEEEEEeecCceEEEEEEECCCCceE
Q 004067 278 AGASNVKVRLGVVSAA-GGPVS-WMDLQCGGTDQNYDEEYLARVNWMH---GNILTAQVLNRSQTKLKVLKFDIKTGQRK 352 (776)
Q Consensus 278 ~g~~~~~~~l~~~d~~-~~~~~-~l~~~~~~~~~~~~~~~~~~~~~Sp---Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~ 352 (776)
......|.+|++. +|+.. .+ ..+...+..++||| |++.|+..+ .+..|.+||+++|+..
T Consensus 153 ---~g~d~~V~~~~~s~dG~~~~s~---------~~~~~~v~~l~fs~~~g~~~~LaSgS----~D~TIkIWDl~TGk~l 216 (356)
T 2w18_A 153 ---TLSDQQVEVMTFAEDGGGKENQ---------FLMPPEETILTFAEVQGMQEALLGTT----IMNNIVIWNLKTGQLL 216 (356)
T ss_dssp ---SSTTCEEEEEEECTTSCEEEEE---------EECCCSSCEEEEEEEETSTTEEEEEE----TTSEEEEEETTTCCEE
T ss_pred ---cCCCCcEEEEEECCCCceeeee---------ccCCCceeeEEeeccCCCCceEEEec----CCCcEEEEECCCCcEE
Confidence 0001356777773 34432 22 12333444567777 556777665 5667999999999864
Q ss_pred EEEE-eccCceeecccccccCCCCccccCCeEEEE----------eccCCceEEEEEeCCCceeeccc-----cC-CeEE
Q 004067 353 VILV-EELDSWVNLHDCFTPLDKGVTKYSGGFIWA----------SEKTGFRHLYLHDINGTCLGPIT-----EG-DWMV 415 (776)
Q Consensus 353 ~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------s~~~g~~~l~~~~~~g~~~~~lt-----~~-~~~~ 415 (776)
.... +.........-.|+|. +.++.+ ........|.+|++.+++...+. .+ ...
T Consensus 217 ~tL~g~~~~v~~v~~vafSpd--------G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~- 287 (356)
T 2w18_A 217 KKMHIDDSYQASVCHKAYSEM--------GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR- 287 (356)
T ss_dssp EEEECCC---CCCEEEEEEET--------TEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC-
T ss_pred EEEcCCCcceeeeEEEEECCC--------CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce-
Confidence 4333 2211111101124442 222211 11222358888998888643221 11 111
Q ss_pred EEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCC-CeE-EEEEcCCcCEEEEEeeCCCCCCEEE
Q 004067 416 EQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKH-VAVLDHNMRNFVDFHDSLDSPPRIL 493 (776)
Q Consensus 416 ~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~-~~~-~~~~spdg~~l~~~~~~~~~~~~i~ 493 (776)
+...+.++. +++....++. ++||.+. .|. .+..|+.+. .+. .++|||||++|+..+. + ..|+
T Consensus 288 --~lsg~~sg~-~lASgS~DgT--IkIWDl~---tGk----~l~tL~gH~~~vvs~vafSPDG~~LaSGS~-D---~TIk 351 (356)
T 2w18_A 288 --FLEGDVKDH-CAAAILTSGT--IAIWDLL---LGQ----CTALLPPVSDQHWSFVKWSGTDSHLLAGQK-D---GNIF 351 (356)
T ss_dssp --EEEEEEETT-EEEEEETTSC--EEEEETT---TCS----EEEEECCC--CCCCEEEECSSSSEEEEECT-T---SCEE
T ss_pred --eEccccCCC-EEEEEcCCCc--EEEEECC---CCc----EEEEecCCCCCeEEEEEECCCCCEEEEEEC-C---CcEE
Confidence 111222234 3444444544 7888876 343 556676543 233 5799999998886542 2 2478
Q ss_pred EEEc
Q 004067 494 LCSL 497 (776)
Q Consensus 494 ~~~~ 497 (776)
+||.
T Consensus 352 lWd~ 355 (356)
T 2w18_A 352 VYHY 355 (356)
T ss_dssp EEEE
T ss_pred EecC
Confidence 7774
No 431
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.80 E-value=2.5e-06 Score=87.99 Aligned_cols=220 Identities=7% Similarity=0.028 Sum_probs=125.6
Q ss_pred CCceeEcCCCCEEEEEeCCCC-------------------cCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHH
Q 004067 57 PTSIGFSPDDNLITYLLSPDH-------------------SLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRR 117 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~-------------------~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 117 (776)
+..++++|||+.++-.+.... .....|+++|.++|+.........
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~---------------- 89 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL---------------- 89 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT----------------
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc----------------
Confidence 478999999986654332210 001369999999888755442100
Q ss_pred HHHHHhcCCeeeEEEeecCCCceEEEEe--CCCcEEEEeCCCCc--cceecCC--------CCCCCccCceeCC-CCCEE
Q 004067 118 ERLRERGLGVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCSK--PELKLSS--------SSCSPVIDPHLSS-DGTMI 184 (776)
Q Consensus 118 ~~~~~~~~~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~--~~~~l~~--------~~~~~~~~~~~Sp-Dg~~l 184 (776)
........++| ||+ |+++ .+..|+++|.++.. .. .+.. ........++++| +|+.+
T Consensus 90 ------~~~p~gia~d~---~g~-l~v~d~~~~~v~~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 90 ------FYLPHGLSIDT---DGN-YWVTDVALHQVFKLDPHSKEGPLL-ILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp ------CSSEEEEEECT---TSC-EEEEETTTTEEEEECTTCSSCCSE-EESBTTBCCCSTTCCSSEEEEEECTTTCCEE
T ss_pred ------cCCceEEEECC---CCC-EEEEECCCCEEEEEeCCCCeEEEE-EecccCCCCCCccccCCCcEEEEeCCCCeEE
Confidence 12456788999 999 5554 45779999998763 22 3321 1111245689999 56544
Q ss_pred EEEE--CCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCC
Q 004067 185 AFVR--DCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGK 262 (776)
Q Consensus 185 a~~~--~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 262 (776)
+.-. ++.|++++.++.....+...+.... ....++....+++++||+..|+......
T Consensus 159 v~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~--------~~~~~~~~p~gia~d~~~g~l~v~d~~~------------- 217 (329)
T 3fvz_A 159 VSDGYCNSRIVQFSPSGKFVTQWGEESSGSS--------PRPGQFSVPHSLALVPHLDQLCVADREN------------- 217 (329)
T ss_dssp EEECSSCCEEEEECTTSCEEEEECEECCSSS--------CCTTEESCEEEEEEETTTTEEEEEETTT-------------
T ss_pred EEeCCCCCeEEEEcCCCCEEEEeccCCCCCC--------CCCcccCCCcEEEEECCCCEEEEEECCC-------------
Confidence 4332 3469999965544444432221100 0001122245788999977776543211
Q ss_pred CCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceE-EEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEee----cCc
Q 004067 263 SSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR----SQT 337 (776)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~----~~~ 337 (776)
..|.+|+.++|+.. .+.. .........+.|+| |. ++..... +..
T Consensus 218 ----------------------~~I~~~~~~~G~~~~~~~~-------~~~~~~~~~~~~~p-g~-~~~~~g~~~v~~~~ 266 (329)
T 3fvz_A 218 ----------------------GRIQCFKTDTKEFVREIKH-------ASFGRNVFAISYIP-GF-LFAVNGKPYFGDQE 266 (329)
T ss_dssp ----------------------TEEEEEETTTCCEEEEECC-------TTTTTCEEEEEEET-TE-EEEEECCCCTTCSC
T ss_pred ----------------------CEEEEEECCCCcEEEEEec-------cccCCCcceeeecC-CE-EEEeCCCEEeccCC
Confidence 35789999866644 3322 22334566889999 53 3222211 112
Q ss_pred eEEEEEEECCCCceEEEE
Q 004067 338 KLKVLKFDIKTGQRKVIL 355 (776)
Q Consensus 338 ~~~l~~~d~~~g~~~~l~ 355 (776)
...|++||+.+|+.....
T Consensus 267 ~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 267 PVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp CCCEEEEETTTCCEEEEE
T ss_pred CcEEEEEEcCCCeEEEEE
Confidence 347999999888765543
No 432
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.79 E-value=3e-05 Score=86.61 Aligned_cols=141 Identities=11% Similarity=-0.007 Sum_probs=98.2
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.|++++++|+|..... ..|++++++++..+.+..... ......++.+
T Consensus 39 ~~~l~~d~~~~~lywtD~~~----~~I~r~~~~g~~~~~v~~~g~-----------------------~~P~GlAvD~-- 89 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISL----KTISRAFMNGSALEHVVEFGL-----------------------DYPEGMAVDW-- 89 (628)
T ss_dssp EEEEEEETTTTEEEEEETTT----TEEEEEETTSCSCEEEECSSC-----------------------SCCCEEEEET--
T ss_pred eEEEEEECCCCEEEEEECCC----CeEEEEECCCCCcEEEEeCCC-----------------------CCcceEEEEe--
Confidence 47889999999999887644 479999999887766664211 1234567777
Q ss_pred CCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE---CCcEEEEecCCCceeEEeeCCCC
Q 004067 137 SKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR---DCELHVLNLLINEQRQLTHGANG 211 (776)
Q Consensus 137 ~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~---~~~l~~~~l~~g~~~~lt~~~~~ 211 (776)
.++.|+++ ..+.|.+.+++|+..+ .+..........+++.|....|.++. ...|++.++++...+.+.....
T Consensus 90 -~~~~LY~tD~~~~~I~v~~~dG~~~~-~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~- 166 (628)
T 4a0p_A 90 -LGKNLYWADTGTNRIEVSKLDGQHRQ-VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVG- 166 (628)
T ss_dssp -TTTEEEEEETTTTEEEEEETTSTTCE-EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCS-
T ss_pred -CCCEEEEEECCCCEEEEEecCCCcEE-EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCC-
Confidence 78888887 3467999999988766 44322222356788898777776665 3479999999887776653211
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQ 246 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~ 246 (776)
...++++++++++|++..
T Consensus 167 -----------------~P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 167 -----------------RANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp -----------------SEEEEEEETTTTEEEEEE
T ss_pred -----------------CcceEEEccccCEEEEEE
Confidence 133677888888776654
No 433
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.79 E-value=1.4e-06 Score=89.10 Aligned_cols=210 Identities=10% Similarity=0.049 Sum_probs=121.1
Q ss_pred CCCceeEcCCCCEEEEEeCC---CCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE
Q 004067 56 APTSIGFSPDDNLITYLLSP---DHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW 132 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~---~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 132 (776)
.+..++|+|||+ |++.+.. .+.....|+++++.+++.+.+..... . .....+....+
T Consensus 19 ~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~--------~-----------~~~~~~~~i~~ 78 (314)
T 1pjx_A 19 GAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV--------N-----------GYGGIPAGCQC 78 (314)
T ss_dssp TCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEE--------T-----------TEECCEEEEEE
T ss_pred CccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEeccc--------C-----------CCCCCCceEEE
Confidence 358999999996 5444100 01112469999998888766542000 0 00134677889
Q ss_pred eecCCC-ceEEEEeCCCcEEEEeCCCCccceec-CCCC----CCCccCceeCCCCCEEEEEEC----------------C
Q 004067 133 VKTSSK-KKIIMVPLPDGIYFQDLSCSKPELKL-SSSS----CSPVIDPHLSSDGTMIAFVRD----------------C 190 (776)
Q Consensus 133 sp~~~d-g~~l~~~~~~~l~~~d~~~~~~~~~l-~~~~----~~~~~~~~~SpDg~~la~~~~----------------~ 190 (776)
++ | |+.++......|+++|.+ ++.+ .+ .... ...+..+.++|||+..+-... .
T Consensus 79 ~~---~~g~l~v~~~~~~l~~~d~~-g~~~-~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 79 DR---DANQLFVADMRLGLLVVQTD-GTFE-EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp CS---SSSEEEEEETTTEEEEEETT-SCEE-ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred ec---CCCcEEEEECCCCEEEEeCC-CCEE-EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCC
Confidence 99 9 765554555689999999 6655 44 2211 112567889999975433322 3
Q ss_pred cEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEEC----CCCCeEEEEEecCCCCCeEEEeecCCCCCC
Q 004067 191 ELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWS----LDSKFIAFTQVDSSEIPRFRIMHQGKSSVG 266 (776)
Q Consensus 191 ~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws----pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 266 (776)
.|+.++.+ ++.+.+..... ....++|+ |||+.|++.....
T Consensus 154 ~l~~~~~~-g~~~~~~~~~~------------------~~~~i~~~~~~d~dg~~l~v~~~~~----------------- 197 (314)
T 1pjx_A 154 SIYCFTTD-GQMIQVDTAFQ------------------FPNGIAVRHMNDGRPYQLIVAETPT----------------- 197 (314)
T ss_dssp EEEEECTT-SCEEEEEEEES------------------SEEEEEEEECTTSCEEEEEEEETTT-----------------
T ss_pred eEEEECCC-CCEEEeccCCC------------------CcceEEEecccCCCCCEEEEEECCC-----------------
Confidence 58888877 66554432111 12367899 9998776654211
Q ss_pred CCCcceecCCCCCCCCCeEEEEEEEcC-CCceEEEEcccCCCCCCCCc-ceEEEEEeccCCeEEEEEEeecCceEEEEEE
Q 004067 267 SEAQEDHAYPFAGASNVKVRLGVVSAA-GGPVSWMDLQCGGTDQNYDE-EYLARVNWMHGNILTAQVLNRSQTKLKVLKF 344 (776)
Q Consensus 267 ~~~~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~l~~~~~~~~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~ 344 (776)
..|++|+.+ +++......-.. ..... .....+++++||++++... ....|++|
T Consensus 198 ------------------~~i~~~~~~~~g~~~~~~~~~~---~~~~~~~~p~~i~~d~~G~l~v~~~----~~~~i~~~ 252 (314)
T 1pjx_A 198 ------------------KKLWSYDIKGPAKIENKKVWGH---IPGTHEGGADGMDFDEDNNLLVANW----GSSHIEVF 252 (314)
T ss_dssp ------------------TEEEEEEEEETTEEEEEEEEEE---CCCCSSCEEEEEEEBTTCCEEEEEE----TTTEEEEE
T ss_pred ------------------CeEEEEECCCCCccccceEEEE---CCCCCCCCCCceEECCCCCEEEEEc----CCCEEEEE
Confidence 246777765 444221110000 01122 4567799999997443322 22369999
Q ss_pred ECCCCce
Q 004067 345 DIKTGQR 351 (776)
Q Consensus 345 d~~~g~~ 351 (776)
|+++|+.
T Consensus 253 d~~~g~~ 259 (314)
T 1pjx_A 253 GPDGGQP 259 (314)
T ss_dssp CTTCBSC
T ss_pred cCCCCcE
Confidence 9986654
No 434
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.79 E-value=4.4e-09 Score=110.77 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=79.3
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCc---EEEEECCCCCCCC-----c-----hhhhhh----------
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI---LVWKLDNRGTARR-----G-----LKFEAS---------- 609 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~---~v~~~d~rg~g~~-----~-----~~~~~~---------- 609 (776)
+.|+||++||..++.. .|..++..|+++|| .|+++|++|+|.+ . ......
T Consensus 21 ~~ppVVLlHG~g~s~~-------~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~ 93 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAG-------QFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPE 93 (484)
T ss_dssp CCCCEEEECCTTCCGG-------GGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHH
T ss_pred CCCEEEEECCCCCCHH-------HHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccc
Confidence 4578999999876543 34556888999999 7999999998854 0 000000
Q ss_pred ----hh----hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCC---CceEEEEEcCCCCC
Q 004067 610 ----IK----HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTS 674 (776)
Q Consensus 610 ----~~----~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~---~~~~~~v~~~~~~~ 674 (776)
.. ........+++.+.++.++++. ..+++.++||||||.+++.++.++| +.++++|+++|...
T Consensus 94 ~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 94 TLDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 00 0000123567777777777653 3368999999999999999999987 47899999887654
No 435
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.78 E-value=5.4e-07 Score=96.73 Aligned_cols=166 Identities=13% Similarity=0.039 Sum_probs=105.8
Q ss_pred CeeeEEEeecCCCceEEEE---e--CCCcEEEEeCCCC-----cc---c--eecCCCCCCCccCceeCCC-CCEEEEEEC
Q 004067 126 GVTRYEWVKTSSKKKIIMV---P--LPDGIYFQDLSCS-----KP---E--LKLSSSSCSPVIDPHLSSD-GTMIAFVRD 189 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~---~--~~~~l~~~d~~~~-----~~---~--~~l~~~~~~~~~~~~~SpD-g~~la~~~~ 189 (776)
.+....|+| ||++|++ + .++.|.+||+.++ +. . ..+..+....+..++|+|+ ++.|+..+.
T Consensus 94 ~v~~l~~sp---dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 94 PIHHLALSC---DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CEEEEEECT---TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred cccEEEEcC---CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 588999999 9999995 3 4678999998764 11 0 0111112234788999998 777776664
Q ss_pred -CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCC
Q 004067 190 -CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSE 268 (776)
Q Consensus 190 -~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (776)
+.|.+||+.++.......... ..+..++|||||+.|+....+
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~-----------------~~v~~v~wspdg~~lasgs~d-------------------- 213 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPST-----------------VAVTSVCWSPKGKQLAVGKQN-------------------- 213 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGG-----------------GCEEEEEECTTSSCEEEEETT--------------------
T ss_pred CCeEEEEEcCCCcceeeccCCC-----------------CceeEEEEcCCCCEEEEEcCC--------------------
Confidence 579999999885432222111 114578999999999877643
Q ss_pred CcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeec---CceEEEEEEE
Q 004067 269 AQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS---QTKLKVLKFD 345 (776)
Q Consensus 269 ~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~---~~~~~l~~~d 345 (776)
..|.+||..+.....+..... ....+...+..+.|++++.+++...+.. .....++.|+
T Consensus 214 ----------------g~v~iwd~~~~~~~~~~~~~~--~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~ 275 (434)
T 2oit_A 214 ----------------GTVVQYLPTLQEKKVIPCPPF--YESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMAL 275 (434)
T ss_dssp ----------------SCEEEECTTCCEEEEECCCTT--CCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEE
T ss_pred ----------------CcEEEEccCCcccccccCCcc--cCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEE
Confidence 237889988433334422100 0012234789999999998665554332 2234588888
Q ss_pred CCCC
Q 004067 346 IKTG 349 (776)
Q Consensus 346 ~~~g 349 (776)
+...
T Consensus 276 l~~~ 279 (434)
T 2oit_A 276 LPKK 279 (434)
T ss_dssp CCCT
T ss_pred eccC
Confidence 8654
No 436
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.78 E-value=1.8e-08 Score=110.53 Aligned_cols=125 Identities=18% Similarity=0.193 Sum_probs=86.4
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCC----CCCchhhhhhhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGT----ARRGLKFEASIK 611 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~----g~~~~~~~~~~~ 611 (776)
+...+|.|.... +++|+||++|||+......... ......|++ .|++|+.++||.. ..... ..
T Consensus 93 l~lnv~~P~~~~---~~~Pv~v~iHGGg~~~g~~~~~----~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~-----~~ 160 (529)
T 1p0i_A 93 LYLNVWIPAPKP---KNATVLIWIYGGGFQTGTSSLH----VYDGKFLARVERVIVVSMNYRVGALGFLALPG-----NP 160 (529)
T ss_dssp CEEEEEEESSCC---SSEEEEEEECCSTTTSCCTTCG----GGCTHHHHHHHCCEEEEECCCCHHHHHCCCTT-----CT
T ss_pred CeEEEeeCCCCC---CCCeEEEEECCCccccCCCCcc----ccChHHHhccCCeEEEEecccccccccccCCC-----CC
Confidence 556777886532 5789999999986433211110 112455665 7999999999932 11100 00
Q ss_pred hccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhC--CCceEEEEEcCCCC
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 673 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~--~~~~~~~v~~~~~~ 673 (776)
...+...+.|+..+++|+.++ ...|+++|.|+|+|+||.+++.++... ..+|+++|+.+|..
T Consensus 161 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp TSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred CCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 112233488999999999875 346999999999999999999988753 45799999998864
No 437
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.76 E-value=9.6e-09 Score=113.01 Aligned_cols=124 Identities=19% Similarity=0.175 Sum_probs=84.9
Q ss_pred EEEEEEcC-----CCCCCCCCC----ceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCC----CCCc
Q 004067 537 LYGALYKP-----DESRYGPPP----YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT----ARRG 603 (776)
Q Consensus 537 l~~~~~~P-----~~~~~~~~~----~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~----g~~~ 603 (776)
+...+|.| ... ..++ +|+||++|||+......... ......|++.|++|+++|||.. ....
T Consensus 91 L~lnv~~P~~~~~~~~--~~~~~~~~~Pviv~iHGGg~~~g~~~~~----~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~ 164 (551)
T 2fj0_A 91 IHANIHVPYYALPRDA--ADKNRFAGLPVLVFIHGGGFAFGSGDSD----LHGPEYLVSKDVIVITFNYRLNVYGFLSLN 164 (551)
T ss_dssp CEEEEEEEGGGCCCC----------CEEEEEEECCSTTTSCCSCTT----TCBCTTGGGGSCEEEEECCCCHHHHHCCCS
T ss_pred eEEEEEecCccccccc--cccCcCCCCCEEEEEcCCccccCCCccc----ccCHHHHHhCCeEEEEeCCcCCccccccCc
Confidence 66777788 331 1133 89999999976433211110 1124567789999999999942 1111
Q ss_pred hhhhhhhhhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhh--CCCceEEEEEcCCC
Q 004067 604 LKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPV 672 (776)
Q Consensus 604 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~--~~~~~~~~v~~~~~ 672 (776)
. ....+...+.|+..+++|+.++ ...|+++|.|+|+|+||.+++.++.. .+.+|+++|+.+|.
T Consensus 165 ~------~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 165 S------TSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp S------SSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred c------cCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 0 0112234588999999999886 34689999999999999999998875 35689999998885
No 438
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.76 E-value=1.8e-08 Score=110.41 Aligned_cols=124 Identities=18% Similarity=0.259 Sum_probs=86.6
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHH-hCCcEEEEECCCCC----CCC-chhhhhhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGT----ARR-GLKFEASI 610 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg~----g~~-~~~~~~~~ 610 (776)
+...+|.|.... +++|+||++|||+......... ......|+ +.|++|+.++||.. ... +.
T Consensus 95 l~lnv~~P~~~~---~~~Pv~v~iHGG~~~~g~~~~~----~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~------ 161 (537)
T 1ea5_A 95 LYLNIWVPSPRP---KSTTVMVWIYGGGFYSGSSTLD----VYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGS------ 161 (537)
T ss_dssp CEEEEEECSSCC---SSEEEEEEECCSTTTCCCTTCG----GGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTC------
T ss_pred CeEEEeccCCCC---CCCeEEEEECCCcccCCCCCCC----ccChHHHHhcCCEEEEEeccCccccccccCCCC------
Confidence 556777886531 5789999999976543211110 11234565 78999999999932 111 10
Q ss_pred hhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhh--CCCceEEEEEcCCCC
Q 004067 611 KHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVT 673 (776)
Q Consensus 611 ~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~--~~~~~~~~v~~~~~~ 673 (776)
....+...+.|+..+++|+.++ ...|+++|.|+|+|.||.+++.++.. ...+|+++|+.+|..
T Consensus 162 ~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 162 QEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp SSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred CCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 0112233488999999999886 34699999999999999999988875 245799999998864
No 439
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.75 E-value=1.7e-06 Score=88.42 Aligned_cols=256 Identities=10% Similarity=0.046 Sum_probs=141.0
Q ss_pred CeeeEEEeecCCCceEEEE--------eCCCcEEEEeCCCCccceecCCC----CCCCccCceeCCC-CCEEEEEE-CCc
Q 004067 126 GVTRYEWVKTSSKKKIIMV--------PLPDGIYFQDLSCSKPELKLSSS----SCSPVIDPHLSSD-GTMIAFVR-DCE 191 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~--------~~~~~l~~~d~~~~~~~~~l~~~----~~~~~~~~~~SpD-g~~la~~~-~~~ 191 (776)
....+.|++ ||+.++. ..++.|+++|..+++.+ .+... ....+..+.++|| |+ |.+.. .+.
T Consensus 19 ~~~~~~~~~---~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~ 93 (314)
T 1pjx_A 19 GAEGPVFDK---NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLG 93 (314)
T ss_dssp TCEEEEECT---TSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSE-EEEEETTTE
T ss_pred CccCceECC---CCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCc-EEEEECCCC
Confidence 356788999 9976655 35678999999888776 44320 1123567889999 65 44443 457
Q ss_pred EEEEecCCCceeEE-eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCc
Q 004067 192 LHVLNLLINEQRQL-THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQ 270 (776)
Q Consensus 192 l~~~~l~~g~~~~l-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (776)
|++++.+ |+.+.+ ...... . .......++++|||+ |++..........
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~------~-------~~~~~~~i~~d~~g~-l~v~~~~~~~~~~---------------- 142 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEG------R-------RMQGCNDCAFDYEGN-LWITAPAGEVAPA---------------- 142 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTS------C-------BCBCCCEEEECTTSC-EEEEECBCBCTTS----------------
T ss_pred EEEEeCC-CCEEEEEeccCCC------c-------cccCCcCEEECCCCC-EEEEecCcccccc----------------
Confidence 9999998 776655 322110 0 011145788999996 5444422110000
Q ss_pred ceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEec----cCCeEEEEEEeecCceEEEEEEEC
Q 004067 271 EDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM----HGNILTAQVLNRSQTKLKVLKFDI 346 (776)
Q Consensus 271 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~S----pDg~~l~~~~~~~~~~~~l~~~d~ 346 (776)
++. .........|+.++.+ ++...+.. .......++|+ |||+.+++.... ...|++||+
T Consensus 143 -~~~---~~~~~~~~~l~~~~~~-g~~~~~~~---------~~~~~~~i~~~~~~d~dg~~l~v~~~~---~~~i~~~~~ 205 (314)
T 1pjx_A 143 -DYT---RSMQEKFGSIYCFTTD-GQMIQVDT---------AFQFPNGIAVRHMNDGRPYQLIVAETP---TKKLWSYDI 205 (314)
T ss_dssp -CCC---BTTSSSCEEEEEECTT-SCEEEEEE---------EESSEEEEEEEECTTSCEEEEEEEETT---TTEEEEEEE
T ss_pred -ccc---ccccCCCCeEEEECCC-CCEEEecc---------CCCCcceEEEecccCCCCCEEEEEECC---CCeEEEEEC
Confidence 000 0001122568888887 55544421 11234568999 999866655322 245888887
Q ss_pred C-CCceEE--EEEeccCceeecccccccCCCCccccCCeEEEEec-cCCceEEEEEeCCCce-eeccccCCeEEEEEEee
Q 004067 347 K-TGQRKV--ILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASE-KTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGV 421 (776)
Q Consensus 347 ~-~g~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~g~~~l~~~~~~g~~-~~~lt~~~~~~~~~~~~ 421 (776)
+ +|.... +....... .+ ..+.++..++++.+|+++ .++ .|+++++++++ ...+......+..+. +
T Consensus 206 ~~~g~~~~~~~~~~~~~~------~~-~~p~~i~~d~~G~l~v~~~~~~--~i~~~d~~~g~~~~~~~~~~~~~~~i~-~ 275 (314)
T 1pjx_A 206 KGPAKIENKKVWGHIPGT------HE-GGADGMDFDEDNNLLVANWGSS--HIEVFGPDGGQPKMRIRCPFEKPSNLH-F 275 (314)
T ss_dssp EETTEEEEEEEEEECCCC------SS-CEEEEEEEBTTCCEEEEEETTT--EEEEECTTCBSCSEEEECSSSCEEEEE-E
T ss_pred CCCCccccceEEEECCCC------CC-CCCCceEECCCCCEEEEEcCCC--EEEEEcCCCCcEeEEEeCCCCCceeEE-E
Confidence 6 454321 11110000 00 001112334444445443 344 89999998443 344443333344544 7
Q ss_pred cCCCcEEEEEEccCCCceeeEEEEEeC
Q 004067 422 NEASGQVYFTGTLDGPLESHLYCAKLY 448 (776)
Q Consensus 422 s~dg~~i~~~~~~~~~~~~~l~~~~~~ 448 (776)
++||+.||+.....+ .|+++++.
T Consensus 276 ~~dg~~l~v~~~~~~----~l~~~~~~ 298 (314)
T 1pjx_A 276 KPQTKTIFVTEHENN----AVWKFEWQ 298 (314)
T ss_dssp CTTSSEEEEEETTTT----EEEEEECS
T ss_pred CCCCCEEEEEeCCCC----eEEEEeCC
Confidence 999998888876543 57777774
No 440
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.73 E-value=2.6e-06 Score=89.67 Aligned_cols=225 Identities=12% Similarity=0.098 Sum_probs=141.6
Q ss_pred ceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEe--CCCcEEEEeCCCC
Q 004067 81 RKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCS 158 (776)
Q Consensus 81 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~ 158 (776)
..|+++++++++...+... ......+.|++ ++..|+++ ..+.|++++++++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~------------------------~~~~~gl~~d~---~~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN------------------------LENAIALDFHH---RRELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp SCEEEECTTSCCCEEEECS------------------------CSCEEEEEEET---TTTEEEEEETTTTEEEEEETTSC
T ss_pred ccceeeccCCCcEEEEecC------------------------CCccEEEEEec---CCCeEEEEeCCCCcEEEEecCCC
Confidence 3699999998877666531 13467889998 88888887 5678999999998
Q ss_pred ccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEEC
Q 004067 159 KPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWS 236 (776)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws 236 (776)
..+ .+..........+++.+.+..|.++.. +.|+++++++...+.+...+. ....+++..
T Consensus 149 ~~~-~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l-----------------~~P~giavd 210 (386)
T 3v65_B 149 NVE-EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL-----------------EKPRAIALH 210 (386)
T ss_dssp CEE-EEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSC-----------------SCEEEEEEE
T ss_pred CcE-EEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCC-----------------CCCcEEEEE
Confidence 765 332222122466888888888777754 468888888766555543221 113477899
Q ss_pred CCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceE
Q 004067 237 LDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYL 316 (776)
Q Consensus 237 pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 316 (776)
|++..|++..... ...|+++++++...+.+-. .....-
T Consensus 211 p~~g~ly~td~~~----------------------------------~~~I~r~~~dG~~~~~~~~--------~~~~~P 248 (386)
T 3v65_B 211 PMEGTIYWTDWGN----------------------------------TPRIEASSMDGSGRRIIAD--------THLFWP 248 (386)
T ss_dssp TTTTEEEEEECSS----------------------------------SCEEEEEETTSCSCEEEEC--------SSCSCE
T ss_pred cCCCeEEEeccCC----------------------------------CCEEEEEeCCCCCcEEEEE--------CCCCCe
Confidence 9988887654211 1357888888776655522 122345
Q ss_pred EEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEE
Q 004067 317 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 396 (776)
Q Consensus 317 ~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~ 396 (776)
..++|+|+++.|+++.. ....|+++|++++..+.+..... ..+.+++.+.+.+||+....+ .|.
T Consensus 249 nGlavd~~~~~lY~aD~---~~~~I~~~d~dG~~~~~~~~~~~-----------~~P~giav~~~~ly~td~~~~--~V~ 312 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDA---KHHVIERANLDGSHRKAVISQGL-----------PHPFAITVFEDSLYWTDWHTK--SIN 312 (386)
T ss_dssp EEEEEEGGGTEEEEEET---TTTEEEEECTTSCSCEEEECSSC-----------SSEEEEEEETTEEEEEETTTT--EEE
T ss_pred eeEEEeCCCCEEEEEEC---CCCEEEEEeCCCCeeEEEEECCC-----------CCceEEEEECCEEEEeeCCCC--eEE
Confidence 67999998877777643 23469999998766655543211 111122334455555543333 788
Q ss_pred EEe-CCCceeecc
Q 004067 397 LHD-INGTCLGPI 408 (776)
Q Consensus 397 ~~~-~~g~~~~~l 408 (776)
+++ .+|...+.|
T Consensus 313 ~~~~~~G~~~~~i 325 (386)
T 3v65_B 313 SANKFTGKNQEII 325 (386)
T ss_dssp EEETTTCCSCEEE
T ss_pred EEECCCCcceEEE
Confidence 887 445444444
No 441
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.73 E-value=5.5e-06 Score=85.87 Aligned_cols=225 Identities=12% Similarity=0.109 Sum_probs=140.3
Q ss_pred ceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEe--CCCcEEEEeCCCC
Q 004067 81 RKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCS 158 (776)
Q Consensus 81 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~ 158 (776)
..|+++++++.+...+... ......+.|++ .++.|+++ ..+.|++++++++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~------------------------~~~~~~l~~d~---~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN------------------------LENAIALDFHH---RRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp SCEEEECTTSCCEEEEECS------------------------CSCEEEEEEET---TTTEEEEEETTTTEEEEEETTSC
T ss_pred cceEEEeCCCCeeEEeecC------------------------CCceEEEEEec---cccEEEEEeccCCceEEEecCCC
Confidence 3599999998877666531 13466789998 88889887 4678999999998
Q ss_pred ccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEEC
Q 004067 159 KPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWS 236 (776)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws 236 (776)
..+ .+..........+++.+.+..|.++.. +.|+++++++...+.+..... ....++++.
T Consensus 106 ~~~-~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l-----------------~~P~~iavd 167 (349)
T 3v64_C 106 NVE-EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL-----------------EKPRAIALH 167 (349)
T ss_dssp SCE-EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTC-----------------SCEEEEEEE
T ss_pred Cce-EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCC-----------------CCcceEEEe
Confidence 766 432221122456788888888877754 468999988766555543221 113478899
Q ss_pred CCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceE
Q 004067 237 LDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYL 316 (776)
Q Consensus 237 pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 316 (776)
|++..|++..... ...|+++++++...+.+- ......-
T Consensus 168 p~~g~ly~td~~~----------------------------------~~~I~r~~~dG~~~~~~~--------~~~~~~P 205 (349)
T 3v64_C 168 PMEGTIYWTDWGN----------------------------------TPRIEASSMDGSGRRIIA--------DTHLFWP 205 (349)
T ss_dssp TTTTEEEEEECSS----------------------------------SCEEEEEETTSCSCEESC--------CSSCSCE
T ss_pred cCcCeEEEeccCC----------------------------------CCEEEEEeCCCCCcEEEE--------ECCCCCc
Confidence 9888887654211 135788888876655441 1123345
Q ss_pred EEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEE
Q 004067 317 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 396 (776)
Q Consensus 317 ~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~ 396 (776)
..++|+|+++.|+++.. ....|+.+|++++..+.+...... .| .+++.+.+.+||+....+ .|.
T Consensus 206 nGla~d~~~~~lY~aD~---~~~~I~~~~~dG~~~~~~~~~~~~---------~P--~giav~~~~ly~td~~~~--~V~ 269 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDA---KHHVIERANLDGSHRKAVISQGLP---------HP--FAITVFEDSLYWTDWHTK--SIN 269 (349)
T ss_dssp EEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCS---------SE--EEEEEETTEEEEEETTTT--EEE
T ss_pred ceEEEeCCCCEEEEEEC---CCCEEEEEeCCCCceEEEEeCCCC---------Cc--eEEEEECCEEEEecCCCC--eEE
Confidence 67999998877777643 234699999987666555432110 11 122233445555543344 677
Q ss_pred EEe-CCCceeecc
Q 004067 397 LHD-INGTCLGPI 408 (776)
Q Consensus 397 ~~~-~~g~~~~~l 408 (776)
+++ .+|+..+.|
T Consensus 270 ~~~~~~G~~~~~i 282 (349)
T 3v64_C 270 SANKFTGKNQEII 282 (349)
T ss_dssp EEETTTCCSCEEE
T ss_pred EEEccCCCccEEe
Confidence 777 444443333
No 442
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.69 E-value=2.2e-05 Score=79.27 Aligned_cols=272 Identities=10% Similarity=0.035 Sum_probs=152.5
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.+..+.++|||+. .+..... ..|+++|++ ++...+..... ...+....+++
T Consensus 16 ~~~~i~~d~~g~l-~v~~~~~----~~v~~~d~~-~~~~~~~~~~~----------------------~~~~~~i~~~~- 66 (299)
T 2z2n_A 16 GPYGITVSDKGKV-WITQHKA----NMISCINLD-GKITEYPLPTP----------------------DAKVMCLTISS- 66 (299)
T ss_dssp CEEEEEECTTSCE-EEEETTT----TEEEEECTT-CCEEEEECSST----------------------TCCEEEEEECT-
T ss_pred CccceEECCCCCE-EEEecCC----CcEEEEcCC-CCeEEecCCcc----------------------cCceeeEEECC-
Confidence 3578899999983 3333222 469999998 66554442100 13567788889
Q ss_pred CCCceEEEEeC-CCcEEEEeCCCCccceecC-CCCCCCccCceeCCCCCEEEEEE-CCcEEEEecCCCceeEEeeCCCCC
Q 004067 136 SSKKKIIMVPL-PDGIYFQDLSCSKPELKLS-SSSCSPVIDPHLSSDGTMIAFVR-DCELHVLNLLINEQRQLTHGANGN 212 (776)
Q Consensus 136 ~~dg~~l~~~~-~~~l~~~d~~~~~~~~~l~-~~~~~~~~~~~~SpDg~~la~~~-~~~l~~~~l~~g~~~~lt~~~~~~ 212 (776)
||+..+... ++.|+++|.++. .+ .+. .........+.++|||+..+-.. .+.|+++++ +++.+.+......
T Consensus 67 --~g~l~v~~~~~~~i~~~~~~g~-~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~- 140 (299)
T 2z2n_A 67 --DGEVWFTENAANKIGRITKKGI-IK-EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKG- 140 (299)
T ss_dssp --TSCEEEEETTTTEEEEECTTSC-EE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT-
T ss_pred --CCCEEEeCCCCCeEEEECCCCc-EE-EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCC-
Confidence 998555544 567999998743 33 222 11222356788899986433222 346999998 6666554322110
Q ss_pred ceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEc
Q 004067 213 TVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 292 (776)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~ 292 (776)
.....++++|||+ |++..... ..|+++|.
T Consensus 141 ---------------~~~~~i~~~~~g~-l~v~~~~~-----------------------------------~~i~~~~~ 169 (299)
T 2z2n_A 141 ---------------SYPSFITLGSDNA-LWFTENQN-----------------------------------NAIGRITE 169 (299)
T ss_dssp ---------------CCEEEEEECTTSC-EEEEETTT-----------------------------------TEEEEECT
T ss_pred ---------------CCCceEEEcCCCC-EEEEeCCC-----------------------------------CEEEEEcC
Confidence 0134678899985 54433111 24788888
Q ss_pred CCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccC
Q 004067 293 AGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPL 372 (776)
Q Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~ 372 (776)
+++...+..+ ........+.+++||++ ++.. . ....|+++|+ ++..+.+....... .
T Consensus 170 -~g~~~~~~~~-------~~~~~~~~i~~~~~g~l-~v~~-~--~~~~i~~~~~-~g~~~~~~~~~~~~----------~ 226 (299)
T 2z2n_A 170 -SGDITEFKIP-------TPASGPVGITKGNDDAL-WFVE-I--IGNKIGRITT-SGEITEFKIPTPNA----------R 226 (299)
T ss_dssp -TCCEEEEECS-------STTCCEEEEEECTTSSE-EEEE-T--TTTEEEEECT-TCCEEEEECSSTTC----------C
T ss_pred -CCcEEEeeCC-------CCCCcceeEEECCCCCE-EEEc-c--CCceEEEECC-CCcEEEEECCCCCC----------C
Confidence 6666655332 22345677899999983 3332 1 2335899999 77765432211000 0
Q ss_pred CCCccccCCeEEEEec-cCCceEEEEEeCCCceeeccc--cCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 373 DKGVTKYSGGFIWASE-KTGFRHLYLHDINGTCLGPIT--EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 373 ~~~~~~~~~~~~~~s~-~~g~~~l~~~~~~g~~~~~lt--~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
...+..++++-+|+++ ..+ .|+++++++ ....+. .+...+..+. + ++|+ ||+.... ..|++++.
T Consensus 227 ~~~i~~~~~g~l~v~~~~~~--~i~~~d~~g-~~~~~~~~~~~~~~~~i~-~-~~g~-l~v~~~~-----~~l~~~~~ 293 (299)
T 2z2n_A 227 PHAITAGAGIDLWFTEWGAN--KIGRLTSNN-IIEEYPIQIKSAEPHGIC-F-DGET-IWFAMEC-----DKIGKLTL 293 (299)
T ss_dssp EEEEEECSTTCEEEEETTTT--EEEEEETTT-EEEEEECSSSSCCEEEEE-E-CSSC-EEEEETT-----TEEEEEEE
T ss_pred ceeEEECCCCCEEEeccCCc--eEEEECCCC-ceEEEeCCCCCCccceEE-e-cCCC-EEEEecC-----CcEEEEEc
Confidence 0112233333344443 344 799999854 444442 2223344544 5 6666 5666442 25777776
No 443
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.68 E-value=7.4e-08 Score=84.24 Aligned_cols=95 Identities=17% Similarity=-0.024 Sum_probs=63.2
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh
Q 004067 532 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 611 (776)
Q Consensus 532 ~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~ 611 (776)
.+|.++++....+ .|+||++| + .. ..|.. . +++ +|.|+++|+||+|.+......
T Consensus 9 ~~g~~~~~~~~g~---------~~~vv~~H-~--~~---~~~~~----~---l~~-~~~v~~~d~~G~G~s~~~~~~--- 62 (131)
T 2dst_A 9 LYGLNLVFDRVGK---------GPPVLLVA-E--EA---SRWPE----A---LPE-GYAFYLLDLPGYGRTEGPRMA--- 62 (131)
T ss_dssp ETTEEEEEEEECC---------SSEEEEES-S--SG---GGCCS----C---CCT-TSEEEEECCTTSTTCCCCCCC---
T ss_pred ECCEEEEEEEcCC---------CCeEEEEc-C--CH---HHHHH----H---HhC-CcEEEEECCCCCCCCCCCCCC---
Confidence 3777777665432 26799999 2 11 12321 1 444 599999999999987543211
Q ss_pred hccCCccHHHHHHHHHHHHHcCCCCCCcEEEEeechHHHHHHHHHhhCCC
Q 004067 612 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD 661 (776)
Q Consensus 612 ~~~~~~~~~D~~~~i~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~~~ 661 (776)
.+++.+.+..+.+.. +.+++.++||||||.+++.++.++|.
T Consensus 63 -------~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 63 -------PEELAHFVAGFAVMM--NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp -------HHHHHHHHHHHHHHT--TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred -------HHHHHHHHHHHHHHc--CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 444444444444432 34589999999999999999999886
No 444
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.67 E-value=2.9e-08 Score=109.29 Aligned_cols=130 Identities=18% Similarity=0.242 Sum_probs=83.6
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCccccccc--ccccchhhhHHHH-hCCcEEEEECCCCC----CCCchhhhhh
Q 004067 537 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDS--WINTVDMRAQYLR-SKGILVWKLDNRGT----ARRGLKFEAS 609 (776)
Q Consensus 537 l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~--~~~~~~~~~~~l~-~~G~~v~~~d~rg~----g~~~~~~~~~ 609 (776)
+...+|.|.......+++|+||++|||+........ +...+......|+ ..|++|+.+|||.. ...+.
T Consensus 81 l~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~----- 155 (579)
T 2bce_A 81 LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGD----- 155 (579)
T ss_dssp CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSS-----
T ss_pred CEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCC-----
Confidence 566677886531123578999999998643321110 0000011133444 45799999999931 11110
Q ss_pred hhhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhh--CCCceEEEEEcCCC
Q 004067 610 IKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPV 672 (776)
Q Consensus 610 ~~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~--~~~~~~~~v~~~~~ 672 (776)
....+...+.|+..+++|+.++ ...|+++|.|+|+|.||+++..++.. ...+|+++|+.++.
T Consensus 156 -~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 156 -SNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp -TTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred -CCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 0111222478999999999875 34799999999999999999988764 35689999988774
No 445
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.67 E-value=5.1e-08 Score=107.97 Aligned_cols=118 Identities=15% Similarity=0.111 Sum_probs=78.7
Q ss_pred CCceEEEEEcCCCCcccccccccccchhhhHHHH-hCCcEEEEECCCC----CCCCchhhhh-hhhhccCCccHHHHHHH
Q 004067 552 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRG----TARRGLKFEA-SIKHNCGRIDAEDQLTG 625 (776)
Q Consensus 552 ~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rg----~g~~~~~~~~-~~~~~~~~~~~~D~~~~ 625 (776)
+++|+||++|||+......... ......|+ ..|++|+.+|||- +......+.. ......+...+.|+..+
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~----~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~a 214 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLD----IYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALA 214 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCG----GGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCCCC----CCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHH
Confidence 5789999999986543211111 11134555 4799999999992 2211111100 01111233458899999
Q ss_pred HHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhC--CCceEEEEEcCCCC
Q 004067 626 AEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 673 (776)
Q Consensus 626 i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~--~~~~~~~v~~~~~~ 673 (776)
++|+.++ ...|+++|.|+|+|+||++++.++... ..+|+++|+.+|..
T Consensus 215 l~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 215 IRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 9999986 246899999999999999998887752 46899999988754
No 446
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.66 E-value=4.8e-06 Score=83.16 Aligned_cols=195 Identities=7% Similarity=-0.006 Sum_probs=113.1
Q ss_pred ceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECCcEEEEecCCCce-eEEeeCCCCCceec
Q 004067 139 KKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINEQ-RQLTHGANGNTVTH 216 (776)
Q Consensus 139 g~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~~-~~lt~~~~~~~~~~ 216 (776)
++.|+.. .++.|+++|.++|+....+............++|||+.++ ..++.|+.++. +|+. .++.. +....
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~-~~~~~--- 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAA-PAGCE--- 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEEC-CTTCE---
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcC-CCCcc---
Confidence 5555554 6778999999888876455443212367789999999776 55677999999 5554 33332 21100
Q ss_pred CCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCc
Q 004067 217 GLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 296 (776)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 296 (776)
.....++|||+.|+....+. ..++.+|.+++.
T Consensus 79 -------------~~~~~~~~dG~~lv~~~~~~-----------------------------------~~v~~vd~~Gk~ 110 (276)
T 3no2_A 79 -------------MQTARILPDGNALVAWCGHP-----------------------------------STILEVNMKGEV 110 (276)
T ss_dssp -------------EEEEEECTTSCEEEEEESTT-----------------------------------EEEEEECTTSCE
T ss_pred -------------ccccEECCCCCEEEEecCCC-----------------------------------CEEEEEeCCCCE
Confidence 23567899999776544211 456777776665
Q ss_pred eEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCc
Q 004067 297 VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGV 376 (776)
Q Consensus 297 ~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 376 (776)
+..+....+. .........+++++||++++... ....|+.+|++ |+..--.......+. .
T Consensus 111 l~~~~~~~~~---~~~~~~~~~v~~~~~G~~lv~~~----~~~~v~~~d~~-G~~~w~~~~~~~~~~------------~ 170 (276)
T 3no2_A 111 LSKTEFETGI---ERPHAQFRQINKNKKGNYLVPLF----ATSEVREIAPN-GQLLNSVKLSGTPFS------------S 170 (276)
T ss_dssp EEEEEECCSC---SSGGGSCSCCEECTTSCEEEEET----TTTEEEEECTT-SCEEEEEECSSCCCE------------E
T ss_pred EEEEeccCCC---CcccccccCceECCCCCEEEEec----CCCEEEEECCC-CCEEEEEECCCCccc------------e
Confidence 6555443110 01111222356799998765432 34569999998 665443332211111 0
Q ss_pred ccc-CCeEEEEeccCCceEEEEEeCC-Cceeeccc
Q 004067 377 TKY-SGGFIWASEKTGFRHLYLHDIN-GTCLGPIT 409 (776)
Q Consensus 377 ~~~-~~~~~~~s~~~g~~~l~~~~~~-g~~~~~lt 409 (776)
... ++.+++....++ .|+.+|++ |....++.
T Consensus 171 ~~~~~g~~~v~~~~~~--~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 171 AFLDNGDCLVACGDAH--CFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EECTTSCEEEECBTTS--EEEEECTTTCCEEEEEE
T ss_pred eEcCCCCEEEEeCCCC--eEEEEeCcCCcEEEEec
Confidence 112 344555554444 79999999 44444454
No 447
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.65 E-value=4.5e-06 Score=83.33 Aligned_cols=188 Identities=6% Similarity=0.003 Sum_probs=115.7
Q ss_pred cceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEeCCCcEEEEeCCCCc
Q 004067 80 SRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSK 159 (776)
Q Consensus 80 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~ 159 (776)
...|+++|.++|+...-+.... ........++| ||+.++ ..+..|+.+|.++..
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~----------------------~~~~~~~~~~p---dG~ilv-s~~~~V~~~d~~G~~ 67 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEK----------------------GWECNSVAATK---AGEILF-SYSKGAKMITRDGRE 67 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCT----------------------TCCCCEEEECT---TSCEEE-ECBSEEEEECTTSCE
T ss_pred CCEEEEEECCCCeEEEEeCCCc----------------------cCCCcCeEECC---CCCEEE-eCCCCEEEECCCCCE
Confidence 3579999998887644332111 02466778899 998766 667889999995443
Q ss_pred cceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECC
Q 004067 160 PELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSL 237 (776)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp 237 (776)
.. .+.......+..+.++|||+.++.... ..++.++.++....++...... .+. ......++..+
T Consensus 68 ~W-~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~----~~~--------~~~~~~v~~~~ 134 (276)
T 3no2_A 68 LW-NIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI----ERP--------HAQFRQINKNK 134 (276)
T ss_dssp EE-EEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSC----SSG--------GGSCSCCEECT
T ss_pred EE-EEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCC----Ccc--------cccccCceECC
Confidence 43 555432223567889999998887765 3588888765555555433210 000 00123456889
Q ss_pred CCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEE
Q 004067 238 DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLA 317 (776)
Q Consensus 238 Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 317 (776)
||+.|+....+ ..|+.+|.++.....+... ....
T Consensus 135 ~G~~lv~~~~~------------------------------------~~v~~~d~~G~~~w~~~~~----------~~~~ 168 (276)
T 3no2_A 135 KGNYLVPLFAT------------------------------------SEVREIAPNGQLLNSVKLS----------GTPF 168 (276)
T ss_dssp TSCEEEEETTT------------------------------------TEEEEECTTSCEEEEEECS----------SCCC
T ss_pred CCCEEEEecCC------------------------------------CEEEEECCCCCEEEEEECC----------CCcc
Confidence 99976543211 3478899884444444331 1223
Q ss_pred EEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEE
Q 004067 318 RVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 356 (776)
Q Consensus 318 ~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 356 (776)
.....++|+.++... ....|+.+|+++|+..--..
T Consensus 169 ~~~~~~~g~~~v~~~----~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 169 SSAFLDNGDCLVACG----DAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEECTTSCEEEECB----TTSEEEEECTTTCCEEEEEE
T ss_pred ceeEcCCCCEEEEeC----CCCeEEEEeCcCCcEEEEec
Confidence 456789998665443 22359999999888654433
No 448
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.65 E-value=2.3e-05 Score=87.53 Aligned_cols=327 Identities=9% Similarity=0.043 Sum_probs=178.3
Q ss_pred cCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 55 VAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 55 ~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
..|..++++|++++|+|..... ..|++++++|...+.+.... + .++ ..+.+
T Consensus 171 ~~P~Glald~~~~~LY~aD~~~----~~I~~~~~dG~~~~~~~~~~--------------~------~~P---~gi~~-- 221 (619)
T 3s94_A 171 YWPNGLTLDYEEQKLYWADAKL----NFIHKSNLDGTNRQAVVKGS--------------L------PHP---FALTL-- 221 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTT----CCEEEESSSCCEEC-----------------------------C---CCEEE--
T ss_pred CCCcEEEEEccCCEEEEEeCCC----CeEEEecCCCCccEEEEeCC--------------C------CCc---eEEEE--
Confidence 3467889999999999886543 57999999987765554200 0 011 22333
Q ss_pred cCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCC-----------------------------------------
Q 004067 135 TSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSP----------------------------------------- 171 (776)
Q Consensus 135 ~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~----------------------------------------- 171 (776)
++..|+++ ....|+++|..+|+....+.......
T Consensus 222 ---~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~ 298 (619)
T 3s94_A 222 ---FEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCA 298 (619)
T ss_dssp ---SSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEE
T ss_pred ---eCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEe
Confidence 34477777 45679999987775431222110000
Q ss_pred -ccCceeCCCCC--------EEEEEECCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeE
Q 004067 172 -VIDPHLSSDGT--------MIAFVRDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFI 242 (776)
Q Consensus 172 -~~~~~~SpDg~--------~la~~~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l 242 (776)
.......+|++ .|+|....+|..++++++....+...-. + +....++.|.+.++.|
T Consensus 299 C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~------~---------l~~~~~ld~d~~~~~l 363 (619)
T 3s94_A 299 CPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLE------D---------IRHAIAIDYDPVEGYI 363 (619)
T ss_dssp CCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCS------C---------CSSEEEEEEETTTTEE
T ss_pred CCchheecccCcccCCCCceEEEEEcccceEEEecCCCccceeEEecc------c---------cCccEEEEEEcCCCeE
Confidence 00012233432 4666666778777777654332221100 0 1113367788877878
Q ss_pred EEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEec
Q 004067 243 AFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM 322 (776)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~S 322 (776)
++..... ..|+.++++++....+-. ........+++.
T Consensus 364 y~sD~~~-----------------------------------~~I~r~~~~g~~~~~v~~--------~~~~~p~GlAvD 400 (619)
T 3s94_A 364 YWTDDEV-----------------------------------RAIRRSFIDGSGSQFVVT--------AQIAHPDGIAVD 400 (619)
T ss_dssp EEEETTT-----------------------------------TEEEEEETTSCSCEEEEC--------SSCSCCCEEEEE
T ss_pred EEEeCCC-----------------------------------CeEEEEEcCCCccEEEEE--------CCCCCcCceEEe
Confidence 7754211 347788887765444422 111233457777
Q ss_pred cCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCC
Q 004067 323 HGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDIN 401 (776)
Q Consensus 323 pDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~ 401 (776)
+.++.|+++. . ....|.+.++++...+.+....-. .+.+++.++ .+.+|.++......|++.+++
T Consensus 401 ~~~~~lY~tD-~--~~~~I~v~~~~G~~~~~l~~~~l~-----------~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d 466 (619)
T 3s94_A 401 WVARNLYWTD-T--GTDRIEVTRLNGTMRKILISEDLE-----------EPRAIVLDPMVGYMYWTDWGEIPKIERAALD 466 (619)
T ss_dssp TTTTEEEEEE-T--TTTEEEEEETTSCSCEEEECTTCC-----------SEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred cccCcEEEEe-C--CCCcEEEEeCCCCeEEEEEECCCC-----------CeeeEEEEcCCCcEEEecCCCCCEEEEEccC
Confidence 6666666653 2 234688999987766665532110 011122233 245555654334689999999
Q ss_pred CceeeccccCCe-EEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC--CCeEEEEEcCCcCE
Q 004067 402 GTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRN 478 (776)
Q Consensus 402 g~~~~~lt~~~~-~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~--~~~~~~~~spdg~~ 478 (776)
|...+.|..... ...++ .++++++.||+..... ..|+++++ +|. ..+.+... ....++++.. .+
T Consensus 467 G~~~~~l~~~~l~~P~Gl-alD~~~~~LY~aD~~~----~~I~~~~~--dG~----~~~~~~~~~l~~P~glav~~--~~ 533 (619)
T 3s94_A 467 GSDRVVLVNTSLGWPNGL-ALDYDEGKIYWGDAKT----DKIEVMNT--DGT----GRRVLVEDKIPHIFGFTLLG--DY 533 (619)
T ss_dssp SCSCEEEECSSCSCEEEE-EEETTTTEEEEEETTT----TEEEEEES--SSC----CCEEEEECCCCSSCCEEEET--TE
T ss_pred CCccEEEEeCCCCCCeee-EEcccCCEEEEEECCC----CEEEEEec--CCC----ceEEEeccCCCCcEEEEEEC--CE
Confidence 987666654432 22333 4888888899987654 37899998 565 22233211 1223344433 34
Q ss_pred EEEEeeCCCCCCEEEEEEcCCCc
Q 004067 479 FVDFHDSLDSPPRILLCSLQDGS 501 (776)
Q Consensus 479 l~~~~~~~~~~~~i~~~~~~~~~ 501 (776)
|.++-.. ...|++.+..+|.
T Consensus 534 ly~tD~~---~~~I~~~~k~~g~ 553 (619)
T 3s94_A 534 VYWTDWQ---RRSIERVHKRSAE 553 (619)
T ss_dssp EEEECTT---SSCEEEEESSSCC
T ss_pred EEEeecC---CCeEEEEEcCCCc
Confidence 5444322 2357777776664
No 449
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.65 E-value=4.1e-06 Score=83.42 Aligned_cols=200 Identities=8% Similarity=0.007 Sum_probs=115.7
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.|..+.++|||+ |++..... ...|++++..++....+.... ......+.+++
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~---~~~i~~~~~~~~~~~~~~~~~-----------------------~~~p~~i~~~~- 76 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGM---YGRVVKLATGSTGTTVLPFNG-----------------------LYQPQGLAVDG- 76 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSS---SCEEEEECC-----EECCCCS-----------------------CCSCCCEEECT-
T ss_pred CccceEECCCCC-EEEEccCC---CCcEEEecCCCcccceEeeCC-----------------------cCCcceeEECC-
Confidence 457889999998 54414222 246999998776544332100 12455678999
Q ss_pred CCCceEEEEeCCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE--CCcEEEEecCCCceeEEeeCCCCCc
Q 004067 136 SSKKKIIMVPLPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR--DCELHVLNLLINEQRQLTHGANGNT 213 (776)
Q Consensus 136 ~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~~g~~~~lt~~~~~~~ 213 (776)
||+.++...++.|+++|.+++... .+..........+.++|||+ |.+.. ++.|++++..+..........
T Consensus 77 --~g~l~v~~~~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~---- 148 (270)
T 1rwi_B 77 --AGTVYVTDFNNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVLPFTG---- 148 (270)
T ss_dssp --TCCEEEEETTTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEECCCCS----
T ss_pred --CCCEEEEcCCCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEeecccc----
Confidence 998444435678999999887665 44322212356788999997 33332 246888865444332221111
Q ss_pred eecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 214 VTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
......++++|||+ |++..... ..|+++|.+
T Consensus 149 -------------~~~p~~i~~~~~g~-l~v~~~~~-----------------------------------~~i~~~~~~ 179 (270)
T 1rwi_B 149 -------------LNDPDGVAVDNSGN-VYVTDTDN-----------------------------------NRVVKLEAE 179 (270)
T ss_dssp -------------CCSCCCEEECTTCC-EEEEEGGG-----------------------------------TEEEEECTT
T ss_pred -------------CCCceeEEEeCCCC-EEEEECCC-----------------------------------CEEEEEecC
Confidence 01134788999997 54443211 247888888
Q ss_pred CCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceE
Q 004067 294 GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 352 (776)
Q Consensus 294 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~ 352 (776)
++....... ........+++++||. +++... ....|+++|+++....
T Consensus 180 ~~~~~~~~~--------~~~~~p~~i~~d~~g~-l~v~~~---~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 180 SNNQVVLPF--------TDITAPWGIAVDEAGT-VYVTEH---NTNQVVKLLAGSTTST 226 (270)
T ss_dssp TCCEEECCC--------SSCCSEEEEEECTTCC-EEEEET---TTSCEEEECTTCSCCE
T ss_pred CCceEeecc--------cCCCCceEEEECCCCC-EEEEEC---CCCcEEEEcCCCCcce
Confidence 776544311 1224567899999995 444432 2335899998776543
No 450
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.65 E-value=4.6e-06 Score=83.02 Aligned_cols=200 Identities=8% Similarity=-0.040 Sum_probs=128.2
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.|+|+++.|++..... ..|++++++++..+.+.... ........++|
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~----~~I~~~~~~g~~~~~~~~~~-----------------------~~~p~~ia~d~-- 88 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISE----PSIGRASLHGGEPTTIIRQD-----------------------LGSPEGIALDH-- 88 (267)
T ss_dssp EEEEEEETTTTEEEEEETTT----TEEEEEESSSCCCEEEECTT-----------------------CCCEEEEEEET--
T ss_pred EEEEEEecCCCEEEEEECCC----CEEEEEecCCCCcEEEEECC-----------------------CCCccEEEEEe--
Confidence 47889999999999886643 47999999988765554311 12456788999
Q ss_pred CCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC----CcEEEEecCCCceeEEeeCCC
Q 004067 137 SKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD----CELHVLNLLINEQRQLTHGAN 210 (776)
Q Consensus 137 ~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~----~~l~~~~l~~g~~~~lt~~~~ 210 (776)
++..|+++ ..+.|+++++++...+ .+..........++++|++..|.+... +.|+++++++...+.+...+.
T Consensus 89 -~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~ 166 (267)
T 1npe_A 89 -LGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNL 166 (267)
T ss_dssp -TTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTC
T ss_pred -cCCeEEEEECCCCEEEEEEcCCCCEE-EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCC
Confidence 98888887 4567999999887655 333222123566789998888777653 368888887655444432211
Q ss_pred CCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEE
Q 004067 211 GNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVV 290 (776)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~ 290 (776)
....+++++||+++|++..... ..|+++
T Consensus 167 -----------------~~P~gia~d~~~~~lyv~d~~~-----------------------------------~~I~~~ 194 (267)
T 1npe_A 167 -----------------GLPNGLTFDAFSSQLCWVDAGT-----------------------------------HRAECL 194 (267)
T ss_dssp -----------------SCEEEEEEETTTTEEEEEETTT-----------------------------------TEEEEE
T ss_pred -----------------CCCcEEEEcCCCCEEEEEECCC-----------------------------------CEEEEE
Confidence 1134788999999887654211 347888
Q ss_pred EcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEE
Q 004067 291 SAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV 353 (776)
Q Consensus 291 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~ 353 (776)
|++++....+.. ....-..++ +|+..++++. .. ...|+++|+++|+...
T Consensus 195 ~~~g~~~~~~~~---------~~~~P~gi~--~d~~~lyva~-~~--~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 195 NPAQPGRRKVLE---------GLQYPFAVT--SYGKNLYYTD-WK--TNSVIAMDLAISKEMD 243 (267)
T ss_dssp ETTEEEEEEEEE---------CCCSEEEEE--EETTEEEEEE-TT--TTEEEEEETTTTEEEE
T ss_pred ecCCCceEEEec---------CCCCceEEE--EeCCEEEEEE-CC--CCeEEEEeCCCCCceE
Confidence 887665444321 111122333 4555565543 22 2358999999887543
No 451
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.65 E-value=4.1e-06 Score=84.28 Aligned_cols=237 Identities=12% Similarity=0.027 Sum_probs=131.0
Q ss_pred CeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCC-----CCCccCcee-CCCCCEEEEEE---CCcEEEE
Q 004067 126 GVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSS-----CSPVIDPHL-SSDGTMIAFVR---DCELHVL 195 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~-----~~~~~~~~~-SpDg~~la~~~---~~~l~~~ 195 (776)
......+++ ||+.++.. .++.|++||.++.... .+.... ......+++ +++|+ |.+.. ++.|+++
T Consensus 31 ~p~~v~~~~---~g~l~v~~~~~~~i~~~d~~g~~~~-~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 31 EPSGVAVNA---QNDIIVADTNNHRIQIFDKEGRFKF-QFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSPTHQIQIY 105 (286)
T ss_dssp CEEEEEECT---TCCEEEEEGGGTEEEEECTTSCEEE-EECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGGGCEEEEE
T ss_pred CCceEEECC---CCCEEEEECCCCEEEEECCCCcEEE-EecccCCCcccccCceEEEEEcCCCe-EEEEcCCCCCEEEEE
Confidence 456778899 99855443 5678999999865544 443211 112345677 45665 44443 4568888
Q ss_pred ecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecC
Q 004067 196 NLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 275 (776)
Q Consensus 196 ~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (776)
+.++...+.+..... .....++++|||+ |++.....
T Consensus 106 d~~g~~~~~~~~~~~-----------------~~~~~i~~~~~g~-l~v~~~~~-------------------------- 141 (286)
T 1q7f_A 106 NQYGQFVRKFGATIL-----------------QHPRGVTVDNKGR-IIVVECKV-------------------------- 141 (286)
T ss_dssp CTTSCEEEEECTTTC-----------------SCEEEEEECTTSC-EEEEETTT--------------------------
T ss_pred CCCCcEEEEecCccC-----------------CCceEEEEeCCCC-EEEEECCC--------------------------
Confidence 854443333321110 0134678999997 54433111
Q ss_pred CCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEE
Q 004067 276 PFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 355 (776)
Q Consensus 276 ~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~ 355 (776)
..|++||.++.....+.. .........++++|||+ ++++. . ....|++||.++.....+.
T Consensus 142 ---------~~i~~~~~~g~~~~~~~~-------~~~~~~p~~i~~~~~g~-l~v~~-~--~~~~i~~~~~~g~~~~~~~ 201 (286)
T 1q7f_A 142 ---------MRVIIFDQNGNVLHKFGC-------SKHLEFPNGVVVNDKQE-IFISD-N--RAHCVKVFNYEGQYLRQIG 201 (286)
T ss_dssp ---------TEEEEECTTSCEEEEEEC-------TTTCSSEEEEEECSSSE-EEEEE-G--GGTEEEEEETTCCEEEEES
T ss_pred ---------CEEEEEcCCCCEEEEeCC-------CCccCCcEEEEECCCCC-EEEEE-C--CCCEEEEEcCCCCEEEEEc
Confidence 347888876655555432 12233567899999998 33332 2 2346999998654444332
Q ss_pred EeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccCCe--EEEEEEeecCCCcEEEEEEc
Q 004067 356 VEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW--MVEQIVGVNEASGQVYFTGT 433 (776)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~--~~~~~~~~s~dg~~i~~~~~ 433 (776)
.. .. + ..+.++..++++-+|+++......|.+|+.++.....+..+.. ....+ .++++|+ +|++.
T Consensus 202 ~~-g~--------~-~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~g~-l~vs~- 268 (286)
T 1q7f_A 202 GE-GI--------T-NYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDV-ALMDDGS-VVLAS- 268 (286)
T ss_dssp CT-TT--------S-CSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEE-EEETTTE-EEEEE-
T ss_pred cC-Cc--------c-CCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeE-EECCCCc-EEEEC-
Confidence 11 00 0 0011223344444555544332389999988877666654321 13344 4899987 66664
Q ss_pred cCCCceeeEEEEE
Q 004067 434 LDGPLESHLYCAK 446 (776)
Q Consensus 434 ~~~~~~~~l~~~~ 446 (776)
.+ ..+.+|++.
T Consensus 269 ~~--~~v~v~~~~ 279 (286)
T 1q7f_A 269 KD--YRLYIYRYV 279 (286)
T ss_dssp TT--TEEEEEECS
T ss_pred CC--CeEEEEEcc
Confidence 33 346677653
No 452
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.63 E-value=0.00018 Score=80.38 Aligned_cols=336 Identities=7% Similarity=-0.028 Sum_probs=180.6
Q ss_pred cCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEee
Q 004067 55 VAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVK 134 (776)
Q Consensus 55 ~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp 134 (776)
..|..+++++++++|+|..... ..|++++++|+..+.+... .-..+..+-
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~----~~I~~~d~dG~~~~v~~~~--------------------------l~~P~glav 215 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDT----NLIESSNMLGLNREVIADD--------------------------LPHPFGLTQ 215 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTT----TEEEEEETTSCSCEEEEEC--------------------------CSCEEEEEE
T ss_pred CCcceEEEccccCEEEEEECCC----CEEEEEcCCCCceEEeecc--------------------------CCCceEEEE
Confidence 4468899999999999887644 5799999998776544321 112233444
Q ss_pred cCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCC-------------------CC---------------------c
Q 004067 135 TSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSC-------------------SP---------------------V 172 (776)
Q Consensus 135 ~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~-------------------~~---------------------~ 172 (776)
++.+|+++ ..+.|+.+|..+|+.+..+..... .. .
T Consensus 216 ---~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~ 292 (628)
T 4a0p_A 216 ---YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCP 292 (628)
T ss_dssp ---ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECS
T ss_pred ---ECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcC
Confidence 55677777 457789999766654312211000 00 0
Q ss_pred cCceeCCCCC-------EEEEEECCcEEEEecCCCcee--EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEE
Q 004067 173 IDPHLSSDGT-------MIAFVRDCELHVLNLLINEQR--QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIA 243 (776)
Q Consensus 173 ~~~~~SpDg~-------~la~~~~~~l~~~~l~~g~~~--~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~ 243 (776)
......+|++ .|+|.....|..+.++..... .+... .+....++.|.+.++.|+
T Consensus 293 ~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~-----------------~~~~~~~ld~d~~~~~iy 355 (628)
T 4a0p_A 293 AHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIH-----------------SLRNVRAIDYDPLDKQLY 355 (628)
T ss_dssp TTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCT-----------------TCSCEEEEEEETTTTEEE
T ss_pred CCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEeh-----------------hcCCceEEEEecCCCeEE
Confidence 0112234442 344555555555555432110 01000 111134677888777777
Q ss_pred EEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEecc
Q 004067 244 FTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH 323 (776)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Sp 323 (776)
+..... ..|+.+++++.....+-.... ...........+++..
T Consensus 356 ~sD~~~-----------------------------------~~I~r~~~~g~~~~~v~~~~~--~~~~~~~~p~glAvD~ 398 (628)
T 4a0p_A 356 WIDSRQ-----------------------------------NMIRKAQEDGSQGFTVVVSSV--PSQNLEIQPYDLSIDI 398 (628)
T ss_dssp EEETTT-----------------------------------TEEEEEETTSCSCEEEEC----------CCCEEEEEEET
T ss_pred EEecCc-----------------------------------ceEEEEEcCCCCceEEEEccc--ccccccCCcceEEeec
Confidence 653211 235666766554333311000 0001223456788888
Q ss_pred CCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccC-CeEEEEeccCCce-EEEEEeCC
Q 004067 324 GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFR-HLYLHDIN 401 (776)
Q Consensus 324 Dg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~-~l~~~~~~ 401 (776)
.++.|+++.. ....|.+.++++...+.+...... .+.+++-++ .+.+|.++..... .|++.+++
T Consensus 399 ~~~nLY~td~---~~~~I~v~~~~G~~~~~l~~~~l~-----------~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d 464 (628)
T 4a0p_A 399 YSRYIYWTCE---ATNVINVTRLDGRSVGVVLKGEQD-----------RPRAVVVNPEKGYMYFTNLQERSPKIERAALD 464 (628)
T ss_dssp TTTEEEEEET---TTTEEEEEETTSCEEEEEEECTTC-----------CEEEEEEETTTTEEEEEEEETTEEEEEEEETT
T ss_pred cCCeEEEEcC---CCCEEEEEECCCCeEEEEEeCCCC-----------ceeeEEEecCCCeEEEeecCCCCCeEEEEeCC
Confidence 8877766642 233588888876544455432111 011122233 3455555554333 89999999
Q ss_pred CceeeccccCCeE-EEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC--CCeEEEEEcCCcCE
Q 004067 402 GTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRN 478 (776)
Q Consensus 402 g~~~~~lt~~~~~-~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~--~~~~~~~~spdg~~ 478 (776)
|...+.|...+.. ..+ +.++++++.||+..... ..|+++++ +|. ..+.+... ....++++. +..
T Consensus 465 G~~~~~l~~~~l~~P~g-la~D~~~~~LYw~D~~~----~~I~~~~~--dG~----~r~~~~~~~~~~P~glav~--~~~ 531 (628)
T 4a0p_A 465 GTEREVLFFSGLSKPIA-LALDSRLGKLFWADSDL----RRIESSDL--SGA----NRIVLEDSNILQPVGLTVF--ENW 531 (628)
T ss_dssp SCSCEEEECSSCSCEEE-EEEETTTTEEEEEETTT----TEEEEEET--TSC----SCEEEECSSCSCEEEEEEE--TTE
T ss_pred CCCcEEEEeccCCCccE-EEEeCCCCEEEEEeCCC----CEEEEEeC--CCC----ceEEEEcCCCCCcEEEEEE--CCE
Confidence 9887766554322 233 34888888899987654 36899998 665 33333322 223445443 345
Q ss_pred EEEEeeCCCCCCEEEEEEcCCCceeEeec
Q 004067 479 FVDFHDSLDSPPRILLCSLQDGSLVLPLY 507 (776)
Q Consensus 479 l~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 507 (776)
|.++-... ..|++++..+|+..+.+.
T Consensus 532 ly~tD~~~---~~i~~~~k~~G~~~~~i~ 557 (628)
T 4a0p_A 532 LYWIDKQQ---QMIEKIDMTGREGRTKVQ 557 (628)
T ss_dssp EEEEETTT---TEEEEEETTSSSCCEEEE
T ss_pred EEEEECCC---CeEEEEECcCCCCcEEEe
Confidence 55554332 468888877776555443
No 453
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.63 E-value=7e-07 Score=92.43 Aligned_cols=110 Identities=5% Similarity=-0.202 Sum_probs=72.8
Q ss_pred CCCEEEEEeCCCCcCcc-eEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEE
Q 004067 65 DDNLITYLLSPDHSLSR-KVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIM 143 (776)
Q Consensus 65 DG~~ia~~~~~~~~~~~-~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~ 143 (776)
+..+ +|+.+....... .|.++|+++++...-+.. +..- .+.+|| ||++++
T Consensus 30 ~~~~-~yV~~~~~~~~~d~vsvID~~t~~v~~~i~v------------------------G~~P-~i~~sp---Dg~~ly 80 (368)
T 1mda_H 30 ISRR-SHITLPAYFAGTTENWVSCAGCGVTLGHSLG------------------------AFLS-LAVAGH---SGSDFA 80 (368)
T ss_dssp CTTE-EEEEECTTTCSSEEEEEEETTTTEEEEEEEE------------------------CTTC-EEEECT---TSSCEE
T ss_pred CCCe-EEEECCccCCccceEEEEECCCCeEEEEEeC------------------------CCCC-ceEECC---CCCEEE
Confidence 4444 566654332112 899999999887443321 1122 688999 999999
Q ss_pred EeC-----------CCcEEEEeCCCCccceecCCC--C----CCCccCceeCCCCCEEEEEEC---CcEEE--EecCCCc
Q 004067 144 VPL-----------PDGIYFQDLSCSKPELKLSSS--S----CSPVIDPHLSSDGTMIAFVRD---CELHV--LNLLINE 201 (776)
Q Consensus 144 ~~~-----------~~~l~~~d~~~~~~~~~l~~~--~----~~~~~~~~~SpDg~~la~~~~---~~l~~--~~l~~g~ 201 (776)
+.. ++.|.++|+.+++....+.-+ . ......+.+||||++++.... +.+.+ +|+++
T Consensus 81 Van~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-- 158 (368)
T 1mda_H 81 LASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-- 158 (368)
T ss_dssp EEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--
T ss_pred EEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--
Confidence 984 456999999999877444322 0 123568999999998766642 35777 88877
Q ss_pred eeEE
Q 004067 202 QRQL 205 (776)
Q Consensus 202 ~~~l 205 (776)
.+.+
T Consensus 159 v~~i 162 (368)
T 1mda_H 159 DQLT 162 (368)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 4444
No 454
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.61 E-value=2.7e-05 Score=79.40 Aligned_cols=235 Identities=11% Similarity=0.019 Sum_probs=135.2
Q ss_pred CEEEEEECCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecC
Q 004067 182 TMIAFVRDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQG 261 (776)
Q Consensus 182 ~~la~~~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 261 (776)
..|+|...+.|.++++++++...+...... ..++.|+++++.|++.....
T Consensus 2 ~~ll~~~~~~I~~i~~~~~~~~~~~~~~~~------------------p~g~~~d~~~~~ly~~D~~~------------ 51 (316)
T 1ijq_A 2 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRN------------------VVALDTEVASNRIYWSDLSQ------------ 51 (316)
T ss_dssp CEEEEECBSSEEEEETTSCCCEEEECSCSS------------------EEEEEEETTTTEEEEEETTT------------
T ss_pred CEEEEECCCeEEEEECCCcceEehhcCCCc------------------eEEEEEEeCCCEEEEEECCC------------
Confidence 357888888999999998877665432211 34788999988887765321
Q ss_pred CCCCCCCCcceecCCCCCCCCCeEEEEEEEcCC----CceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCc
Q 004067 262 KSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG----GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQT 337 (776)
Q Consensus 262 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 337 (776)
..|+.+++++ .....+-. ........+++.+.+..|+++.. .
T Consensus 52 -----------------------~~I~~~~~~g~~~~~~~~~~~~--------~~~~~p~glavd~~~~~ly~~d~---~ 97 (316)
T 1ijq_A 52 -----------------------RMICSTQLDRAHGVSSYDTVIS--------RDIQAPDGLAVDWIHSNIYWTDS---V 97 (316)
T ss_dssp -----------------------TEEEEEEC--------CEEEEC--------SSCSCCCEEEEETTTTEEEEEET---T
T ss_pred -----------------------CcEEEEECCCCCCCcccEEEEe--------CCCCCcCEEEEeecCCeEEEEEC---C
Confidence 3467777776 22222211 11122345788876655665532 2
Q ss_pred eEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCceeeccccCCeEEE
Q 004067 338 KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVE 416 (776)
Q Consensus 338 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~ 416 (776)
...|.++++++...+.+...... .| .++..++ ++.+|+++......|++++++|...+.+........
T Consensus 98 ~~~I~~~~~~g~~~~~~~~~~~~---------~P--~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P 166 (316)
T 1ijq_A 98 LGTVSVADTKGVKRKTLFRENGS---------KP--RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 166 (316)
T ss_dssp TTEEEEEETTSSSEEEEEECTTC---------CE--EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE
T ss_pred CCEEEEEeCCCCceEEEEECCCC---------Cc--ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCc
Confidence 34688999987766666542211 01 1112222 334444544323589999999887666543332222
Q ss_pred EEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeec-CC---CCeEEEEEcCCcCEEEEEeeCCCCCCEE
Q 004067 417 QIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NG---KGKHVAVLDHNMRNFVDFHDSLDSPPRI 492 (776)
Q Consensus 417 ~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~-~~---~~~~~~~~spdg~~l~~~~~~~~~~~~i 492 (776)
.-+.++++++.||+..... ..|+++++ +|. ..+.+. .. .....+++. +..|.++.... ..|
T Consensus 167 ~gla~d~~~~~lY~~D~~~----~~I~~~d~--dg~----~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~---~~V 231 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKL----HSISSIDV--NGG----NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIIN---EAI 231 (316)
T ss_dssp EEEEEETTTTEEEEEETTT----TEEEEEET--TSC----SCEEEEECTTTTSSEEEEEEE--TTEEEEEETTT---TEE
T ss_pred eEEEEeccCCEEEEEECCC----CeEEEEec--CCC----ceEEEeecCCccCCcEEEEEE--CCEEEEEECCC---CeE
Confidence 2345899999999987654 37888998 554 233332 11 124456663 45565554332 478
Q ss_pred EEEEcCCCceeEee
Q 004067 493 LLCSLQDGSLVLPL 506 (776)
Q Consensus 493 ~~~~~~~~~~~~~l 506 (776)
++++..+|+..+.+
T Consensus 232 ~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 232 FSANRLTGSDVNLL 245 (316)
T ss_dssp EEEETTTCCCCEEE
T ss_pred EEEeCCCCcceEEE
Confidence 88887677654444
No 455
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.60 E-value=2.5e-06 Score=88.69 Aligned_cols=123 Identities=11% Similarity=0.043 Sum_probs=76.5
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCC-eeeEEEee
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLG-VTRYEWVK 134 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~sp 134 (776)
.|..+..+|||=+|.......+.....|.++|.++++...-..... ...+ -..+.|+|
T Consensus 139 ~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~---------------------~~~~~~Yd~~~~p 197 (462)
T 2ece_A 139 RLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDR---------------------GDQYLAYDFWWNL 197 (462)
T ss_dssp EEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBC---------------------TTCCCCCCEEEET
T ss_pred cccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCC---------------------CCccccceEEECC
Confidence 4566789999944444444445556789999999988744332110 0011 22578899
Q ss_pred cCCCceEEEEeC--------------------CCcEEEEeCCCCccceecCCCCC-CCccC--ceeCCCCCEEEEEEC--
Q 004067 135 TSSKKKIIMVPL--------------------PDGIYFQDLSCSKPELKLSSSSC-SPVID--PHLSSDGTMIAFVRD-- 189 (776)
Q Consensus 135 ~~~dg~~l~~~~--------------------~~~l~~~d~~~~~~~~~l~~~~~-~~~~~--~~~SpDg~~la~~~~-- 189 (776)
|++.++.+. ...|++||+++++....+..+.. ..... +.|+|||+.+..+..
T Consensus 198 ---~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~ 274 (462)
T 2ece_A 198 ---PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVS 274 (462)
T ss_dssp ---TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEE
T ss_pred ---CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeee
Confidence 999887773 57899999998866544444321 11222 345999997555443
Q ss_pred -----CcEEEEecCCCce
Q 004067 190 -----CELHVLNLLINEQ 202 (776)
Q Consensus 190 -----~~l~~~~l~~g~~ 202 (776)
++|+++..++|+.
T Consensus 275 ~~~Lss~V~v~~~d~g~~ 292 (462)
T 2ece_A 275 LKDLSSSIWLWFYEDGKW 292 (462)
T ss_dssp TTTCCEEEEEEEEETTEE
T ss_pred ccCCCceEEEEEecCCce
Confidence 3677766665643
No 456
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.60 E-value=8.5e-07 Score=95.17 Aligned_cols=153 Identities=13% Similarity=0.084 Sum_probs=95.0
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCC-----ce-E---EeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCe
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTC-----KQ-E---LVFSPPDGGLDENNISPEEKLRRERLRERGLGV 127 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~-----~~-~---~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 127 (776)
+..++|||||++||.... .+.....|.+||+.++ +. + .+.... .+...+
T Consensus 95 v~~l~~spdg~~lav~~~-sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~---------------------~h~~~V 152 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMM-SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK---------------------DAGGMV 152 (434)
T ss_dssp EEEEEECTTSCEEEEEEE-ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC---------------------SGGGSE
T ss_pred ccEEEEcCCCCEEEEEEe-ccCCCceEEEEEccccccCCcCCcceeeeeeccC---------------------CCCCce
Confidence 578899999999985311 0111357999998764 11 0 111100 012468
Q ss_pred eeEEEeecCCC-ceEEEEe-CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-CcEEEEecCCCceeE
Q 004067 128 TRYEWVKTSSK-KKIIMVP-LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-CELHVLNLLINEQRQ 204 (776)
Q Consensus 128 ~~~~~sp~~~d-g~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~~l~~~~l~~g~~~~ 204 (776)
....|+| + ++.|+.. .++.|++||+.++... .........+..++|||||+.|+.... +.|.+|++.+...+.
T Consensus 153 ~~v~~~p---~~~~~las~s~Dg~v~iwD~~~~~~~-~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~ 228 (434)
T 2oit_A 153 IDMKWNP---TVPSMVAVCLADGSIAVLQVTETVKV-CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKV 228 (434)
T ss_dssp EEEEECS---SCTTEEEEEETTSCEEEEEESSSEEE-EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEE
T ss_pred EEEEECC---CCCCEEEEEECCCeEEEEEcCCCcce-eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCccccc
Confidence 8999999 8 6777754 7899999999988544 211111224788999999999998875 579999998333333
Q ss_pred EeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEE
Q 004067 205 LTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQ 246 (776)
Q Consensus 205 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~ 246 (776)
+...... .. ++...+..+.|++++..++...
T Consensus 229 ~~~~~~~---~~--------~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 229 IPCPPFY---ES--------DHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp ECCCTTC---CT--------TSCEEEEEEEEEETTEEEEEEE
T ss_pred ccCCccc---CC--------CCceeEEEEEEecCceEEEEEc
Confidence 3211110 00 0001245788999988776544
No 457
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.60 E-value=3.5e-05 Score=78.56 Aligned_cols=220 Identities=10% Similarity=0.016 Sum_probs=133.2
Q ss_pred eEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEe--CCCcEEEEeCCC--
Q 004067 82 KVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSC-- 157 (776)
Q Consensus 82 ~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~-- 157 (776)
.|.++++++++...+... ......+.|++ +++.|+++ ..+.|+++++++
T Consensus 11 ~I~~i~~~~~~~~~~~~~------------------------~~~p~g~~~d~---~~~~ly~~D~~~~~I~~~~~~g~~ 63 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPN------------------------LRNVVALDTEV---ASNRIYWSDLSQRMICSTQLDRAH 63 (316)
T ss_dssp SEEEEETTSCCCEEEECS------------------------CSSEEEEEEET---TTTEEEEEETTTTEEEEEEC----
T ss_pred eEEEEECCCcceEehhcC------------------------CCceEEEEEEe---CCCEEEEEECCCCcEEEEECCCCC
Confidence 499999998876655531 13567889999 88889887 457899999987
Q ss_pred --CccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceE
Q 004067 158 --SKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGY 233 (776)
Q Consensus 158 --~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (776)
.... .+..........+++.+.+..|.++.. +.|.++++++...+.+..... ....++
T Consensus 64 ~~~~~~-~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-----------------~~P~~i 125 (316)
T 1ijq_A 64 GVSSYD-TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG-----------------SKPRAI 125 (316)
T ss_dssp ----CE-EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTT-----------------CCEEEE
T ss_pred CCcccE-EEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCC-----------------CCcceE
Confidence 3333 222211112456788887777766643 468888888766655543221 113477
Q ss_pred EECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCc
Q 004067 234 WWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDE 313 (776)
Q Consensus 234 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 313 (776)
+..|+++.|++..... ...|+++++++...+.+-. ...
T Consensus 126 avdp~~g~ly~~d~~~----------------------------------~~~I~~~~~dG~~~~~~~~--------~~~ 163 (316)
T 1ijq_A 126 VVDPVHGFMYWTDWGT----------------------------------PAKIKKGGLNGVDIYSLVT--------ENI 163 (316)
T ss_dssp EEETTTTEEEEEECSS----------------------------------SCEEEEEETTSCCEEEEEC--------SSC
T ss_pred EeCCCCCEEEEEccCC----------------------------------CCeEEEEcCCCCCeEEEEE--------CCC
Confidence 8999888887654210 0357888888766555421 122
Q ss_pred ceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCce
Q 004067 314 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 393 (776)
Q Consensus 314 ~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~ 393 (776)
..-..++|+|+++.|+++.. ....|+.+|+++...+.+...... . ..+.+++.+++.+||+....+
T Consensus 164 ~~P~gla~d~~~~~lY~~D~---~~~~I~~~d~dg~~~~~~~~~~~~-~--------~~P~giav~~~~ly~~d~~~~-- 229 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGNRKTILEDEKR-L--------AHPFSLAVFEDKVFWTDIINE-- 229 (316)
T ss_dssp SCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEEECTTT-T--------SSEEEEEEETTEEEEEETTTT--
T ss_pred CCceEEEEeccCCEEEEEEC---CCCeEEEEecCCCceEEEeecCCc-c--------CCcEEEEEECCEEEEEECCCC--
Confidence 34567999998887776642 234699999987766666543111 0 011222334455555443333
Q ss_pred EEEEEeCCC
Q 004067 394 HLYLHDING 402 (776)
Q Consensus 394 ~l~~~~~~g 402 (776)
.|++++..+
T Consensus 230 ~V~~~~~~~ 238 (316)
T 1ijq_A 230 AIFSANRLT 238 (316)
T ss_dssp EEEEEETTT
T ss_pred eEEEEeCCC
Confidence 788888643
No 458
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.60 E-value=6.5e-06 Score=84.77 Aligned_cols=256 Identities=13% Similarity=0.043 Sum_probs=134.4
Q ss_pred CCeeeEEEeecCCCceEEEEeCCC-------------------------cEEEEeCCCCccceecCCCCCCCccCceeCC
Q 004067 125 LGVTRYEWVKTSSKKKIIMVPLPD-------------------------GIYFQDLSCSKPELKLSSSSCSPVIDPHLSS 179 (776)
Q Consensus 125 ~~~~~~~~sp~~~dg~~l~~~~~~-------------------------~l~~~d~~~~~~~~~l~~~~~~~~~~~~~Sp 179 (776)
..+..++++| ||+.++....+ .|+++|.++++...............++++|
T Consensus 24 ~~v~~va~d~---~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 24 GQVSGVALDS---KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp SCEEEEEECT---TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred CCceEEEECC---CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 3577889999 99877665443 6999999888766233222222356689999
Q ss_pred CCCEEEEEEC--CcEEEEecCCCc--eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeE
Q 004067 180 DGTMIAFVRD--CELHVLNLLINE--QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRF 255 (776)
Q Consensus 180 Dg~~la~~~~--~~l~~~~l~~g~--~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 255 (776)
||+ |.+... +.|+++++++.. ...+...+.. +. ....+.....++++|++..|++.....
T Consensus 101 ~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~-----g~----~~~~~~~P~~ia~~~~~g~lyv~d~~~------ 164 (329)
T 3fvz_A 101 DGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQP-----GS----DQNHFCQPTDVAVEPSTGAVFVSDGYC------ 164 (329)
T ss_dssp TSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBC-----CC----STTCCSSEEEEEECTTTCCEEEEECSS------
T ss_pred CCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCC-----CC----CccccCCCcEEEEeCCCCeEEEEeCCC------
Confidence 999 333332 469999987663 3333211100 00 011122245789999544465543100
Q ss_pred EEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCC-CCCCCCcceEEEEEeccCCeEEEEEEee
Q 004067 256 RIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQVLNR 334 (776)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 334 (776)
...|++|+.++.....+...... ............++++||+..|+++. .
T Consensus 165 ----------------------------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d-~ 215 (329)
T 3fvz_A 165 ----------------------------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD-R 215 (329)
T ss_dssp ----------------------------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE-T
T ss_pred ----------------------------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE-C
Confidence 03467787655544444221000 00011223467899999944454443 2
Q ss_pred cCceEEEEEEECCCCceEEEEEecc-CceeecccccccCCCCccccCCeEEEEecc------CCceEEEEEeCCCceeec
Q 004067 335 SQTKLKVLKFDIKTGQRKVILVEEL-DSWVNLHDCFTPLDKGVTKYSGGFIWASEK------TGFRHLYLHDINGTCLGP 407 (776)
Q Consensus 335 ~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~------~g~~~l~~~~~~g~~~~~ 407 (776)
....|.+||+++|+......... .... + .+.+.+ ++++.++. .+...+++|+..+++...
T Consensus 216 --~~~~I~~~~~~~G~~~~~~~~~~~~~~~-----~-----~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 216 --ENGRIQCFKTDTKEFVREIKHASFGRNV-----F-----AISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp --TTTEEEEEETTTCCEEEEECCTTTTTCE-----E-----EEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEE
T ss_pred --CCCEEEEEECCCCcEEEEEeccccCCCc-----c-----eeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE
Confidence 23469999999776544332111 0000 0 011122 23333322 123488999976665433
Q ss_pred -cc---cCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 408 -IT---EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 408 -lt---~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
+. ........+ .+++|| .||+....++ .|+.+++
T Consensus 283 ~~~~~~~~~~~p~~i-a~~~dG-~lyvad~~~~----~I~~~~~ 320 (329)
T 3fvz_A 283 VFKPVRKHFDMPHDI-VASEDG-TVYIGDAHTN----TVWKFTL 320 (329)
T ss_dssp EECCSSSCCSSEEEE-EECTTS-EEEEEESSSC----CEEEEEE
T ss_pred EEcCCCCccCCeeEE-EECCCC-CEEEEECCCC----EEEEEeC
Confidence 32 122223444 489999 6788776554 3444444
No 459
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.59 E-value=6.6e-05 Score=75.63 Aligned_cols=272 Identities=13% Similarity=0.078 Sum_probs=150.7
Q ss_pred CeeeEEEeecCCCceEEEEeC-CCcEEEEeCCCCccceecC-CCCCCCccCceeCCCCCEEEEEE-CCcEEEEecCCCce
Q 004067 126 GVTRYEWVKTSSKKKIIMVPL-PDGIYFQDLSCSKPELKLS-SSSCSPVIDPHLSSDGTMIAFVR-DCELHVLNLLINEQ 202 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~~-~~~l~~~d~~~~~~~~~l~-~~~~~~~~~~~~SpDg~~la~~~-~~~l~~~~l~~g~~ 202 (776)
.+..+.+++ ||+..+... ++.|+++|.. ++.. .+. .........+.++|||+..+... .+.|++++.+ ++.
T Consensus 16 ~~~~i~~d~---~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 16 GPYGITVSD---KGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII 89 (299)
T ss_dssp CEEEEEECT---TSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CccceEECC---CCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE
Confidence 466788888 998555544 5679999998 5554 332 11222366788999997443333 3469999987 555
Q ss_pred eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCC
Q 004067 203 RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASN 282 (776)
Q Consensus 203 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 282 (776)
+.+...... .....++++|||+ |++.....
T Consensus 90 ~~~~~~~~~----------------~~~~~i~~~~~g~-l~v~~~~~--------------------------------- 119 (299)
T 2z2n_A 90 KEYTLPNPD----------------SAPYGITEGPNGD-IWFTEMNG--------------------------------- 119 (299)
T ss_dssp EEEECSSTT----------------CCEEEEEECTTSC-EEEEETTT---------------------------------
T ss_pred EEEeCCCcC----------------CCceeeEECCCCC-EEEEecCC---------------------------------
Confidence 444321110 0134677889886 54433111
Q ss_pred CeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCce
Q 004067 283 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 362 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 362 (776)
..|+++|. +++...+.. .........+.+++||+.+ +... ....|+++|+ +++...+........
T Consensus 120 --~~i~~~d~-~g~~~~~~~-------~~~~~~~~~i~~~~~g~l~-v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~~ 184 (299)
T 2z2n_A 120 --NRIGRITD-DGKIREYEL-------PNKGSYPSFITLGSDNALW-FTEN---QNNAIGRITE-SGDITEFKIPTPASG 184 (299)
T ss_dssp --TEEEEECT-TCCEEEEEC-------SSTTCCEEEEEECTTSCEE-EEET---TTTEEEEECT-TCCEEEEECSSTTCC
T ss_pred --ceEEEECC-CCCEEEecC-------CCCCCCCceEEEcCCCCEE-EEeC---CCCEEEEEcC-CCcEEEeeCCCCCCc
Confidence 24678888 555555433 1223456788999999743 3321 2346999999 777655421111100
Q ss_pred eecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCceeecccc--CCeEEEEEEeecCCCcEEEEEEccCCCce
Q 004067 363 VNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLE 439 (776)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~--~~~~~~~~~~~s~dg~~i~~~~~~~~~~~ 439 (776)
| ..+..++ +.+++.....+ .|+++++ +++...+.. ....+..+ .++++|+ +|+.....
T Consensus 185 --------~--~~i~~~~~g~l~v~~~~~~--~i~~~~~-~g~~~~~~~~~~~~~~~~i-~~~~~g~-l~v~~~~~---- 245 (299)
T 2z2n_A 185 --------P--VGITKGNDDALWFVEIIGN--KIGRITT-SGEITEFKIPTPNARPHAI-TAGAGID-LWFTEWGA---- 245 (299)
T ss_dssp --------E--EEEEECTTSSEEEEETTTT--EEEEECT-TCCEEEEECSSTTCCEEEE-EECSTTC-EEEEETTT----
T ss_pred --------c--eeEEECCCCCEEEEccCCc--eEEEECC-CCcEEEEECCCCCCCceeE-EECCCCC-EEEeccCC----
Confidence 0 1122333 34544443344 8999999 444443322 22334444 3788887 66665433
Q ss_pred eeEEEEEeCCCCCCccccceeec--C-CCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCC
Q 004067 440 SHLYCAKLYPDWNHTLEAPVKLT--N-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 500 (776)
Q Consensus 440 ~~l~~~~~~~~g~~~~~~~~~l~--~-~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~ 500 (776)
..|+.++. .| ....+. . ......+.+ ++|+.++-.. + ..+.+++..++
T Consensus 246 ~~i~~~d~--~g-----~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~----~~l~~~~~~~~ 296 (299)
T 2z2n_A 246 NKIGRLTS--NN-----IIEEYPIQIKSAEPHGICF-DGETIWFAME-C----DKIGKLTLIKD 296 (299)
T ss_dssp TEEEEEET--TT-----EEEEEECSSSSCCEEEEEE-CSSCEEEEET-T----TEEEEEEEC--
T ss_pred ceEEEECC--CC-----ceEEEeCCCCCCccceEEe-cCCCEEEEec-C----CcEEEEEcCcc
Confidence 35777776 33 233332 1 123566777 8886544332 1 46888876544
No 460
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.59 E-value=2.9e-06 Score=84.51 Aligned_cols=232 Identities=10% Similarity=0.035 Sum_probs=127.7
Q ss_pred CeeeEEEeecCCCceEEEE-e--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE-CCcEEEEecCCCc
Q 004067 126 GVTRYEWVKTSSKKKIIMV-P--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR-DCELHVLNLLINE 201 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~-~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~-~~~l~~~~l~~g~ 201 (776)
....+.+++ ||+ |++ . .++.|+++|..++... .+..........+.++|||+ |.+.. ++.|++++.+++.
T Consensus 25 ~p~~i~~~~---~g~-l~v~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDS---AGN-VYVTSEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECT---TCC-EEEEECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSC
T ss_pred CccceEECC---CCC-EEEEccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCce
Confidence 455778899 998 555 4 5678999998776655 43322222467789999998 33333 4579999988776
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
.+.+...+. ....+++++|||+ |++.....
T Consensus 99 ~~~~~~~~~-----------------~~p~~i~~~~~g~-l~v~~~~~-------------------------------- 128 (270)
T 1rwi_B 99 QTVLPFDGL-----------------NYPEGLAVDTQGA-VYVADRGN-------------------------------- 128 (270)
T ss_dssp CEECCCCSC-----------------SSEEEEEECTTCC-EEEEEGGG--------------------------------
T ss_pred EeeeecCCc-----------------CCCcceEECCCCC-EEEEECCC--------------------------------
Confidence 554422111 0134778999997 54433211
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCc
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS 361 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~ 361 (776)
..|++++..+....... .........++++|||+ +++.. . ....|+++|++++..........
T Consensus 129 ---~~i~~~~~~~~~~~~~~--------~~~~~~p~~i~~~~~g~-l~v~~-~--~~~~i~~~~~~~~~~~~~~~~~~-- 191 (270)
T 1rwi_B 129 ---NRVVKLAAGSKTQTVLP--------FTGLNDPDGVAVDNSGN-VYVTD-T--DNNRVVKLEAESNNQVVLPFTDI-- 191 (270)
T ss_dssp ---TEEEEECTTCCSCEECC--------CCSCCSCCCEEECTTCC-EEEEE-G--GGTEEEEECTTTCCEEECCCSSC--
T ss_pred ---CEEEEEECCCceeEeec--------cccCCCceeEEEeCCCC-EEEEE-C--CCCEEEEEecCCCceEeecccCC--
Confidence 23566654444332221 11122345688999997 44433 2 23469999998766443211100
Q ss_pred eeecccccccCCCCccccCCeEEEEec-cCCceEEEEEeCCCceeeccccCC-eEEEEEEeecCCCcEEEEEEccCCCce
Q 004067 362 WVNLHDCFTPLDKGVTKYSGGFIWASE-KTGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLE 439 (776)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~g~~~l~~~~~~g~~~~~lt~~~-~~~~~~~~~s~dg~~i~~~~~~~~~~~ 439 (776)
..+.++..++++.+|+++ .++ .|++++.++.....+.... .....+ .++++|+ ||+....++
T Consensus 192 ---------~~p~~i~~d~~g~l~v~~~~~~--~v~~~~~~~~~~~~~~~~~~~~p~~i-~~~~~g~-l~v~~~~~~--- 255 (270)
T 1rwi_B 192 ---------TAPWGIAVDEAGTVYVTEHNTN--QVVKLLAGSTTSTVLPFTGLNTPLAV-AVDSDRT-VYVADRGND--- 255 (270)
T ss_dssp ---------CSEEEEEECTTCCEEEEETTTS--CEEEECTTCSCCEECCCCSCSCEEEE-EECTTCC-EEEEEGGGT---
T ss_pred ---------CCceEEEECCCCCEEEEECCCC--cEEEEcCCCCcceeeccCCCCCceeE-EECCCCC-EEEEECCCC---
Confidence 011122334444444443 344 7999999887654443322 234444 4889987 777766543
Q ss_pred eeEEEEEe
Q 004067 440 SHLYCAKL 447 (776)
Q Consensus 440 ~~l~~~~~ 447 (776)
.|..+++
T Consensus 256 -~v~~~~~ 262 (270)
T 1rwi_B 256 -RVVKLTS 262 (270)
T ss_dssp -EEEEECC
T ss_pred -EEEEEcC
Confidence 4555554
No 461
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.59 E-value=1.8e-05 Score=83.99 Aligned_cols=250 Identities=7% Similarity=-0.061 Sum_probs=139.1
Q ss_pred CeeeEEEeecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC-C--cEEEEecCCC
Q 004067 126 GVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD-C--ELHVLNLLIN 200 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~-~--~l~~~~l~~g 200 (776)
....+.|++ ||+ |++. .+..|+++|++++... .+..... ... +.|+|+|+.|+.... . .|++++..++
T Consensus 132 ~P~~la~d~---~g~-lyv~d~~~~~I~~id~~~g~~~-~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 132 YMWGIAAVG---NNT-VLAYQRDDPRVRLISVDDNKVT-TVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CEEEEEECS---TTE-EEEEETTTTEEEEEETTTTEEE-EEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CceEEEEeC---CCC-EEEEecCCCcEEEEECCCCEEE-EeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 456788999 998 5554 3467999999998877 4433222 234 999999997766654 2 6999999877
Q ss_pred cee-EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCC
Q 004067 201 EQR-QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAG 279 (776)
Q Consensus 201 ~~~-~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (776)
... .+...... .......++++|++..|++ ... .
T Consensus 205 ~~~~~~g~~~~~--------------~~~~p~~iav~p~~g~lyv-~d~-~----------------------------- 239 (409)
T 3hrp_A 205 WAPTRIGQLGST--------------FSGKIGAVALDETEEWLYF-VDS-N----------------------------- 239 (409)
T ss_dssp TCEEEEEECCTT--------------SCSCCCBCEECTTSSEEEE-ECT-T-----------------------------
T ss_pred ceeEEeeeccch--------------hcCCcEEEEEeCCCCeEEE-EEC-C-----------------------------
Confidence 642 33111000 0111346789997777776 321 1
Q ss_pred CCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceE-E-EEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEe
Q 004067 280 ASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYL-A-RVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 357 (776)
Q Consensus 280 ~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~-~-~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 357 (776)
..|+++|.+++....+..... ....... . .++|+|++..|+++. . ....|++++.++. ...+...
T Consensus 240 -----~~I~~~d~~~~~~~~~~~~~~----~g~~~~~P~~~ia~~p~~g~lyv~d-~--~~~~I~~~~~~g~-~~~~~g~ 306 (409)
T 3hrp_A 240 -----KNFGRFNVKTQEVTLIKQLEL----SGSLGTNPGPYLIYYFVDSNFYMSD-Q--NLSSVYKITPDGE-CEWFCGS 306 (409)
T ss_dssp -----CEEEEEETTTCCEEEEEECCC----CSCCCCSSCCEEEEETTTTEEEEEE-T--TTTEEEEECTTCC-EEEEEEC
T ss_pred -----CcEEEEECCCCCEEEEecccc----cCCCCCCccccEEEeCCCCEEEEEe-C--CCCEEEEEecCCC-EEEEEeC
Confidence 357899998887655421100 1111111 2 789999655555543 2 2346999998754 4444443
Q ss_pred c-cCceeecc---cccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccC--------------Ce-EEEEE
Q 004067 358 E-LDSWVNLH---DCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG--------------DW-MVEQI 418 (776)
Q Consensus 358 ~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~--------------~~-~~~~~ 418 (776)
. ...+.+.. ..|. .+.+++.++++-+|+++..+...|+++++.++....+... .+ ....+
T Consensus 307 ~~~~g~~dg~~~~~~~~-~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~gi 385 (409)
T 3hrp_A 307 ATQKTVQDGLREEALFA-QPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDI 385 (409)
T ss_dssp TTCCSCBCEEGGGCBCS-SEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEE
T ss_pred CCCCCcCCCcccccEeC-CCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEE
Confidence 2 11221110 0111 1223444544445555542445899999666665544332 01 12333
Q ss_pred EeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 419 VGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 419 ~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
.++++| .||+..... ..|+++.+
T Consensus 386 -avd~~g-~lyVad~~n----~~Ir~i~~ 408 (409)
T 3hrp_A 386 -CYDGEG-GYWIAEAWG----KAIRKYAV 408 (409)
T ss_dssp -EECSSS-EEEEEESTT----CEEEEEEE
T ss_pred -EEcCCC-CEEEEECCC----CeEEEEEe
Confidence 478885 466665543 24665554
No 462
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.58 E-value=2.5e-05 Score=80.83 Aligned_cols=236 Identities=11% Similarity=0.058 Sum_probs=139.0
Q ss_pred CCEEEEEECCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeec
Q 004067 181 GTMIAFVRDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQ 260 (776)
Q Consensus 181 g~~la~~~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 260 (776)
...|+|.....|+.+++++.....+...... ..+++|.++++.|++.....
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~------------------~~~l~~d~~~~~ly~~D~~~----------- 94 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTLLLNNLEN------------------AIALDFHHRRELVFWSDVTL----------- 94 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEEEECSCSC------------------EEEEEEETTTTEEEEEETTT-----------
T ss_pred CceeEeecccceEEEeCCCCeeEEeecCCCc------------------eEEEEEeccccEEEEEeccC-----------
Confidence 3467777778899999988777666543221 34788999888887764221
Q ss_pred CCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEE
Q 004067 261 GKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLK 340 (776)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 340 (776)
..|+.++++++....+.. ........+++.+.+..|+++.. ....
T Consensus 95 ------------------------~~I~r~~~~g~~~~~~~~--------~~~~~p~glavd~~~g~ly~~d~---~~~~ 139 (349)
T 3v64_C 95 ------------------------DRILRANLNGSNVEEVVS--------TGLESPGGLAVDWVHDKLYWTDS---GTSR 139 (349)
T ss_dssp ------------------------TEEEEEETTSCSCEEEEC--------SSCSCCCEEEEETTTTEEEEEET---TTTE
T ss_pred ------------------------CceEEEecCCCCceEEEe--------CCCCCccEEEEecCCCeEEEEcC---CCCe
Confidence 347888888877555422 11122345788876666666542 2336
Q ss_pred EEEEECCCCceEEEEEeccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEE
Q 004067 341 VLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIV 419 (776)
Q Consensus 341 l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~ 419 (776)
|+++++++...+.+...... .| .+++.++ ++.+|.++......|++++++|...+.+.........-+
T Consensus 140 I~~~~~dG~~~~~l~~~~l~---------~P--~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGl 208 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQSLE---------KP--RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGL 208 (349)
T ss_dssp EEEEETTSCSCEEEECTTCS---------CE--EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEE
T ss_pred EEEEcCCCCceEEEEeCCCC---------Cc--ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceE
Confidence 99999987766555432110 01 1112232 334455544334699999999987666644332222234
Q ss_pred eecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeec-CC-CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 420 GVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 420 ~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~-~~-~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
.++++++.||+..... ..|+++++ +|. ..+.+. .. .....+++ ++..|.++-... ..|.+++.
T Consensus 209 a~d~~~~~lY~aD~~~----~~I~~~~~--dG~----~~~~~~~~~~~~P~giav--~~~~ly~td~~~---~~V~~~~~ 273 (349)
T 3v64_C 209 TIDYAGRRMYWVDAKH----HVIERANL--DGS----HRKAVISQGLPHPFAITV--FEDSLYWTDWHT---KSINSANK 273 (349)
T ss_dssp EEETTTTEEEEEETTT----TEEEEEET--TSC----SCEEEECSSCSSEEEEEE--ETTEEEEEETTT---TEEEEEET
T ss_pred EEeCCCCEEEEEECCC----CEEEEEeC--CCC----ceEEEEeCCCCCceEEEE--ECCEEEEecCCC---CeEEEEEc
Confidence 5999899999987654 37899998 554 223322 22 23445666 333455543322 36777775
Q ss_pred CCCceeEee
Q 004067 498 QDGSLVLPL 506 (776)
Q Consensus 498 ~~~~~~~~l 506 (776)
.+|+..+.+
T Consensus 274 ~~G~~~~~i 282 (349)
T 3v64_C 274 FTGKNQEII 282 (349)
T ss_dssp TTCCSCEEE
T ss_pred cCCCccEEe
Confidence 566544443
No 463
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.56 E-value=3.1e-05 Score=81.75 Aligned_cols=228 Identities=10% Similarity=0.042 Sum_probs=139.4
Q ss_pred ceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEe--CCCcEEEEeCCCC
Q 004067 81 RKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCS 158 (776)
Q Consensus 81 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~ 158 (776)
..|+++++++.+...+... ......+.|++ .+..|+++ ..+.|+++++++.
T Consensus 92 ~~I~~i~l~~~~~~~~~~~------------------------~~~~~~l~~d~---~~~~lywsD~~~~~I~~~~~~g~ 144 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN------------------------LRNVVALDTEV---ASNRIYWSDLSQRMICSTQLDRA 144 (400)
T ss_dssp TEEEEECTTSCSCEEEECS------------------------CSCEEEEEEET---TTTEEEEEETTTTEEEEEEC---
T ss_pred ceeEEEccCCcceeEeccc------------------------cCcceEEeeee---ccCceEEEecCCCeEEEEEcccC
Confidence 3699999998877666531 13567889999 88889987 5577999999873
Q ss_pred ----ccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcce
Q 004067 159 ----KPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTG 232 (776)
Q Consensus 159 ----~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (776)
... .+..........+++.+.+..|.++.. +.|++++++++..+.+...... ...+
T Consensus 145 ~~~~~~~-~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~-----------------~P~~ 206 (400)
T 3p5b_L 145 HGVSSYD-TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----------------KPRA 206 (400)
T ss_dssp ---CCCE-EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC-----------------CEEE
T ss_pred CCCCcce-EEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC-----------------Ccce
Confidence 233 222211122455677777777766653 4688888887766655543211 1347
Q ss_pred EEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCC
Q 004067 233 YWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYD 312 (776)
Q Consensus 233 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 312 (776)
++..|.+..|++...... ..|++.++++...+.+-. ..
T Consensus 207 iavdp~~g~ly~td~~~~----------------------------------~~I~~~~~dG~~~~~~~~--------~~ 244 (400)
T 3p5b_L 207 IVVDPVHGFMYWTDWGTP----------------------------------AKIKKGGLNGVDIYSLVT--------EN 244 (400)
T ss_dssp EEEETTTTEEEEEECSSS----------------------------------CCEEEEETTSCSCEEEEC--------SS
T ss_pred EEEecccCeEEEEeCCCC----------------------------------CEEEEEeCCCCccEEEEE--------CC
Confidence 789998887876542110 237888888776655522 12
Q ss_pred cceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCc
Q 004067 313 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 392 (776)
Q Consensus 313 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~ 392 (776)
...-..++++|+++.|+++.. ....|+.+|++++..+.+...... + +.+.+++.+.+.+||+....+
T Consensus 245 l~~P~glavd~~~~~lY~aD~---~~~~I~~~d~dG~~~~~~~~~~~~-l--------~~P~gl~v~~~~lywtd~~~~- 311 (400)
T 3p5b_L 245 IQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGNRKTILEDEKR-L--------AHPFSLAVFEDKVFWTDIINE- 311 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCCCEEEEECSST-T--------SSEEEEEEETTEEEEEESSSC-
T ss_pred CCceEEEEEEeCCCEEEEEEC---CCCEEEEEeCCCCccEEEEeCCCC-C--------CCCEEEEEeCCEEEEecCCCC-
Confidence 234567999998887777642 234699999988777776543211 1 111122334555666553333
Q ss_pred eEEEEEe-CCCceeeccc
Q 004067 393 RHLYLHD-INGTCLGPIT 409 (776)
Q Consensus 393 ~~l~~~~-~~g~~~~~lt 409 (776)
.|++++ .+|...+.|.
T Consensus 312 -~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 312 -AIFSANRLTGSDVNLLA 328 (400)
T ss_dssp -SEEEEESSSCCCCEEEE
T ss_pred -eEEEEEcCCCCceEEEe
Confidence 788888 4454444444
No 464
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.56 E-value=3.2e-05 Score=78.06 Aligned_cols=272 Identities=13% Similarity=0.032 Sum_probs=149.0
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.+..+.+++||+ |.+..... ..|++++++ ++...+..... ...+....+++
T Consensus 21 ~p~~i~~d~~g~-l~v~~~~~----~~v~~~~~~-~~~~~~~~~~~----------------------~~~~~~i~~~~- 71 (300)
T 2qc5_A 21 GPYGITSSEDGK-VWFTQHKA----NKISSLDQS-GRIKEFEVPTP----------------------DAKVMCLIVSS- 71 (300)
T ss_dssp CEEEEEECTTSC-EEEEETTT----TEEEEECTT-SCEEEEECSST----------------------TCCEEEEEECT-
T ss_pred CcceeeECCCCC-EEEEcCCC----CeEEEECCC-CceEEEECCCC----------------------CCcceeEEECC-
Confidence 457888999998 43333222 469999998 66554431100 13466778888
Q ss_pred CCCceEEEEeC-CCcEEEEeCCCCccceecCC-CCCCCccCceeCCCCCEEEEEE-CCcEEEEecCCCceeEEeeCCCCC
Q 004067 136 SSKKKIIMVPL-PDGIYFQDLSCSKPELKLSS-SSCSPVIDPHLSSDGTMIAFVR-DCELHVLNLLINEQRQLTHGANGN 212 (776)
Q Consensus 136 ~~dg~~l~~~~-~~~l~~~d~~~~~~~~~l~~-~~~~~~~~~~~SpDg~~la~~~-~~~l~~~~l~~g~~~~lt~~~~~~ 212 (776)
+|+..+... ++.|+++|.+ ++.+ .+.. ........+.++|+|+..+-.. .+.|++++.+ |+.+.+......
T Consensus 72 --~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~- 145 (300)
T 2qc5_A 72 --LGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKG- 145 (300)
T ss_dssp --TSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTT-
T ss_pred --CCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCC-
Confidence 998554443 4679999988 4444 3321 1122356778889987433322 3469999988 666554322110
Q ss_pred ceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEc
Q 004067 213 TVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 292 (776)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~ 292 (776)
.....+.+.|||+ |++..... ..|+++|.
T Consensus 146 ---------------~~~~~i~~d~~g~-l~v~~~~~-----------------------------------~~i~~~~~ 174 (300)
T 2qc5_A 146 ---------------SYPAFITLGSDNA-LWFTENQN-----------------------------------NSIGRITN 174 (300)
T ss_dssp ---------------CCEEEEEECTTSS-EEEEETTT-----------------------------------TEEEEECT
T ss_pred ---------------CCceeEEECCCCC-EEEEecCC-----------------------------------CeEEEECC
Confidence 0134677899998 55443211 24677887
Q ss_pred CCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccC
Q 004067 293 AGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPL 372 (776)
Q Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~ 372 (776)
+++...+.. .........+.+++||++ ++... ....|+++|+ ++....+....... .
T Consensus 175 -~g~~~~~~~-------~~~~~~~~~i~~d~~g~l-~v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~----------~ 231 (300)
T 2qc5_A 175 -TGKLEEYPL-------PTNAAAPVGITSGNDGAL-WFVEI---MGNKIGRITT-TGEISEYDIPTPNA----------R 231 (300)
T ss_dssp -TCCEEEEEC-------SSTTCCEEEEEECTTSSE-EEEET---TTTEEEEECT-TCCEEEEECSSTTC----------C
T ss_pred -CCcEEEeeC-------CCCCCCcceEEECCCCCE-EEEcc---CCCEEEEEcC-CCcEEEEECCCCCC----------C
Confidence 555555433 222345678899999973 33321 2235899998 55554432111000 0
Q ss_pred CCCccccCCeEEEEec-cCCceEEEEEeCCCceeecc--ccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 373 DKGVTKYSGGFIWASE-KTGFRHLYLHDINGTCLGPI--TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 373 ~~~~~~~~~~~~~~s~-~~g~~~l~~~~~~g~~~~~l--t~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
+..+..++++-+|+++ ..+ .|+++++++ ....+ ......+..+. ++++|+ ||+... . .|++++.
T Consensus 232 ~~~i~~d~~g~l~v~~~~~~--~i~~~~~~g-~~~~~~~~~~~~~~~~i~-~~~~g~-l~v~~~-~-----~i~~~~p 298 (300)
T 2qc5_A 232 PHAITAGKNSEIWFTEWGAN--QIGRITNDN-TIQEYQLQTENAEPHGIT-FGKDGS-VWFALK-C-----KIGKLNL 298 (300)
T ss_dssp EEEEEECSTTCEEEEETTTT--EEEEECTTS-CEEEEECCSTTCCCCCEE-ECTTSC-EEEECS-S-----EEEEEEE
T ss_pred ceEEEECCCCCEEEeccCCC--eEEEECCCC-cEEEEECCccCCccceeE-eCCCCC-EEEEcc-C-----ceEEeCC
Confidence 0112233333344443 334 799999854 33333 21122233333 677877 566543 1 3555554
No 465
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.55 E-value=1.5e-07 Score=104.01 Aligned_cols=124 Identities=19% Similarity=0.275 Sum_probs=82.6
Q ss_pred EEEEEEcCCCCCC--CCCCceEEEEEcCCCCcccccccccccchhhhHHHHh-CCcEEEEECCCCC----CCCchhhhhh
Q 004067 537 LYGALYKPDESRY--GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGT----ARRGLKFEAS 609 (776)
Q Consensus 537 l~~~~~~P~~~~~--~~~~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rg~----g~~~~~~~~~ 609 (776)
+...+|.|..... ..+++|+||++|||+........+ . ...|++ .+++|+++|||-. ...+.
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~----~--~~~la~~~~~vvv~~~YRl~~~Gfl~~~~----- 180 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLY----D--GSVLASYGNVIVITVNYRLGVLGFLSTGD----- 180 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGS----C--CHHHHHHHTCEEEEECCCCHHHHHCCCSS-----
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCcc----C--chhhhccCCEEEEEeCCcCcccccCcCCC-----
Confidence 6677888865311 125789999999986543322222 1 234554 4799999999932 11110
Q ss_pred hhhccCCccHHHHHHHHHHHHHc---CCCCCCcEEEEeechHHHHHHHHHhhCC---CceEEEEEcCCC
Q 004067 610 IKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPV 672 (776)
Q Consensus 610 ~~~~~~~~~~~D~~~~i~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~~---~~~~~~v~~~~~ 672 (776)
....+...+.|+..+++|+.++ ...|+++|.|+|+|.||.+++.++.... .+|+++|+.++.
T Consensus 181 -~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 181 -QAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp -SSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 0111233488999999999885 3469999999999999999998887543 568898887753
No 466
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=1.3e-05 Score=84.26 Aligned_cols=236 Identities=11% Similarity=0.063 Sum_probs=140.3
Q ss_pred CCEEEEEECCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeec
Q 004067 181 GTMIAFVRDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQ 260 (776)
Q Consensus 181 g~~la~~~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 260 (776)
...|+|...+.|+.++++++....+...... ..+++|.++++.|++.....
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~------------------~~gl~~d~~~~~ly~~D~~~----------- 137 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLNNLEN------------------AIALDFHHRRELVFWSDVTL----------- 137 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEECSCSC------------------EEEEEEETTTTEEEEEETTT-----------
T ss_pred cceeEeecCccceeeccCCCcEEEEecCCCc------------------cEEEEEecCCCeEEEEeCCC-----------
Confidence 3467777778899999998877766543321 34788999888887764221
Q ss_pred CCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEE
Q 004067 261 GKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLK 340 (776)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 340 (776)
..|+.++++++....+... .......+++.+.+..|+++.. . ...
T Consensus 138 ------------------------~~I~r~~~~g~~~~~~~~~--------~~~~p~glavd~~~g~lY~~d~-~--~~~ 182 (386)
T 3v65_B 138 ------------------------DRILRANLNGSNVEEVVST--------GLESPGGLAVDWVHDKLYWTDS-G--TSR 182 (386)
T ss_dssp ------------------------TEEEEEETTSCCEEEEECS--------SCSCCCCEEEETTTTEEEEEET-T--TTE
T ss_pred ------------------------CcEEEEecCCCCcEEEEeC--------CCCCccEEEEEeCCCeEEEEcC-C--CCe
Confidence 3578889888776554221 1112234778876666666542 2 236
Q ss_pred EEEEECCCCceEEEEEeccCceeecccccccCCCCcccc-CCeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEEEE
Q 004067 341 VLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKY-SGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIV 419 (776)
Q Consensus 341 l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~~~ 419 (776)
|+++++++...+.+...... .| .+++.+ .++.+|.++......|++++++|...+.+.........-+
T Consensus 183 I~~~~~dg~~~~~l~~~~l~---------~P--~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGl 251 (386)
T 3v65_B 183 IEVANLDGAHRKVLLWQSLE---------KP--RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGL 251 (386)
T ss_dssp EEECBTTSCSCEEEECSSCS---------CE--EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred EEEEeCCCCceEEeecCCCC---------CC--cEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeE
Confidence 88999987766555432110 01 111222 2334455554334699999999887666644332222234
Q ss_pred eecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecC-C-CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 420 GVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-G-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 420 ~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~-~-~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
.++++++.||+..... ..|+++++ +|. ..+.+.. . .....+++ ++..|.++-.. ...|.+++.
T Consensus 252 avd~~~~~lY~aD~~~----~~I~~~d~--dG~----~~~~~~~~~~~~P~giav--~~~~ly~td~~---~~~V~~~~~ 316 (386)
T 3v65_B 252 TIDYAGRRMYWVDAKH----HVIERANL--DGS----HRKAVISQGLPHPFAITV--FEDSLYWTDWH---TKSINSANK 316 (386)
T ss_dssp EEEGGGTEEEEEETTT----TEEEEECT--TSC----SCEEEECSSCSSEEEEEE--ETTEEEEEETT---TTEEEEEET
T ss_pred EEeCCCCEEEEEECCC----CEEEEEeC--CCC----eeEEEEECCCCCceEEEE--ECCEEEEeeCC---CCeEEEEEC
Confidence 5898899999997654 37899988 554 2233322 2 23455666 33455555432 246888875
Q ss_pred CCCceeEee
Q 004067 498 QDGSLVLPL 506 (776)
Q Consensus 498 ~~~~~~~~l 506 (776)
.+|+..+.+
T Consensus 317 ~~G~~~~~i 325 (386)
T 3v65_B 317 FTGKNQEII 325 (386)
T ss_dssp TTCCSCEEE
T ss_pred CCCcceEEE
Confidence 566654444
No 467
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=98.54 E-value=3.8e-08 Score=99.18 Aligned_cols=96 Identities=15% Similarity=-0.002 Sum_probs=62.7
Q ss_pred CceEEEEEcCCCCcccccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHHHHHc
Q 004067 553 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 632 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 632 (776)
..|.|+++||.+++.. .|..++..|. +.|+++|+++... ...++++.+.+..++..
T Consensus 23 ~~~~l~~~hg~~~~~~-------~~~~~~~~L~---~~v~~~d~~~~~~--------------~~~~~~~a~~~~~~i~~ 78 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTT-------VFHSLASRLS---IPTYGLQCTRAAP--------------LDSIHSLAAYYIDCIRQ 78 (283)
T ss_dssp SSCCEEEECCTTCCSG-------GGHHHHHHCS---SCEEEECCCTTSC--------------CSCHHHHHHHHHHHHTT
T ss_pred CCCeEEEECCCCCCHH-------HHHHHHHhcC---ceEEEEecCCCCC--------------CCCHHHHHHHHHHHHHH
Confidence 3467899999876643 3444455554 9999999964211 11244444443333332
Q ss_pred CCCCCCcEEEEeechHHHHHHHHHhhC---CCceE---EEEEcCCCC
Q 004067 633 GLAKVGHIGLYGWSYGGYLSAITLARF---PDVFQ---CAVSGAPVT 673 (776)
Q Consensus 633 ~~id~~~i~l~G~S~GG~~a~~~a~~~---~~~~~---~~v~~~~~~ 673 (776)
.. ...++.++||||||.+|+.+|.+. ++.+. .++++++..
T Consensus 79 ~~-~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 79 VQ-PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp TC-CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred hC-CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 21 236899999999999999999864 77777 888777654
No 468
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.53 E-value=3.6e-05 Score=81.28 Aligned_cols=235 Identities=11% Similarity=0.023 Sum_probs=138.5
Q ss_pred CEEEEEECCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecC
Q 004067 182 TMIAFVRDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQG 261 (776)
Q Consensus 182 ~~la~~~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 261 (776)
..|+|.....|+.++++++....+...... ..+++|+++++.|++.....
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~------------------~~~l~~d~~~~~lywsD~~~------------ 133 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRN------------------VVALDTEVASNRIYWSDLSQ------------ 133 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEECSCSC------------------EEEEEEETTTTEEEEEETTT------------
T ss_pred ceeEEeccceeEEEccCCcceeEeccccCc------------------ceEEeeeeccCceEEEecCC------------
Confidence 478888888999999998877776543221 34788999888887764321
Q ss_pred CCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCC----ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCc
Q 004067 262 KSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG----PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQT 337 (776)
Q Consensus 262 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 337 (776)
..|+.+++++. ....+- .........+++.+.++.|+++.. .
T Consensus 134 -----------------------~~I~~~~~~g~~~~~~~~~~~--------~~~~~~p~glavD~~~~~lY~~d~-~-- 179 (400)
T 3p5b_L 134 -----------------------RMICSTQLDRAHGVSSYDTVI--------SRDIQAPDGLAVDWIHSNIYWTDS-V-- 179 (400)
T ss_dssp -----------------------TEEEEEEC------CCCEEEE--------CSSCSCEEEEEEETTTTEEEEEET-T--
T ss_pred -----------------------CeEEEEEcccCCCCCcceEEE--------eCCCCCcccEEEEecCCceEEEEC-C--
Confidence 23666777652 222221 112234556788875555665532 2
Q ss_pred eEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCceeeccccCCeEEE
Q 004067 338 KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVE 416 (776)
Q Consensus 338 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~ 416 (776)
...|.++++++...+.+...... .| .+++-++ ++.+|.++......|++++++|...+.+........
T Consensus 180 ~~~I~~~~~~g~~~~~l~~~~~~---------~P--~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P 248 (400)
T 3p5b_L 180 LGTVSVADTKGVKRKTLFRENGS---------KP--RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 248 (400)
T ss_dssp TTEEEEECTTTCSEEEEEECSSC---------CE--EEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCE
T ss_pred CCeEEEEeCCCCceEEEEeCCCC---------Cc--ceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCce
Confidence 33689999998777766543211 01 1112222 334555554333589999999987666644332222
Q ss_pred EEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC----CCeEEEEEcCCcCEEEEEeeCCCCCCEE
Q 004067 417 QIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG----KGKHVAVLDHNMRNFVDFHDSLDSPPRI 492 (776)
Q Consensus 417 ~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~----~~~~~~~~spdg~~l~~~~~~~~~~~~i 492 (776)
.-+.++++++.||+..... ..|+++++ +|. ..+.+... .....+++ ++..|.++-... ..|
T Consensus 249 ~glavd~~~~~lY~aD~~~----~~I~~~d~--dG~----~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~---~~V 313 (400)
T 3p5b_L 249 NGITLDLLSGRLYWVDSKL----HSISSIDV--NGG----NRKTILEDEKRLAHPFSLAV--FEDKVFWTDIIN---EAI 313 (400)
T ss_dssp EEEEEETTTTEEEEEETTT----TEEEEEET--TSC----CCEEEEECSSTTSSEEEEEE--ETTEEEEEESSS---CSE
T ss_pred EEEEEEeCCCEEEEEECCC----CEEEEEeC--CCC----ccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCC---CeE
Confidence 2345898899999987653 37999998 564 23333221 12334454 555666665433 358
Q ss_pred EEEEcCCCceeEee
Q 004067 493 LLCSLQDGSLVLPL 506 (776)
Q Consensus 493 ~~~~~~~~~~~~~l 506 (776)
++++..+|+..+.+
T Consensus 314 ~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 314 FSANRLTGSDVNLL 327 (400)
T ss_dssp EEEESSSCCCCEEE
T ss_pred EEEEcCCCCceEEE
Confidence 88886677655544
No 469
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.52 E-value=2.3e-07 Score=97.49 Aligned_cols=115 Identities=13% Similarity=-0.034 Sum_probs=69.6
Q ss_pred CceEEEEEcCCCCccc-----ccccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhh---hccCC--------
Q 004067 553 PYKTLISVYGGPCVQL-----VCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK---HNCGR-------- 616 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~-----~~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~---~~~~~-------- 616 (776)
..|.||++||..+... ....|...+..++..|.++||.|+++|++|+|.+......... ...+.
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 4467899999766421 1223422112367888999999999999999876432111000 00000
Q ss_pred ----ccHHHHHHHHHHHHHcCCCC-CCcEEEEeechHHHHHHHHHhh--------------------------CCCceEE
Q 004067 617 ----IDAEDQLTGAEWLIKQGLAK-VGHIGLYGWSYGGYLSAITLAR--------------------------FPDVFQC 665 (776)
Q Consensus 617 ----~~~~D~~~~i~~l~~~~~id-~~~i~l~G~S~GG~~a~~~a~~--------------------------~~~~~~~ 665 (776)
...+|+.+.+ +. .. ..++.|+||||||.++..++.. +|+++..
T Consensus 131 ~~~~~~a~dl~~ll----~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~s 204 (431)
T 2hih_A 131 YGHERYGKTYEGVL----KD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTS 204 (431)
T ss_dssp HTCCSEEEEECCSC----TT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEE
T ss_pred CCHHHHHHHHHHHH----HH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeE
Confidence 0001111111 11 12 3689999999999999998876 6888999
Q ss_pred EEEcCCCC
Q 004067 666 AVSGAPVT 673 (776)
Q Consensus 666 ~v~~~~~~ 673 (776)
++++++..
T Consensus 205 lv~i~tP~ 212 (431)
T 2hih_A 205 ITTIATPH 212 (431)
T ss_dssp EEEESCCT
T ss_pred EEEECCCC
Confidence 98887643
No 470
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.50 E-value=6.9e-05 Score=77.89 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=70.0
Q ss_pred c--CCCCEEEEEeCCCCcCcceEEEEecCCC--ceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcC-CeeeEEEeecCC
Q 004067 63 S--PDDNLITYLLSPDHSLSRKVFSFDPKTC--KQELVFSPPDGGLDENNISPEEKLRRERLRERGL-GVTRYEWVKTSS 137 (776)
Q Consensus 63 S--pDG~~ia~~~~~~~~~~~~l~~~~~~~~--~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~sp~~~ 137 (776)
| +|+++|+--...+ ..|+++|.++. +++.+-. |.+++-.. ..+. .-.....+|
T Consensus 90 ~~~~~r~~l~v~~l~s----~~I~viD~~t~p~~p~~~k~----------ie~~~~~~-----~~g~s~Ph~~~~~p--- 147 (462)
T 2ece_A 90 KPNIERRFLIVPGLRS----SRIYIIDTKPNPREPKIIKV----------IEPEEVKK-----VSGYSRLHTVHCGP--- 147 (462)
T ss_dssp CTTCCSCEEEEEBTTT----CCEEEEECCSCTTSCEEEEE----------ECHHHHHH-----HHCEEEEEEEEECS---
T ss_pred CCCccCCEEEEccCCC----CeEEEEECCCCCCCceeeee----------echhhccc-----ccCCCcccceeECC---
Confidence 8 9999887554433 57999998754 2222221 11111110 0011 123456778
Q ss_pred CceEEEEe--C------CCcEEEEeCCCCccceecCCCCC--CCccCceeCCCCCEEEEEE-------------------
Q 004067 138 KKKIIMVP--L------PDGIYFQDLSCSKPELKLSSSSC--SPVIDPHLSSDGTMIAFVR------------------- 188 (776)
Q Consensus 138 dg~~l~~~--~------~~~l~~~d~~~~~~~~~l~~~~~--~~~~~~~~SpDg~~la~~~------------------- 188 (776)
|| |+++ . .+.|.++|.++.+.+..+..+.. .....+.|+||++ +++++
T Consensus 148 dG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~ 224 (462)
T 2ece_A 148 DA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKD 224 (462)
T ss_dssp SC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHH
T ss_pred Ce--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhh
Confidence 99 4444 2 25699999999987745543322 1133477899999 45555
Q ss_pred --CCcEEEEecCCCceeE
Q 004067 189 --DCELHVLNLLINEQRQ 204 (776)
Q Consensus 189 --~~~l~~~~l~~g~~~~ 204 (776)
.+.|.++++++++..+
T Consensus 225 ~~~d~V~v~D~~~~k~~~ 242 (462)
T 2ece_A 225 RYGNRIHFWDLRKRKRIH 242 (462)
T ss_dssp HSCCEEEEEETTTTEEEE
T ss_pred ccCCEEEEEECCCCcEee
Confidence 3569999999886544
No 471
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.49 E-value=3.3e-05 Score=79.17 Aligned_cols=216 Identities=13% Similarity=0.036 Sum_probs=119.3
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCC-----CCCCCCHHHHHHHHHHHHhcCCeeeE
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGL-----DENNISPEEKLRRERLRERGLGVTRY 130 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (776)
.|..+.|+|||+. .|+.... ..|++++.++++.+.+........ +........ .......+
T Consensus 20 ~p~~i~~d~~g~~-l~v~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~p~gi 85 (322)
T 2fp8_A 20 APNSFTFDSTNKG-FYTSVQD----GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRP---------LCGRTYDI 85 (322)
T ss_dssp CCCCEECCTTCSS-EEEECTT----SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHH---------HHCCEEEE
T ss_pred CceEEEEcCCCCE-EEEEcCC----CeEEEECCCCCceEEEecccccccccccccccchhccc---------cCCCCceE
Confidence 4588999999874 4555433 469999998877655442110000 000000000 01234566
Q ss_pred EEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCC----CCCccCceeCC-CCCEEEEEEC---------------
Q 004067 131 EWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSS----CSPVIDPHLSS-DGTMIAFVRD--------------- 189 (776)
Q Consensus 131 ~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~----~~~~~~~~~Sp-Dg~~la~~~~--------------- 189 (776)
.+++ ++..|++. ....|+++|.++++.+ .+.... ......+.+.| ||+ |.+...
T Consensus 86 ~~~~---~~g~l~v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 86 SYNL---QNNQLYIVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp EEET---TTTEEEEEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHH
T ss_pred EEcC---CCCcEEEEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcc
Confidence 7775 55556666 4556999998887665 432211 11234578889 886 333321
Q ss_pred ----CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCC
Q 004067 190 ----CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSV 265 (776)
Q Consensus 190 ----~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 265 (776)
+.|++++.++++.+.+..... ...+++|+|||+.|++.....
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~~~------------------~p~gia~~~dg~~lyv~d~~~---------------- 206 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKELH------------------VPGGAEVSADSSFVLVAEFLS---------------- 206 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEEES------------------CCCEEEECTTSSEEEEEEGGG----------------
T ss_pred cCCCceEEEEeCCCCEEEEeccCCc------------------cCcceEECCCCCEEEEEeCCC----------------
Confidence 348888888887655432211 134788999999777654221
Q ss_pred CCCCcceecCCCCCCCCCeEEEEEEEcCCC---ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeec-------
Q 004067 266 GSEAQEDHAYPFAGASNVKVRLGVVSAAGG---PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS------- 335 (776)
Q Consensus 266 ~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~------- 335 (776)
..|++++++++ ....+... . + ...+.+.+||++ +.+....
T Consensus 207 -------------------~~I~~~~~~~~~~~~~~~~~~~------~---g-P~gi~~d~~G~l-~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 207 -------------------HQIVKYWLEGPKKGTAEVLVKI------P---N-PGNIKRNADGHF-WVSSSEELDGNMHG 256 (322)
T ss_dssp -------------------TEEEEEESSSTTTTCEEEEEEC------S---S-EEEEEECTTSCE-EEEEEEETTSSTTS
T ss_pred -------------------CeEEEEECCCCcCCccceEEeC------C---C-CCCeEECCCCCE-EEEecCcccccccC
Confidence 24677777653 22222110 1 1 456889999973 3333221
Q ss_pred CceEEEEEEECCCCceEEE
Q 004067 336 QTKLKVLKFDIKTGQRKVI 354 (776)
Q Consensus 336 ~~~~~l~~~d~~~g~~~~l 354 (776)
.....|+++|.++...+.+
T Consensus 257 ~~~~~v~~~d~~G~~~~~~ 275 (322)
T 2fp8_A 257 RVDPKGIKFDEFGNILEVI 275 (322)
T ss_dssp CEEEEEEEECTTSCEEEEE
T ss_pred CCccEEEEECCCCCEEEEE
Confidence 1246799999864333333
No 472
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.47 E-value=1.1e-05 Score=87.07 Aligned_cols=99 Identities=9% Similarity=0.034 Sum_probs=69.3
Q ss_pred ceeEcC-----CCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEE-
Q 004067 59 SIGFSP-----DDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEW- 132 (776)
Q Consensus 59 ~~~~Sp-----DG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~- 132 (776)
.|..|. ||++++-....+ ..|-++|+++.+...++..+. +.+...+.+
T Consensus 89 h~~~s~t~g~~DG~~lfVnd~~~----~rVavIdl~t~~~~~ii~ip~----------------------g~~phg~~~~ 142 (595)
T 1fwx_A 89 HVHMSFTEGKYDGRFLFMNDKAN----TRVARVRCDVMKCDAILEIPN----------------------AKGIHGLRPQ 142 (595)
T ss_dssp CEEEEEETTEEEEEEEEEEETTT----TEEEEEETTTTEEEEEEECSS----------------------CCSEEEEEEC
T ss_pred ccccCCCCCCcCCCEEEEEcCCC----CEEEEEECCCceEeeEEeCCC----------------------CCCCcceeee
Confidence 388888 999876543332 579999999999877665332 234566666
Q ss_pred e-ecCCCceEEEEeC-------------------CCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE
Q 004067 133 V-KTSSKKKIIMVPL-------------------PDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR 188 (776)
Q Consensus 133 s-p~~~dg~~l~~~~-------------------~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~ 188 (776)
+ | |+++++... ++.+-++|.++.+...++..+. .......||||+++..++
T Consensus 143 ~~p---~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 143 KWP---RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp CSS---BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEE
T ss_pred ecC---CCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEe
Confidence 5 8 999987772 1247789999877664443322 256789999999887776
No 473
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.42 E-value=2.4e-05 Score=79.66 Aligned_cols=233 Identities=10% Similarity=0.080 Sum_probs=134.1
Q ss_pred EEEEEECCcEEEEecCCCc--eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeec
Q 004067 183 MIAFVRDCELHVLNLLINE--QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQ 260 (776)
Q Consensus 183 ~la~~~~~~l~~~~l~~g~--~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 260 (776)
.|+|...++|..++++++. ...+..+... ..++.|.+.++.|++.....
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~------------------~~~ld~d~~~~~lyw~D~~~----------- 56 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLED------------------AAAVDFVFSHGLIYWSDVSE----------- 56 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEEE------------------EEEEEEEGGGTEEEEEETTT-----------
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCCc------------------cEEEEEEeCCCEEEEEECCC-----------
Confidence 5778777889999998774 3333221110 23678999888887754221
Q ss_pred CCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCce--EEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCce
Q 004067 261 GKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV--SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTK 338 (776)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 338 (776)
..|+.++++++.. ..+.. .......+++.+.+..|+++.. ..
T Consensus 57 ------------------------~~I~r~~~~g~~~~~~~~~~---------~l~~p~glavd~~~g~ly~~d~---~~ 100 (318)
T 3sov_A 57 ------------------------EAIKRTEFNKTESVQNVVVS---------GLLSPDGLACDWLGEKLYWTDS---ET 100 (318)
T ss_dssp ------------------------TEEEEEETTSSSCCCEEEEE---------CCSCCCEEEEETTTTEEEEEET---TT
T ss_pred ------------------------CcEEEEEccCCCceEEEEcC---------CCCCccEEEEEcCCCeEEEEEC---CC
Confidence 3467788877642 22211 1122345778876655665532 23
Q ss_pred EEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCceeeccccCCeEEEE
Q 004067 339 LKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQ 417 (776)
Q Consensus 339 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~~~~~ 417 (776)
..|.++++++...+.+...... .| .++..++ ++.+|.++......|++++++|...+.+.........
T Consensus 101 ~~I~~~~~dG~~~~~l~~~~~~---------~P--~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pn 169 (318)
T 3sov_A 101 NRIEVSNLDGSLRKVLFWQELD---------QP--RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 169 (318)
T ss_dssp TEEEEEETTSCSCEEEECSSCS---------SE--EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEE
T ss_pred CEEEEEECCCCcEEEEEeCCCC---------Cc--cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCcc
Confidence 4689999987766665432111 01 1112222 2344555543345899999998776655433322223
Q ss_pred EEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecC-C-CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEE
Q 004067 418 IVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-G-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLC 495 (776)
Q Consensus 418 ~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~-~-~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~ 495 (776)
-+.++++++.||+..... ..|+++++ +|. ..+.+.. . .....+++. +..+.++-.. ...|+++
T Consensus 170 glavd~~~~~lY~aD~~~----~~I~~~d~--dG~----~~~~~~~~~~~~P~glav~--~~~lywtd~~---~~~V~~~ 234 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKL----NFIHKSNL--DGT----NRQAVVKGSLPHPFALTLF--EDILYWTDWS---THSILAC 234 (318)
T ss_dssp EEEEETTTTEEEEEETTT----TEEEEEET--TSC----SCEEEECSCCSCEEEEEEE--TTEEEEEETT---TTEEEEE
T ss_pred EEEEeccCCEEEEEECCC----CEEEEEcC--CCC----ceEEEecCCCCCceEEEEe--CCEEEEEecC---CCeEEEE
Confidence 345999999999997654 37999998 564 2333332 1 224455664 4456665332 2478888
Q ss_pred EcCCCceeEee
Q 004067 496 SLQDGSLVLPL 506 (776)
Q Consensus 496 ~~~~~~~~~~l 506 (776)
+..+|+..+.+
T Consensus 235 ~~~~G~~~~~i 245 (318)
T 3sov_A 235 NKYTGEGLREI 245 (318)
T ss_dssp ETTTCCSCEEE
T ss_pred ECCCCCceEEE
Confidence 87777654444
No 474
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.41 E-value=3.7e-05 Score=78.26 Aligned_cols=199 Identities=11% Similarity=0.026 Sum_probs=123.0
Q ss_pred CeeeEEEeecCCCceEEEEe--CCCcEEEEeCCCCccce-ecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCC
Q 004067 126 GVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCSKPEL-KLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLIN 200 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~-~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g 200 (776)
....+.|++ .++.|+++ ..+.|++++++++.... .+...-. ....+++.+.+..|.++.. +.|+++++++.
T Consensus 36 ~~~~ld~d~---~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~-~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 36 DAAAVDFVF---SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEG---GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS-CCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccEEEEEEe---CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC-CccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 345788998 88889887 55679999999875321 2222211 2456788887777777653 46888888876
Q ss_pred ceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCC
Q 004067 201 EQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGA 280 (776)
Q Consensus 201 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (776)
..+.+..... ....+++..|++..|++.....
T Consensus 112 ~~~~l~~~~~-----------------~~P~giavdp~~g~ly~td~~~------------------------------- 143 (318)
T 3sov_A 112 LRKVLFWQEL-----------------DQPRAIALDPSSGFMYWTDWGE------------------------------- 143 (318)
T ss_dssp SCEEEECSSC-----------------SSEEEEEEEGGGTEEEEEECSS-------------------------------
T ss_pred cEEEEEeCCC-----------------CCccEEEEeCCCCEEEEEecCC-------------------------------
Confidence 6555543221 1134778889888777653210
Q ss_pred CCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccC
Q 004067 281 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD 360 (776)
Q Consensus 281 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 360 (776)
...|+++++++...+.+-. .....-..++|+|+++.|+++.. ....|+++|++++..+.+.....
T Consensus 144 ---~~~I~r~~~dG~~~~~~~~--------~~l~~Pnglavd~~~~~lY~aD~---~~~~I~~~d~dG~~~~~~~~~~~- 208 (318)
T 3sov_A 144 ---VPKIERAGMDGSSRFIIIN--------SEIYWPNGLTLDYEEQKLYWADA---KLNFIHKSNLDGTNRQAVVKGSL- 208 (318)
T ss_dssp ---SCEEEEEETTSCSCEEEEC--------SSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSCC-
T ss_pred ---CCEEEEEEcCCCCeEEEEE--------CCCCCccEEEEeccCCEEEEEEC---CCCEEEEEcCCCCceEEEecCCC-
Confidence 1357888888766555421 12234567999998877777643 34469999998777666653111
Q ss_pred ceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCc
Q 004067 361 SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGT 403 (776)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~ 403 (776)
..+.+++.+.+.+||+....+ .|++++..++
T Consensus 209 ----------~~P~glav~~~~lywtd~~~~--~V~~~~~~~G 239 (318)
T 3sov_A 209 ----------PHPFALTLFEDILYWTDWSTH--SILACNKYTG 239 (318)
T ss_dssp ----------SCEEEEEEETTEEEEEETTTT--EEEEEETTTC
T ss_pred ----------CCceEEEEeCCEEEEEecCCC--eEEEEECCCC
Confidence 111223344556666643344 8888887544
No 475
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.40 E-value=3e-05 Score=80.26 Aligned_cols=128 Identities=13% Similarity=-0.038 Sum_probs=73.8
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
.|..+++||||+.++-.....+. ...|+.++ +++......... ..+. ....+....+++
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~-~~~l~~~~--~g~~~~~p~~~~--~~~~---------------~~~~p~gv~~d~- 76 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQP-EMQVAELT--QDGLIPFPPQSG--NAII---------------TFDTVLGIKSDG- 76 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCC-SCSEEEEE--TTEEEESCCCCS--SCCC---------------CCSCEEEEEECS-
T ss_pred CcceEEECCCCCEEEEeCCCCCC-ceEEEEEC--CCCeecCCCccc--Cccc---------------ceeEeeEEEEcC-
Confidence 35889999999864432221111 14788888 455432221000 0000 113567889999
Q ss_pred CCCceEEEEeC------CCcEEEEeCCCCccceecCCCC-----CCCccCceeCCCCCEEEEEE-----CCcEEEEecCC
Q 004067 136 SSKKKIIMVPL------PDGIYFQDLSCSKPELKLSSSS-----CSPVIDPHLSSDGTMIAFVR-----DCELHVLNLLI 199 (776)
Q Consensus 136 ~~dg~~l~~~~------~~~l~~~d~~~~~~~~~l~~~~-----~~~~~~~~~SpDg~~la~~~-----~~~l~~~~l~~ 199 (776)
||+..+... ...|+++|+.+++....+.... ......++++|++..+.+.. .+.|+++++++
T Consensus 77 --~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 77 --NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp --SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred --CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 987444432 4689999999887442332211 11245678898766554442 24699999998
Q ss_pred CceeEEe
Q 004067 200 NEQRQLT 206 (776)
Q Consensus 200 g~~~~lt 206 (776)
|+..++.
T Consensus 155 g~~~r~~ 161 (343)
T 2qe8_A 155 GLAARVL 161 (343)
T ss_dssp CCEEEEC
T ss_pred CCEEEEe
Confidence 8776654
No 476
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.39 E-value=0.00043 Score=69.55 Aligned_cols=270 Identities=15% Similarity=0.073 Sum_probs=147.9
Q ss_pred CeeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCC-CCCCCccCceeCCCCCEEEEEE-CCcEEEEecCCCce
Q 004067 126 GVTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSS-SSCSPVIDPHLSSDGTMIAFVR-DCELHVLNLLINEQ 202 (776)
Q Consensus 126 ~~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~-~~~~~~~~~~~SpDg~~la~~~-~~~l~~~~l~~g~~ 202 (776)
....+.+++ ||+..+.. .++.|+++|.. ++.. .+.. ........+.++++|+..+... .+.|++++.+ |+.
T Consensus 21 ~p~~i~~d~---~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 21 GPYGITSSE---DGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp CEEEEEECT---TSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CcceeeECC---CCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 456777888 88855444 45789999988 5554 3221 1112356678889997433322 2469999988 666
Q ss_pred eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCC
Q 004067 203 RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASN 282 (776)
Q Consensus 203 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 282 (776)
+.+...... .....+++.|+|+ |++.....
T Consensus 95 ~~~~~~~~~----------------~~~~~i~~~~~g~-l~v~~~~~--------------------------------- 124 (300)
T 2qc5_A 95 TEYPLPQPD----------------SGPYGITEGLNGD-IWFTQLNG--------------------------------- 124 (300)
T ss_dssp EEEECSSTT----------------CCEEEEEECSTTC-EEEEETTT---------------------------------
T ss_pred EEecCCCCC----------------CCCccceECCCCC-EEEEccCC---------------------------------
Confidence 544332110 0134677888886 44433111
Q ss_pred CeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCce
Q 004067 283 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 362 (776)
Q Consensus 283 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 362 (776)
..|+.+|.+ ++...+.. .........+.+++||+ +++... ....|+++|. +++...+.......
T Consensus 125 --~~i~~~~~~-g~~~~~~~-------~~~~~~~~~i~~d~~g~-l~v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~- 188 (300)
T 2qc5_A 125 --DRIGKLTAD-GTIYEYDL-------PNKGSYPAFITLGSDNA-LWFTEN---QNNSIGRITN-TGKLEEYPLPTNAA- 188 (300)
T ss_dssp --TEEEEECTT-SCEEEEEC-------SSTTCCEEEEEECTTSS-EEEEET---TTTEEEEECT-TCCEEEEECSSTTC-
T ss_pred --CeEEEECCC-CCEEEccC-------CCCCCCceeEEECCCCC-EEEEec---CCCeEEEECC-CCcEEEeeCCCCCC-
Confidence 246778887 66555433 22334567889999998 444332 2335899998 56655432111100
Q ss_pred eecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCceeec-cccCCeEEEEEEeecCCCcEEEEEEccCCCcee
Q 004067 363 VNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 440 (776)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~-lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~ 440 (776)
.+..+..++ +.+++.....+ .|++++.++..... +.........+ .++++|+ ||+..... .
T Consensus 189 ---------~~~~i~~d~~g~l~v~~~~~~--~i~~~~~~g~~~~~~~~~~~~~~~~i-~~d~~g~-l~v~~~~~----~ 251 (300)
T 2qc5_A 189 ---------APVGITSGNDGALWFVEIMGN--KIGRITTTGEISEYDIPTPNARPHAI-TAGKNSE-IWFTEWGA----N 251 (300)
T ss_dssp ---------CEEEEEECTTSSEEEEETTTT--EEEEECTTCCEEEEECSSTTCCEEEE-EECSTTC-EEEEETTT----T
T ss_pred ---------CcceEEECCCCCEEEEccCCC--EEEEEcCCCcEEEEECCCCCCCceEE-EECCCCC-EEEeccCC----C
Confidence 011122333 34554444444 79999985443222 22222334444 3888887 66665433 3
Q ss_pred eEEEEEeCCCCCCccccceeecC---CCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEc
Q 004067 441 HLYCAKLYPDWNHTLEAPVKLTN---GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 497 (776)
Q Consensus 441 ~l~~~~~~~~g~~~~~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~ 497 (776)
.|++++. .|. ...+.. ......+.++++|+.++ ... . .|++++.
T Consensus 252 ~i~~~~~--~g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v--~~~-~---~i~~~~p 298 (300)
T 2qc5_A 252 QIGRITN--DNT-----IQEYQLQTENAEPHGITFGKDGSVWF--ALK-C---KIGKLNL 298 (300)
T ss_dssp EEEEECT--TSC-----EEEEECCSTTCCCCCEEECTTSCEEE--ECS-S---EEEEEEE
T ss_pred eEEEECC--CCc-----EEEEECCccCCccceeEeCCCCCEEE--Ecc-C---ceEEeCC
Confidence 5777776 342 223221 12355678899987333 222 1 5777764
No 477
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.39 E-value=5.8e-05 Score=73.62 Aligned_cols=205 Identities=12% Similarity=0.042 Sum_probs=121.4
Q ss_pred CCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecC
Q 004067 57 PTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTS 136 (776)
Q Consensus 57 ~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~ 136 (776)
+..+.|+||| +| |.+... .....|..+|+++++..+-...+ .......+++
T Consensus 23 ~~Gl~~~~dg-~L-yvstg~-~~~s~v~~iD~~tg~v~~~i~l~------------------------~~~fgeGi~~-- 73 (266)
T 2iwa_A 23 TQGLVYAEND-TL-FESTGL-YGRSSVRQVALQTGKVENIHKMD------------------------DSYFGEGLTL-- 73 (266)
T ss_dssp EEEEEECSTT-EE-EEEECS-TTTCEEEEEETTTCCEEEEEECC------------------------TTCCEEEEEE--
T ss_pred cccEEEeCCC-eE-EEECCC-CCCCEEEEEECCCCCEEEEEecC------------------------CCcceEEEEE--
Confidence 3688999996 44 444321 11368999999999875544311 1223334666
Q ss_pred CCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCcee-EEeeCCCC
Q 004067 137 SKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQR-QLTHGANG 211 (776)
Q Consensus 137 ~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~-~lt~~~~~ 211 (776)
+|++|+.. .++.++++|.++.+....+..+ . .....+++||++++ +++ +.|+++|+++.+.. .+.....+
T Consensus 74 -~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~--~~g~glt~Dg~~l~-vs~gs~~l~viD~~t~~v~~~I~Vg~~~ 148 (266)
T 2iwa_A 74 -LNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-M--KDGWGLATDGKILY-GSDGTSILYEIDPHTFKLIKKHNVKYNG 148 (266)
T ss_dssp -ETTEEEEEETTCSEEEEEETTTTEEEEEEECC-S--SSCCEEEECSSSEE-EECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred -eCCEEEEEEecCCEEEEEECCCCcEEEEEECC-C--CCeEEEEECCCEEE-EECCCCeEEEEECCCCcEEEEEEECCCC
Confidence 77888877 5778999999998776455443 1 22356889998865 554 46999999987653 33322111
Q ss_pred CceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEE
Q 004067 212 NTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 291 (776)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d 291 (776)
. . +...+.+.|. || +|+ ...-. ...|.++|
T Consensus 149 ~-p------------~~~~nele~~-dg-~ly-vn~~~----------------------------------~~~V~vID 178 (266)
T 2iwa_A 149 H-R------------VIRLNELEYI-NG-EVW-ANIWQ----------------------------------TDCIARIS 178 (266)
T ss_dssp E-E------------CCCEEEEEEE-TT-EEE-EEETT----------------------------------SSEEEEEE
T ss_pred c-c------------cccceeEEEE-CC-EEE-EecCC----------------------------------CCeEEEEE
Confidence 0 0 0012345677 66 454 44211 13589999
Q ss_pred cCCCce-EEEEcccCC----CCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC
Q 004067 292 AAGGPV-SWMDLQCGG----TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT 348 (776)
Q Consensus 292 ~~~~~~-~~l~~~~~~----~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 348 (776)
+++++. ..+.++... ............++|+||++.++.+... ...|+.+++..
T Consensus 179 ~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~---~~~v~~i~l~~ 237 (266)
T 2iwa_A 179 AKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL---WPKLFEIKLHL 237 (266)
T ss_dssp TTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT---CSEEEEEEEEE
T ss_pred CCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC---CCeEEEEEEec
Confidence 999885 445542100 0001112345789999999877666432 23466666543
No 478
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.35 E-value=1.8e-06 Score=89.29 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=65.5
Q ss_pred CceEEEEEcCCCCcccc----cccccccchhhhHHHHhCCcEEEEECCCCCCCCchhhhhhhhhccCCccHHHHHHHHHH
Q 004067 553 PYKTLISVYGGPCVQLV----CDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEW 628 (776)
Q Consensus 553 ~~p~vl~~HG~~~~~~~----~~~~~~~~~~~~~~l~~~G~~v~~~d~rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 628 (776)
..+.||++||..+.... ...|......+++.|+++||.|+++|++|+|.+... ..++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~~-------------a~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDR-------------ACEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHHH-------------HHHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcccc-------------HHHHHHHHHh
Confidence 33568899997654311 122422110245889999999999999998765321 0111111110
Q ss_pred --------HHHc---------------CCCCCCcEEEEeechHHHHHHHHHhh-------------------CC------
Q 004067 629 --------LIKQ---------------GLAKVGHIGLYGWSYGGYLSAITLAR-------------------FP------ 660 (776)
Q Consensus 629 --------l~~~---------------~~id~~~i~l~G~S~GG~~a~~~a~~-------------------~~------ 660 (776)
+.+. ......++.|+||||||.++..++.+ +|
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~ 151 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH 151 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccc
Confidence 1000 00134689999999999999999972 35
Q ss_pred CceEEEEEcCCC
Q 004067 661 DVFQCAVSGAPV 672 (776)
Q Consensus 661 ~~~~~~v~~~~~ 672 (776)
+++..+|.+++.
T Consensus 152 ~~V~sLV~i~tP 163 (387)
T 2dsn_A 152 HFVLSVTTIATP 163 (387)
T ss_dssp CCEEEEEEESCC
T ss_pred cceeEEEEECCC
Confidence 678888887654
No 479
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.00025 Score=80.94 Aligned_cols=226 Identities=9% Similarity=0.008 Sum_probs=138.0
Q ss_pred eEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEe--CCCcEEEEeCCCC-
Q 004067 82 KVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSCS- 158 (776)
Q Consensus 82 ~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~~- 158 (776)
.|+.+++++++..++... ......+.|++ .+..|+++ ..+.|+++++++.
T Consensus 405 ~Ir~i~l~~~~~~~l~~~------------------------~~~~~gl~~d~---~~~~lY~sD~~~~~I~~~~l~g~~ 457 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPN------------------------LRNVVALDTEV---ASNRIYWSDLSQRMICSTQLDRAH 457 (791)
T ss_dssp SEEEECTTSCCCEEEECS------------------------CSSEEEEEEET---TTTEEEEEETTTTEEEEEEC----
T ss_pred ceeEeeccCCcceeeecC------------------------CCceEEEeecc---cCCeeEEeeccceeEEEEeccCCC
Confidence 588999988777666531 13566788888 88888887 4467999999874
Q ss_pred ---ccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceE
Q 004067 159 ---KPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGY 233 (776)
Q Consensus 159 ---~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (776)
..+..+.... .....+++.+.++.|.++.. +.|+++++++...+.|...... ...++
T Consensus 458 ~~~~~~~vi~~~l-~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~-----------------~P~gI 519 (791)
T 3m0c_C 458 GVSSYDTVISRDI-QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----------------KPRAI 519 (791)
T ss_dssp ----CEEEECSSC-SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC-----------------CEEEE
T ss_pred CCcceeEEEecCC-CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC-----------------CcceE
Confidence 2331232222 23556888888888777654 4699999987776666543211 13478
Q ss_pred EECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCc
Q 004067 234 WWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDE 313 (776)
Q Consensus 234 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 313 (776)
+..|.+..|++..... ...|++.++++...+.+-. ...
T Consensus 520 aVDp~~g~LYwtD~g~----------------------------------~~~I~~~~~dG~~~~~lv~--------~~l 557 (791)
T 3m0c_C 520 VVDPVHGFMYWTDWGT----------------------------------PAKIKKGGLNGVDIYSLVT--------ENI 557 (791)
T ss_dssp EEETTTTEEEEEECSS----------------------------------SCEEEEEETTSCCEEEEEC--------SSC
T ss_pred EEecCCCCEEEecCCC----------------------------------CCeEEEEecCCCceEEEEe--------CCC
Confidence 8999888787654211 0347888888777665522 222
Q ss_pred ceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCce
Q 004067 314 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 393 (776)
Q Consensus 314 ~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~ 393 (776)
..-..++++++++.||++. . ....|+++++++...+.+..... .+ +.+.+++...+.+||+....+
T Consensus 558 ~~P~GLavD~~~~~LYwaD-~--~~~~I~~~d~dG~~~~~v~~~~~-~l--------~~P~glav~~~~lYwtD~~~~-- 623 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVD-S--KLHSISSIDVNGGNRKTILEDEK-RL--------AHPFSLAVFEDKVFWTDIINE-- 623 (791)
T ss_dssp SCEEEEEEETTTTEEEEEE-T--TTTEEEEEETTSCSCEEEEECTT-TT--------SSEEEEEEETTEEEEEETTTT--
T ss_pred CCceEEEEecCCCeEEEEe-C--CCCcEEEEecCCCceEEEecCCC-cc--------CCCCEEEEeCCEEEEEECCCC--
Confidence 3556789998877777664 2 23469999998887777764321 11 111122334555665544444
Q ss_pred EEEEEeCCCc-eeecc
Q 004067 394 HLYLHDINGT-CLGPI 408 (776)
Q Consensus 394 ~l~~~~~~g~-~~~~l 408 (776)
.|++++..++ ..+.|
T Consensus 624 ~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 624 AIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEEETTTCCCCEEE
T ss_pred EEEEEeCCCCcceEEe
Confidence 7888874433 33334
No 480
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.24 E-value=0.00021 Score=81.69 Aligned_cols=233 Identities=12% Similarity=0.036 Sum_probs=134.9
Q ss_pred EEEEEECCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCC
Q 004067 183 MIAFVRDCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGK 262 (776)
Q Consensus 183 ~la~~~~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 262 (776)
.|+|.....|+.+++++++..++...... ..++.|.+.++.|++.....
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~------------------~~gl~~d~~~~~lY~sD~~~------------- 445 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIPNLRN------------------VVALDTEVASNRIYWSDLSQ------------- 445 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEECSCSS------------------EEEEEEETTTTEEEEEETTT-------------
T ss_pred ccccccccceeEeeccCCcceeeecCCCc------------------eEEEeecccCCeeEEeeccc-------------
Confidence 56677677899999988877776543321 34678988888787654321
Q ss_pred CCCCCCCcceecCCCCCCCCCeEEEEEEEcCCC----ceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCce
Q 004067 263 SSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG----PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTK 338 (776)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 338 (776)
..|+.+++++. ....+- .........+++.+.++.||++. . ..
T Consensus 446 ----------------------~~I~~~~l~g~~~~~~~~~vi--------~~~l~~P~GLAvD~~~~~LY~tD-~--~~ 492 (791)
T 3m0c_C 446 ----------------------RMICSTQLDRAHGVSSYDTVI--------SRDIQAPDGLAVDWIHSNIYWTD-S--VL 492 (791)
T ss_dssp ----------------------TEEEEEEC--------CEEEE--------CSSCSCCCEEEEETTTTEEEEEE-T--TT
T ss_pred ----------------------eeEEEEeccCCCCCcceeEEE--------ecCCCCcceeeeeecCCcEEEEe-c--CC
Confidence 23566666653 222221 11222334578888887676654 2 23
Q ss_pred EEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccC-CeEEEEeccCCceEEEEEeCCCceeeccccCCe-EEE
Q 004067 339 LKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVE 416 (776)
Q Consensus 339 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~~~-~~~ 416 (776)
..|+++++++...+.+...... .| .+++.++ ++.+|+++......|++++++|...+.|..... ...
T Consensus 493 ~~I~v~~ldG~~~~~l~~~~l~---------~P--~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~ 561 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFRENGS---------KP--RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 561 (791)
T ss_dssp TEEEEEETTSSSEEEEEECTTC---------CE--EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CeEEEEeCCCCeEEEEEeCCCC---------Cc--ceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCce
Confidence 4699999998777766543211 01 1112222 234455554333589999999987766655432 233
Q ss_pred EEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC-C---CeEEEEEcCCcCEEEEEeeCCCCCCEE
Q 004067 417 QIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-K---GKHVAVLDHNMRNFVDFHDSLDSPPRI 492 (776)
Q Consensus 417 ~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~-~---~~~~~~~spdg~~l~~~~~~~~~~~~i 492 (776)
++ .+++.++.||+..... ..|+++++ +|. ..+.+... . ....+++ ++.+|.++-... ..|
T Consensus 562 GL-avD~~~~~LYwaD~~~----~~I~~~d~--dG~----~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~---~~I 625 (791)
T 3m0c_C 562 GI-TLDLLSGRLYWVDSKL----HSISSIDV--NGG----NRKTILEDEKRLAHPFSLAV--FEDKVFWTDIIN---EAI 625 (791)
T ss_dssp EE-EEETTTTEEEEEETTT----TEEEEEET--TSC----SCEEEEECTTTTSSEEEEEE--ETTEEEEEETTT---TEE
T ss_pred EE-EEecCCCeEEEEeCCC----CcEEEEec--CCC----ceEEEecCCCccCCCCEEEE--eCCEEEEEECCC---CEE
Confidence 33 4888888899986543 37999998 665 23333221 1 2234444 555666554332 468
Q ss_pred EEEEcCCCceeEee
Q 004067 493 LLCSLQDGSLVLPL 506 (776)
Q Consensus 493 ~~~~~~~~~~~~~l 506 (776)
++++..+|+.++.+
T Consensus 626 ~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 626 FSANRLTGSDVNLL 639 (791)
T ss_dssp EEEETTTCCCCEEE
T ss_pred EEEeCCCCcceEEe
Confidence 88887677655544
No 481
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.21 E-value=1.1e-05 Score=91.53 Aligned_cols=227 Identities=10% Similarity=0.016 Sum_probs=130.8
Q ss_pred ceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCCCceEEEEe--CCCcEEEEeCCC-
Q 004067 81 RKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSSKKKIIMVP--LPDGIYFQDLSC- 157 (776)
Q Consensus 81 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~dg~~l~~~--~~~~l~~~d~~~- 157 (776)
..|+++++++.+...+... ......+.|++ ++..|+++ ....|+++++++
T Consensus 386 ~~I~~id~~~~~~~~~~~~------------------------~~~p~gla~d~---~~~~Ly~sD~~~~~I~~~~~~g~ 438 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN------------------------LRNVVALDTEV---ASNRIYWSDLSQRMICSTQLDRA 438 (699)
T ss_dssp TC-CEECTTSCCEECCSCC------------------------CTTCCCCEEET---TTTEEEECCTTTTSBEEEESCCC
T ss_pred cceEEEeCCCCcceeeecc------------------------CcceEEEcccc---ccCeEEEEecCCCeEEEEecCCC
Confidence 3688889888776544421 12455678998 88889887 456899999987
Q ss_pred ---CccceecCCCCCCCccCceeCCCCCEEEEEE--CCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcce
Q 004067 158 ---SKPELKLSSSSCSPVIDPHLSSDGTMIAFVR--DCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTG 232 (776)
Q Consensus 158 ---~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~--~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (776)
.... .+..........+++.+.+..|+++. .+.|++++++++..+.+..... ....+
T Consensus 439 ~~~~~~~-~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~-----------------~~P~g 500 (699)
T 1n7d_A 439 HGVSSYD-TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQG-----------------SKPRA 500 (699)
T ss_dssp CC-CCCC-CBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSS-----------------CCCCC
T ss_pred CCCcceE-EEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCC-----------------CCcce
Confidence 3333 22211111245567777676665543 2468999988776655543221 11347
Q ss_pred EEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCC
Q 004067 233 YWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYD 312 (776)
Q Consensus 233 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 312 (776)
+++.|+++.|++..... ...|+++++++...+.+.. ..
T Consensus 501 iavDp~~g~ly~td~~~----------------------------------~~~I~~~~~dG~~~~~l~~--------~~ 538 (699)
T 1n7d_A 501 IVVDPVHGFMYWTDWGT----------------------------------PAKIKKGGLNGVDIYSLVT--------EN 538 (699)
T ss_dssp EECCSSSSCCEECCCSS----------------------------------SCCEEBCCSSSCCCCEESC--------SS
T ss_pred EEEccCCCcEEEcccCC----------------------------------CCeEEEEeCCCCCeeEEEe--------CC
Confidence 78999888776643110 0235666666544433311 11
Q ss_pred cceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCc
Q 004067 313 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 392 (776)
Q Consensus 313 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~ 392 (776)
...-..++|+|+++.|+++.. ....|+++++++...+.+.... ..+ +.+.+++.+++.+||+....+
T Consensus 539 l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~dG~~~~~~~~~~-~~~--------~~P~glavd~~~lywtd~~~~- 605 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGNRKTILEDE-KRL--------AHPFSLAVFEDKVFWTDIINE- 605 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEET---TTTEEEEECSSSSCCEEECCCS-SSC--------SSCCCCEEETTEEEEECSTTT-
T ss_pred CCCccEEEEeccCCEEEEEec---CCCeEEEEccCCCceEEEEecC-CcC--------CCceEeEEECCEEEEEeCCCC-
Confidence 122335899999887776642 2346999999876666554321 111 223344555666666553333
Q ss_pred eEEEEEeCCCce-eecc
Q 004067 393 RHLYLHDINGTC-LGPI 408 (776)
Q Consensus 393 ~~l~~~~~~g~~-~~~l 408 (776)
.|++++..+++ .+.|
T Consensus 606 -~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 606 -AIFSANRLTGSDVNLL 621 (699)
T ss_dssp -CEEEEETTTEEEEECC
T ss_pred -eEEEEEccCCCceEEe
Confidence 88889875444 3444
No 482
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.16 E-value=0.00035 Score=67.17 Aligned_cols=201 Identities=10% Similarity=-0.001 Sum_probs=117.2
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
..+.|+ || .|+......+ ...|.++|+++|+..+-...+ .....-..++
T Consensus 46 qGL~~~-~~-~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~------------------------~~~FgeGit~--- 94 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTGLNG--RSSIRKVDIESGKTLQQIELG------------------------KRYFGEGISD--- 94 (262)
T ss_dssp EEEEEE-TT-EEEEEEEETT--EEEEEEECTTTCCEEEEEECC------------------------TTCCEEEEEE---
T ss_pred ceEEEE-CC-EEEEECCCCC--CceEEEEECCCCcEEEEEecC------------------------CccceeEEEE---
Confidence 567888 65 5543332222 358999999999875444321 1233334567
Q ss_pred CceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEE-CCcEEEEecCCCcee-EEeeCCCCCc
Q 004067 138 KKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVR-DCELHVLNLLINEQR-QLTHGANGNT 213 (776)
Q Consensus 138 dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~-~~~l~~~~l~~g~~~-~lt~~~~~~~ 213 (776)
+|++|+.. .++.++++|.++.+....+.... ....+++||+.|+... .+.|+++|+++.+.. .+.....+ .
T Consensus 95 ~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g-~ 169 (262)
T 3nol_A 95 WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG-E 169 (262)
T ss_dssp ETTEEEEEESSSSEEEEEETTTCCEEEEEECSS----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT-E
T ss_pred eCCEEEEEEeeCCEEEEEECccCcEEEEEECCC----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC-c
Confidence 88888877 47889999999988774554322 3357778998765443 246999999987654 33221110 0
Q ss_pred eecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcC
Q 004067 214 VTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA 293 (776)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 293 (776)
. +...+.+.|. ||+ |+ +..-. ...|.++|++
T Consensus 170 ~------------~~~lNELe~~-~G~-ly-an~w~----------------------------------~~~I~vIDp~ 200 (262)
T 3nol_A 170 E------------LPELNELEWV-DGE-IF-ANVWQ----------------------------------TNKIVRIDPE 200 (262)
T ss_dssp E------------CCCEEEEEEE-TTE-EE-EEETT----------------------------------SSEEEEECTT
T ss_pred c------------ccccceeEEE-CCE-EE-EEEcc----------------------------------CCeEEEEECC
Confidence 0 0001235565 664 54 33211 1358999999
Q ss_pred CCce-EEEEcccCCCC---CCCCcceEEEEEeccCCeEEEEEEeecCceEEEEE
Q 004067 294 GGPV-SWMDLQCGGTD---QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLK 343 (776)
Q Consensus 294 ~~~~-~~l~~~~~~~~---~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~ 343 (776)
+|++ ..++++...+. ..........++|+|+++.++.+...-..-.+|.+
T Consensus 201 tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 201 TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 9986 45655321110 11223355789999999987777544333344433
No 483
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.13 E-value=0.00089 Score=67.76 Aligned_cols=235 Identities=11% Similarity=0.108 Sum_probs=118.1
Q ss_pred ccCceeCCCCCEEEEEE--CCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecC
Q 004067 172 VIDPHLSSDGTMIAFVR--DCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDS 249 (776)
Q Consensus 172 ~~~~~~SpDg~~la~~~--~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 249 (776)
...++|+|||+ |.++. .+.|++++.+++..+.+.. +.. ..+++++|||+ |++.....
T Consensus 34 pegia~~~~g~-lyv~d~~~~~I~~~d~~g~~~~~~~~-~~~------------------p~gia~~~dG~-l~vad~~~ 92 (306)
T 2p4o_A 34 LENLASAPDGT-IFVTNHEVGEIVSITPDGNQQIHATV-EGK------------------VSGLAFTSNGD-LVATGWNA 92 (306)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEECTTCCEEEEEEC-SSE------------------EEEEEECTTSC-EEEEEECT
T ss_pred cceEEECCCCC-EEEEeCCCCeEEEECCCCceEEEEeC-CCC------------------ceeEEEcCCCc-EEEEeccC
Confidence 55689999987 44443 2579999988754433322 210 33678999998 54433211
Q ss_pred CCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEE
Q 004067 250 SEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTA 329 (776)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~ 329 (776)
. ...|+.++..+++...+... ........+...+++. ++
T Consensus 93 ~---------------------------------~~~v~~~d~~~g~~~~~~~~-------~~~~~~~g~~~~~~~~-~~ 131 (306)
T 2p4o_A 93 D---------------------------------SIPVVSLVKSDGTVETLLTL-------PDAIFLNGITPLSDTQ-YL 131 (306)
T ss_dssp T---------------------------------SCEEEEEECTTSCEEEEEEC-------TTCSCEEEEEESSSSE-EE
T ss_pred C---------------------------------cceEEEEcCCCCeEEEEEeC-------CCccccCcccccCCCc-EE
Confidence 0 13467778888877655321 1112223444456664 33
Q ss_pred EEEeecCceEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCC-cee---
Q 004067 330 QVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDING-TCL--- 405 (776)
Q Consensus 330 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g-~~~--- 405 (776)
+. +. ....||++|..++..+.........-......+ ..+.+++.+++.+|++....+ .|+++++++ ++.
T Consensus 132 v~-d~--~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~-~~pngis~dg~~lyv~d~~~~--~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 132 TA-DS--YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF-PAANGLKRFGNFLYVSNTEKM--LLLRIPVDSTDKPGEP 205 (306)
T ss_dssp EE-ET--TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS-CSEEEEEEETTEEEEEETTTT--EEEEEEBCTTSCBCCC
T ss_pred EE-EC--CCCeEEEEeCCCCcEeEEEECCccccccccCCC-CcCCCcCcCCCEEEEEeCCCC--EEEEEEeCCCCCCCcc
Confidence 33 22 234799999987654332221110000000001 011122333333444443344 899999875 322
Q ss_pred eccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCC-CCeEEEEEc---CCcCEEEE
Q 004067 406 GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGKHVAVLD---HNMRNFVD 481 (776)
Q Consensus 406 ~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~-~~~~~~~~s---pdg~~l~~ 481 (776)
+.+... .....+ .++++|+ ||+..... ..|++++. +|.. ..+..+... .....+.|+ ||+++|..
T Consensus 206 ~~~~~~-~~P~gi-~vd~dG~-l~va~~~~----~~V~~~~~--~G~~--~~~~~~~~~~~~p~~~a~~g~~~d~~~LyV 274 (306)
T 2p4o_A 206 EIFVEQ-TNIDDF-AFDVEGN-LYGATHIY----NSVVRIAP--DRST--TIIAQAEQGVIGSTAVAFGQTEGDCTAIYV 274 (306)
T ss_dssp EEEEES-CCCSSE-EEBTTCC-EEEECBTT----CCEEEECT--TCCE--EEEECGGGTCTTEEEEEECCSTTTTTEEEE
T ss_pred EEEecc-CCCCCe-EECCCCC-EEEEeCCC----CeEEEECC--CCCE--EEEeecccccCCceEEEEecccCCCCEEEE
Confidence 111110 001122 3788886 55554433 25777776 4531 011122222 346678998 89888877
Q ss_pred EeeC
Q 004067 482 FHDS 485 (776)
Q Consensus 482 ~~~~ 485 (776)
+...
T Consensus 275 t~~~ 278 (306)
T 2p4o_A 275 VTNG 278 (306)
T ss_dssp EECT
T ss_pred ECCC
Confidence 7654
No 484
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.10 E-value=0.0016 Score=65.79 Aligned_cols=180 Identities=10% Similarity=0.050 Sum_probs=97.2
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeec
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 365 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 365 (776)
.|+.+|.+++....+.. ......+++++||+ ++++. .......|+.+|..+|+.+.+.......+...
T Consensus 54 ~I~~~d~~g~~~~~~~~----------~~~p~gia~~~dG~-l~vad-~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g 121 (306)
T 2p4o_A 54 EIVSITPDGNQQIHATV----------EGKVSGLAFTSNGD-LVATG-WNADSIPVVSLVKSDGTVETLLTLPDAIFLNG 121 (306)
T ss_dssp EEEEECTTCCEEEEEEC----------SSEEEEEEECTTSC-EEEEE-ECTTSCEEEEEECTTSCEEEEEECTTCSCEEE
T ss_pred eEEEECCCCceEEEEeC----------CCCceeEEEcCCCc-EEEEe-ccCCcceEEEEcCCCCeEEEEEeCCCccccCc
Confidence 47888887765444422 23566789999998 33332 22223468899998998877655322211110
Q ss_pred ccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeec------c---c-cCCe-EEEEEEeecCCCcEEEEEEcc
Q 004067 366 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGP------I---T-EGDW-MVEQIVGVNEASGQVYFTGTL 434 (776)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~------l---t-~~~~-~~~~~~~~s~dg~~i~~~~~~ 434 (776)
.. .+.++.+|+.....| .||+++.++++.+. + . .... .... .++||+.||+....
T Consensus 122 -~~--------~~~~~~~~v~d~~~g--~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~png---is~dg~~lyv~d~~ 187 (306)
T 2p4o_A 122 -IT--------PLSDTQYLTADSYRG--AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANG---LKRFGNFLYVSNTE 187 (306)
T ss_dssp -EE--------ESSSSEEEEEETTTT--EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEE---EEEETTEEEEEETT
T ss_pred -cc--------ccCCCcEEEEECCCC--eEEEEeCCCCcEeEEEECCccccccccCCCCcCCC---cCcCCCEEEEEeCC
Confidence 00 122333444333355 89999987653211 1 0 0111 1122 38899999998765
Q ss_pred CCCceeeEEEEEeCCCCCCccccceeecCCCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCce
Q 004067 435 DGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 502 (776)
Q Consensus 435 ~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~ 502 (776)
. ..|++++++..|. ......+........+.+++||+. |+..... ..|.+++. +|+.
T Consensus 188 ~----~~I~~~~~~~~g~--~~~~~~~~~~~~P~gi~vd~dG~l--~va~~~~--~~V~~~~~-~G~~ 244 (306)
T 2p4o_A 188 K----MLLLRIPVDSTDK--PGEPEIFVEQTNIDDFAFDVEGNL--YGATHIY--NSVVRIAP-DRST 244 (306)
T ss_dssp T----TEEEEEEBCTTSC--BCCCEEEEESCCCSSEEEBTTCCE--EEECBTT--CCEEEECT-TCCE
T ss_pred C----CEEEEEEeCCCCC--CCccEEEeccCCCCCeEECCCCCE--EEEeCCC--CeEEEECC-CCCE
Confidence 4 3688888732232 112222221122345789999963 4433322 35888886 4653
No 485
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=98.05 E-value=3.9e-05 Score=73.59 Aligned_cols=147 Identities=17% Similarity=0.092 Sum_probs=87.8
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCccccc-ccc---ccc-chh----h--hHHHHhCCcEEEEE
Q 004067 526 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC-DSW---INT-VDM----R--AQYLRSKGILVWKL 594 (776)
Q Consensus 526 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~-~~~---~~~-~~~----~--~~~l~~~G~~v~~~ 594 (776)
.+.+....+..+.+|++..... +...|+||+++||||+..+. ..+ ++. +.. + -.+--.+-..++.+
T Consensus 23 y~~v~~~~~~~lFywf~es~~~---~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfi 99 (255)
T 1whs_A 23 YITVDEGAGRSLFYLLQEAPED---AQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFL 99 (255)
T ss_dssp EEEEETTTTEEEEEEEECCCGG---GCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEE
T ss_pred EEECCCCCCcEEEEEEEEecCC---CCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEE
Confidence 4555544678899998876432 24679999999999987643 111 000 000 0 00001123789999
Q ss_pred CC-CCCCCCchhhhhhhhhccC-CccHHHHHHHHHHHHHc-CCCCCCcEEEEeechHHHHHHHHHhh----C--CCceEE
Q 004067 595 DN-RGTARRGLKFEASIKHNCG-RIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR----F--PDVFQC 665 (776)
Q Consensus 595 d~-rg~g~~~~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~----~--~~~~~~ 665 (776)
|. .|.|.|-...... ....+ .....|+..+++...++ +.....++.|+|.|+||..+..+|.. . .--+++
T Consensus 100 DqPvGtGfSy~~~~~~-~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkG 178 (255)
T 1whs_A 100 DSPAGVGFSYTNTSSD-IYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKG 178 (255)
T ss_dssp CCSTTSTTCEESSGGG-GGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred ecCCCCccCCCcCccc-cccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccce
Confidence 95 5888663221111 00011 12355666666655443 33455689999999999999888753 1 134789
Q ss_pred EEEcCCCCCcc
Q 004067 666 AVSGAPVTSWD 676 (776)
Q Consensus 666 ~v~~~~~~~~~ 676 (776)
+++.+|+++..
T Consensus 179 i~ign~~~d~~ 189 (255)
T 1whs_A 179 FMVGNGLIDDY 189 (255)
T ss_dssp EEEEEECCBHH
T ss_pred EEecCCccCHH
Confidence 99999988753
No 486
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.04 E-value=0.0019 Score=73.19 Aligned_cols=82 Identities=15% Similarity=-0.005 Sum_probs=45.1
Q ss_pred eEEEEEeCCCceeeccccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCCCeE--EE
Q 004067 393 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH--VA 470 (776)
Q Consensus 393 ~~l~~~~~~g~~~~~lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~~--~~ 470 (776)
..|+.+|+.+++...-........+.. ++.+|..+|+. +.+ ..++.+++. .|+ .+..+....++. -+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~-~~~~g~~v~~g-~~d----g~l~a~D~~-tG~----~lw~~~~~~~~~~~p~ 525 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGT-LTTAGNVVFQG-TAD----GRLVAYHAA-TGE----KLWEAPTGTGVVAAPS 525 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCE-EEETTTEEEEE-CTT----SEEEEEETT-TCC----EEEEEECSSCCCSCCE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcc-eEeCCCEEEEE-CCC----CcEEEEECC-CCc----eeeeeeCCCCcccCCE
Confidence 589999998877433221111111111 45566765554 433 367888874 343 444444333322 24
Q ss_pred EEcCCcCEEEEEeeC
Q 004067 471 VLDHNMRNFVDFHDS 485 (776)
Q Consensus 471 ~~spdg~~l~~~~~~ 485 (776)
.+++||+.++...+.
T Consensus 526 ~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 526 TYMVDGRQYVSVAVG 540 (677)
T ss_dssp EEEETTEEEEEEEEC
T ss_pred EEEeCCEEEEEEecc
Confidence 667999888777555
No 487
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.02 E-value=0.00099 Score=64.89 Aligned_cols=173 Identities=12% Similarity=-0.033 Sum_probs=99.8
Q ss_pred EEEEEEEcCCCceEE-EEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCcee
Q 004067 285 VRLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 363 (776)
Q Consensus 285 ~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 363 (776)
..|.++|+++++... +.++ .......+ +.+|+.|+.... ....++++|+++.+...-....
T Consensus 44 s~v~~iD~~tg~v~~~i~l~--------~~~fgeGi--~~~g~~lyv~t~---~~~~v~viD~~t~~v~~~i~~g----- 105 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMD--------DSYFGEGL--TLLNEKLYQVVW---LKNIGFIYDRRTLSNIKNFTHQ----- 105 (266)
T ss_dssp CEEEEEETTTCCEEEEEECC--------TTCCEEEE--EEETTEEEEEET---TCSEEEEEETTTTEEEEEEECC-----
T ss_pred CEEEEEECCCCCEEEEEecC--------CCcceEEE--EEeCCEEEEEEe---cCCEEEEEECCCCcEEEEEECC-----
Confidence 568999999998654 3221 11122233 444666666543 3446899999987754332211
Q ss_pred ecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCce-eeccccC--CeE---EEEEEeecCCCcEEEEEEccCCC
Q 004067 364 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEG--DWM---VEQIVGVNEASGQVYFTGTLDGP 437 (776)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~-~~~lt~~--~~~---~~~~~~~s~dg~~i~~~~~~~~~ 437 (776)
.+.+++++++++.+| .++. ...|+.+|+++.+ .+.+.-+ ... ...+. +. +| .+|+.....
T Consensus 106 ------~~~g~glt~Dg~~l~-vs~g--s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele-~~-dg-~lyvn~~~~-- 171 (266)
T 2iwa_A 106 ------MKDGWGLATDGKILY-GSDG--TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE-YI-NG-EVWANIWQT-- 171 (266)
T ss_dssp ------SSSCCEEEECSSSEE-EECS--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEE-EE-TT-EEEEEETTS--
T ss_pred ------CCCeEEEEECCCEEE-EECC--CCeEEEEECCCCcEEEEEEECCCCcccccceeEE-EE-CC-EEEEecCCC--
Confidence 023334456555554 5654 4599999998754 3444322 111 22333 55 55 566554332
Q ss_pred ceeeEEEEEeCCCCCCccccceeecCC--------------CCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCC
Q 004067 438 LESHLYCAKLYPDWNHTLEAPVKLTNG--------------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 499 (776)
Q Consensus 438 ~~~~l~~~~~~~~g~~~~~~~~~l~~~--------------~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~ 499 (776)
..|..+++. .|+ ....+... ...+.++++|+++++..+.... +.++++++..
T Consensus 172 --~~V~vID~~-tg~----V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~---~~v~~i~l~~ 237 (266)
T 2iwa_A 172 --DCIARISAK-DGT----LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW---PKLFEIKLHL 237 (266)
T ss_dssp --SEEEEEETT-TCC----EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---SEEEEEEEEE
T ss_pred --CeEEEEECC-CCc----EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC---CeEEEEEEec
Confidence 378999985 233 33344321 1347889999999877776443 5788888744
No 488
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.02 E-value=0.00049 Score=71.00 Aligned_cols=122 Identities=11% Similarity=-0.002 Sum_probs=73.5
Q ss_pred cCCCceeEcCCCCEEEEEeCCC-CcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEe
Q 004067 55 VAPTSIGFSPDDNLITYLLSPD-HSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWV 133 (776)
Q Consensus 55 ~~~~~~~~SpDG~~ia~~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s 133 (776)
..|..++++|||+ |.++.... ......|+++|+++++.......+.. +.. .......+.++
T Consensus 67 ~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~------~~~-----------~~~~~~~v~vd 128 (343)
T 2qe8_A 67 DTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP------ITL-----------SNSFVNDLAVD 128 (343)
T ss_dssp SCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT------TSC-----------TTCCCCEEEEE
T ss_pred eEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh------hcc-----------cccccceEEEe
Confidence 3467889999986 55544320 00025799999999885433322110 000 01234678889
Q ss_pred ecCCCceEEEEe-----CCCcEEEEeCCCCccceecCCCCC----------------------------CCccCceeCCC
Q 004067 134 KTSSKKKIIMVP-----LPDGIYFQDLSCSKPELKLSSSSC----------------------------SPVIDPHLSSD 180 (776)
Q Consensus 134 p~~~dg~~l~~~-----~~~~l~~~d~~~~~~~~~l~~~~~----------------------------~~~~~~~~SpD 180 (776)
| ++..++++ .+..|+++|+.+++..+.+..... .....++||||
T Consensus 129 ~---~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d 205 (343)
T 2qe8_A 129 L---IHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE 205 (343)
T ss_dssp T---TTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT
T ss_pred c---CCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC
Confidence 8 87777776 346799999988776522321000 01345789999
Q ss_pred CCEEEEEEC--CcEEEEec
Q 004067 181 GTMIAFVRD--CELHVLNL 197 (776)
Q Consensus 181 g~~la~~~~--~~l~~~~l 197 (776)
|+.|++... ..||.++.
T Consensus 206 g~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 206 NEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp SCEEEEEESSCSEEEEEEH
T ss_pred CCEEEEEeCCCCeEEEEEH
Confidence 988877754 36888775
No 489
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.96 E-value=0.00025 Score=72.53 Aligned_cols=253 Identities=12% Similarity=0.059 Sum_probs=131.4
Q ss_pred eeeEEEeecCCCceEEEEe-CCCcEEEEeCCCCccceecCCCC-------------------CCCccCceeCCCCCEEEE
Q 004067 127 VTRYEWVKTSSKKKIIMVP-LPDGIYFQDLSCSKPELKLSSSS-------------------CSPVIDPHLSSDGTMIAF 186 (776)
Q Consensus 127 ~~~~~~sp~~~dg~~l~~~-~~~~l~~~d~~~~~~~~~l~~~~-------------------~~~~~~~~~SpDg~~la~ 186 (776)
...+.|++ +|+.++.. .++.|+++|..+++.+ .+.... ......+.+.+++..|.+
T Consensus 21 p~~i~~d~---~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 21 PNSFTFDS---TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp CCCEECCT---TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred ceEEEEcC---CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 34577888 98855554 5678999999887654 332100 012345677873334444
Q ss_pred EE-CCcEEEEecCCCceeEEeeCCCCCceecCCcccceecccCCcceEEECC-CCCeEEEEEecCCCCCeEEEeecCCCC
Q 004067 187 VR-DCELHVLNLLINEQRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSS 264 (776)
Q Consensus 187 ~~-~~~l~~~~l~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~ 264 (776)
.. ...|++++++++..+.+...... ..+.....+++.| ||+ |++...... ...
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~-------------~~~~~p~~i~~d~~~G~-l~v~d~~~~-~~~---------- 151 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDG-------------VPFKWLYAVTVDQRTGI-VYFTDVSTL-YDD---------- 151 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETT-------------EECSCEEEEEECTTTCC-EEEEESCSS-CCT----------
T ss_pred EECCCCEEEEeCCCCEEEEecccCCC-------------CcccccceEEEecCCCE-EEEECCccc-ccc----------
Confidence 43 34588888887776655321110 0011134678999 885 555432110 000
Q ss_pred CCCCCcceecCCCCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEE
Q 004067 265 VGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKF 344 (776)
Q Consensus 265 ~~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~ 344 (776)
. ...+.. ........|+++|.++++...+... ......++|+|||+.|+++.. ....|+++
T Consensus 152 ---~---~~~~~~-~~~~~~g~v~~~d~~~~~~~~~~~~---------~~~p~gia~~~dg~~lyv~d~---~~~~I~~~ 212 (322)
T 2fp8_A 152 ---R---GVQQIM-DTSDKTGRLIKYDPSTKETTLLLKE---------LHVPGGAEVSADSSFVLVAEF---LSHQIVKY 212 (322)
T ss_dssp ---T---CHHHHH-HHTCCCEEEEEEETTTTEEEEEEEE---------ESCCCEEEECTTSSEEEEEEG---GGTEEEEE
T ss_pred ---c---ccceeh-cccCCCceEEEEeCCCCEEEEeccC---------CccCcceEECCCCCEEEEEeC---CCCeEEEE
Confidence 0 000000 0001125689999998876654221 112335899999987766543 23469999
Q ss_pred ECCCC---ceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccC---------CceEEEEEeCCCceeeccccCC
Q 004067 345 DIKTG---QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT---------GFRHLYLHDINGTCLGPITEGD 412 (776)
Q Consensus 345 d~~~g---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---------g~~~l~~~~~~g~~~~~lt~~~ 412 (776)
+++++ ..+.+... .. +.++..++++-+|+++.. ....|++++.+|.....+...+
T Consensus 213 ~~~~~~~~~~~~~~~~--~g-----------P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~ 279 (322)
T 2fp8_A 213 WLEGPKKGTAEVLVKI--PN-----------PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPP 279 (322)
T ss_dssp ESSSTTTTCEEEEEEC--SS-----------EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCT
T ss_pred ECCCCcCCccceEEeC--CC-----------CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCC
Confidence 98763 33333321 10 112233344434555432 1357999998876665554332
Q ss_pred ----eEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEe
Q 004067 413 ----WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 447 (776)
Q Consensus 413 ----~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~ 447 (776)
..+.... + ++..||+..... ..|.++++
T Consensus 280 g~~~~~~~~~~-~--~~g~L~v~~~~~----~~i~~~~~ 311 (322)
T 2fp8_A 280 PFAGEHFEQIQ-E--HDGLLYIGTLFH----GSVGILVY 311 (322)
T ss_dssp TTTTSCCCEEE-E--ETTEEEEECSSC----SEEEEEEC
T ss_pred CCccccceEEE-E--eCCEEEEeecCC----CceEEEec
Confidence 1122222 2 345677776543 25666665
No 490
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.96 E-value=0.0031 Score=71.34 Aligned_cols=80 Identities=11% Similarity=-0.028 Sum_probs=45.0
Q ss_pred EEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCcee-eccccCCeEEEE
Q 004067 339 LKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQ 417 (776)
Q Consensus 339 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~-~~lt~~~~~~~~ 417 (776)
..|+.+|+++|+..--.....+.|... ++ ..++++|+...+| .|+.+|+.+++. .++..+......
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~----------~~-~~g~~v~~g~~dg--~l~a~D~~tG~~lw~~~~~~~~~~~ 523 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGT----------LT-TAGNVVFQGTADG--RLVAYHAATGEKLWEAPTGTGVVAA 523 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCE----------EE-ETTTEEEEECTTS--EEEEEETTTCCEEEEEECSSCCCSC
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcc----------eE-eCCCEEEEECCCC--cEEEEECCCCceeeeeeCCCCcccC
Confidence 789999999998654444332222110 11 1344666666677 899999887653 334333222223
Q ss_pred EEeecCCCcEEEEE
Q 004067 418 IVGVNEASGQVYFT 431 (776)
Q Consensus 418 ~~~~s~dg~~i~~~ 431 (776)
+..++.+|+..+..
T Consensus 524 p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 524 PSTYMVDGRQYVSV 537 (677)
T ss_dssp CEEEEETTEEEEEE
T ss_pred CEEEEeCCEEEEEE
Confidence 33456777654433
No 491
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.96 E-value=4.7e-05 Score=86.44 Aligned_cols=144 Identities=11% Similarity=-0.052 Sum_probs=91.9
Q ss_pred cCCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCC----CceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeE
Q 004067 55 VAPTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKT----CKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRY 130 (776)
Q Consensus 55 ~~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~----~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (776)
..+..++|++++++|+|..... ..|+++++++ .....+.... ......+
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~----~~I~~~~~~g~~~~~~~~~~i~~~-----------------------~~~P~gl 458 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQ----RMICSTQLDRAHGVSSYDTVISRD-----------------------IQAPDGL 458 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTT----TSBEEEESCCCCC-CCCCCBCCSC-----------------------C--CCCE
T ss_pred cceEEEccccccCeEEEEecCC----CeEEEEecCCCCCCcceEEEEeCC-----------------------CCCcceE
Confidence 3467899999999998876543 4699999986 2222222100 0122345
Q ss_pred EEeecCCCceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC---CcEEEEecCCCceeEE
Q 004067 131 EWVKTSSKKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD---CELHVLNLLINEQRQL 205 (776)
Q Consensus 131 ~~sp~~~dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~---~~l~~~~l~~g~~~~l 205 (776)
++.+ .+..|+++ ..+.|++++++++..+ .+..........+++.|++..|.++.. ..|+++++++...+.+
T Consensus 459 avD~---~~g~LY~tD~~~~~I~v~d~dg~~~~-~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 459 AVDW---IHSNIYWTDSVLGTVSVADTKGVKRK-TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp ECCC---SSSBCEECCTTTSCEEEEBSSSCCEE-EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred EEEe---eCCcEEEEeccCCeEEEEecCCCceE-EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 6666 67777776 4567999999988766 443322223567889998877666542 4688888876655544
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQ 246 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~ 246 (776)
..... ....+++|+|++++|++..
T Consensus 535 ~~~~l-----------------~~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 535 VTENI-----------------QWPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp SCSSC-----------------SSCCCEEECTTTCCEEEEE
T ss_pred EeCCC-----------------CCccEEEEeccCCEEEEEe
Confidence 32211 1134789999999888754
No 492
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.95 E-value=0.0049 Score=65.52 Aligned_cols=153 Identities=10% Similarity=-0.004 Sum_probs=91.2
Q ss_pred eeeEEEeecCCC-ceEEEEeCC-CcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEECC------cEEEEecC
Q 004067 127 VTRYEWVKTSSK-KKIIMVPLP-DGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRDC------ELHVLNLL 198 (776)
Q Consensus 127 ~~~~~~sp~~~d-g~~l~~~~~-~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~~------~l~~~~l~ 198 (776)
...+.++| + +..|++... ..|+++|++++..+ .+... ......++|+++|+.|.+.... .++.++.+
T Consensus 139 P~~lavdp---~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~-~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 139 AVWLSFDP---KNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSG-LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCEEEEET---TEEEEEEEEEBTEEEEEEETTTTEEE-EEECC-CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCEEEECC---CCCCeEEEEeCCCcEEEEECCCCEEE-EEecC-CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 34567885 5 455666533 78999999998876 44332 2236678999999976555431 35555554
Q ss_pred CCce--eEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCC
Q 004067 199 INEQ--RQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYP 276 (776)
Q Consensus 199 ~g~~--~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (776)
++-. +.+... .....++++|++..|++.....
T Consensus 214 g~~~~~~~l~~~-------------------~~p~giavdp~~g~lyv~d~~~--------------------------- 247 (430)
T 3tc9_A 214 SGFKVITELTKG-------------------QNCNGAETHPINGELYFNSWNA--------------------------- 247 (430)
T ss_dssp GTSCSEEEEEEC-------------------SSCCCEEECTTTCCEEEEETTT---------------------------
T ss_pred CceeeeeeeccC-------------------CCceEEEEeCCCCEEEEEECCC---------------------------
Confidence 4322 222211 1134678999655676654211
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC
Q 004067 277 FAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT 348 (776)
Q Consensus 277 ~~g~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 348 (776)
..|++++.++++...+.. ......-..++|+|||+.|++... . ...|++++.++
T Consensus 248 --------~~V~~~~~~~~~~~~~~~-------~~~~~~P~gia~~pdG~~lyv~d~-~--~~~I~~~~~d~ 301 (430)
T 3tc9_A 248 --------GQVFRYDFTTQETTPLFT-------IQDSGWEFHIQFHPSGNYAYIVVV-N--QHYILRSDYDW 301 (430)
T ss_dssp --------TEEEEEETTTTEEEEEEE-------CSSSSCCEEEEECTTSSEEEEEET-T--TTEEEEEEEET
T ss_pred --------CEEEEEECCCCcEEEEEE-------cCCCCcceeEEEcCCCCEEEEEEC-C--CCEEEEEeCCc
Confidence 357899998887644322 112234557999999997766642 2 23577766653
No 493
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.94 E-value=0.0039 Score=60.33 Aligned_cols=212 Identities=14% Similarity=0.120 Sum_probs=122.7
Q ss_pred CCCceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeec
Q 004067 56 APTSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKT 135 (776)
Q Consensus 56 ~~~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~ 135 (776)
+++.++|.||+++|+.+.+.. ..|+.+|+++...+++.- .. ........+.+
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~----~~I~~ld~~g~v~~~i~l-~g----------------------~~D~EGIa~~~- 79 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKP----AAIVEMTTNGDLIRTIPL-DF----------------------VKDLETIEYIG- 79 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETT----EEEEEEETTCCEEEEEEC-SS----------------------CSSEEEEEECS-
T ss_pred CcceeEEeCCCCEEEEEECCC----CeEEEEeCCCCEEEEEec-CC----------------------CCChHHeEEeC-
Confidence 358899999999998877654 579999999444444431 00 02345677888
Q ss_pred CCCceEEEEe-CCCcEEEEeCCCCcc-c--eecC-----CCCCCCccCceeCCCCCEEEEEECC---cEEEEe--cCCCc
Q 004067 136 SSKKKIIMVP-LPDGIYFQDLSCSKP-E--LKLS-----SSSCSPVIDPHLSSDGTMIAFVRDC---ELHVLN--LLINE 201 (776)
Q Consensus 136 ~~dg~~l~~~-~~~~l~~~d~~~~~~-~--~~l~-----~~~~~~~~~~~~SpDg~~la~~~~~---~l~~~~--l~~g~ 201 (776)
+|..++.. .+..|+++++..... . .... .........++|+|++++|..+... .||.++ +.+..
T Consensus 80 --~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~ 157 (255)
T 3qqz_A 80 --DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNE 157 (255)
T ss_dssp --TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSC
T ss_pred --CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCc
Confidence 88764443 556788887654432 1 0111 0111124678999999988777654 477777 11111
Q ss_pred eeEEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCC
Q 004067 202 QRQLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS 281 (776)
Q Consensus 202 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 281 (776)
. .+..... +...-.+.-..++++.|....++..+...
T Consensus 158 l-~i~~~~~----------~~~~~~~~d~S~l~~dp~tg~lliLS~~s-------------------------------- 194 (255)
T 3qqz_A 158 L-HISKDKA----------LQRQFTLDDVSGAEFNQQKNTLLVLSHES-------------------------------- 194 (255)
T ss_dssp C-EEEECHH----------HHHTCCSSCCCEEEEETTTTEEEEEETTT--------------------------------
T ss_pred e-eeecchh----------hccccccCCceeEEEcCCCCeEEEEECCC--------------------------------
Confidence 1 2211100 00000011246888999988888877422
Q ss_pred CCeEEEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCC
Q 004067 282 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT 348 (776)
Q Consensus 282 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 348 (776)
..|..+|.++.....+.+..+...+......-..+++.++|+ |++++. . .-+|++...+
T Consensus 195 ---~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE-~---n~~y~f~~~~ 253 (255)
T 3qqz_A 195 ---RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSE-P---NRFYRFTPQS 253 (255)
T ss_dssp ---TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEET-T---TEEEEEEC--
T ss_pred ---CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcC-C---ceEEEEEecC
Confidence 347788888776666666432211112223456799999997 555542 2 2578776544
No 494
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.89 E-value=0.0079 Score=68.20 Aligned_cols=81 Identities=12% Similarity=0.055 Sum_probs=45.5
Q ss_pred eEEEEEeCCCceeec-cccCCeEEEEEEeecCCCcEEEEEEccCCCceeeEEEEEeCCCCCCccccceeecCCCCe--EE
Q 004067 393 RHLYLHDINGTCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK--HV 469 (776)
Q Consensus 393 ~~l~~~~~~g~~~~~-lt~~~~~~~~~~~~s~dg~~i~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~l~~~~~~--~~ 469 (776)
..|+.||+.+++... +..+....... ++..|..+ |..+.+ ..|+.++.. .|+ .+-++....++ .-
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~--~~tagglv-f~gt~d----g~l~a~D~~-tG~----~lw~~~~~~~~~~~p 522 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGT--LSTAGNLV-FEGSAD----GRVIAYAAD-TGE----KLWEQPAASGVMAAP 522 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCE--EEETTTEE-EEECTT----SEEEEEETT-TCC----EEEEEECSSCCCSCC
T ss_pred eeEEEEECCCCCeEeEccCCCCccCcc--ceECCCEE-EEECCC----CcEEEEECC-CCc----cceeeeCCCCcccCc
Confidence 479999998887543 22221111122 44556644 444443 367777874 354 44444433332 23
Q ss_pred EEEcCCcCEEEEEeeC
Q 004067 470 AVLDHNMRNFVDFHDS 485 (776)
Q Consensus 470 ~~~spdg~~l~~~~~~ 485 (776)
++++.||++++.+.+.
T Consensus 523 ~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 523 VTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred eEEEECCEEEEEEEec
Confidence 4678999988887765
No 495
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.89 E-value=0.00029 Score=76.00 Aligned_cols=91 Identities=8% Similarity=-0.005 Sum_probs=61.3
Q ss_pred CceEEEEeC--CCcEEEEeCCCCccce--ecCCCCCCCccCcee-C-CCCCEEEEEEC-------------------CcE
Q 004067 138 KKKIIMVPL--PDGIYFQDLSCSKPEL--KLSSSSCSPVIDPHL-S-SDGTMIAFVRD-------------------CEL 192 (776)
Q Consensus 138 dg~~l~~~~--~~~l~~~d~~~~~~~~--~l~~~~~~~~~~~~~-S-pDg~~la~~~~-------------------~~l 192 (776)
||+++++.. +..|-++|+++.+... .+..+. .....++ + ||++++..... +.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~--~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAK--GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCC--SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCC--CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 999999984 4559999999988662 222222 2556676 6 99999855531 137
Q ss_pred EEEecCCCcee-EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecC
Q 004067 193 HVLNLLINEQR-QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDS 249 (776)
Q Consensus 193 ~~~~l~~g~~~-~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 249 (776)
-++|.++.+.. |+...+. ...+..||||++++..+.+.
T Consensus 178 tvID~~t~~v~~qI~Vgg~-------------------pd~~~~spdGk~~~vt~~~s 216 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGN-------------------LDNCDADYEGKWAFSTSYNS 216 (595)
T ss_dssp EEEETTTTEEEEEEEESSC-------------------CCCEEECSSSSEEEEEESCT
T ss_pred EEEECCCCeEEEEEEeCCC-------------------ccceEECCCCCEEEEEecCc
Confidence 88898887653 4433332 23577999999887776543
No 496
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.86 E-value=0.0027 Score=67.50 Aligned_cols=140 Identities=9% Similarity=0.037 Sum_probs=87.1
Q ss_pred CCCceeEcCC--CCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEe
Q 004067 56 APTSIGFSPD--DNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWV 133 (776)
Q Consensus 56 ~~~~~~~SpD--G~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s 133 (776)
.|..++|+|| +..|++.... ..|+++++++++...+... ......+.++
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-----~~I~~id~~~g~v~~~~~~------------------------~~~P~giavd 190 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-----DAFRHVDFVNQYVDIKTTN------------------------IGQCADVNFT 190 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-----SCEEEEETTTTEEEEECCC------------------------CSCEEEEEEC
T ss_pred CCceEEEccccCCCEEEEEeCC-----CCEEEEECCCCEEEEeecC------------------------CCCccEEEEC
Confidence 4688999995 5667665442 4699999998888766531 1246678899
Q ss_pred ecCCCceEEEEeCC------CcEEEEeCCCCccc-eecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCce-e
Q 004067 134 KTSSKKKIIMVPLP------DGIYFQDLSCSKPE-LKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQ-R 203 (776)
Q Consensus 134 p~~~dg~~l~~~~~------~~l~~~d~~~~~~~-~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~-~ 203 (776)
+ ||+ |+++.. ..++.++..++... ..+.. ......+++.|++..|.+... +.|+++++++|.. +
T Consensus 191 ~---dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~--~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~ 264 (433)
T 4hw6_A 191 L---NGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCN--ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE 264 (433)
T ss_dssp T---TCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEE--CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE
T ss_pred C---CCC-EEEEcCCCCcccceEEEEECCCCeeccccccc--cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE
Confidence 9 999 766632 23666665544331 02221 123456889995444544432 4699999998876 4
Q ss_pred EEeeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEE
Q 004067 204 QLTHGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQ 246 (776)
Q Consensus 204 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~ 246 (776)
.+...+.. .| ...++|+|||++|++..
T Consensus 265 ~~~~~~~~--------~~--------~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 265 EEVMMDTK--------GS--------NFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp EEEECSCC--------SS--------CEEEEECTTSSEEEEEE
T ss_pred EEeccCCC--------CC--------cccEEEeCCCCEEEEEe
Confidence 44332211 01 12588999999777654
No 497
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.85 E-value=6.5e-05 Score=79.55 Aligned_cols=142 Identities=13% Similarity=0.050 Sum_probs=82.6
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcccccccccc--cchh------h--hHHHHhCCcEEEEECC-
Q 004067 528 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVDM------R--AQYLRSKGILVWKLDN- 596 (776)
Q Consensus 528 ~~~~~dg~~l~~~~~~P~~~~~~~~~~p~vl~~HG~~~~~~~~~~~~~--~~~~------~--~~~l~~~G~~v~~~d~- 596 (776)
.++..++..+.+|++..... +...|+||++|||||+..+...+.. .+.. + -.+--..-..++.+|.
T Consensus 25 yv~v~~~~~lfy~f~~s~~~---~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP 101 (452)
T 1ivy_A 25 YLKSSGSKHLHYWFVESQKD---PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESP 101 (452)
T ss_dssp EEECSTTEEEEEEEECCSSC---GGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCS
T ss_pred EEeeCCCCeEEEEEEEcCCC---CCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecC
Confidence 44555678899998865432 2457999999999998754211100 0000 0 0000123478999995
Q ss_pred CCCCCCchhhhhhhhhccCCccHHHHHHHHH-HHHHcCCCCCCcEEEEeechHHHHHHHHHhh----CCCceEEEEEcCC
Q 004067 597 RGTARRGLKFEASIKHNCGRIDAEDQLTGAE-WLIKQGLAKVGHIGLYGWSYGGYLSAITLAR----FPDVFQCAVSGAP 671 (776)
Q Consensus 597 rg~g~~~~~~~~~~~~~~~~~~~~D~~~~i~-~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~----~~~~~~~~v~~~~ 671 (776)
+|.|.|-.... ....-......|+..++. ++...+.....++.|+|+|+||..+..+|.. .+-.++++++.+|
T Consensus 102 ~GtGfS~~~~~--~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~ 179 (452)
T 1ivy_A 102 AGVGFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp TTSTTCEESSC--CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred CCCCcCCcCCC--CCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCC
Confidence 78887642110 000000012344444444 4444334456789999999999966666643 3456899999999
Q ss_pred CCC
Q 004067 672 VTS 674 (776)
Q Consensus 672 ~~~ 674 (776)
+++
T Consensus 180 ~~d 182 (452)
T 1ivy_A 180 LSS 182 (452)
T ss_dssp CSB
T ss_pred ccC
Confidence 876
No 498
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.83 E-value=0.0069 Score=68.69 Aligned_cols=82 Identities=9% Similarity=-0.071 Sum_probs=48.0
Q ss_pred eEEEEEEECCCCceEEEEEeccCceeecccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceee-ccccCCeEEE
Q 004067 338 KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG-PITEGDWMVE 416 (776)
Q Consensus 338 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~-~lt~~~~~~~ 416 (776)
...|+.||+++|+..--.....+.+.. .+ ...++++|+...+| .|+.+|.++|+.. ++..+.....
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g---~~--------~tagglvf~gt~dg--~l~a~D~~tG~~lw~~~~~~~~~~ 520 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGG---TL--------STAGNLVFEGSADG--RVIAYAADTGEKLWEQPAASGVMA 520 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCC---EE--------EETTTEEEEECTTS--EEEEEETTTCCEEEEEECSSCCCS
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCc---cc--------eECCCEEEEECCCC--cEEEEECCCCccceeeeCCCCccc
Confidence 378999999999876544443322210 11 12455778877777 8999998877643 3333322222
Q ss_pred EEEeecCCCcEEEEEE
Q 004067 417 QIVGVNEASGQVYFTG 432 (776)
Q Consensus 417 ~~~~~s~dg~~i~~~~ 432 (776)
.+..++.||++.+...
T Consensus 521 ~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 521 APVTYSVDGEQYVTFM 536 (689)
T ss_dssp CCEEEEETTEEEEEEE
T ss_pred CceEEEECCEEEEEEE
Confidence 3344677887544443
No 499
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.81 E-value=0.036 Score=64.30 Aligned_cols=293 Identities=9% Similarity=0.032 Sum_probs=153.4
Q ss_pred eeeEEEeecCCCceEEEEeCCCcEEEEeCCCCccceecCCC-CCCCccCceeCCCCCEEEEEECCcEEEEecCCCceeEE
Q 004067 127 VTRYEWVKTSSKKKIIMVPLPDGIYFQDLSCSKPELKLSSS-SCSPVIDPHLSSDGTMIAFVRDCELHVLNLLINEQRQL 205 (776)
Q Consensus 127 ~~~~~~sp~~~dg~~l~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~~~~SpDg~~la~~~~~~l~~~~l~~g~~~~l 205 (776)
+..+...+ +|+..+.+.++.|++++..+++.+ .+... ....+..+...++|...+-+..+-|++++..+++.+.+
T Consensus 175 i~~i~~d~---~g~lwigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~ 250 (795)
T 4a2l_A 175 IASTLYRQ---GDQIYIGTSTDGLYTYSITQKTFE-KVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNY 250 (795)
T ss_dssp CEEEEEEE---TTEEEEEESSSCEEEEETTTCCEE-ECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEE
T ss_pred eEEEEECC---CCCEEEEECCCCEEEEeCCCCeEE-EecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEe
Confidence 66677777 887555555567999999887765 44221 11224444455566544444345699999988877766
Q ss_pred eeCCCCCceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeE
Q 004067 206 THGANGNTVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 285 (776)
Q Consensus 206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 285 (776)
........ .++. ..+..+...++|. |...+..
T Consensus 251 ~~~~~~~~---~l~~-------~~i~~i~~d~~g~-lWigt~~------------------------------------- 282 (795)
T 4a2l_A 251 LHSPSNPK---SISS-------NYIRSLAMDSQNR-LWIGTFN------------------------------------- 282 (795)
T ss_dssp CCCTTCTT---SCSC-------SBEEEEEECTTSC-EEEEESS-------------------------------------
T ss_pred ecCCCCcc---ccCC-------CeEEEEEEcCCCC-EEEEeCC-------------------------------------
Confidence 54321000 0000 0123444555554 3333311
Q ss_pred EEEEEEcCCCceEEEEcccCCCCCCCCcceEEEEEeccCCeEEEEEEeecCceEEEEEEECCCCceEEEEEeccCceeec
Q 004067 286 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 365 (776)
Q Consensus 286 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 365 (776)
.|++++..+++...+......+. .-....+..+...++|.+. +.+. ..-|+.++..++..+.+.......-...
T Consensus 283 Gl~~~~~~~~~~~~~~~~~~~~~-~l~~~~i~~i~~D~~g~lW-igt~----~~Gl~~~~~~~~~~~~~~~~~~~~~l~~ 356 (795)
T 4a2l_A 283 DLNIYHEGTDSFASYSSNPVENG-SLSQRSVRSIFMDSQGGMW-LGTY----FGGLNYYHPIRNRFKNIRNIPYKNSLSD 356 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTSTT-SCSSSCEEEEEECTTSCEE-EEES----SSCEEEECGGGGSSEEECCCTTSSSCSC
T ss_pred hhheEcCCCCeEEEEecCCCCCC-CCCCCcEEEEEEeCCcCEE-EEEC----CCCeEEeCCCcccceEEcCCCCCCCCCC
Confidence 26788888887766643211110 1123457788888888733 3332 2237888887776655433211100000
Q ss_pred ccccccCCCCccccCCeEEEEeccCCceEEEEEeCCCceeeccccC---------CeEEEEEEeecCCCcEEEEEEccCC
Q 004067 366 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG---------DWMVEQIVGVNEASGQVYFTGTLDG 436 (776)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~g~~~~~lt~~---------~~~~~~~~~~s~dg~~i~~~~~~~~ 436 (776)
+... .+..+.++-+|+...++ .|++++..++..+.+... ...+..+. .+.+|+.|++.+...
T Consensus 357 ~~V~-----~i~~d~~g~lWiGt~~~--Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~-~d~~g~~lWigt~~~- 427 (795)
T 4a2l_A 357 NVVS-----CIVEDKDKNLWIGTNDG--GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVY-VDEKKSLVYIGTHAG- 427 (795)
T ss_dssp SSEE-----EEEECTTSCEEEEESSS--CEEEECTTTCCEEEECCC------CCSCSCEEEEE-EETTTTEEEEEETTT-
T ss_pred CeeE-----EEEECCCCCEEEEECCC--CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEE-EcCCCCEEEEEeCcC-
Confidence 0000 11223444455554443 488999887766555321 12344443 566776455544322
Q ss_pred CceeeEEEEEeCCCCCCccccceeecC------CCCeEEEEEcCCcCEEEEEeeCCCCCCEEEEEEcCCCce
Q 004067 437 PLESHLYCAKLYPDWNHTLEAPVKLTN------GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 502 (776)
Q Consensus 437 ~~~~~l~~~~~~~~g~~~~~~~~~l~~------~~~~~~~~~spdg~~l~~~~~~~~~~~~i~~~~~~~~~~ 502 (776)
.|+.++..+ + ..+.+.. ...+..+...++|+.++-+. . .|++++..+++.
T Consensus 428 ----Gl~~~d~~~-~-----~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~---~---Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 428 ----GLSILHRNS-G-----QVENFNQRNSQLVNENVYAILPDGEGNLWLGTL---S---ALVRFNPEQRSF 483 (795)
T ss_dssp ----EEEEEETTT-C-----CEEEECTTTSCCSCSCEEEEEECSSSCEEEEES---S---CEEEEETTTTEE
T ss_pred ----ceeEEeCCC-C-----cEEEeecCCCCcCCCeeEEEEECCCCCEEEEec---C---ceeEEeCCCCeE
Confidence 477777631 2 3344332 12356677788887665543 1 388888876653
No 500
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.79 E-value=0.0051 Score=58.59 Aligned_cols=190 Identities=15% Similarity=0.147 Sum_probs=113.0
Q ss_pred CceeEcCCCCEEEEEeCCCCcCcceEEEEecCCCceEEeecCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeeEEEeecCC
Q 004067 58 TSIGFSPDDNLITYLLSPDHSLSRKVFSFDPKTCKQELVFSPPDGGLDENNISPEEKLRRERLRERGLGVTRYEWVKTSS 137 (776)
Q Consensus 58 ~~~~~SpDG~~ia~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 137 (776)
..+.|++ .+|+......+ ...|..+|+++|+..+-...+. ....-..++
T Consensus 24 qGL~~~~--~~LyestG~~g--~S~v~~vD~~tgkv~~~~~l~~------------------------~~fgeGi~~--- 72 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGETG--RSSVRKVDLETGRILQRAEVPP------------------------PYFGAGIVA--- 72 (243)
T ss_dssp EEEEEET--TEEEEEECCTT--SCEEEEEETTTCCEEEEEECCT------------------------TCCEEEEEE---
T ss_pred ccEEEEC--CEEEEECCCCC--CceEEEEECCCCCEEEEEeCCC------------------------CcceeEEEE---
Confidence 4667775 45554433222 3689999999998755443221 233334566
Q ss_pred CceEEEEe--CCCcEEEEeCCCCccceecCCCCCCCccCceeCCCCCEEEEEEC--CcEEEEecCCCcee-EEeeCCCCC
Q 004067 138 KKKIIMVP--LPDGIYFQDLSCSKPELKLSSSSCSPVIDPHLSSDGTMIAFVRD--CELHVLNLLINEQR-QLTHGANGN 212 (776)
Q Consensus 138 dg~~l~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~SpDg~~la~~~~--~~l~~~~l~~g~~~-~lt~~~~~~ 212 (776)
+|++|+.. .++.++++|.++.+....+.... ....+++||++| |+++ +.|+++|+++.+.. .+.....+
T Consensus 73 ~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~----~Gwglt~dg~~L-~vSdgs~~l~~iDp~t~~~~~~I~V~~~g- 146 (243)
T 3mbr_X 73 WRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG----EGWALTSDDSHL-YMSDGTAVIRKLDPDTLQQVGSIKVTAGG- 146 (243)
T ss_dssp ETTEEEEEESSSSEEEEEETTTTEEEEEEECSS----CCCEEEECSSCE-EEECSSSEEEEECTTTCCEEEEEECEETT-
T ss_pred eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC----CceEEeeCCCEE-EEECCCCeEEEEeCCCCeEEEEEEEccCC-
Confidence 78888876 57889999999988774554322 235777899865 4454 46999999987653 33222111
Q ss_pred ceecCCcccceecccCCcceEEECCCCCeEEEEEecCCCCCeEEEeecCCCCCCCCCcceecCCCCCCCCCeEEEEEEEc
Q 004067 213 TVTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 292 (776)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~d~ 292 (776)
.+ +...+.+.|. ||+ |+ +..-.+ ..|.++|+
T Consensus 147 -----~~-------~~~lNeLe~~-~G~-ly-anvw~s----------------------------------~~I~vIDp 177 (243)
T 3mbr_X 147 -----RP-------LDNLNELEWV-NGE-LL-ANVWLT----------------------------------SRIARIDP 177 (243)
T ss_dssp -----EE-------CCCEEEEEEE-TTE-EE-EEETTT----------------------------------TEEEEECT
T ss_pred -----cc-------cccceeeEEe-CCE-EE-EEECCC----------------------------------CeEEEEEC
Confidence 00 0011234454 554 43 432110 35899999
Q ss_pred CCCce-EEEEcccCCCCC----CCCcceEEEEEeccCCeEEEEEEe
Q 004067 293 AGGPV-SWMDLQCGGTDQ----NYDEEYLARVNWMHGNILTAQVLN 333 (776)
Q Consensus 293 ~~~~~-~~l~~~~~~~~~----~~~~~~~~~~~~SpDg~~l~~~~~ 333 (776)
++|++ ..+++....+.. .........++|+|+++.++.+.-
T Consensus 178 ~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 178 ASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 99986 456654221111 122345678999999987776653
Done!