Query 004068
Match_columns 775
No_of_seqs 456 out of 3261
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 13:13:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004068.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004068hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a8c_A Periplasmic PH-dependen 100.0 1E-50 3.5E-55 458.2 48.0 395 286-747 17-433 (436)
2 4fln_A Protease DO-like 2, chl 100.0 1.4E-49 4.7E-54 454.8 44.3 395 289-740 44-478 (539)
3 3pv2_A DEGQ; trypsin fold, PDZ 100.0 9.5E-51 3.2E-55 459.8 31.6 395 286-742 23-451 (451)
4 1ky9_A Protease DO, DEGP, HTRA 100.0 2.1E-48 7.1E-53 440.3 19.2 357 316-742 86-448 (448)
5 3stj_A Protease DEGQ; serine p 100.0 8.9E-40 3E-44 358.1 31.3 301 286-642 17-336 (345)
6 1te0_A Protease DEGS; two doma 100.0 8.2E-37 2.8E-41 331.2 30.3 300 286-640 13-315 (318)
7 3qo6_A Protease DO-like 1, chl 100.0 2.2E-35 7.6E-40 323.8 28.4 299 286-641 21-334 (348)
8 1y8t_A Hypothetical protein RV 100.0 9E-35 3.1E-39 315.9 31.0 294 285-641 9-315 (324)
9 1lcy_A HTRA2 serine protease; 100.0 9.5E-35 3.3E-39 315.9 27.8 301 286-638 19-322 (325)
10 3num_A Serine protease HTRA1; 100.0 1.4E-35 4.9E-40 323.3 20.7 303 286-641 18-323 (332)
11 1l1j_A Heat shock protease HTR 99.9 4.3E-25 1.5E-29 229.8 16.9 211 286-534 8-239 (239)
12 3lgi_A Protease DEGS; stress-s 99.9 2.9E-24 1E-28 223.1 22.7 206 285-515 23-230 (237)
13 3sti_A Protease DEGQ; serine p 99.9 4.2E-25 1.4E-29 230.6 16.4 202 286-513 17-236 (245)
14 3tjo_A Serine protease HTRA1; 99.9 1.6E-23 5.3E-28 216.9 18.8 194 286-510 35-230 (231)
15 3k6y_A Serine protease, possib 99.9 1.5E-20 5.2E-25 194.8 21.3 192 285-513 34-229 (237)
16 3rle_A Golgi reassembly-stacki 99.8 7.2E-19 2.5E-23 179.1 17.2 167 563-746 13-184 (209)
17 3gsl_A Disks large homolog 4; 99.7 1E-16 3.6E-21 160.0 19.6 153 565-737 34-193 (196)
18 2w5e_A Putative serine proteas 99.7 5.7E-16 1.9E-20 151.6 16.7 127 314-477 19-146 (163)
19 1p1d_A PDZ45, glutamate recept 99.7 4E-16 1.4E-20 156.9 16.0 147 566-734 36-195 (196)
20 2qt5_A Glutamate receptor-inte 99.7 2.5E-15 8.4E-20 151.4 18.5 148 566-736 33-197 (200)
21 3r0h_A INAD, inactivation-NO-a 99.6 3.5E-15 1.2E-19 150.7 17.0 138 566-732 45-194 (206)
22 1w9e_A Syntenin 1; cell adhesi 99.6 9E-16 3.1E-20 150.3 10.1 115 566-710 27-143 (166)
23 2l97_A HTRA, putative serine p 99.6 1.7E-15 6E-20 143.4 9.1 122 489-641 3-128 (134)
24 2as9_A Serine protease; trypsi 99.5 3.2E-14 1.1E-18 144.5 11.9 165 316-511 23-204 (210)
25 2h5c_A Alpha-lytic protease; s 99.5 8.1E-13 2.8E-17 133.3 16.3 167 316-505 16-191 (198)
26 2xkx_A Disks large homolog 4; 99.4 6.4E-12 2.2E-16 150.0 16.8 152 566-737 89-247 (721)
27 3suz_A Amyloid beta A4 precurs 99.3 4.9E-13 1.7E-17 148.4 4.0 132 567-729 233-370 (388)
28 2w7s_A Serine protease SPLA; h 99.3 4.2E-12 1.4E-16 127.4 10.5 161 316-508 22-197 (200)
29 1agj_A Epidermolytic toxin A; 99.3 1.6E-11 5.4E-16 127.1 14.7 167 316-508 55-240 (242)
30 2oua_A Serine protease, protei 99.3 1.7E-11 6E-16 122.6 14.3 162 316-505 14-182 (188)
31 2xkx_A Disks large homolog 4; 99.3 5E-11 1.7E-15 142.3 18.6 156 566-733 184-390 (721)
32 1hpg_A Glutamic acid specific 99.3 5.1E-11 1.7E-15 119.0 14.6 162 317-505 14-182 (187)
33 2o8l_A V8 protease, taphylococ 99.2 1.8E-10 6.2E-15 121.8 18.8 175 293-511 20-212 (274)
34 1uf1_A KIAA1526 protein; PDZ d 99.2 5.7E-12 1.9E-16 118.0 6.4 113 616-749 7-119 (128)
35 2pzd_A Serine protease HTRA2; 99.2 3.1E-11 1.1E-15 110.3 10.2 101 650-754 6-111 (113)
36 1qtf_A Exfoliative toxin B; se 99.2 5.8E-11 2E-15 123.4 11.6 138 315-475 47-203 (246)
37 2vid_A Serine protease SPLB; h 99.2 1.8E-10 6E-15 115.5 13.5 164 316-509 22-202 (204)
38 1wcz_A Glutamyl endopeptidase; 99.2 5E-10 1.7E-14 118.0 16.7 166 315-511 33-212 (268)
39 2l97_A HTRA, putative serine p 99.2 2.5E-10 8.6E-15 107.9 12.8 94 649-745 28-126 (134)
40 2ea3_A Chymotrypsin; celloulom 99.1 2.4E-10 8.1E-15 114.4 13.1 153 317-505 17-176 (189)
41 2pfe_A Protease A, alkaline se 99.1 5.1E-10 1.7E-14 111.7 12.6 156 318-505 17-179 (186)
42 2i6v_A General secretion pathw 99.1 3.6E-10 1.2E-14 98.5 8.9 67 675-742 20-86 (87)
43 2pzd_A Serine protease HTRA2; 99.1 3.7E-10 1.2E-14 103.2 9.0 100 522-640 3-103 (113)
44 3i18_A LMO2051 protein; alpha- 99.1 9E-10 3.1E-14 98.6 11.2 69 674-744 7-75 (100)
45 2p3w_A Probable serine proteas 99.0 5.6E-10 1.9E-14 101.8 9.9 91 650-744 6-101 (112)
46 2p3w_A Probable serine proteas 99.0 5.7E-10 1.9E-14 101.8 8.9 97 531-641 7-104 (112)
47 3stj_A Protease DEGQ; serine p 99.0 1.3E-09 4.3E-14 119.2 12.7 94 649-744 239-332 (345)
48 2qa9_E Streptogrisin-B; chymot 99.0 3.4E-09 1.1E-13 105.1 14.0 167 316-506 12-181 (185)
49 2kjp_A Uncharacterized protein 99.0 1.5E-10 5E-15 102.1 3.0 69 675-745 2-70 (91)
50 2kl1_A YLBL protein; structure 99.0 8.8E-10 3E-14 97.6 7.8 70 674-745 5-74 (94)
51 2i4s_A General secretion pathw 99.0 1.6E-09 5.6E-14 97.8 9.2 67 675-742 38-104 (105)
52 3id1_A Regulator of sigma E pr 98.9 3.4E-09 1.1E-13 94.1 10.2 68 677-745 5-74 (95)
53 3id1_A Regulator of sigma E pr 98.9 2.5E-09 8.6E-14 94.9 9.3 86 569-658 5-94 (95)
54 3i18_A LMO2051 protein; alpha- 98.9 3.7E-09 1.3E-13 94.5 10.0 74 565-642 6-79 (100)
55 3pv2_A DEGQ; trypsin fold, PDZ 98.9 6.8E-09 2.3E-13 117.3 13.6 96 649-745 257-352 (451)
56 1te0_A Protease DEGS; two doma 98.9 2.8E-09 9.6E-14 115.0 9.8 94 650-745 221-314 (318)
57 2vz5_A TAX1-binding protein 3; 98.9 5.4E-09 1.8E-13 99.3 10.6 69 673-743 63-133 (139)
58 2zpm_A Regulator of sigma E pr 98.9 3.6E-09 1.2E-13 92.5 8.5 68 675-744 5-72 (91)
59 2eaq_A LIM domain only protein 98.9 2.9E-09 1E-13 92.9 6.7 60 675-735 29-90 (90)
60 3cyy_A Tight junction protein 98.8 7.2E-09 2.5E-13 90.6 8.8 66 675-743 24-92 (92)
61 2kl1_A YLBL protein; structure 98.8 5.7E-09 1.9E-13 92.4 7.8 72 566-641 5-76 (94)
62 4a8c_A Periplasmic PH-dependen 98.8 1.6E-08 5.4E-13 113.9 13.4 96 649-746 239-334 (436)
63 1qau_A Neuronal nitric oxide s 98.8 1.3E-08 4.4E-13 92.6 10.2 70 674-745 26-98 (112)
64 2pkt_A PDZ and LIM domain prot 98.8 4.8E-09 1.7E-13 91.8 6.3 60 675-737 28-89 (91)
65 1mbm_A NSP4 proteinase, chymot 98.8 1E-08 3.5E-13 100.2 8.9 118 313-475 12-130 (198)
66 2i6v_A General secretion pathw 98.8 1.2E-08 4.2E-13 88.7 8.6 68 566-637 19-87 (87)
67 2kjp_A Uncharacterized protein 98.8 1.2E-09 4.3E-14 96.1 1.8 70 568-641 3-72 (91)
68 2pa1_A PDZ and LIM domain prot 98.8 1.9E-08 6.7E-13 87.1 8.8 58 675-735 27-86 (87)
69 2vsp_A PDZ domain-containing p 98.8 9.5E-09 3.2E-13 90.0 6.8 60 674-736 27-88 (91)
70 2v90_A PDZ domain-containing p 98.7 7.3E-09 2.5E-13 91.5 5.7 60 674-736 30-91 (96)
71 1lcy_A HTRA2 serine protease; 98.7 2.4E-08 8.1E-13 108.1 10.8 91 650-744 227-322 (325)
72 2w4f_A Protein LAP4; structura 98.7 1.2E-08 4.2E-13 90.1 6.9 62 674-736 34-95 (97)
73 1wh1_A KIAA1095 protein; PDZ d 98.7 6.4E-09 2.2E-13 96.7 5.3 65 674-740 48-113 (124)
74 2jil_A GRIP1 protein, glutamat 98.7 1.4E-08 4.9E-13 89.8 7.3 60 674-736 32-94 (97)
75 1y8t_A Hypothetical protein RV 98.7 3.4E-08 1.2E-12 106.7 11.2 70 674-744 242-312 (324)
76 2sga_A Proteinase A; hydrolase 98.7 3.2E-08 1.1E-12 97.7 9.8 158 316-505 12-176 (181)
77 2zpm_A Regulator of sigma E pr 98.7 4.4E-08 1.5E-12 85.5 9.5 66 569-639 7-73 (91)
78 3qik_A Phosphatidylinositol 3, 98.7 2E-08 7E-13 89.6 7.3 57 675-731 40-99 (101)
79 2dls_A PDZ-rhogef, RHO guanine 98.7 2.4E-08 8.2E-13 87.9 7.4 58 675-734 30-87 (93)
80 3tsv_A Tight junction protein 98.7 2.6E-08 8.8E-13 92.7 7.9 60 675-735 52-113 (124)
81 2koj_A Partitioning defective 98.7 3.6E-08 1.2E-12 89.4 8.6 62 674-736 39-103 (111)
82 2uzc_A Human pdlim5, PDZ and L 98.7 4E-08 1.4E-12 85.2 8.5 58 675-735 28-87 (88)
83 2i4s_A General secretion pathw 98.7 5.2E-08 1.8E-12 87.8 9.4 68 566-637 37-105 (105)
84 2jxo_A Ezrin-radixin-moesin-bi 98.7 1.6E-08 5.4E-13 89.7 5.9 60 674-735 33-94 (98)
85 1ihj_A INAD; intermolecular di 98.7 4.2E-08 1.4E-12 86.9 8.6 59 674-735 37-98 (98)
86 2hga_A Conserved protein MTH13 98.7 3.8E-08 1.3E-12 91.8 8.7 67 673-743 24-90 (125)
87 2kom_A Partitioning defective 98.7 5.8E-08 2E-12 89.9 9.7 61 674-735 58-121 (121)
88 2eeh_A PDZ domain-containing p 98.7 2.2E-08 7.6E-13 89.2 6.5 58 674-735 36-95 (100)
89 2i04_A Membrane-associated gua 98.7 6.2E-08 2.1E-12 83.4 9.1 56 674-729 25-83 (85)
90 3sfj_A TAX1-binding protein 3; 98.7 9.7E-08 3.3E-12 85.5 10.6 58 673-732 44-103 (104)
91 2fcf_A Multiple PDZ domain pro 98.7 5.8E-08 2E-12 86.8 9.0 59 674-735 39-100 (103)
92 2he4_A Na(+)/H(+) exchange reg 98.7 5.4E-08 1.8E-12 84.9 8.4 58 674-734 28-87 (90)
93 3khf_A Microtubule-associated 98.7 6E-08 2.1E-12 86.1 8.8 58 675-735 35-94 (99)
94 3qo6_A Protease DO-like 1, chl 98.6 3.6E-08 1.2E-12 107.7 8.6 70 674-744 251-331 (348)
95 1rgw_A ZAsp protein; PDZ, cyph 98.6 3.8E-08 1.3E-12 84.7 7.0 58 675-735 26-85 (85)
96 2awx_A Synapse associated prot 98.6 7.4E-08 2.5E-12 86.6 9.1 67 674-743 33-102 (105)
97 1x5q_A LAP4 protein; PDZ domai 98.6 4.2E-08 1.4E-12 88.9 7.5 60 674-736 46-107 (110)
98 1wf7_A Enigma homologue protei 98.6 1.3E-08 4.4E-13 91.3 3.9 67 675-744 30-98 (103)
99 2q3g_A PDZ and LIM domain prot 98.6 5.4E-08 1.9E-12 84.6 7.6 58 675-735 28-87 (89)
100 1v5q_A GRIP1 homolog, glutamat 98.6 3.1E-08 1.1E-12 91.7 6.3 61 675-736 46-109 (122)
101 2vsv_A Rhophilin-2; scaffold p 98.6 7.2E-08 2.5E-12 87.8 8.5 55 675-730 45-101 (109)
102 2f5y_A Regulator of G-protein 98.6 1.3E-07 4.4E-12 82.7 9.7 58 675-735 25-84 (91)
103 1w9e_A Syntenin 1; cell adhesi 98.6 7.5E-08 2.6E-12 93.8 9.0 68 675-744 28-97 (166)
104 2rcz_A Tight junction protein 98.6 1E-07 3.4E-12 80.9 8.6 57 675-734 22-81 (81)
105 1vb7_A PDZ and LIM domain 2; P 98.6 2.6E-08 8.8E-13 87.8 5.0 59 675-736 31-91 (94)
106 3r68_A Na(+)/H(+) exchange reg 98.6 6.2E-08 2.1E-12 85.2 7.4 59 675-735 30-90 (95)
107 3bpu_A Membrane-associated gua 98.6 6.8E-08 2.3E-12 83.8 7.5 59 674-735 27-87 (88)
108 4amh_A Disks large homolog 1; 98.6 2E-07 7E-12 84.0 10.8 59 674-735 32-93 (106)
109 1d5g_A Human phosphatase HPTP1 98.6 1E-07 3.5E-12 84.0 8.6 59 674-735 33-94 (96)
110 2opg_A Multiple PDZ domain pro 98.6 1.1E-07 3.8E-12 84.1 8.9 61 674-737 30-93 (98)
111 2iwq_A Multiple PDZ domain pro 98.6 1.2E-07 4.2E-12 88.0 9.5 58 674-734 59-119 (123)
112 3fan_A Non-structural protein; 98.6 9.1E-08 3.1E-12 95.0 8.9 115 313-478 27-147 (213)
113 2q9v_A Membrane-associated gua 98.6 7.7E-08 2.6E-12 83.8 7.6 58 675-733 28-88 (90)
114 1uit_A Human discs large 5 pro 98.6 2.8E-08 9.7E-13 91.1 4.9 64 674-738 42-105 (117)
115 2o2t_A Multiple PDZ domain pro 98.6 2E-08 6.8E-13 92.1 3.9 61 674-737 49-113 (117)
116 1ueq_A Membrane associated gua 98.6 1.4E-07 4.6E-12 87.5 9.5 60 674-734 44-106 (123)
117 2fne_A Multiple PDZ domain pro 98.6 1.2E-07 3.9E-12 87.4 8.9 59 675-736 54-115 (117)
118 1g9o_A NHE-RF; PDZ domain, com 98.6 1.4E-07 4.7E-12 82.3 8.9 60 674-735 27-88 (91)
119 3cbz_A Dishevelled-2; PDZ doma 98.6 1.3E-07 4.4E-12 85.7 8.8 62 674-736 33-98 (108)
120 2yub_A LIMK-2, LIM domain kina 98.6 2.3E-08 8E-13 92.3 3.9 62 674-738 44-109 (118)
121 1kwa_A Hcask/LIN-2 protein; PD 98.6 1.2E-07 4.1E-12 82.6 8.3 58 675-735 26-86 (88)
122 1uez_A KIAA1526 protein; PDZ d 98.6 4.3E-08 1.5E-12 87.4 5.5 60 674-735 35-94 (101)
123 3cyy_A Tight junction protein 98.6 1.1E-07 3.9E-12 82.9 8.1 65 566-636 23-91 (92)
124 1wi2_A Riken cDNA 2700099C19; 98.6 9.3E-08 3.2E-12 85.8 7.7 58 674-735 41-100 (104)
125 2d90_A PDZ domain containing p 98.6 2.6E-08 8.8E-13 89.1 3.9 62 674-737 30-93 (102)
126 2jre_A C60-1 PDZ domain peptid 98.6 9.9E-08 3.4E-12 86.1 7.8 60 674-736 44-106 (108)
127 2i1n_A Discs, large homolog 3; 98.6 1.5E-07 5.2E-12 83.9 8.9 60 674-736 34-96 (102)
128 2ejy_A 55 kDa erythrocyte memb 98.6 1.2E-07 4.1E-12 84.4 8.1 53 675-729 37-92 (97)
129 1n7e_A AMPA receptor interacti 98.6 2E-07 6.7E-12 82.5 9.1 60 674-736 30-92 (97)
130 1v5l_A PDZ and LIM domain 3; a 98.6 3.4E-08 1.2E-12 88.6 4.2 59 675-736 30-90 (103)
131 1b8q_A Protein (neuronal nitri 98.6 3.8E-08 1.3E-12 91.6 4.7 67 675-743 34-103 (127)
132 2kjd_A Sodium/hydrogen exchang 98.6 7E-09 2.4E-13 96.6 -0.4 70 674-745 33-106 (128)
133 1uep_A Membrane associated gua 98.6 5.7E-08 2E-12 87.1 5.6 61 674-735 34-97 (103)
134 2fe5_A Presynaptic protein SAP 98.6 2.2E-07 7.5E-12 81.5 9.2 58 674-734 33-93 (94)
135 2vwr_A Ligand of NUMB protein 98.5 2E-07 6.9E-12 82.0 9.0 59 674-735 29-90 (95)
136 1m5z_A GRIP, AMPA receptor int 98.5 1.6E-07 5.5E-12 81.9 8.2 57 674-733 32-90 (91)
137 1q3o_A Shank1; PDZ, GKAP, pept 98.5 1.9E-07 6.4E-12 84.5 8.8 55 675-731 46-102 (109)
138 2eeg_A PDZ and LIM domain prot 98.5 9.7E-08 3.3E-12 84.0 6.5 58 675-735 33-92 (94)
139 3ngh_A PDZ domain-containing p 98.5 7.6E-08 2.6E-12 86.5 5.9 59 674-735 26-86 (106)
140 1um1_A KIAA1849 protein, RSGI 98.5 3.9E-08 1.3E-12 89.2 4.0 68 674-744 36-106 (110)
141 2h2b_A Tight junction protein 98.5 1.3E-07 4.4E-12 85.2 7.4 62 673-736 38-99 (107)
142 4fgm_A Aminopeptidase N family 98.5 2.6E-07 9E-12 107.7 11.9 88 674-763 496-585 (597)
143 1wfg_A Regulating synaptic mem 98.5 1.7E-07 5.8E-12 88.0 8.5 110 617-734 13-127 (131)
144 2byg_A Channel associated prot 98.5 1.6E-07 5.5E-12 86.4 8.1 59 674-735 54-115 (117)
145 3e17_A Tight junction protein 98.5 1.7E-07 5.9E-12 81.6 7.7 53 675-729 22-77 (88)
146 2g5m_B Neurabin-2; spinophilin 98.5 4.4E-08 1.5E-12 89.2 4.0 66 674-742 35-103 (113)
147 2jik_A Synaptojanin-2 binding 98.5 1.9E-07 6.5E-12 83.1 8.0 59 674-735 37-98 (101)
148 2pkt_A PDZ and LIM domain prot 98.5 1.3E-07 4.6E-12 82.5 6.9 60 566-631 27-89 (91)
149 2djt_A Unnamed protein product 98.5 2.1E-07 7E-12 83.4 8.3 58 675-735 39-99 (104)
150 2eaq_A LIM domain only protein 98.5 1.4E-07 4.9E-12 82.0 7.0 60 566-629 28-90 (90)
151 2yt7_A Amyloid beta A4 precurs 98.5 1.8E-07 6E-12 83.6 7.7 55 675-729 38-95 (101)
152 1wif_A RSGI RUH-020, riken cDN 98.5 7.6E-08 2.6E-12 89.9 5.4 58 675-733 50-110 (126)
153 1x5n_A Harmonin; PDZ domain, u 98.5 3.7E-08 1.3E-12 89.9 3.2 65 674-742 41-108 (114)
154 2ego_A General receptor for ph 98.5 3.1E-07 1.1E-11 81.1 9.1 53 675-729 38-92 (96)
155 1wi4_A Synip, syntaxin binding 98.5 2.2E-07 7.6E-12 84.3 8.2 60 675-735 42-106 (109)
156 2dmz_A INAD-like protein; PDZ 98.5 1.9E-07 6.6E-12 87.1 8.0 60 674-736 46-108 (129)
157 2kpk_A Membrane-associated gua 98.5 2.8E-07 9.7E-12 86.1 9.1 59 675-734 44-105 (129)
158 1va8_A Maguk P55 subfamily mem 98.5 2.1E-07 7E-12 85.0 7.9 59 675-736 49-110 (113)
159 2rcz_A Tight junction protein 98.5 2.3E-07 7.9E-12 78.6 7.7 76 534-628 2-81 (81)
160 2edz_A PDZ domain-containing p 98.5 8.1E-08 2.8E-12 87.7 5.1 64 674-740 38-103 (114)
161 1ky9_A Protease DO, DEGP, HTRA 98.5 2.8E-08 9.7E-13 112.1 2.3 93 650-744 263-355 (448)
162 2vz5_A TAX1-binding protein 3; 98.5 2.9E-07 1E-11 87.3 9.0 70 565-639 63-135 (139)
163 1q7x_A PDZ2B domain of PTP-BAS 98.5 1.6E-07 5.5E-12 84.8 6.8 60 674-736 42-104 (108)
164 2la8_A Inactivation-NO-after-p 98.5 5.4E-08 1.8E-12 88.0 3.6 55 675-732 26-83 (106)
165 3qe1_A Sorting nexin-27, G pro 98.5 3.9E-07 1.3E-11 82.0 9.2 57 675-734 44-102 (107)
166 2iwo_A Multiple PDZ domain pro 98.5 1.2E-07 4.2E-12 87.6 6.0 60 675-737 54-116 (120)
167 2qg1_A Multiple PDZ domain pro 98.5 3.4E-07 1.2E-11 80.0 8.6 58 674-734 29-89 (92)
168 2hga_A Conserved protein MTH13 98.5 4.5E-07 1.6E-11 84.5 9.6 66 566-639 25-90 (125)
169 3rle_A Golgi reassembly-stacki 98.5 1.8E-07 6E-12 94.9 7.2 70 674-744 16-88 (209)
170 1whd_A RGS3, regulator of G-pr 98.5 1.6E-07 5.4E-12 83.7 6.1 58 675-735 37-96 (100)
171 1x6d_A Interleukin-16; PDZ dom 98.5 1.2E-07 4.1E-12 87.2 5.4 62 674-737 42-106 (119)
172 2e7k_A Maguk P55 subfamily mem 98.5 3.1E-07 1E-11 80.5 7.7 53 675-729 30-84 (91)
173 1wha_A KIAA0147 protein, scrib 98.5 2.6E-07 8.9E-12 83.0 7.4 58 674-734 38-98 (105)
174 3axa_A Afadin, nectin-3, prote 98.5 4.6E-07 1.6E-11 81.5 8.9 59 674-735 38-99 (106)
175 2w4f_A Protein LAP4; structura 98.5 3.9E-07 1.3E-11 80.3 8.3 62 565-630 33-95 (97)
176 2r4h_A Membrane-associated gua 98.5 4.6E-07 1.6E-11 82.5 8.9 60 674-736 49-111 (112)
177 2kv8_A RGS12, regulator of G-p 98.4 9.8E-08 3.3E-12 81.9 4.1 56 675-733 24-81 (83)
178 1v62_A KIAA1719 protein; struc 98.4 2.4E-07 8.3E-12 85.1 7.0 58 675-735 43-103 (117)
179 1nf3_C PAR-6B; semi-CRIB motif 98.4 3.9E-07 1.3E-11 85.0 8.6 58 675-735 66-126 (128)
180 1y7n_A Amyloid beta A4 precurs 98.4 4.8E-07 1.6E-11 79.3 8.5 51 677-729 34-86 (90)
181 1ujd_A KIAA0559 protein; PDZ d 98.4 3.2E-07 1.1E-11 84.2 7.8 59 675-736 50-111 (117)
182 1uew_A Membrane associated gua 98.4 2.4E-07 8.3E-12 84.5 6.8 59 675-736 44-105 (114)
183 3o46_A Maguk P55 subfamily mem 98.4 6.4E-07 2.2E-11 78.5 9.1 53 675-729 29-84 (93)
184 2iwn_A Multiple PDZ domain pro 98.4 5E-07 1.7E-11 79.4 8.1 59 674-735 33-94 (97)
185 3hpk_A Protein interacting wit 98.4 1.5E-07 5.2E-12 87.3 5.0 66 675-742 46-114 (125)
186 1uit_A Human discs large 5 pro 98.4 1.6E-07 5.5E-12 86.1 5.0 64 566-633 42-106 (117)
187 2dm8_A INAD-like protein; PDZ 98.4 2.5E-07 8.7E-12 84.5 6.2 60 674-736 43-105 (116)
188 4fln_A Protease DO-like 2, chl 98.4 5E-07 1.7E-11 103.6 10.0 93 650-745 253-356 (539)
189 2z17_A Pleckstrin homology SEC 98.4 2.8E-07 9.5E-12 82.7 6.2 53 674-728 48-102 (104)
190 2dkr_A LIN-7 homolog B; LIN-7B 98.4 6E-07 2E-11 78.5 8.2 58 674-734 30-90 (93)
191 2dlu_A INAD-like protein; PDZ 98.4 5.2E-07 1.8E-11 81.8 7.8 58 675-735 39-99 (111)
192 1qau_A Neuronal nitric oxide s 98.4 7.6E-07 2.6E-11 80.7 8.9 70 566-640 26-99 (112)
193 2db5_A INAD-like protein; PDZ 98.4 5E-07 1.7E-11 84.1 7.8 58 674-734 54-115 (128)
194 3b76_A E3 ubiquitin-protein li 98.4 7E-07 2.4E-11 82.3 8.6 55 674-730 53-110 (118)
195 3num_A Serine protease HTRA1; 98.4 3.8E-08 1.3E-12 106.7 0.0 68 674-745 254-321 (332)
196 1x5q_A LAP4 protein; PDZ domai 98.4 5.7E-07 2E-11 81.4 7.8 63 565-631 45-108 (110)
197 1wg6_A Hypothetical protein (r 98.4 2.1E-07 7E-12 86.9 5.0 60 675-735 56-123 (127)
198 3i4w_A Disks large homolog 4; 98.4 6.6E-07 2.2E-11 79.9 8.1 57 675-734 36-95 (104)
199 1p1d_A PDZ45, glutamate recept 98.4 7.2E-07 2.5E-11 89.1 9.3 61 674-735 36-99 (196)
200 2edp_A Fragment, shroom family 98.4 3.3E-07 1.1E-11 81.7 6.1 58 675-735 36-95 (100)
201 2yuy_A RHO GTPase activating p 98.4 1.5E-07 5.1E-12 87.6 3.8 59 674-735 61-121 (126)
202 3l4f_D SH3 and multiple ankyri 98.4 7E-07 2.4E-11 83.9 8.4 54 675-730 66-121 (132)
203 1wf8_A Neurabin-I; PDZ domain, 98.4 8E-07 2.7E-11 80.0 8.4 58 674-734 40-100 (107)
204 2pa1_A PDZ and LIM domain prot 98.4 9.5E-07 3.2E-11 76.3 8.5 58 566-629 26-86 (87)
205 1mfg_A ERB-B2 interacting prot 98.4 9.4E-07 3.2E-11 77.7 8.6 56 674-733 35-92 (95)
206 2eno_A Synaptojanin-2-binding 98.4 7.9E-07 2.7E-11 81.8 8.4 60 673-735 46-108 (120)
207 4e34_A Golgi-associated PDZ an 98.4 1.1E-06 3.9E-11 75.7 8.8 53 675-729 29-84 (87)
208 1vae_A Rhophilin 2, rhophilin, 98.4 2.9E-07 1E-11 83.9 5.2 55 675-730 37-93 (111)
209 2fcf_A Multiple PDZ domain pro 98.4 8.8E-07 3E-11 79.0 8.3 80 531-629 17-100 (103)
210 2d92_A INAD-like protein; PDZ 98.4 8.3E-07 2.8E-11 80.2 8.2 57 674-732 44-103 (108)
211 1wfv_A Membrane associated gua 98.4 3.4E-07 1.2E-11 81.7 5.5 58 675-735 37-97 (103)
212 3kzd_A TIAM-1, T-lymphoma inva 98.4 1E-06 3.6E-11 77.9 8.5 51 674-728 35-87 (94)
213 3k1r_A Harmonin; protein-prote 98.4 7.5E-07 2.6E-11 89.0 8.5 57 675-735 111-169 (192)
214 2qkv_A Inactivation-NO-after-p 98.4 5.9E-07 2E-11 79.4 6.9 55 675-732 32-89 (96)
215 1ujv_A Membrane associated gua 98.3 7.6E-07 2.6E-11 78.8 7.5 58 675-735 33-92 (96)
216 1qav_A Alpha-1 syntrophin (res 98.3 1.2E-06 4.2E-11 76.1 8.7 53 675-729 31-86 (90)
217 3nfk_A Tyrosine-protein phosph 98.3 7.3E-07 2.5E-11 80.2 7.4 58 675-733 44-107 (107)
218 3gsl_A Disks large homolog 4; 98.3 1.3E-06 4.5E-11 86.4 10.0 60 674-734 35-95 (196)
219 2jil_A GRIP1 protein, glutamat 98.3 8.4E-07 2.9E-11 78.3 7.6 61 565-631 31-95 (97)
220 2daz_A INAD-like protein; PDZ 98.3 9.5E-07 3.2E-11 81.8 8.3 60 674-736 51-113 (124)
221 2gzv_A PRKCA-binding protein; 98.3 1.3E-06 4.4E-11 79.9 9.1 53 675-729 51-106 (114)
222 1uhp_A Hypothetical protein KI 98.3 1.5E-06 5E-11 78.3 9.2 58 674-734 41-101 (107)
223 2v90_A PDZ domain-containing p 98.3 4.4E-07 1.5E-11 80.0 5.6 60 566-631 30-92 (96)
224 1tp5_A Presynaptic density pro 98.3 8.2E-07 2.8E-11 81.5 7.2 59 675-734 39-98 (119)
225 1ihj_A INAD; intermolecular di 98.3 1.7E-06 5.9E-11 76.4 8.8 59 565-629 36-98 (98)
226 1r6j_A Syntenin 1; PDZ, membra 98.3 1.7E-06 5.7E-11 74.6 8.3 51 677-729 26-78 (82)
227 2eeh_A PDZ domain-containing p 98.3 9.6E-07 3.3E-11 78.5 7.1 60 566-630 36-96 (100)
228 2qbw_A PDZ-fibronectin fusion 98.3 2.5E-06 8.6E-11 84.8 10.8 67 674-744 24-95 (195)
229 1fc6_A Photosystem II D1 prote 98.3 2.9E-06 1E-10 93.9 12.4 78 674-753 99-181 (388)
230 2qt5_A Glutamate receptor-inte 98.3 2.5E-06 8.7E-11 85.3 10.7 57 675-734 34-93 (200)
231 1v6b_A Harmonin isoform A1; st 98.3 3.6E-07 1.2E-11 84.1 4.0 57 675-732 44-105 (118)
232 2uzc_A Human pdlim5, PDZ and L 98.3 2E-06 6.9E-11 74.3 8.6 58 566-629 27-87 (88)
233 1uju_A Scribble; PDZ domain, c 98.3 3.6E-07 1.2E-11 82.9 3.9 58 674-734 44-104 (111)
234 2jxo_A Ezrin-radixin-moesin-bi 98.3 7.3E-07 2.5E-11 78.9 5.7 59 566-629 33-94 (98)
235 1uf1_A KIAA1526 protein; PDZ d 98.3 5.1E-07 1.8E-11 84.1 4.9 68 567-639 47-115 (128)
236 2ehr_A INAD-like protein; PDZ 98.3 6.5E-07 2.2E-11 82.0 5.4 55 674-730 50-107 (117)
237 2h2b_A Tight junction protein 98.3 1.7E-06 5.8E-11 77.8 8.1 61 566-630 39-99 (107)
238 3r0h_A INAD, inactivation-NO-a 98.3 1.9E-06 6.6E-11 86.3 9.3 60 675-736 46-110 (206)
239 2eei_A PDZ domain-containing p 98.3 8.2E-07 2.8E-11 79.7 5.8 58 674-734 32-91 (106)
240 2dc2_A GOPC, golgi associated 98.3 2.6E-06 8.7E-11 76.3 8.8 54 675-730 36-92 (103)
241 1vb7_A PDZ and LIM domain 2; P 98.3 5.9E-07 2E-11 79.0 4.5 59 566-630 30-91 (94)
242 1wf7_A Enigma homologue protei 98.2 4E-07 1.4E-11 81.5 3.3 66 566-637 29-97 (103)
243 1wh1_A KIAA1095 protein; PDZ d 98.2 4.6E-07 1.6E-11 84.0 3.8 65 566-635 48-114 (124)
244 1kwa_A Hcask/LIN-2 protein; PD 98.2 2.2E-06 7.4E-11 74.6 7.9 58 566-629 25-86 (88)
245 3khf_A Microtubule-associated 98.2 2.8E-06 9.7E-11 75.2 8.6 58 567-630 35-95 (99)
246 3tsv_A Tight junction protein 98.2 1.7E-06 5.7E-11 80.4 7.4 61 566-630 51-114 (124)
247 1i16_A Interleukin 16, LCF; cy 98.2 8.6E-07 2.9E-11 83.0 5.4 59 674-734 57-118 (130)
248 3egg_C Spinophilin; PP1, serin 98.2 2.8E-06 9.5E-11 83.4 9.3 57 674-733 111-170 (170)
249 2iwq_A Multiple PDZ domain pro 98.2 2.6E-06 9E-11 79.0 8.5 58 566-629 59-120 (123)
250 2dls_A PDZ-rhogef, RHO guanine 98.2 1.7E-06 5.8E-11 75.9 6.9 58 567-629 30-88 (93)
251 3sfj_A TAX1-binding protein 3; 98.2 2.5E-06 8.7E-11 76.1 8.0 58 565-627 44-104 (104)
252 1rgw_A ZAsp protein; PDZ, cyph 98.2 1.7E-06 5.7E-11 74.3 6.6 57 567-629 26-85 (85)
253 2vsp_A PDZ domain-containing p 98.2 9.8E-07 3.4E-11 77.0 5.2 59 566-630 27-88 (91)
254 2awx_A Synapse associated prot 98.2 2.8E-06 9.6E-11 76.1 8.3 66 566-637 33-102 (105)
255 2krg_A Na(+)/H(+) exchange reg 98.2 1.5E-07 5.3E-12 95.9 -0.1 72 675-749 34-110 (216)
256 1n7t_A 99-MER peptide of densi 98.2 1.4E-06 4.9E-11 77.8 6.3 56 674-733 43-100 (103)
257 3shw_A Tight junction protein 98.2 2.2E-06 7.4E-11 96.8 9.2 76 675-751 24-111 (468)
258 3tsz_A Tight junction protein 98.2 2.3E-06 7.8E-11 94.8 9.2 76 675-751 32-119 (391)
259 2q3g_A PDZ and LIM domain prot 98.2 2.8E-06 9.4E-11 73.7 7.8 59 566-630 27-88 (89)
260 2cs5_A Tyrosine-protein phosph 98.2 5.7E-07 1.9E-11 82.6 3.5 60 675-735 42-107 (119)
261 1uez_A KIAA1526 protein; PDZ d 98.2 1.4E-06 4.8E-11 77.5 5.9 60 566-630 35-95 (101)
262 2edv_A FERM and PDZ domain-con 98.2 9.7E-07 3.3E-11 78.0 4.8 56 675-734 32-89 (96)
263 2d8i_A T-cell lymphoma invasio 98.2 1.4E-06 4.9E-11 79.8 6.0 53 675-732 45-99 (114)
264 1ufx_A KIAA1526 protein; PDZ d 98.2 1.7E-06 5.7E-11 77.7 6.2 59 675-734 33-97 (103)
265 1m5z_A GRIP, AMPA receptor int 98.2 3.8E-06 1.3E-10 73.1 8.2 58 566-627 32-90 (91)
266 2he4_A Na(+)/H(+) exchange reg 98.2 3.6E-06 1.2E-10 73.1 7.9 58 566-629 28-88 (90)
267 3bpu_A Membrane-associated gua 98.2 2.7E-06 9.2E-11 73.6 7.1 59 566-629 27-87 (88)
268 2csj_A TJP2 protein; PDZ domai 98.2 8.2E-07 2.8E-11 81.4 3.8 58 674-735 46-105 (117)
269 4amh_A Disks large homolog 1; 98.2 5E-06 1.7E-10 74.8 8.8 66 566-637 32-102 (106)
270 2eeg_A PDZ and LIM domain prot 98.2 2.1E-06 7.2E-11 75.4 6.0 58 566-629 32-92 (94)
271 2kom_A Partitioning defective 98.2 5.4E-06 1.8E-10 76.5 9.0 60 566-629 58-121 (121)
272 2koj_A Partitioning defective 98.2 5.4E-06 1.8E-10 75.0 8.7 61 566-630 39-103 (111)
273 1nf3_C PAR-6B; semi-CRIB motif 98.1 2.2E-06 7.4E-11 79.9 6.2 58 566-629 65-126 (128)
274 2fne_A Multiple PDZ domain pro 98.1 6.5E-06 2.2E-10 75.6 9.1 60 565-630 52-115 (117)
275 2yub_A LIMK-2, LIM domain kina 98.1 1.3E-06 4.4E-11 80.5 4.3 62 565-632 43-109 (118)
276 1b8q_A Protein (neuronal nitri 98.1 1.5E-06 5.1E-11 80.8 4.7 69 566-639 33-105 (127)
277 3soe_A Membrane-associated gua 98.1 5.5E-06 1.9E-10 75.7 8.4 59 675-736 35-95 (113)
278 1um7_A Synapse-associated prot 98.1 1.6E-06 5.5E-11 78.5 4.8 58 674-734 39-99 (113)
279 2opg_A Multiple PDZ domain pro 98.1 4.8E-06 1.6E-10 73.5 7.7 61 566-632 30-94 (98)
280 2o2t_A Multiple PDZ domain pro 98.1 1.3E-06 4.4E-11 79.9 4.1 61 565-631 48-113 (117)
281 2vwr_A Ligand of NUMB protein 98.1 4.7E-06 1.6E-10 73.2 7.5 60 566-629 29-90 (95)
282 2f5y_A Regulator of G-protein 98.1 5.9E-06 2E-10 72.0 8.1 58 568-631 26-86 (91)
283 2i04_A Membrane-associated gua 98.1 7.2E-06 2.5E-10 70.3 8.5 57 566-626 25-85 (85)
284 2fe5_A Presynaptic protein SAP 98.1 7.2E-06 2.4E-10 71.7 8.3 58 566-629 33-94 (94)
285 3gge_A PDZ domain-containing p 98.1 1E-05 3.5E-10 71.5 9.1 57 675-731 29-88 (95)
286 1um1_A KIAA1849 protein, RSGI 98.1 1.2E-06 4.3E-11 79.1 3.4 66 565-636 35-104 (110)
287 2jre_A C60-1 PDZ domain peptid 98.1 3.9E-06 1.3E-10 75.5 6.6 59 566-630 44-106 (108)
288 2iwo_A Multiple PDZ domain pro 98.1 2.2E-06 7.6E-11 79.1 5.0 62 565-632 52-117 (120)
289 1v5q_A GRIP1 homolog, glutamat 98.1 5.8E-06 2E-10 76.3 7.8 60 567-630 46-109 (122)
290 3cbz_A Dishevelled-2; PDZ doma 98.1 7.4E-06 2.5E-10 74.0 8.3 63 565-630 32-98 (108)
291 1v5l_A PDZ and LIM domain 3; a 98.1 1.8E-06 6.3E-11 77.1 4.2 59 566-630 29-90 (103)
292 2qbw_A PDZ-fibronectin fusion 98.1 8.1E-06 2.8E-10 81.1 9.3 72 565-640 23-97 (195)
293 2vsv_A Rhophilin-2; scaffold p 98.1 6.7E-06 2.3E-10 74.7 7.8 57 568-629 46-105 (109)
294 4fgm_A Aminopeptidase N family 98.1 7.9E-06 2.7E-10 95.2 10.4 71 566-641 496-567 (597)
295 1zyo_A Serine protease; beta-b 98.1 3.4E-05 1.2E-09 76.9 13.5 154 315-504 26-185 (191)
296 2yt7_A Amyloid beta A4 precurs 98.1 5.2E-06 1.8E-10 74.0 6.8 57 567-627 38-98 (101)
297 3ngh_A PDZ domain-containing p 98.1 3E-06 1E-10 75.9 5.2 58 567-630 27-87 (106)
298 1va8_A Maguk P55 subfamily mem 98.1 7.6E-06 2.6E-10 74.5 7.9 59 566-630 48-110 (113)
299 3axa_A Afadin, nectin-3, prote 98.1 1.2E-05 4E-10 72.2 8.9 61 564-630 36-100 (106)
300 2g5m_B Neurabin-2; spinophilin 98.1 2.1E-06 7.1E-11 78.0 4.0 65 565-635 34-102 (113)
301 1g9o_A NHE-RF; PDZ domain, com 98.0 7.9E-06 2.7E-10 71.0 7.4 59 566-629 27-88 (91)
302 2ego_A General receptor for ph 98.0 1.3E-05 4.4E-10 70.6 8.8 56 566-627 37-95 (96)
303 2jik_A Synaptojanin-2 binding 98.0 1.2E-05 4.1E-10 71.3 8.7 59 565-629 36-98 (101)
304 1n7e_A AMPA receptor interacti 98.0 1E-05 3.5E-10 71.3 8.1 59 566-630 30-92 (97)
305 3r68_A Na(+)/H(+) exchange reg 98.0 7E-06 2.4E-10 71.9 7.0 59 566-630 29-90 (95)
306 1mfg_A ERB-B2 interacting prot 98.0 9.1E-06 3.1E-10 71.3 7.7 58 565-628 34-93 (95)
307 1d5g_A Human phosphatase HPTP1 98.0 1.2E-05 4.1E-10 70.6 8.4 58 566-629 33-94 (96)
308 2i1n_A Discs, large homolog 3; 98.0 1.4E-05 4.9E-10 71.0 8.9 61 565-631 33-97 (102)
309 3qe1_A Sorting nexin-27, G pro 98.0 1.2E-05 4.1E-10 72.1 8.4 58 567-630 44-104 (107)
310 1wi2_A Riken cDNA 2700099C19; 98.0 7.6E-06 2.6E-10 73.2 7.0 57 566-629 41-100 (104)
311 2r4h_A Membrane-associated gua 98.0 1.1E-05 3.6E-10 73.4 7.8 59 566-630 49-111 (112)
312 1ueq_A Membrane associated gua 98.0 1.2E-05 4.2E-10 74.2 8.2 59 566-628 44-106 (123)
313 2q9v_A Membrane-associated gua 98.0 8.6E-06 2.9E-10 70.6 6.8 58 567-628 28-89 (90)
314 3kzd_A TIAM-1, T-lymphoma inva 98.0 1.4E-05 4.8E-10 70.6 8.1 52 566-625 35-89 (94)
315 2djt_A Unnamed protein product 98.0 9.8E-06 3.4E-10 72.3 7.2 59 566-630 38-100 (104)
316 1wfg_A Regulating synaptic mem 98.0 1.7E-05 5.8E-10 74.2 9.1 60 566-629 65-128 (131)
317 1uep_A Membrane associated gua 98.0 5.4E-06 1.8E-10 74.1 5.4 60 566-629 34-97 (103)
318 2byg_A Channel associated prot 98.0 1.4E-05 4.7E-10 73.3 8.2 58 566-629 54-115 (117)
319 2kjd_A Sodium/hydrogen exchang 98.0 6.9E-06 2.4E-10 76.2 6.2 62 566-632 33-97 (128)
320 2dmz_A INAD-like protein; PDZ 98.0 1.1E-05 3.7E-10 75.1 7.4 62 565-632 45-110 (129)
321 3qik_A Phosphatidylinositol 3, 98.0 1E-05 3.5E-10 72.2 6.8 56 567-625 40-98 (101)
322 2ejy_A 55 kDa erythrocyte memb 98.0 1.2E-05 4E-10 71.5 7.1 56 566-627 36-95 (97)
323 2qkv_A Inactivation-NO-after-p 98.0 1.6E-05 5.5E-10 70.1 7.9 58 566-627 31-90 (96)
324 2edz_A PDZ domain-containing p 98.0 4.4E-06 1.5E-10 76.1 4.3 64 566-635 38-104 (114)
325 3i4w_A Disks large homolog 4; 98.0 1.2E-05 4.1E-10 71.6 6.9 60 566-629 35-96 (104)
326 1q3o_A Shank1; PDZ, GKAP, pept 98.0 2.3E-05 7.9E-10 70.6 8.8 57 566-628 45-104 (109)
327 1wf8_A Neurabin-I; PDZ domain, 97.9 1.6E-05 5.6E-10 71.4 7.7 60 564-629 38-101 (107)
328 2kpk_A Membrane-associated gua 97.9 2.2E-05 7.4E-10 73.2 8.8 59 566-628 43-105 (129)
329 3o46_A Maguk P55 subfamily mem 97.9 2.2E-05 7.4E-10 68.6 8.2 58 566-629 28-89 (93)
330 1uew_A Membrane associated gua 97.9 8.2E-06 2.8E-10 74.3 5.6 57 568-630 45-105 (114)
331 1y7n_A Amyloid beta A4 precurs 97.9 2.2E-05 7.5E-10 68.6 8.1 53 569-627 34-89 (90)
332 1q7x_A PDZ2B domain of PTP-BAS 97.9 1.8E-05 6.1E-10 71.2 7.8 60 565-630 41-104 (108)
333 2d90_A PDZ domain containing p 97.9 8.8E-06 3E-10 72.4 5.7 59 566-630 30-91 (102)
334 1v62_A KIAA1719 protein; struc 97.9 1.3E-05 4.5E-10 73.4 6.9 59 566-630 42-104 (117)
335 2iwn_A Multiple PDZ domain pro 97.9 1.7E-05 5.7E-10 69.5 7.3 58 566-629 33-94 (97)
336 2kv8_A RGS12, regulator of G-p 97.9 5.2E-06 1.8E-10 71.0 3.9 56 567-628 24-82 (83)
337 1ujd_A KIAA0559 protein; PDZ d 97.9 1.7E-05 5.9E-10 72.5 7.6 59 566-630 49-111 (117)
338 1x5n_A Harmonin; PDZ domain, u 97.9 2.7E-06 9.1E-11 77.4 2.1 61 566-633 41-105 (114)
339 2e7k_A Maguk P55 subfamily mem 97.9 1.6E-05 5.6E-10 69.4 7.1 57 566-628 29-88 (91)
340 1whd_A RGS3, regulator of G-pr 97.9 9.8E-06 3.4E-10 72.0 5.7 57 567-629 37-96 (100)
341 2lob_A Golgi-associated PDZ an 97.2 1.3E-06 4.5E-11 79.6 0.0 52 675-728 54-108 (112)
342 2qg1_A Multiple PDZ domain pro 97.9 1.7E-05 5.8E-10 69.0 7.1 58 566-629 29-90 (92)
343 1vae_A Rhophilin 2, rhophilin, 97.9 9.5E-06 3.2E-10 73.8 5.5 54 568-626 38-94 (111)
344 1tp5_A Presynaptic density pro 97.9 1.5E-05 5.1E-10 73.0 6.9 60 566-629 38-99 (119)
345 3mmg_A Nuclear inclusion prote 97.9 0.00035 1.2E-08 71.2 17.4 174 291-507 14-193 (241)
346 3suz_A Amyloid beta A4 precurs 97.9 4.2E-06 1.4E-10 92.7 3.4 67 675-742 233-302 (388)
347 1x6d_A Interleukin-16; PDZ dom 97.9 6.2E-06 2.1E-10 75.6 4.0 62 566-632 42-107 (119)
348 2d8i_A T-cell lymphoma invasio 97.9 1.3E-05 4.3E-10 73.4 5.9 55 566-628 44-101 (114)
349 1wif_A RSGI RUH-020, riken cDN 97.9 7.8E-06 2.7E-10 76.2 4.5 58 566-627 49-110 (126)
350 2la8_A Inactivation-NO-after-p 97.9 1.6E-05 5.6E-10 71.6 6.4 59 566-628 25-85 (106)
351 1qav_A Alpha-1 syntrophin (res 97.9 3E-05 1E-09 67.2 7.9 55 566-626 30-88 (90)
352 2edp_A Fragment, shroom family 97.9 1.1E-05 3.7E-10 71.7 5.1 58 566-629 35-95 (100)
353 2dm8_A INAD-like protein; PDZ 97.9 1.7E-05 6E-10 72.1 6.3 59 566-630 43-105 (116)
354 2dkr_A LIN-7 homolog B; LIN-7B 97.8 3.1E-05 1.1E-09 67.4 7.4 58 566-629 30-91 (93)
355 2csj_A TJP2 protein; PDZ domai 97.8 1.7E-05 6E-10 72.4 6.1 58 566-629 46-105 (117)
356 1ujv_A Membrane associated gua 97.8 3.7E-05 1.3E-09 67.8 7.9 58 567-630 33-93 (96)
357 1wfv_A Membrane associated gua 97.8 1.5E-05 5.1E-10 70.8 5.4 59 566-630 36-98 (103)
358 1n7t_A 99-MER peptide of densi 97.8 1.4E-05 4.9E-10 71.1 4.9 58 565-628 42-101 (103)
359 2eno_A Synaptojanin-2-binding 97.8 2.9E-05 1E-09 71.2 7.1 60 565-630 46-109 (120)
360 1z87_A Alpha-1-syntrophin; pro 97.8 1.9E-05 6.6E-10 82.6 6.6 58 675-735 104-164 (263)
361 3b76_A E3 ubiquitin-protein li 97.8 4.6E-05 1.6E-09 70.0 8.4 57 565-627 52-112 (118)
362 2d92_A INAD-like protein; PDZ 97.8 3.4E-05 1.2E-09 69.5 7.4 58 565-627 43-104 (108)
363 2daz_A INAD-like protein; PDZ 97.8 2.2E-05 7.6E-10 72.5 6.2 59 566-630 51-113 (124)
364 3e17_A Tight junction protein 97.8 4.8E-05 1.7E-09 65.9 8.0 56 566-627 21-80 (88)
365 3k50_A Putative S41 protease; 97.8 1.1E-05 3.8E-10 89.6 4.7 58 675-736 91-148 (403)
366 2db5_A INAD-like protein; PDZ 97.8 3.4E-05 1.2E-09 71.6 7.3 58 566-629 54-116 (128)
367 2yuy_A RHO GTPase activating p 97.8 7.4E-06 2.5E-10 76.0 2.7 58 566-629 61-121 (126)
368 3k1r_A Harmonin; protein-prote 97.8 3.9E-05 1.3E-09 76.4 8.2 57 566-629 110-169 (192)
369 1wi4_A Synip, syntaxin binding 97.8 3.2E-05 1.1E-09 70.0 6.8 61 567-629 42-106 (109)
370 4e34_A Golgi-associated PDZ an 97.8 4.1E-05 1.4E-09 65.9 7.2 55 566-626 28-86 (87)
371 1wg6_A Hypothetical protein (r 97.8 2.7E-05 9.2E-10 72.4 6.4 60 566-629 55-123 (127)
372 1uhp_A Hypothetical protein KI 97.8 4.4E-05 1.5E-09 68.5 7.6 58 566-629 41-102 (107)
373 1wha_A KIAA0147 protein, scrib 97.8 2.8E-05 9.4E-10 69.6 6.2 58 566-629 38-99 (105)
374 2dlu_A INAD-like protein; PDZ 97.8 3.2E-05 1.1E-09 69.8 6.6 58 567-630 39-100 (111)
375 3nfk_A Tyrosine-protein phosph 97.8 4.2E-05 1.4E-09 68.5 7.2 60 566-627 43-107 (107)
376 2gzv_A PRKCA-binding protein; 97.7 6.9E-05 2.4E-09 68.3 8.3 55 566-626 50-108 (114)
377 2edv_A FERM and PDZ domain-con 97.7 8.5E-06 2.9E-10 71.9 2.1 57 566-628 31-89 (96)
378 2dc2_A GOPC, golgi associated 97.7 7.7E-05 2.6E-09 66.6 8.4 58 566-629 35-96 (103)
379 3l4f_D SH3 and multiple ankyri 97.7 6.2E-05 2.1E-09 70.5 8.0 59 566-630 65-126 (132)
380 2z17_A Pleckstrin homology SEC 97.7 5E-05 1.7E-09 67.8 6.3 53 566-624 48-103 (104)
381 2eei_A PDZ domain-containing p 97.7 2.1E-05 7.3E-10 70.3 3.9 58 566-629 32-92 (106)
382 1v6b_A Harmonin isoform A1; st 97.7 2.3E-05 8E-10 71.9 3.9 58 568-627 45-106 (118)
383 1fc6_A Photosystem II D1 prote 97.7 0.00011 3.8E-09 81.1 10.0 68 566-638 99-172 (388)
384 3hpk_A Protein interacting wit 97.6 0.00012 4.1E-09 67.6 8.4 56 566-627 45-104 (125)
385 2ehr_A INAD-like protein; PDZ 97.6 6.3E-05 2.2E-09 68.6 6.3 58 566-629 50-111 (117)
386 1ufx_A KIAA1526 protein; PDZ d 97.6 6.3E-05 2.2E-09 67.3 6.2 61 568-629 34-98 (103)
387 1uju_A Scribble; PDZ domain, c 97.6 2.3E-05 8E-10 70.8 3.1 59 565-629 43-105 (111)
388 3egg_C Spinophilin; PP1, serin 97.6 0.00019 6.4E-09 70.3 9.4 57 565-627 110-170 (170)
389 1p3c_A Glutamyl-endopeptidase; 97.6 0.00056 1.9E-08 68.6 12.9 161 316-509 30-213 (215)
390 1i16_A Interleukin 16, LCF; cy 97.6 5.2E-05 1.8E-09 70.7 4.7 59 566-629 57-119 (130)
391 3tsz_A Tight junction protein 97.5 0.00013 4.5E-09 80.7 7.8 61 566-630 31-94 (391)
392 3soe_A Membrane-associated gua 97.5 0.00026 9.1E-09 64.5 8.3 60 568-633 36-98 (113)
393 1pq7_A Trypsin; ultra-high res 97.5 0.0007 2.4E-08 68.4 12.4 90 315-412 23-125 (224)
394 1um7_A Synapse-associated prot 97.5 4.9E-05 1.7E-09 68.6 3.4 58 566-629 39-100 (113)
395 2cs5_A Tyrosine-protein phosph 97.5 9.7E-05 3.3E-09 67.5 5.3 62 566-629 41-107 (119)
396 3shw_A Tight junction protein 97.4 0.00019 6.4E-09 81.0 7.7 61 566-630 23-86 (468)
397 2lob_A Golgi-associated PDZ an 96.5 2.4E-05 8.3E-10 71.2 0.0 42 566-607 53-98 (112)
398 1gvz_A Kallikrein-1E2; antigen 97.4 0.0028 9.5E-08 64.4 15.3 85 316-412 24-135 (237)
399 1r6j_A Syntenin 1; PDZ, membra 97.4 0.00041 1.4E-08 59.6 7.4 51 570-626 27-80 (82)
400 1k32_A Tricorn protease; prote 97.3 0.00029 9.9E-09 87.1 8.6 67 674-743 748-825 (1045)
401 2krg_A Na(+)/H(+) exchange reg 97.3 9.8E-05 3.4E-09 75.1 3.2 64 567-636 34-103 (216)
402 3k50_A Putative S41 protease; 97.2 0.00018 6.2E-09 79.8 4.9 57 567-630 91-148 (403)
403 3gge_A PDZ domain-containing p 97.2 0.00081 2.8E-08 59.3 8.1 56 568-627 30-89 (95)
404 1z87_A Alpha-1-syntrophin; pro 97.2 0.00022 7.5E-09 74.6 5.2 59 566-630 103-165 (263)
405 4ag1_A Chymase; hydrolase-de n 97.2 0.0097 3.3E-07 59.8 17.2 101 293-412 13-130 (226)
406 3rp2_A RAT MAST cell protease 97.2 0.0098 3.4E-07 59.6 17.0 100 293-411 13-129 (224)
407 1hj8_A Trypsin I; hydrolase, r 97.1 0.0041 1.4E-07 62.7 13.5 85 316-412 23-123 (222)
408 1cgh_A Cathepsin G; inflammati 97.1 0.034 1.2E-06 55.9 19.9 87 315-412 26-129 (224)
409 1azz_A Collagenase; complex (s 97.1 0.0045 1.6E-07 62.6 13.1 88 315-412 23-126 (226)
410 1iau_A Granzyme B; hydrolase-h 97.1 0.011 3.9E-07 59.5 15.8 87 315-412 26-129 (227)
411 2xw9_A Complement factor D; im 97.0 0.0086 2.9E-07 60.3 14.7 90 315-412 23-130 (228)
412 1npm_A Neuropsin; serine prote 97.0 0.024 8.1E-07 57.1 17.9 86 315-412 23-127 (225)
413 1ton_A Tonin; hydrolase(serine 97.0 0.015 5.3E-07 58.8 16.5 85 316-412 22-133 (235)
414 1mza_A Pro-granzyme K; apoptos 97.0 0.067 2.3E-06 54.2 21.4 89 315-411 25-131 (240)
415 4i8h_A Cationic trypsin, beta- 97.0 0.017 5.8E-07 57.9 16.6 85 316-412 23-123 (223)
416 3mfj_A Cationic trypsin; serin 97.0 0.023 7.9E-07 57.1 17.4 85 316-412 23-123 (223)
417 1eq9_A Chymotrypsin; FIRE ANT, 97.0 0.0051 1.7E-07 62.0 12.3 90 315-412 23-127 (222)
418 1fuj_A PR3, myeloblastin; hydr 97.0 0.04 1.4E-06 55.0 18.9 90 315-412 26-132 (221)
419 1a7s_A Heparin binding protein 97.0 0.02 6.8E-07 57.6 16.6 170 315-511 23-219 (225)
420 1si5_H Scatter factor, hepatoc 97.0 0.033 1.1E-06 56.6 18.3 90 315-412 22-125 (240)
421 3fzz_A Granzyme C; hydrolase, 96.9 0.022 7.7E-07 57.0 16.7 100 293-411 13-129 (227)
422 1euf_A Duodenase; serine prote 96.9 0.028 9.6E-07 56.6 17.3 86 315-411 26-128 (227)
423 3s9c_A Vipera russelli protein 96.9 0.077 2.6E-06 53.3 20.5 171 315-512 25-227 (234)
424 2hlc_A Collagenase; serine pro 96.9 0.062 2.1E-06 54.0 19.5 103 293-412 13-130 (230)
425 1fxy_A Coagulation factor XA-t 96.9 0.025 8.4E-07 57.1 16.2 88 315-412 24-127 (228)
426 1ao5_A Glandular kallikrein-13 96.8 0.0089 3.1E-07 60.6 12.8 85 315-411 23-134 (237)
427 2z7f_E Leukocyte elastase; ser 96.8 0.018 6.1E-07 57.6 14.8 90 315-412 23-129 (218)
428 1lo6_A Kallikrein 6, HK6; seri 96.8 0.063 2.2E-06 53.9 18.9 86 315-412 23-124 (223)
429 4e7n_A Snake-venom thrombin-li 96.8 0.056 1.9E-06 54.4 18.4 177 315-512 25-231 (238)
430 2aiq_A Protein C activator; sn 96.8 0.022 7.6E-07 57.5 15.1 85 316-412 23-124 (231)
431 2qxi_A Kallikrein-7; S1 pocket 96.7 0.047 1.6E-06 54.9 17.1 85 316-412 24-122 (224)
432 3ncl_A Suppressor of tumorigen 96.7 0.021 7.3E-07 57.7 14.6 88 316-411 25-137 (241)
433 3h7t_A Group 3 allergen smipp- 96.7 0.0091 3.1E-07 60.1 11.7 179 316-512 24-231 (235)
434 3s69_A Thrombin-like enzyme de 96.7 0.037 1.3E-06 55.6 16.2 173 315-512 23-227 (234)
435 3gov_B MAsp-1; complement, ser 96.7 0.017 5.8E-07 58.6 13.7 88 316-412 25-143 (251)
436 2bdg_A Kallikrein-4; serine pr 96.7 0.026 9E-07 56.7 14.9 86 315-412 23-125 (223)
437 1m9u_A Earthworm fibrinolytic 96.7 0.0093 3.2E-07 60.6 11.3 90 315-412 26-134 (241)
438 1sgf_A 7S NGF, nerve growth fa 96.6 0.018 6.3E-07 58.5 13.5 85 316-412 27-138 (240)
439 1orf_A Granzyme A; hydrolase-h 96.6 0.033 1.1E-06 56.3 15.0 87 315-411 23-126 (234)
440 2any_A Kininogenin, plasma kal 96.6 0.031 1.1E-06 56.7 14.8 90 315-412 26-134 (241)
441 2psx_A Kallikrein-5; zinc inhi 96.6 0.076 2.6E-06 53.4 17.6 86 315-412 24-126 (227)
442 2zgc_A Granzyme M; serine prot 96.5 0.034 1.1E-06 56.7 14.7 90 315-412 23-127 (240)
443 2zch_P Prostate-specific antig 96.5 0.031 1.1E-06 56.6 14.2 86 315-412 23-135 (237)
444 3h7o_A Group 3 allergen smipp- 96.5 0.013 4.5E-07 58.7 11.2 90 316-412 26-131 (228)
445 1lvm_A Catalytic domain of the 96.5 0.099 3.4E-06 52.9 17.1 177 291-510 22-203 (229)
446 2f91_A Hepatopancreas trypsin; 96.5 0.029 9.8E-07 56.9 13.6 86 317-411 29-134 (237)
447 1k32_A Tricorn protease; prote 96.5 0.0052 1.8E-07 75.8 9.5 66 566-637 748-825 (1045)
448 3mhw_U Urokinase-type plasmino 96.4 0.22 7.6E-06 50.2 20.1 92 315-412 28-142 (247)
449 2asu_B Hepatocyte growth facto 96.4 0.14 4.8E-06 51.7 18.4 90 315-412 21-126 (234)
450 2oq5_A Transmembrane protease, 96.4 0.34 1.2E-05 48.6 20.9 89 315-411 23-126 (232)
451 3bg8_A Coagulation factor XIA 96.3 0.043 1.5E-06 55.6 13.8 90 314-411 25-133 (238)
452 3f1s_B Vitamin K-dependent pro 96.3 0.017 5.7E-07 60.6 10.8 89 315-412 76-181 (283)
453 3gyl_B Prostasin; ENAC, zymoge 96.3 0.13 4.3E-06 52.5 17.1 90 315-412 23-131 (261)
454 1spj_A Kallikrein 1; serine pr 96.2 0.33 1.1E-05 48.8 20.0 85 315-411 23-135 (238)
455 1pyt_D TC, PCPA-TC, chymotryps 96.2 0.16 5.6E-06 51.7 17.7 89 315-412 40-146 (251)
456 1arb_A Achromobacter protease 96.2 0.091 3.1E-06 54.9 15.6 76 291-378 21-122 (268)
457 3beu_A Trypsin, SGT; beta shee 96.2 0.055 1.9E-06 54.1 13.5 83 317-412 21-119 (224)
458 3h5c_B Vitamin K-dependent pro 96.1 0.071 2.4E-06 56.6 15.0 89 315-412 117-222 (317)
459 2r0l_A Hepatocyte growth facto 96.1 0.49 1.7E-05 47.9 20.8 90 316-411 23-134 (248)
460 4dgj_A Enteropeptidase catalyt 96.1 0.019 6.6E-07 57.8 9.7 89 315-411 23-132 (235)
461 1rtf_B (TC)-T-PA, two chain ti 96.1 0.46 1.6E-05 48.1 20.2 91 315-411 29-140 (252)
462 3tvj_B Mannan-binding lectin s 95.9 0.043 1.5E-06 55.3 11.5 89 316-412 22-131 (242)
463 1ym0_A Fibrinotic enzyme compo 95.9 0.075 2.6E-06 53.6 13.1 90 315-412 25-131 (238)
464 2jde_A Urokinase-type plasmino 95.9 0.53 1.8E-05 48.4 19.8 92 315-412 51-165 (276)
465 1t8o_A Chymotrypsin A; chymotr 95.7 0.34 1.2E-05 49.2 17.3 87 315-411 39-142 (245)
466 1aut_C Activated protein C; se 95.7 0.33 1.1E-05 49.4 17.1 89 315-412 24-133 (250)
467 1yph_C Chymotrypsin A, chain B 95.6 0.1 3.6E-06 47.8 11.7 87 315-411 24-127 (131)
468 1yc0_A Hepatocyte growth facto 95.6 0.83 2.8E-05 47.3 20.0 90 316-411 58-169 (283)
469 1fon_A Procarboxypeptidase A-S 95.3 0.042 1.4E-06 55.7 8.7 89 315-412 25-134 (240)
470 3cp7_A Alkaline serine proteas 95.2 0.27 9.2E-06 49.4 14.2 92 315-413 20-133 (218)
471 2jkh_A Activated factor XA hea 95.2 0.079 2.7E-06 53.7 10.3 88 315-411 24-131 (241)
472 2bz6_H Blood coagulation facto 95.2 0.1 3.6E-06 53.2 11.3 89 315-411 23-133 (254)
473 1bru_P Elastase, PPE; serine p 94.9 0.2 6.9E-06 50.7 12.5 89 315-412 27-134 (241)
474 3rm2_H Thrombin heavy chain; s 94.8 0.54 1.8E-05 47.6 15.4 90 315-412 25-143 (259)
475 1elt_A Elastase; serine protei 94.5 0.18 6E-06 50.9 10.7 88 316-412 28-134 (236)
476 1gvk_B Elastase 1, peptide inh 94.2 0.32 1.1E-05 49.2 12.0 89 315-412 27-134 (240)
477 2f9n_A Alpha I tryptase; serin 93.2 0.52 1.8E-05 47.7 11.5 89 315-411 26-131 (245)
478 1ddj_A Plasminogen; catalytic 93.2 0.55 1.9E-05 47.6 11.6 90 315-412 41-143 (247)
479 4dur_A Plasminogen, serine pro 92.8 2.4 8.3E-05 50.7 18.0 90 315-412 585-687 (791)
480 2olg_A Pro-phenoloxidase activ 92.5 0.69 2.4E-05 47.7 11.4 90 315-412 50-174 (278)
481 2bhg_A Foot-and-mouth disease 92.4 1.1 3.6E-05 45.0 12.1 159 317-505 31-204 (209)
482 2b9l_A Prophenoloxidase activa 91.4 0.86 2.9E-05 50.1 11.0 90 314-411 160-270 (394)
483 1z8g_A Serine protease hepsin; 91.2 0.91 3.1E-05 49.3 10.9 89 315-411 140-252 (372)
484 2qy0_B Complement C1R subcompo 91.1 0.36 1.2E-05 48.7 7.2 89 316-412 22-135 (242)
485 1fiw_A Beta-acrosin heavy chai 90.7 1.6 5.6E-05 45.4 12.0 89 315-411 29-142 (290)
486 3qzr_A 3C protein; chymotrypsi 90.5 11 0.00036 37.1 16.5 152 285-476 9-168 (187)
487 4dcd_A Protease 3C, genome pol 90.3 11 0.00036 37.1 16.4 153 285-477 12-172 (190)
488 2bdy_A Thrombin; thrombin, com 89.8 0.97 3.3E-05 47.0 9.3 89 315-411 55-172 (289)
489 1zjk_A Mannan-binding lectin s 89.6 0.82 2.8E-05 50.0 9.0 89 316-412 183-292 (403)
490 2vnt_A Urokinase-type plasmino 89.1 21 0.0007 36.1 22.2 108 293-411 36-164 (276)
491 2b0f_A Picornain 3C (protease 88.6 18 0.00063 35.2 16.7 151 286-477 6-164 (182)
492 4f4o_C Haptoglobin; globin fol 88.2 0.9 3.1E-05 49.0 7.8 87 316-411 126-226 (347)
493 2wph_S Coagulation factor IXA 88.1 0.92 3.2E-05 45.4 7.4 87 316-411 24-131 (235)
494 2xxl_A GRAM-positive specific 87.5 2.6 8.7E-05 46.5 11.1 89 315-411 145-266 (408)
495 3q3y_A HEVB EV93 3C protease; 87.5 23 0.00078 34.7 17.1 152 285-476 7-166 (191)
496 3zve_A 3C protease; hydrolase, 87.1 23 0.0008 34.7 16.5 154 285-477 5-165 (190)
497 1md8_A C1R complement serine p 85.8 1.4 4.6E-05 47.1 7.5 87 317-411 112-223 (329)
498 1rrk_A Complement factor B; BB 82.9 3.3 0.00011 46.2 9.4 89 291-395 225-332 (497)
499 2hal_A Hepatitis A protease 3C 82.6 41 0.0014 33.4 16.5 75 290-377 8-92 (212)
500 1elv_A Complement C1S componen 82.4 3.4 0.00012 43.7 8.9 86 317-411 104-216 (333)
No 1
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1e-50 Score=458.23 Aligned_cols=395 Identities=19% Similarity=0.287 Sum_probs=315.9
Q ss_pred hhhhhhcCcEEEEEEeecCcc----------ccCC------ccccceeEEEEEEEecCCceEEEEecceeccCCceEEEE
Q 004068 286 FAESVIEPTLVMFEVHVPPSC----------MIDG------VHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLS 349 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~----------~~Dg------~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt 349 (775)
.+++++.||||.|.+...... .++. .....+.||||||+. ++||||||+| |..++.++.|+
T Consensus 17 ~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~--~~G~IlTn~H-vv~~a~~i~V~ 93 (436)
T 4a8c_A 17 PMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINA--SKGYVLTNNH-VINQAQKISIQ 93 (436)
T ss_pred HHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEEC--CCCEEEECHH-HhCCCCEEEEE
Confidence 389999999999988653210 1111 112357899999992 3499999966 55678899999
Q ss_pred EcCCCeEEeEEEEEEeCCCcEEEEEeC-CCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCcc
Q 004068 350 FAAFPIEIPGEVVFLHPVHNFALIAYD-PSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCA 428 (775)
Q Consensus 350 ~~d~~~~~~A~Vv~~dp~~DlAILk~d-~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~ 428 (775)
+.+ +..++|++++.|+.+||||||++ +..++ +++|+++..++.||.|+++|||+++..+++.|+|+....
T Consensus 94 ~~d-g~~~~a~vv~~d~~~DlAllkv~~~~~l~--------~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r 164 (436)
T 4a8c_A 94 LND-GREFDAKLIGSDDQSDIALLQIQNPSKLT--------QIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGR 164 (436)
T ss_pred eCC-CCEEEEEEEEEcCCCCEEEEEecCCCCCc--------eEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeecc
Confidence 998 99999999999999999999995 44554 489998878999999999999999999999999997542
Q ss_pred ccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHH
Q 004068 429 ALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDK 507 (775)
Q Consensus 429 ~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~ 507 (775)
. ... ...| .++||+|+++++|+ ||||+|.+|+||||+++..... ....++.||||++.+++++++
T Consensus 165 ~-~~~---~~~~----~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~------~~~~g~gfaIP~~~~~~~~~~ 230 (436)
T 4a8c_A 165 S-GLN---LEGL----ENFIQTDASINRGNAGGALLNLNGELIGINTAILAPG------GGSVGIGFAIPSNMARTLAQQ 230 (436)
T ss_pred c-ccC---CCCc----cCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCC------CCceeEEEEEehHHHHHHHHH
Confidence 2 111 1223 37899999999998 9999999999999998765431 122345569999999999999
Q ss_pred HHcCCCCCCccccccccCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccCC
Q 004068 508 IISGASGPSLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQG 586 (775)
Q Consensus 508 l~~g~~~~~~~~~~v~r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~G 586 (775)
|++.++ +.|+ |||+.++.++...++.+|++.. .+++|..|.++|||+++ |+.|
T Consensus 231 l~~~g~--------v~r~-----~lGv~~~~~~~~~a~~~gl~~~-------------~G~~V~~V~~~spA~~aGL~~G 284 (436)
T 4a8c_A 231 LIDFGE--------IKRG-----LLGIKGTEMSADIAKAFNLDVQ-------------RGAFVSEVLPGSGSAKAGVKAG 284 (436)
T ss_pred HHhccc--------cccc-----cCceEecccCHHHHHHhCCCCC-------------cceEEEEECCCChHHHCCCCCC
Confidence 998864 5566 9999999999999999998753 56779999999999996 9999
Q ss_pred CEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccCCCCcce---eeeeeeeeecCChhhH
Q 004068 587 DMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRDGNGTTR---VINWCGCIVQDPHPAV 663 (775)
Q Consensus 587 DiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~~~~t~r---~v~~~G~~lq~p~~~v 663 (775)
|+|++|||++|.+|.++..++.... .++++.++|.|+|+++++++++.......... ...+.|..+....
T Consensus 285 D~I~~vnG~~v~~~~~l~~~l~~~~----~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~gl~~~~~~~~~--- 357 (436)
T 4a8c_A 285 DIITSLNGKPLNSFAELRSRIATTE----PGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQ--- 357 (436)
T ss_pred CEEEEECCEECCCHHHHHHHHHhcC----CCCEEEEEEEECCEEEEEEEEECCCCcccccccccccCceeeeccccc---
Confidence 9999999999999999999886544 37899999999999999999988765322111 1222333322111
Q ss_pred hhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEe
Q 004068 664 RALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQ 743 (775)
Q Consensus 664 rql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~ 743 (775)
......|++|..|.++|||+++||++||+|++|||+++.++++|.+++++ . ++.+.|+ +.|+|+.+.+++.+
T Consensus 358 -----~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~-~-~~~v~l~-v~R~g~~~~~~~~~ 429 (436)
T 4a8c_A 358 -----LKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAA-K-PAIIALQ-IVRGNESIYLLMRL 429 (436)
T ss_pred -----ccCCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHh-C-CCeEEEE-EEECCEEEEEEEEe
Confidence 01112489999999999999999999999999999999999999999998 3 4589998 79999999999988
Q ss_pred CCCC
Q 004068 744 DLHY 747 (775)
Q Consensus 744 d~~y 747 (775)
.+.+
T Consensus 430 ~~~~ 433 (436)
T 4a8c_A 430 EHHH 433 (436)
T ss_pred cccC
Confidence 7554
No 2
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-49 Score=454.80 Aligned_cols=395 Identities=14% Similarity=0.099 Sum_probs=309.1
Q ss_pred hhhcCcEEEEEEeecCcc---ccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe
Q 004068 289 SVIEPTLVMFEVHVPPSC---MIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH 365 (775)
Q Consensus 289 ~~l~~SvV~V~~~~~~~~---~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d 365 (775)
+...+|||.|.+...... +........+.||||||+ +||||||+| |+.++..|.|++..+++.++|+|++.|
T Consensus 44 ~~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~----dG~IlTN~H-VV~~a~~i~V~~~~dg~~~~A~vv~~D 118 (539)
T 4fln_A 44 ASFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG----DGKLLTNAH-CVEHDTQVKVKRRGDDRKYVAKVLVRG 118 (539)
T ss_dssp HHHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE----TTEEEECGG-GGTTEEEEEEECTTCCCCEEEEEEEEE
T ss_pred cccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE----CCEEEEChH-HcCCCCeEEEEEccCCEEEEEEEEEEC
Confidence 345689999988654211 111223455789999998 699999965 567888999999633999999999999
Q ss_pred CCCcEEEEEeCCCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCC-CeeEEEEEeCCccccccCCCCcccccccc
Q 004068 366 PVHNFALIAYDPSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQ-ATSRKSIVTNPCAALNISSADCPRYRAMN 444 (775)
Q Consensus 366 p~~DlAILk~d~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~-~~~~~g~VS~~~~~~~~~~~~~pryra~n 444 (775)
+.+||||||++...++ ..+.++.++++. +.||.|++||||+++. .+++.|+||.+........ ...
T Consensus 119 ~~~DLAvLkv~~~~~~----~~~~pl~~g~~~--~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~-------~~~ 185 (539)
T 4fln_A 119 VDCDIALLSVESEDFW----KGAEPLRLGHLP--RLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-------SSD 185 (539)
T ss_dssp TTTTEEEEEECCSSSS----TTCCCCCBCCCC--CTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTS-------CCE
T ss_pred CCCCEEEEEEeCCcCC----cCCceeecCCcC--cCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCC-------Ccc
Confidence 9999999999876553 245567888764 7899999999999876 4899999996542221111 123
Q ss_pred eEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCCCCCCccccccc
Q 004068 445 MEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGASGPSLLINGVK 523 (775)
Q Consensus 445 ~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~~~~~~~~~v~ 523 (775)
..+||+|+++++|+ ||||+|.+|+||||+++.... ....+++| |||++.+++++++|++.|+. ..
T Consensus 186 ~~~IQtDAaInpGnSGGPLvn~~GeVIGIntai~~~-----~~~~gigf--AIP~~~v~~vl~~l~~~G~~-------~~ 251 (539)
T 4fln_A 186 LLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRS-----EETENIGY--VIPTTVVSHFLTDYERNGKY-------TG 251 (539)
T ss_dssp EEEEEESSCCCTTTTTSEEECSSSCEEEEECCCC----------CCCEE--EEEHHHHHHHHHHHHTTTSC-------CC
T ss_pred eeEEEEEeEecCCCccchhccCCCcEEEEEEEEecC-----CCCCccee--cccHHHHHHHHHHHHHcCeE-------Ee
Confidence 46899999999998 999999999999999865433 12355665 99999999999999887642 12
Q ss_pred cCCCcceEEEEEEEEc-ChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChhh
Q 004068 524 RPMPLVRILEVELYPT-LLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFHD 602 (775)
Q Consensus 524 r~~p~~~~Lgve~~~i-~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~d 602 (775)
|+ |||+.++++ ....++.+|++.. ++++|..|.++|||+++|+.||+|++|||++|.+..+
T Consensus 252 r~-----~LGv~~~~~~~~~~~~~~~l~~~-------------~Gv~V~~V~~~spA~~al~~GDvI~~idg~~V~~~g~ 313 (539)
T 4fln_A 252 YP-----CLGVLLQKLENPALRECLKVPTN-------------EGVLVRRVEPTSDASKVLKEGDVIVSFDDLHVGCEGT 313 (539)
T ss_dssp CC-----BCCEEEEECCCHHHHHHHTCSSS-------------BCEEEEEECTTSGGGGTCCTTCEEEEETTEECBSSSE
T ss_pred ee-----ecceEEEecCCHHHHHhcCCCCc-------------CceeeecccCCChHHhCccCCCEEEEECCEEeCcCCe
Confidence 45 999999987 5566777888754 6777999999999998999999999999999987654
Q ss_pred ----------HHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccCCCC-------cceeeeeeeeeecCChhhHhh
Q 004068 603 ----------IENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRDGNG-------TTRVINWCGCIVQDPHPAVRA 665 (775)
Q Consensus 603 ----------l~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~~~~-------t~r~v~~~G~~lq~p~~~vrq 665 (775)
|..++.... .|++++++|+|+|++++++|++...+... ..++..++|+.+++++...++
T Consensus 314 ~~~~~~~~~~l~~~v~~~~----~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~ 389 (539)
T 4fln_A 314 VPFRSSERIAFRYLISQKF----AGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIE 389 (539)
T ss_dssp EECSTTCEEETHHHHHTSC----TTCEEEEEEEETTEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHT
T ss_pred eccccchhHHHHHHHHcCC----CCCEEEEEEEECCEEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHHH
Confidence 566676555 38999999999999999999998765321 234577899999988877654
Q ss_pred h-CC----------------CCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEE
Q 004068 666 L-GF----------------LPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVR 728 (775)
Q Consensus 666 l-~~----------------lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~ 728 (775)
. +. .....+||+|+.|.++++|..||+++||+|++|||++|.++++|.+++++ .++++++|+
T Consensus 390 ~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l~~~l~~-~k~~~l~~~ 468 (539)
T 4fln_A 390 EECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDM-CKDKYLVFE 468 (539)
T ss_dssp TSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHHHHHHHHT-CCSSEEEEE
T ss_pred hhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHHHHHHHHH-cCCCeEEEE
Confidence 1 10 01134689999999999999999999999999999999999999999999 568999998
Q ss_pred EEEeCCeEEEEE
Q 004068 729 TVHLNGKPRVLT 740 (775)
Q Consensus 729 ~V~Rdg~~~~lt 740 (775)
+ .+|+..++.
T Consensus 469 ~--~~~~~ivL~ 478 (539)
T 4fln_A 469 F--EDNYVAVLE 478 (539)
T ss_dssp E--TTSCEEEEE
T ss_pred E--CCCEEEEEE
Confidence 3 466666654
No 3
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=9.5e-51 Score=459.81 Aligned_cols=395 Identities=18% Similarity=0.188 Sum_probs=307.2
Q ss_pred hhhhhhcCcEEEEEEeecCcc---------------ccCCc---------cccceeEEEEEEEecCCceEEEEecceecc
Q 004068 286 FAESVIEPTLVMFEVHVPPSC---------------MIDGV---------HSQHFFGTGVIIYHSQSMGLVVVDKNTVAI 341 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~---------------~~Dg~---------~~~~~~GSGvVId~~~~~GlVLTnr~~V~~ 341 (775)
.+++++.||||.|.+...... .+-+. ....+.||||||+ .++||||||+| |..
T Consensus 23 ~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~--~~~G~IlTn~H-Vv~ 99 (451)
T 3pv2_A 23 PVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIID--PNNGVIITNDH-VIR 99 (451)
T ss_dssp HHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEE--TTTTEEEECHH-HHT
T ss_pred HHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEE--CCCCEEEEChH-HhC
Confidence 389999999999998642100 01110 1234679999999 34599999966 556
Q ss_pred CCceEEEEEcCCCeEEeEEEEEEeCCCcEEEEEeCCCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCC-----C
Q 004068 342 SASDVMLSFAAFPIEIPGEVVFLHPVHNFALIAYDPSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQ-----A 416 (775)
Q Consensus 342 ~~~~I~Vt~~d~~~~~~A~Vv~~dp~~DlAILk~d~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~-----~ 416 (775)
++..+.|++.+ +..++|++++.|+.+||||||+++..+++ +.|+++..++.||.|+++|||+++. .
T Consensus 100 ~a~~i~V~~~d-g~~~~a~vv~~d~~~DlAlLkv~~~~l~~--------~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~ 170 (451)
T 3pv2_A 100 NASLITVTLQD-GRRLKARLIGGDSETDLAVLKIDAKNLKS--------LVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQ 170 (451)
T ss_dssp TEEEEEEECTT-SCEEECEEEEEETTTTEEEEECCCSSCCC--------CCBCCGGGCCTTCEEEEEECCCCC-----CC
T ss_pred CCCEEEEEEcC-CCEEEEEEEecCcCCcEEEEEEcCcCCce--------eEecCcccCCCCCEEEEEECCCCccccccCC
Confidence 78899999998 99999999999999999999998866654 8898887799999999999999988 8
Q ss_pred eeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeec
Q 004068 417 TSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRG 495 (775)
Q Consensus 417 ~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~a 495 (775)
+++.|+|+..... ......| .++||+|+++++|+ ||||+|.+|+||||+++..... + ...+. .||
T Consensus 171 ~vt~Givs~~~r~----~~~~~~~----~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~--~--~~~g~--gfa 236 (451)
T 3pv2_A 171 SATFGIVSALKRS----DLNIEGV----ENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPY--G--GNVGI--GFA 236 (451)
T ss_dssp EEEEEEEEEEC------------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC----------CCC--EEE
T ss_pred ceeEEEEeecccc----ccCCCCc----ceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCC--C--Cccce--eee
Confidence 8999999965322 1111123 36899999999987 9999999999999998654431 1 12344 459
Q ss_pred cccchhhhHHHHHHcCCCCCCccccccccCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcC
Q 004068 496 IPIYTISRVLDKIISGASGPSLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLA 575 (775)
Q Consensus 496 IPi~~i~~vl~~l~~g~~~~~~~~~~v~r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~ 575 (775)
||++.+++++++|+++++ +.|+ |||+.+++++...++.+|++... ++++|..|.+
T Consensus 237 IP~~~~~~~~~~l~~~g~--------v~r~-----~lGv~~~~~~~~~a~~~gl~~~~------------~G~~V~~V~~ 291 (451)
T 3pv2_A 237 IPINMVKDVAQQIIKFGS--------IHRG-----LMGIFVQHLTPELAQAMGYPEDF------------QGALVSQVNP 291 (451)
T ss_dssp EEHHHHHHHHHHHHHHSS--------CCCC-----BCCEEEEECCHHHHHHTTSCTTC------------CCEEEEEECT
T ss_pred ehhHHHHHHHHHHHhcCC--------cccc-----cccceEEeccHHHHHhcCCCcCC------------ceEEEEecCC
Confidence 999999999999998764 5566 99999999999999999998531 4566999999
Q ss_pred CChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccCCCCc---ceeeee
Q 004068 576 GSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRDGNGT---TRVINW 651 (775)
Q Consensus 576 gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~~~~t---~r~v~~ 651 (775)
+|||+++ |+.||+|++|||++|.+|.++..++.... .++++.++|.|+|+++++++++........ .....+
T Consensus 292 ~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~----~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~ 367 (451)
T 3pv2_A 292 NSPAELAGLKAGDIITQINDTKITQATQVKTTISLLR----VGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPFL 367 (451)
T ss_dssp TSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSC----TTCEEEEEEEETTEEEEEEEECBCHHHHHHHHHHHSTTT
T ss_pred CChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcC----CCCEEEEEEEECCEEEEEEEEEccCCccccccccccccc
Confidence 9999996 99999999999999999999999987554 378999999999999999998876531100 001123
Q ss_pred eeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEE
Q 004068 652 CGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVH 731 (775)
Q Consensus 652 ~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~ 731 (775)
.|+.+.......... . ...|++|..|.+||||+++||++||+|++|||+++.++++|.+++++ .++.+.|+ +.
T Consensus 368 ~G~~l~~~~~~~~~~---~-~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~--~~~~v~l~-v~ 440 (451)
T 3pv2_A 368 YGLALRAFEQESPPH---G-NVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQE--KKKELLVQ-VL 440 (451)
T ss_dssp TTEEEEEEEEECTTS---C-EEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTTS--SCSCEEEE-EE
T ss_pred cccccccCChhHhcc---c-CCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHhc--CCCeEEEE-EE
Confidence 444444322111111 0 12389999999999999999999999999999999999999999997 57889998 78
Q ss_pred eCCeEEEEEEE
Q 004068 732 LNGKPRVLTLK 742 (775)
Q Consensus 732 Rdg~~~~ltlk 742 (775)
|+|+.++++|+
T Consensus 441 R~g~~~~v~l~ 451 (451)
T 3pv2_A 441 RGPGSMYLLVI 451 (451)
T ss_dssp ETTEEEEEEEC
T ss_pred ECCEEEEEEeC
Confidence 99999888763
No 4
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=2.1e-48 Score=440.30 Aligned_cols=357 Identities=18% Similarity=0.270 Sum_probs=219.4
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEeCCCcEEEEEeCC-CCCCcccccceeeeeeC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLHPVHNFALIAYDP-SSLGVAGASVVRAAELL 394 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~dp~~DlAILk~d~-~~l~~~~~~~v~~~~lg 394 (775)
..||||||+ .++||||||+| |..++..+.|++.+ +..++|++++.|+.+||||||++. ..+++ ++|+
T Consensus 86 ~~GSG~ii~--~~~g~IlTn~H-Vv~~a~~i~V~~~d-g~~~~a~vv~~d~~~DlAvlkv~~~~~~~~--------~~l~ 153 (448)
T 1ky9_A 86 ALGSGVIID--ADKGYVVTNNH-VVDNATVIKVQLSD-GRKFDAKMVGKDPRSDIALIQIQNPKNLTA--------IKMA 153 (448)
T ss_dssp EEEEEEEEE--TTTTEEEEEHH-HHTTEEEEEEEETT-SCEEEEEEEEEETTTTEEEEEESSCCSCCC--------CCBC
T ss_pred cEEEEEEEE--CCCCEEEEChH-HhCCCCEEEEEECC-CCEEEEEEEEEcCCCCEEEEEecCCCCCce--------EEec
Confidence 579999999 23599999966 55678899999998 999999999999999999999974 45554 8999
Q ss_pred CCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEEEe
Q 004068 395 PEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAIW 473 (775)
Q Consensus 395 ~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~ 473 (775)
++..++.||.|+++|||+++..+++.|+||..... ... ...| ..+||+|+++++|+ ||||+|.+|+||||+
T Consensus 154 ~s~~~~~G~~V~aiG~P~g~~~tvt~Givs~~~r~-~~~---~~~~----~~~iqtda~i~~GnSGGpl~n~~G~vvGI~ 225 (448)
T 1ky9_A 154 DSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRS-GLN---AENY----ENFIQTDAAINRGNAGGALVNLNGELIGIN 225 (448)
T ss_dssp CGGGCCTTCEEEEEECTTSSSCEEEEEEEEEESSC-C--------C----CCCEEESCCCTTSCCCSEEECTTSCEEEEE
T ss_pred ccccCCCCCEEEEEECCCCCCCeEEeEEEeecccc-ccC---CCCc----cCEEEEcCCCCCCCCCCeeECCCCEEEEEE
Confidence 88779999999999999999999999999965321 011 1122 37899999999998 999999999999999
Q ss_pred eeecccccccCCCCCCceeeeccccchhhhHHHHHHcCCCCCCccccccccCCCcceEEEEEEEEcChhhhhhcCCChhH
Q 004068 474 GSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGASGPSLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDDW 553 (775)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~~~~~~~~~v~r~~p~~~~Lgve~~~i~~~~ar~lGls~~w 553 (775)
++..... ....+.+ ||||++.+++++++|+++++ +.|+ |||+.++.++...++.+|++..
T Consensus 226 ~~~~~~~----~~~~g~g--faIP~~~~~~~~~~l~~~g~--------v~~~-----~LGv~~~~~~~~~a~~lgl~~~- 285 (448)
T 1ky9_A 226 TAILAPD----GGNIGIG--FAIPSNMVKNLTSQMVEYGQ--------VKRG-----ELGIMGTELNSELAKAMKVDAQ- 285 (448)
T ss_dssp ECSSTTS----CCCSSSE--EEEEHHHHHHHHHHHHHHSS--------CCBC-----CCCCSCCCTTSHHHHTSCCTTC-
T ss_pred EEeecCC----CCcccee--eeeecccchhhHHHHhhhcc--------ccee-----ccccccccccHHHHHHhCCCCC-
Confidence 8654431 1124455 48999999999999998764 4556 8999999988888888998753
Q ss_pred HhhhhhcCCCccceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEE
Q 004068 554 VQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIE 632 (775)
Q Consensus 554 i~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~ 632 (775)
.+++|..|.++|||+++ |+.||+|++|||++|.++.++..++.... .++++.++|.|+|++++
T Consensus 286 ------------~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~----~g~~v~l~v~R~g~~~~ 349 (448)
T 1ky9_A 286 ------------RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMP----VGSKLTLGLLRDGKQVN 349 (448)
T ss_dssp ------------CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSB----TTCCCEEEEESSSCEEE
T ss_pred ------------CceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcC----CCCEEEEEEEECCEEEE
Confidence 56679999999999986 99999999999999999999998885433 37889999999999988
Q ss_pred EEEEecccCCCC---cceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH
Q 004068 633 LQVGTDVRDGNG---TTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL 709 (775)
Q Consensus 633 l~V~l~~~~~~~---t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl 709 (775)
+++++....... ......++|+.++... ...|++|..|.++|||+++||++||+|++|||+++.++
T Consensus 350 ~~v~~~~~~~~~~~~~~~~~~~~G~~l~~~~-----------~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~ 418 (448)
T 1ky9_A 350 VNLELQQSSQNQVDSSSIFNGIEGAEMSNKG-----------KDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNI 418 (448)
T ss_dssp CCCC----------------------------------------------------------------------------
T ss_pred EEEEEecCCCcccccccccccccceEeeccC-----------CCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCH
Confidence 887765432110 0111223455544321 12389999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEE
Q 004068 710 EAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLK 742 (775)
Q Consensus 710 ~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk 742 (775)
++|.++++.. ++ .+.|+ +.|+|+.++++++
T Consensus 419 ~~l~~~l~~~-~~-~v~l~-v~R~g~~~~~~l~ 448 (448)
T 1ky9_A 419 AELRKVLDSK-PS-VLALN-IQRGDSTIYLLMQ 448 (448)
T ss_dssp ---------------------------------
T ss_pred HHHHHHHHcC-CC-eEEEE-EEECCEEEEEEeC
Confidence 9999999873 34 78888 7899998877653
No 5
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=8.9e-40 Score=358.08 Aligned_cols=301 Identities=20% Similarity=0.283 Sum_probs=243.6
Q ss_pred hhhhhhcCcEEEEEEeecCc----------cccCC------ccccceeEEEEEEEecCCceEEEEecceeccCCceEEEE
Q 004068 286 FAESVIEPTLVMFEVHVPPS----------CMIDG------VHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLS 349 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~----------~~~Dg------~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt 349 (775)
.+++++.||||.|.+..... ..++. .....+.||||||+. ++||||||+| |..++..+.|+
T Consensus 17 ~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~--~~G~IlTnaH-Vv~~~~~i~V~ 93 (345)
T 3stj_A 17 PMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINA--SKGYVLTNNH-VINQAQKISIQ 93 (345)
T ss_dssp HHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEET--TTTEEEECHH-HHTTEEEEEEE
T ss_pred HHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEEC--CCCEEEEChH-HhCCCCEEEEE
Confidence 38999999999999876421 01111 012357899999992 3499999966 55678899999
Q ss_pred EcCCCeEEeEEEEEEeCCCcEEEEEeC-CCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCcc
Q 004068 350 FAAFPIEIPGEVVFLHPVHNFALIAYD-PSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCA 428 (775)
Q Consensus 350 ~~d~~~~~~A~Vv~~dp~~DlAILk~d-~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~ 428 (775)
+.+ +..++|++++.|+.+||||||++ +..+++ ++|+++..++.||.|+++|+|.++..+.+.|+|+....
T Consensus 94 ~~d-g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~--------~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~ 164 (345)
T 3stj_A 94 LND-GREFDAKLIGSDDQSDIALLQIQNPSKLTQ--------IAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGR 164 (345)
T ss_dssp CTT-SCEEEEEEEEEETTTTEEEEEESSCCSCCC--------CCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEE
T ss_pred eCC-CcEEEEEEEEEcCCCCEEEEEEcccCCCce--------EeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeecc
Confidence 998 99999999999999999999995 445544 88988877999999999999999999999999996532
Q ss_pred ccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHH
Q 004068 429 ALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDK 507 (775)
Q Consensus 429 ~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~ 507 (775)
. .... ..| ..+|++|+++++|+ ||||+|.+|+||||+++..... ....+.+ ||||++.+++++++
T Consensus 165 ~-~~~~---~~~----~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~----~~~~g~g--faIP~~~~~~~~~~ 230 (345)
T 3stj_A 165 S-GLNL---EGL----ENFIQTDASINRGNSGGALLNLNGELIGINTAILAPG----GGSVGIG--FAIPSNMARTLAQQ 230 (345)
T ss_dssp C-CSSS---SSS----CCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTT----SSCSSCE--EEEEHHHHHHHHHH
T ss_pred c-ccCC---CCc----cCEEEEecccCCCcCccceeCCCCEEEEEEeccccCC----CCcceeE--EEEehHHHHHHHHH
Confidence 2 1111 112 36899999999998 9999999999999998765431 1133444 59999999999999
Q ss_pred HHcCCCCCCccccccccCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccCC
Q 004068 508 IISGASGPSLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQG 586 (775)
Q Consensus 508 l~~g~~~~~~~~~~v~r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~G 586 (775)
|++.++ +.|+ |||+.++.++...++.+|++.. ++++|..|.++|||+++ |++|
T Consensus 231 l~~~g~--------v~~~-----~lGv~~~~~~~~~a~~~gl~~~-------------~G~~V~~V~~~spA~~aGL~~G 284 (345)
T 3stj_A 231 LIDFGE--------IKRG-----LLGIKGTEMSADIAKAFNLDVQ-------------RGAFVSEVLPGSGSAKAGVKAG 284 (345)
T ss_dssp HHHHSS--------CCCE-----ECCEEEEECCHHHHHHTTCSCC-------------SSEEEEEECTTSHHHHHTCCTT
T ss_pred HHhccc--------cccc-----ccceeeEeecHHHHHhcCCCCC-------------ceEEEEEeccCChHHHcCCCCC
Confidence 998764 5556 9999999999999999998753 56779999999999996 9999
Q ss_pred CEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccCC
Q 004068 587 DMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRDG 642 (775)
Q Consensus 587 DiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~~ 642 (775)
|+|++|||++|+++.++..++.... .|+++.++|.|+|+++++++++....+
T Consensus 285 DvI~~ing~~v~~~~~l~~~l~~~~----~g~~v~l~v~R~g~~~~~~v~l~~~~~ 336 (345)
T 3stj_A 285 DIITSLNGKPLNSFAELRSRIATTE----PGTKVKLGLLRNGKPLEVEVTLDTSTS 336 (345)
T ss_dssp CEECEETTEECSCHHHHHHHHHTSC----TTCEEEEEEEETTEEEEEEEECEEC--
T ss_pred CEEEEECCEECCCHHHHHHHHHhcC----CCCEEEEEEEECCEEEEEEEEEcccCC
Confidence 9999999999999999999987654 378999999999999999999887653
No 6
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=8.2e-37 Score=331.21 Aligned_cols=300 Identities=15% Similarity=0.219 Sum_probs=239.8
Q ss_pred hhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe
Q 004068 286 FAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH 365 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d 365 (775)
.+++++.+|+|.|.+..+.. ..++.......||||+|+ ++||||||+|+| .+...+.|++.+ +..++|++++.|
T Consensus 13 ~~~~~~~~sVV~I~~~~~~~-~~~~~~~~~~~gsG~iI~---~~G~IlT~aHvv-~~~~~i~V~~~~-g~~~~a~v~~~d 86 (318)
T 1te0_A 13 LAVRRAAPAVVNVYNRGLNT-NSHNQLEIRTLGSGVIMD---QRGYIITNKHVI-NDADQIIVALQD-GRVFEALLVGSD 86 (318)
T ss_dssp HHHHHHGGGEEEEEEEEECS-SSSCCEEEEEEEEEEECS---TTCEEEEEHHHH-TTCSEEEEECTT-SCEEEEEEEEEE
T ss_pred HHHHhcCCcEEEEEeEeccC-CcccccccCccEEEEEEe---CCCEEEECHHHc-CCCCEEEEEeCC-CCEEEEEEEEeC
Confidence 38899999999999877521 112223346789999999 568999997755 567789999997 899999999999
Q ss_pred CCCcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccc
Q 004068 366 PVHNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMN 444 (775)
Q Consensus 366 p~~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n 444 (775)
+..||||||++.. .++ +++|+++..++.|+.|+++|+|.+...+.+.|+|+...... .... ..
T Consensus 87 ~~~DlAllk~~~~~~~~--------~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~-~~~~-------~~ 150 (318)
T 1te0_A 87 SLTDLAVLIIKATGGLP--------TIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIG-LNPT-------GR 150 (318)
T ss_dssp TTTTEEEEECCCSSCCC--------CCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCC-CCTT-------CS
T ss_pred CCceEEEEEEeCCCCCc--------eEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccc-cCCC-------Cc
Confidence 9999999999865 444 38888776699999999999999988889999999653111 1110 11
Q ss_pred eEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCCCCCCccccccc
Q 004068 445 MEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGASGPSLLINGVK 523 (775)
Q Consensus 445 ~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~~~~~~~~~v~ 523 (775)
..+|++|+++++|+ ||||+|.+|+|+||++....... .+....+ +.||||++.+++++++|+++++ +.
T Consensus 151 ~~~i~~d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~-~~~~~~~--~~~aip~~~i~~~l~~l~~~g~--------~~ 219 (318)
T 1te0_A 151 QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSN-DGETPEG--IGFAIPFQLATKIMDKLIRDGR--------VI 219 (318)
T ss_dssp CCSEEESSCCCTTTTTSEEECTTCCEEEEEECCSSSSS-SCCSCCS--CEEEEEHHHHHHHHHHHHHHSS--------CC
T ss_pred CCEEEECCCCCCCCCcCceECCCCeEEEEEeeeeccCC-ccccccc--eEEeccHHHHHHHHHHHHHcCC--------cc
Confidence 36789999999987 99999999999999975443200 0001233 4459999999999999988754 44
Q ss_pred cCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhh
Q 004068 524 RPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHD 602 (775)
Q Consensus 524 r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~d 602 (775)
|+ |||+.++.++...++.+|++.. .+++|..|.++|||+++ |++||+|++|||++|.++.+
T Consensus 220 ~~-----~lGi~~~~~~~~~~~~~g~~~~-------------~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~ 281 (318)
T 1te0_A 220 RG-----YIGIGGREIAPLHAQGGGIDQL-------------QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALE 281 (318)
T ss_dssp CE-----ECCEEEEECSCCCSSSSCSSSC-------------CCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHH
T ss_pred cc-----cceeEeeecchhHHHhccCCCC-------------CcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHH
Confidence 45 9999999998888888887643 56779999999999996 99999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEeccc
Q 004068 603 IENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVR 640 (775)
Q Consensus 603 l~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~ 640 (775)
+..++.... .++++.|+|.|+|+.+++++++...
T Consensus 282 l~~~l~~~~----~g~~v~l~v~R~g~~~~~~v~~~~~ 315 (318)
T 1te0_A 282 TMDQVAEIR----PGSVIPVVVMRDDKQLTLQVTIQEY 315 (318)
T ss_dssp HHHHHHTSC----TTCEEEEEEESSSCEEEEEEECEEC
T ss_pred HHHHHHhcC----CCCEEEEEEEECCEEEEEEEEEccC
Confidence 999986544 3789999999999999999987654
No 7
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=2.2e-35 Score=323.81 Aligned_cols=299 Identities=17% Similarity=0.248 Sum_probs=233.5
Q ss_pred hhhhhhcCcEEEEEEeecCcccc--CCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEE
Q 004068 286 FAESVIEPTLVMFEVHVPPSCMI--DGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVF 363 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~~~--Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~ 363 (775)
..++++.+|+|.|.........+ +......+.||||+|+ ++||||||+|+| .++..+.|++.+ +..++|++++
T Consensus 21 ~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~---~~G~IlT~aHvv-~~~~~i~V~~~~-g~~~~a~~v~ 95 (348)
T 3qo6_A 21 RLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWD---KQGHIVTNYHVI-RGASDLRVTLAD-QTTFDAKVVG 95 (348)
T ss_dssp HHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEE---TTTEEEECHHHH-TTCSEEEEECTT-SCEEEEEEEE
T ss_pred HHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEe---CCCEEEECHHHh-CCCcEEEEEECC-CCEEEEEEEE
Confidence 37899999999998865421111 1111235789999999 679999997654 677899999998 9999999999
Q ss_pred EeCCCcEEEEEeCCCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCccccccc
Q 004068 364 LHPVHNFALIAYDPSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAM 443 (775)
Q Consensus 364 ~dp~~DlAILk~d~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~ 443 (775)
.|+..||||||++... ..+.+++|+++..++.|+.|+++|+|.+...+.+.|+|+.....+..... ...
T Consensus 96 ~d~~~DlAlLkl~~~~------~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~-----~~~ 164 (348)
T 3qo6_A 96 FDQDKDVAVLRIDAPK------NKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAAT-----GRP 164 (348)
T ss_dssp EEGGGTEEEEECCCCG------GGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSS-----SSC
T ss_pred EcCcCCEEEEEEcCCC------CCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccC-----CCc
Confidence 9999999999997531 13445889887779999999999999999999999999975422221111 112
Q ss_pred ceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCCCCCCcccccc
Q 004068 444 NMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGASGPSLLINGV 522 (775)
Q Consensus 444 n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~~~~~~~~~v 522 (775)
...+|++|+.+++|+ ||||+|.+|+||||+++..... ....+.+ ||||++.+++++++|+++++ +
T Consensus 165 ~~~~i~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~----~~~~g~g--faiP~~~~~~~~~~l~~~g~--------~ 230 (348)
T 3qo6_A 165 IQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPS----GASSGVG--FSIPVDTVGGIVDQLVRFGK--------V 230 (348)
T ss_dssp EEEEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECSS----SSCSSCE--EEEEHHHHHHHHHHHHHHSS--------C
T ss_pred ccCEEEEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCC----CCcccEE--EEEEecchHHHHHHHHhCCc--------e
Confidence 247899999999987 9999999999999998654431 1124444 58999999999999998764 5
Q ss_pred ccCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccC-----------CCEEE
Q 004068 523 KRPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQ-----------GDMML 590 (775)
Q Consensus 523 ~r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~-----------GDiIL 590 (775)
.|+ |||+.+.+.. .++.+|+ ++++|..|.++|||+++ |+. ||+|+
T Consensus 231 ~~~-----~lGi~~~~~~--~~~~~~~----------------~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~ 287 (348)
T 3qo6_A 231 TRP-----ILGIKFAPDQ--SVEQLGV----------------SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIIT 287 (348)
T ss_dssp CCE-----ECCCEECCTT--TTTTTTC----------------SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEEC
T ss_pred eee-----ecCcEEccch--hhhhcCC----------------ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEE
Confidence 556 9999876432 1222221 56779999999999996 999 99999
Q ss_pred EECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccC
Q 004068 591 AINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRD 641 (775)
Q Consensus 591 sVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~ 641 (775)
+|||++|.+|.++..++.... .|++++++|.|+|+++++++++...+
T Consensus 288 ~ing~~v~~~~dl~~~l~~~~----~g~~v~l~v~R~g~~~~~~v~l~~~~ 334 (348)
T 3qo6_A 288 SVNGTKVSNGSDLYRILDQCK----VGDEVTVEVLRGDHKEKISVTLEPKP 334 (348)
T ss_dssp EETTBCCSSSHHHHHHHTTCC----TTCEEEEEEECSSSEEEEEEECEECC
T ss_pred EECCEEeCCHHHHHHHHHhCC----CcCEEEEEEEECCEEEEEEEEEccCC
Confidence 999999999999999985444 37899999999999999999987664
No 8
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=9e-35 Score=315.86 Aligned_cols=294 Identities=19% Similarity=0.276 Sum_probs=224.6
Q ss_pred hhhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCC--------ceEEEEEcCCCeE
Q 004068 285 SFAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISA--------SDVMLSFAAFPIE 356 (775)
Q Consensus 285 ~~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~--------~~I~Vt~~d~~~~ 356 (775)
...++++.+|+|.|.+... .....||||+|+ ++||||||+|+|.... ..+.|++.+ +..
T Consensus 9 ~~~~~~~~~svV~I~~~~~---------~~~~~gsG~iI~---~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~-g~~ 75 (324)
T 1y8t_A 9 EQVAAKVVPSVVMLETDLG---------RQSEEGSGIILS---AEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD-GRT 75 (324)
T ss_dssp HHHHHHHGGGEEEEEEEC-------------CEEEEEECC---TTSEEEEEHHHHTTCC--------CEEEEEETT-CCE
T ss_pred HHHHHHhcCcEEEEEEEcc---------CCCceEEEEEEe---CCCEEEEChHHcCCcccccccCCceEEEEEeCC-CCE
Confidence 3488999999999987544 245789999999 4689999988765432 379999997 899
Q ss_pred EeEEEEEEeCCCcEEEEEeCC-CCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCC
Q 004068 357 IPGEVVFLHPVHNFALIAYDP-SSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSA 435 (775)
Q Consensus 357 ~~A~Vv~~dp~~DlAILk~d~-~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~ 435 (775)
++|++++.|+..||||||++. ..++ ++.|+++..++.|+.|+++|+|.+...+.+.|+|+.....+.....
T Consensus 76 ~~a~vv~~d~~~DlAllkl~~~~~~~--------~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~ 147 (324)
T 1y8t_A 76 APFTVVGADPTSDIAVVRVQGVSGLT--------PISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGE 147 (324)
T ss_dssp ECEEEEECCTTTTEEEEEECSCCSCC--------CCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC---
T ss_pred EEEEEEEeCCCCCEEEEEECCCCCCc--------eEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccc
Confidence 999999999999999999985 3444 4889887668999999999999998888899999965322221110
Q ss_pred CcccccccceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccc-cCCCCCCceeeeccccchhhhHHHHHHcCCC
Q 004068 436 DCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKF-GCSSSEDHQFVRGIPIYTISRVLDKIISGAS 513 (775)
Q Consensus 436 ~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~-~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~ 513 (775)
..|......+|++|+.+++|+ ||||+|.+|+||||++........ +.......++.||||++.+++++++|+++++
T Consensus 148 --~g~~~~~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~ 225 (324)
T 1y8t_A 148 --AGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGK 225 (324)
T ss_dssp ------CCCEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSC
T ss_pred --cCcccccCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCC
Confidence 112123357999999999987 999999999999999865432100 0000112344569999999999999988754
Q ss_pred CCCccccccccCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccCCCEEEEE
Q 004068 514 GPSLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQGDMMLAI 592 (775)
Q Consensus 514 ~~~~~~~~v~r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~GDiILsV 592 (775)
+.|+ +||+.+.... ...+++|..|.++|||+++ ||.||+|++|
T Consensus 226 --------~~~~-----~lGi~~~~~~-----------------------~~~g~~V~~v~~~spA~~aGl~~GD~I~~i 269 (324)
T 1y8t_A 226 --------ASHA-----SLGVQVTNDK-----------------------DTLGAKIVEVVAGGAAANAGVPKGVVVTKV 269 (324)
T ss_dssp --------CCCE-----ECCEEEESCS-----------------------SSSSEEEEEECTTSTTTTTTCCTTCEEEEE
T ss_pred --------cccc-----ccceEeeecc-----------------------CCCceEEEEECCCChHHHcCCCCCCEEEEE
Confidence 3344 9999876421 1245679999999999996 9999999999
Q ss_pred CCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEe-cCeEEEEEEEecccC
Q 004068 593 NKQPVTCFHDIENACQALDKDGEDNGKLDITIFR-QGREIELQVGTDVRD 641 (775)
Q Consensus 593 NGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R-~Gk~~~l~V~l~~~~ 641 (775)
||++|.+|.++..++.... .++++.++|.| +|+++++++++....
T Consensus 270 ng~~v~~~~~l~~~l~~~~----~g~~v~l~v~R~~g~~~~~~v~~~~~~ 315 (324)
T 1y8t_A 270 DDRPINSADALVAAVRSKA----PGATVALTFQDPSGGSRTVQVTLGKAE 315 (324)
T ss_dssp TTEECCSHHHHHHHHHTSC----TTCEEEEEEECSSCCEEEEEEECEEC-
T ss_pred CCEECCCHHHHHHHHHhcC----CCCEEEEEEEECCCCEEEEEEEEccCC
Confidence 9999999999999886544 37899999999 999999999887654
No 9
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=9.5e-35 Score=315.94 Aligned_cols=301 Identities=22% Similarity=0.228 Sum_probs=230.1
Q ss_pred hhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe
Q 004068 286 FAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH 365 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d 365 (775)
..++++.+|+|.|++... ..+++.......||||+|+ ++||||||+|+| .+...+.|++.+ +..++|++++.|
T Consensus 19 ~~~~~~~~sVV~I~~~~~--~~~~~~~~~~~~gsG~iI~---~~G~IlT~aHvv-~~~~~i~V~~~~-g~~~~a~v~~~d 91 (325)
T 1lcy_A 19 DVVEKTAPAVVYIEILDR--HPFLGREVPISNGSGFVVA---ADGLIVTNAHVV-ADRRRVRVRLLS-GDTYEAVVTAVD 91 (325)
T ss_dssp HHHHHHGGGEEEEEEEEE--ETTTTEEEEEEEEEEEEEE---TTTEEEECHHHH-TTCSEEEEECTT-SCEEEEEEEEEE
T ss_pred HHHHHhCCcEEEEEEEec--CccCCCccccccEEEEEEe---CCCEEEECHHHc-CCCCEEEEEeCC-CCEEEEEEEEEC
Confidence 378899999999987544 2344443445789999999 578999997655 567789999997 899999999999
Q ss_pred CCCcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccc
Q 004068 366 PVHNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMN 444 (775)
Q Consensus 366 p~~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n 444 (775)
+..||||||++.. .++ +++|+++..++.|+.|+++|+|.+...+.+.|+|+........ .. +....
T Consensus 92 ~~~DlAllkl~~~~~~~--------~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~--~g---~~~~~ 158 (325)
T 1lcy_A 92 PVADIATLRIQTKEPLP--------TLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARD--LG---LPQTN 158 (325)
T ss_dssp TTTTEEEEECCCSSCCC--------CCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC--------------C
T ss_pred CCCCEEEEEEcCCCCCc--------eEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccc--cC---CCCCC
Confidence 9999999999753 444 3789887668999999999999998888999999975321100 00 00122
Q ss_pred eEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCCCCCCccccccc
Q 004068 445 MEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGASGPSLLINGVK 523 (775)
Q Consensus 445 ~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~~~~~~~~~v~ 523 (775)
..+|++|+++++|+ ||||+|.+|+||||++..... +.+ ||||++.++++++++++.+. ......+.
T Consensus 159 ~~~i~~d~~~~~G~SGGPl~~~~G~vVGI~s~~~~~---------g~~--~aip~~~i~~~l~~~~~~~~--~~g~~~~~ 225 (325)
T 1lcy_A 159 VEYIQTDAAIDFGNAGGPLVNLDGEVIGVNTMKVTA---------GIS--FAIPSDRLREFLHRGEKKNS--SSGISGSQ 225 (325)
T ss_dssp CCCEEESSCCSTTTTTSEEEETTSCEEEEEEEEEET---------TEE--EEEEHHHHHHHTCC----------------
T ss_pred CCEEEEcCCCCCCCccccEECCCCEEEEEEeEeecC---------Cee--EEEEHHHHHHHHHHhhhccc--cccccccc
Confidence 46899999999987 999999999999998754322 344 58999999999999876421 00001244
Q ss_pred cCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhh
Q 004068 524 RPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHD 602 (775)
Q Consensus 524 r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~d 602 (775)
|+ |||+.+..++...++.+|++.. ..++...+++|..|.++|||+++ |++||+|++|||++|.++.+
T Consensus 226 r~-----~lGv~~~~l~~~~~~~~~l~~~-------~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~ 293 (325)
T 1lcy_A 226 RR-----YIGVMMLTLSPSILAELQLREP-------SFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED 293 (325)
T ss_dssp -E-----ECCEEEEECCHHHHHHHTTSCT-------TSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH
T ss_pred cc-----ccceEeecCCHHHHHhhCcccc-------ccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHH
Confidence 45 9999999998888888887642 12334467889999999999996 99999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEec
Q 004068 603 IENACQALDKDGEDNGKLDITIFRQGREIELQVGTD 638 (775)
Q Consensus 603 l~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~ 638 (775)
+..++. .++++.++|.|+|+.+++.+.+.
T Consensus 294 l~~~l~-------~~~~v~l~v~R~g~~~~~~v~~~ 322 (325)
T 1lcy_A 294 VYEAVR-------TQSQLAVQIRRGRETLTLYVTPE 322 (325)
T ss_dssp HHHHHT-------TCSSEEEEEEETTEEEEEEECCE
T ss_pred HHHHHh-------CCCeEEEEEEECCEEEEEEEEEe
Confidence 998883 25789999999999999888764
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1.4e-35 Score=323.30 Aligned_cols=303 Identities=20% Similarity=0.204 Sum_probs=149.3
Q ss_pred hhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe
Q 004068 286 FAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH 365 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d 365 (775)
.+++++.+|+|.|.+..+ ..+++.......||||||+ ++|+||||+|+| .+...+.|++.+ +..++|++++.|
T Consensus 18 ~~~~~~~~sVV~I~~~~~--~~~~~~~~~~~~GSG~iI~---~~G~ILTaaHvv-~~~~~i~V~~~~-g~~~~a~~~~~d 90 (332)
T 3num_A 18 DVVEKIAPAVVHIELFRK--LPFSKREVPVASGSGFIVS---EDGLIVTNAHVV-TNKHRVKVELKN-GATYEAKIKDVD 90 (332)
T ss_dssp HHHHHHGGGEEEEEEEEE--CTTSSCEEEEEEEEEEEEE---TTTEEEECTTTC-CTTSEEEEEETT-SCEEEEEEEEEE
T ss_pred HHHHHhcCcEEEEEEEec--cccCCCcceeeeEEEEEEe---CCCEEEEChHHc-CCCCEEEEEECC-CCEEEEEEEEec
Confidence 388999999999999776 3556655667899999999 578999998765 567889999998 999999999999
Q ss_pred CCCcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccc
Q 004068 366 PVHNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMN 444 (775)
Q Consensus 366 p~~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n 444 (775)
+..||||||++.. .++ ++.|+++..++.|+.|+++|+|.+...+.+.|+|+....... .+.|+...
T Consensus 91 ~~~DlAlL~l~~~~~~~--------~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~-----~~~~~~~~ 157 (332)
T 3num_A 91 EKADIALIKIDHQGKLP--------VLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGK-----ELGLRNSD 157 (332)
T ss_dssp TTTTEEEEEECCSSCCC--------CCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC------------------
T ss_pred CCCCeEEEEEcCCCCCc--------eeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeeccccc-----ccCcCCCc
Confidence 9999999999753 444 378887777999999999999999988899999986532111 12233333
Q ss_pred eEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCCCCCCccccccc
Q 004068 445 MEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGASGPSLLINGVK 523 (775)
Q Consensus 445 ~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~~~~~~~~~v~ 523 (775)
.++|++|+.+++|+ ||||+|.+|+||||++....+ +.+ ||||++.++++++++.+.... ....+.
T Consensus 158 ~~~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~---------g~~--~aip~~~i~~~l~~~~~~~~~---g~~~~~ 223 (332)
T 3num_A 158 MDYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVTA---------GIS--FAIPSDKIKKFLTESHDRQAK---GKAITK 223 (332)
T ss_dssp -CCEEESSCCCTTTTTSEEEETTSCEEEEEEEEEET---------TEE--EEEEHHHHHHHHHHHCC-------------
T ss_pred CCEEEEECCcCCCCcHHHhhCCCCcEEEEEeeEecc---------cce--EEECHHHHHHHHHHHhhhhcc---Cccccc
Confidence 57899999999987 999999999999999754432 344 599999999999998642100 000133
Q ss_pred cCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhh
Q 004068 524 RPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHD 602 (775)
Q Consensus 524 r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~d 602 (775)
|+ |||+.+..++...++.++.... ..+....+++|..|.++|||+++ |++||+|++|||++|.++.+
T Consensus 224 r~-----~lGi~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~ 291 (332)
T 3num_A 224 KK-----YIGIRMMSLTSSKAKELKDRHR-------DFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSAND 291 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc-----ccceEEEecCHHHhhhhhhhcc-------ccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHH
Confidence 45 9999998887766655543211 12233456779999999999986 99999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccC
Q 004068 603 IENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRD 641 (775)
Q Consensus 603 l~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~ 641 (775)
+..++. .++++.++|.|+|+++++++++....
T Consensus 292 ~~~~l~-------~~~~v~l~v~R~g~~~~~~v~p~~~~ 323 (332)
T 3num_A 292 VSDVIK-------RESTLNMVVRRGNEDIMITVIPEEID 323 (332)
T ss_dssp ---------------------------------------
T ss_pred HHHHHh-------CCCeEEEEEEECCEEEEEEEEEeeec
Confidence 988873 25779999999999999988876553
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=99.92 E-value=4.3e-25 Score=229.83 Aligned_cols=211 Identities=18% Similarity=0.242 Sum_probs=153.6
Q ss_pred hhhhhhcCcEEEEEEeecCcc-------------ccCCc----ccc-ceeEEEEEEEecCCceEEEEecceeccCCceEE
Q 004068 286 FAESVIEPTLVMFEVHVPPSC-------------MIDGV----HSQ-HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVM 347 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~-------------~~Dg~----~~~-~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~ 347 (775)
.+++++.||+|.|.+...... .++.. ... ...||||||+ ++||||||+|+| .++..+.
T Consensus 8 ~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~---~~g~ILTnaHvv-~~~~~i~ 83 (239)
T 1l1j_A 8 NVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFD---PEGYILTNYHVV-GGADNIT 83 (239)
T ss_dssp HHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEE---TTTEEEEEHHHH-SSCSSCE
T ss_pred HHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEe---CCCEEEEChHHh-CCCCEEE
Confidence 388999999999998654210 01110 112 5789999999 568999997765 5677899
Q ss_pred EEEcCCCeEEeEEEEEEeCCCcEEEEEeCC--CCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeC
Q 004068 348 LSFAAFPIEIPGEVVFLHPVHNFALIAYDP--SSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTN 425 (775)
Q Consensus 348 Vt~~d~~~~~~A~Vv~~dp~~DlAILk~d~--~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~ 425 (775)
|++.+ +..++|++++.|+.+||||||++. ..++ +++|+++..++.|+.|+++|+|.+...+.+.|+|+.
T Consensus 84 V~~~~-g~~~~a~vv~~d~~~DlAllkl~~~~~~~~--------~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~ 154 (239)
T 1l1j_A 84 VTMLD-GSKYDAEYIGGDEELDIAVIKIKASDKKFP--------YLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSA 154 (239)
T ss_dssp EECTT-SCEEEBCCCEEETTTTEEEEEBCCSSSCCC--------CCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEE
T ss_pred EEECC-CCEEEEEEEEEcCCCCEEEEEEcCCCCCCc--------eEEecCccCCccccEEEEEECCCCCCCcEEEEEEec
Confidence 99998 899999999999999999999986 3444 489988766899999999999999888889999996
Q ss_pred CccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhH
Q 004068 426 PCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRV 504 (775)
Q Consensus 426 ~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~v 504 (775)
....+..... ...| ..+|++|+++++|+ ||||+|.+|+||||++..... ....+.+ ||||++.++++
T Consensus 155 ~~r~~~~~~~-~~~~----~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~-----~~~~g~~--faIP~~~~~~~ 222 (239)
T 1l1j_A 155 TNRRIPKPDG-SGYY----VGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNP-----QEAVNLG--FAIPINTVKKF 222 (239)
T ss_dssp EEEEEECTTS-SCEE----EEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCC-----CSCCSCE--EEEEHHHHHHH
T ss_pred cccccccCCC-cccc----CCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecC-----CCcCceE--EEEEHHHHHHH
Confidence 5433221110 0012 37899999999987 999999999999999854332 1123455 58999999999
Q ss_pred HHHHHcCCCCCCccccccccCCCcceEEEE
Q 004068 505 LDKIISGASGPSLLINGVKRPMPLVRILEV 534 (775)
Q Consensus 505 l~~l~~g~~~~~~~~~~v~r~~p~~~~Lgv 534 (775)
+++|+++|+ +.|+ |||+
T Consensus 223 ~~~l~~~g~--------v~r~-----~lGv 239 (239)
T 1l1j_A 223 LDTILTQKK--------VEKA-----YLGV 239 (239)
T ss_dssp HGGGCC------------------------
T ss_pred HHHHHHCCC--------Cccc-----eeCc
Confidence 999998764 5666 8875
No 12
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.92 E-value=2.9e-24 Score=223.08 Aligned_cols=206 Identities=15% Similarity=0.199 Sum_probs=159.1
Q ss_pred hhhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEE
Q 004068 285 SFAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFL 364 (775)
Q Consensus 285 ~~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~ 364 (775)
..+++++.+|+|.|.+..+. ............||||+|+ ++|+||||+|+| .+...+.|++.+ +..++|++++.
T Consensus 23 ~~~~~~~~~sVV~I~~~~~~-~~~~~~~~~~~~GsG~ii~---~~G~IlTaaHvv-~~~~~~~V~~~~-g~~~~a~vv~~ 96 (237)
T 3lgi_A 23 NLAVRRAAPAVVNVYNRGLN-TNSHNQLEIRTLGSGVIMD---QRGYIITNKHVI-NDADQIIVALQD-GRVFEALLVGS 96 (237)
T ss_dssp HHHHHHHGGGEEEEEEECCT-TTCTTSCCEEEEEEEEEEE---TTTEEEEEHHHH-TTCSEEEEECTT-SCEEEEEEEEE
T ss_pred HHHHHHhCCcEEEEEEEecc-cCcccccccceEEEEEEEe---CCCEEEEeeeec-CCCCEEEEEeCC-CCEEEEEEEEE
Confidence 34889999999999987763 1111222345789999999 578999997655 577889999997 99999999999
Q ss_pred eCCCcEEEEEeCCCC-CCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCccccccc
Q 004068 365 HPVHNFALIAYDPSS-LGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAM 443 (775)
Q Consensus 365 dp~~DlAILk~d~~~-l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~ 443 (775)
|+..||||||++... +++ ++|+++..++.|+.|+++|+|.+...+.+.|+|+...... .... .
T Consensus 97 d~~~DlAll~l~~~~~~~~--------~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~-~~~~-------~ 160 (237)
T 3lgi_A 97 DSLTDLAVLKINATGGLPT--------IPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIG-LNPT-------G 160 (237)
T ss_dssp ETTTTEEEEECCCSSCCCC--------CCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSS-CCTT-------S
T ss_pred cCCCCEEEEEecCCCCCce--------EeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEeccccc-ccCC-------C
Confidence 999999999998643 443 7888776789999999999999998999999999643111 1111 1
Q ss_pred ceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCCCCC
Q 004068 444 NMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGASGP 515 (775)
Q Consensus 444 n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~~~ 515 (775)
..++|++|+.+.+|+ ||||+|.+|+||||++....... .+....+ +.||||++.+++++++|++.|+.+
T Consensus 161 ~~~~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~-~~~~~~g--~~~aip~~~i~~~~~~l~~~g~~~ 230 (237)
T 3lgi_A 161 RQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSN-DGETPEG--IGFAIPFQLATKIMDKLIRDGRVI 230 (237)
T ss_dssp CSCCEEECSCCCTTCTTCEEECTTCCEEEEECCCCCCCT-TSCCCCS--CEEEEEHHHHHHHHHHHHHHSSCC
T ss_pred cCCEEEEcCccCCCCchHHeeCCCCeEEEEEeeeeccCC-CCcCcCc--eEEEEEHHHHHHHHHHHHHcCCCC
Confidence 136789999999987 99999999999999986544310 0011233 445999999999999999887643
No 13
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=99.92 E-value=4.2e-25 Score=230.59 Aligned_cols=202 Identities=19% Similarity=0.214 Sum_probs=145.6
Q ss_pred hhhhhhcCcEEEEEEeecCc----------cccCCc------cccceeEEEEEEEecCCceEEEEecceeccCCceEEEE
Q 004068 286 FAESVIEPTLVMFEVHVPPS----------CMIDGV------HSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLS 349 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~----------~~~Dg~------~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt 349 (775)
.+++++.+|||.|.+..... ..++.. ....+.||||||+. ++||||||+|+| .++..+.|+
T Consensus 17 ~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~--~~G~IlTnaHvv-~~a~~i~V~ 93 (245)
T 3sti_A 17 PMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINA--SKGYVLTNNHVI-NQAQKISIQ 93 (245)
T ss_dssp HHHHHHGGGEEEC----------------------------------CCEEEEEET--TTTEEEECGGGC-----CEEEE
T ss_pred HHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeC--CCCEEEEcHHHh-CCCCEEEEE
Confidence 48999999999998765320 011110 11257899999992 349999997655 567789999
Q ss_pred EcCCCeEEeEEEEEEeCCCcEEEEEeC-CCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCcc
Q 004068 350 FAAFPIEIPGEVVFLHPVHNFALIAYD-PSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCA 428 (775)
Q Consensus 350 ~~d~~~~~~A~Vv~~dp~~DlAILk~d-~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~ 428 (775)
+.+ +..++|++++.|+..||||||++ +..+++ ++|+++..++.||.|+++|+|.+...+.+.|+|+....
T Consensus 94 ~~d-g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~--------~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~ 164 (245)
T 3sti_A 94 LND-GREFDAKLIGSDDQSDIALLQIQNPSKLTQ--------IAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGR 164 (245)
T ss_dssp CTT-SCEEEEEEEEEETTTTEEEEEESSCCSCCC--------CCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSS
T ss_pred ECC-CCEEEEEEEEecCCCCEEEEEeccCCCCce--------eeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeecc
Confidence 998 99999999999999999999996 444543 88988777999999999999999999999999997532
Q ss_pred ccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHH
Q 004068 429 ALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDK 507 (775)
Q Consensus 429 ~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~ 507 (775)
. .... ..| .++|++|+.+++|+ ||||+|.+|+||||++...... ....+.+ ||||++.+++++++
T Consensus 165 ~-~~~~---~~~----~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~----~~~~g~~--faIP~~~~~~~~~~ 230 (245)
T 3sti_A 165 S-GLNL---EGL----ENFIQTDASINRGNSGGALLNLNGELIGINTAILAPG----GGSVGIG--FAIPSNMARTLAQQ 230 (245)
T ss_dssp C-SSCC---TTC----SSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC----------CCCE--EEEEHHHHHHHHHH
T ss_pred c-ccCC---CCc----cCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCC----CCcceEE--EEEeHHHHHHHHHH
Confidence 2 1111 112 36799999999987 9999999999999998654431 1123444 59999999999999
Q ss_pred HHcCCC
Q 004068 508 IISGAS 513 (775)
Q Consensus 508 l~~g~~ 513 (775)
|++.|+
T Consensus 231 l~~~g~ 236 (245)
T 3sti_A 231 LIDFGE 236 (245)
T ss_dssp HHHHHH
T ss_pred HHHcCC
Confidence 998764
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.91 E-value=1.6e-23 Score=216.92 Aligned_cols=194 Identities=22% Similarity=0.202 Sum_probs=150.9
Q ss_pred hhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe
Q 004068 286 FAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH 365 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d 365 (775)
.+++++.+|+|.|.+.... .+++.......||||+|+ ++|+||||+|+| .+...+.|++.+ +..++|++++.|
T Consensus 35 ~~~~~~~~sVV~I~~~~~~--~~~~~~~~~~~GSG~iI~---~~G~VLTaaHvv-~~~~~i~V~~~~-g~~~~a~v~~~d 107 (231)
T 3tjo_A 35 DVVEKIAPAVVHIELFRKL--PFSKREVPVASGSGFIVS---EDGLIVTNAHVV-TNKHRVKVELKN-GATYEAKIKDVD 107 (231)
T ss_dssp HHHHHHGGGEEEEEEEEEC--TTSSCEEEEEEEEEEECS---TTCEEEEETTTC-CSSSEEEEECTT-SCEEEEEEEEEE
T ss_pred HHHHHhcCcEEEEEEEecc--ccCCCccccceEEEEEEe---CCCEEEEchhcc-cCCceEEEEcCC-CCEEEEEEEEec
Confidence 4889999999999987652 333333344789999999 578999998765 567889999997 999999999999
Q ss_pred CCCcEEEEEeCC-CCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccc
Q 004068 366 PVHNFALIAYDP-SSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMN 444 (775)
Q Consensus 366 p~~DlAILk~d~-~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n 444 (775)
+..||||||++. ..++ ++.|+++..++.|+.|+++|+|.++..+.+.|+|+........ ..+....
T Consensus 108 ~~~DlAlL~l~~~~~~~--------~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~-----~~~~~~~ 174 (231)
T 3tjo_A 108 EKADIALIKIDHQGKLP--------VLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKE-----LGLRNSD 174 (231)
T ss_dssp TTTTEEEEECCCSSCCC--------CCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-----------------
T ss_pred CCCCEEEEEecCCCCCC--------ceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccc-----cccCCCc
Confidence 999999999984 3444 3788777678999999999999998888889999865321111 1121223
Q ss_pred eEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHc
Q 004068 445 MEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIIS 510 (775)
Q Consensus 445 ~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~ 510 (775)
..+|++|+.+++|+ ||||+|.+|+||||++..... +.+ ||||++.++++|+++++
T Consensus 175 ~~~i~~da~i~~G~SGGPLv~~~G~vVGI~s~~~~~---------g~~--~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 175 MDYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVTA---------GIS--FAIPSDKIKKFLTESHD 230 (231)
T ss_dssp -CCEEESSCCCTTTTTSEEECTTSCEEEEEEEEEET---------TEE--EEEEHHHHHHHHHHHHT
T ss_pred ccEEEEcCCcCCCCchhHeecCCCeEEEEEeEEecC---------CeE--EEEEHHHHHHHHHHHhh
Confidence 46889999999987 999999999999998754322 344 59999999999999876
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.86 E-value=1.5e-20 Score=194.85 Aligned_cols=192 Identities=16% Similarity=0.170 Sum_probs=148.7
Q ss_pred hhhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEE
Q 004068 285 SFAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFL 364 (775)
Q Consensus 285 ~~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~ 364 (775)
...++++.+|+|+|....+. ......||||+|+ +++|||++|+| .+...+.|.+.+ ..+++++++.
T Consensus 34 ~~~~~~~~~svV~I~~~~~~-------~~~~~~GsG~iI~----~~~VlTaaH~v-~~~~~~~V~~~~--~~~~~~~v~~ 99 (237)
T 3k6y_A 34 NPVVAATEPSVVKIRSLAPR-------CQKVLEGTGFVIS----PDRVMTNAHVV-AGSNNVTVYAGD--KPFEATVVSY 99 (237)
T ss_dssp CHHHHHHGGGEEEEEEEEGG-------GTEEEEEEEEEEE----TTEEEECGGGT-TTCSEEEEEETT--EEEECEEEEE
T ss_pred HHHHHHhcCCEEEEEEEecC-------CCcceeEEEEEEE----CCEEEECHHHc-CCCceEEEEECC--cEEEEEEEEE
Confidence 34789999999999886652 1345789999999 68999998765 567789999986 5899999999
Q ss_pred eCCCcEEEEEeCCCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccc--
Q 004068 365 HPVHNFALIAYDPSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRA-- 442 (775)
Q Consensus 365 dp~~DlAILk~d~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra-- 442 (775)
|+..||||||++...++ +++|+ +..++.|+.|+++|+|.+...+.+.+.++......... .|..
T Consensus 100 ~~~~DiAll~l~~~~~~--------~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~-----~~~~~~ 165 (237)
T 3k6y_A 100 DPSVDVAILAVPHLPPP--------PLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPD-----IYGDPE 165 (237)
T ss_dssp ETTTTEEEEECTTCCSC--------CCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECC-----TTCCSS
T ss_pred cCCCCEEEEEeCCCCCC--------ceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccc-----cccCCC
Confidence 99999999999855444 37787 44589999999999999888888888887542111111 1111
Q ss_pred -cceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCCC
Q 004068 443 -MNMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGAS 513 (775)
Q Consensus 443 -~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~~ 513 (775)
....++++|+.+.+|+ ||||+|.+|+||||++..... ..+. .+|||++.++++++++.++.+
T Consensus 166 ~~~~~~~~~~~~~~~GdSGGPLv~~~G~vvGI~s~~~~~-------~~~~--~~aip~~~v~~~l~~~~~~~~ 229 (237)
T 3k6y_A 166 PVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAID-------DAET--GFVLTAGEVAGQLAKIGATQP 229 (237)
T ss_dssp CEEEEEEEEESCCCTTCTTCEEECTTSCEEEEEEEECSS-------STTE--EEEEEHHHHHGGGGGTTCCSC
T ss_pred cccccEEEecCccCCCccHHHEECCCCEEEEEEEeeccC-------CCcE--EEEEEHHHHHHHHHHccCCCC
Confidence 2346899999998887 999999999999998754432 2344 459999999999999976643
No 16
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.80 E-value=7.2e-19 Score=179.14 Aligned_cols=167 Identities=11% Similarity=0.022 Sum_probs=129.4
Q ss_pred CccceEEEEEEcCCChHhhh-ccCC-CEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEeccc
Q 004068 563 VRRQVLRVKGCLAGSKAENM-LEQG-DMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVR 640 (775)
Q Consensus 563 ~~~q~l~V~~V~~gSpA~~a-Lq~G-DiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~ 640 (775)
...++++|..|.++|||+++ |+.| |+|++|||++|.+|.++...+.... .++++.++|.|+++...+++.+...
T Consensus 13 ~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~----~g~~v~l~v~R~~~~~~~~v~l~p~ 88 (209)
T 3rle_A 13 GGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKAN----VEKPVKMLIYSSKTLELRETSVTPS 88 (209)
T ss_dssp SSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHT----TTSCEEEEEEETTTCCEEEEEECCC
T ss_pred CCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcC----CCCEEEEEEEecCCceEEEEEEccc
Confidence 34578889999999999996 9999 9999999999999999887665444 3788999999976444444444322
Q ss_pred CCCCcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCC-CCEEEEECCeeCCCHHHHHHHHHhc
Q 004068 641 DGNGTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYA-LQWIVEINGKRTPDLEAFVNVTKEI 719 (775)
Q Consensus 641 ~~~~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~-GD~I~~VNG~pV~dl~~f~~~v~~i 719 (775)
.. .....++|+.++........ ..|++|..|.++|||+++||++ ||+|++|||+ +.++++|.++++..
T Consensus 89 ~~---~~~~~~lGi~~~~~~~~~~~-------~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~ 157 (209)
T 3rle_A 89 NL---WGGQGLLGVSIRFCSFDGAN-------ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIETH 157 (209)
T ss_dssp SS---SSSSSSSCEEEEEEECTTGG-------GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHHT
T ss_pred cc---ccccCccceEEeecChhHcc-------ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHhC
Confidence 11 01234678777653322111 1399999999999999999999 9999999998 99999999999996
Q ss_pred CCCCEEEEEEEEeCC--eEEEEEEEeCCC
Q 004068 720 EHGEFVRVRTVHLNG--KPRVLTLKQDLH 746 (775)
Q Consensus 720 ~~g~~V~L~~V~Rdg--~~~~ltlk~d~~ 746 (775)
+|+.+.|+ +.|++ +.+.++++++.+
T Consensus 158 -~g~~v~l~-v~r~~~~~~~~v~l~p~~~ 184 (209)
T 3rle_A 158 -EAKPLKLY-VYNTDTDNCREVIITPNSA 184 (209)
T ss_dssp -TTSCEEEE-EEETTTTEEEEEEECCCTT
T ss_pred -CCCeEEEE-EEECCceEEEEEEEEecCC
Confidence 78999999 55643 568889988754
No 17
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.73 E-value=1e-16 Score=159.98 Aligned_cols=153 Identities=16% Similarity=0.184 Sum_probs=116.9
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecC--eEEEEEEEeccc
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQG--REIELQVGTDVR 640 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~G--k~~~l~V~l~~~ 640 (775)
..+++|..|.++|||++ + |+.||+|++|||+++.+|.++........ .++.+.++|.|++ .+..+.+.+...
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~----~g~~v~l~v~r~~~~~~~~~~v~l~~~ 109 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE----AGSIVRLYVMRRKPPAEKVMEIKLIKG 109 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT----SCSEEEEEEEEECCCCEEEEEEEEEEB
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh----CCCcEEEEEEecCCCccccEEEEEecC
Confidence 35677999999999998 6 99999999999999999987766554333 3688999999987 455566665543
Q ss_pred CCCCcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHH
Q 004068 641 DGNGTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTK 717 (775)
Q Consensus 641 ~~~~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~ 717 (775)
.. -+|+.+..... ....+ ...|++|..|.+||||+++| |++||+|++|||+++.+ ++++.+.++
T Consensus 110 ~~--------~lG~~~~~~~~----~~~~~-~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 176 (196)
T 3gsl_A 110 PK--------GLGFSIAGGVG----NQHIP-GDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK 176 (196)
T ss_dssp TT--------BSCEEEEESBT----SCSBT-TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHH
T ss_pred CC--------CceEEEEccCC----CcCCC-CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHH
Confidence 31 23444432210 00011 12489999999999999999 99999999999999999 999999998
Q ss_pred hcCCCCEEEEEEEEeCCeEE
Q 004068 718 EIEHGEFVRVRTVHLNGKPR 737 (775)
Q Consensus 718 ~i~~g~~V~L~~V~Rdg~~~ 737 (775)
+ .++.+.|+ +.|++...
T Consensus 177 ~--~~~~v~l~-v~R~~~~~ 193 (196)
T 3gsl_A 177 N--TYDVVYLK-VAKPSNAE 193 (196)
T ss_dssp S--CCEEEEEE-EEEESCCC
T ss_pred c--CCCeEEEE-EeCCCCcc
Confidence 6 47889998 67777643
No 18
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.68 E-value=5.7e-16 Score=151.64 Aligned_cols=127 Identities=14% Similarity=0.105 Sum_probs=94.7
Q ss_pred cceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEeCCCcEEEEEeCCCCCCcccccceeeeee
Q 004068 314 QHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLHPVHNFALIAYDPSSLGVAGASVVRAAEL 393 (775)
Q Consensus 314 ~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~dp~~DlAILk~d~~~l~~~~~~~v~~~~l 393 (775)
....||||+| +||||||+|+| .++..+.|++ + +..++|+++ .|+..||||||++...++ +.+++|
T Consensus 19 ~~~~GSGfii-----~g~IlTn~HVV-~~~~~i~V~~-d-g~~~~a~vv-~d~~~DlAlLkv~~~~~~------~~~l~l 83 (163)
T 2w5e_A 19 PEGKGTGFFS-----GNDIVTAAHVV-GNNTFVNVCY-E-GLMYEAKVR-YMPEKDIAFITCPGDLHP------TARLKL 83 (163)
T ss_dssp TTEEEEEEEE-----TTEEEEEHHHH-TTCSEEEEEE-T-TEEEEEEEE-ECCSSSEEEEECCTTCCC------SCCCCB
T ss_pred CceeEEEEEE-----CCEEEecHHHh-CCCceEEEEE-C-CEEEEEEEE-EECCCCEEEEEecCCCCC------cceEEc
Confidence 4578999999 36999997654 6778899999 6 899999999 899999999999875443 234678
Q ss_pred CCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEEE
Q 004068 394 LPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAI 472 (775)
Q Consensus 394 g~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI 472 (775)
+++. ..+.|+++|+|.+. ...+.+ . .... -..++.++++++|+ ||||+|.+|+||||
T Consensus 84 ~~~~---~~~~v~~~G~p~~~-~~~s~~--~----~~~~------------g~~~~~~a~i~pGnSGGPl~n~~G~VVGI 141 (163)
T 2w5e_A 84 SKNP---DYSCVTVMAYVNED-LVVSTA--A----AMVY------------GNTLSYAVRTQDGMSGAPVCDKYCRVLAV 141 (163)
T ss_dssp CSSC---CTTEEEEEEEETTE-EEEEEE--E----EEEE------------TTEEEEECSCSSCCTTCEEECTTSCEEEE
T ss_pred CCCC---CCCEEEEEEeCCCC-EEEEEe--c----cEEc------------CCeEEEEEEeCCCCchhhEEcCCCEEEEE
Confidence 8765 24899999999652 211110 0 0000 02356678999997 99999999999999
Q ss_pred eeeec
Q 004068 473 WGSFS 477 (775)
Q Consensus 473 ~~~~~ 477 (775)
+.+..
T Consensus 142 ~~~~~ 146 (163)
T 2w5e_A 142 HQTNT 146 (163)
T ss_dssp EEEEE
T ss_pred EccCc
Confidence 87533
No 19
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.68 E-value=4e-16 Score=156.92 Aligned_cols=147 Identities=20% Similarity=0.242 Sum_probs=115.6
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEE------EEEE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGREI------ELQV 635 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~------~l~V 635 (775)
.+.+|..|.++|||++ + |+.||+|++|||+++. +|.++..++.... .++++.++|.|+++.. ...+
T Consensus 36 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~~~~~~~~~~~~~~v 111 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS----ITSKVTLEIEFDVAESVIPSSGTFHV 111 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC----SSSEEEEEEEECSCSCCBCCSSCEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC----CCCeEEEEEEecCCCCCCCCCCcEEE
Confidence 4466999999999998 6 9999999999999999 6899998886543 2678999999998532 1222
Q ss_pred EecccCCCCcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHH
Q 004068 636 GTDVRDGNGTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAF 712 (775)
Q Consensus 636 ~l~~~~~~~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f 712 (775)
.+... ....+|+.+..+.... ...|++|..|.++|||+++| |++||+|++|||+++.+ +++|
T Consensus 112 ~l~~~-------~~~~lG~~~~~~~~~~--------~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~ 176 (196)
T 1p1d_A 112 KLPKK-------HSVELGITISSPSSRK--------PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDA 176 (196)
T ss_dssp EECCC-------SSCCCCCEEECSCSSS--------TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHH
T ss_pred EecCC-------CCCCcCEEEECCCCCC--------CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 22211 1123577776654210 12489999999999999999 99999999999999999 9999
Q ss_pred HHHHHhcCCCCEEEEEEEEeCC
Q 004068 713 VNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 713 ~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.+++++. ++.+.|+ +.|++
T Consensus 177 ~~~l~~~--~~~v~l~-v~R~~ 195 (196)
T 1p1d_A 177 VQILQQC--EDLVKLK-IRKDE 195 (196)
T ss_dssp HHHHHHC--TTCEEEE-EECCC
T ss_pred HHHHHhC--CCEEEEE-EEeCC
Confidence 9999984 8899998 67765
No 20
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.66 E-value=2.5e-15 Score=151.44 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=112.6
Q ss_pred ceEEEEEEcCCChHhhh--ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE----------E
Q 004068 566 QVLRVKGCLAGSKAENM--LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE----------I 631 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a--Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~----------~ 631 (775)
.+++|..|.++|||+++ |+.||+|++|||+++.++ .++..++. . .++++.++|.|+++. .
T Consensus 33 ~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~~~~~~~~g~~~~~~ 106 (200)
T 2qt5_A 33 GKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLK--N----VGERVVLEVEYELPPVSIQGSSVMFR 106 (200)
T ss_dssp SCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHH--T----CCSEEEEEEEEECCCCCCCCSSEEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--h----CCCeEEEEEeccCCCcccCCCcccee
Confidence 34569999999999974 999999999999999999 77775553 2 267899999997742 5
Q ss_pred EEEEEecccCCCCcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--C
Q 004068 632 ELQVGTDVRDGNGTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--D 708 (775)
Q Consensus 632 ~l~V~l~~~~~~~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--d 708 (775)
.+.+.+.... ..+|+.+...... . .+ ...+++|..|.++|||+++| |++||+|++|||+++. +
T Consensus 107 ~~~v~l~~~~--------~~lG~~l~~g~~~---~--~~-~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~ 172 (200)
T 2qt5_A 107 TVEVTLHKEG--------NTFGFVIRGGAHD---D--RN-KSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTT 172 (200)
T ss_dssp EEEEEEECBT--------TBCSEEEEEECCS---S--TT-TCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC
T ss_pred EEEEEEecCC--------CCeEEEEECCCCC---C--cc-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 5555554211 1234443311000 0 01 12489999999999999999 9999999999999999 9
Q ss_pred HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 709 LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 709 l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
++++.+.++. .++.++|. +.|+++.
T Consensus 173 ~~~~~~~l~~--~~~~v~l~-v~R~~~~ 197 (200)
T 2qt5_A 173 HAEAMSILKQ--CGQEATLL-IEYDVSV 197 (200)
T ss_dssp HHHHHHHHHT--TCSEEEEE-EEEEEEC
T ss_pred HHHHHHHHHc--CCCeEEEE-EEECCcc
Confidence 9999999998 58999999 6887764
No 21
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.63 E-value=3.5e-15 Score=150.68 Aligned_cols=138 Identities=15% Similarity=0.121 Sum_probs=104.6
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC----hhhHHHHHHhcCCCCCCCCe-EEEEEEecCeEE--EEEEE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC----FHDIENACQALDKDGEDNGK-LDITIFRQGREI--ELQVG 636 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s----~~dl~~~l~~~~~~~~~g~~-v~l~V~R~Gk~~--~l~V~ 636 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.+ +.++..++. . .++. +.++|.|+++.. .+++.
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~--~----~~~~~v~l~v~R~~~~~~~~~~v~ 118 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFH--T----TYEKAVTLTVFRADPPELEKFNVD 118 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHH--S----CCSSEEEEEEECCSSCCEEEEEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHH--h----cCCCceEEEEEecccCCCcEEEEE
Confidence 4577999999999998 5 99999999999999999 444444442 2 2445 999999988654 34444
Q ss_pred ecccCCCCcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHH
Q 004068 637 TDVRDGNGTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFV 713 (775)
Q Consensus 637 l~~~~~~~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~ 713 (775)
+.... ...+|+.+... ..|++|..|.+||||+++| |++||+|++|||+++.++ +++.
T Consensus 119 l~~~~-------~~~lG~~~~~~-------------~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~ 178 (206)
T 3r0h_A 119 LMKKA-------GKELGLSLSPN-------------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCY 178 (206)
T ss_dssp EECCT-------TCCCCEEEEEC-------------SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHH
T ss_pred EecCC-------CCccCeEEEcC-------------CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 43221 11245555422 1389999999999999999 999999999999999965 7888
Q ss_pred HHHHhcCCCCEEEEEEEEe
Q 004068 714 NVTKEIEHGEFVRVRTVHL 732 (775)
Q Consensus 714 ~~v~~i~~g~~V~L~~V~R 732 (775)
+.++. .++.+.|++ .|
T Consensus 179 ~~l~~--~~~~v~L~V-~R 194 (206)
T 3r0h_A 179 ALFKG--ANGKVSMEV-TR 194 (206)
T ss_dssp HHHHT--CCSEEEEEE-EE
T ss_pred HHHHc--CCCeEEEEE-Ee
Confidence 88876 467899884 44
No 22
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.62 E-value=9e-16 Score=150.33 Aligned_cols=115 Identities=24% Similarity=0.265 Sum_probs=90.9
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhh-HHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccCCC
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHD-IENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRDGN 643 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~d-l~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~~~ 643 (775)
.+++|..|.++|||+++ |+.||+|++|||+++.+|.+ +...+.... .++++.++|.|++++++++++...
T Consensus 27 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~----~~~~v~l~vr~~~~~~~v~l~~~~---- 98 (166)
T 1w9e_A 27 NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA----FGEKITMTIRDRPFERTITMHKDS---- 98 (166)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHC----CSSEEEEEEECCTTCEEEEEECCT----
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC----CCCEEEEEEEcCCCcEEEEEecCC----
Confidence 45679999999999995 99999999999999999988 665543333 257899999554488777776421
Q ss_pred CcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHH
Q 004068 644 GTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLE 710 (775)
Q Consensus 644 ~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~ 710 (775)
...+|+.+. . | +|..+.++|||+++||++||+|++|||+++.++.
T Consensus 99 -----~~~lG~~~~-------------~---g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~ 143 (166)
T 1w9e_A 99 -----TGHVGFIFK-------------N---G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLK 143 (166)
T ss_dssp -----TSCCSEEEE-------------T---T-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCC
T ss_pred -----CCcEeEEEe-------------C---C-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 112355443 1 5 8999999999999999999999999999999883
No 23
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.59 E-value=1.7e-15 Score=143.44 Aligned_cols=122 Identities=17% Similarity=0.301 Sum_probs=102.1
Q ss_pred CceeeeccccchhhhHHHHHHcCCCCCCccccccccCCCcceEEEEEEEEcCh---hhhhhcCCChhHHhhhhhcCCCcc
Q 004068 489 DHQFVRGIPIYTISRVLDKIISGASGPSLLINGVKRPMPLVRILEVELYPTLL---SKARSFGLSDDWVQALVKKDPVRR 565 (775)
Q Consensus 489 ~~~f~~aIPi~~i~~vl~~l~~g~~~~~~~~~~v~r~~p~~~~Lgve~~~i~~---~~ar~lGls~~wi~~v~~~~~~~~ 565 (775)
+++| |||++.+++++++|+++|+ +.|+ |||+.+++++. ..++.+|++.. ..
T Consensus 3 GigF--AIP~~~~~~v~~~L~~~G~--------v~r~-----~LGv~~~~~~~~~~~~~~~lgl~~~-----------~~ 56 (134)
T 2l97_A 3 GLGF--AIPANDAINIIEQLEKNGK--------VTRP-----ALGIQMVNLSNVSTSDIRRLNIPSN-----------VT 56 (134)
T ss_dssp CCCC--CCCCCCCCCCCCCCCCCCC--------SSCC-----CCCCEEEESSSSCHHHHHHHSSCSS-----------SC
T ss_pred cEEE--EeEHHHHHHHHHHHHHcCC--------Eeee-----EeeEEEEECCchhHHHHHHcCCCcC-----------CC
Confidence 4555 9999999999999998764 5566 99999998865 56677888742 12
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccC
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRD 641 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~ 641 (775)
++++|..|.++|||+ + |++||+|++|||++|.++.++..++....+ |+++.++|.|+|+.+++++++...+
T Consensus 57 ~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~----g~~v~l~v~R~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSI----GDTIKITYYRNGKEETTSIKLNKLE 128 (134)
T ss_dssp SCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHHHHHHHHHHSST----TCEEEEEEEETTEEEEEEEECCCC-
T ss_pred CCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCC----CCEEEEEEEECCEEEEEEEEEcccC
Confidence 567799999999999 7 999999999999999999999998876542 7899999999999999999876543
No 24
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.52 E-value=3.2e-14 Score=144.53 Aligned_cols=165 Identities=10% Similarity=0.026 Sum_probs=115.6
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCC--ceEEEEE----cCCCeEEeE-EEEEEeCCCcEEEEEeCCCCCC-----cc
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISA--SDVMLSF----AAFPIEIPG-EVVFLHPVHNFALIAYDPSSLG-----VA 383 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~--~~I~Vt~----~d~~~~~~A-~Vv~~dp~~DlAILk~d~~~l~-----~~ 383 (775)
..|+|++|+ +++|||++|++.... ..+.|.+ .+ +..+++ +++..|+..||||||++...++ ..
T Consensus 23 ~~c~G~lI~----~~~VLTaaHcv~~~~~~~~i~v~~~~~~~~-g~~~~~~~v~~~~~~~DiAll~l~~~~~~~~~~~~~ 97 (210)
T 2as9_A 23 KDATGFVIG----KNTIITNKHVSKDYKVGDRITAHPNGDKGN-GGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFN 97 (210)
T ss_dssp SSCEEEEEE----TTEEEECHHHHHHCCTTCEEEESCCGGGCC-SCEEEEEEEEECSSSSSCEEEEECSEEEEEETTEEE
T ss_pred eeEEEEEEe----CCEEEECHhHCCccCCCCEEEEEeCcccCC-CCEEEEEEEEeCCCCCcEEEEEecCccccccccccc
Confidence 579999999 579999988775332 3566654 34 678888 4888999999999999763221 00
Q ss_pred cccceeeeeeCCCCCCCCCCEEEEEEeCCCCCC----eeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-
Q 004068 384 GASVVRAAELLPEPALRRGDSVYLVGLSRSLQA----TSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF- 458 (775)
Q Consensus 384 ~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~----~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~- 458 (775)
....+.++.|.. .+..|+.++++|+|.+... ..+.++|+.. . ..+|++|+.+.+|.
T Consensus 98 ~~~~v~~i~l~~--~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~----~-------------~~~i~~~~~~~~GdS 158 (210)
T 2as9_A 98 FNENVQAFNFAK--DAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRI----K-------------DNILNFDAYIEPGNS 158 (210)
T ss_dssp GGGSCCCCCBCS--CCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEE----E-------------TTEEEEECCCCTTCT
T ss_pred cccccceeecCC--CCCCCCEEEEEeCCCCCCCCcceEEeeeEEccc----c-------------CCeEEEcCccCCCCc
Confidence 012345567753 4789999999999976543 2356777642 0 13567888877776
Q ss_pred CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcC
Q 004068 459 SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISG 511 (775)
Q Consensus 459 GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g 511 (775)
||||+|.+|+|+||.+..... ......+| ++|++.|+++++..+..
T Consensus 159 GGPlv~~~g~lvGI~s~g~~~-----~~~~~~~~--~~~~~~i~~f~~~~~~~ 204 (210)
T 2as9_A 159 GSPVLNSNNEVIGVVYGGIGK-----IGSEYNGA--VYFTPQIKDFIQKHIEQ 204 (210)
T ss_dssp TCEEECTTSCEEEEECCSCCC-----TTCSSEEE--EECCHHHHHHHHTTCCC
T ss_pred cCcEECCCCeEEEEEeccccc-----CCcccccc--EEEcHHHHHHHHHhhhh
Confidence 999999999999998754432 11233344 79999999998876543
No 25
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.46 E-value=8.1e-13 Score=133.32 Aligned_cols=167 Identities=11% Similarity=0.059 Sum_probs=114.6
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe-CCCcEEEEEeCCCCCCccccccee----e
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH-PVHNFALIAYDPSSLGVAGASVVR----A 390 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d-p~~DlAILk~d~~~l~~~~~~~v~----~ 390 (775)
.-.+||++.. ...+|||||.|++ .+...+. .+ ..+.|+++..| |..|+||||++...... ..+. .
T Consensus 16 ~CT~Gf~v~~-~~~~~ilTa~Hc~-~~~~~v~---~~--~~~~g~vv~~~~~~~D~Avi~i~~~~~~~---~~v~~~g~~ 85 (198)
T 2h5c_A 16 LCSVGFSVTR-GATKGFVTAGHCG-TVNATAR---IG--GAVVGTFAARVFPGNDRAWVSLTSAQTLL---PRVANGSSF 85 (198)
T ss_dssp EEECCEEEEE-TTEEEEEECGGGC-CTTCEEE---ET--TEEEEEEEEEECSBSCEEEEEECTTSEEE---EEEEETTEE
T ss_pred CCCcCEEEec-CCeeEEEECcccC-CCCCEEE---eC--CcEEEEEEecCCCCCCEEEEEeCCCCccC---ceEecCCce
Confidence 3458999974 2468999997765 4555554 44 48889999999 99999999998643210 1111 1
Q ss_pred eeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceE
Q 004068 391 AELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRV 469 (775)
Q Consensus 391 ~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~V 469 (775)
+.+..+..+++||.|..+|+|.+ .+.|+|+.+...+..+.. .| ..+|++|+.++++. ||||+|.+|++
T Consensus 86 ~~v~g~~~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~~~~g---~~----~~~i~t~~~~~~GDSGGPl~~~~g~~ 154 (198)
T 2h5c_A 86 VTVRGSTEAAVGAAVCRSGRTTG----YQCGTITAKNVTANYAEG---AV----RGLTQGNACMGRGDSGGSWITSAGQA 154 (198)
T ss_dssp EECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE---EE----EEEEEECSCCBTTCTTCEEECTTCBE
T ss_pred EEecCcccCCCCCeEEEeecCcc----eEEEEEEeeeeEEEeCCC---eE----eeeEEecccCCCCcceeEEEeeCCEE
Confidence 34555566899999999999976 578999976433332211 12 36899999999987 99999999999
Q ss_pred EEEeeeec-cc--ccccCCCCCCceeeeccccchhhhHH
Q 004068 470 QAIWGSFS-TQ--VKFGCSSSEDHQFVRGIPIYTISRVL 505 (775)
Q Consensus 470 vGI~~~~~-~~--~~~~~~~~~~~~f~~aIPi~~i~~vl 505 (775)
|||+++.. .. .........+..| ++|++.++..+
T Consensus 155 vGI~s~~~~~~~~~~c~~~~~~g~~f--~~Pi~~vl~~~ 191 (198)
T 2h5c_A 155 QGVMSGGNVQSNGNNCGIPASQRSSL--FERLQPILSQY 191 (198)
T ss_dssp EEEEEEECCCTTSBSTTSCGGGCCEE--EEEHHHHHHHH
T ss_pred EEEEEeecCccCCCccccccCCceEE--EEEHHHHHHHC
Confidence 99998643 11 0000001224555 79999888754
No 26
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.35 E-value=6.4e-12 Score=149.99 Aligned_cols=152 Identities=17% Similarity=0.209 Sum_probs=110.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE--EEEEEEecccC
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGRE--IELQVGTDVRD 641 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~--~~l~V~l~~~~ 641 (775)
.+++|..|.++|||++ + |+.||+|++|||+.+.++....... .+.. .+..+.|+|.|++.. ..+++.+....
T Consensus 89 ~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~-~l~~---~g~~v~l~v~R~~~~~~~~~~v~l~k~~ 164 (721)
T 2xkx_A 89 PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVE-ALKE---AGSIVRLYVMRRKPPAEKVMEIKLIKGP 164 (721)
T ss_pred CCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHH-Hhhc---cccccceEEEecccccccceeeeeeeec
Confidence 5667999999999998 6 9999999999999999985443332 2221 367899999998854 23444443211
Q ss_pred CCCcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHh
Q 004068 642 GNGTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKE 718 (775)
Q Consensus 642 ~~~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~ 718 (775)
.-+|+.+...... ..++ ...|++|..|.+||||+++| |++||+|++|||+++.++ .++...++.
T Consensus 165 --------~~lG~~i~~~~~~----~~~~-~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 231 (721)
T 2xkx_A 165 --------KGLGFSIAGGVGN----QHIP-GDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN 231 (721)
T ss_pred --------CCCceeeccCCCc----cccC-CCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHc
Confidence 1145555432110 0011 13499999999999999999 999999999999999986 577777775
Q ss_pred cCCCCEEEEEEEEeCCeEE
Q 004068 719 IEHGEFVRVRTVHLNGKPR 737 (775)
Q Consensus 719 i~~g~~V~L~~V~Rdg~~~ 737 (775)
.++.+.|. |.|+|...
T Consensus 232 --~~~~v~l~-V~R~g~~~ 247 (721)
T 2xkx_A 232 --TYDVVYLK-VAKPSNAY 247 (721)
T ss_pred --CCCeEEEE-EEeCCccc
Confidence 36789998 68888754
No 27
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.32 E-value=4.9e-13 Score=148.44 Aligned_cols=132 Identities=17% Similarity=0.212 Sum_probs=50.3
Q ss_pred eEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccCC
Q 004068 567 VLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRDG 642 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~~ 642 (775)
+.+|..|.++|||++ + |+.||+|++|||+++.+| .++..++.... .+..+.++|.|++...++.+.....
T Consensus 233 g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~----~~~~v~l~v~r~~~~~~v~l~~~~~-- 306 (388)
T 3suz_A 233 TVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLK----NQTQVKLNIVSCPPVTTVLIKRPDL-- 306 (388)
T ss_dssp CCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCT----TCSCEEEEEEECCSCC-----------
T ss_pred CEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhcc----CCCccccccccccccceeeEeecCC--
Confidence 456899999999998 6 999999999999999999 66666664332 2567999999998776655432111
Q ss_pred CCcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcC
Q 004068 643 NGTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIE 720 (775)
Q Consensus 643 ~~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~ 720 (775)
...+|+.+ . +.+|..|.+||||+++||++||.|++|||+++. +++++.+.++.
T Consensus 307 ------~~~lG~~i--------------~---~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~-- 361 (388)
T 3suz_A 307 ------KYQLGFSV--------------Q---NGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSN-- 361 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------CCccceEE--------------e---cCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--
Confidence 01123221 1 338899999999999999999999999999997 56888888886
Q ss_pred CCCEEEEEE
Q 004068 721 HGEFVRVRT 729 (775)
Q Consensus 721 ~g~~V~L~~ 729 (775)
.+..+.|++
T Consensus 362 ~~~~v~L~V 370 (388)
T 3suz_A 362 SVGEIHMKT 370 (388)
T ss_dssp ---------
T ss_pred CCCeEEEEE
Confidence 466777773
No 28
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.31 E-value=4.2e-12 Score=127.41 Aligned_cols=161 Identities=12% Similarity=0.143 Sum_probs=106.0
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCC---ceEEEEE----cCCCeEEeE-EEEEEeCCCcEEEEEeCCCCCCccc-cc
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISA---SDVMLSF----AAFPIEIPG-EVVFLHPVHNFALIAYDPSSLGVAG-AS 386 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~---~~I~Vt~----~d~~~~~~A-~Vv~~dp~~DlAILk~d~~~l~~~~-~~ 386 (775)
..|+|++|+ +++|||++|++.... ..+.+.+ .+ +..+++ +++..|+..|+||||++...+++.. ..
T Consensus 22 ~~c~G~lI~----~~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~-~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~ 96 (200)
T 2w7s_A 22 VGGTGVVVG----KNTIVTNKHIAKSNDIFKNRVSAHHSSKGKG-GGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNK 96 (200)
T ss_dssp TTEEEEEEE----TTEEEECHHHHHHHHHTTCCEEETCCSSSCC-CCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGG
T ss_pred ceEEEEEEE----CCEEEEChhhcCCcccCCcEEEEEecCccCC-CcEEEEEEEecCCCcceEEEEEECCCCCCcccccc
Confidence 469999999 579999988764321 2355543 33 677887 5888899999999999764332111 12
Q ss_pred ceeeeeeCCCCCCCCCCEEEEEEeCCCCCC----eeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-Cce
Q 004068 387 VVRAAELLPEPALRRGDSVYLVGLSRSLQA----TSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGV 461 (775)
Q Consensus 387 ~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~----~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGp 461 (775)
.+.++.|. + .+..|+.++++|+|.+... ..+.++|+.. + ..++++++...+|. |||
T Consensus 97 ~v~pi~l~-~-~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~-------------~----~~~~~~~~~~~~GdSGGP 157 (200)
T 2w7s_A 97 NVSYTKFA-D-GAKVKDRISVIGYPKGAQTKYKMFESTGTINHI-------------S----GTFMEFDAYAQPGNSGSP 157 (200)
T ss_dssp SCCCCCBC-C-CCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEE-------------E----TTEEEECSCCCTTCTTCE
T ss_pred cccceecc-c-cCCCCCEEEEEECCCCCCCccceEEeEEEEEcc-------------C----CCEEEEcceeCCCCccCe
Confidence 46667775 3 3789999999999865432 2356666631 0 13467787777776 999
Q ss_pred EEccCceEEEEeeeecccccccCCCCCCceeeecc-ccchhhhHHHHH
Q 004068 462 LTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGI-PIYTISRVLDKI 508 (775)
Q Consensus 462 L~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aI-Pi~~i~~vl~~l 508 (775)
|+|.+|+|+||.+...+. .....+| ++ ....++++|++.
T Consensus 158 l~~~~g~lvGI~s~g~~~------~~~~~~~--~v~~~~~~~~wI~~~ 197 (200)
T 2w7s_A 158 VLNSKHELIGILYAGSGK------DESEKNF--GVYFTPQLKEFIQNN 197 (200)
T ss_dssp EECTTSCEEEEEEEEC----------CCCEE--EEECCHHHHHHHHHT
T ss_pred EECcCCEEEEEEeccccC------CCCccce--eeecHHHHHHHHHhh
Confidence 999999999998753321 0012333 44 346677777654
No 29
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.31 E-value=1.6e-11 Score=127.08 Aligned_cols=167 Identities=18% Similarity=0.221 Sum_probs=108.6
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCc-eEEEEEcCCC------------eEEeEEEEEEeC---CCcEEEEEeCCCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISAS-DVMLSFAAFP------------IEIPGEVVFLHP---VHNFALIAYDPSS 379 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~-~I~Vt~~d~~------------~~~~A~Vv~~dp---~~DlAILk~d~~~ 379 (775)
..|+|++|+ .++|||++|++..... .+.|++.++. ..+.++++..|| ..||||||++...
T Consensus 55 ~~c~G~lI~----~~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~ 130 (242)
T 1agj_A 55 TSATGVLIG----KNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQ 130 (242)
T ss_dssp EEEEEEECS----SSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCT
T ss_pred ccEEEEEEe----CCEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCC
Confidence 579999999 5799999888753221 2445553311 358899999999 8999999997542
Q ss_pred CCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCe-eEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC
Q 004068 380 LGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQAT-SRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF 458 (775)
Q Consensus 380 l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~-~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~ 458 (775)
........+.++.|.++..+..|+.++++|+|.+.... .....+.-. . |. ..++.++...+|.
T Consensus 131 ~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~-------~-----~~----~~~~~~~~~c~Gd 194 (242)
T 1agj_A 131 NGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELT-------T-----LS----RGLRYYGFTVPGN 194 (242)
T ss_dssp TSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEEC-------C-----GG----GSEEEECCCCGGG
T ss_pred ccccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEe-------c-----CC----ceEEEeCCcCCCC
Confidence 10000123556888765558899999999999765431 222222200 0 11 1346677777775
Q ss_pred -CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccc-hhhhHHHHH
Q 004068 459 -SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIY-TISRVLDKI 508 (775)
Q Consensus 459 -GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~-~i~~vl~~l 508 (775)
||||+|.+|+|+||.+...+- ........+|+|++ .++++|++.
T Consensus 195 SGGPl~~~~g~lvGI~s~g~~c------~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 195 SGSGIFNSNGELVGIHSSKVSH------LDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp TTCEEECTTSEEEEEEEEEEEC------SSTTCEEEEEEECCHHHHHHHHHH
T ss_pred CchHhcccCCEEEEEEeccccc------cCcCCCceeeEEehHHHHHHHHhh
Confidence 999999999999998753321 11223344588886 777777764
No 30
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.31 E-value=1.7e-11 Score=122.57 Aligned_cols=162 Identities=9% Similarity=-0.010 Sum_probs=109.0
Q ss_pred eeEEEEEEEecCCce--EEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe-CCCcEEEEEeCCCCCCccc---cccee
Q 004068 316 FFGTGVIIYHSQSMG--LVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH-PVHNFALIAYDPSSLGVAG---ASVVR 389 (775)
Q Consensus 316 ~~GSGvVId~~~~~G--lVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d-p~~DlAILk~d~~~l~~~~---~~~v~ 389 (775)
.-.+||++.. .+| |||||.|++..+ .. +++.| +.|++++.| |..|+||||+++...+... +....
T Consensus 14 ~CTsGf~v~~--~~G~~~ilTa~Hc~~~g-~~--v~~~d----~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~ 84 (188)
T 2oua_A 14 RCSVGFAATN--ASGQPGFVTAGHCGSVG-TQ--VSIGN----GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGG 84 (188)
T ss_dssp EEECCEEEEC--TTCCEEEEECGGGCCTT-CE--EEETT----EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCS
T ss_pred cEecCEEEEe--CCCCEEEEECcccCCCC-CE--EEecC----ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcc
Confidence 4578999972 356 999997766443 33 34553 899999999 9999999999764321100 00112
Q ss_pred eeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCce
Q 004068 390 AAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGR 468 (775)
Q Consensus 390 ~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~ 468 (775)
.+++..+..++.|+.|..+|+|.+ .+.|+|+.+...+..+.. .+ ..+++++...+++. ||||+. +|+
T Consensus 85 ~~~l~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~~~~~---~~----~~~~~~~~~~~~GDSGgpl~~-~~~ 152 (188)
T 2oua_A 85 YATVSGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVSYPQG---TV----HSLTRTSVCAEPGDSGGSFIS-GTQ 152 (188)
T ss_dssp EEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE---EE----EEEEEESCCCCTTCTTCEEEE-TTE
T ss_pred eEeccCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEEeCCC---cE----eeeEeeeeecCCCCccceEEE-CCE
Confidence 245766666899999999999976 468898866433322211 12 25788888888885 999994 899
Q ss_pred EEEEeeeecccccccCCCCCCceeeeccccchhhhHH
Q 004068 469 VQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVL 505 (775)
Q Consensus 469 VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl 505 (775)
++||++...+. ....+.+| ++|++.+++.+
T Consensus 153 ~vGi~s~~~~~-----~~~~~~~~--~~pi~~~l~~~ 182 (188)
T 2oua_A 153 AQGVTSGGSGN-----CRTGGTTF--YQEVNPMLNSW 182 (188)
T ss_dssp EEEEEEEEEEE-----TTTEEEEE--EEESHHHHHHT
T ss_pred EEEEEeccCCC-----CCCCCceE--EEEHHHHHHHc
Confidence 99998754322 11223444 79988887643
No 31
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.28 E-value=5e-11 Score=142.30 Aligned_cols=156 Identities=19% Similarity=0.251 Sum_probs=103.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccC
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRD 641 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~ 641 (775)
.+++|..|.++|+|++ + |+.||+|++|||++|.++. ++...+. . .++.+.|+|.|+|+.....+......
T Consensus 184 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~--~----~~~~v~l~V~R~g~~~~~~~~~~p~~ 257 (721)
T 2xkx_A 184 NSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK--N----TYDVVYLKVAKPSNAYLSDSYAPPDI 257 (721)
T ss_pred CceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHH--c----CCCeEEEEEEeCCcccccCCCCCCCc
Confidence 4667999999999998 6 9999999999999999974 4444442 1 25789999999987653322100000
Q ss_pred C------CC----c-----------------ceee----eeee----------eeecCChhhHhhhCCCC---CCCCceE
Q 004068 642 G------NG----T-----------------TRVI----NWCG----------CIVQDPHPAVRALGFLP---EEGHGVY 677 (775)
Q Consensus 642 ~------~~----t-----------------~r~v----~~~G----------~~lq~p~~~vrql~~lp---s~~~gV~ 677 (775)
. .. . .+.. ...+ +.+.. ....+++.. ....|++
T Consensus 258 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~---~~~~lG~~i~~~~~~~gv~ 334 (721)
T 2xkx_A 258 TTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHR---GSTGLGFNIVGGEDGEGIF 334 (721)
T ss_pred ccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEEE---CCCCccEEEeccCCCCCeE
Confidence 0 00 0 0000 0000 00000 000122110 1134899
Q ss_pred EEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeC
Q 004068 678 VARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLN 733 (775)
Q Consensus 678 Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rd 733 (775)
|..|.+||||+++| |++||.|++|||+++.+ ++++.+.+++ .++.+.|. +.|+
T Consensus 335 V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~--~~~~v~L~-v~r~ 390 (721)
T 2xkx_A 335 ISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN--AGQTVTII-AQYK 390 (721)
T ss_pred EEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHh--cCCeEEEE-EEeC
Confidence 99999999999999 99999999999999987 8999999987 36778888 4554
No 32
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.26 E-value=5.1e-11 Score=119.03 Aligned_cols=162 Identities=10% Similarity=0.076 Sum_probs=107.5
Q ss_pred eEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe-CCCcEEEEEeCCCCCCccccccee-----e
Q 004068 317 FGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH-PVHNFALIAYDPSSLGVAGASVVR-----A 390 (775)
Q Consensus 317 ~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d-p~~DlAILk~d~~~l~~~~~~~v~-----~ 390 (775)
-.+||+++. +..+|||||.|++ .+...+ ++.+ +....+++...+ |..|+||||++...... ..+. .
T Consensus 14 CT~Gfiv~~-~g~~~ilT~~Hv~-~~~~~v--~~~~-~~~~~g~~~~~~~~~~DiAlikl~~~~~~~---~~v~~~~g~~ 85 (187)
T 1hpg_A 14 CSAAFNVTK-GGARYFVTAGHCT-NISANW--SASS-GGSVVGVREGTSFPTNDYGIVRYTDGSSPA---GTVDLYNGST 85 (187)
T ss_dssp EECCEEEEE-TTEEEEEECHHHH-TTCSEE--ESST-TCCEEEEEEEEECSBSCEEEEEECSSCCCC---SEEECSSSCE
T ss_pred CcceEEEEE-CCeeEEEECcccC-CCCCeE--EeCC-CceeEEEEeCccCCCCCEEEEEeCCCCCcC---ceEEecCCce
Confidence 356999985 3458999997765 455544 4454 555557888777 88999999997632211 1111 1
Q ss_pred eeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceE
Q 004068 391 AELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRV 469 (775)
Q Consensus 391 ~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~V 469 (775)
..+..+..++.|+.|.++|+|.+ .+.|+|+.+...+..... .-..+|++|+.++++. ||||++. +++
T Consensus 86 ~~i~~~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~~~~-------~~~~~i~t~~~~~~GdSGgpl~~~-~~~ 153 (187)
T 1hpg_A 86 QDISSAANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNYGDG-------PVYNMVRTTACSAGGDSGGAHFAG-SVA 153 (187)
T ss_dssp EECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-------EEEEEEEECCCCCTTCTTCEEEET-TEE
T ss_pred eeeccccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEeCCC-------eEeeeEEeccccCCCCCCCeEEEC-CEE
Confidence 33444455899999999999965 578888876433322211 1236899999998886 9999997 499
Q ss_pred EEEeeeecccccccCCCCCCceeeeccccchhhhHH
Q 004068 470 QAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVL 505 (775)
Q Consensus 470 vGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl 505 (775)
+||++..... ......+| ++|++.+++.+
T Consensus 154 vGi~s~~~~~-----~~~~~~~~--~~~i~~~~~~l 182 (187)
T 1hpg_A 154 LGIHSGSSGC-----SGTAGSAI--HQPVTEALSAY 182 (187)
T ss_dssp EEEEEEESCC-----BTTBCCCE--EEEHHHHHHHH
T ss_pred EEEEEeeCCC-----CCCCCceE--EEEHHHHHHHc
Confidence 9998754321 11223444 68988877644
No 33
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.24 E-value=1.8e-10 Score=121.79 Aligned_cols=175 Identities=14% Similarity=0.166 Sum_probs=114.4
Q ss_pred CcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCc---eEEEEEc-------CCCeEEeEEEE
Q 004068 293 PTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISAS---DVMLSFA-------AFPIEIPGEVV 362 (775)
Q Consensus 293 ~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~---~I~Vt~~-------d~~~~~~A~Vv 362 (775)
+++|+|..... .....|+|++|+ ..+|||++|++..... .+.|.+. ..+....++++
T Consensus 20 ~~~v~i~~~~~---------~~~~~C~G~lI~----~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~ 86 (274)
T 2o8l_A 20 APVTYIQVEAP---------TGTFIASGVVVG----KDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQIT 86 (274)
T ss_dssp TTEEEEEEEET---------TEEEEEEEEEEE----TTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEE
T ss_pred ceEEEEEEEcC---------CCCEEEEEEEEE----CCEEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEE
Confidence 45666654333 234689999999 5699999888754322 3777542 11455566777
Q ss_pred EEeCCCcEEEEEeCCCC----CCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCC---eeEEEEEeCCccccccCCC
Q 004068 363 FLHPVHNFALIAYDPSS----LGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQA---TSRKSIVTNPCAALNISSA 435 (775)
Q Consensus 363 ~~dp~~DlAILk~d~~~----l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~---~~~~g~VS~~~~~~~~~~~ 435 (775)
..+...||||||++... +. ..+.++.|..+..+..|+.++++|+|.+... ....+.|+...
T Consensus 87 ~~~~~~DIALLkL~~~~~~~~~~----~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~-------- 154 (274)
T 2o8l_A 87 KYSGEGDLAIVKFSPNEQNKHIG----EVVKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK-------- 154 (274)
T ss_dssp ECSSSSCCEEEEECCCTTSCCTT----TSSCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE--------
T ss_pred eCCCCCcEEEEEecCcccccccc----cccccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC--------
Confidence 77788999999997542 22 3466688876655889999999999976432 23445555210
Q ss_pred CcccccccceEEEEEeeccCCCC-CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcC
Q 004068 436 DCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISG 511 (775)
Q Consensus 436 ~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g 511 (775)
..+++.++...+|. ||||++.+|+|+||.+...+. ....+| .+ ...++.+|++..+.
T Consensus 155 ---------~~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~-------~~~~~~--~~-~~~~~~wI~~~i~~ 212 (274)
T 2o8l_A 155 ---------GEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPN-------EFNGAV--FI-NENVRNFLKQNIED 212 (274)
T ss_dssp ---------TTEEEESCCCCTTCTTCEEECTTSCEEEEEEEEETT-------TEEEEE--EC-CHHHHHHHHHHCTT
T ss_pred ---------CCeEEeCcccCCCCchhheeccCCeEEEEEeCcccC-------CCCceE--Ee-cHHHHHHHHHHHhh
Confidence 13456777777775 999999999999998753321 112233 34 35667777765543
No 34
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=5.7e-12 Score=117.98 Aligned_cols=113 Identities=16% Similarity=0.220 Sum_probs=88.2
Q ss_pred CCCeEEEEEEecCeEEEEEEEecccCCCCcceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCC
Q 004068 616 DNGKLDITIFRQGREIELQVGTDVRDGNGTTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYAL 695 (775)
Q Consensus 616 ~g~~v~l~V~R~Gk~~~l~V~l~~~~~~~t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~G 695 (775)
.++++.++|.|+|+++++.+++... ..+|+.+.... .. ..|++|..|.++|||+++||++|
T Consensus 7 ~g~~v~l~v~R~g~~~~v~v~~~~~---------~~lG~~~~~~~-------~~---~~gv~V~~V~~~spA~~aGL~~G 67 (128)
T 1uf1_A 7 GDRRSTLHLLQGGDEKKVNLVLGDG---------RSLGLTIRGGA-------EY---GLGIYITGVDPGSEAEGSGLKVG 67 (128)
T ss_dssp TTTSCCSCCCCCSSEEEEEEECCSS---------CCCCEEEECCT-------TT---TCCCEEEEECTTCHHHHHTCCTT
T ss_pred CCCEEEEEEEeCCcEEEEEEEECCC---------CccCEEEECcc-------cC---CCCEEEEEECCCCHHHHCCCCCC
Confidence 3678999999999999999987532 12466665421 01 12889999999999999999999
Q ss_pred CEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeCCCCCC
Q 004068 696 QWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQDLHYWP 749 (775)
Q Consensus 696 D~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d~~y~p 749 (775)
|+|++|||+++.++.+ .++++.+..++.+.|. +.|+|+...++++++..-|.
T Consensus 68 D~I~~vng~~v~~~~~-~~~~~~~~~~~~v~l~-v~R~g~~~~~~v~~~~~~w~ 119 (128)
T 1uf1_A 68 DQILEVNGRSFLNILH-DEAVRLLKSSRHLILT-VKDVGRLPHARTTVDETKWI 119 (128)
T ss_dssp CEEEEETTEECSSCCH-HHHHHHHTTCSEEEEE-EECCSCCSSCSCCCCSSCSC
T ss_pred CEEEEECCEECCCCCH-HHHHHHHhcCCeEEEE-EEECCcccccccccccccee
Confidence 9999999999999755 5555555557899998 78999988888887776554
No 35
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.22 E-value=3.1e-11 Score=110.30 Aligned_cols=101 Identities=21% Similarity=0.380 Sum_probs=81.9
Q ss_pred eeeeeeecCChhhHhh-hCC----CCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCE
Q 004068 650 NWCGCIVQDPHPAVRA-LGF----LPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEF 724 (775)
Q Consensus 650 ~~~G~~lq~p~~~vrq-l~~----lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~ 724 (775)
.|+|+.++..+...++ ++. .+....|++|..|.++|||+++||++||.|++|||+++.++++|.+.++. ++.
T Consensus 6 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~---~~~ 82 (113)
T 2pzd_A 6 RYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT---QSQ 82 (113)
T ss_dssp EECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHH---CSS
T ss_pred cEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHhC---CCe
Confidence 5788888888776655 321 12224599999999999999999999999999999999999999999986 678
Q ss_pred EEEEEEEeCCeEEEEEEEeCCCCCCceeEE
Q 004068 725 VRVRTVHLNGKPRVLTLKQDLHYWPTWELI 754 (775)
Q Consensus 725 V~L~~V~Rdg~~~~ltlk~d~~y~pt~e~~ 754 (775)
+.|+ +.|+|+.+.+++++...-.++|.+.
T Consensus 83 v~l~-v~R~g~~~~~~v~~~~~~~~~~~~~ 111 (113)
T 2pzd_A 83 LAVQ-IRRGRETLTLYVTPEVTEGGGWTMF 111 (113)
T ss_dssp EEEE-EEETTEEEEEEECCEEC---CCCCE
T ss_pred EEEE-EEECCEEEEEEEEEeeccCCcEEEE
Confidence 9998 6899999999999887777777654
No 36
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.19 E-value=5.8e-11 Score=123.41 Aligned_cols=138 Identities=17% Similarity=0.206 Sum_probs=90.6
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCC---ceEEEEEcCC-----------CeEEeEEEEEEeC---CCcEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISA---SDVMLSFAAF-----------PIEIPGEVVFLHP---VHNFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~---~~I~Vt~~d~-----------~~~~~A~Vv~~dp---~~DlAILk~d~ 377 (775)
...|+|++|+ .++|||++|++.... ..+.+..... ...+.++.+..|| ..||||||++.
T Consensus 47 ~~~c~G~lI~----~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~ 122 (246)
T 1qtf_A 47 STLATGVLIG----KNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKP 122 (246)
T ss_dssp TEEEEEEEEE----TTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECC
T ss_pred CceEEEEEEE----CCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeC
Confidence 3679999999 579999988775322 2354443210 0478999999999 99999999976
Q ss_pred CCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCee-EEEEEeCCccccccCCCCcccccccceEEEEEeeccCC
Q 004068 378 SSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATS-RKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGS 456 (775)
Q Consensus 378 ~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~-~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~ 456 (775)
..........+.++.|.++..+..|+.++++|+|.+..... ....+. + .. . ++.++...+
T Consensus 123 ~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~-----~--~~----~--------~~~~~~~~~ 183 (246)
T 1qtf_A 123 NEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIE-----M--FN----D--------SQYFGYTEV 183 (246)
T ss_dssp CTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEE-----E--SS----S--------SBEESCCCG
T ss_pred CccccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeee-----e--cC----c--------EEEeCCCCC
Confidence 43100000135567887665588999999999997754321 111111 0 00 0 122444555
Q ss_pred CC-CceEEccCceEEEEeee
Q 004068 457 TF-SGVLTDEHGRVQAIWGS 475 (775)
Q Consensus 457 ~~-GGpL~d~~G~VvGI~~~ 475 (775)
|+ ||||+|.+|+||||.+.
T Consensus 184 GdSGGPlv~~~g~lvGI~s~ 203 (246)
T 1qtf_A 184 GNSGSGIFNLKGELIGIHSG 203 (246)
T ss_dssp GGTTCEEECTTCCEEEEEEE
T ss_pred CCchhheECCCCEEEEEEec
Confidence 64 99999999999999874
No 37
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.17 E-value=1.8e-10 Score=115.48 Aligned_cols=164 Identities=9% Similarity=0.072 Sum_probs=103.4
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCC--ceEEEEE----cCCCeEEe-EEEEEEeCCCcEEEEEeCCCCC-----Ccc
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISA--SDVMLSF----AAFPIEIP-GEVVFLHPVHNFALIAYDPSSL-----GVA 383 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~--~~I~Vt~----~d~~~~~~-A~Vv~~dp~~DlAILk~d~~~l-----~~~ 383 (775)
..|+|++|+ ..+|||++|++.... ..+.+.. .+ +..+. ++++..++..||||||++.... +..
T Consensus 22 ~~c~G~lI~----~~~VLTaaHcv~~~~~~~~v~v~~~~~~~~-~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~ 96 (204)
T 2vid_A 22 KSATGFVVG----KNTILTNKHVSKNYKVGDRITAHPNSDKGN-GGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFN 96 (204)
T ss_dssp SSCEEEEEE----TTEEEECHHHHTTCCTTCEEEESCCSSSCC-SCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEEE
T ss_pred eeEEEEEEE----CCEEEEChhHCCCccCCceEEEEeccccCC-CcEEEeeEEecCCCCCeEEEEEEcCccccccccccc
Confidence 369999999 559999988775432 2454432 23 45566 6777888899999999975311 000
Q ss_pred cccceeeeeeCCCCCCCCCCEEEEEEeCCCCCC----eeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-
Q 004068 384 GASVVRAAELLPEPALRRGDSVYLVGLSRSLQA----TSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF- 458 (775)
Q Consensus 384 ~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~----~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~- 458 (775)
....+.++.|.+ .+..|+.++++|+|.+... ....|.|+... ...+..++...+|.
T Consensus 97 ~~~~v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~-----------------~~~~~~~~~~~~GdS 157 (204)
T 2vid_A 97 FNDNVTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE-----------------GSSIVYSAHTESGNS 157 (204)
T ss_dssp HHHHCCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE-----------------TTEEEECCCCCGGGT
T ss_pred ccccccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc-----------------CCeEEEecccCCCCc
Confidence 011345567754 3789999999999976543 33455665320 13456676666665
Q ss_pred CceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHH
Q 004068 459 SGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKII 509 (775)
Q Consensus 459 GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~ 509 (775)
||||+|.+|+|+||.+..... ......+|. .++...++++|++..
T Consensus 158 GGPl~~~~g~lvGI~s~g~~~-----~~~~~~~~~-~~~~~~~~~wI~~~~ 202 (204)
T 2vid_A 158 GSPVLNSNNELVGIHFASDVK-----NDDNRNAYG-VYFTPEIKKFIAENI 202 (204)
T ss_dssp TCEEECTTSCEEEEEEEECC--------CCCCEEE-ECCCHHHHHHHHHHS
T ss_pred cCcEECCCCeEEEEEecCccC-----CCcccccce-eEeCHHHHHHHHhhc
Confidence 999999999999998754321 001233441 234466777777654
No 38
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.15 E-value=5e-10 Score=118.02 Aligned_cols=166 Identities=13% Similarity=0.106 Sum_probs=107.9
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCC---ceEEEEEc-------CCCeEEeEEEEEEeCCCcEEEEEeCCCCCCccc
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISA---SDVMLSFA-------AFPIEIPGEVVFLHPVHNFALIAYDPSSLGVAG 384 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~---~~I~Vt~~-------d~~~~~~A~Vv~~dp~~DlAILk~d~~~l~~~~ 384 (775)
...|+|++|+ ..+|||++|++.... ..+.|.+. ..+....++++..+...||||||++........
T Consensus 33 ~~~CgG~lI~----~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~ 108 (268)
T 1wcz_A 33 TFIASGVVVG----KDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHI 108 (268)
T ss_dssp EEEEEEEECS----SSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCH
T ss_pred CEEEEEEEEE----CCEEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCccccccc
Confidence 4689999999 569999988875432 23777543 114455677777778899999999754210000
Q ss_pred ccceeeeeeCCCCCCCCCCEEEEEEeCCCCCC---eeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-Cc
Q 004068 385 ASVVRAAELLPEPALRRGDSVYLVGLSRSLQA---TSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SG 460 (775)
Q Consensus 385 ~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~---~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GG 460 (775)
...+.++.|..+..+..|+.++++|++.+... ....++|+... ..+++.++...+|. ||
T Consensus 109 ~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~-----------------~~~i~~~~~~c~GdSGG 171 (268)
T 1wcz_A 109 GEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK-----------------GEAMQYDLSTTGGNSGS 171 (268)
T ss_dssp HHHSCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE-----------------TTEEEESBCCCTTCTTC
T ss_pred ccccceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC-----------------CCeEEEecccCCCCccC
Confidence 12455678876555789999999999966432 23445555210 13556777777775 99
Q ss_pred eEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcC
Q 004068 461 VLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISG 511 (775)
Q Consensus 461 pL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g 511 (775)
||++.+|+|+||.+..... .....| .+. ..++.+|++..+.
T Consensus 172 PLv~~~g~lvGIvS~G~~~-------~~~~~~--~~~-~~~~~wI~~~i~~ 212 (268)
T 1wcz_A 172 PVFNEKNEVIGIHWGGVPN-------EFNGAV--FIN-ENVRNFLKQNIED 212 (268)
T ss_dssp EEECTTSCEEEEEEEEETT-------TEEEEE--ECC-HHHHHHHHHHCTT
T ss_pred eEEccCCEEEEEEeCCccC-------CcceeE--EcC-HHHHHHHHHHHHh
Confidence 9999999999998743321 112233 343 5677777765543
No 39
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.15 E-value=2.5e-10 Score=107.86 Aligned_cols=94 Identities=16% Similarity=0.161 Sum_probs=77.4
Q ss_pred eeeeeeeecCChh---hHhh-hCCCCC-CCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCC
Q 004068 649 INWCGCIVQDPHP---AVRA-LGFLPE-EGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGE 723 (775)
Q Consensus 649 v~~~G~~lq~p~~---~vrq-l~~lps-~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~ 723 (775)
..|+|+.++.... ..++ ++ ++. ...|++|..|.++|||+ +||++||.|++|||+++.++++|.+.+...+.|+
T Consensus 28 r~~LGv~~~~~~~~~~~~~~~lg-l~~~~~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~ 105 (134)
T 2l97_A 28 RPALGIQMVNLSNVSTSDIRRLN-IPSNVTSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGD 105 (134)
T ss_dssp CCCCCCEEEESSSSCHHHHHHHS-SCSSSCSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTC
T ss_pred eeEeeEEEEECCchhHHHHHHcC-CCcCCCCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCC
Confidence 4678888776543 3333 44 331 23599999999999999 9999999999999999999999999999876799
Q ss_pred EEEEEEEEeCCeEEEEEEEeCC
Q 004068 724 FVRVRTVHLNGKPRVLTLKQDL 745 (775)
Q Consensus 724 ~V~L~~V~Rdg~~~~ltlk~d~ 745 (775)
.++|+ +.|+|+.+.+++++.+
T Consensus 106 ~v~l~-v~R~g~~~~~~v~~~~ 126 (134)
T 2l97_A 106 TIKIT-YYRNGKEETTSIKLNK 126 (134)
T ss_dssp EEEEE-EEETTEEEEEEEECCC
T ss_pred EEEEE-EEECCEEEEEEEEEcc
Confidence 99999 6899999988888753
No 40
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.15 E-value=2.4e-10 Score=114.41 Aligned_cols=153 Identities=12% Similarity=0.085 Sum_probs=103.3
Q ss_pred eEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe-CCCcEEEEEeCCCCCCccccccee-----e
Q 004068 317 FGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH-PVHNFALIAYDPSSLGVAGASVVR-----A 390 (775)
Q Consensus 317 ~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d-p~~DlAILk~d~~~l~~~~~~~v~-----~ 390 (775)
-.+||+++ . +||||.|++. +... |++.+ |++++.| |..|+||||++...... ..+. +
T Consensus 17 CT~Gf~~~----~-~ilTa~Hc~~-~~~~--v~~~d------g~v~~~~~~~~DiAlikl~~~~~~~---~~v~~~~g~~ 79 (189)
T 2ea3_A 17 CSIGFAVN----G-GFITAGHCGR-TGAT--TANPT------GTFAGSSFPGNDYAFVRTGAGVNLL---AQVNNYSGGR 79 (189)
T ss_dssp EECCEEET----T-EEEECGGGCC-TTCE--EETTT------EEEEEEECSBSCEEEEEECTTCEEE---EEEECSSSCE
T ss_pred CccCEEcc----C-eEEEchhcCC-CCCE--EEeCC------cEEEeeCCCCCCEEEEEECCCCccc---cceEecCCce
Confidence 35799998 2 9999977654 4443 34442 8899999 99999999998653211 1222 3
Q ss_pred eeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceE
Q 004068 391 AELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRV 469 (775)
Q Consensus 391 ~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~V 469 (775)
+.+..+..++.|+.|..+|++.+ .+.|+|+.+...+..+.. .+ ..+++++...+++. ||||++ +|++
T Consensus 80 v~l~~s~~~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~~~~~---~~----~~~~~~~~~~~~GDSGgpl~~-~~~~ 147 (189)
T 2ea3_A 80 VQVAGHTAAPVGSAVCRSGSTTG----WHCGTITALNSSVTYPEG---TV----RGLIRTTVCAEPGDSGGSLLA-GNQA 147 (189)
T ss_dssp EECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE---EE----EEEEEESCCCCTTCTTCEEEE-TTEE
T ss_pred eecCCCcCCCCCCEEEEEEeCCc----cEEEEEEecceEEEeCCc---cC----cceEEeeeeccCCCccCeEEE-CCEE
Confidence 45766666899999999999976 467888865433321111 11 25788888888886 999996 8999
Q ss_pred EEEeeeecccccccCCCCCCceeeeccccchhhhHH
Q 004068 470 QAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVL 505 (775)
Q Consensus 470 vGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl 505 (775)
+||.+...+. ......+| ++|++.++..+
T Consensus 148 vGi~s~~~~~-----c~~~~~~~--~~pi~~~l~~~ 176 (189)
T 2ea3_A 148 QGVTSGGSGN-----CRTGGTTF--FQPVNPILQAY 176 (189)
T ss_dssp EEEEEEEEEE-----TTTEEEEE--EEEHHHHHHHH
T ss_pred EEEEeecCCC-----CCCCCcEE--EEEHHHHHHHC
Confidence 9998754321 11223444 68988777644
No 41
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.09 E-value=5.1e-10 Score=111.73 Aligned_cols=156 Identities=12% Similarity=0.065 Sum_probs=104.4
Q ss_pred EEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe-CCCcEEEEEeCCCCCCccccccee-----ee
Q 004068 318 GTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH-PVHNFALIAYDPSSLGVAGASVVR-----AA 391 (775)
Q Consensus 318 GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d-p~~DlAILk~d~~~l~~~~~~~v~-----~~ 391 (775)
-+||++.+ +..+|||||.|++ .+...+.+ ..|++++.| |..|+||||+++..... ..+. ++
T Consensus 17 T~Gf~v~~-~~~~~ilTa~Hc~-~~g~~v~~--------~~g~v~~~~~~~~D~Alikl~~~~~~~---~~v~~~~g~~~ 83 (186)
T 2pfe_A 17 SIGFSVRQ-GSQTGFATAGHCG-STGTRVSS--------PSGTVAGSYFPGRDMGWVRITSADTVT---PLVNRYNGGTV 83 (186)
T ss_dssp ECCEEEEE-TTEEEEEECGGGC-CTTCEEBT--------TTEEEEEEECSBSCEEEEEECTTSEEE---EEEECSSSCEE
T ss_pred EeeEEEEc-CCeeEEEEChhhC-CCCCEEEE--------eeEEEEecCCCCCCEEEEEeCCCcccc---cceeccCCceE
Confidence 47999974 2468999997765 44444432 568999998 99999999998653211 1122 34
Q ss_pred eeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEE
Q 004068 392 ELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQ 470 (775)
Q Consensus 392 ~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~Vv 470 (775)
++..+..++.|+.|..+|++.+ .+.|+|+.....+..+.. .| ..+++++...+++. ||||+. +|+++
T Consensus 84 ~i~~~~~~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~~~~~---~~----~~~~~~~~c~~~GDSGgpl~~-~~~~v 151 (186)
T 2pfe_A 84 TVTGSQEAATGSSVCRSGATTG----WRCGTIQSKNQTVRYAEG---TV----TGLTRTTACAEGGDSGGPWLT-GSQAQ 151 (186)
T ss_dssp ECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE---EE----EEEEEESCCCCTTCTTCEEEE-TTEEE
T ss_pred ecCCCCCCCCCCeEEEEEeCCc----eEEEEEEEEeeeEEeCCc---eE----eceEeccEEecCCCccCeEEE-CCEEE
Confidence 5655666899999999999976 567888865433332221 12 25678887777776 999995 88999
Q ss_pred EEeeeecccccccCCCCCCceeeeccccchhhhHH
Q 004068 471 AIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVL 505 (775)
Q Consensus 471 GI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl 505 (775)
||.+..... ....+..| ++|++.+++.+
T Consensus 152 Gi~s~g~~~-----c~~~~~~~--~~pi~~~l~~~ 179 (186)
T 2pfe_A 152 GVTSGGTGD-----CRSGGITF--FQPINPLLSYF 179 (186)
T ss_dssp EEEEEEEEE-----TTTEEEEE--EEEHHHHHHHH
T ss_pred EEEeecCCC-----CCCCCcEE--EEEHHHHHHHC
Confidence 998754321 11123344 68887776643
No 42
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.06 E-value=3.6e-10 Score=98.54 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=61.6
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLK 742 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk 742 (775)
|+.|..+.++|||+++||++||.|++|||+++.++++|.++++..++++.++|. +.|+|+.+.++++
T Consensus 20 G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~-v~R~g~~~~~~v~ 86 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLT-VERDGQQHDVYIQ 86 (87)
T ss_dssp EEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEE-EEETTEEEEEEEE
T ss_pred EEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEE-EEECCEEEEEEEE
Confidence 788999999999999999999999999999999999999999887678999999 6899998888775
No 43
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.06 E-value=3.7e-10 Score=103.15 Aligned_cols=100 Identities=24% Similarity=0.289 Sum_probs=80.5
Q ss_pred cccCCCcceEEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh
Q 004068 522 VKRPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF 600 (775)
Q Consensus 522 v~r~~p~~~~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~ 600 (775)
+.|+ |||+.+..++...++.+|++.. .++....+++|..|.++|||+++ |++||+|++|||+++.++
T Consensus 3 v~r~-----~lGi~~~~l~~~~~~~~~~~~~-------~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 70 (113)
T 2pzd_A 3 HMRR-----YIGVMMLTLSPSILAELQLREP-------SFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA 70 (113)
T ss_dssp --CE-----ECCEEEEECCHHHHHHHHHHCS-------SCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSH
T ss_pred cccc-----EeEEEEEeCCHHHHHHhccccc-------cccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCH
Confidence 5566 9999999998888877776321 12233467789999999999996 999999999999999999
Q ss_pred hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEeccc
Q 004068 601 HDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVR 640 (775)
Q Consensus 601 ~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~ 640 (775)
.++..++.. ++.+.++|.|+|+.+++.+.+...
T Consensus 71 ~~~~~~l~~-------~~~v~l~v~R~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 71 EDVYEAVRT-------QSQLAVQIRRGRETLTLYVTPEVT 103 (113)
T ss_dssp HHHHHHHHH-------CSSEEEEEEETTEEEEEEECCEEC
T ss_pred HHHHHHHhC-------CCeEEEEEEECCEEEEEEEEEeec
Confidence 999988852 467999999999999988887654
No 44
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.05 E-value=9e-10 Score=98.57 Aligned_cols=69 Identities=23% Similarity=0.309 Sum_probs=63.6
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQD 744 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d 744 (775)
.|++|..|.++|||++ ||++||.|++|||+++.++++|.+.+.....|+.++|+ +.|+|+...+++++.
T Consensus 7 ~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~-v~R~g~~~~~~v~~~ 75 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKIN-YKHGDKNEQADIKLT 75 (100)
T ss_dssp CCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEE-EEETTEEEEEEEECE
T ss_pred CCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEE-EEECCEEEEEEEEEe
Confidence 4999999999999995 99999999999999999999999999987678999999 689999988888764
No 45
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.05 E-value=5.6e-10 Score=101.83 Aligned_cols=91 Identities=20% Similarity=0.317 Sum_probs=75.7
Q ss_pred eeeeeeecCChhhHhh-hC----CCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCE
Q 004068 650 NWCGCIVQDPHPAVRA-LG----FLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEF 724 (775)
Q Consensus 650 ~~~G~~lq~p~~~vrq-l~----~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~ 724 (775)
.|+|+.++.++...++ ++ .++....|++|..|.++|||+++||++||+|++|||+++.++++|.+.++. ++.
T Consensus 6 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~---g~~ 82 (112)
T 2p3w_A 6 RFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAVLT---ESP 82 (112)
T ss_dssp EECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHH---CSS
T ss_pred ceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHhC---CCe
Confidence 5789999888877765 32 122224599999999999999999999999999999999999999999853 788
Q ss_pred EEEEEEEeCCeEEEEEEEeC
Q 004068 725 VRVRTVHLNGKPRVLTLKQD 744 (775)
Q Consensus 725 V~L~~V~Rdg~~~~ltlk~d 744 (775)
+.|+ +.|+|+.+.+++++.
T Consensus 83 v~l~-v~R~g~~~~~~v~~~ 101 (112)
T 2p3w_A 83 LLLE-VRRGNDDLLFSIAPE 101 (112)
T ss_dssp EEEE-EEETTEEEEEEECCE
T ss_pred EEEE-EEECCEEEEEEEEEe
Confidence 9999 689999988888764
No 46
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.02 E-value=5.7e-10 Score=101.77 Aligned_cols=97 Identities=13% Similarity=0.237 Sum_probs=78.0
Q ss_pred EEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHh
Q 004068 531 ILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQA 609 (775)
Q Consensus 531 ~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~ 609 (775)
|||+.+..++...++.+|++.. ..+....+++|..|.++|||+++ |++||+|++|||+++.++.++..++.
T Consensus 7 ~lGi~~~~l~~~~~~~~~~~~~-------~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~- 78 (112)
T 2p3w_A 7 FIGIRMRTITPSLVDELKASNP-------DFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAVL- 78 (112)
T ss_dssp ECCEEEEECCHHHHHHHHHHCT-------TC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH-
T ss_pred eeeEEEecCCHHHHHHhcccCc-------CcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHh-
Confidence 8999999998877777765321 11222356779999999999985 99999999999999999999988873
Q ss_pred cCCCCCCCCeEEEEEEecCeEEEEEEEecccC
Q 004068 610 LDKDGEDNGKLDITIFRQGREIELQVGTDVRD 641 (775)
Q Consensus 610 ~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~ 641 (775)
.++.+.++|.|+|+.+++.+.+....
T Consensus 79 ------~g~~v~l~v~R~g~~~~~~v~~~~~~ 104 (112)
T 2p3w_A 79 ------TESPLLLEVRRGNDDLLFSIAPEVVM 104 (112)
T ss_dssp ------HCSSEEEEEEETTEEEEEEECCEEEC
T ss_pred ------CCCeEEEEEEECCEEEEEEEEEeeeC
Confidence 25779999999999988888876543
No 47
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=99.01 E-value=1.3e-09 Score=119.15 Aligned_cols=94 Identities=21% Similarity=0.221 Sum_probs=81.8
Q ss_pred eeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEE
Q 004068 649 INWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVR 728 (775)
Q Consensus 649 v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~ 728 (775)
..|+|+.++.......+...++. ..|++|..|.++|||+++||++||+|++|||+++.++++|.+.+...++|+.++|+
T Consensus 239 ~~~lGv~~~~~~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~ 317 (345)
T 3stj_A 239 RGLLGIKGTEMSADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLG 317 (345)
T ss_dssp CEECCEEEEECCHHHHHHTTCSC-CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEE
T ss_pred ccccceeeEeecHHHHHhcCCCC-CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEE
Confidence 45889998888777766433442 45999999999999999999999999999999999999999999988789999999
Q ss_pred EEEeCCeEEEEEEEeC
Q 004068 729 TVHLNGKPRVLTLKQD 744 (775)
Q Consensus 729 ~V~Rdg~~~~ltlk~d 744 (775)
+.|+|+.+.+++++.
T Consensus 318 -v~R~g~~~~~~v~l~ 332 (345)
T 3stj_A 318 -LLRNGKPLEVEVTLD 332 (345)
T ss_dssp -EEETTEEEEEEEECE
T ss_pred -EEECCEEEEEEEEEc
Confidence 789999998888754
No 48
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.00 E-value=3.4e-09 Score=105.14 Aligned_cols=167 Identities=14% Similarity=0.066 Sum_probs=104.8
Q ss_pred eeEE-EEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEe-CCCcEEEEEeCCCCCCcccccceeeeee
Q 004068 316 FFGT-GVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLH-PVHNFALIAYDPSSLGVAGASVVRAAEL 393 (775)
Q Consensus 316 ~~GS-GvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~d-p~~DlAILk~d~~~l~~~~~~~v~~~~l 393 (775)
..|| ||++.. +..++|||++|++ .+...+.+...+ ... .++++..+ +..|+||||++...+.. ...+.++.+
T Consensus 12 ~~ct~Gf~v~~-~~~~~ilTaaHcv-~~~~~~~v~~~~-~~~-~g~~~~~~~~~~DiAll~l~~~~~~~--~~~v~~~~l 85 (185)
T 2qa9_E 12 GRCSLGFNVRS-GSTYYFLTAGHCT-DGATTWWANSAR-TTV-LGTTSGSSFPNNDYGIVRYTNTTIPK--DGTVGGQDI 85 (185)
T ss_dssp CEEECCEEEEE-TTEEEEEECHHHH-TTCSEEESSTTS-CSE-EEEEEEEECSBSCEEEEEECCSSSCC--CCEETTEEC
T ss_pred CcEeccEEEEE-CCceEEEECcccC-CCCCcEEecCCC-ceE-eEEEeccccCCCCEEEEEecCCCccc--cCccceeee
Confidence 3465 999974 3578999997765 455666665443 333 46777888 99999999997622221 123344566
Q ss_pred CCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEEE
Q 004068 394 LPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQAI 472 (775)
Q Consensus 394 g~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvGI 472 (775)
..+..+..|+.++++|++.+ .+.++++.....+..... ..| ..+++.+....+|. ||||++.+ +++||
T Consensus 86 ~~~~~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~~~~~--~~~----~~~~~~~~cac~GDSGGPlv~~~-~~vGI 154 (185)
T 2qa9_E 86 TSAANATVGMAVTRRGSTTG----THSGSVTALNATVNYGGG--DVV----YGMIRTNVCAEPGDSGGPLYSGT-RAIGL 154 (185)
T ss_dssp CEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEECSTT--CEE----EEEEEESCCCCTTCTTCEEEETT-EEEEE
T ss_pred CCcccCCCCCEEEEecCCCc----eeEeEEEEEEEEEEcCCC--CEE----eceEEecccCCCCCccceEEECC-EEEEE
Confidence 54344789999999999753 346677754323211111 112 13567776666775 99999975 99999
Q ss_pred eeeecccccccCCCCCCceeeeccccchhhhHHH
Q 004068 473 WGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLD 506 (775)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~ 506 (775)
.+...+. ......+ +..|++.++++++
T Consensus 155 ~s~g~~~-----~~~~~p~--vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 155 TSGGSGN-----CSSGGTT--FFQPVTEALSAYG 181 (185)
T ss_dssp EEEEEEE-----TTTEEEE--EEEEHHHHHHHHT
T ss_pred EEecCCC-----CCCCCcE--EEEEHHHHHHhhC
Confidence 8754322 1111223 3588888877764
No 49
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.98 E-value=1.5e-10 Score=102.13 Aligned_cols=69 Identities=17% Similarity=0.303 Sum_probs=63.7
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQDL 745 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d~ 745 (775)
|++|..|.++|||++ ||++||.|++|||+++.++++|.++++..++|+.++|+ +.|+|+.+.+++++..
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~-v~R~g~~~~~~v~~~~ 70 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLK-IEREEKEKRVTLTLKQ 70 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEE-EESSSCEECCCEECCC
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEE-EEECCEEEEEEEEEec
Confidence 788999999999999 99999999999999999999999999987679999999 7899999988888764
No 50
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.97 E-value=8.8e-10 Score=97.61 Aligned_cols=70 Identities=27% Similarity=0.280 Sum_probs=64.6
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQDL 745 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d~ 745 (775)
.|++|..|.++|||++ ||++||.|++|||+++.++++|.++++..+.|+.++|+ +.|+|+.+.+++++..
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~-v~R~g~~~~~~v~~~~ 74 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVT-FIRDRKQHEAELVLKP 74 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEE-EEETTEEEEEEECCCB
T ss_pred CcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEE-EEECCEEEEEEEEEee
Confidence 4899999999999999 99999999999999999999999999987679999999 7899999988887653
No 51
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.96 E-value=1.6e-09 Score=97.76 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=61.2
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLK 742 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk 742 (775)
|++|....++|||+++||++||+|++|||+++.+|++|.++++...+++.++|. +.|+|+.+.++++
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~-v~R~g~~~~~~v~ 104 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLT-VERDGQQHDVYIQ 104 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEE-EEETTEEEEEEEE
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEE-EEECCEEEEEEEe
Confidence 777888888889999999999999999999999999999999987778999999 6899999888775
No 52
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.94 E-value=3.4e-09 Score=94.05 Aligned_cols=68 Identities=18% Similarity=0.099 Sum_probs=59.6
Q ss_pred EEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCC--eEEEEEEEeCC
Q 004068 677 YVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNG--KPRVLTLKQDL 745 (775)
Q Consensus 677 ~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg--~~~~ltlk~d~ 745 (775)
+|..|.++|||+++||++||.|++|||+++.+|+++.+.+.....++.+.|. +.|+| ...+++|+...
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~-v~R~g~~~~~~~~l~l~~ 74 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTIT-VAPFGSDQRRDVKLDLRH 74 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEE-EECTTCCCCEEEEEECTT
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEE-EEECCCCceEEEEEEccc
Confidence 7899999999999999999999999999999999999999886556899999 68887 46677766554
No 53
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.94 E-value=2.5e-09 Score=94.87 Aligned_cols=86 Identities=12% Similarity=0.066 Sum_probs=68.0
Q ss_pred EEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecC--eEEEEEEEecccC-CCC
Q 004068 569 RVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQG--REIELQVGTDVRD-GNG 644 (775)
Q Consensus 569 ~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~G--k~~~l~V~l~~~~-~~~ 644 (775)
+|..|.++|||+++ |++||+|++|||++|.+|.++..++..... ++.+.++|.|+| ...++++++..+. +..
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~----~~~v~l~v~R~g~~~~~~~~l~l~~~~~~~~ 80 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIG----DESTTITVAPFGSDQRRDVKLDLRHWAFEPD 80 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTT----CSEEEEEEECTTCCCCEEEEEECTTCCCCTT
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcC----CCcEEEEEEECCCCceEEEEEEccccccCCC
Confidence 38899999999995 999999999999999999999998865442 478999999987 5678888888775 223
Q ss_pred cceeeeeeeeeecC
Q 004068 645 TTRVINWCGCIVQD 658 (775)
Q Consensus 645 t~r~v~~~G~~lq~ 658 (775)
....+..+|+.+..
T Consensus 81 ~~~~l~~lGl~p~~ 94 (95)
T 3id1_A 81 KEDPVSSLGIRPRG 94 (95)
T ss_dssp TSCHHHHTTEEECC
T ss_pred CCCHHHHcCccCCC
Confidence 33445556665543
No 54
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.92 E-value=3.7e-09 Score=94.54 Aligned_cols=74 Identities=11% Similarity=0.137 Sum_probs=65.1
Q ss_pred cceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccCC
Q 004068 565 RQVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRDG 642 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~~ 642 (775)
..+++|..|.++|||+++|++||+|++|||++|.+|.++..++.... .++.+.++|.|+|+.+++++++...++
T Consensus 6 ~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~----~g~~v~l~v~R~g~~~~~~v~~~~~~~ 79 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKK----VGDTVKINYKHGDKNEQADIKLTAIDK 79 (100)
T ss_dssp CCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHHHHHHHHTSC----TTCEEEEEEEETTEEEEEEEECEECST
T ss_pred CCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHHHHHHHHhCC----CCCEEEEEEEECCEEEEEEEEEecCCC
Confidence 35777999999999997799999999999999999999999986544 368899999999999999999876653
No 55
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.90 E-value=6.8e-09 Score=117.30 Aligned_cols=96 Identities=23% Similarity=0.238 Sum_probs=84.4
Q ss_pred eeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEE
Q 004068 649 INWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVR 728 (775)
Q Consensus 649 v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~ 728 (775)
..|+|+.++......++...++....|++|..|.++|||+++||++||+|++|||+++.+++++...+.....|+.++|+
T Consensus 257 r~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~ 336 (451)
T 3pv2_A 257 RGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKII 336 (451)
T ss_dssp CCBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEE
T ss_pred cccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEE
Confidence 46899999988888777544554225999999999999999999999999999999999999999999987889999999
Q ss_pred EEEeCCeEEEEEEEeCC
Q 004068 729 TVHLNGKPRVLTLKQDL 745 (775)
Q Consensus 729 ~V~Rdg~~~~ltlk~d~ 745 (775)
+.|+|+...+++++..
T Consensus 337 -V~R~g~~~~~~v~l~~ 352 (451)
T 3pv2_A 337 -VERDNKPLTLSAVVTD 352 (451)
T ss_dssp -EEETTEEEEEEEECBC
T ss_pred -EEECCEEEEEEEEEcc
Confidence 7899999999888754
No 56
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.90 E-value=2.8e-09 Score=114.98 Aligned_cols=94 Identities=17% Similarity=0.194 Sum_probs=75.9
Q ss_pred eeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEE
Q 004068 650 NWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 650 ~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
.|+|+.++......++...++. ..|++|..|.++|||+++||++||.|++|||+++.++++|.+.++..++|+.++|+
T Consensus 221 ~~lGi~~~~~~~~~~~~~g~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~- 298 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGGIDQ-LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV- 298 (318)
T ss_dssp EECCEEEEECSCCCSSSSCSSS-CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEE-
T ss_pred ccceeEeeecchhHHHhccCCC-CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEE-
Confidence 4566666554433333212322 35999999999999999999999999999999999999999999987789999999
Q ss_pred EEeCCeEEEEEEEeCC
Q 004068 730 VHLNGKPRVLTLKQDL 745 (775)
Q Consensus 730 V~Rdg~~~~ltlk~d~ 745 (775)
+.|+|+.+.+++++..
T Consensus 299 v~R~g~~~~~~v~~~~ 314 (318)
T 1te0_A 299 VMRDDKQLTLQVTIQE 314 (318)
T ss_dssp EESSSCEEEEEEECEE
T ss_pred EEECCEEEEEEEEEcc
Confidence 7899999999888653
No 57
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.89 E-value=5.4e-09 Score=99.34 Aligned_cols=69 Identities=22% Similarity=0.294 Sum_probs=56.9
Q ss_pred CCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEe
Q 004068 673 GHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQ 743 (775)
Q Consensus 673 ~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~ 743 (775)
..|++|..|.+||||+++||++||+|++|||+++. +++++.+.++. ..|+.++|+ +.|+|+...++++.
T Consensus 63 ~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~g~~v~l~-v~R~g~~~~v~~~~ 133 (139)
T 2vz5_A 63 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTK-RSEEVVRLL-VTRQSLQKAVQQSM 133 (139)
T ss_dssp CCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCC-TTCSEEEEE-EEECC-------CC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHh-CCCCEEEEE-EEECCEEEEEEEee
Confidence 35999999999999999999999999999999999 58999999998 678999999 78999887776654
No 58
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.89 E-value=3.6e-09 Score=92.50 Aligned_cols=68 Identities=22% Similarity=0.296 Sum_probs=61.3
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQD 744 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d 744 (775)
.++|..|.++|||+++||++||.|++|||+++.++++|.+.+... .|+.+.|+ +.|+|+.+.+++++.
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~-v~R~g~~~~~~v~~~ 72 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDN-PGXSLALE-IERQGSPLSLTLIPE 72 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHC-TTCCEEEE-EEETTEEEEEEECCE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcC-CCCeEEEE-EEECCeEEEEEEEEe
Confidence 457889999999999999999999999999999999999999984 68899999 689999988888754
No 59
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.86 E-value=2.9e-09 Score=92.91 Aligned_cols=60 Identities=23% Similarity=0.291 Sum_probs=54.3
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
|++|..|.++|||+++||++||.|++|||+++ .+++++.++++....++.+.|+ +.|+|+
T Consensus 29 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~g~ 90 (90)
T 2eaq_A 29 GIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMD-VRRYGK 90 (90)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEE-EEEEC-
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEE-EEeCCC
Confidence 89999999999999999999999999999999 8999999999875568899998 677763
No 60
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.84 E-value=7.2e-09 Score=90.61 Aligned_cols=66 Identities=17% Similarity=0.247 Sum_probs=51.0
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQ 743 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~ 743 (775)
|++|..|.++|||+++| |++||.|++|||+++. +++++.+.++.. +..+.|. +.|+|+.+++++.+
T Consensus 24 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~-v~r~g~~~~~~v~p 92 (92)
T 3cyy_A 24 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMV-VQRDERATLLNVPD 92 (92)
T ss_dssp EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT--TTEEEEE-EEC-----------
T ss_pred CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCcEEEE-EEeCCceeeeeCCC
Confidence 88999999999999999 9999999999999999 999999999873 4588998 68999887777653
No 61
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.83 E-value=5.7e-09 Score=92.36 Aligned_cols=72 Identities=21% Similarity=0.271 Sum_probs=64.2
Q ss_pred ceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccC
Q 004068 566 QVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRD 641 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~ 641 (775)
.+++|..|.++|||+++|+.||+|++|||+++.++.++..++.... .++.+.++|.|+|+.+++++++...+
T Consensus 5 ~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~l~~~l~~~~----~g~~v~l~v~R~g~~~~~~v~~~~~~ 76 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQIVSYVREKQ----AGDRVRVTFIRDRKQHEAELVLKPFP 76 (94)
T ss_dssp CCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHHHHHHHHHSC----TTCCEEEEEEETTEEEEEEECCCBCS
T ss_pred CcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHHHHHHHHhCC----CCCEEEEEEEECCEEEEEEEEEeeCC
Confidence 4677999999999998999999999999999999999999887654 27889999999999999999887664
No 62
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.83 E-value=1.6e-08 Score=113.86 Aligned_cols=96 Identities=21% Similarity=0.211 Sum_probs=82.6
Q ss_pred eeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEE
Q 004068 649 INWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVR 728 (775)
Q Consensus 649 v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~ 728 (775)
..|+|+.++.......+...++. ..|++|..|.++|||+++||++||+|++|||+++.+++++...+....+|+.++|+
T Consensus 239 r~~lGv~~~~~~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~ 317 (436)
T 4a8c_A 239 RGLLGIKGTEMSADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLG 317 (436)
T ss_pred cccCceEecccCHHHHHHhCCCC-CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEE
Confidence 35888888888777666433442 35999999999999999999999999999999999999999999987789999999
Q ss_pred EEEeCCeEEEEEEEeCCC
Q 004068 729 TVHLNGKPRVLTLKQDLH 746 (775)
Q Consensus 729 ~V~Rdg~~~~ltlk~d~~ 746 (775)
+.|+|+...+++++...
T Consensus 318 -v~R~g~~~~~~v~l~~~ 334 (436)
T 4a8c_A 318 -LLRNGKPLEVEVTLDTS 334 (436)
T ss_pred -EEECCEEEEEEEEECCC
Confidence 78999999998887653
No 63
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.83 E-value=1.3e-08 Score=92.57 Aligned_cols=70 Identities=17% Similarity=0.172 Sum_probs=62.7
Q ss_pred CceEEEEEcCCCHHhHcCC-CCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYGL-YALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQDL 745 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL-~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d~ 745 (775)
.+++|..|.++|||+++|| ++||.|++|||+++.+ ++++.+.++. .+|+.+.|. +.|+|+.+.+++++..
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~-v~R~g~~~~~~~~~~~ 98 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRG-IASETHVVL-ILRGPEGFTTHLETTF 98 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHH-SCSSSEEEE-EEECCTTSEEEEEEEE
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCCcEEEE-EEeCCcccceEeeeec
Confidence 3899999999999999998 9999999999999999 9999999998 468899999 7899988877777543
No 64
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.80 E-value=4.8e-09 Score=91.77 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=54.9
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHH--HHHHHHHhcCCCCEEEEEEEEeCCeEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLE--AFVNVTKEIEHGEFVRVRTVHLNGKPR 737 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~--~f~~~v~~i~~g~~V~L~~V~Rdg~~~ 737 (775)
+++|..|.++|||+++||++||.|++|||+++.++. ++.+.++. .++.++|. +.|+|+..
T Consensus 28 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~g~~~ 89 (91)
T 2pkt_A 28 PLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG--CTDNLTLT-VARSEHES 89 (91)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEE-EEEECCCC
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEECCccc
Confidence 889999999999999999999999999999999998 99999987 68999999 67887643
No 65
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=98.80 E-value=1e-08 Score=100.17 Aligned_cols=118 Identities=11% Similarity=-0.005 Sum_probs=82.5
Q ss_pred ccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEeCCCcEEEEEeCCCCCCcccccceeeee
Q 004068 313 SQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLHPVHNFALIAYDPSSLGVAGASVVRAAE 392 (775)
Q Consensus 313 ~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~dp~~DlAILk~d~~~l~~~~~~~v~~~~ 392 (775)
...+.|+||+|+ ..++|||+.| |..+.....|++ + +.+++ +..++..|||+++++.+..+ .+...++
T Consensus 12 ~~~G~GsgF~i~---~~g~vVTA~H-Vv~~~~~~~V~~-~-G~~~~---Vgf~~~~DlA~l~v~~~~~~----g~~P~l~ 78 (198)
T 1mbm_A 12 SSYGTGSVWTRN---NEVVVLTASH-VVGRANMATLKI-G-DAMLT---LTFKKNGDFAEAVTTQSELP----GNWPQLH 78 (198)
T ss_dssp SSEEEEEEEEET---TEEEEEEEHH-HHCTTCEEEEEE-T-TEEEE---EECEEETTEEEEEECTTTSC----SCCCBCC
T ss_pred ccCCccceEEEC---CCeEEEEeee-EEccCceEEEEE-C-CEEEE---eecccCCcEEEEEeeccCCC----CCCcccc
Confidence 345789999999 7999999965 555677788999 5 88887 77889999999999422221 1112277
Q ss_pred eCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCceEEE
Q 004068 393 LLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGRVQA 471 (775)
Q Consensus 393 lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~VvG 471 (775)
|++ +++|+.-+ ..+.|.++.. ..+ ..+++++ ++|. |||++|.+ +|||
T Consensus 79 las---p~vG~a~~----------~~~tG~~~~l----~g~-----------~g~l~~t---~PGDSGsPVl~~~-~vIG 126 (198)
T 1mbm_A 79 FAQ---PTTGPASW----------CTATGDEEGL----LSG-----------EVCLAWT---TSGDSGSAVVQGD-AVVG 126 (198)
T ss_dssp BCC---CCSEEEEE----------EETTEEEEEE----ECS-----------SCEECCC---CGGGTTCEEEETT-EEEE
T ss_pred cCC---CcccceEE----------eeccccEEEE----ecC-----------CceeEcC---CCCCCCCccccCC-eEEE
Confidence 754 58888222 2445555532 211 1456666 5664 99999999 9999
Q ss_pred Eeee
Q 004068 472 IWGS 475 (775)
Q Consensus 472 I~~~ 475 (775)
|++.
T Consensus 127 V~T~ 130 (198)
T 1mbm_A 127 VHTG 130 (198)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9986
No 66
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.80 E-value=1.2e-08 Score=88.68 Aligned_cols=68 Identities=21% Similarity=0.280 Sum_probs=57.9
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGT 637 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l 637 (775)
.++.|..+.++|||+++ |++||+|++|||++|.+|.++..++.... .++.+.++|.|+|+..++.+.+
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~----~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMN----EMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGG----GCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcC----CCCEEEEEEEECCEEEEEEEEC
Confidence 46668888888888985 99999999999999999999998886554 2688999999999988877653
No 67
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.78 E-value=1.2e-09 Score=96.15 Aligned_cols=70 Identities=11% Similarity=0.181 Sum_probs=61.5
Q ss_pred EEEEEEcCCChHhhhccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccC
Q 004068 568 LRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRD 641 (775)
Q Consensus 568 l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~ 641 (775)
++|..|.++|||+++|++||+|++|||++|.++.++..++.... .++++.++|.|+|+.+++++++...+
T Consensus 3 v~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~l~~~l~~~~----~g~~v~l~v~R~g~~~~~~v~~~~~~ 72 (91)
T 2kjp_A 3 IYASSVVENMPAKGKIEVGDKIISADGKNYQSAEKLIDYISSKK----AGDKVTLKIEREEKEKRVTLTLKQFP 72 (91)
T ss_dssp SSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHHHHHHHSSCC----SSCEECEEEESSSCEECCCEECCCCT
T ss_pred eEEEEECCCChHHHcCCCCCEEEEECCEECCCHHHHHHHHHcCC----CCCEEEEEEEECCEEEEEEEEEeccC
Confidence 44788999999998999999999999999999999998885443 27889999999999999999887665
No 68
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.76 E-value=1.9e-08 Score=87.12 Aligned_cols=58 Identities=14% Similarity=0.123 Sum_probs=53.1
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++||++||.|++|||+++.+ ++++.+.++..+ +.++|. +.|+|+
T Consensus 27 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~--~~v~l~-v~R~~~ 86 (87)
T 2pa1_A 27 PIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP--SPLRLQ-LDRITS 86 (87)
T ss_dssp EEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC--SSEEEE-EEECCC
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeEEEE-EEecCC
Confidence 8899999999999999999999999999999999 899999999843 789998 678764
No 69
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.76 E-value=9.5e-09 Score=89.96 Aligned_cols=60 Identities=23% Similarity=0.293 Sum_probs=51.0
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++||++||.|++|||+++. +++++.+.++.. ++.++|+ +.|++..
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~--g~~v~l~-v~r~~~~ 88 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS--GKNVTLL-VCGKKAQ 88 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS--CSEEEEE-EEC----
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCEEEEE-EEeCCcc
Confidence 3889999999999999999999999999999999 999999999983 8999999 5676653
No 70
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.75 E-value=7.3e-09 Score=91.54 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=54.7
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.|++|..|.++|||+++||++||.|++|||+++.+ ++++.+.++. . ++.++|. +.|+|..
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~-g~~v~l~-v~r~~~~ 91 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQG-Q-GSCVSLT-VVDPEAD 91 (96)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHT-T-TTEEEEE-EECCCTT
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C-CCEEEEE-EECCCCc
Confidence 38999999999999999999999999999999999 8999999998 3 8999999 6777754
No 71
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.75 E-value=2.4e-08 Score=108.11 Aligned_cols=91 Identities=22% Similarity=0.385 Sum_probs=75.3
Q ss_pred eeeeeeecCChhhHhh-hCC----CCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCE
Q 004068 650 NWCGCIVQDPHPAVRA-LGF----LPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEF 724 (775)
Q Consensus 650 ~~~G~~lq~p~~~vrq-l~~----lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~ 724 (775)
.|+|+.++......++ ++. ++....|++|..|.++|||+++||++||+|++|||+++.++++|.+.++. ++.
T Consensus 227 ~~lGv~~~~l~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~~~l~~---~~~ 303 (325)
T 1lcy_A 227 RYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT---QSQ 303 (325)
T ss_dssp EECCEEEEECCHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHTT---CSS
T ss_pred cccceEeecCCHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHhC---CCe
Confidence 4667777777666554 321 12223599999999999999999999999999999999999999999985 588
Q ss_pred EEEEEEEeCCeEEEEEEEeC
Q 004068 725 VRVRTVHLNGKPRVLTLKQD 744 (775)
Q Consensus 725 V~L~~V~Rdg~~~~ltlk~d 744 (775)
+.|+ +.|+|+.+.+++++.
T Consensus 304 v~l~-v~R~g~~~~~~v~~~ 322 (325)
T 1lcy_A 304 LAVQ-IRRGRETLTLYVTPE 322 (325)
T ss_dssp EEEE-EEETTEEEEEEECCE
T ss_pred EEEE-EEECCEEEEEEEEEe
Confidence 9999 789999999998864
No 72
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.74 E-value=1.2e-08 Score=90.09 Aligned_cols=62 Identities=23% Similarity=0.330 Sum_probs=52.8
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.|++|..|.++|||+++||++||.|++|||+++.++.++..+......++.++|+ +.|+|++
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~-v~R~g~~ 95 (97)
T 2w4f_A 34 EGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMR-VWRERET 95 (97)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEE-EECCSSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEE-EEeCCcc
Confidence 4899999999999999999999999999999999987765444332468999999 6888864
No 73
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=6.4e-09 Score=96.65 Aligned_cols=65 Identities=17% Similarity=0.162 Sum_probs=58.1
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLT 740 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~lt 740 (775)
.|++|..|.++|||+++| |++||+|++|||+++.+++++.++++. .+|+.++|+ +.|+|+.+...
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~-v~R~g~~~~~~ 113 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTS-EENKNFSLL-IARPELQLDEG 113 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTC-SSCCSCCEE-EEECSSCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHh-CCCCEEEEE-EEECCEEeecc
Confidence 489999999999999999 999999999999999999999999998 568889998 68888754443
No 74
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.74 E-value=1.4e-08 Score=89.75 Aligned_cols=60 Identities=15% Similarity=0.243 Sum_probs=55.1
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++. .++.++|. +.|++.+
T Consensus 32 ~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~~~ 94 (97)
T 2jil_A 32 RPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ--CGQEAALL-IEYDVSE 94 (97)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH--SCSEEEEE-EEEECCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCCc
Confidence 489999999999999999 99999999999999999 9999999998 58999999 6777754
No 75
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.72 E-value=3.4e-08 Score=106.73 Aligned_cols=70 Identities=13% Similarity=0.207 Sum_probs=64.7
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEe-CCeEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHL-NGKPRVLTLKQD 744 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~R-dg~~~~ltlk~d 744 (775)
.|++|..|.++|||+++||++||+|++|||+++.++.+|...+...+.|+.++|+ +.| +|+.+.+++++.
T Consensus 242 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~-v~R~~g~~~~~~v~~~ 312 (324)
T 1y8t_A 242 LGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALT-FQDPSGGSRTVQVTLG 312 (324)
T ss_dssp SSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEE-EECSSCCEEEEEEECE
T ss_pred CceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEE-EEECCCCEEEEEEEEc
Confidence 4899999999999999999999999999999999999999999887779999999 689 999988888764
No 76
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=98.72 E-value=3.2e-08 Score=97.72 Aligned_cols=158 Identities=11% Similarity=0.035 Sum_probs=94.8
Q ss_pred eeEE-EEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEeCCCcEEEEEeCCCCCCcccccceeee---
Q 004068 316 FFGT-GVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLHPVHNFALIAYDPSSLGVAGASVVRAA--- 391 (775)
Q Consensus 316 ~~GS-GvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~dp~~DlAILk~d~~~l~~~~~~~v~~~--- 391 (775)
..|| ||+|.. ....+|||++|++. +...+.+-..+ -...|..|+||||++...... ..+.++
T Consensus 12 ~~ct~G~~v~~-~~~~~vlTaaHc~~-~~~~~~~G~~~---------~~~~~~~DiAlikl~~~~~~~---~~v~~i~~~ 77 (181)
T 2sga_A 12 SRCSLGFNVSV-NGVAHALTAGHCTN-ISASWSIGTRT---------GTSFPNNDYGIIRHSNPAAAD---GRVYLYNGS 77 (181)
T ss_dssp EEEECCEEEEE-TTEEEEEECHHHHT-TCSEETTEEEE---------EEECSBSCEEEEEESCGGGCC---CEEECSSSC
T ss_pred CcEeccEEEEE-CCceEEEECcccCC-CCCceeeccee---------CCcCCCCCEEEEEccCCCccc---ceEEecCCc
Confidence 4566 999984 35789999988754 33333221111 123477899999997642211 123332
Q ss_pred --eeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCce
Q 004068 392 --ELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGR 468 (775)
Q Consensus 392 --~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~ 468 (775)
.+..+..++.|+.|.++|++.+ .+.|.++.....+..... ..| ...|+++....++. ||||++.+ +
T Consensus 78 ~~~~~~~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~~~~~--~~~----~~~i~~~~c~~~GDSGGPlv~~~-~ 146 (181)
T 2sga_A 78 YQDITTAGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVNYGSS--GIV----YGMIQTNVCAQPGDSGGSLFAGS-T 146 (181)
T ss_dssp EEECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEECGGG--CEE----EEEEEESCCCCTTCTTCEEEETT-E
T ss_pred ceeecccccCCCCCEEEEeecCCC----ccEEEEEEeEEEEECCCC--CEE----eeeEecccccCCCCCCCEEEECC-E
Confidence 2322334789999999998854 356777755333211110 012 24677787777775 99999976 9
Q ss_pred EEEEeeeecccccccCCCCCCceeeeccccchhhhHH
Q 004068 469 VQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVL 505 (775)
Q Consensus 469 VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl 505 (775)
++||++..... ......+ +..|++.++.++
T Consensus 147 ~vGI~s~g~~~-----~~~~~~~--v~~~v~~~~~~l 176 (181)
T 2sga_A 147 ALGLTSGGSGN-----CRTGGTT--FYQPVTEALSAY 176 (181)
T ss_dssp EEEEEEEEEEE-----TTTEEEE--EEEEHHHHHHHH
T ss_pred EEEEEEeeCCC-----CcCCCce--EEEEHHHHHHhc
Confidence 99998754322 1112233 358888777755
No 77
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.71 E-value=4.4e-08 Score=85.54 Aligned_cols=66 Identities=21% Similarity=0.302 Sum_probs=58.0
Q ss_pred EEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecc
Q 004068 569 RVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDV 639 (775)
Q Consensus 569 ~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~ 639 (775)
+|..|.++|||+++ |+.||+|++|||+++.+|.++...+.... ++.+.++|.|+|+.+++.+.+..
T Consensus 7 ~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~-----g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 7 VLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDNP-----GXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp BCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHCT-----TCCEEEEEEETTEEEEEEECCEE
T ss_pred EEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcCC-----CCeEEEEEEECCeEEEEEEEEee
Confidence 37889999999985 99999999999999999999999886532 67899999999999888888654
No 78
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.71 E-value=2e-08 Score=89.65 Aligned_cols=57 Identities=18% Similarity=0.093 Sum_probs=51.9
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeC--CCHHHHHHHHHhc-CCCCEEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRT--PDLEAFVNVTKEI-EHGEFVRVRTVH 731 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV--~dl~~f~~~v~~i-~~g~~V~L~~V~ 731 (775)
+++|.+|.+||||++|||++||.|++|||+++ .+|+++.+.+++. ++++.+.|++..
T Consensus 40 ~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 40 AVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 77999999999999999999999999999997 5999999999985 579999998644
No 79
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.70 E-value=2.4e-08 Score=87.85 Aligned_cols=58 Identities=21% Similarity=0.279 Sum_probs=50.3
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
+++|..|.++|||+++||++||.|++|||+++.++.++ +++..+..++.++|+ +.|++
T Consensus 30 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~~~~g~~v~l~-v~R~~ 87 (93)
T 2dls_A 30 IVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-EVVKLIKSGAYVALT-LLGSS 87 (93)
T ss_dssp SCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-HHHHHHTSSSEEEEE-EECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-HHHHhhcCCCEEEEE-EEECC
Confidence 88999999999999999999999999999999997555 555555679999999 56655
No 80
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.70 E-value=2.6e-08 Score=92.74 Aligned_cols=60 Identities=23% Similarity=0.307 Sum_probs=55.3
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
|++|..|.++|||+++||++||+|++|||+++.++ +++.+++.....++.++|. +.|+++
T Consensus 52 gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~~~ 113 (124)
T 3tsv_A 52 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL-AQKKKD 113 (124)
T ss_dssp CEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEE-EEECHH
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE-EEECCc
Confidence 89999999999999999999999999999999999 9999999876779999998 677654
No 81
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.69 E-value=3.6e-08 Score=89.42 Aligned_cols=62 Identities=19% Similarity=0.218 Sum_probs=55.3
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++..++++.++|+ +.|+++.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~~~~ 103 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLL-VFRQEEA 103 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEE-EEECCCC
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEE-EEeCCCC
Confidence 489999999999999999 99999999999999966 58999999986668999999 6777753
No 82
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.69 E-value=4e-08 Score=85.21 Aligned_cols=58 Identities=9% Similarity=0.086 Sum_probs=52.2
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++||++||.|++|||+++.++ +++.+.++. .++.++|+ +.|+|.
T Consensus 28 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~g~ 87 (88)
T 2uzc_A 28 PLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKG--CTGSLNMT-LQRESD 87 (88)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEE-EECCCC
T ss_pred CeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEE-EEeCCC
Confidence 78999999999999999999999999999999999 888888886 38899998 677764
No 83
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.69 E-value=5.2e-08 Score=87.82 Aligned_cols=68 Identities=21% Similarity=0.280 Sum_probs=57.3
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGT 637 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l 637 (775)
.++.|..+.++|||+++ |++||+|++|||++|.+|.++..++.... .++.+.++|.|+|+.+.+.+.+
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~----~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMN----EMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHT----TCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcC----CCCeEEEEEEECCEEEEEEEeC
Confidence 45557777788888985 99999999999999999999998886554 3688999999999988877653
No 84
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.69 E-value=1.6e-08 Score=89.75 Aligned_cols=60 Identities=23% Similarity=0.212 Sum_probs=53.8
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++||++||.|++|||+++.+ ++++.+.++.. .++.+.|. +.|+|+
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~-v~R~g~ 94 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLV-VDRETD 94 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEE-CCHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCcEEEEE-EECCch
Confidence 38999999999999999999999999999999999 99999999985 67777777 677664
No 85
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.69 E-value=4.2e-08 Score=86.89 Aligned_cols=59 Identities=24% Similarity=0.396 Sum_probs=52.7
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++| |++||.|++|||+++.++ .++.+.++. .++.++|+ +.|+|+
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~g~ 98 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE--ADFKIELE-IQTFDK 98 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEE-EEEC--
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEE-EEeCCC
Confidence 389999999999999999 999999999999999997 889999987 58999999 678764
No 86
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.68 E-value=3.8e-08 Score=91.82 Aligned_cols=67 Identities=27% Similarity=0.338 Sum_probs=59.6
Q ss_pred CCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEe
Q 004068 673 GHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQ 743 (775)
Q Consensus 673 ~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~ 743 (775)
..|++|..|.++|||+++ |++||+|++|||+++.++++|.+.++....|+.++|+ + |+|+ +.+++.+
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~-V-R~g~-~~v~l~~ 90 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINIT-T-DQGT-FHLKTGR 90 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEE-E-TTEE-EEEECCB
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEE-E-ECCE-EEEEEec
Confidence 359999999999999999 9999999999999999999999999976678999999 5 9998 5555543
No 87
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.68 E-value=5.8e-08 Score=89.86 Aligned_cols=61 Identities=20% Similarity=0.205 Sum_probs=54.9
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.+++|..|.++|||+++| |++||+|++|||+++.+ ++++.+.++..++++.++|+ +.|+|+
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~g~ 121 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLL-VFRQED 121 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEE-EEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEE-EEeCCC
Confidence 389999999999999999 99999999999999988 58999999986668999999 677763
No 88
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=2.2e-08 Score=89.24 Aligned_cols=58 Identities=26% Similarity=0.327 Sum_probs=50.0
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++||++||+|++|||+++.++ +++.+.++ .++.+.|. +.|+|+
T Consensus 36 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~---~~~~v~l~-v~R~g~ 95 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLT---SSSRLHMM-VRRMGS 95 (100)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHH---SCSSEEEE-EEECSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc---CCCEEEEE-EEECCc
Confidence 389999999999999999999999999999999996 55555555 37889999 678876
No 89
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.67 E-value=6.2e-08 Score=83.43 Aligned_cols=56 Identities=16% Similarity=0.138 Sum_probs=50.7
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
.+++|..|.++|||+++| |++||.|++|||+++. +++++.+.++..+.++.++|.+
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v 83 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLEL 83 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEE
Confidence 378999999999999999 9999999999999998 5689999999876688888883
No 90
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.67 E-value=9.7e-08 Score=85.46 Aligned_cols=58 Identities=26% Similarity=0.327 Sum_probs=51.1
Q ss_pred CCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEe
Q 004068 673 GHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHL 732 (775)
Q Consensus 673 ~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~R 732 (775)
..|++|..|.++|||+++||++||.|++|||+++.+ ++++.+.++. ..++.+.|. +.|
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~-v~R 103 (104)
T 3sfj_A 44 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTK-RSEEVVRLL-VTR 103 (104)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTC-TTCSEEEEE-EEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCCEEEEE-EEc
Confidence 459999999999999999999999999999999966 6699999987 568899998 444
No 91
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=5.8e-08 Score=86.77 Aligned_cols=59 Identities=25% Similarity=0.325 Sum_probs=50.8
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++.. +..++|+ +.|.+.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~-v~r~~~ 100 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA--GNPVVFM-VQSIIS 100 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC--CSSEEEE-EECCCC
T ss_pred CCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEE-EEECCC
Confidence 489999999999999999 99999999999999998 99999999984 3478888 566543
No 92
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.66 E-value=5.4e-08 Score=84.87 Aligned_cols=58 Identities=29% Similarity=0.371 Sum_probs=52.3
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.|++|..|.++|||+++||++||.|++|||+++.++ +++.+.++.. ++.++|. +.|.+
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~-v~r~~ 87 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR--EDEARLL-VVGPS 87 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS--SSEEEEE-EECCC
T ss_pred CCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCcEEEE-EEccC
Confidence 389999999999999999999999999999999999 9999999873 7899998 45544
No 93
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.66 E-value=6e-08 Score=86.10 Aligned_cols=58 Identities=24% Similarity=0.209 Sum_probs=53.2
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
|++|..|.++|||+++||++||+|++|||+++. +++++...++. .|+.+.|+ +.|+++
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLK--SGNKISLR-TTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEE-EECSCS
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCCEEEEE-EEECCC
Confidence 779999999999999999999999999999999 89999999995 58999999 677665
No 94
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.65 E-value=3.6e-08 Score=107.69 Aligned_cols=70 Identities=19% Similarity=0.270 Sum_probs=65.4
Q ss_pred CceEEEEEcCCCHHhHcCCCC-----------CCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYGLYA-----------LQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLK 742 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~-----------GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk 742 (775)
.|++|..|.++|||++|||++ ||+|++|||++|.++++|.+.+.....|+.++|+ +.|+|+.+.++++
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~-v~R~g~~~~~~v~ 329 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVE-VLRGDHKEKISVT 329 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEE-EECSSSEEEEEEE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEE-EEECCEEEEEEEE
Confidence 399999999999999999999 9999999999999999999999887789999999 7899999988887
Q ss_pred eC
Q 004068 743 QD 744 (775)
Q Consensus 743 ~d 744 (775)
+.
T Consensus 330 l~ 331 (348)
T 3qo6_A 330 LE 331 (348)
T ss_dssp CE
T ss_pred Ec
Confidence 64
No 95
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.65 E-value=3.8e-08 Score=84.75 Aligned_cols=58 Identities=17% Similarity=0.168 Sum_probs=50.1
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++||++||.|++|||+++.++ .++...++. .++.++|. +.|+++
T Consensus 26 ~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~~~ 85 (85)
T 1rgw_A 26 PLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKS--ASYNLSLT-LQKSKR 85 (85)
T ss_dssp CCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTT--CSSCEEEE-EESCCC
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHc--CCCeEEEE-EEeCCC
Confidence 78999999999999999999999999999999998 777777765 35668888 577763
No 96
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.64 E-value=7.4e-08 Score=86.59 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=52.4
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQ 743 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~ 743 (775)
.|++|..|.++|||+++| |++||.|++|||+++.+ +.++...++. .++.++|+ +.|++....+++.+
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~~~~~~~~~~p 102 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN--TSDFVYLK-VAKPTSMYISRHHH 102 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS--CCSEEEEE-EECCCC--------
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEcCCCCCCccccc
Confidence 489999999999999999 99999999999999966 6677777775 37899999 78999887777654
No 97
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=4.2e-08 Score=88.90 Aligned_cols=60 Identities=25% Similarity=0.422 Sum_probs=50.9
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHH--HHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEA--FVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~--f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.|++|..|.++|||+++||++||+|++|||+++.++.+ ....++. .++.++|+ +.|+|++
T Consensus 46 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~g~~ 107 (110)
T 1x5q_A 46 EGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG--AGTAVQMR-VWRESGP 107 (110)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS--CCSEEEEE-EEECSSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC--CCCeEEEE-EEECCcc
Confidence 48999999999999999999999999999999999544 3444443 68999999 6888865
No 98
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.64 E-value=1.3e-08 Score=91.29 Aligned_cols=67 Identities=7% Similarity=0.022 Sum_probs=57.9
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQD 744 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d 744 (775)
+++|..|.++|||+++||++||+|++|||+++.++ .++...++. .++.++|. +.|+++.+.+++++.
T Consensus 30 ~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~g~~~~~~v~p~ 98 (103)
T 1wf7_A 30 PLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKA--CTGSLNMT-LQRASAAAKSEPVSS 98 (103)
T ss_dssp EEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHH--CSSEEEEE-ECCCSCCCCCCCCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCCcCCCCCCCC
Confidence 68999999999999999999999999999999987 777777776 37889998 689998777766653
No 99
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.63 E-value=5.4e-08 Score=84.65 Aligned_cols=58 Identities=16% Similarity=0.254 Sum_probs=50.9
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++||++||.|++|||+++. ++.++.+.++. .++.+.|. +.|++.
T Consensus 28 ~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~ 87 (89)
T 2q3g_A 28 PLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRA--CGERLSLG-LSRAIT 87 (89)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHT--CTTEEEEE-EEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEE-EEeCCC
Confidence 789999999999999999999999999999999 45888888876 37889998 567664
No 100
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.63 E-value=3.1e-08 Score=91.73 Aligned_cols=61 Identities=20% Similarity=0.233 Sum_probs=55.5
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
+++|..|.++|||+++| |++||+|++|||+++.+ ++++.++++..++++.++|+ +.|++..
T Consensus 46 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~~~~ 109 (122)
T 1v5q_A 46 PPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLE-IEFDVAE 109 (122)
T ss_dssp CCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEE-EEEECCC
T ss_pred CcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEE-EEECCcc
Confidence 67999999999999999 99999999999999988 99999999987668899999 6777653
No 101
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.62 E-value=7.2e-08 Score=87.76 Aligned_cols=55 Identities=16% Similarity=0.064 Sum_probs=48.9
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTV 730 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V 730 (775)
+++|..|.++|||+++||++||.|++|||+++. +++++.+.++. ..++.++|+++
T Consensus 45 ~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~-~~~~~v~l~V~ 101 (109)
T 2vsv_A 45 PVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKS-FGEDEIEMKVV 101 (109)
T ss_dssp SCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTSCEEEEEE
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEEEE
Confidence 679999999999999999999999999999999 66999999987 34566888854
No 102
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=1.3e-07 Score=82.74 Aligned_cols=58 Identities=17% Similarity=0.155 Sum_probs=50.2
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.+||||+++||++||.|++|||+++.+ ++++.+.++. .+..++|+ +.|++.
T Consensus 25 ~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~-v~R~~~ 84 (91)
T 2f5y_A 25 PVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILL-VWRMVP 84 (91)
T ss_dssp SCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEE-EEECC-
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCC
Confidence 7899999999999999999999999999999995 5888888886 35678888 567664
No 103
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.62 E-value=7.5e-08 Score=93.78 Aligned_cols=68 Identities=21% Similarity=0.290 Sum_probs=57.9
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHH-HHHHHHhcCCCCEEEEEEEEeCC-eEEEEEEEeC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEA-FVNVTKEIEHGEFVRVRTVHLNG-KPRVLTLKQD 744 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~-f~~~v~~i~~g~~V~L~~V~Rdg-~~~~ltlk~d 744 (775)
|++|..|.+||||+++||++||.|++|||+++.++.+ +...+.....++.++|++ |++ +++.++++++
T Consensus 28 g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~v--r~~~~~~~v~l~~~ 97 (166)
T 1w9e_A 28 GIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI--RDRPFERTITMHKD 97 (166)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEE--ECCTTCEEEEEECC
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEE--EcCCCcEEEEEecC
Confidence 8999999999999999999999999999999999987 665544435688999994 555 8888888854
No 104
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.61 E-value=1e-07 Score=80.93 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=50.0
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
|++|..|.++|||+++| |++||.|++|||+++. +++++.+.++.. +..++|. +.|+|
T Consensus 22 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~-v~R~g 81 (81)
T 2rcz_A 22 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMV-VQRDE 81 (81)
T ss_dssp EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTS--TTEEEEE-EEC--
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC--CCeEEEE-EEeCC
Confidence 88999999999999999 9999999999999999 999999999873 3488888 56654
No 105
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.61 E-value=2.6e-08 Score=87.78 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=53.7
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
|++|..|.++|||+++||++||+|++|||+++.++ +++.+.++.. ++.++|. +.|+|++
T Consensus 31 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~-v~R~g~~ 91 (94)
T 1vb7_A 31 PIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQS--ASPLRLQ-LDRSSGP 91 (94)
T ss_dssp EEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC--CSSEEEE-EECCCCC
T ss_pred CeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEE-EEECCcC
Confidence 88999999999999999999999999999999998 9999999974 3789998 6888864
No 106
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.61 E-value=6.2e-08 Score=85.18 Aligned_cols=59 Identities=22% Similarity=0.349 Sum_probs=51.2
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++||++||.|++|||+++.++ +++.+.++. .+..+.+.++.+++.
T Consensus 30 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 30 GQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK--GGDQTTLLVLDKELE 90 (95)
T ss_dssp SEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEEECC--
T ss_pred CEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEECCccc
Confidence 89999999999999999999999999999999999 999999997 366777776665544
No 107
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.61 E-value=6.8e-08 Score=83.82 Aligned_cols=59 Identities=29% Similarity=0.306 Sum_probs=49.9
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.+++|..+ ++|||+ +||++||.|++|||+++.++ +++.+.+++.+.|+.++|. +.|+|+
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~g~ 87 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLL-VQRQTR 87 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEE-EEEECC
T ss_pred CcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEE-EEeCCc
Confidence 38889887 999999 99999999999999999987 8999999875678999999 577664
No 108
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.60 E-value=2e-07 Score=84.04 Aligned_cols=59 Identities=24% Similarity=0.397 Sum_probs=51.8
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.+||||+++| |++||.|++|||+++.+ ++++...++. .++.++|+ +.|+++
T Consensus 32 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~-v~R~~~ 93 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKN--TSDFVYLK-VAKPGS 93 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHS--CCSEEEEE-EECCSS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEE-EEeCCC
Confidence 489999999999999999 99999999999999954 7888888876 46799999 678774
No 109
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.60 E-value=1e-07 Score=84.01 Aligned_cols=59 Identities=15% Similarity=0.239 Sum_probs=52.5
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++| |++||.|++|||+++. +++++.+.++. .++.++|. +.|++.
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~~ 94 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLL-LEKGQS 94 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS--CCSEEEEE-EECCSC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEcCCC
Confidence 489999999999999999 9999999999999999 66888888886 47889998 577664
No 110
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.60 E-value=1.1e-07 Score=84.10 Aligned_cols=61 Identities=20% Similarity=0.287 Sum_probs=52.6
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeEE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKPR 737 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~~ 737 (775)
.|++|..|.++|||+++| |++||.|++|||+++.+ +.++...++. .++.++|. +.|++...
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~~~~~ 93 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQ--TPQRVRLT-LYRDEAPY 93 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEE-EEECSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEE-EEcCCCCC
Confidence 389999999999999999 99999999999999988 5678877776 35889998 67887654
No 111
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.60 E-value=1.2e-07 Score=88.00 Aligned_cols=58 Identities=26% Similarity=0.330 Sum_probs=51.5
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.|++|..|.++|||+++| |++||+|++|||+++.+ ++++.+.++.. +..++|+ +.|..
T Consensus 59 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~--~~~v~l~-v~r~~ 119 (123)
T 2iwq_A 59 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA--GNPVVFM-VQSII 119 (123)
T ss_dssp CSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--CSSEEEE-EECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEE-EEECC
Confidence 489999999999999999 99999999999999998 99999999984 4578888 55543
No 112
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=98.60 E-value=9.1e-08 Score=94.98 Aligned_cols=115 Identities=12% Similarity=0.050 Sum_probs=70.7
Q ss_pred ccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEEEEEEeCCCcEEEEEeCC--CCCCcccccceee
Q 004068 313 SQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGEVVFLHPVHNFALIAYDP--SSLGVAGASVVRA 390 (775)
Q Consensus 313 ~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~Vv~~dp~~DlAILk~d~--~~l~~~~~~~v~~ 390 (775)
+..++|+||.|+ .+++|||+.|+| .+... .|+.. +.++. +.+|+..|||+++++. ..+|.
T Consensus 27 ~~~GsGt~F~i~---g~~~VvTA~HVV-g~~~~-vVt~~--g~r~~---~~f~~~~D~All~i~~~~g~~P~-------- 88 (213)
T 3fan_A 27 SSMGSGGVFTID---GKIKCVTAAHVL-TGNSA-RVSGV--GFNQM---LDFDVKGDFAIADCPNWQGVAPK-------- 88 (213)
T ss_dssp SSEEEEEEEEET---TEEEEEEEGGGS-BTTEE-EEEET--TEEEE---EECEEETTEEEEECTTCCSCCCB--------
T ss_pred cCCCceEEEEEC---CcEEEEEeccEe-CCCCE-EEecC--CcEEE---EEecCCCcEEEEEccCcCCCCCc--------
Confidence 445778888888 678999997755 44444 66665 56654 4779999999999953 46665
Q ss_pred eeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeecc---CCCC-CceEEccC
Q 004068 391 AELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDF---GSTF-SGVLTDEH 466 (775)
Q Consensus 391 ~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i---~~~~-GGpL~d~~ 466 (775)
++|+... ..|-..+..-+ -...|.+ +.|..+ ++|. ||||+|.+
T Consensus 89 lKlA~~~--~~G~a~~~~~~------gv~~G~i-------------------------~~~~al~~T~pGdSGsPVvn~d 135 (213)
T 3fan_A 89 AQFCEDG--WTGRAYWLTSS------GVEPGVI-------------------------GNGFAFCFTACGDSGSPVITEA 135 (213)
T ss_dssp CCBCCTT--CCEEEEEEETT------EEEEEEE-------------------------ETTEEEESSCCCSTTCEEEETT
T ss_pred ceeeeee--ccCceEEEEcc------Ccccccc-------------------------ccCCEEEecCCCCCCCccCCCC
Confidence 7776433 22222121111 0112222 222222 4554 99999999
Q ss_pred ceEEEEeeeecc
Q 004068 467 GRVQAIWGSFST 478 (775)
Q Consensus 467 G~VvGI~~~~~~ 478 (775)
|+||||++...+
T Consensus 136 G~VIGVHt~s~~ 147 (213)
T 3fan_A 136 GELVGVHTGSNK 147 (213)
T ss_dssp SCEEEEEEC---
T ss_pred CcEEEEEeccCC
Confidence 999999985443
No 113
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.60 E-value=7.7e-08 Score=83.79 Aligned_cols=58 Identities=12% Similarity=0.214 Sum_probs=51.2
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEEEEeC
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRTVHLN 733 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~V~Rd 733 (775)
+++|..|.++|||+++| |++||.|++|||+++ .+++++.+.++..+.++.++|. +.|.
T Consensus 28 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~-v~R~ 88 (90)
T 2q9v_A 28 PIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLT-VRQT 88 (90)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEE-EEEC
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEE-EEec
Confidence 78999999999999999 999999999999999 6689999999886545689998 4554
No 114
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.59 E-value=2.8e-08 Score=91.14 Aligned_cols=64 Identities=19% Similarity=0.178 Sum_probs=55.3
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRV 738 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ 738 (775)
.|++|..|.++|||+++||++||+|++|||+++.++.++...+.....++.++|. +.|+++.+.
T Consensus 42 ~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~-v~r~~~~~~ 105 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITIL-AQYNPHVHQ 105 (117)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEE-ECCCSCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE-EEECCchhh
Confidence 3899999999999999999999999999999999998887776554668899998 678776543
No 115
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.59 E-value=2e-08 Score=92.13 Aligned_cols=61 Identities=23% Similarity=0.379 Sum_probs=55.5
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC---CHHHHHHHHHhcCCCCEEEEEEEEeCCeEE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP---DLEAFVNVTKEIEHGEFVRVRTVHLNGKPR 737 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~---dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~ 737 (775)
.|++|..|.++|||+++| |++||.|++|||+++. +++++.+.++. .++.++|. +.|++++.
T Consensus 49 ~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~--~~~~v~l~-v~R~~~~~ 113 (117)
T 2o2t_A 49 LGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK--AKDTVQLV-IARGSLPQ 113 (117)
T ss_dssp EEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH--CCSEEEEE-EESSCCGG
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc--CCCEEEEE-EEeCCcce
Confidence 389999999999999999 9999999999999999 99999999987 48899999 68887653
No 116
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.59 E-value=1.4e-07 Score=87.52 Aligned_cols=60 Identities=17% Similarity=0.078 Sum_probs=54.4
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.+++|..|.++|||+++| |++||+|++|||+++. +++++.++++..+.++.++|. +.|++
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~~ 106 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLV-LCRGY 106 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEE-EEESC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEE-EEeCC
Confidence 379999999999999999 9999999999999998 689999999986668999999 56665
No 117
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.59 E-value=1.2e-07 Score=87.38 Aligned_cols=59 Identities=20% Similarity=0.200 Sum_probs=52.9
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
|++|..|.++|||+++| |++||.|++|||+++. +++++.+.++.. +..++|+ +.|+|+.
T Consensus 54 gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~--~~~v~l~-v~R~g~~ 115 (117)
T 2fne_A 54 PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT--KGTVTLM-VLSSDET 115 (117)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--CSSEEEE-EEECSCE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEE-EEeCCcc
Confidence 89999999999999999 9999999999999999 889999999873 3459998 6788765
No 118
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.59 E-value=1.4e-07 Score=82.33 Aligned_cols=60 Identities=27% Similarity=0.349 Sum_probs=50.8
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.+++|..|.++|||+++||++||.|++|||+++.+ .+++.+.++. . +..+.+.++.|++.
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~-~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRA-A-LNAVRLLVVDPETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-C-SSEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C-CCcEEEEEEcCCcc
Confidence 38999999999999999999999999999999998 6888888887 3 34566555677664
No 119
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.58 E-value=1.3e-07 Score=85.69 Aligned_cols=62 Identities=18% Similarity=0.275 Sum_probs=53.3
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcC-CCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIE-HGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~-~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++... +++.++|+ +.|.+.+
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~-v~R~~~~ 98 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLT-VAKSGGG 98 (108)
T ss_dssp CEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEE-EECCCC-
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEE-EEeCCCC
Confidence 389999999999999999 99999999999999999 899999999851 24469998 6776654
No 120
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.58 E-value=2.3e-08 Score=92.30 Aligned_cols=62 Identities=23% Similarity=0.260 Sum_probs=56.6
Q ss_pred CceEEEEEcC--CCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCeEEE
Q 004068 674 HGVYVARWCH--GSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGKPRV 738 (775)
Q Consensus 674 ~gV~Vs~V~~--GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ 738 (775)
.|++|..|.+ +|||+++||++||+|++|||+++.++ ++|.+.++.. ++.++|+ +.|+|+...
T Consensus 44 ~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~--g~~v~l~-v~R~g~~~~ 109 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT--SQTLQLL-IEHDPVPQR 109 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC--SSCEEEE-EEECSSCCC
T ss_pred CcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC--CCEEEEE-EEECCEEEe
Confidence 4999999999 99999999999999999999999999 9999999984 8889998 688887643
No 121
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=1.2e-07 Score=82.61 Aligned_cols=58 Identities=28% Similarity=0.352 Sum_probs=51.7
Q ss_pred ceEEEEEcCCCHHhH-cCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHR-YGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~-aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.+||||++ +||++||.|++|||+++. +++++.+.++..+ + .++|+ +.|.++
T Consensus 26 ~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-~-~v~l~-v~r~~~ 86 (88)
T 1kwa_A 26 HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMR-G-SITFK-IVPSYR 86 (88)
T ss_dssp GEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCC-E-EEEEE-EECCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-C-cEEEE-EECCcC
Confidence 789999999999999 899999999999999999 9999999999854 5 88888 566554
No 122
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=4.3e-08 Score=87.42 Aligned_cols=60 Identities=22% Similarity=0.287 Sum_probs=52.4
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++||++||+|++|||+++.++.+ .+++..+..++.+.|+ +.|+|+
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~-~~~~~~~~~~~~v~l~-v~R~g~ 94 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTH-AEAVKALKGSKKLVLS-VYSAGR 94 (101)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCH-HHHHHHSSSSSSCCEE-ECCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCH-HHHHHhhcCCCeEEEE-EEECCc
Confidence 38999999999999999999999999999999999987 5567766667788888 577775
No 123
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.58 E-value=1.1e-07 Score=82.86 Aligned_cols=65 Identities=26% Similarity=0.327 Sum_probs=48.1
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVG 636 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~ 636 (775)
.+++|..|.++|||++ + |+.||+|++|||+++. ++.++..++... ++.+.++|.|+|+...+.++
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~------~~~v~l~v~r~g~~~~~~v~ 91 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS------KGKLKMVVQRDERATLLNVP 91 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT------TTEEEEEEEC----------
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCcEEEEEEeCCceeeeeCC
Confidence 4667999999999998 6 9999999999999999 999998887531 35899999999988776654
No 124
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.58 E-value=9.3e-08 Score=85.84 Aligned_cols=58 Identities=21% Similarity=0.308 Sum_probs=52.2
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++||++||.|++|||+++.+ ++++.++++. ++.++|+ +.|+..
T Consensus 41 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~---~~~v~l~-v~r~~~ 100 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT---AREISMR-VRFFSG 100 (104)
T ss_dssp CCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH---SSSEEEE-EECCCC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---CCEEEEE-EEECCC
Confidence 38999999999999999999999999999999999 9999999997 6789888 566544
No 125
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.57 E-value=2.6e-08 Score=89.06 Aligned_cols=62 Identities=19% Similarity=0.320 Sum_probs=52.4
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeEE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKPR 737 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~~ 737 (775)
.|++|..|.++|||+++||++||.|++|||+++.+ ++++.+.++. .++.+.|++..+++...
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~~~ 93 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK--GGDQTTLLVLDKEAESI 93 (102)
T ss_dssp SSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH--STTEEEEEECSTTCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCCceE
Confidence 38999999999999999999999999999999998 5889988887 38899999433344433
No 126
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.57 E-value=9.9e-08 Score=86.07 Aligned_cols=60 Identities=20% Similarity=0.232 Sum_probs=53.7
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++. .++.++|. +.|+++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~~~ 106 (108)
T 2jre_A 44 TGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN--AGNPVRLL-LIRRLPL 106 (108)
T ss_dssp CCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH--HCSEEEEE-EEECCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCcC
Confidence 489999999999999999 99999999999999998 6889988887 47899999 6777753
No 127
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.57 E-value=1.5e-07 Score=83.93 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=53.4
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.|++|..|.++|||+++| |++||.|++|||+++.+ +.++...++. .++.++|. +.|++.+
T Consensus 34 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~~ 96 (102)
T 2i1n_A 34 PGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE--AGPVVRLV-VRRRQPP 96 (102)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH--SCSEEEEE-EEEECCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCCC
Confidence 499999999999999999 99999999999999977 7888888887 47899999 6777754
No 128
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.57 E-value=1.2e-07 Score=84.44 Aligned_cols=53 Identities=30% Similarity=0.466 Sum_probs=48.8
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~ 729 (775)
|++|++|.+||||+++| |++||.|++|||+++.+ ++++.+.++.. ++.++|++
T Consensus 37 gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~--~~~v~L~V 92 (97)
T 2ejy_A 37 SCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET--KGMISLKV 92 (97)
T ss_dssp CEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC--CEEEEEEE
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEE
Confidence 89999999999999999 99999999999999996 99999999983 56788874
No 129
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.55 E-value=2e-07 Score=82.50 Aligned_cols=60 Identities=17% Similarity=0.274 Sum_probs=52.9
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++. .++.++|. +.|+++.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQM--AGETVTLK-IKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEE-EECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCCC
Confidence 388999999999999999 99999999999999974 6899988884 58899999 6777753
No 130
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.55 E-value=3.4e-08 Score=88.60 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=54.4
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
+++|..|.++|||+++||++||+|++|||+++.+ ++++.++++.. ++.++|. +.|+++.
T Consensus 30 ~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~--g~~v~l~-v~R~g~~ 90 (103)
T 1v5l_A 30 PLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA--SYQLCLK-IDRAETR 90 (103)
T ss_dssp EEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC--CSEEECE-ECCCTTT
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEE-EEECCeE
Confidence 7899999999999999999999999999999999 99999999983 8999999 6788764
No 131
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.55 E-value=3.8e-08 Score=91.59 Aligned_cols=67 Identities=18% Similarity=0.176 Sum_probs=61.6
Q ss_pred ceEEEEEcCCCHHhHcCC-CCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEe
Q 004068 675 GVYVARWCHGSPVHRYGL-YALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQ 743 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL-~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~ 743 (775)
+++|..|.+||||+++|| ++||.|++|||+++.+ ++++.+.++. ..|+.+.|. +.|+|+.+.+++++
T Consensus 34 ~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~-v~R~g~~~~~~~~~ 103 (127)
T 1b8q_A 34 PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRG-IASETHVVL-ILRGPEGFTTHLET 103 (127)
T ss_dssp CEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHS-CCSSCEEEE-EECCCCSEEECCCC
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEE-EEeCCceEEEEEEE
Confidence 889999999999999999 9999999999999999 9999999998 468899999 78999988877765
No 132
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.55 E-value=7e-09 Score=96.64 Aligned_cols=70 Identities=20% Similarity=0.150 Sum_probs=61.2
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeEEE--EEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKPRV--LTLKQDL 745 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~--ltlk~d~ 745 (775)
.|++|..|.++|||+++||++||.|++|||+++.+ ++++.++++.. .++.+.|. +.|+|+.+. +++++..
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~-v~R~g~~~~~~~~l~~~~ 106 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLV-VDRETDEFFKKCRVIPSQ 106 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTT-CSEEEEEE-ECHHHHHHHHHHTCCCCH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCEEEEE-EEeCCcceEEEEEEEecc
Confidence 38999999999999999999999999999999999 99999999985 67888888 788888766 5555543
No 133
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.55 E-value=5.7e-08 Score=87.08 Aligned_cols=61 Identities=11% Similarity=0.100 Sum_probs=53.3
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++..+.++.++|+ +.|++.
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~~~ 97 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLT-VRRKVL 97 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEE-EEEECC
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEE-EEeCCC
Confidence 378999999999999999 99999999999999965 89999999885447899999 566654
No 134
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.55 E-value=2.2e-07 Score=81.46 Aligned_cols=58 Identities=21% Similarity=0.371 Sum_probs=50.3
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ +.++...++. .+..++|+ +.|+|
T Consensus 33 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~g 93 (94)
T 2fe5_A 33 NSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN--TSDMVYLK-VAKPG 93 (94)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT--CCSEEEEE-EECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEcCC
Confidence 489999999999999999 99999999999999988 4777777776 35688888 56765
No 135
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.55 E-value=2e-07 Score=82.00 Aligned_cols=59 Identities=24% Similarity=0.347 Sum_probs=50.9
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++| |++||.|++|||+++.+ +.+....++. .++.++|. +.|+++
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~ 90 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA--SGERVNLT-IARPGK 90 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEE-EEEESC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEE-EEcCCc
Confidence 389999999999999999 99999999999999976 5667777765 48999999 567664
No 136
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.55 E-value=1.6e-07 Score=81.91 Aligned_cols=57 Identities=26% Similarity=0.384 Sum_probs=47.9
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHH--HHHHHHHhcCCCCEEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLE--AFVNVTKEIEHGEFVRVRTVHLN 733 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~--~f~~~v~~i~~g~~V~L~~V~Rd 733 (775)
.|++|..|.++|||+++||++||.|++|||+++.++. ++...++. .++.++|. +.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAE--SGNKLDLV-ISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT--STTEEEEE-EEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEE-EEeC
Confidence 3899999999999999999999999999999999974 44455554 47889988 5664
No 137
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.54 E-value=1.9e-07 Score=84.52 Aligned_cols=55 Identities=24% Similarity=0.387 Sum_probs=50.3
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVH 731 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~ 731 (775)
|++|..|.++|||+++||++||+|++|||+++.++ +++.+.++. .++.++|+++.
T Consensus 46 gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~~ 102 (109)
T 1q3o_A 46 LQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVM 102 (109)
T ss_dssp SEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHH--TTTEEEEEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEE
Confidence 89999999999999999999999999999999999 999999987 37788888543
No 138
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=9.7e-08 Score=84.03 Aligned_cols=58 Identities=21% Similarity=0.143 Sum_probs=50.6
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++||++||.|++|||+++.++ .++...++. .++.+.|+ +.|+++
T Consensus 33 ~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~g~ 92 (94)
T 2eeg_A 33 PLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG--CHDHLTLS-VSSGPS 92 (94)
T ss_dssp CCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT--CCSCEEEE-EECCSS
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCC
Confidence 78999999999999999999999999999999985 677777776 47789998 677765
No 139
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.53 E-value=7.6e-08 Score=86.53 Aligned_cols=59 Identities=24% Similarity=0.309 Sum_probs=52.3
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHH--HHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLE--AFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~--~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.+||||+++||++||.|++|||+++.++. ++.+.++. .++.++|. +.|++.
T Consensus 26 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~r~~~ 86 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLL-VLDGDS 86 (106)
T ss_dssp CSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHH--TTTEEEEE-EECHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEE-EEECCe
Confidence 3899999999999999999999999999999999886 89999885 47899998 566654
No 140
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=3.9e-08 Score=89.15 Aligned_cols=68 Identities=22% Similarity=0.300 Sum_probs=57.9
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQD 744 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d 744 (775)
.|++|..|.++|||+++| |++||.|++|||+++. ++.++...++. .++.++|. +.|++....+++++.
T Consensus 36 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~~~~~~~~v~~~ 106 (110)
T 1um1_A 36 PGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH--GGKKMRFL-VAKSDVETAKKIHSG 106 (110)
T ss_dssp SSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT--CCSEEEEE-EECCCHHHHHHHSSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCcceeEEEEec
Confidence 489999999999999999 9999999999999997 47778877776 48899999 688887766665543
No 141
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.53 E-value=1.3e-07 Score=85.16 Aligned_cols=62 Identities=13% Similarity=0.194 Sum_probs=53.5
Q ss_pred CCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 673 GHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 673 ~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
..+++|..|.++|||+ +||++||.|++|||+++.++.++..++...+.++.++|. +.|+|+.
T Consensus 38 ~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~-v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKIT-IRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEE-EEEESCC
T ss_pred CCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEE-EEECCCC
Confidence 3489999999999999 999999999999999999998887776554678999999 5777653
No 142
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.53 E-value=2.6e-07 Score=107.65 Aligned_cols=88 Identities=16% Similarity=0.165 Sum_probs=77.4
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeCCCCCCceeE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQDLHYWPTWEL 753 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d~~y~pt~e~ 753 (775)
.|++|..|.+||||+++||++||.|++|||++| +.++|.++++..++|+.|+|+ +.|+|+.+.+++++...--.++.|
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~-v~R~g~~~~~~v~l~~~~~~~~~l 573 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIH-AFRRDELMTLELTWQEPAKSSYVL 573 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEE-EEETTEEEEEEEECCCCCCCEEEE
T ss_pred CeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEE-EEECCEEEEEEEEecCCCCceEEE
Confidence 389999999999999999999999999999999 689999999987789999999 789999999999998877678888
Q ss_pred EecCC--CCCcE
Q 004068 754 IFDPD--TALWR 763 (775)
Q Consensus 754 ~~~~~--~~~W~ 763 (775)
..++. -..|-
T Consensus 574 ~~~~~~~~~~wl 585 (597)
T 4fgm_A 574 SVEQPDKLKGWL 585 (597)
T ss_dssp EESCGGGSTTSS
T ss_pred EECCHHHHHhhh
Confidence 87652 34563
No 143
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.53 E-value=1.7e-07 Score=87.97 Aligned_cols=110 Identities=16% Similarity=0.141 Sum_probs=75.1
Q ss_pred CCeEEEEEEecCeEEEEEEEecccCCCC--cceeeeeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcC-CC
Q 004068 617 NGKLDITIFRQGREIELQVGTDVRDGNG--TTRVINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYG-LY 693 (775)
Q Consensus 617 g~~v~l~V~R~Gk~~~l~V~l~~~~~~~--t~r~v~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aG-L~ 693 (775)
...+.....+++......+.+....... .......+|+.+..-. ..+....+++|..|.++|||+++| |+
T Consensus 13 ~~p~~~~~~~~~~~~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~-------~~~~~~~gv~V~~V~~gspA~~aG~L~ 85 (131)
T 1wfg_A 13 KHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGK-------MTESGRLCAFITKVKKGSLADTVGHLR 85 (131)
T ss_dssp CCSCEEEECSSSSEEEEEEEEECSCTTSCCCSCSCTTTTEEEEEEE-------ECSSSCEEEEEEEECTTSHHHHTSCCC
T ss_pred CCCCcccCCCCCCceeeEEEEeccceeEEEecCCCCCCCEEEecCc-------cCCCCCCCEEEEEECCCChHHHcCCCC
Confidence 3456777777887766666655431100 0011123455442100 001112389999999999999999 99
Q ss_pred CCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 694 ALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 694 ~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
+||.|++|||+++.+ ++++.++++....++.++|+ +.|++
T Consensus 86 ~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~g 127 (131)
T 1wfg_A 86 PGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELV-VSRSG 127 (131)
T ss_dssp TTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEE-EEEEC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE-EEcCC
Confidence 999999999999975 59999999997678999999 56655
No 144
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=1.6e-07 Score=86.35 Aligned_cols=59 Identities=20% Similarity=0.291 Sum_probs=52.9
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.+||||+++| |++||.|++|||+++. +++++.+.++. .++.++|+ +.|++.
T Consensus 54 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~~ 115 (117)
T 2byg_A 54 NSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN--TSEVVYLK-VGKPTT 115 (117)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEE-EEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCc
Confidence 489999999999999999 9999999999999999 88999999986 37899999 566654
No 145
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.52 E-value=1.7e-07 Score=81.59 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=48.5
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
|++|..|.+||||+++| |++||.|++|||+++ .+++++.+.++.. +..++|++
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~--~~~v~L~v 77 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS--RGKLQLVV 77 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEE
Confidence 78999999999999999 999999999999999 8999999999983 45788874
No 146
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.52 E-value=4.4e-08 Score=89.21 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=56.4
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLK 742 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk 742 (775)
.|++|..|.++|||+++| |++||.|++|||+++.+ +.++...++. .++.++|. +.|++....++++
T Consensus 35 ~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~~~~~~v~ 103 (113)
T 2g5m_B 35 LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFM-IGRERPGEQSEVA 103 (113)
T ss_dssp EEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH--SCSSCEEE-EEECCCCTTSSCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEE-EEeCCCCCcchhh
Confidence 489999999999999999 99999999999999985 6778888887 37889999 6888876554444
No 147
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.52 E-value=1.9e-07 Score=83.13 Aligned_cols=59 Identities=25% Similarity=0.356 Sum_probs=51.4
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++| |++||.|++|||+++.++ .++.+.++. .++.++|+ +.|++.
T Consensus 37 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~ 98 (101)
T 2jik_A 37 SGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN--AGYAVSLR-VQHRLE 98 (101)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT--CCSEEEEE-EEEESC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEE-EEeCCC
Confidence 489999999999999999 999999999999999885 778888876 37889998 567654
No 148
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.52 E-value=1.3e-07 Score=82.49 Aligned_cols=60 Identities=27% Similarity=0.341 Sum_probs=51.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCeEE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGREI 631 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~ 631 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++. ++..++.. .++.+.++|.|+|+.+
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG------CTDNLTLTVARSEHES 89 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT------CSSEEEEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEECCccc
Confidence 46679999999999986 9999999999999999998 77776643 2688999999998764
No 149
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=2.1e-07 Score=83.38 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=51.7
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++| |++||+|++|||+++.+ +.++.+.++. .++.++|+ +.|+|+
T Consensus 39 ~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~g~ 99 (104)
T 2djt_A 39 PLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA--GGPQLHLV-IRRPLS 99 (104)
T ss_dssp CCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH--TCSEEEEE-ECCCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEECCC
Confidence 78999999999999999 99999999999999988 5788888877 48899998 677775
No 150
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.51 E-value=1.4e-07 Score=82.04 Aligned_cols=60 Identities=28% Similarity=0.320 Sum_probs=51.4
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |++||+|++|||++| .++.++..++....+ ++.+.++|.|+|+
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~----g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQE----TGHLVMDVRRYGK 90 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHH----HTEEEEEEEEEC-
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCC----CCEEEEEEEeCCC
Confidence 45679999999999996 999999999999999 899999988865432 6789999999874
No 151
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.51 E-value=1.8e-07 Score=83.61 Aligned_cols=55 Identities=24% Similarity=0.267 Sum_probs=51.1
Q ss_pred ceEEEEEcCCCHHhH-cCCCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHR-YGLYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~-aGL~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
+++|..|.++|||++ +||++||.|++|||+++ .+++++.+.++..+.++.++|++
T Consensus 38 ~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v 95 (101)
T 2yt7_A 38 TAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSI 95 (101)
T ss_dssp CEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEE
Confidence 789999999999999 67999999999999999 89999999999866789999984
No 152
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.51 E-value=7.6e-08 Score=89.88 Aligned_cols=58 Identities=10% Similarity=0.206 Sum_probs=53.9
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeC
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLN 733 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rd 733 (775)
+++|..|.+||||+++| |++||+|++|||+++. +++++.++++..+.|+.++|+ +.|+
T Consensus 50 ~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~-V~R~ 110 (126)
T 1wif_A 50 YLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIK-AYRG 110 (126)
T ss_dssp EEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEE-EESS
T ss_pred cEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEE-EEEC
Confidence 78999999999999999 9999999999999995 899999999987789999999 5776
No 153
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.51 E-value=3.7e-08 Score=89.86 Aligned_cols=65 Identities=26% Similarity=0.355 Sum_probs=53.0
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHH--HHHHHHhcCCCCEEEEEEEEeC-CeEEEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEA--FVNVTKEIEHGEFVRVRTVHLN-GKPRVLTLK 742 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~--f~~~v~~i~~g~~V~L~~V~Rd-g~~~~ltlk 742 (775)
.|++|..|.++|||+++||++||.|++|||+++.++.. +...++. ++.+.|+ +.|+ |+.++++++
T Consensus 41 ~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~---~~~v~l~-v~r~~g~~~~~~~~ 108 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKS---SRSLTIS-IVAAAGRELFMTDR 108 (114)
T ss_dssp CSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHH---CSSEEEE-ECSSTTTHHHHSSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc---CCeEEEE-EEcCCCCceEEEec
Confidence 38999999999999999999999999999999999853 6666765 3578888 5777 765544443
No 154
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.51 E-value=3.1e-07 Score=81.07 Aligned_cols=53 Identities=28% Similarity=0.387 Sum_probs=48.8
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~ 729 (775)
+++|..|.++|||+++||++||.|++|||+++.+ ++++.+.++.. +..++|++
T Consensus 38 ~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v 92 (96)
T 2ego_A 38 VTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS--GNVLRLET 92 (96)
T ss_dssp EEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEE
T ss_pred CeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEE
Confidence 8899999999999999999999999999999999 69999999984 45888884
No 155
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.50 E-value=2.2e-07 Score=84.31 Aligned_cols=60 Identities=17% Similarity=0.149 Sum_probs=53.7
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcC--CCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIE--HGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~--~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++| |++||.|++|||+++.+ ++++++.++..+ .++.++|. +.|++.
T Consensus 42 ~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~-v~R~~~ 106 (109)
T 1wi4_A 42 LVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIA-FIRSGP 106 (109)
T ss_dssp SEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEE-EECCCC
T ss_pred CEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEE-EEeCCC
Confidence 78999999999999999 99999999999999987 899999999854 47888888 577664
No 156
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.50 E-value=1.9e-07 Score=87.07 Aligned_cols=60 Identities=22% Similarity=0.327 Sum_probs=54.8
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++. .++.++|. +.|+|+.
T Consensus 46 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~-v~R~~~~ 108 (129)
T 2dmz_A 46 SGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN--AGQVVHLT-LVRRKTS 108 (129)
T ss_dssp CEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH--CCSSEEEE-EEEESSS
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCcc
Confidence 489999999999999999 99999999999999999 9999999998 58889999 6777653
No 157
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.50 E-value=2.8e-07 Score=86.11 Aligned_cols=59 Identities=15% Similarity=0.107 Sum_probs=53.5
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
+++|..|.++|||+++| |++||.|++|||+++. +++++.+.++..+.|+.++|+ +.|++
T Consensus 44 ~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~~ 105 (129)
T 2kpk_A 44 FLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLE-LCRGY 105 (129)
T ss_dssp EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEE-EEECS
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEE-EEeCC
Confidence 78999999999999999 9999999999999998 478999999997668899999 56665
No 158
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.50 E-value=2.1e-07 Score=84.97 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=52.5
Q ss_pred ceEEEEEcCCCHHhHcCC-CCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYGL-YALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL-~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
+++|..|.++|||+++|| ++||.|++|||+++. +++++.+.++.. +..++|+ +.|+++.
T Consensus 49 gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~-v~r~~~~ 110 (113)
T 1va8_A 49 SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM--HGTLTFV-LIPSSGP 110 (113)
T ss_dssp SEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--CEEEEEE-EECCCCC
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEE-EEECCcc
Confidence 899999999999999999 999999999999999 788999999873 4578888 5677764
No 159
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.50 E-value=2.3e-07 Score=78.64 Aligned_cols=76 Identities=22% Similarity=0.281 Sum_probs=56.4
Q ss_pred EEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHh
Q 004068 534 VELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQA 609 (775)
Q Consensus 534 ve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~ 609 (775)
+.+..+.......+|++.. .+++|..|.++|||++ + |++||+|++|||+++. ++.++..++..
T Consensus 2 ~~~~~~~~~~~~~~g~~~~-------------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 68 (81)
T 2rcz_A 2 SKVTLVKSRKNEEYGLRLA-------------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIER 68 (81)
T ss_dssp EEEEEECCSTTCCCCEEEE-------------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eEEEEEECCCCCCCCEEEe-------------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHC
Confidence 3444455555555665421 4567999999999987 7 9999999999999999 99999888753
Q ss_pred cCCCCCCCCeEEEEEEecC
Q 004068 610 LDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 610 ~~~~~~~g~~v~l~V~R~G 628 (775)
. ++.+.++|.|+|
T Consensus 69 ~------~~~v~l~v~R~g 81 (81)
T 2rcz_A 69 S------KGKLKMVVQRDE 81 (81)
T ss_dssp S------TTEEEEEEEC--
T ss_pred C------CCeEEEEEEeCC
Confidence 2 348899998875
No 160
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.50 E-value=8.1e-08 Score=87.70 Aligned_cols=64 Identities=20% Similarity=0.237 Sum_probs=55.9
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCeEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGKPRVLT 740 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~lt 740 (775)
.|++|..|.++|||+++||++||.|++|||+++.++ +++.+.++. .|+.++|+ +.|+++...++
T Consensus 38 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~~~~~~~ 103 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLL-VLDGDSYEKAV 103 (114)
T ss_dssp CSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHH--TCSEEEEE-EECHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEE-EEECCcceehh
Confidence 489999999999999999999999999999999885 899999987 38999999 67877654443
No 161
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.49 E-value=2.8e-08 Score=112.12 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=77.4
Q ss_pred eeeeeeecCChhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEE
Q 004068 650 NWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 650 ~~~G~~lq~p~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
.|+|+.++......++...++. ..|++|..|.++|||+++||++||+|++|||+++.++.+|...+...+.|+.++|+
T Consensus 263 ~~LGv~~~~~~~~~a~~lgl~~-~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~- 340 (448)
T 1ky9_A 263 GELGIMGTELNSELAKAMKVDA-QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLG- 340 (448)
T ss_dssp CCCCCSCCCTTSHHHHTSCCTT-CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEE-
T ss_pred eccccccccccHHHHHHhCCCC-CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEE-
Confidence 4678888877766666433442 35999999999999999999999999999999999999999999876679999999
Q ss_pred EEeCCeEEEEEEEeC
Q 004068 730 VHLNGKPRVLTLKQD 744 (775)
Q Consensus 730 V~Rdg~~~~ltlk~d 744 (775)
+.|+|+...+++++.
T Consensus 341 v~R~g~~~~~~v~~~ 355 (448)
T 1ky9_A 341 LLRDGKQVNVNLELQ 355 (448)
T ss_dssp EESSSCEEECCCC--
T ss_pred EEECCEEEEEEEEEe
Confidence 689999988877654
No 162
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.49 E-value=2.9e-07 Score=87.32 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=53.4
Q ss_pred cceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecc
Q 004068 565 RQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDV 639 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~ 639 (775)
..+++|..|.++|||+++ |++||+|++|||++|. ++.++..++.. . .++.+.++|.|+|+...+.+.+..
T Consensus 63 ~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~-~----~g~~v~l~v~R~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 63 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTK-R----SEEVVRLLVTRQSLQKAVQQSMLS 135 (139)
T ss_dssp CCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCC-T----TCSEEEEEEEECC-------CCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHh-C----CCCEEEEEEEECCEEEEEEEeece
Confidence 357779999999999996 9999999999999999 57888888743 2 368899999999998887776554
No 163
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.49 E-value=1.6e-07 Score=84.75 Aligned_cols=60 Identities=17% Similarity=0.277 Sum_probs=54.1
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.|++|..|.++|||+++| |++||.|++|||+++. ++.++...++. .++.++|. +.|++.+
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~~ 104 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLL-LEKGQSP 104 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHH--TTSEEEEE-EECCCCS
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCcc
Confidence 489999999999999999 9999999999999998 77889999987 37899999 6787764
No 164
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.49 E-value=5.4e-08 Score=88.03 Aligned_cols=55 Identities=20% Similarity=0.155 Sum_probs=45.4
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHL 732 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~R 732 (775)
|++|..|.+||||+++| |++||.|++|||+++.+. ++....++. .++.+.|. +.|
T Consensus 26 gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R 83 (106)
T 2la8_A 26 GCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG--ANGKVSME-VTR 83 (106)
T ss_dssp SEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS--CBSCEEEE-EEE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEE-EEe
Confidence 89999999999999999 999999999999999863 444455554 45679998 455
No 165
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.48 E-value=3.9e-07 Score=81.98 Aligned_cols=57 Identities=18% Similarity=0.144 Sum_probs=51.0
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
+++|..|.++|||+++||++||+|++|||+++. +++++.+.++. .++.+.|+ +.|.+
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~r~~ 102 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA--GEKELILT-VLSVE 102 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEE-EECSS
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEE-EEcCC
Confidence 567999999999999999999999999999999 88999999997 48899998 45543
No 166
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.48 E-value=1.2e-07 Score=87.56 Aligned_cols=60 Identities=20% Similarity=0.186 Sum_probs=52.4
Q ss_pred ceEEEEEcCCCHHhHc-CCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeEE
Q 004068 675 GVYVARWCHGSPVHRY-GLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKPR 737 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~a-GL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~~ 737 (775)
+++|..|.++|||+++ ||++||.|++|||+++.+ +.+....++.. +..++|+ +.|+|...
T Consensus 54 ~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~--~~~v~l~-v~r~g~~~ 116 (120)
T 2iwo_A 54 PIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA--SGSIEMQ-VVAGGDVS 116 (120)
T ss_dssp EEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC--CSEEEEE-EECCTTSS
T ss_pred CEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEE-EEECCccc
Confidence 7899999999999999 999999999999999987 68888888873 5669998 67887643
No 167
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.48 E-value=3.4e-07 Score=79.98 Aligned_cols=58 Identities=24% Similarity=0.251 Sum_probs=49.6
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.|++|..|.++|||+++| |++||.|++|||+++.+. +++...++. .++.++|+ +.|.+
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~~ 89 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC--SLGTVTLE-VGRIS 89 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEE-EECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEccc
Confidence 389999999999999999 999999999999999764 677777776 47789998 56654
No 168
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.47 E-value=4.5e-07 Score=84.48 Aligned_cols=66 Identities=21% Similarity=0.346 Sum_probs=55.3
Q ss_pred ceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecc
Q 004068 566 QVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDV 639 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~ 639 (775)
.+++|..|.++|||+++|++||+|++|||++|.+|.++...+.... .++.+.++| |+|+ +++.+..
T Consensus 25 ~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~dl~~~l~~~~----~g~~v~l~V-R~g~---~~v~l~~ 90 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTTYSAALKTIS----VGEVINITT-DQGT---FHLKTGR 90 (125)
T ss_dssp CCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHHHHHHHTTCC----TTCEEEEEE-TTEE---EEEECCB
T ss_pred CceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHHHHHHHHhcC----CCCEEEEEE-ECCE---EEEEEec
Confidence 5677999999999998899999999999999999999999885433 367899999 9987 5555543
No 169
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.47 E-value=1.8e-07 Score=94.86 Aligned_cols=70 Identities=24% Similarity=0.268 Sum_probs=59.1
Q ss_pred CceEEEEEcCCCHHhHcCCCCC-CEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCC--eEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYGLYAL-QWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNG--KPRVLTLKQD 744 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~G-D~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg--~~~~ltlk~d 744 (775)
.|++|..|.++|||++|||++| |+|++|||+++.++.++...+.....++.++|+ +.|++ +...+++.+.
T Consensus 16 ~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~-v~R~~~~~~~~v~l~p~ 88 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKML-IYSSKTLELRETSVTPS 88 (209)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEE-EEETTTCCEEEEEECCC
T ss_pred CEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEE-EEecCCceEEEEEEccc
Confidence 4999999999999999999999 999999999999998887666555678999999 56764 5666666544
No 170
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.47 E-value=1.6e-07 Score=83.75 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=50.3
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++||++||+|++|||+++.+ ++++.+.++.. +..++|+ +.|++.
T Consensus 37 ~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~-v~R~~~ 96 (100)
T 1whd_A 37 PVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC--PSEIILL-VWRVSG 96 (100)
T ss_dssp SCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHC--SSEEEEE-EEECCS
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEE-EEECCC
Confidence 7899999999999999999999999999999994 68999999873 4558888 567654
No 171
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.46 E-value=1.2e-07 Score=87.19 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=52.6
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeEE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKPR 737 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~ 737 (775)
.|++|..|.++|||+++| |++||+|++|||+++. +++++.+.++.. .++.+.+. +.|+++..
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~-v~R~~~~~ 106 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA-REPRQAVI-VTRKLTPE 106 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT-TSSSEEEE-EEECCCSS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEE-EEcCCCcc
Confidence 489999999999999999 9999999999999998 688999999884 35555565 67877643
No 172
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=3.1e-07 Score=80.52 Aligned_cols=53 Identities=26% Similarity=0.347 Sum_probs=48.7
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeC-CCHHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRT-PDLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV-~dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
+++|..|.++|||+++| |++||.|++|||+++ .+++++.+.++. .++.++|++
T Consensus 30 ~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~--~~~~v~l~v 84 (91)
T 2e7k_A 30 ELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRN--ASGSVILKI 84 (91)
T ss_dssp SEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHT--CCSSBCEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHc--CCCeEEEEE
Confidence 89999999999999987 999999999999999 999999999997 366788884
No 173
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=2.6e-07 Score=82.99 Aligned_cols=58 Identities=21% Similarity=0.377 Sum_probs=51.6
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++. .++.++|+ +.|++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~ 98 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA--ASPTIALL-LEREA 98 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS--CCSCEEEE-EEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEECC
Confidence 489999999999999999 99999999999999988 8899888886 37889998 56654
No 174
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.45 E-value=4.6e-07 Score=81.45 Aligned_cols=59 Identities=20% Similarity=0.316 Sum_probs=52.1
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+++| |++||.|++|||+++. ++.++...++. .++.++|+ +.|++.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~ 99 (106)
T 3axa_A 38 LGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR--TSSVVTLE-VAKQGA 99 (106)
T ss_dssp EEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEE-EECCCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCc
Confidence 389999999999999999 9999999999999998 47788888876 58899999 677765
No 175
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.45 E-value=3.9e-07 Score=80.30 Aligned_cols=62 Identities=11% Similarity=0.162 Sum_probs=52.4
Q ss_pred cceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 565 RQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
..+++|..|.++|||+++ |++||+|++|||++|.++.++........ .++.+.++|.|+|+.
T Consensus 33 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~----~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 33 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG----AGTAVQMRVWRERET 95 (97)
T ss_dssp BCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT----SCSEEEEEEECCSSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC----CCCeEEEEEEeCCcc
Confidence 356779999999999986 99999999999999999988776554333 378999999999864
No 176
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.45 E-value=4.6e-07 Score=82.51 Aligned_cols=60 Identities=27% Similarity=0.384 Sum_probs=51.7
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.|++|..|.++|||+++| |++||+|++|||+++.+ +.++.+.++. .++.++|. +.|++..
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~~~ 111 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN--GGRRVRLF-LKRGETS 111 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEE-EECCEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCcc
Confidence 389999999999999999 99999999999999976 4777777776 47889998 6777653
No 177
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.45 E-value=9.8e-08 Score=81.89 Aligned_cols=56 Identities=18% Similarity=0.185 Sum_probs=49.0
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLN 733 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rd 733 (775)
+++|..|.++|||+++||++||.|++|||+++.++ +++.+.++. .++.++|. +.|+
T Consensus 24 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~-v~R~ 81 (83)
T 2kv8_A 24 PCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGK--CSGVLHMV-IAEG 81 (83)
T ss_dssp SCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTT--CSSCEEEE-EECC
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEE-EEcC
Confidence 78999999999999999999999999999999999 888888876 35668888 5554
No 178
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.45 E-value=2.4e-07 Score=85.07 Aligned_cols=58 Identities=22% Similarity=0.189 Sum_probs=52.6
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++| |++||.|++|||+++ .+++++.++++. .++.++|+ +.|+++
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~r~~~ 103 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS--ISEKVRLE-ILPVPQ 103 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS--CSSEEEEE-ECCBTT
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEE-EEECCC
Confidence 58999999999999999 999999999999999 779999999995 58999999 566654
No 179
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.45 E-value=3.9e-07 Score=85.03 Aligned_cols=58 Identities=17% Similarity=0.325 Sum_probs=52.0
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
|++|+.|.+||||+++| |++||.|++|||+++ .+++++.+.++.. ++.++|+ +.|+++
T Consensus 66 gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~--~~~v~l~-v~r~~~ 126 (128)
T 1nf3_C 66 GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIAN--SRNLIIT-VRPANQ 126 (128)
T ss_dssp EEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHT--TTSEEEE-EECCCC
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEE-EEECCc
Confidence 89999999999999999 899999999999999 7899999999873 5569998 677764
No 180
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.45 E-value=4.8e-07 Score=79.32 Aligned_cols=51 Identities=22% Similarity=0.305 Sum_probs=47.1
Q ss_pred EEEEEcCCCHHhHcCCCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEE
Q 004068 677 YVARWCHGSPVHRYGLYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 677 ~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
+|.+|.++|||+++||++||.|++|||+++ .+++++.+.+++ .++.++|++
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v 86 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSN--AVGEIHMKT 86 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHH--CCEEEEEEE
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEE
Confidence 899999999999999999999999999999 589999999997 378888884
No 181
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.45 E-value=3.2e-07 Score=84.22 Aligned_cols=59 Identities=20% Similarity=0.292 Sum_probs=52.6
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++. .++.++|+ +.|++..
T Consensus 50 g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~~v~l~-v~R~~~~ 111 (117)
T 1ujd_A 50 GAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ--QSGEAEIC-VRLDLNM 111 (117)
T ss_dssp EEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC--CSSCEEEE-EESSCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCEEEEE-EEECCcc
Confidence 88999999999999999 99999999999999976 6888888887 47889998 6787753
No 182
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.44 E-value=2.4e-07 Score=84.52 Aligned_cols=59 Identities=24% Similarity=0.297 Sum_probs=53.4
Q ss_pred ceEEEEEcCCCHHhH-cCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHR-YGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~-aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
+++|..|.++|||++ +||++||.|++|||+++.+ ++++.++++. .++.+.|+ +.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD--AGLSVTLR-IIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH--TTTEEEEE-ECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCcC
Confidence 569999999999999 9999999999999999999 6999999998 58999999 6777653
No 183
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.43 E-value=6.4e-07 Score=78.51 Aligned_cols=53 Identities=19% Similarity=0.277 Sum_probs=48.6
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
+++|..|.+||||+++| |++||.|++|||+++ .+++++.+.++.. +..++|++
T Consensus 29 ~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v 84 (93)
T 3o46_A 29 AIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS--QGAITFKI 84 (93)
T ss_dssp CEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC--CEEEEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEE
Confidence 78999999999999999 999999999999999 8999999999983 34888884
No 184
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.42 E-value=5e-07 Score=79.41 Aligned_cols=59 Identities=20% Similarity=0.366 Sum_probs=50.9
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.+++|..|.++|||+++| |++||+|++|||+++.++ .++.+.++. .++.++|. +.|+|+
T Consensus 33 ~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~r~g~ 94 (97)
T 2iwn_A 33 SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH--TGQTVLLT-LMRRGE 94 (97)
T ss_dssp CCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT--CCSEEEEE-EEEEEE
T ss_pred CCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCC
Confidence 489999999999999999 999999999999999965 677777776 58899998 567664
No 185
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.42 E-value=1.5e-07 Score=87.31 Aligned_cols=66 Identities=18% Similarity=0.248 Sum_probs=53.0
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLK 742 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk 742 (775)
+++|..|.+||||+++| |++||.|++|||+++. +++++.+.++. . +..++|.+....+.+.+++++
T Consensus 46 ~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~-~-~~~v~l~v~r~~~~~~~~~~~ 114 (125)
T 3hpk_A 46 CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE-V-KGEVTIHYNKLQADPKQLEVL 114 (125)
T ss_dssp SEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH-S-CSEEEEEEEEECSCHHHHHHH
T ss_pred CEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C-CCeEEEEEEECCCCCceeeee
Confidence 78999999999999999 9999999999999998 78999999998 3 445888843324433333333
No 186
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.42 E-value=1.6e-07 Score=86.08 Aligned_cols=64 Identities=19% Similarity=0.133 Sum_probs=53.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIEL 633 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l 633 (775)
.+++|..|.++|||+++ |++||+|++|||++|.++.++...+.... .++.+.++|.|+++..++
T Consensus 42 ~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~----~g~~v~l~v~r~~~~~~~ 106 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQ----QCDTITILAQYNPHVHQL 106 (117)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTS----CCSEEEEEECCCSCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc----CCCeEEEEEEECCchhhh
Confidence 46779999999999996 99999999999999999988877754333 378899999998876543
No 187
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.41 E-value=2.5e-07 Score=84.46 Aligned_cols=60 Identities=20% Similarity=0.258 Sum_probs=52.8
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++| |++||+|++|||+++.+ ++++.+.++. .++.++|. +.|++..
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~-v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQ--TPQKVRLV-VYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHT--CCSEEEEE-EECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEE-EEeCCcc
Confidence 389999999999999999 99999999999999988 6888888886 34889998 6787764
No 188
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.41 E-value=5e-07 Score=103.59 Aligned_cols=93 Identities=19% Similarity=0.201 Sum_probs=75.7
Q ss_pred eeeeeeecCC-hhhHhhhCCCCCCCCceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHH----------HHHHHHHh
Q 004068 650 NWCGCIVQDP-HPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLE----------AFVNVTKE 718 (775)
Q Consensus 650 ~~~G~~lq~p-~~~vrql~~lps~~~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~----------~f~~~v~~ 718 (775)
.|+|+.++.. ....++...++. ..|++|..|.+||||+++ |++||+|++|||++|.+.. +|...+..
T Consensus 253 ~~LGv~~~~~~~~~~~~~~~l~~-~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~ 330 (539)
T 4fln_A 253 PCLGVLLQKLENPALRECLKVPT-NEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQ 330 (539)
T ss_dssp CBCCEEEEECCCHHHHHHHTCSS-SBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHT
T ss_pred eecceEEEecCCHHHHHhcCCCC-cCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHc
Confidence 5788888765 455555433543 459999999999999986 9999999999999996543 37788888
Q ss_pred cCCCCEEEEEEEEeCCeEEEEEEEeCC
Q 004068 719 IEHGEFVRVRTVHLNGKPRVLTLKQDL 745 (775)
Q Consensus 719 i~~g~~V~L~~V~Rdg~~~~ltlk~d~ 745 (775)
.+.|+.++|+ +.|+|+.+.++++...
T Consensus 331 ~~~Gd~v~l~-v~R~Gk~~~v~Vtl~~ 356 (539)
T 4fln_A 331 KFAGDIAEIG-IIRAGEHKKVQVVLRP 356 (539)
T ss_dssp SCTTCEEEEE-EEETTEEEEEEEECBC
T ss_pred CCCCCEEEEE-EEECCEEEEEEEEEcc
Confidence 8899999999 7899999999888764
No 189
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.41 E-value=2.8e-07 Score=82.66 Aligned_cols=53 Identities=23% Similarity=0.345 Sum_probs=48.4
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVR 728 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~ 728 (775)
.+++|..|.++|||+++||++||+|++|||+++. +++++.+.++.. +..++|+
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~ 102 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSS--GNLLTIE 102 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHT--TTEEEEE
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEE
Confidence 4899999999999999999999999999999999 889999999984 3477776
No 190
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=6e-07 Score=78.50 Aligned_cols=58 Identities=22% Similarity=0.273 Sum_probs=49.4
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.+++|..|.++|||+++| |++||+|++|||+++.+ ++++.+.++.. ++.++|. +.|++
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~--~~~v~l~-v~r~~ 90 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA--QGSVKLV-VRSGP 90 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC--CSEEEEE-ECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEE-EEeCC
Confidence 388999999999999996 99999999999999995 68888888873 4678888 55544
No 191
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.40 E-value=5.2e-07 Score=81.76 Aligned_cols=58 Identities=28% Similarity=0.338 Sum_probs=51.6
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
|++|..|.++|||+++| |++||+|++|||+++. +++++.+.++. .++.++|. +.|++.
T Consensus 39 g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~-v~R~~~ 99 (111)
T 2dlu_A 39 GVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRN--CGNSVRML-VARDPA 99 (111)
T ss_dssp SBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHH--HCSEEEEE-EEESCT
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEE-EEeCCC
Confidence 89999999999999999 9999999999999998 46899999987 37889998 567664
No 192
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.40 E-value=7.6e-07 Score=80.73 Aligned_cols=70 Identities=19% Similarity=0.345 Sum_probs=59.3
Q ss_pred ceEEEEEEcCCChHhhh-c-cCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEeccc
Q 004068 566 QVLRVKGCLAGSKAENM-L-EQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVR 640 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-L-q~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~ 640 (775)
.+++|..|.++|||+++ | +.||+|++|||+++.+ +.++..++... .++.+.++|.|+|+..++.+.+...
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~-----~g~~v~l~v~R~g~~~~~~~~~~~~ 99 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI-----ASETHVVLILRGPEGFTTHLETTFT 99 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHS-----CSSSEEEEEEECCTTSEEEEEEEEC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-----CCCcEEEEEEeCCcccceEeeeecc
Confidence 45679999999999985 7 9999999999999999 89998888653 2678999999999888887775543
No 193
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.39 E-value=5e-07 Score=84.14 Aligned_cols=58 Identities=17% Similarity=0.133 Sum_probs=52.6
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC---CHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP---DLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~---dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.|++|..|.++|||+++| |++||.|++|||+++. +++++.+.++. .++.++|. +.|+.
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~--~~~~v~l~-v~r~~ 115 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ--TTGSLRLI-VAREP 115 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH--CCSEEEEE-EEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc--CCCeEEEE-EEcCC
Confidence 389999999999999999 9999999999999998 89999999998 47889998 56654
No 194
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.39 E-value=7e-07 Score=82.29 Aligned_cols=55 Identities=15% Similarity=0.241 Sum_probs=50.2
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTV 730 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V 730 (775)
.|++|..|.+||||+++| |++||.|++|||+++. +++++.+.++. .++.++|++.
T Consensus 53 ~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~L~v~ 110 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR--TSSSIVLKAL 110 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS--CCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 489999999999999999 9999999999999999 89999999997 3678999853
No 195
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.39 E-value=3.8e-08 Score=106.75 Aligned_cols=68 Identities=19% Similarity=0.275 Sum_probs=0.0
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLKQDL 745 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk~d~ 745 (775)
.|++|..|.++|||+++||++||+|++|||+++.++++|.+.++. |+.++|+ +.|+|+.+.+++++.+
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~---~~~v~l~-v~R~g~~~~~~v~p~~ 321 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIKR---ESTLNMV-VRRGNEDIMITVIPEE 321 (332)
T ss_dssp ------------------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHhC---CCeEEEE-EEECCEEEEEEEEEee
Confidence 489999999999999999999999999999999999999999875 7889999 7899999988887654
No 196
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=5.7e-07 Score=81.35 Aligned_cols=63 Identities=11% Similarity=0.148 Sum_probs=51.9
Q ss_pred cceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEE
Q 004068 565 RQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREI 631 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~ 631 (775)
..+++|..|.++|||+++ |++||+|++|||++|.++.++........ .++.+.|+|.|+|+.+
T Consensus 45 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~----~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 45 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG----AGTAVQMRVWRESGPS 108 (110)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS----CCSEEEEEEEECSSCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC----CCCeEEEEEEECCccC
Confidence 356779999999999996 99999999999999999776665543333 3789999999998754
No 197
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.39 E-value=2.1e-07 Score=86.90 Aligned_cols=60 Identities=12% Similarity=0.262 Sum_probs=53.1
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhc-----CCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEI-----EHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i-----~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.+||||+++| |++||.|++|||+++.+ ++++++.++.. ++++.|+|. |.|++.
T Consensus 56 gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~-v~R~~~ 123 (127)
T 1wg6_A 56 GIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLV-ILRRSG 123 (127)
T ss_dssp EEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEE-EEECSC
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEE-EEeCCC
Confidence 89999999999999999 99999999999999987 66999999874 347899999 567654
No 198
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.39 E-value=6.6e-07 Score=79.91 Aligned_cols=57 Identities=21% Similarity=0.293 Sum_probs=48.6
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
|++|..|.++|||+++| |++||.|++|||+++. ++.++...++. .++.++|. +.|++
T Consensus 36 gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~r~~ 95 (104)
T 3i4w_A 36 GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN--AGQTVTII-AQYKP 95 (104)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT--SCSEEEEE-EEECH
T ss_pred CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEECc
Confidence 89999999999999999 9999999999999995 45666767765 57889988 56654
No 199
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.39 E-value=7.2e-07 Score=89.13 Aligned_cols=61 Identities=18% Similarity=0.209 Sum_probs=56.0
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.+++|..|.++|||+++| |++||.|++|||+++. +++++.++++..+.++.++|+ +.|+++
T Consensus 36 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~~~ 99 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLE-IEFDVA 99 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEE-EEECSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEE-EEecCC
Confidence 378999999999999999 9999999999999999 689999999987668999999 688884
No 200
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.39 E-value=3.3e-07 Score=81.69 Aligned_cols=58 Identities=14% Similarity=0.084 Sum_probs=50.5
Q ss_pred ceEEEEEcCCCHHhHc-CCCCCCEEEEECCeeCCCH-HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRY-GLYALQWIVEINGKRTPDL-EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~a-GL~~GD~I~~VNG~pV~dl-~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++ ||++||.|++|||+++.++ +++.+.++. .++.++|+ +.|+++
T Consensus 36 ~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~--~~~~v~l~-v~R~~~ 95 (100)
T 2edp_A 36 PLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIKG--SFRILKLI-VRRRNS 95 (100)
T ss_dssp EEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHHT--CCSSCEEE-EEECCC
T ss_pred CeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHHh--CCCeEEEE-EEeCCC
Confidence 7899999999999999 9999999999999999985 667777776 36788888 677765
No 201
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=1.5e-07 Score=87.62 Aligned_cols=59 Identities=15% Similarity=0.308 Sum_probs=53.5
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.+++|..|.++|||+++||++||+|++|||+++. +++++.+.++. .++.++|+ +.|+++
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~-v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQN--SDTTLELS-VMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHT--CTTEEEEE-CCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEE-EEECCC
Confidence 4799999999999999999999999999999998 99999999997 38999999 567664
No 202
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.38 E-value=7e-07 Score=83.91 Aligned_cols=54 Identities=24% Similarity=0.377 Sum_probs=49.1
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTV 730 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V 730 (775)
|++|..|.+||||+++||++||+|++|||+++. +++++.+.++. .++.++|+++
T Consensus 66 gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 121 (132)
T 3l4f_D 66 LQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVV 121 (132)
T ss_dssp SEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH--TTTEEEEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEE
Confidence 899999999999999999999999999999998 47888898887 4788999853
No 203
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.37 E-value=8e-07 Score=80.05 Aligned_cols=58 Identities=21% Similarity=0.262 Sum_probs=50.5
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.|++|..|.++|||+++| |++||.|++|||+++.+ +.++...++. .++.++|+ +.|++
T Consensus 40 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~~ 100 (107)
T 1wf8_A 40 LGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN--TKGNVRFV-IGREK 100 (107)
T ss_dssp EEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH--CCSEEEEE-EEEEC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEE-EEeCC
Confidence 489999999999999999 99999999999999974 6778888887 37899998 55544
No 204
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.37 E-value=9.5e-07 Score=76.34 Aligned_cols=58 Identities=19% Similarity=0.267 Sum_probs=50.3
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |++||+|++|||+++.+ +.++..++... .+.+.++|.|+++
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~------~~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQS------PSPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTC------CSSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEEecCC
Confidence 46779999999999996 99999999999999999 78888888532 2679999999875
No 205
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.37 E-value=9.4e-07 Score=77.67 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=48.5
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLN 733 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rd 733 (775)
.|++|..|.++|||++ ||++||.|++|||+++.+ +.++...++. .++.++|+ +.|+
T Consensus 35 ~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~ 92 (95)
T 1mfg_A 35 DGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELI-IVRE 92 (95)
T ss_dssp CCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH--CCSEEEEE-EEEE
T ss_pred CCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc--CCCeEEEE-EEeC
Confidence 4899999999999999 999999999999999987 5677777775 48899998 4554
No 206
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.37 E-value=7.9e-07 Score=81.84 Aligned_cols=60 Identities=25% Similarity=0.352 Sum_probs=51.8
Q ss_pred CCceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 673 GHGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 673 ~~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
..+++|..|.++|||+++| |++||.|++|||+++.++ .++...++. .++.++|+ +.|++.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~ 108 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN--AGYAVSLR-VQHRLQ 108 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH--HCSEEEEE-EEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEeCCc
Confidence 3489999999999999999 999999999999999985 588888887 37889998 566554
No 207
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.36 E-value=1.1e-06 Score=75.75 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=46.6
Q ss_pred ceEEEEEcCCCHHhH-cCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHR-YGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~-aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
+++|..|.+||||++ +||++||.|++|||+++. +++++...++. .++.++|++
T Consensus 29 ~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v 84 (87)
T 4e34_A 29 PILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEV 84 (87)
T ss_dssp EEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEE
T ss_pred CEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEE
Confidence 789999999999999 799999999999999995 55888998886 466788873
No 208
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.36 E-value=2.9e-07 Score=83.92 Aligned_cols=55 Identities=22% Similarity=0.212 Sum_probs=49.8
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTV 730 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V 730 (775)
+++|..|.++|||+++||++||+|++|||+++. +++++.+.++.. .++.+.|+++
T Consensus 37 ~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~-~~~~v~l~V~ 93 (111)
T 1vae_A 37 PVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSF-GGEEVEMKVV 93 (111)
T ss_dssp SCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHT-TTSEECEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEEEE
Confidence 678999999999999999999999999999999 999999999984 4677888853
No 209
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=8.8e-07 Score=79.00 Aligned_cols=80 Identities=13% Similarity=0.036 Sum_probs=55.6
Q ss_pred EEEEEEEEcChhhhhhcCCChhHHhhhhhcCCCccceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHH
Q 004068 531 ILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENA 606 (775)
Q Consensus 531 ~Lgve~~~i~~~~ar~lGls~~wi~~v~~~~~~~~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~ 606 (775)
+||+.+.......++.++++. ..+++|..|.++|||++ + |++||+|++|||++|.+ +.++..+
T Consensus 17 ~lG~~~~~~~~~~~~~~~~~~-------------~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 17 SLGISIVGGRGMGSRLSNGEV-------------MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp CCCEEEECCCC--------------------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ceeEEEEccCCCCcccccCCC-------------CCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 678877664433333333221 24677999999999998 6 99999999999999998 8888888
Q ss_pred HHhcCCCCCCCCeEEEEEEecCe
Q 004068 607 CQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 607 l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
+... ++.+.++|.|.++
T Consensus 84 l~~~------~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 84 IRKA------GNPVVFMVQSIIS 100 (103)
T ss_dssp HHTC------CSSEEEEEECCCC
T ss_pred HHhC------CCcEEEEEEECCC
Confidence 8532 3479999998754
No 210
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.36 E-value=8.3e-07 Score=80.18 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=50.0
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEe
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHL 732 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~R 732 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ ++++.+.++..+ ++.++|+ +.|
T Consensus 44 ~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~~v~l~-v~R 103 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVP-PGLVHLG-ICS 103 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSC-SEEEEEE-EEC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCeEEEE-EEc
Confidence 489999999999999999 99999999999999965 889999999843 5678888 444
No 211
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=3.4e-07 Score=81.67 Aligned_cols=58 Identities=29% Similarity=0.417 Sum_probs=50.8
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++| |++||.|++|||+++.+ +.++.+.++. .++.++|. +.|++.
T Consensus 37 ~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~~ 97 (103)
T 1wfv_A 37 DLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKS--GGRRVRLL-LKRGTG 97 (103)
T ss_dssp EEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHH--HCSEECEE-EECTTC
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEECCC
Confidence 88999999999999999 99999999999999987 4777777774 47889998 577765
No 212
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.36 E-value=1e-06 Score=77.85 Aligned_cols=51 Identities=18% Similarity=0.179 Sum_probs=45.2
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVR 728 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~ 728 (775)
.|++|..|.++|||+++||++||.|++|||+++. +++++.+++++ ..++|+
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~----~~l~lt 87 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ----PSLGLL 87 (94)
T ss_dssp CEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS----SEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC----CeEEEE
Confidence 3899999999999999999999999999999998 46899888874 456666
No 213
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.36 E-value=7.5e-07 Score=88.96 Aligned_cols=57 Identities=25% Similarity=0.399 Sum_probs=53.2
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.+||||+++||++||.|++|||+++.+ ++++.+.++. ++.+.|+ +.|+|+
T Consensus 111 ~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~---~~~v~l~-v~r~g~ 169 (192)
T 3k1r_A 111 GLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT---EKTVSIK-VRHIGL 169 (192)
T ss_dssp EEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS---SSEEEEE-EEECCE
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC---CCeEEEE-EEECCc
Confidence 8899999999999999999999999999999999 8999988876 7899999 788887
No 214
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.35 E-value=5.9e-07 Score=79.39 Aligned_cols=55 Identities=20% Similarity=0.143 Sum_probs=45.4
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEe
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHL 732 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~R 732 (775)
|++|..|.+||||+++| |++||.|++|||+++.++ ++....++. .++.++|+ +.|
T Consensus 32 gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R 89 (96)
T 2qkv_A 32 GCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG--ANGKVSME-VTR 89 (96)
T ss_dssp SEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEE-EEC
T ss_pred cEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCCcEEEE-EEe
Confidence 89999999999999999 999999999999999863 444455554 46679888 455
No 215
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.35 E-value=7.6e-07 Score=78.83 Aligned_cols=58 Identities=24% Similarity=0.243 Sum_probs=51.6
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
|++|..|.++ |+++||++||.|++|||+++.++ +++.+.++..+.++.++|+ +.|++.
T Consensus 33 Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~-v~R~g~ 92 (96)
T 1ujv_A 33 GQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLI-IHRGSG 92 (96)
T ss_dssp EEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEE-EECCSS
T ss_pred CEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEE-EEECCC
Confidence 8899999983 78999999999999999999875 9999999996668999999 688775
No 216
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.35 E-value=1.2e-06 Score=76.13 Aligned_cols=53 Identities=17% Similarity=0.297 Sum_probs=46.5
Q ss_pred ceEEEEEcCCCHHhHc-CCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHRY-GLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~a-GL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~ 729 (775)
+++|..|.++|||+++ ||++||.|++|||+++.+ +.++...++. .++.++|.+
T Consensus 31 g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~~~v~l~v 86 (90)
T 1qav_A 31 PILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK--TGKEVVLEV 86 (90)
T ss_dssp EEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEE
T ss_pred CEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEE
Confidence 8899999999999999 999999999999999985 5777777776 367788883
No 217
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.35 E-value=7.3e-07 Score=80.18 Aligned_cols=58 Identities=24% Similarity=0.214 Sum_probs=48.8
Q ss_pred ceEEEEEcCCCHHhHcC--CCCCCEEEEECCeeCCCH--HHHHHHHHhcCC--CCEEEEEEEEeC
Q 004068 675 GVYVARWCHGSPVHRYG--LYALQWIVEINGKRTPDL--EAFVNVTKEIEH--GEFVRVRTVHLN 733 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG--L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~--g~~V~L~~V~Rd 733 (775)
+++|..|.++|||+++| |++||.|++|||+++.++ +++...++...+ ++.+.|+ +.|+
T Consensus 44 ~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~-v~r~ 107 (107)
T 3nfk_A 44 PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLL-VRPN 107 (107)
T ss_dssp EEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEE-EECC
T ss_pred CeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEE-EEcC
Confidence 78999999999999999 999999999999999865 678888877432 3588888 5553
No 218
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.34 E-value=1.3e-06 Score=86.42 Aligned_cols=60 Identities=18% Similarity=0.225 Sum_probs=49.1
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.|++|..|.++|||+++| |++||.|++|||+++.++.++.........++.++|. +.|++
T Consensus 35 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~-v~r~~ 95 (196)
T 3gsl_A 35 PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLY-VMRRK 95 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEE-EEEEC
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEE-EEecC
Confidence 489999999999999999 9999999999999999885444333222458899999 56766
No 219
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.34 E-value=8.4e-07 Score=78.26 Aligned_cols=61 Identities=11% Similarity=0.141 Sum_probs=53.2
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeEE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGREI 631 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~ 631 (775)
..+++|..|.++|||++ + |++||+|++|||+++.+ +.++..++.. . ++.+.++|.|+++.+
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~-----g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-C-----GQEAALLIEYDVSET 95 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-S-----CSEEEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C-----CCeEEEEEEeCCCcC
Confidence 35677999999999998 6 99999999999999999 8898888864 2 688999999988653
No 220
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.34 E-value=9.5e-07 Score=81.84 Aligned_cols=60 Identities=15% Similarity=0.112 Sum_probs=51.4
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.+++|..|.++|||+++| |++||.|++|||+++.+ +.++...++.. +..++|+ +.|++..
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~--~~~v~l~-v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA--PSKVKLV-FIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS--CSEEEEE-EEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEE-EEeCCCc
Confidence 389999999999999999 99999999999999966 77777788773 5689998 5777654
No 221
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.34 E-value=1.3e-06 Score=79.91 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=47.8
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
+++|..|.+||||+++| |++||.|++|||+++ .+++++.+.++.. +..++|.+
T Consensus 51 ~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~--~~~v~l~v 106 (114)
T 2gzv_A 51 CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV--KGEVTIHY 106 (114)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--CSEEEEEE
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEE
Confidence 78999999999999999 999999999999999 9999999999873 34577773
No 222
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=1.5e-06 Score=78.30 Aligned_cols=58 Identities=24% Similarity=0.378 Sum_probs=49.5
Q ss_pred CceEEEEEcCCCHHhHc-CCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRY-GLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~a-GL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.+++|..|.++|||+++ ||++||.|++|||+++.+ +.++...++. .++.+.|+ +.|.+
T Consensus 41 ~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~R~~ 101 (107)
T 1uhp_A 41 EGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT--AKEPIVVQ-VLRRT 101 (107)
T ss_dssp CCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEE-EEECC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEE-EEeCC
Confidence 48999999999999999 999999999999999976 6777788886 46789888 45543
No 223
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.34 E-value=4.4e-07 Score=79.97 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=51.6
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeEE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGREI 631 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~ 631 (775)
.+++|..|.++|||+++ |++||+|++|||+++.+ +.++..++.. .++.+.++|.|+++..
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~r~~~~~ 92 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQG------QGSCVSLTVVDPEADR 92 (96)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHT------TTTEEEEEEECCCTTS
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCEEEEEEECCCCcc
Confidence 56779999999999996 99999999999999999 7888877743 2688999999988653
No 224
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.32 E-value=8.2e-07 Score=81.48 Aligned_cols=59 Identities=17% Similarity=0.226 Sum_probs=47.1
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
|++|..|.++|||+++| |++||.|++|||+++.++.++.........++.+.|. +.|++
T Consensus 39 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~-v~r~~ 98 (119)
T 1tp5_A 39 GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII-AQYKP 98 (119)
T ss_dssp CEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEE-EEECH
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE-EEECC
Confidence 89999999999999999 9999999999999999885433322222357889998 45544
No 225
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.31 E-value=1.7e-06 Score=76.37 Aligned_cols=59 Identities=20% Similarity=0.262 Sum_probs=49.0
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
..+++|..|.++|||++ + |++||+|++|||+++.++ .++..++.. .++.+.++|.|+|+
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE------ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH------SCSEEEEEEEEC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc------CCCeEEEEEEeCCC
Confidence 35677999999999998 5 999999999999999997 667776643 26889999999874
No 226
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.30 E-value=1.7e-06 Score=74.61 Aligned_cols=51 Identities=22% Similarity=0.304 Sum_probs=45.4
Q ss_pred EEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEE
Q 004068 677 YVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRT 729 (775)
Q Consensus 677 ~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~ 729 (775)
+|.++.+||||+++||++||.|++|||+++. +.++.++.+++ .++.|+|++
T Consensus 26 ~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~--~g~~V~L~v 78 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILST--SGTVVTITI 78 (82)
T ss_dssp EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEE
T ss_pred EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCEEEEEE
Confidence 4789999999999999999999999999995 45788888885 588899985
No 227
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.30 E-value=9.6e-07 Score=78.50 Aligned_cols=60 Identities=23% Similarity=0.301 Sum_probs=48.4
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |++||+|++|||++|.++. +..++..+. .++.+.|+|.|+|+.
T Consensus 36 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~~~----~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-MGSAVKVLT----SSSRLHMMVRRMGSG 96 (100)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-HHHHHHHHH----SCSSEEEEEEECSCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHhhc----CCCEEEEEEEECCcC
Confidence 45679999999999996 9999999999999999974 444443333 267899999999864
No 228
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.30 E-value=2.5e-06 Score=84.78 Aligned_cols=67 Identities=19% Similarity=0.284 Sum_probs=56.5
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEe---CCeEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHL---NGKPRVLTLKQD 744 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~R---dg~~~~ltlk~d 744 (775)
.|++|..|.+||||++ ||++||.|++|||+++.+. .+....++. .+..+.|. +.| +|+...++++..
T Consensus 24 ~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~r~~~~G~~~~~~v~~~ 95 (195)
T 2qbw_A 24 DGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELI-IVREVGNGAKQEIRVRVE 95 (195)
T ss_dssp CSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEE-EEEECSSSCEEEEEEEEE
T ss_pred CCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEEcCCCCCCceeEeEee
Confidence 4999999999999999 9999999999999999874 566667776 35689999 677 888877776654
No 229
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.30 E-value=2.9e-06 Score=93.87 Aligned_cols=78 Identities=22% Similarity=0.254 Sum_probs=67.1
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe---EEEEEEEeCCCCC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK---PRVLTLKQDLHYW 748 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~---~~~ltlk~d~~y~ 748 (775)
.+++|..|.+||||+++||++||+|++|||+++.++ +++.+.++. +.|+.++|+ +.|+|. ++.++|+.+.---
T Consensus 99 ~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~-~~g~~v~l~-v~r~g~~~~~~~~~l~r~~i~~ 176 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQG-EADSQVEVV-LHAPGAPSNTRTLQLTRQKVTI 176 (388)
T ss_dssp SCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCB-STTCEEEEE-EEETTEEEEEEEEEEECBCCCC
T ss_pred CcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCCEEEEE-EEeCCCCcceEEEEEEEceeec
Confidence 388999999999999999999999999999999996 788888876 679999999 688998 7888988876555
Q ss_pred CceeE
Q 004068 749 PTWEL 753 (775)
Q Consensus 749 pt~e~ 753 (775)
++...
T Consensus 177 ~~v~~ 181 (388)
T 1fc6_A 177 NPVTF 181 (388)
T ss_dssp CCEEE
T ss_pred Cceee
Confidence 55543
No 230
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.29 E-value=2.5e-06 Score=85.25 Aligned_cols=57 Identities=21% Similarity=0.250 Sum_probs=51.8
Q ss_pred ceEEEEEcCCCHHhHc-CCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRY-GLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~a-GL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
+++|..|.+||||+++ ||++||+|++|||+++.++ .++...++. .++.++|. +.|++
T Consensus 34 ~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~ 93 (200)
T 2qt5_A 34 KPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKN--VGERVVLE-VEYEL 93 (200)
T ss_dssp CSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHT--CCSEEEEE-EEEEC
T ss_pred CeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEE-EeccC
Confidence 7899999999999999 9999999999999999999 899988876 47899999 57766
No 231
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.29 E-value=3.6e-07 Score=84.13 Aligned_cols=57 Identities=23% Similarity=0.285 Sum_probs=50.2
Q ss_pred ceEEEEEcCCCHHhHc-CCCCCCEEEEECCeeCCC--HHHHHHHHHhcC--CCCEEEEEEEEe
Q 004068 675 GVYVARWCHGSPVHRY-GLYALQWIVEINGKRTPD--LEAFVNVTKEIE--HGEFVRVRTVHL 732 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~a-GL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~--~g~~V~L~~V~R 732 (775)
.++|..|.+||||+++ ||++||.|++|||+++.+ ++++.+.++... .|+.++|++ .|
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v-~r 105 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVV-AV 105 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEE-EC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEE-Ee
Confidence 4899999999999999 999999999999999997 789999988752 388999994 54
No 232
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.28 E-value=2e-06 Score=74.34 Aligned_cols=58 Identities=22% Similarity=0.362 Sum_probs=48.2
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++ .++...+. . .++.+.++|.|++.
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIK--G----CTGSLNMTLQRESD 87 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH--T----CCSEEEEEEECCCC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH--h----CCCeEEEEEEeCCC
Confidence 45679999999999996 999999999999999999 56655553 1 26789999999874
No 233
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=3.6e-07 Score=82.90 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=51.3
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.|++|..|.++|||+++| |++||.|++|||+++. +++++...++. .++.++|+ +.|+.
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~--~g~~v~l~-v~r~~ 104 (111)
T 1uju_A 44 EGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS--VGDTLTVL-VCDGF 104 (111)
T ss_dssp CCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS--CSSEEEEC-CCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEECC
Confidence 489999999999999999 9999999999999999 68888888876 47889888 55544
No 234
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.28 E-value=7.3e-07 Score=78.87 Aligned_cols=59 Identities=17% Similarity=0.112 Sum_probs=50.5
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |++||+|++|||+++.+ +.++..++.... ++.+.++|.|+|+
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-----~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG-----DETKLLVVDRETD 94 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-----TEEEEEECCHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-----CcEEEEEEECCch
Confidence 46779999999999996 99999999999999999 899988885432 5667899989875
No 235
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=5.1e-07 Score=84.08 Aligned_cols=68 Identities=25% Similarity=0.328 Sum_probs=55.6
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecc
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDV 639 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~ 639 (775)
+++|..|.++|||+++ |++||+|++|||++|.++.+ ..++..+.. ++.+.|+|.|+|+..++.+.+..
T Consensus 47 gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-~~~~~~~~~----~~~v~l~v~R~g~~~~~~v~~~~ 115 (128)
T 1uf1_A 47 GIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH-DEAVRLLKS----SRHLILTVKDVGRLPHARTTVDE 115 (128)
T ss_dssp CCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCH-HHHHHHHTT----CSEEEEEEECCSCCSSCSCCCCS
T ss_pred CEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH-HHHHHHHhc----CCeEEEEEEECCccccccccccc
Confidence 5679999999999996 99999999999999999866 445544442 57899999999988777666554
No 236
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.27 E-value=6.5e-07 Score=81.99 Aligned_cols=55 Identities=20% Similarity=0.270 Sum_probs=48.5
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEE
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTV 730 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V 730 (775)
.|++|..|.++|||+++| |++||+|++|||+++.+ ++++...++. .++.++|.+.
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~ 107 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKN--AGNPVVFIVQ 107 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHT--SCSSEEEEEC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 489999999999999999 99999999999999976 6678888876 4788999843
No 237
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.27 E-value=1.7e-06 Score=77.77 Aligned_cols=61 Identities=20% Similarity=0.206 Sum_probs=51.4
Q ss_pred ceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+.+|++||+|++|||+++.++.++........ .++.+.++|.|+++.
T Consensus 39 ~gv~V~~V~~~spA~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~----~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 39 TSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAFAVQQLRK----SGKNAKITIRRKKGG 99 (107)
T ss_dssp CCEEEEEECTTSTTBTTBCTTCEEEEETTEECTTCCHHHHHHHHHT----CCSEEEEEEEEESCC
T ss_pred CCEEEEEECCCCchhhCCCCCCEEEEECCEECCCccHHHHHHHhhC----CCCEEEEEEEECCCC
Confidence 4677999999999993399999999999999999988877665443 378899999998754
No 238
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.27 E-value=1.9e-06 Score=86.34 Aligned_cols=60 Identities=17% Similarity=0.140 Sum_probs=51.6
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC----HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD----LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d----l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
|++|..|.++|||+++| |++||+|++|||+++.+ +.++...++. ..++.++|+ +.|++..
T Consensus 46 g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~-~~~~~v~l~-v~R~~~~ 110 (206)
T 3r0h_A 46 GCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHT-TYEKAVTLT-VFRADPP 110 (206)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHS-CCSSEEEEE-EECCSSC
T ss_pred CeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHh-cCCCceEEE-EEecccC
Confidence 89999999999999998 99999999999999999 7778877776 334449998 6788754
No 239
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=8.2e-07 Score=79.71 Aligned_cols=58 Identities=26% Similarity=0.323 Sum_probs=49.2
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.|++|..|.++|||+++||++||.|++|||+++.+ ++++...++. .++.+.|.+ .|.+
T Consensus 32 ~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v-~r~~ 91 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKK--SGSRVMFLL-VDKE 91 (106)
T ss_dssp CSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHH--HCSEEEEEE-CCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEE-EcCc
Confidence 48999999999999999999999999999999985 5788888876 367888884 4443
No 240
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.25 E-value=2.6e-06 Score=76.32 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=47.4
Q ss_pred ceEEEEEcCCCHHhHc-CCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRY-GLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTV 730 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~a-GL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V 730 (775)
+++|..|.++|||+++ ||++||.|++|||+++.+ ++++.+.++.. +..++|++.
T Consensus 36 ~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~ 92 (103)
T 2dc2_A 36 PILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ--RGEIEFEVV 92 (103)
T ss_dssp EEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC--CSEEEEEEE
T ss_pred CEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEEEE
Confidence 7899999999999995 999999999999999955 88999999873 457888843
No 241
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.25 E-value=5.9e-07 Score=78.95 Aligned_cols=59 Identities=22% Similarity=0.290 Sum_probs=50.5
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++ .++..++... ++.+.++|.|+|+.
T Consensus 30 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~------~~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQS------ASPLRLQLDRSSGP 91 (94)
T ss_dssp EEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC------CSSEEEEEECCCCC
T ss_pred CCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC------CCcEEEEEEECCcC
Confidence 46779999999999996 999999999999999998 8888777432 36799999999865
No 242
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.25 E-value=4e-07 Score=81.48 Aligned_cols=66 Identities=20% Similarity=0.295 Sum_probs=52.0
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREIELQVGT 637 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l 637 (775)
..++|..|.++|||+++ |++||+|++|||+++.++ .++...+. . .++.+.++|.|+++..++.+.+
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~g~~~~~~v~p 97 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIK--A----CTGSLNMTLQRASAAAKSEPVS 97 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHH--H----CSSEEEEEECCCSCCCCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCCcCCCCCCC
Confidence 34679999999999996 999999999999999998 44443432 2 2578999999999876665543
No 243
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=4.6e-07 Score=84.01 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=55.0
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQV 635 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V 635 (775)
.+++|..|.++|||++ + |++||+|++|||++|.++.++..++... .++.+.|+|.|+|+.++...
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~-----~g~~v~l~v~R~g~~~~~~~ 114 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSE-----ENKNFSLLIARPELQLDEGW 114 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCS-----SCCSCCEEEEECSSCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhC-----CCCEEEEEEEECCEEeeccc
Confidence 5677999999999998 5 9999999999999999999999888532 26789999999997655433
No 244
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.24 E-value=2.2e-06 Score=74.57 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=49.9
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
..++|..|.++|||++ + |++||+|++|||+++. +++++..+++... + .+.++|.|.++
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-----~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMR-----G-SITFKIVPSYR 86 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCC-----E-EEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-----C-cEEEEEECCcC
Confidence 3466999999999998 7 9999999999999999 8999998886543 3 79999998764
No 245
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.24 E-value=2.8e-06 Score=75.17 Aligned_cols=58 Identities=21% Similarity=0.231 Sum_probs=50.0
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
+++|..|.++|||+++ |+.||+|++|||+++. ++.++..++. . .++.+.++|.|+++.
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~--~----~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL--K----SGNKISLRTTALENT 95 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH--H----SCSEEEEEEECSCSS
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh--c----CCCEEEEEEEECCCc
Confidence 5679999999999996 9999999999999999 7888887775 2 378899999997753
No 246
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.23 E-value=1.7e-06 Score=80.41 Aligned_cols=61 Identities=23% Similarity=0.233 Sum_probs=52.2
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |++||+|++|||++|.++ .++..++.... .++.+.|+|.|++++
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLP----KGEEVTILAQKKKDV 114 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSC----TTCEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcC----CCCEEEEEEEECCch
Confidence 46779999999999986 999999999999999999 88888775544 378899999998754
No 247
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.23 E-value=8.6e-07 Score=82.95 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=51.3
Q ss_pred CceEEEEEcCCCHHhHc-CCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRY-GLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~a-GL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.+++|..|.+||||+++ ||++||+|++|||+++.+ ++++++.++.. .++.+.|. +.|++
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~~v~l~-v~r~~ 118 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL-PDGPVTIV-IRRKS 118 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS-CSSEEEEE-EEEES
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEE-EEeCC
Confidence 37899999999999999 999999999999999987 68999999984 46788888 55544
No 248
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.23 E-value=2.8e-06 Score=83.37 Aligned_cols=57 Identities=21% Similarity=0.317 Sum_probs=50.8
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVRTVHLN 733 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~~V~Rd 733 (775)
.|++|..|.+||||+++| |++||+|++|||+++ .+++++++.++. .++.|+|+ |.|+
T Consensus 111 ~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~g~~v~L~-V~R~ 170 (170)
T 3egg_C 111 LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFM-IGRE 170 (170)
T ss_dssp BEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH--CCSEEEEE-EEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEE-EEeC
Confidence 489999999999999999 999999999999999 667899999988 47889998 5664
No 249
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.23 E-value=2.6e-06 Score=78.95 Aligned_cols=58 Identities=14% Similarity=0.122 Sum_probs=49.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||++|.+ +.++..++... ++.+.++|.|...
T Consensus 59 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~------~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 59 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA------GNPVVFMVQSIIS 120 (123)
T ss_dssp CSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC------CSSEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEEECCc
Confidence 5677999999999998 6 99999999999999998 88888888543 3579999988653
No 250
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.23 E-value=1.7e-06 Score=75.90 Aligned_cols=58 Identities=16% Similarity=0.318 Sum_probs=48.1
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
+++|..|.++|||+++ |+.||+|++|||+++.++.++ .++..+. .++.+.|+|.|++.
T Consensus 30 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~~~----~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 30 IVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-EVVKLIK----SGAYVALTLLGSSS 88 (93)
T ss_dssp SCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-HHHHHHT----SSSEEEEEEECCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-HHHHhhc----CCCEEEEEEEECCC
Confidence 4569999999999996 999999999999999998766 3444444 37899999999764
No 251
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.22 E-value=2.5e-06 Score=76.12 Aligned_cols=58 Identities=19% Similarity=0.241 Sum_probs=47.4
Q ss_pred cceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 565 RQVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
..+++|..|.++|||+++ |++||+|++|||+++.+ +.++..++.. . .++.+.++|.|+
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~----~g~~v~l~v~R~ 104 (104)
T 3sfj_A 44 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTK-R----SEEVVRLLVTRQ 104 (104)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTC-T----TCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-C----CCCEEEEEEEcC
Confidence 356779999999999986 99999999999999976 4477777632 1 367899999884
No 252
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.22 E-value=1.7e-06 Score=74.29 Aligned_cols=57 Identities=26% Similarity=0.381 Sum_probs=45.8
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
+++|..|.++|||+++ |++||+|++|||+++.++ .++...+ .. .++.+.++|.|+++
T Consensus 26 ~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~---~~---~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 26 PLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKI---KS---ASYNLSLTLQKSKR 85 (85)
T ss_dssp CCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHH---TT---CSSCEEEEEESCCC
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHH---Hc---CCCeEEEEEEeCCC
Confidence 4569999999999986 999999999999999998 4444444 21 24669999999874
No 253
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.22 E-value=9.8e-07 Score=76.98 Aligned_cols=59 Identities=15% Similarity=0.241 Sum_probs=46.8
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |++||+|++|||+++. ++.++..++.. .++.+.|+|.|+++.
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~r~~~~ 88 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQS------SGKNVTLLVCGKKAQ 88 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTT------SCSEEEEEEEC----
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCEEEEEEEeCCcc
Confidence 35569999999999996 9999999999999999 88888888732 267899999998765
No 254
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.22 E-value=2.8e-06 Score=76.15 Aligned_cols=66 Identities=15% Similarity=0.153 Sum_probs=47.2
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhh--HHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHD--IENACQALDKDGEDNGKLDITIFRQGREIELQVGT 637 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~d--l~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l 637 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.+... +...+ .. .++.+.|+|.|+++...+.++.
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~--~~----~~~~v~l~v~R~~~~~~~~~~p 102 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTAL--KN----TSDFVYLKVAKPTSMYISRHHH 102 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHH--HS----CCSEEEEEEECCCC--------
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH--Hc----CCCeEEEEEEcCCCCCCccccc
Confidence 4677999999999998 6 99999999999999987543 33333 22 2678999999999887766554
No 255
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.22 E-value=1.5e-07 Score=95.89 Aligned_cols=72 Identities=19% Similarity=0.163 Sum_probs=61.9
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCC--CHHHHHHHHHhcCCCCEE-EEEEEEeCCeEE--EEEEEeCCCCCC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTP--DLEAFVNVTKEIEHGEFV-RVRTVHLNGKPR--VLTLKQDLHYWP 749 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~--dl~~f~~~v~~i~~g~~V-~L~~V~Rdg~~~--~ltlk~d~~y~p 749 (775)
|++|..|.+||||+++||++||+|++|||++|. +++++.+.++.. |+.+ .|. +.|+|..+ .+++++.....+
T Consensus 34 gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~--g~~v~~l~-V~R~g~~~~~~v~v~p~~~~~~ 110 (216)
T 2krg_A 34 GQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG--GDETKLLV-VDRETDEFFKKCRVIPSQEHLN 110 (216)
T ss_dssp SCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH--CSEEEEEE-CCHHHHHHHHHHTCCCCGGGGS
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc--CCeEEEEE-EEECCEEEEEEEEEEEeeeecC
Confidence 889999999999999999999999999999999 999999999984 7888 666 78899876 666666654433
No 256
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.22 E-value=1.4e-06 Score=77.75 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=48.9
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeC
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLN 733 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rd 733 (775)
.|++|..|.++|||++ ||++||.|++|||+++.+ +.++...++. .++.++|+ +.|+
T Consensus 43 ~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~ 100 (103)
T 1n7t_A 43 DGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELI-IVRE 100 (103)
T ss_dssp CSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHH--CCSEEEEE-EECC
T ss_pred CCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhc--CCCeEEEE-EEec
Confidence 4899999999999999 999999999999999977 6777777775 47889998 5664
No 257
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.22 E-value=2.2e-06 Score=96.75 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=66.0
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe----------EEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK----------PRVLTLK 742 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~----------~~~ltlk 742 (775)
|++|..|.+||||+++||++||.|++|||+++.+ ++++...++..+.|+.++|+ +.|+++ ...+.++
T Consensus 24 Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~-V~r~g~~~~~~~~~~~g~s~yVr 102 (468)
T 3shw_A 24 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL-AQKKKDVYRRIVESDVGDSFYIR 102 (468)
T ss_dssp EEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEE-EEECHHHHHHHHHHTCCCCEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE-EEECCccchhhhccccccccccc
Confidence 8999999999999999999999999999999988 89999999997789999999 677653 1234577
Q ss_pred eCCCCCCce
Q 004068 743 QDLHYWPTW 751 (775)
Q Consensus 743 ~d~~y~pt~ 751 (775)
..++|-|.-
T Consensus 103 alfdy~~~~ 111 (468)
T 3shw_A 103 THFEYEKES 111 (468)
T ss_dssp ECSCBCCSS
T ss_pred cccCcCCCC
Confidence 788888754
No 258
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.21 E-value=2.3e-06 Score=94.84 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=65.2
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe----------EEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK----------PRVLTLK 742 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~----------~~~ltlk 742 (775)
|++|..|.+||||+++||++||.|++|||+++.+ ++++...++..+.|+.++|+ +.|+++ ...+-++
T Consensus 32 gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~-v~r~~~~~~~~~~~~~~~~~~vr 110 (391)
T 3tsz_A 32 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL-AQKKKDVYRRIVESDVGDSFYIR 110 (391)
T ss_dssp EEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEE-EEECHHHHGGGTSSCCSCCEEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEE-EeeCCcccccccccccccccccc
Confidence 8999999999999999999999999999999976 89999999986679999999 677652 1345677
Q ss_pred eCCCCCCce
Q 004068 743 QDLHYWPTW 751 (775)
Q Consensus 743 ~d~~y~pt~ 751 (775)
..++|-|..
T Consensus 111 al~dy~~~~ 119 (391)
T 3tsz_A 111 THFEYEKES 119 (391)
T ss_dssp ECSCBCCSS
T ss_pred cccccCCCC
Confidence 788887754
No 259
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.21 E-value=2.8e-06 Score=73.71 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=47.6
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++ .++...+. . .++.+.++|.|+++.
T Consensus 27 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~~~~ 88 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIR--A----CGERLSLGLSRAITS 88 (89)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHH--T----CTTEEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH--h----CCCEEEEEEEeCCCC
Confidence 45679999999999996 999999999999999965 55555542 2 257899999998753
No 260
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=5.7e-07 Score=82.63 Aligned_cols=60 Identities=23% Similarity=0.213 Sum_probs=50.6
Q ss_pred ceEEEEEcCCCHHhHc--CCCCCCEEEEECCeeCCC--HHHHHHHHHhcCC--CCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHRY--GLYALQWIVEINGKRTPD--LEAFVNVTKEIEH--GEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~a--GL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~--g~~V~L~~V~Rdg~ 735 (775)
+++|..|.++|||+++ ||++||.|++|||+++.+ +.++.+.++.... +..++|. +.|++.
T Consensus 42 ~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~-v~R~~~ 107 (119)
T 2cs5_A 42 PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLL-VRPNAV 107 (119)
T ss_dssp EEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEE-EECCCC
T ss_pred CeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEE-EEcccc
Confidence 7899999999999999 999999999999999976 5788888887432 2578888 677654
No 261
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.20 E-value=1.4e-06 Score=77.54 Aligned_cols=60 Identities=30% Similarity=0.392 Sum_probs=49.4
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |++||+|++|||++|.++.+.. ++..+.. ++.+.++|.|+|+.
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~-~~~~~~~----~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAE-AVKALKG----SKKLVLSVYSAGRI 95 (101)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHH-HHHHSSS----SSSCCEEECCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH-HHHhhcC----CCeEEEEEEECCcc
Confidence 45679999999999996 9999999999999999998844 4444442 56789999998763
No 262
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=9.7e-07 Score=78.04 Aligned_cols=56 Identities=20% Similarity=0.246 Sum_probs=48.8
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
+++|..|.++|||+ +||++||.|++|||+++.+ +.++...++. .++.++|. +.|++
T Consensus 32 ~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~--~g~~v~l~-v~R~~ 89 (96)
T 2edv_A 32 PLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE--AEDSLSIT-VVRCT 89 (96)
T ss_dssp SCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH--CSSCEEEE-EEECC
T ss_pred CeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE-EEECC
Confidence 78999999999996 9999999999999999976 6777777776 48889999 56765
No 263
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=1.4e-06 Score=79.79 Aligned_cols=53 Identities=19% Similarity=0.170 Sum_probs=46.1
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEe
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHL 732 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~R 732 (775)
+++|..|.++|||+++||++||.|++|||+++.+ ++++.+.++. ..+.|+ +.|
T Consensus 45 gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~----~~v~l~-v~R 99 (114)
T 2d8i_A 45 RLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ----PSLGLL-VRT 99 (114)
T ss_dssp EEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS----SEEEEE-EEE
T ss_pred CEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC----CcEEEE-EEE
Confidence 8899999999999999999999999999999998 5688777764 378887 454
No 264
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.19 E-value=1.7e-06 Score=77.71 Aligned_cols=59 Identities=17% Similarity=0.195 Sum_probs=50.6
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCC--HHHHHHHHHhc---CCCCEEEEEEEEeCC
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPD--LEAFVNVTKEI---EHGEFVRVRTVHLNG 734 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~d--l~~f~~~v~~i---~~g~~V~L~~V~Rdg 734 (775)
.++|..|.++|||+++| |++||.|++|||+++.+ ++++++.++.. ..++.+++. +.|.+
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~-v~r~~ 97 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFL-VTEFN 97 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEE-ECCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEE-EEEcc
Confidence 45999999999999999 99999999999999976 89999999884 247788888 45544
No 265
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.19 E-value=3.8e-06 Score=73.06 Aligned_cols=58 Identities=21% Similarity=0.165 Sum_probs=46.2
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++.+......... .++.+.++|.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~----~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAE----SGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT----STTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc----CCCEEEEEEEeC
Confidence 46779999999999985 99999999999999999865443322222 267899999885
No 266
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.18 E-value=3.6e-06 Score=73.14 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=49.3
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++ .++..++.. .++.+.++|.|.+.
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~------~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKA------REDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTT------SSSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCcEEEEEEccCC
Confidence 46779999999999996 999999999999999999 777777732 25789999999764
No 267
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.18 E-value=2.7e-06 Score=73.62 Aligned_cols=59 Identities=22% Similarity=0.339 Sum_probs=45.6
Q ss_pred ceEEEEEEcCCChHhhhccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..+ ++|||+.+|++||+|++|||+++.++ .++..++.... .++++.++|.|+|+
T Consensus 27 ~~~~v~~v-~~spA~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRSRGLKEGDLIVEVNKKNVQALTHNQVVDMLVESP----KGSEVTLLVQRQTR 87 (88)
T ss_dssp SSEEEEEC-CC--CCTTCCTTCEEEEETTEECTTSCHHHHHHHHHTSC----TTCEEEEEEEEECC
T ss_pred CcEEEEEe-cCChhHhCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCC----CCCEEEEEEEeCCc
Confidence 45667777 89999934999999999999999998 77777765332 26789999999875
No 268
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.17 E-value=8.2e-07 Score=81.36 Aligned_cols=58 Identities=19% Similarity=0.242 Sum_probs=49.8
Q ss_pred CceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 674 HGVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
.|++|..|.++|||+ +||++||.|++|||+++.++ .++...++. .++.++|. +.|.+.
T Consensus 46 ~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~-v~R~~~ 105 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK--SGKIAAIV-VKRPRK 105 (117)
T ss_dssp CBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH--SCSEEEEE-EEEEEE
T ss_pred CCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc--CCCeEEEE-EEECCc
Confidence 489999999999997 99999999999999999874 777788887 48899998 566544
No 269
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.17 E-value=5e-06 Score=74.85 Aligned_cols=66 Identities=17% Similarity=0.274 Sum_probs=50.3
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE-EEEEEEe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE-IELQVGT 637 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~-~~l~V~l 637 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.+ +.++..+++ . .++++.++|.|+++. ..+++.+
T Consensus 32 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~--~----~~~~v~l~v~R~~~~~~~~~v~l 102 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALK--N----TSDFVYLKVAKPGSGEKIMEIKL 102 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH--S----CCSEEEEEEECCSSSCSEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHh--C----CCCeEEEEEEeCCCCCeEEEEEE
Confidence 4677999999999998 6 99999999999999976 455555552 2 257899999998753 3334444
No 270
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=2.1e-06 Score=75.36 Aligned_cols=58 Identities=24% Similarity=0.309 Sum_probs=46.3
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
..++|..|.++|||+++ |++||+|++|||+++.++. ++...+. . .++.+.++|.|+++
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIK--G----CHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHH--T----CCSCEEEEEECCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCC
Confidence 44569999999999986 9999999999999999973 3333332 2 26779999999875
No 271
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.16 E-value=5.4e-06 Score=76.49 Aligned_cols=60 Identities=20% Similarity=0.308 Sum_probs=50.3
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||++|.+ +.++..++.... .++.+.++|.|+|+
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTK----MEGTVSLLVFRQED 121 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCC----SSCEEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC----CCCEEEEEEEeCCC
Confidence 4577999999999998 6 99999999999999998 477777775443 26789999999874
No 272
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.15 E-value=5.4e-06 Score=74.95 Aligned_cols=61 Identities=20% Similarity=0.306 Sum_probs=50.9
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |++||+|++|||+++.++ .++..++.... .++.+.++|.|+++.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK----MEGTVSLLVFRQEEA 103 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC----CSSEEEEEEEECCCC
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC----CCCeEEEEEEeCCCC
Confidence 5677999999999998 6 999999999999999764 77877775443 267899999998864
No 273
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.15 E-value=2.2e-06 Score=79.94 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=49.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |+.||+|++|||++| .++.++..++.. .++.+.|+|.|+++
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~------~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA------NSRNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHH------TTTSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEECCc
Confidence 5677999999999998 6 899999999999999 778888877753 24669999999875
No 274
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.14 E-value=6.5e-06 Score=75.56 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=50.3
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
..+++|..|.++|||++ + |++||+|++|||++|. ++.++..++... ++++.|+|.|+|+.
T Consensus 52 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~------~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 52 DLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT------KGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC------CSSEEEEEEECSCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEEeCCcc
Confidence 35678999999999997 6 9999999999999999 777777777432 45699999998875
No 275
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.13 E-value=1.3e-06 Score=80.53 Aligned_cols=62 Identities=23% Similarity=0.295 Sum_probs=53.3
Q ss_pred cceEEEEEEcC--CChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEE
Q 004068 565 RQVLRVKGCLA--GSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREIE 632 (775)
Q Consensus 565 ~q~l~V~~V~~--gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~ 632 (775)
..+++|..|.+ +|||+++ |++||+|++|||++|.+| .++..++... ++.+.++|.|+|+..+
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~------g~~v~l~v~R~g~~~~ 109 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT------SQTLQLLIEHDPVPQR 109 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC------SSCEEEEEEECSSCCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC------CCEEEEEEEECCEEEe
Confidence 46778999999 9999996 999999999999999999 9998888422 4679999999987644
No 276
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.13 E-value=1.5e-06 Score=80.75 Aligned_cols=69 Identities=19% Similarity=0.351 Sum_probs=58.4
Q ss_pred ceEEEEEEcCCChHhhh-c-cCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecc
Q 004068 566 QVLRVKGCLAGSKAENM-L-EQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDV 639 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-L-q~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~ 639 (775)
.+++|..|.++|||+++ | +.||+|++|||+++.+ +.++..++... .++.+.++|.|+|+...+.+.+..
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~-----~g~~v~l~v~R~g~~~~~~~~~~~ 105 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI-----ASETHVVLILRGPEGFTTHLETTF 105 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSC-----CSSCEEEEEECCCCSEEECCCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-----CCCeEEEEEEeCCceEEEEEEEEe
Confidence 45679999999999985 7 9999999999999999 88988888542 267899999999998887776543
No 277
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.13 E-value=5.5e-06 Score=75.69 Aligned_cols=59 Identities=24% Similarity=0.182 Sum_probs=52.1
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
|.+|..+.+ ||+.+||++||.|++|||+++.+ .+++++.++..+.|+.++|+ |.|+|.+
T Consensus 35 g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~-V~R~g~~ 95 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLL-ILRGGPP 95 (113)
T ss_dssp EEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEE-EEESSCC
T ss_pred CcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEE-EEECCcc
Confidence 667888887 68899999999999999999995 47999999998889999999 7888864
No 278
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=1.6e-06 Score=78.55 Aligned_cols=58 Identities=22% Similarity=0.322 Sum_probs=49.6
Q ss_pred CceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCC
Q 004068 674 HGVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNG 734 (775)
Q Consensus 674 ~gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg 734 (775)
.+++|..|.++|||+++| |++||.|++|||+++.++ .++...++. .++.++|. +.|++
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~--~~~~v~l~-v~r~~ 99 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR--AGQSVTIV-AQYRP 99 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS--CCSEEEEE-EECCH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCcEEEE-EEECc
Confidence 388999999999999999 999999999999999987 677777764 47889988 55554
No 279
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.13 E-value=4.8e-06 Score=73.45 Aligned_cols=61 Identities=15% Similarity=0.208 Sum_probs=48.7
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCeEEE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGREIE 632 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~ 632 (775)
.+++|..|.++|||++ + |++||+|++|||+++.++. ++..++. . .++.+.++|.|+++...
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~~~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLR--Q----TPQRVRLTLYRDEAPYK 94 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH--T----CCSEEEEEEEECSSCCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH--h----CCCeEEEEEEcCCCCCc
Confidence 4677999999999998 6 9999999999999999854 5544442 2 24789999999886543
No 280
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.13 E-value=1.3e-06 Score=79.89 Aligned_cols=61 Identities=23% Similarity=0.217 Sum_probs=52.4
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC---ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT---CFHDIENACQALDKDGEDNGKLDITIFRQGREI 631 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~---s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~ 631 (775)
..+++|..|.++|||++ + |++||+|++|||+++. ++.++..++.. .++.+.|+|.|+++..
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~------~~~~v~l~v~R~~~~~ 113 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK------AKDTVQLVIARGSLPQ 113 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH------CCSEEEEEEESSCCGG
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc------CCCEEEEEEEeCCcce
Confidence 35778999999999998 6 9999999999999999 88888887753 2688999999988653
No 281
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.13 E-value=4.7e-06 Score=73.17 Aligned_cols=60 Identities=23% Similarity=0.216 Sum_probs=46.6
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+++.++........... .++.+.++|.|+++
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~----~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA----SGERVNLTIARPGK 90 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH----CCSEEEEEEEEESC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc----CCCEEEEEEEcCCc
Confidence 3577999999999998 6 99999999999999987544333222222 26889999999875
No 282
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.12 E-value=5.9e-06 Score=72.01 Aligned_cols=58 Identities=22% Similarity=0.416 Sum_probs=46.0
Q ss_pred EEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEE
Q 004068 568 LRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREI 631 (775)
Q Consensus 568 l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~ 631 (775)
++|..|.++|||+++ |+.||+|++|||+++.++ .++..++.. .++.+.++|.|++...
T Consensus 26 ~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~------~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 26 VRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRS------CPSEIILLVWRMVPQV 86 (91)
T ss_dssp CEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT------CSSEEEEEEEECC---
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEeCCCCC
Confidence 569999999999986 999999999999999965 666666532 2567999999987654
No 283
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.12 E-value=7.2e-06 Score=70.33 Aligned_cols=57 Identities=19% Similarity=0.337 Sum_probs=46.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFR 626 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R 626 (775)
.+++|..|.++|||++ + |++||+|++|||+++.+ +.++..++.... .++.+.++|.|
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP----IGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC----TTCEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC----CCCeEEEEEEC
Confidence 4567999999999998 6 99999999999999995 577877775443 25778888876
No 284
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.11 E-value=7.2e-06 Score=71.68 Aligned_cols=58 Identities=16% Similarity=0.319 Sum_probs=46.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+++.++ .++...+. . .++.+.++|.|+|+
T Consensus 33 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 33 NSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLK--N----TSDMVYLKVAKPGS 94 (94)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH--T----CCSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEcCCC
Confidence 4677999999999998 6 999999999999999986 44444442 2 24689999999874
No 285
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.10 E-value=1e-05 Score=71.49 Aligned_cols=57 Identities=16% Similarity=0.245 Sum_probs=52.3
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVH 731 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~ 731 (775)
.+||.++.+||||++.| |+.||.|++|||+.+..+ ++.++++++.+.|.+++|+++.
T Consensus 29 ~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 29 YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 46999999999999987 799999999999999755 8999999999999999999765
No 286
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.10 E-value=1.2e-06 Score=79.11 Aligned_cols=66 Identities=18% Similarity=0.226 Sum_probs=51.3
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREIELQVG 636 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~ 636 (775)
..+++|..|.++|||++ + |++||+|++|||+++.++ .++..++. . .++.+.|+|.|+++.+.+.+.
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~~~~v~l~v~R~~~~~~~~v~ 104 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIR--H----GGKKMRFLVAKSDVETAKKIH 104 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHH--T----CCSEEEEEEECCCHHHHHHHS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCcceeEEEE
Confidence 35677999999999998 6 999999999999999864 44444442 2 268899999999876555444
No 287
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.10 E-value=3.9e-06 Score=75.50 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=49.3
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |++||+|++|||++|.+ +.++..++.. . ++.+.|+|.|+++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~-----g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 44 TGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN-A-----GNPVRLLLIRRLPL 106 (108)
T ss_dssp CCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-H-----CSEEEEEEEECCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C-----CCeEEEEEEeCCcC
Confidence 4667999999999998 6 99999999999999998 4666666643 2 67899999998864
No 288
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.10 E-value=2.2e-06 Score=79.09 Aligned_cols=62 Identities=15% Similarity=0.183 Sum_probs=48.7
Q ss_pred cceEEEEEEcCCChHhh--hccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEE
Q 004068 565 RQVLRVKGCLAGSKAEN--MLEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREIE 632 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~--aLq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~ 632 (775)
..+++|..|.++|||++ +|+.||+|++|||+++.++ .++..+++. .++++.|+|.|+|+..+
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~------~~~~v~l~v~r~g~~~~ 117 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN------ASGSIEMQVVAGGDVSE 117 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH------CCSEEEEEEECCTTSSS
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEECCccce
Confidence 35677999999999996 3999999999999999885 444444432 25679999999987543
No 289
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.09 E-value=5.8e-06 Score=76.29 Aligned_cols=60 Identities=25% Similarity=0.207 Sum_probs=51.9
Q ss_pred eEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 567 VLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.++|..|.++|||++ + |++||+|++|||++|.+ +.++..+++...+ ++.+.|+|.|+++.
T Consensus 46 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~----g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 46 PPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSI----TSKVTLEIEFDVAE 109 (122)
T ss_dssp CCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTT----TTCEEEEEEEECCC
T ss_pred CcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC----CCeEEEEEEECCcc
Confidence 356999999999998 6 99999999999999988 9999998876542 67899999998763
No 290
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.09 E-value=7.4e-06 Score=73.95 Aligned_cols=63 Identities=17% Similarity=0.289 Sum_probs=50.9
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
..+++|..|.++|||++ + |+.||+|++|||+++.+ +.++..+++.... .++.+.|+|.|.++.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~---~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVH---KPGPIVLTVAKSGGG 98 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHT---SSSCEEEEEECCCC-
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc---CCCeEEEEEEeCCCC
Confidence 35677999999999998 6 99999999999999999 8888888865410 034699999997653
No 291
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.09 E-value=1.8e-06 Score=77.14 Aligned_cols=59 Identities=29% Similarity=0.308 Sum_probs=50.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
..++|..|.++|||+++ |++||+|++|||++|.+ +.++..++.. .++.+.|+|.|+++.
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKA------ASYQLCLKIDRAETR 90 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTT------CCSEEECEECCCTTT
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCeEEEEEEECCeE
Confidence 35668999999999986 99999999999999999 8888888732 257899999998864
No 292
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.08 E-value=8.1e-06 Score=81.07 Aligned_cols=72 Identities=15% Similarity=0.212 Sum_probs=57.1
Q ss_pred cceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEe---cCeEEEEEEEeccc
Q 004068 565 RQVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFR---QGREIELQVGTDVR 640 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R---~Gk~~~l~V~l~~~ 640 (775)
..+++|..|.++|||+++|+.||+|++|||+++.++........... .++.+.|+|.| +|+..++.+.+...
T Consensus 23 ~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~~~~~~~~~~~----~~~~v~l~v~r~~~~G~~~~~~v~~~~~ 97 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKT----FQNTVELIIVREVGNGAKQEIRVRVEKD 97 (195)
T ss_dssp CCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCCHHHHHHHHHH----CCSEEEEEEEEECSSSCEEEEEEEEECC
T ss_pred CCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCCHHHHHHHHHc----CCCeEEEEEEEcCCCCCCceeEeEeecc
Confidence 35677999999999999999999999999999998754333222222 25689999999 99999888887643
No 293
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.08 E-value=6.7e-06 Score=74.70 Aligned_cols=57 Identities=9% Similarity=0.152 Sum_probs=46.0
Q ss_pred EEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 568 LRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 568 l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
++|..|.++|||+++ |++||+|++|||++|. ++.++..++.... +..+.++|.|...
T Consensus 46 v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~-----~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 46 VQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFG-----EDEIEMKVVSLLD 105 (109)
T ss_dssp CEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-----TSCEEEEEESCC-
T ss_pred eEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-----CCeEEEEEEECCC
Confidence 458999999999996 9999999999999999 5588887774322 3458999988543
No 294
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.08 E-value=7.9e-06 Score=95.24 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=62.0
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEEEecccC
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGREIELQVGTDVRD 641 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V~l~~~~ 641 (775)
.+++|..|.++|||+++ |++||+|++|||++| ++.++..++...+ .|+++.++|.|+|+.+++++++...+
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~----~g~~v~l~v~R~g~~~~~~v~l~~~~ 567 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYI----PGDTVTIHAFRRDELMTLELTWQEPA 567 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCC----TTCEEEEEEEETTEEEEEEEECCCCC
T ss_pred CeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcC----CCCEEEEEEEECCEEEEEEEEecCCC
Confidence 46779999999999996 999999999999999 5889999886544 37899999999999999999887553
No 295
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=98.08 E-value=3.4e-05 Score=76.89 Aligned_cols=154 Identities=12% Similarity=0.067 Sum_probs=96.4
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEe-----EEEEEEeCCCcEEEEEeCCCCCCccccccee
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIP-----GEVVFLHPVHNFALIAYDPSSLGVAGASVVR 389 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~-----A~Vv~~dp~~DlAILk~d~~~l~~~~~~~v~ 389 (775)
...|+|++|.. ..+.++||++|++..+...+.. ..+ +..++ ..+-..|+..|+||+++++.-.. .-.++
T Consensus 26 ~h~G~g~~V~~-~G~~~LlTA~Hv~~~~~~~~~~-~k~-g~~ip~~~~~~~~~~~d~~~D~all~vp~~~~s---~lg~~ 99 (191)
T 1zyo_A 26 TTIGFGCRTKI-DGEDCLLTAHHVWCNSMRPTGL-AKA-GKQVSVEDWEISMSSSDKMLDFAIVRVPTHVWS---KLGVK 99 (191)
T ss_dssp EEEEEEEEEEC---CEEEEECHHHHTSSSCCCEE-EET-TEEEECCSCEEEEEECCTTTCEEEEECCHHHHH---HHTCC
T ss_pred eEEEEEEEEEE-CCCcEEEEChhhCcCCcceeee-cCC-CCEEEcccceeeEccCCCCCcEEEEEcCCChhh---hcCcc
Confidence 46899999973 3467999997765443222322 233 55554 34445678899999999864111 11345
Q ss_pred eeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceEEEEEeeccCCCC-CceEEccCce
Q 004068 390 AAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTDFGSTF-SGVLTDEHGR 468 (775)
Q Consensus 390 ~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~i~~~~-GGpL~d~~G~ 468 (775)
++.|.+ ...++.|-++|++.+..+....|+..- . .. -..++.++...+|. |.|++|.+ .
T Consensus 100 ~a~~~~---~~~~~~vt~yg~~~~~~~~s~~g~~~~-----~--~~---------~~~~~~~~~T~~G~SGsP~~ng~-~ 159 (191)
T 1zyo_A 100 STPLVC---PSSKDVITCYGGSSSDCLMSGVGSSST-----S--EF---------TWKLTHTCPTAAGWSGTPLYSSR-G 159 (191)
T ss_dssp CCCBCC---CCSCEEEEEEEESSTTSEEEEEEEEEE-----C--SS---------TTEEEECCCCCTTCTTCEEECSS-C
T ss_pred eeEeec---CCCCccEEEEeecCCCCEeecccceee-----c--cC---------CcEEEEEcCCCCCCCCCcEEcCC-e
Confidence 566754 346999999999877776655553321 0 11 13566777666665 99999986 7
Q ss_pred EEEEeeeecccccccCCCCCCceeeeccccchhhhH
Q 004068 469 VQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRV 504 (775)
Q Consensus 469 VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~v 504 (775)
||||+..+... -.+++|+-+..++.+
T Consensus 160 IVGvh~G~~~~----------~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 160 VVGMHVGFEEI----------GKLNRGVNMFYVANY 185 (191)
T ss_dssp EEEEEEEEEET----------TTEEEEECHHHHHHH
T ss_pred EEEEEeCcccC----------CceeeeeehHHHhhh
Confidence 78998865322 124566766666654
No 296
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.07 E-value=5.2e-06 Score=73.97 Aligned_cols=57 Identities=21% Similarity=0.259 Sum_probs=49.7
Q ss_pred eEEEEEEcCCChHhh-h-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 567 VLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
+++|..|.++|||++ + |+.||+|++|||+++ .++.++..+++... .++.+.|+|.|.
T Consensus 38 ~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~ 98 (101)
T 2yt7_A 38 TAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK----SQTSVTLSIVHC 98 (101)
T ss_dssp CEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT----TSSEEEEEECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC----CCCeEEEEEEeC
Confidence 467999999999998 6 999999999999999 89999999987653 267899999874
No 297
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.06 E-value=3e-06 Score=75.93 Aligned_cols=58 Identities=19% Similarity=0.170 Sum_probs=49.0
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
+++|..|.++|||+++ |+.||+|++|||+++.++. ++..++.. .++.+.++|.|+++.
T Consensus 27 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~r~~~~ 87 (106)
T 3ngh_A 27 GHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK------SGNSVTLLVLDGDSY 87 (106)
T ss_dssp SCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHH------TTTEEEEEEECHHHH
T ss_pred CEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCEEEEEEEECCee
Confidence 4569999999999996 9999999999999999987 67666642 267899999998754
No 298
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.06 E-value=7.6e-06 Score=74.46 Aligned_cols=59 Identities=19% Similarity=0.335 Sum_probs=49.6
Q ss_pred ceEEEEEEcCCChHhhh-c-cCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-L-EQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-L-q~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ | +.||+|++|||++|. ++.++..++... ++++.|+|.|++++
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~------~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM------HGTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC------CEEEEEEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEEECCcc
Confidence 45679999999999985 7 999999999999999 677888877532 46799999998864
No 299
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.06 E-value=1.2e-05 Score=72.16 Aligned_cols=61 Identities=16% Similarity=0.273 Sum_probs=48.9
Q ss_pred ccceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 564 RRQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 564 ~~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
...+++|..|.++|||++ + |+.||+|++|||+++.+ +.++..++. . .++.+.++|.|+++.
T Consensus 36 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 36 DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMT--R----TSSVVTLEVAKQGAI 100 (106)
T ss_dssp SSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH--T----CCSEEEEEEECCCSS
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCcc
Confidence 346778999999999998 6 99999999999999985 444444442 2 368899999998764
No 300
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.06 E-value=2.1e-06 Score=78.03 Aligned_cols=65 Identities=14% Similarity=0.204 Sum_probs=51.0
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREIELQV 635 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V 635 (775)
..+++|..|.++|||++ + |+.||+|++|||+++.++ .++..++.. .++.+.++|.|+++..++.+
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~------~g~~v~l~v~R~~~~~~~~v 102 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN------TKGRVRFMIGRERPGEQSEV 102 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH------SCSSCEEEEEECCCCTTSSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc------CCCeEEEEEEeCCCCCcchh
Confidence 46778999999999998 6 999999999999999874 444444432 26789999999987654443
No 301
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.05 E-value=7.9e-06 Score=71.01 Aligned_cols=59 Identities=19% Similarity=0.146 Sum_probs=43.2
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |+.||+|++|||+++.+ +.++...+... .+..+.+++.|+++
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-----~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA-----LNAVRLLVVDPETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-----SSEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-----CCcEEEEEEcCCcc
Confidence 45679999999999996 99999999999999998 45655555321 13334444455554
No 302
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.05 E-value=1.3e-05 Score=70.56 Aligned_cols=56 Identities=21% Similarity=0.200 Sum_probs=47.8
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
.+++|..|.++|||+++ |++||+|++|||+++.+ +.++..++... ++.+.|+|.|+
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~------~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS------GNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT------TTEEEEEEECC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC------CCeEEEEEEEC
Confidence 56779999999999996 99999999999999999 58888887543 35789988875
No 303
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.04 E-value=1.2e-05 Score=71.31 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=47.6
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
..+++|..|.++|||++ + |+.||+|++|||+++.++ .++..++. . .++.+.++|.|+++
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR--N----AGYAVSLRVQHRLE 98 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH--T----CCSEEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH--h----CCCeEEEEEEeCCC
Confidence 35677999999999997 6 999999999999999986 44444442 2 26789999999875
No 304
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.04 E-value=1e-05 Score=71.28 Aligned_cols=59 Identities=20% Similarity=0.249 Sum_probs=48.9
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |++||+|++|||+++.+ +.++..++. . .++.+.|+|.|+++.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~--~----~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ--M----AGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH--T----CCSEEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCCC
Confidence 4566999999999998 6 99999999999999975 567766664 2 368899999998864
No 305
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.04 E-value=7e-06 Score=71.89 Aligned_cols=59 Identities=19% Similarity=0.309 Sum_probs=47.6
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |+.||+|++|||+++.++ .++..++.. .++.+.+.+.|.+..
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~------~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK------GGDQTTLLVLDKELE 90 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHT------TTTEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCeEEEEEECCccc
Confidence 36679999999999996 999999999999999999 788877753 256777777776543
No 306
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.04 E-value=9.1e-06 Score=71.27 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=46.6
Q ss_pred cceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChhh--HHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 565 RQVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFHD--IENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~d--l~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
..+++|..|.++|||+++|++||+|++|||+++.++.+ +..++. . .++.+.|+|.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLK--T----FQNTVELIIVREV 93 (95)
T ss_dssp CCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCBHHHHHHHHH--H----CCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCCCHHHHHHHhh--c----CCCeEEEEEEeCC
Confidence 35677999999999999999999999999999998544 333332 2 2688999999864
No 307
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.04 E-value=1.2e-05 Score=70.60 Aligned_cols=58 Identities=16% Similarity=0.213 Sum_probs=47.6
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.+ +.++..++.. .++.+.++|.|++.
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~------~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN------TGQVVHLLLEKGQS 94 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS------CCSEEEEEEECCSC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEcCCC
Confidence 4667999999999998 6 99999999999999994 4666665532 26789999999764
No 308
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.03 E-value=1.4e-05 Score=70.95 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=49.7
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeEE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGREI 631 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~ 631 (775)
..+++|..|.++|||++ + |++||+|++|||+++.+ +.++..++.. .++.+.|+|.|+++..
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~------~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE------AGPVVRLVVRRRQPPP 97 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH------SCSEEEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEeCCCCC
Confidence 35677999999999998 6 99999999999999987 5555555532 2688999999988653
No 309
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.03 E-value=1.2e-05 Score=72.09 Aligned_cols=58 Identities=22% Similarity=0.377 Sum_probs=49.1
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
+++|..|.++|||+++ |+.||+|++|||+++. ++.++..++.. .++.+.|+|.|.+.+
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA------GEKELILTVLSVESE 104 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH------CSSEEEEEEECSSCC
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCEEEEEEEcCCCC
Confidence 4459999999999996 9999999999999999 77888888753 267899999997653
No 310
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.03 E-value=7.6e-06 Score=73.21 Aligned_cols=57 Identities=14% Similarity=0.178 Sum_probs=48.6
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |+.||+|++|||++|.+ +.++..+++. ++.+.|+|.|+..
T Consensus 41 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-------~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-------AREISMRVRFFSG 100 (104)
T ss_dssp CCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH-------SSSEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-------CCEEEEEEEECCC
Confidence 45669999999999986 99999999999999999 8888887753 4679999988754
No 311
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.01 E-value=1.1e-05 Score=73.37 Aligned_cols=59 Identities=17% Similarity=0.166 Sum_probs=47.4
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |+.||+|++|||++|.++ .++...+. . .++.+.|+|.|+++.
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~--~----~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIK--N----GGRRVRLFLKRGETS 111 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHH--T----TTTEEEEEEECCEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCcc
Confidence 4677999999999998 6 999999999999999876 44444442 2 267899999998754
No 312
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.01 E-value=1.2e-05 Score=74.23 Aligned_cols=59 Identities=22% Similarity=0.325 Sum_probs=49.9
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
.+++|..|.++|||++ + |+.||+|++|||++|. ++.++..+++... .++.+.|+|.|++
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVP----IGQSVNLVLCRGY 106 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSC----TTCEEEEEEEESC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC----CCCeEEEEEEeCC
Confidence 4567999999999998 6 9999999999999998 5778888886443 2688999999986
No 313
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.01 E-value=8.6e-06 Score=70.63 Aligned_cols=58 Identities=16% Similarity=0.292 Sum_probs=47.1
Q ss_pred eEEEEEEcCCChHhh-h-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 567 VLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
.++|..|.++|||++ + |++||+|++|||+++ .++.++..++.... .++.+.++|.|.+
T Consensus 28 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~----~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 28 PIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAA----KQGHVNLTVRQTR 89 (90)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH----HHTEEEEEEEECC
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC----CCCeEEEEEEecc
Confidence 366999999999998 6 999999999999999 55778777775433 1347999998864
No 314
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.00 E-value=1.4e-05 Score=70.60 Aligned_cols=52 Identities=19% Similarity=0.236 Sum_probs=43.6
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIF 625 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~ 625 (775)
++++|..|.++|||+++ |+.||+|++|||++|.+ ++++..++. ...+.++|.
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~--------~~~l~ltV~ 89 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLS--------QPSLGLLVR 89 (94)
T ss_dssp CEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHH--------SSEEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh--------CCeEEEEEE
Confidence 56779999999999996 99999999999999995 688888773 355677664
No 315
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.00 E-value=9.8e-06 Score=72.31 Aligned_cols=59 Identities=27% Similarity=0.335 Sum_probs=47.6
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |+.||+|++|||++|.++ .++..++.. .++.+.|+|.|+++.
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~------~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA------GGPQLHLVIRRPLSG 100 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH------TCSEEEEEECCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEECCCC
Confidence 4566999999999998 6 999999999999999985 455544432 267899999998763
No 316
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.00 E-value=1.7e-05 Score=74.22 Aligned_cols=60 Identities=20% Similarity=0.273 Sum_probs=50.8
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.+++||++ + |++||+|++|||+++.+ +.++..++.... .++.+.|+|.|++.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESK----PEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTS----SSSEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcC----CCCEEEEEEEcCCC
Confidence 4677999999999998 6 99999999999999975 578888886553 26889999999764
No 317
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.99 E-value=5.4e-06 Score=74.08 Aligned_cols=60 Identities=20% Similarity=0.321 Sum_probs=48.9
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||++|.+ +.++..++....+ ++.+.|+|.|+++
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~----g~~v~l~v~R~~~ 97 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAAR----NGQVNLTVRRKVL 97 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHH----HTEEEEEEEEECC
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC----CCcEEEEEEeCCC
Confidence 3456999999999998 6 99999999999999965 7777777754321 5789999999865
No 318
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=97.99 E-value=1.4e-05 Score=73.32 Aligned_cols=58 Identities=14% Similarity=0.236 Sum_probs=48.6
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+.+. ++.++..+++ . .++.+.|+|.|+++
T Consensus 54 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~--~----~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 54 NSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILK--N----TSEVVYLKVGKPTT 115 (117)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH--T----CCSEEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCc
Confidence 4677999999999998 6 9999999999999999 6666666663 2 26789999999865
No 319
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=97.99 E-value=6.9e-06 Score=76.18 Aligned_cols=62 Identities=18% Similarity=0.110 Sum_probs=53.0
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGREIE 632 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~ 632 (775)
.+++|..|.++|||+++ |+.||+|++|||+++.+ +.++..++.... +..+.++|.|+|+...
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-----~~~~~l~v~R~g~~~~ 97 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG-----DETKLLVVDRETDEFF 97 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTC-----SEEEEEEECHHHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-----CCEEEEEEEeCCcceE
Confidence 36779999999999996 99999999999999999 899988885432 5678899999987654
No 320
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.98 E-value=1.1e-05 Score=75.08 Aligned_cols=62 Identities=18% Similarity=0.272 Sum_probs=53.3
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGREIE 632 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~ 632 (775)
..+++|..|.++|||++ + |+.||+|++|||+++.+ +.++..++.. . ++.+.|+|.|+++..+
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~-~-----~~~v~l~v~R~~~~~~ 110 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN-A-----GQVVHLTLVRRKTSSS 110 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-C-----CSSEEEEEEEESSSSS
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C-----CCeEEEEEEeCCcccc
Confidence 35677999999999997 6 99999999999999999 8888888864 2 6789999999887543
No 321
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=97.98 E-value=1e-05 Score=72.21 Aligned_cols=56 Identities=25% Similarity=0.263 Sum_probs=46.5
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEE
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIF 625 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~ 625 (775)
..+|..|.++|||+++ |++||+|++|||++|. +|+++...+..... .++.+.|.|.
T Consensus 40 ~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~---~g~~v~LLV~ 98 (101)
T 3qik_A 40 AVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFC---SRRPLRLLVA 98 (101)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHH---TTCCEEEEEE
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhc---cCCeEEEEEe
Confidence 4569999999999996 9999999999999984 99999998865411 2677888775
No 322
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=97.97 E-value=1.2e-05 Score=71.51 Aligned_cols=56 Identities=25% Similarity=0.354 Sum_probs=47.7
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
++++|..|.++|||++ + |++||+|++|||++|.+ ++++..++... ++++.|+|.+.
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~------~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET------KGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC------CEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEEEC
Confidence 4677999999999998 6 99999999999999996 99999888542 45788888764
No 323
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=97.97 E-value=1.6e-05 Score=70.06 Aligned_cols=58 Identities=17% Similarity=0.215 Sum_probs=44.4
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
.+++|..|.++|||++ + |++||+|++|||++|.++.+......... .++++.++|.|.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~----~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG----ANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT----CSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc----CCCcEEEEEEeC
Confidence 3567999999999998 6 99999999999999987544433222222 256799999985
No 324
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=97.96 E-value=4.4e-06 Score=76.07 Aligned_cols=64 Identities=17% Similarity=0.123 Sum_probs=52.5
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEEEE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREIELQV 635 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l~V 635 (775)
.+++|..|.++|||+++ |+.||+|++|||++|.++ .++...+.. .++++.++|.|+++..++.+
T Consensus 38 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~R~~~~~~~~~ 104 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK------SGNSVTLLVLDGDSYEKAVK 104 (114)
T ss_dssp CSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHH------TCSEEEEEEECHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCEEEEEEEECCcceehhh
Confidence 45669999999999996 999999999999999985 777776642 26889999999887654433
No 325
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=97.96 E-value=1.2e-05 Score=71.62 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=46.7
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.++........... .++.+.++|.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~----~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN----AGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT----SCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc----CCCeEEEEEEECcc
Confidence 4677999999999998 6 99999999999999977655443332222 26789999998754
No 326
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=97.95 E-value=2.3e-05 Score=70.59 Aligned_cols=57 Identities=18% Similarity=0.241 Sum_probs=47.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
.+++|..|.++|||+++ |+.||+|++|||++|.++ .++..++.. .++.+.++|.|.+
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~------~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ------GGNTLMVKVVMVT 104 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHH------TTTEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCEEEEEEEECC
Confidence 46779999999999995 999999999999999999 777776643 2567888888743
No 327
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.95 E-value=1.6e-05 Score=71.37 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=47.7
Q ss_pred ccceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 564 RRQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 564 ~~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
...+++|..|.++|||++ + |+.||+|++|||+++.++ .++..++.. .++.+.|+|.|++.
T Consensus 38 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~------~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 38 EKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN------TKGNVRFVIGREKP 101 (107)
T ss_dssp CEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH------CCSEEEEEEEEECC
T ss_pred CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc------CCCeEEEEEEeCCC
Confidence 346778999999999998 6 999999999999999864 444444432 26889999999764
No 328
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=97.95 E-value=2.2e-05 Score=73.20 Aligned_cols=59 Identities=19% Similarity=0.298 Sum_probs=49.8
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
.+++|..|.++|||++ + |+.||+|++|||+.|.+ +.++..++.... .++.+.|+|.|++
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP----IGASVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSC----TTEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC----CCCeEEEEEEeCC
Confidence 4567999999999998 6 99999999999999985 678888886544 2678999999976
No 329
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=97.94 E-value=2.2e-05 Score=68.63 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=48.0
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
..++|..|.++|||++ + |+.||+|++|||+++ .++.++..+++.. ++.+.++|.|..+
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~------~~~v~l~v~~~~~ 89 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS------QGAITFKIIPGSK 89 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC------CEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC------CCeEEEEEEeCCC
Confidence 4567999999999998 6 999999999999999 8888888888542 3578999988654
No 330
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.94 E-value=8.2e-06 Score=74.28 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=49.8
Q ss_pred EEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 568 LRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 568 l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
++|..|.++|||++ + |+.||+|++|||++|.+ +.++..++.. . ++.+.|+|.|+++.
T Consensus 45 ~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~-----g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 45 HKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD-A-----GLSVTLRIIPQEEL 105 (114)
T ss_dssp CEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH-T-----TTEEEEEECCCSCC
T ss_pred eEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-C-----CCeEEEEEEeCCcC
Confidence 35999999999999 6 99999999999999999 5888888864 2 68899999998764
No 331
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.94 E-value=2.2e-05 Score=68.62 Aligned_cols=53 Identities=21% Similarity=0.274 Sum_probs=45.3
Q ss_pred EEEEEcCCChHhhh-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 569 RVKGCLAGSKAENM-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 569 ~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
+|..|.++|||+++ |+.||+|++|||++| .++.++..++.. .++.+.++|.+.
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~p~ 89 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSN------AVGEIHMKTMPA 89 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHH------CCEEEEEEEECC
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEEC
Confidence 48999999999996 999999999999999 578999888852 257788888764
No 332
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.94 E-value=1.8e-05 Score=71.19 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=49.7
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
..+++|..|.++|||++ + |+.||+|++|||+++. ++.++..++.. .++.+.|+|.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~------~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN------TGQVVHLLLEKGQSP 104 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHH------TTSEEEEEEECCCCS
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEeCCcc
Confidence 35677999999999998 6 9999999999999999 66666666643 268899999998764
No 333
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.94 E-value=8.8e-06 Score=72.42 Aligned_cols=59 Identities=19% Similarity=0.318 Sum_probs=48.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |+.||+|++|||++|.++ .++..++.. .++.+.++|.|++..
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK------GGDQTTLLVLDKEAE 91 (102)
T ss_dssp SSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH------STTEEEEEECSTTCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCEEEEEEEECCCc
Confidence 46779999999999996 999999999999999985 677666643 267899999886643
No 334
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.93 E-value=1.3e-05 Score=73.39 Aligned_cols=59 Identities=15% Similarity=0.243 Sum_probs=50.8
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |++||+|++|||+++ .++.++..++. . .++.+.|+|.|+++.
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~--~----~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLA--S----ISEKVRLEILPVPQS 104 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHH--S----CSSEEEEEECCBTTB
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--h----CCCeEEEEEEECCCC
Confidence 3477999999999998 6 999999999999999 66888888885 2 268899999998764
No 335
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=97.93 E-value=1.7e-05 Score=69.50 Aligned_cols=58 Identities=19% Similarity=0.315 Sum_probs=46.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+++.++. ++..++. . .++++.++|.|+|+
T Consensus 33 ~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 33 SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLR--H----TGQTVLLTLMRRGE 94 (97)
T ss_dssp CCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHH--T----CCSEEEEEEEEEEE
T ss_pred CCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCC
Confidence 4566999999999998 6 9999999999999999764 4443432 2 26889999999874
No 336
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=97.93 E-value=5.2e-06 Score=70.96 Aligned_cols=56 Identities=27% Similarity=0.299 Sum_probs=45.6
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
+++|..|.++|||+++ |++||+|++|||+++.++ .++..++. . .++.+.++|.|+.
T Consensus 24 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~---~---~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 24 PCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIG---K---CSGVLHMVIAEGV 82 (83)
T ss_dssp SCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHT---T---CSSCEEEEEECCC
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH---h---CCCeEEEEEEcCC
Confidence 3558999999999986 999999999999999999 66666552 1 2466999998863
No 337
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.93 E-value=1.7e-05 Score=72.53 Aligned_cols=59 Identities=20% Similarity=0.284 Sum_probs=48.3
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |++||+|++|||+++.+ +.++..++. . .++.+.|+|.|+++.
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~--~----~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIIS--Q----QSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHS--C----CSSCEEEEEESSCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh--c----CCCEEEEEEEECCcc
Confidence 4677999999999998 6 99999999999999987 455665552 2 267899999998764
No 338
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=97.93 E-value=2.7e-06 Score=77.43 Aligned_cols=61 Identities=23% Similarity=0.354 Sum_probs=48.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhh--HHHHHHhcCCCCCCCCeEEEEEEec-CeEEEE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHD--IENACQALDKDGEDNGKLDITIFRQ-GREIEL 633 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~d--l~~~l~~~~~~~~~g~~v~l~V~R~-Gk~~~l 633 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++.+ +...+.. ++.+.++|.|+ |+.+.+
T Consensus 41 ~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~-------~~~v~l~v~r~~g~~~~~ 105 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKS-------SRSLTISIVAAAGRELFM 105 (114)
T ss_dssp CSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHH-------CSSEEEEECSSTTTHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc-------CCeEEEEEEcCCCCceEE
Confidence 45779999999999986 99999999999999999965 4444421 35699999998 765433
No 339
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.93 E-value=1.6e-05 Score=69.41 Aligned_cols=57 Identities=21% Similarity=0.309 Sum_probs=48.3
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEe-CChhhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPV-TCFHDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V-~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
.+++|..|.++|||++ + |+.||+|++|||+++ .+++++..++.. .++++.++|.|..
T Consensus 29 ~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~------~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 29 GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRN------ASGSVILKILSGP 88 (91)
T ss_dssp SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHT------CCSSBCEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHc------CCCeEEEEEEECC
Confidence 3566999999999998 5 999999999999999 999999988853 1467888888753
No 340
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.92 E-value=9.8e-06 Score=72.01 Aligned_cols=57 Identities=23% Similarity=0.387 Sum_probs=46.5
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.++|..|.++|||+++ |++||+|++|||++|.+ +.++..++... ++++.|+|.|++.
T Consensus 37 ~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~------~~~v~l~v~R~~~ 96 (100)
T 1whd_A 37 PVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC------PSEIILLVWRVSG 96 (100)
T ss_dssp SCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHC------SSEEEEEEEECCS
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEEECCC
Confidence 4568999999999986 99999999999999995 47777776432 3569999999753
No 341
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.16 E-value=1.3e-06 Score=79.64 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=44.7
Q ss_pred ceEEEEEcCCCHHhH-cCCCCCCEEEEECCeeC--CCHHHHHHHHHhcCCCCEEEEE
Q 004068 675 GVYVARWCHGSPVHR-YGLYALQWIVEINGKRT--PDLEAFVNVTKEIEHGEFVRVR 728 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~-aGL~~GD~I~~VNG~pV--~dl~~f~~~v~~i~~g~~V~L~ 728 (775)
+++|..|.++|||++ +||++||.|++|||+++ .+++++.+.++. .++.++|+
T Consensus 54 gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~--~~~~v~l~ 108 (112)
T 2lob_A 54 PILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFE 108 (112)
Confidence 789999999999999 99999999999999999 557888888876 24447766
No 342
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=97.92 E-value=1.7e-05 Score=69.04 Aligned_cols=58 Identities=21% Similarity=0.254 Sum_probs=46.0
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+++.+. .++..++.. .++.+.++|.|.+.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~------~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC------SLGTVTLEVGRIST 90 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH------CCSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEcccc
Confidence 4566999999999998 6 999999999999999875 444444432 25779999999763
No 343
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.91 E-value=9.5e-06 Score=73.84 Aligned_cols=54 Identities=9% Similarity=0.194 Sum_probs=46.2
Q ss_pred EEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEe
Q 004068 568 LRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFR 626 (775)
Q Consensus 568 l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R 626 (775)
++|..|.+++||+++ |+.||+|++|||++|. +|.++..++.... +..+.|+|.|
T Consensus 38 v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~-----~~~v~l~V~~ 94 (111)
T 1vae_A 38 VQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFG-----GEEVEMKVVS 94 (111)
T ss_dssp CEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTT-----TSEECEEEEC
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-----CceEEEEEEe
Confidence 458899999999986 9999999999999999 9999998886433 4568888876
No 344
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=97.91 E-value=1.5e-05 Score=72.96 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=48.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+++.++.+......... .++.+.++|.|+++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~----~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN----AGQTVTIIAQYKPE 99 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHT----SCSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc----CCCeEEEEEEECCc
Confidence 4677999999999998 6 99999999999999999976554443333 26789999998653
No 345
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=97.90 E-value=0.00035 Score=71.20 Aligned_cols=174 Identities=11% Similarity=0.079 Sum_probs=103.3
Q ss_pred hcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEE----EEEEeC
Q 004068 291 IEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGE----VVFLHP 366 (775)
Q Consensus 291 l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~----Vv~~dp 366 (775)
+..++|.+.-.. || ....-.|+..+ .||+||+|......+.+.|.... |.-.-.. -+..-+
T Consensus 14 ia~~iC~l~n~s------dg---~~~~l~gigyG-----~~iItn~HLf~rnng~L~I~s~h-G~f~v~nt~~lki~~i~ 78 (241)
T 3mmg_A 14 ISACVCLLENSS------DG---HSERLFGIGFG-----PYIIANQHLFRRNNGELTIKTMH-GEFAVANSTQLQMKPVE 78 (241)
T ss_dssp HHTTEEEEEEEE------TT---EEEEEEEEEET-----TEEEECGGGGSSTTCEEEEEETT-EEEEEEEGGGSCEEECT
T ss_pred hhheEEEEEEEe------CC---CEEEEEEEeEC-----CEEEEChhhcccCCCeEEEEECC-ceEEccCCCceeeEEeC
Confidence 445677775432 33 22445566655 58999988877777788898885 4433222 245556
Q ss_pred CCcEEEEEeCCCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceE
Q 004068 367 VHNFALIAYDPSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNME 446 (775)
Q Consensus 367 ~~DlAILk~d~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e 446 (775)
..|+.|+|. |+.+|+ --+-++|.. .+.||+|..||..+.... ...+||+. +...+... -.
T Consensus 79 g~DiiiIrm-PkDfpP----f~~kl~FR~---P~~~E~V~lVg~~fq~k~--~~s~vSes--S~i~p~~~--------~~ 138 (241)
T 3mmg_A 79 GRDIIVIKM-AKDFPP----FPQKLKFRQ---PTIKDRVCMVSTNFQQKS--VSSLVSES--SHIVHKED--------TS 138 (241)
T ss_dssp BSSCEEEEC-CTTSCC----CCSCCCBCC---CCTTCCEEEEEEEECSSC--EEEEEEEE--ECCEECTT--------SS
T ss_pred CccEEEEeC-CCCCCC----cchhcccCC---CCCCCeEEEEEeecccCC--ccEEECCc--ceeEEcCC--------CC
Confidence 789999999 566654 112244532 589999999998765443 23345542 11111111 12
Q ss_pred EEEEeeccCCC-CCceEEcc-CceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHH
Q 004068 447 VIELDTDFGST-FSGVLTDE-HGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDK 507 (775)
Q Consensus 447 ~I~~Da~i~~~-~GGpL~d~-~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~ 507 (775)
+-.--.+...| ||+||++. ||.+|||+...... ...+|.-++|-+-....|+.
T Consensus 139 fWkHwIsT~~G~CGlPlVs~~Dg~IVGiHsl~~~~--------~~~N~F~~f~~~f~~~~L~~ 193 (241)
T 3mmg_A 139 FWQHWITTKDGQAGSPLVSIIDGNILGIHSLTHTT--------NGSNYFVEFPEKFVATYLDA 193 (241)
T ss_dssp EEEECBCCCTTCTTCEEEETTTCCEEEEEEEEETT--------TCCEEEEECCTTHHHHHTTC
T ss_pred EEEEEcCCCCCcCCCeEEEcCCCcEEEEEecccCC--------CCcEEEEcCCHHHHHHHhhC
Confidence 33333333334 69999997 79999999865543 33566556665554444443
No 346
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.90 E-value=4.2e-06 Score=92.67 Aligned_cols=67 Identities=22% Similarity=0.289 Sum_probs=56.5
Q ss_pred ceEEEEEcCCCHHhHcC-CCCCCEEEEECCeeCCCH--HHHHHHHHhcCCCCEEEEEEEEeCCeEEEEEEE
Q 004068 675 GVYVARWCHGSPVHRYG-LYALQWIVEINGKRTPDL--EAFVNVTKEIEHGEFVRVRTVHLNGKPRVLTLK 742 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aG-L~~GD~I~~VNG~pV~dl--~~f~~~v~~i~~g~~V~L~~V~Rdg~~~~ltlk 742 (775)
+++|..|.+||||+++| |++||.|++|||+++.+| +++.+.++...++..++|. +.|++.+..++++
T Consensus 233 g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~-v~r~~~~~~v~l~ 302 (388)
T 3suz_A 233 TVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLN-IVSCPPVTTVLIK 302 (388)
T ss_dssp CCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEE-EEECCSCC-----
T ss_pred CEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccc-cccccccceeeEe
Confidence 68999999999999999 999999999999999998 7889999886667889999 6888887777663
No 347
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.90 E-value=6.2e-06 Score=75.61 Aligned_cols=62 Identities=16% Similarity=0.254 Sum_probs=49.0
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCeEEE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGREIE 632 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~ 632 (775)
.+++|..|.+++||++ + |++||+|++|||++|. ++.++..++.... +..+.+++.|+++..+
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~-----~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR-----EPRQAVIVTRKLTPEA 107 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT-----SSSEEEEEEECCCSSS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-----CCeEEEEEEcCCCccc
Confidence 4566999999999998 6 9999999999999999 4667666664432 4556788889886543
No 348
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=1.3e-05 Score=73.43 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=46.1
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
++++|..|.++|||+++ |++||+|++|||++|.++ .++..++. +..+.|+|.|..
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~--------~~~v~l~v~R~p 101 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLS--------QPSLGLLVRTYP 101 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHT--------SSEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHh--------CCcEEEEEEECC
Confidence 46779999999999996 999999999999999984 57776662 457888888854
No 349
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.88 E-value=7.8e-06 Score=76.21 Aligned_cols=58 Identities=17% Similarity=0.306 Sum_probs=50.0
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
..++|..|.++|||++ + |+.||+|++|||++|. ++.++..++.... .++.+.|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~----~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNIT----IGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCC----SSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC----CCCEEEEEEEEC
Confidence 3566999999999998 5 9999999999999995 8999999885433 378899999997
No 350
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=97.88 E-value=1.6e-05 Score=71.61 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=45.1
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
.+++|..|.++|||++ + |++||+|++|||++|.+..+......... .++++.++|.|..
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~----~~~~v~l~v~R~~ 85 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG----ANGKVSMEVTRPK 85 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS----CBSCEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC----CCCeEEEEEEeCC
Confidence 4567999999999998 6 99999999999999987544443332222 2567999998853
No 351
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=97.88 E-value=3e-05 Score=67.22 Aligned_cols=55 Identities=15% Similarity=0.231 Sum_probs=43.1
Q ss_pred ceEEEEEEcCCChHhhh--ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEe
Q 004068 566 QVLRVKGCLAGSKAENM--LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFR 626 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a--Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R 626 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++. ++..++. . .++.+.++|.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~--~----~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALK--K----TGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHH--T----CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--h----CCCeEEEEEEE
Confidence 45679999999999973 9999999999999998753 3333442 2 25778888877
No 352
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.87 E-value=1.1e-05 Score=71.70 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=46.2
Q ss_pred ceEEEEEEcCCChHhhh--ccCCCEEEEECCEEeCCh-hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM--LEQGDMMLAINKQPVTCF-HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a--Lq~GDiILsVNGk~V~s~-~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
..++|..|.++|||+++ |++||+|++|||+++.++ .++...+. . .++.+.|+|.|+++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~--~----~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIK--G----SFRILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHH--T----CCSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHH--h----CCCeEEEEEEeCCC
Confidence 45679999999999984 999999999999999985 44444442 1 25779999999875
No 353
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.85 E-value=1.7e-05 Score=72.11 Aligned_cols=59 Identities=15% Similarity=0.246 Sum_probs=48.4
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |+.||+|++|||++|.+ +.++..++.. .++.+.|+|.|+++.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~------~~~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQ------TPQKVRLVVYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHT------CCSEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCeEEEEEEeCCcc
Confidence 4677999999999998 6 99999999999999998 4566555531 247899999998864
No 354
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=3.1e-05 Score=67.43 Aligned_cols=58 Identities=17% Similarity=0.301 Sum_probs=46.1
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+++.+ +.++..++.. .++.+.++|.|++.
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~------~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKA------AQGSVKLVVRSGPS 91 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHH------CCSEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCcEEEEEEeCCC
Confidence 4566999999999998 4 99999999999999996 4566655532 14679999988753
No 355
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.84 E-value=1.7e-05 Score=72.41 Aligned_cols=58 Identities=16% Similarity=0.258 Sum_probs=45.8
Q ss_pred ceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+.+|++||+|++|||++|.++. ++..++.. .++.+.|+|.|.++
T Consensus 46 ~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~------~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 46 TSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSFAVQQLRK------SGKIAAIVVKRPRK 105 (117)
T ss_dssp CBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHHHHHHHHHH------SCSEEEEEEEEEEE
T ss_pred CCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHHHHHHHHhc------CCCeEEEEEEECCc
Confidence 456799999999998459999999999999998864 44444432 26789999999654
No 356
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.84 E-value=3.7e-05 Score=67.84 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=46.2
Q ss_pred eEEEEEEcCCChHhh-hccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 567 VLRVKGCLAGSKAEN-MLEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~-aLq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
+++|..|.++ |++ +|++||+|++|||++|.++ .++..+++..+ .++.+.|+|.|+++.
T Consensus 33 Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~----~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 33 GQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCP----IGSETSLIIHRGSGP 93 (96)
T ss_dssp EEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSC----TTSEEEEEEECCSSC
T ss_pred CEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC----CCCEEEEEEEECCCC
Confidence 4668898873 555 4999999999999999875 78888886543 268899999998753
No 357
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.84 E-value=1.5e-05 Score=70.83 Aligned_cols=59 Identities=14% Similarity=0.110 Sum_probs=47.6
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.++ .++..++. . .++.+.|+|.|+++.
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK--S----GGRRVRLLLKRGTGS 98 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH--H----HCSEECEEEECTTCS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEECCCC
Confidence 4677999999999998 6 999999999999999985 44444443 1 267899999998753
No 358
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=97.82 E-value=1.4e-05 Score=71.13 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=46.5
Q ss_pred cceEEEEEEcCCChHhhhccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 565 RQVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
..+++|..|.++|||+++|++||+|++|||+++.++. ++...+. . .++.+.|+|.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~~~~~~~--~----~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLK--T----FQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCHHHHHHHHH--H----CCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCHHHHHHHhh--c----CCCeEEEEEEecC
Confidence 3567799999999999999999999999999998854 4444442 2 2688999999863
No 359
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.82 E-value=2.9e-05 Score=71.24 Aligned_cols=60 Identities=15% Similarity=0.157 Sum_probs=48.6
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
..+++|..|.++|||++ + |+.||+|++|||++|.++. ++..++.. .++.+.|+|.|+++.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~------~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN------AGYAVSLRVQHRLQV 109 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH------HCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEeCCcC
Confidence 35677999999999998 6 9999999999999999965 55555532 257899999998763
No 360
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.82 E-value=1.9e-05 Score=82.62 Aligned_cols=58 Identities=17% Similarity=0.276 Sum_probs=50.7
Q ss_pred ceEEEEEcCCCHHhH-cCCCCCCEEEEECCeeCCC--HHHHHHHHHhcCCCCEEEEEEEEeCCe
Q 004068 675 GVYVARWCHGSPVHR-YGLYALQWIVEINGKRTPD--LEAFVNVTKEIEHGEFVRVRTVHLNGK 735 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~-aGL~~GD~I~~VNG~pV~d--l~~f~~~v~~i~~g~~V~L~~V~Rdg~ 735 (775)
+++|..|.+||||++ +||++||+|++|||+++.+ +++++..++.. ++.|+|+ |.|.+.
T Consensus 104 gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~--g~~V~L~-V~R~~~ 164 (263)
T 1z87_A 104 PILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT--GKEVVLE-VKYMKE 164 (263)
T ss_dssp EEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC--CSCCCEE-EECCSS
T ss_pred CEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC--CCeEEEE-EEeCcc
Confidence 899999999999999 7999999999999999998 48889999883 6779998 566443
No 361
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=97.82 E-value=4.6e-05 Score=70.04 Aligned_cols=57 Identities=11% Similarity=0.164 Sum_probs=48.1
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
..+++|..|.++|||++ + |++||+|++|||+++. ++.++..+++. .++++.|+|.|.
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~------~~~~v~L~v~R~ 112 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR------TSSSIVLKALEV 112 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS------CCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEEC
Confidence 45677999999999998 6 9999999999999999 77777777742 257799999884
No 362
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.81 E-value=3.4e-05 Score=69.45 Aligned_cols=58 Identities=21% Similarity=0.309 Sum_probs=48.0
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
..+++|..|.++|||++ + |++||+|++|||+++.+ +.++..+++... ++.+.|+|.|.
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-----~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVP-----PGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSC-----SEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-----CCeEEEEEEcC
Confidence 35677999999999998 6 99999999999999965 777777775433 45799999884
No 363
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.81 E-value=2.2e-05 Score=72.53 Aligned_cols=59 Identities=19% Similarity=0.208 Sum_probs=46.9
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |++||+|++|||++|.++ .++..++. . .++.+.|+|.|+++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~--~----~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIK--T----APSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHH--H----SCSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEeCCCc
Confidence 4677999999999998 6 999999999999999774 44434442 2 246899999998764
No 364
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=97.81 E-value=4.8e-05 Score=65.92 Aligned_cols=56 Identities=25% Similarity=0.363 Sum_probs=46.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
.+++|..|.++|||++ + |+.||+|++|||+++ .+++++..+++.. ++++.|++.+.
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~------~~~v~L~v~~~ 80 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS------RGKLQLVVLRD 80 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT------TTEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEeCC
Confidence 3577999999999998 6 999999999999999 7788888887542 46788887764
No 365
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.80 E-value=1.1e-05 Score=89.60 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=50.1
Q ss_pred ceEEEEEcCCCHHhHcCCCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCCeE
Q 004068 675 GVYVARWCHGSPVHRYGLYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNGKP 736 (775)
Q Consensus 675 gV~Vs~V~~GSPA~~aGL~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg~~ 736 (775)
.++|..|.+||||++|||++||+|++|||++|.+++ +.+.++. +|+.++|. +.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~~~l~~--~g~~v~l~-v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ESELLQG--STRQLQIG-VYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GGGGTSC--SCEEEEEE-EEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HHHHhhC--CCCEEEEE-EEeCCcc
Confidence 368999999999999999999999999999999985 6666665 68999999 6777753
No 366
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=97.80 E-value=3.4e-05 Score=71.64 Aligned_cols=58 Identities=28% Similarity=0.373 Sum_probs=49.7
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC---ChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT---CFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~---s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.+++||++ + |+.||+|++|||++|. ++.++..++.. .++.+.|+|.|+..
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~------~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ------TTGSLRLIVAREPV 116 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH------CCSEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc------CCCeEEEEEEcCCC
Confidence 4678999999999998 6 9999999999999998 78888777753 26789999999753
No 367
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.79 E-value=7.4e-06 Score=76.02 Aligned_cols=58 Identities=19% Similarity=0.339 Sum_probs=49.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |++||+|++|||++|. ++.++..++.. .++.+.|+|.|+++
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~------~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQN------SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHT------CTTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCEEEEEEEECCC
Confidence 34568999999999996 9999999999999998 88888888742 26889999999875
No 368
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=97.79 E-value=3.9e-05 Score=76.38 Aligned_cols=57 Identities=19% Similarity=0.334 Sum_probs=49.9
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |+.||+|++|||++|.+ +.++..++. .++.+.++|.|+|+
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~-------~~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIR-------TEKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHT-------SSSEEEEEEEECCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHc-------CCCeEEEEEEECCc
Confidence 46779999999999995 99999999999999999 877777663 25789999999987
No 369
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.79 E-value=3.2e-05 Score=69.98 Aligned_cols=61 Identities=18% Similarity=0.382 Sum_probs=50.2
Q ss_pred eEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 567 VLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.++|..|.+++||++ + |+.||+|++|||+++.. +.++..+++..... .+..+.+++.|+++
T Consensus 42 ~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r--~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 42 LVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLR--SESPWEIAFIRSGP 106 (109)
T ss_dssp SEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCS--SSSCEEEEEECCCC
T ss_pred CEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccC--CCceEEEEEEeCCC
Confidence 467999999999998 6 99999999999999987 77888888654311 25779999999764
No 370
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.79 E-value=4.1e-05 Score=65.85 Aligned_cols=55 Identities=16% Similarity=0.260 Sum_probs=42.9
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFR 626 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R 626 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.++ .++..++.. .++++.++|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~------~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ------QRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHH------CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEE
Confidence 4567999999999998 5 999999999999999654 566665532 25677777754
No 371
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=97.78 E-value=2.7e-05 Score=72.44 Aligned_cols=60 Identities=18% Similarity=0.279 Sum_probs=49.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhc-----CCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQAL-----DKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~-----~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.+++||++ + |+.||+|++|||+.+.+ +.++..+++.. . .++.+.|+|.|++.
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~----~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGN----IRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHH----HTCEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccC----CCCEEEEEEEeCCC
Confidence 4677999999999998 6 99999999999999988 55777777543 1 15789999999875
No 372
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.78 E-value=4.4e-05 Score=68.51 Aligned_cols=58 Identities=12% Similarity=0.195 Sum_probs=45.6
Q ss_pred ceEEEEEEcCCChHhhh--ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM--LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a--Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |+.||+|++|||+++.++ .++..++.. .++.+.|+|.|.+.
T Consensus 41 ~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~------~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 41 EGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT------AKEPIVVQVLRRTS 102 (107)
T ss_dssp CCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH------CCSSEEEEEEECCS
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCcEEEEEEeCCC
Confidence 56679999999999984 999999999999999774 444444432 25779999998753
No 373
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.78 E-value=2.8e-05 Score=69.60 Aligned_cols=58 Identities=21% Similarity=0.198 Sum_probs=47.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+++.+ +.++..++. . .++.+.|+|.|++.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~---~---~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLT---A---ASPTIALLLEREAG 99 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHT---S---CCSCEEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH---c---CCCeEEEEEEECCC
Confidence 4567999999999998 6 99999999999999988 666666662 1 25779999999753
No 374
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.78 E-value=3.2e-05 Score=69.82 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=47.7
Q ss_pred eEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 567 VLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
+++|..|.++|||++ + |+.||+|++|||+++.+ +.++..++.. .++.+.|+|.|++..
T Consensus 39 g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~------~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 39 GVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRN------CGNSVRMLVARDPAG 100 (111)
T ss_dssp SBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHH------HCSEEEEEEEESCTT
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCeEEEEEEeCCCC
Confidence 466999999999998 6 99999999999999995 4666666643 157899999998754
No 375
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=97.77 E-value=4.2e-05 Score=68.52 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=44.2
Q ss_pred ceEEEEEEcCCChHhh-h--ccCCCEEEEECCEEeCChhh--HHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAEN-M--LEQGDMMLAINKQPVTCFHD--IENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a--Lq~GDiILsVNGk~V~s~~d--l~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.++.. +..++..... ..+..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~--~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCE--RHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGG--SBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccc--cCCcEEEEEEEcC
Confidence 4567999999999998 6 99999999999999997744 4444432110 0024789998874
No 376
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=97.74 E-value=6.9e-05 Score=68.31 Aligned_cols=55 Identities=15% Similarity=0.252 Sum_probs=45.7
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEe--CChhhHHHHHHhcCCCCCCCCeEEEEEEe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPV--TCFHDIENACQALDKDGEDNGKLDITIFR 626 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V--~s~~dl~~~l~~~~~~~~~g~~v~l~V~R 626 (775)
.+++|..|.++|||++ + |++||+|++|||+++ .++.++..++... ++.+.++|.+
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~------~~~v~l~v~~ 108 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV------KGEVTIHYNK 108 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC------CSEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEEe
Confidence 3567999999999998 6 999999999999999 8899998887532 3457777764
No 377
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.74 E-value=8.5e-06 Score=71.90 Aligned_cols=57 Identities=26% Similarity=0.348 Sum_probs=44.6
Q ss_pred ceEEEEEEcCCChHhhhccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecC
Q 004068 566 QVLRVKGCLAGSKAENMLEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQG 628 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~aLq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~G 628 (775)
.+++|..|.++|||+.+|++||+|++|||++|.+. .++...+.. .++.+.|+|.|++
T Consensus 31 ~~~~V~~V~~~spA~agL~~GD~Il~ing~~v~~~~~~~~~~~~~~------~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSWERAVDILRE------AEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSSTTTSCTTCBEEEESSCBSTTCCHHHHHHHHHH------CSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchhhCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCeEEEEEEECC
Confidence 34568999999999745999999999999999874 444444432 2678999999976
No 378
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.74 E-value=7.7e-05 Score=66.58 Aligned_cols=58 Identities=16% Similarity=0.241 Sum_probs=46.0
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.+ +.++..++.. .++++.|+|.|...
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~------~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ------QRGEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHH------CCSEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCcEEEEEEecCC
Confidence 3567999999999998 4 99999999999999966 6666666642 24678999988653
No 379
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=97.73 E-value=6.2e-05 Score=70.49 Aligned_cols=59 Identities=19% Similarity=0.261 Sum_probs=47.1
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |+.||+|++|||++|.+ +.++...++. .++.+.|+|.|....
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~------~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ------GGNTLMVKVVMVTRH 126 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH------TTTEEEEEEECCCC-
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCEEEEEEEECCCC
Confidence 36779999999999996 99999999999999995 5555555533 267899999886543
No 380
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=97.69 E-value=5e-05 Score=67.76 Aligned_cols=53 Identities=17% Similarity=0.209 Sum_probs=44.4
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITI 624 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V 624 (775)
.+++|..|.++|||+++ |++||+|++|||++|. ++.++..++... ++++.|+|
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~------~~~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSS------GNLLTIET 103 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHT------TTEEEEEC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC------CCcEEEEE
Confidence 56779999999999996 9999999999999999 889998888543 23666654
No 381
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.68 E-value=2.1e-05 Score=70.32 Aligned_cols=58 Identities=7% Similarity=0.114 Sum_probs=45.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||+++ |++||+|++|||+++.++ .++...+.. .++.+.++|.|.+.
T Consensus 32 ~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~------~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKK------SGSRVMFLLVDKET 92 (106)
T ss_dssp CSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHH------HCSEEEEEECCTTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh------CCCeEEEEEEcCch
Confidence 45669999999999996 999999999999999865 555544432 25778999988764
No 382
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.66 E-value=2.3e-05 Score=71.85 Aligned_cols=58 Identities=26% Similarity=0.294 Sum_probs=46.6
Q ss_pred EEEEEEcCCChHhhh--ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 568 LRVKGCLAGSKAENM--LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 568 l~V~~V~~gSpA~~a--Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
++|..|.++|||+++ |+.||+|++|||+++.+ +.++..+++..... .++++.|+|.|.
T Consensus 45 i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~--~g~~v~l~v~r~ 106 (118)
T 1v6b_A 45 VVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQ--GGDWIDLVVAVC 106 (118)
T ss_dssp EEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHH--TCSEEEEEEECC
T ss_pred EEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhc--CCCeEEEEEEeC
Confidence 679999999999974 99999999999999998 56777776543210 157899999984
No 383
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.66 E-value=0.00011 Score=81.12 Aligned_cols=68 Identities=18% Similarity=0.332 Sum_probs=54.9
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe---EEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR---EIELQVGTD 638 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk---~~~l~V~l~ 638 (775)
.+++|..|.++|||+++ |++||+|++|||++|.++ .++..++.. . .++++.++|.|+|+ ..++++...
T Consensus 99 ~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~-~----~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQG-E----ADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp SCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCB-S----TTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred CcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc-C----CCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 45679999999999996 999999999999999997 566665531 1 37889999999998 666666543
No 384
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.65 E-value=0.00012 Score=67.61 Aligned_cols=56 Identities=14% Similarity=0.238 Sum_probs=46.6
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
.+++|..|.++|||++ + |+.||+|++|||+++. ++.++..+++.. ++++.++|.|.
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~------~~~v~l~v~r~ 104 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV------KGEVTIHYNKL 104 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS------CSEEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC------CCeEEEEEEEC
Confidence 4567999999999998 6 9999999999999998 577777777542 45689999873
No 385
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.63 E-value=6.3e-05 Score=68.58 Aligned_cols=58 Identities=16% Similarity=0.190 Sum_probs=46.2
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |+.||+|++|||+++.++. ++..++. . .++.+.|+|.|...
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~--~----~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIK--N----AGNPVVFIVQSLSS 111 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHH--T----SCSSEEEEECCBSC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEECCC
Confidence 5677999999999998 6 9999999999999998754 4444442 2 26789999988654
No 386
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.63 E-value=6.3e-05 Score=67.30 Aligned_cols=61 Identities=18% Similarity=0.212 Sum_probs=48.2
Q ss_pred EEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 568 LRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 568 l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
++|..|.+++||++ + |+.||+|++|||+++.. ++++..+++...... .++.+.++|.|.++
T Consensus 34 ~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~-~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 34 PRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK-DRDYIDFLVTEFNS 98 (103)
T ss_dssp CEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS-SCSEEEEEECCCCC
T ss_pred EEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC-CCCeEEEEEEEccc
Confidence 35899999999998 6 99999999999999976 888888776531100 25778999988654
No 387
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.62 E-value=2.3e-05 Score=70.79 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=47.3
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
..+++|..|.++|||++ + |+.||+|++|||+++. ++.++..++. . .++.+.|+|.|+..
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~--~----~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLR--S----VGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHS--S----CSSEEEECCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--c----CCCeEEEEEEECCC
Confidence 35677999999999998 6 9999999999999999 5666665552 2 26789999988653
No 388
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.59 E-value=0.00019 Score=70.28 Aligned_cols=57 Identities=14% Similarity=0.230 Sum_probs=46.5
Q ss_pred cceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 565 RQVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 565 ~q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
..+++|..|.+++||++ + |+.||+|++|||+.+. ++.++..+++. .+..+.|+|.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~------~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN------TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH------CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc------CCCEEEEEEEeC
Confidence 35778999999999998 6 9999999999999995 45566666643 267899999985
No 389
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=97.57 E-value=0.00056 Score=68.61 Aligned_cols=161 Identities=11% Similarity=0.052 Sum_probs=90.9
Q ss_pred eeEEEEEEEecCCceEEEEecceeccC-CceE----EEEEcCC-----CeEEeEEEEEEeCC--------CcEEEEEeCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAIS-ASDV----MLSFAAF-----PIEIPGEVVFLHPV--------HNFALIAYDP 377 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~-~~~I----~Vt~~d~-----~~~~~A~Vv~~dp~--------~DlAILk~d~ 377 (775)
..++|.+|+ ..+|||.+|++... ...+ .|.+... +..+..+-+..||. .|+||||++.
T Consensus 30 ~~CgGtLIs----~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~ 105 (215)
T 1p3c_A 30 SSCTGTLIA----PNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDT 105 (215)
T ss_dssp CEEEEEEEE----TTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESS
T ss_pred ceEEEEEEe----CCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECC
Confidence 579999999 67999999987543 2334 5655321 22456666666653 4999999986
Q ss_pred CCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCC----CCeeEEEEEeCCccccccCCCCcccccccceEEEEEeec
Q 004068 378 SSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSL----QATSRKSIVTNPCAALNISSADCPRYRAMNMEVIELDTD 453 (775)
Q Consensus 378 ~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~----~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~Da~ 453 (775)
. +. ..+.++.|.... ...|+.++++|++... ........+.-+ ....+. .. .-+..
T Consensus 106 ~-~~----~~v~pi~l~~~~-~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~------~~~~c~-------~~-~~~~~ 165 (215)
T 1p3c_A 106 N-IG----NTVGYRSIRQVT-NLTGTTIKISGYPGDKMRSTGKVSQWEMSGSV------TREDTN-------LA-YYTID 165 (215)
T ss_dssp C-HH----HHHCCCCBCCCS-CCTTCEEEEEECCHHHHHHHSSCCCEEEEEEC------CEECSS-------EE-EECCC
T ss_pred C-Cc----ccceeeecCCCc-ccCCCeEEEecCCCCCcccccceechhccCcc------Ccccch-------he-eeccc
Confidence 3 32 245567776554 5789999999997311 011111111100 000000 00 11223
Q ss_pred cCCC-CCceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHH
Q 004068 454 FGST-FSGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKII 509 (775)
Q Consensus 454 i~~~-~GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~ 509 (775)
.-.+ +||||+..+|.++||.+...+- ...-..| .-+...+++|++..
T Consensus 166 ~C~GDSGgPl~~~~g~lvGi~S~g~~c------~~~p~v~---t~v~~~~~WI~~~~ 213 (215)
T 1p3c_A 166 TFSGNSGSAMLDQNQQIVGVHNAGYSN------GTINGGP---KATAAFVEFINYAK 213 (215)
T ss_dssp CCTTCTTCEEECTTSCEEEECCEEEGG------GTEEEEE---BCCHHHHHHHHHHH
T ss_pred cCCCCCCCeeEccCCeEEEEEecccCC------CccCcee---EechHHHHHHHHHh
Confidence 3344 4999999899999997532211 0011112 34556677776654
No 390
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.56 E-value=5.2e-05 Score=70.75 Aligned_cols=59 Identities=22% Similarity=0.350 Sum_probs=47.0
Q ss_pred ceEEEEEEcCCChHhhh--ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAENM--LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a--Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
..++|..|.+++||+++ |+.||+|++|||+.+.+ +.++..+++... +..+.++|.|++.
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-----~~~v~l~v~r~~~ 119 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP-----DGPVTIVIRRKSL 119 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSC-----SSEEEEEEEEESS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-----CceEEEEEEeCCC
Confidence 45679999999999973 99999999999999987 566666664322 4569999998754
No 391
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.50 E-value=0.00013 Score=80.67 Aligned_cols=61 Identities=23% Similarity=0.211 Sum_probs=52.0
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |++||+|++|||+++.+ ++++..++.... .|+.+.|+|.|+++.
T Consensus 31 ~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~----~g~~v~l~v~r~~~~ 94 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLP----KGEEVTILAQKKKDV 94 (391)
T ss_dssp TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSC----TTSEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhc----CCCeEEEEEeeCCcc
Confidence 56779999999999985 99999999999999987 888888876433 378999999998754
No 392
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.49 E-value=0.00026 Score=64.51 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=45.7
Q ss_pred EEEEEEcCCChHhhh-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeEEEE
Q 004068 568 LRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGREIEL 633 (775)
Q Consensus 568 l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~~~l 633 (775)
.+|.+|.+ +++.+ |++||+|++|||++|.++ .++..+++..+ .+..+.|+|.|+|....+
T Consensus 36 ~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~----~G~~v~L~V~R~g~~~p~ 98 (113)
T 3soe_A 36 QKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFP----VGADVPLLILRGGPPSPT 98 (113)
T ss_dssp EEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSC----TTCEEEEEEEESSCC---
T ss_pred cEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC----CCCEEEEEEEECCccCcc
Confidence 34778876 46655 999999999999999965 67888886554 378899999999865443
No 393
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=97.49 E-value=0.0007 Score=68.39 Aligned_cols=90 Identities=18% Similarity=0.195 Sum_probs=64.2
Q ss_pred ceeEEEEEEEecCCceEEEEecceecc-CCceEEEEEcC-----CCeEEeEEEEEEeCC-----CcEEEEEeCCC-CCCc
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAI-SASDVMLSFAA-----FPIEIPGEVVFLHPV-----HNFALIAYDPS-SLGV 382 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~-~~~~I~Vt~~d-----~~~~~~A~Vv~~dp~-----~DlAILk~d~~-~l~~ 382 (775)
...++|.+|+ .-+|||.+|.+.. ....+.|.+.. .+..+..+-+..||. .|+||||++.. .+.
T Consensus 23 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~- 97 (224)
T 1pq7_A 23 GPWCGGSLLN----ANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSG- 97 (224)
T ss_dssp EEEEEEEEEE----TTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCB-
T ss_pred CeEEEEEEec----CCEEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCC-
Confidence 3679999999 6799999998754 23457777632 246777788888985 59999999753 322
Q ss_pred ccccceeeeeeCC-CCCCCCCCEEEEEEeCC
Q 004068 383 AGASVVRAAELLP-EPALRRGDSVYLVGLSR 412 (775)
Q Consensus 383 ~~~~~v~~~~lg~-s~~l~~Gd~V~aiG~p~ 412 (775)
..+.++.|.. ......|+.+++.|+..
T Consensus 98 ---~~v~picL~~~~~~~~~g~~~~v~GwG~ 125 (224)
T 1pq7_A 98 ---GNIGYARLAASGSDPVAGSSATVAGWGA 125 (224)
T ss_dssp ---TTBCCCCBCCTTCCCCTTCEEEEEESCC
T ss_pred ---CcccceecCCcccCCCCCCEEEEEecCC
Confidence 3456677752 22357899999999753
No 394
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.49 E-value=4.9e-05 Score=68.65 Aligned_cols=58 Identities=21% Similarity=0.188 Sum_probs=45.7
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ + |++||+|++|||+++.++. ++..++. . .++.+.++|.|+++
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~--~----~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK--R----AGQSVTIVAQYRPE 100 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH--S----CCSEEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--h----CCCcEEEEEEECcc
Confidence 4556899999999998 5 9999999999999999984 4443332 2 26789999998754
No 395
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.48 E-value=9.7e-05 Score=67.54 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=46.2
Q ss_pred ceEEEEEEcCCChHhh---hccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCe
Q 004068 566 QVLRVKGCLAGSKAEN---MLEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGR 629 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~---aLq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk 629 (775)
.+++|..|.++|||++ +|+.||+|++|||++|.++ .++..++...... .+..+.|+|.|+..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCER--HSGELMLLVRPNAV 107 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHC--CSSCEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccc--CCCEEEEEEEcccc
Confidence 3567999999999997 4999999999999999874 5555555332100 02479999999864
No 396
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.42 E-value=0.00019 Score=81.02 Aligned_cols=61 Identities=23% Similarity=0.211 Sum_probs=52.7
Q ss_pred ceEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCC--hhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTC--FHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s--~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||+++ |+.||+|++|||++|.+ ++++..++.... .|+.+.|+|.|+|+.
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~----~g~~v~L~V~r~g~~ 86 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLP----KGEEVTILAQKKKDV 86 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSC----TTSEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcC----CCCEEEEEEEECCcc
Confidence 56779999999999985 99999999999999988 888888886544 378899999998764
No 397
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.50 E-value=2.4e-05 Score=71.19 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=35.0
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCC--hhhHHHHH
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTC--FHDIENAC 607 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s--~~dl~~~l 607 (775)
.+++|..|.++|||++ + |++||+|++|||++|.+ +.++..++
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l 98 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTIL 98 (112)
Confidence 3566999999999998 6 99999999999999954 66655555
No 398
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=97.37 E-value=0.0028 Score=64.44 Aligned_cols=85 Identities=18% Similarity=0.269 Sum_probs=61.4
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeC------------------CCc
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHP------------------VHN 369 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp------------------~~D 369 (775)
..++|.+|+ .-+|||.+|.+. .++.|.+.. ....+..+-+..|| .+|
T Consensus 24 ~~CgGsLIs----~~~VLTAAHC~~---~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~D 96 (237)
T 1gvz_A 24 FQCGGVLVH----PQWVLTAAHCMS---DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHD 96 (237)
T ss_dssp EEEEEEEEE----TTEEEECGGGCC---SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTC
T ss_pred eEEEeEEee----CCEEEEcHHhCC---CCCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCc
Confidence 579999999 679999999874 344555432 13566677778887 679
Q ss_pred EEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 370 FALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 370 lAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
+|||+++.. .+. ..+.++.|.... ...|+.+++.|+..
T Consensus 97 IALl~L~~~~~~~----~~v~picLp~~~-~~~~~~~~v~GwG~ 135 (237)
T 1gvz_A 97 LMLLRLAQPARIT----DAVKILDLPTQE-PKLGSTCYTSGWGL 135 (237)
T ss_dssp CEEEEESSCCCCB----TTBCCCCCCSSC-CCTTCEEEEEEEEC
T ss_pred eEEEEeCCCcccC----CcEeeeECCCCC-CCCCCEEEEECCCc
Confidence 999999743 332 356667776554 67899999999854
No 399
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.36 E-value=0.00041 Score=59.57 Aligned_cols=51 Identities=22% Similarity=0.227 Sum_probs=40.5
Q ss_pred EEEEcCCChHhhh-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEe
Q 004068 570 VKGCLAGSKAENM-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFR 626 (775)
Q Consensus 570 V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R 626 (775)
|..+.++|||+++ |+.||+|++|||+.+..+. ++..+++ . .+.+++|+|..
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr--~----~g~~V~L~v~p 80 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS--T----SGTVVTITIMP 80 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH--H----SCSEEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh--c----CCCEEEEEEEe
Confidence 7899999999995 9999999999999997654 4444553 2 36788888764
No 400
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.33 E-value=0.00029 Score=87.06 Aligned_cols=67 Identities=27% Similarity=0.348 Sum_probs=59.9
Q ss_pred CceEEEEEcCC--------CHHhHcC--CCCCCEEEEECCeeCCCHHHHHHHHHhcCCCCEEEEEEEEeCC-eEEEEEEE
Q 004068 674 HGVYVARWCHG--------SPVHRYG--LYALQWIVEINGKRTPDLEAFVNVTKEIEHGEFVRVRTVHLNG-KPRVLTLK 742 (775)
Q Consensus 674 ~gV~Vs~V~~G--------SPA~~aG--L~~GD~I~~VNG~pV~dl~~f~~~v~~i~~g~~V~L~~V~Rdg-~~~~ltlk 742 (775)
.+++|..+.+| |||+++| |+ ||+|++|||+++.++.++.+.++. ++|+.|+|+ +.|+| +++.++|+
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~-~~g~~v~l~-v~r~~~~~~~~~~~ 824 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSE-KAGTSARIR-LSGKGGDKRDLMID 824 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHT-TTTSEEEEE-EECSSSCEEEEEEE
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcC-CCCCEEEEE-EECCCCceEEEEEE
Confidence 37889999998 9999999 99 999999999999999999999988 679999999 67877 67788888
Q ss_pred e
Q 004068 743 Q 743 (775)
Q Consensus 743 ~ 743 (775)
+
T Consensus 825 ~ 825 (1045)
T 1k32_A 825 I 825 (1045)
T ss_dssp C
T ss_pred E
Confidence 5
No 401
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.29 E-value=9.8e-05 Score=75.10 Aligned_cols=64 Identities=19% Similarity=0.131 Sum_probs=53.1
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeC--ChhhHHHHHHhcCCCCCCCCeE-EEEEEecCeEE--EEEEE
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVT--CFHDIENACQALDKDGEDNGKL-DITIFRQGREI--ELQVG 636 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~--s~~dl~~~l~~~~~~~~~g~~v-~l~V~R~Gk~~--~l~V~ 636 (775)
+++|..|.++|||+++ |+.||+|++|||+.|. ++.++..++... ++.+ .++|.|+|+.. ++.+.
T Consensus 34 gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~------g~~v~~l~V~R~g~~~~~~v~v~ 103 (216)
T 2krg_A 34 GQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG------GDETKLLVVDRETDEFFKKCRVI 103 (216)
T ss_dssp SCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH------CSEEEEEECCHHHHHHHHHHTCC
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc------CCeEEEEEEEECCEEEEEEEEEE
Confidence 5669999999999995 9999999999999999 999998887532 4678 89999998765 44443
No 402
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.24 E-value=0.00018 Score=79.83 Aligned_cols=57 Identities=18% Similarity=0.234 Sum_probs=46.5
Q ss_pred eEEEEEEcCCChHhhh-ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 567 VLRVKGCLAGSKAENM-LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 567 ~l~V~~V~~gSpA~~a-Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.++|..|.++|||+++ |+.||+|++|||++|.++. +..++ .. .+.++.++|.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~~~l---~~---~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ESELL---QG---STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GGGGT---SC---SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HHHHh---hC---CCCEEEEEEEeCCcc
Confidence 4669999999999996 9999999999999999985 44333 21 378899999998764
No 403
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.24 E-value=0.00081 Score=59.29 Aligned_cols=56 Identities=14% Similarity=0.274 Sum_probs=45.8
Q ss_pred EEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCChh--hHHHHHHhcCCCCCCCCeEEEEEEec
Q 004068 568 LRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCFH--DIENACQALDKDGEDNGKLDITIFRQ 627 (775)
Q Consensus 568 l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~~--dl~~~l~~~~~~~~~g~~v~l~V~R~ 627 (775)
++|.++.++++|++ + |+.||.|++|||+.+..+. ++..+|+..+ .+.+++|++.+-
T Consensus 30 ~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~----~g~~~~L~lv~p 89 (95)
T 3gge_A 30 AFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELK----KEELFTMKLIEP 89 (95)
T ss_dssp CEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSC----TTCEEEEEEEEE
T ss_pred EEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCC----CCCEEEEEEECc
Confidence 45999999999998 5 9999999999999998764 6667776655 367788888763
No 404
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.23 E-value=0.00022 Score=74.61 Aligned_cols=59 Identities=14% Similarity=0.186 Sum_probs=47.5
Q ss_pred ceEEEEEEcCCChHhh-h-ccCCCEEEEECCEEeCCh--hhHHHHHHhcCCCCCCCCeEEEEEEecCeE
Q 004068 566 QVLRVKGCLAGSKAEN-M-LEQGDMMLAINKQPVTCF--HDIENACQALDKDGEDNGKLDITIFRQGRE 630 (775)
Q Consensus 566 q~l~V~~V~~gSpA~~-a-Lq~GDiILsVNGk~V~s~--~dl~~~l~~~~~~~~~g~~v~l~V~R~Gk~ 630 (775)
.+++|..|.++|||++ + |+.||+|++|||++|.++ .++..+++. .++.+.|+|.|.++.
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~------~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK------TGKEVVLEVKYMKEV 165 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHH------CCSCCCEEEECCSSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhc------CCCeEEEEEEeCccc
Confidence 4677999999999999 5 999999999999999986 444555532 256799999997653
No 405
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=97.23 E-value=0.0097 Score=59.76 Aligned_cols=101 Identities=18% Similarity=0.274 Sum_probs=64.9
Q ss_pred CcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------CeEEeEEEEEE
Q 004068 293 PTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------PIEIPGEVVFL 364 (775)
Q Consensus 293 ~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~~~~~A~Vv~~ 364 (775)
|-+|.+..... + .....++|.+|+ .-+|||.+|.+. ..+.|.+... ...+..+-+..
T Consensus 13 Pw~v~l~~~~~-----~---~~~~~CgGtLI~----~~~VLTAAhC~~---~~~~v~~G~~~~~~~~~~~~~~~v~~~~~ 77 (226)
T 4ag1_A 13 PYMAYLEIVTS-----N---GPSKFCGGFLIR----RNFVLTAAHCAG---RSITVTLGAHNITEEEDTWQKLEVIKQFR 77 (226)
T ss_dssp TTEEEEEEECS-----S---SSCEEEEEEEEE----TTEEEECGGGCC---SEEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred CcEEEEEEEcC-----C---CcccEEEEEEEe----CCEEEECcccCC---CCeEEEeCCcccCCCCCcceEEEEEEEEe
Confidence 56676654322 1 224679999999 669999999874 3566665421 24566666788
Q ss_pred eCC-------CcEEEEEeCCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 365 HPV-------HNFALIAYDPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 365 dp~-------~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
||. .|+||||++.. .+. ..+.++.|.... .+..|+.+.+.|+..
T Consensus 78 hp~y~~~~~~~DIALl~L~~~~~~~----~~v~pi~l~~~~~~~~~~~~~~v~GwG~ 130 (226)
T 4ag1_A 78 HPKYNTSTLHHDIMLLKLKEKASLT----LAVGTLPFPSQFNFVPPGRMCRVAGWGR 130 (226)
T ss_dssp CTTCCTTTCTTCCEEEEESSCCCCC----SSSCCCCCC-----CCTTCEEEEEESSB
T ss_pred CCCCCCCCCcCcEEEEEECCCCccC----CceeccccCCcccCCCCCCEEEEEECCC
Confidence 886 59999999643 332 244455554332 257899999999853
No 406
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=97.20 E-value=0.0098 Score=59.58 Aligned_cols=100 Identities=15% Similarity=0.273 Sum_probs=67.0
Q ss_pred CcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEE
Q 004068 293 PTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFL 364 (775)
Q Consensus 293 ~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~ 364 (775)
|-+|.+..... + .....++|.+|+ .-+|||.+|.+. ..+.|.+.. ....+..+-+..
T Consensus 13 Pw~v~l~~~~~-----~---~~~~~CgGtLI~----~~~VLTAAhC~~---~~~~v~~g~~~~~~~~~~~~~~~v~~~~~ 77 (224)
T 3rp2_A 13 PYMAHLDIVTE-----K---GLRVICGGFLIS----RQFVLTAAHCKG---REITVILGAHDVRKRESTQQKIKVEKQII 77 (224)
T ss_dssp TTEEEEEEECT-----T---SCEEEEEEEESS----SSEEEECGGGCC---SEEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred CcEEEEEEecC-----C---CcEEEEEeEEee----CCEEEEchhcCC---CCcEEEEeccccCcCCCCcEEEEEEEEEE
Confidence 66777754322 1 124679999999 679999999874 355666532 124667777788
Q ss_pred eCC-------CcEEEEEeCCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 365 HPV-------HNFALIAYDPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 365 dp~-------~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
||. .|+||||++.. .+. ..+.++.|.... .+..|+.+++.|+.
T Consensus 78 hp~y~~~~~~~DIALl~L~~~~~~~----~~v~pi~l~~~~~~~~~~~~~~v~GwG 129 (224)
T 3rp2_A 78 HESYNSVPNLHDIMLLKLEKKVELT----PAVNVVPLPSPSDFIHPGAMCWAAGWG 129 (224)
T ss_dssp CTTCCSSSCCSCCEEEEESSCCCCB----TTBCCCCCCCTTCCCCTTCEEEEEESS
T ss_pred CCCccCCCCCccEEEEEcCCCcccC----CcccceecCCcccCCCCCCEEEEEeCC
Confidence 886 69999999643 332 245556664332 35789999999974
No 407
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=97.15 E-value=0.0041 Score=62.68 Aligned_cols=85 Identities=20% Similarity=0.241 Sum_probs=60.4
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-C
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS-S 379 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~-~ 379 (775)
..++|.+|+ .-+|||.+|.+. ..+.|.+.. ....+..+-+..||. .|+||||++.. .
T Consensus 23 ~~CgGsLIs----~~~VLTAAHC~~---~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~ 95 (222)
T 1hj8_A 23 HFCGGSLVN----ENWVVSAAHCYK---SRVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPAT 95 (222)
T ss_dssp EEEEEEEEE----TTEEEECGGGCC---SSCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCC
T ss_pred cEEEeEEec----CCEEEECHHhcC---CCeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCccc
Confidence 579999999 679999999875 234455431 134566666778874 59999999743 3
Q ss_pred CCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 380 LGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 380 l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
+. ..+.++.|.... +..|+.+++.|+..
T Consensus 96 ~~----~~v~picL~~~~-~~~~~~~~v~GwG~ 123 (222)
T 1hj8_A 96 LN----TYVQPVALPTSC-APAGTMCTVSGWGN 123 (222)
T ss_dssp CS----SSCCCCBCCSSC-CCTTCEEEEEESSC
T ss_pred CC----CceeccCCCCCC-CCCCCEEEEEECCC
Confidence 32 346667776554 78999999999864
No 408
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=97.11 E-value=0.034 Score=55.87 Aligned_cols=87 Identities=16% Similarity=0.230 Sum_probs=61.1
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. .|+||||++..
T Consensus 26 ~~~CgGsLI~----~~~VLTAAHC~~~---~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v 98 (224)
T 1cgh_A 26 QSRCGGFLVR----EDFVLTAAHCWGS---NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRV 98 (224)
T ss_dssp SCEEEEEEEE----TTEEEECGGGCCS---SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCC
T ss_pred CeEEEEEEee----CCEEEEhHHhCCC---CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCC
Confidence 3679999999 6799999998753 45566532 135666777778876 49999999643
Q ss_pred CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 99 ~~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 129 (224)
T 1cgh_A 99 RRN----RNVNPVALPRAQEGLRPGTLCTVAGWGR 129 (224)
T ss_dssp CCB----TTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred cCC----CceEeeECCCCCCCCCCCCEEEEEECCc
Confidence 332 345666775432 357899999999853
No 409
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=97.08 E-value=0.0045 Score=62.56 Aligned_cols=88 Identities=17% Similarity=0.226 Sum_probs=61.5
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------CeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------PIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+. +...+.|.+... ...+..+-+..||. .|+||||++..
T Consensus 23 ~~~CgGtLI~----~~~VLTAAHC~~-~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~ 97 (226)
T 1azz_A 23 MYFCGGSLIS----PEWILTAAHCMD-GAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPV 97 (226)
T ss_dssp TEEEEEEEEE----TTEEEECHHHHT-TCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCC
T ss_pred cEEEEEEEec----CCEEEEhHHhcC-CCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCcc
Confidence 3679999999 679999988775 355677776421 23455555667764 59999999643
Q ss_pred CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... ...|+.+++.|+..
T Consensus 98 ~~~----~~v~picL~~~~-~~~~~~~~v~GwG~ 126 (226)
T 1azz_A 98 TLT----AAIATVGLPSTD-VGVGTVVTPTGWGL 126 (226)
T ss_dssp CCC----SSSCCCBCCSSC-CCTTCEEEEEESSC
T ss_pred ccC----CCcccccCCCCC-CCCCCEEEEEeCCc
Confidence 332 346667776544 47899999999753
No 410
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=97.06 E-value=0.011 Score=59.50 Aligned_cols=87 Identities=15% Similarity=0.216 Sum_probs=60.8
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. .|+||||++..
T Consensus 26 ~~~CgGtLI~----~~~VLTAAHC~~~---~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~ 98 (227)
T 1iau_A 26 LKRCGGFLIR----DDFVLTAAHCWGS---SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKA 98 (227)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCCS---EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCC
T ss_pred ceEEEEEEEc----CCEEEECHHhCCC---ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcc
Confidence 3679999999 6799999998753 45666532 134566677778875 59999999643
Q ss_pred CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 99 ~~~----~~v~picLp~~~~~~~~g~~~~v~GwG~ 129 (227)
T 1iau_A 99 KRT----RAVQPLRLPSNKAQVKPGQTCSVAGWGQ 129 (227)
T ss_dssp CCB----TTBCCCCCCCTTCCCCTTCEEEEEESSC
T ss_pred cCC----CceecccCCCCCCCCCCCCEEEEEEccc
Confidence 332 345566665433 357899999999853
No 411
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=97.04 E-value=0.0086 Score=60.31 Aligned_cols=90 Identities=17% Similarity=0.182 Sum_probs=61.2
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC-CceEEEEEcCC--------CeEEeEEEEEEeCC-------CcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS-ASDVMLSFAAF--------PIEIPGEVVFLHPV-------HNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~-~~~I~Vt~~d~--------~~~~~A~Vv~~dp~-------~DlAILk~d~~ 378 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+... ...+..+-+..||. .|+||||++..
T Consensus 23 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~ 98 (228)
T 2xw9_A 23 AHLCGGVLVA----EQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEK 98 (228)
T ss_dssp EEEEEEEEEE----TTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSC
T ss_pred CeEEEEEEEe----CCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCC
Confidence 3679999999 67999999987532 34677776421 24566666778875 59999999743
Q ss_pred -CCCcccccceeeeeeCCC-CCCCCCCEEEEEEeCC
Q 004068 379 -SLGVAGASVVRAAELLPE-PALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|... ..+..|+.+++.|+..
T Consensus 99 ~~~~----~~v~pi~l~~~~~~~~~g~~~~v~GwG~ 130 (228)
T 2xw9_A 99 ATLG----PAVRPLPWQRVDRDVAPGTLCDVAGWGI 130 (228)
T ss_dssp CCCB----TTBCCCCBCCSCCCCCTTC-CEEEESSC
T ss_pred cccC----CCeeecccCCcccCCCCCCEEEEEEecc
Confidence 332 24555666542 2367899999999753
No 412
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=97.03 E-value=0.024 Score=57.09 Aligned_cols=86 Identities=19% Similarity=0.230 Sum_probs=60.9
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCCC----------cEEEEEeC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPVH----------NFALIAYD 376 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~~----------DlAILk~d 376 (775)
...+.|.+|+ .-+|||.+|.+. ..+.|.+.. ....+..+-+..||.. |+||||++
T Consensus 23 ~~~CgGsLI~----~~~VLTAAHC~~---~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~ 95 (225)
T 1npm_A 23 RLICGGVLVG----DRWVLTAAHCKK---QKYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQ 95 (225)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCC---SSCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEES
T ss_pred ceEEEEEEEC----CCEEEEhHHcCC---CCceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeC
Confidence 3679999999 679999999874 234555531 1345666666777643 99999997
Q ss_pred CC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 377 PS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 377 ~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.. .+. ..+.++.|.+.. ...|+.+++.|+..
T Consensus 96 ~~~~~~----~~v~pi~L~~~~-~~~~~~~~v~GwG~ 127 (225)
T 1npm_A 96 NSANLG----DKVKPVQLANLC-PKVGQKCIISGWGT 127 (225)
T ss_dssp SCCCCS----SSSCCCEECSSC-CCTTCEEEEEESSC
T ss_pred CcccCC----CceeceECCCCC-CCCCCEEEEEeCCc
Confidence 43 332 356667886554 68999999999853
No 413
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=97.03 E-value=0.015 Score=58.76 Aligned_cols=85 Identities=15% Similarity=0.266 Sum_probs=59.7
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC------------------Cc
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV------------------HN 369 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~------------------~D 369 (775)
..++|.+|+ .-+|||.+|.+. ..+.|.+.. ....+..+-+..||. .|
T Consensus 22 ~~CgGsLIs----~~~VLTAAHC~~---~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~D 94 (235)
T 1ton_A 22 YLCGGVLID----PSWVITAAHCYS---NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSND 94 (235)
T ss_dssp SEEEEEEEE----TTEEEECGGGCC---SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCCSTTC
T ss_pred CeEEEEEec----CCEEEEcHHhCC---CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCCCcCC
Confidence 579999999 679999999873 334455432 134555666677764 49
Q ss_pred EEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 370 FALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 370 lAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
+|||+++.. .+. ..+.++.|.... ...|+.+++.|+..
T Consensus 95 IALl~L~~~~~~~----~~v~picL~~~~-~~~~~~~~v~GwG~ 133 (235)
T 1ton_A 95 LMLLHLSEPADIT----GGVKVIDLPTKE-PKVGSTCLASGWGS 133 (235)
T ss_dssp CEEEEESSCCCCC----SSCCCCCCCCSC-CCTTCEEEEEESSC
T ss_pred EEEEEcCCccccC----CcceeeeCCCCC-CCCCCEEEEEecCC
Confidence 999999643 332 356667776554 78899999999853
No 414
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=97.03 E-value=0.067 Score=54.18 Aligned_cols=89 Identities=15% Similarity=0.198 Sum_probs=63.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceecc--CCceEEEEEcCC--------CeEEeEEEEEEeCC-------CcEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAI--SASDVMLSFAAF--------PIEIPGEVVFLHPV-------HNFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~--~~~~I~Vt~~d~--------~~~~~A~Vv~~dp~-------~DlAILk~d~ 377 (775)
...+.|.+|+ .-+|||.+|.+.. ....+.|.+... ...+..+-+..||. .|+||||++.
T Consensus 25 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~ 100 (240)
T 1mza_A 25 HHVCGGVLID----PQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQT 100 (240)
T ss_dssp EEEEEEEEEE----TTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESS
T ss_pred ceEEEEEEec----CCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCC
Confidence 4679999999 6799999998753 245567766421 24566666777765 6999999975
Q ss_pred C-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeC
Q 004068 378 S-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLS 411 (775)
Q Consensus 378 ~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p 411 (775)
. .+. ..+.++.|.....+..|+.+++.|+.
T Consensus 101 ~~~~~----~~v~pi~l~~~~~~~~~~~~~v~GwG 131 (240)
T 1mza_A 101 AAKLN----KHVKMLHIRSKTSLRSGTKCKVTGWG 131 (240)
T ss_dssp CCCCB----TTBCCCCBCSSCCCCTTCEEEEEECC
T ss_pred CcccC----CceeeeecCCcccCCCCCEEEEEeCC
Confidence 3 332 35666777653447899999999975
No 415
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=97.02 E-value=0.017 Score=57.86 Aligned_cols=85 Identities=20% Similarity=0.254 Sum_probs=60.6
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-C
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS-S 379 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~-~ 379 (775)
..++|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. .|+|||+++.. .
T Consensus 23 ~~C~GtLI~----~~~VLTAAhC~~~---~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~ 95 (223)
T 4i8h_A 23 HFCGGSLIN----SQWVVSAAHCYKS---GIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAAS 95 (223)
T ss_dssp EEEEEEECS----SSEEEECGGGCCS---SCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCC
T ss_pred cEEEEEEEc----CCEEEecHHhCCC---CcEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCc
Confidence 569999999 6799999998753 33444421 134566677788884 69999999743 3
Q ss_pred CCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 380 LGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 380 l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
+. ..+.++.|.... ...|+.+++.|+..
T Consensus 96 ~~----~~v~pi~l~~~~-~~~~~~~~v~GwG~ 123 (223)
T 4i8h_A 96 LN----SRVASISLPTSC-ASAGTQCLISGWGN 123 (223)
T ss_dssp CB----TTBCCCBCCSSC-CCTTCEEEEEESSC
T ss_pred CC----CceeceECCCCC-CCCCCEEEEEeccc
Confidence 32 356667776554 78999999999853
No 416
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=97.00 E-value=0.023 Score=57.15 Aligned_cols=85 Identities=21% Similarity=0.270 Sum_probs=60.6
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-C
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS-S 379 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~-~ 379 (775)
..++|.+|+ .-+|||.+|.+. ..+.|.+.. ....+..+-+..||. .|+||||++.. .
T Consensus 23 ~~CgGsLIs----~~~VLTAAHC~~---~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~ 95 (223)
T 3mfj_A 23 HFCGGSLIN----SQWVVSAAHCYK---SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAAS 95 (223)
T ss_dssp EEEEEEEEE----TTEEEECGGGCC---SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCC
T ss_pred eEEEEEEec----CCEEEEhHHhcC---CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcc
Confidence 679999999 679999999873 344555531 134566666777875 59999999753 3
Q ss_pred CCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 380 LGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 380 l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
+. ..+.++.|.... ...|+.+++.|+..
T Consensus 96 ~~----~~v~picL~~~~-~~~~~~~~v~GwG~ 123 (223)
T 3mfj_A 96 LN----SRVASISLPTSC-ASAGTQCLISGWGN 123 (223)
T ss_dssp CB----TTBCCCBCCSSC-CCTTCEEEEEESSC
T ss_pred cC----CcEeeeECCCCC-CCCCCEEEEEeeec
Confidence 32 356667776554 67899999999853
No 417
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=96.98 E-value=0.0051 Score=61.97 Aligned_cols=90 Identities=11% Similarity=0.048 Sum_probs=64.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC-----CCeEEeEEEEEEeCC-------CcEEEEEeCCC-C
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA-----FPIEIPGEVVFLHPV-------HNFALIAYDPS-S 379 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d-----~~~~~~A~Vv~~dp~-------~DlAILk~d~~-~ 379 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. .+..+..+-+..||. .|+|||+++.. .
T Consensus 23 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~ 98 (222)
T 1eq9_A 23 SHRCGASILD----NNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIK 98 (222)
T ss_dssp EEEEEEEECS----SSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCC
T ss_pred CeEEEEEEee----CCEEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccc
Confidence 3679999999 77999999987542 3567777642 145667777778875 59999999753 3
Q ss_pred CCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 380 LGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 380 l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
+. ..+.++.|........|+.+++.|+..
T Consensus 99 ~~----~~v~picL~~~~~~~~~~~~~v~GwG~ 127 (222)
T 1eq9_A 99 FN----DLVQPIKLSTNDEDLESNPCTLTGWGS 127 (222)
T ss_dssp CB----TTBCCCEECSCCTTCTTSEEEEEECCC
T ss_pred cC----CceEccCCCCCCcCCCCCEEEEEcccc
Confidence 32 346677886655346899999999753
No 418
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=96.97 E-value=0.04 Score=55.03 Aligned_cols=90 Identities=19% Similarity=0.282 Sum_probs=59.9
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCC-ceEEEEEcCC--------CeEEeEEEEEEe------CCCcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISA-SDVMLSFAAF--------PIEIPGEVVFLH------PVHNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~-~~I~Vt~~d~--------~~~~~A~Vv~~d------p~~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+.... ..+.|.+... ...+..+-+..| ...|+|||+++..
T Consensus 26 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~ 101 (221)
T 1fuj_A 26 SHFCGGTLIH----PSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPA 101 (221)
T ss_dssp CCCEEEEEEE----TTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCC
T ss_pred CEEEEEEEec----CCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCcc
Confidence 3579999999 679999999876432 3566766421 244555555554 2369999999743
Q ss_pred CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 102 ~~~----~~v~picL~~~~~~~~~~~~~~~~GwG~ 132 (221)
T 1fuj_A 102 NLS----ASVATVQLPQQDQPVPHGTQCLAMGWGR 132 (221)
T ss_dssp CCC----SSCCCCBCCCTTCCCCTTCEEEEEESSB
T ss_pred ccC----CcceeeECCCCcCCCCCCCEEEEEEeCC
Confidence 332 345566665433 257899999999853
No 419
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=96.96 E-value=0.02 Score=57.56 Aligned_cols=170 Identities=14% Similarity=0.133 Sum_probs=92.7
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC-CceEEEEEcCCC---------eEEeEEEEEEe------CCCcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS-ASDVMLSFAAFP---------IEIPGEVVFLH------PVHNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~-~~~I~Vt~~d~~---------~~~~A~Vv~~d------p~~DlAILk~d~~ 378 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.... ..+..+-+..| ...|+||||++..
T Consensus 23 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~ 98 (225)
T 1a7s_A 23 RHFCGGALIH----ARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDRE 98 (225)
T ss_dssp EEEEEEEEEE----TTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSC
T ss_pred CcEEEEEEee----CCEEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCc
Confidence 3679999999 67999999987542 345677764211 45555555555 3369999999743
Q ss_pred -CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCCCCC-----CeeEEEEEeCCccccccCCCCcccccccceEEEEE-
Q 004068 379 -SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSRSLQ-----ATSRKSIVTNPCAALNISSADCPRYRAMNMEVIEL- 450 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~g~~-----~~~~~g~VS~~~~~~~~~~~~~pryra~n~e~I~~- 450 (775)
.+. ..+.++.|.... .+..|+.+++.|+..... .......+.-+ ....+.+ ++-+...
T Consensus 99 ~~~~----~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~------~~~~C~~----~~~Ca~~~ 164 (225)
T 1a7s_A 99 ANLT----SSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVT------PEDQCRP----NNVCTGVL 164 (225)
T ss_dssp CCCB----TTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEEC------CGGGSCT----TEEEEECS
T ss_pred ccCC----CceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEEC------CHHHhcc----CceEEecc
Confidence 332 235556664432 257899999999864321 11222222200 0000100 1111110
Q ss_pred e--eccCCC-CCceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcC
Q 004068 451 D--TDFGST-FSGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISG 511 (775)
Q Consensus 451 D--a~i~~~-~GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g 511 (775)
+ ...-.+ +||||+-. |.++||.+..... ....-.-| ..+...+++|++..+.
T Consensus 165 ~~~~~~C~GDSGgPl~~~-g~l~Gi~S~g~~~-----C~~~p~vy---t~V~~~~~WI~~~~~~ 219 (225)
T 1a7s_A 165 TRRGGICNGDGGTPLVCE-GLAHGVASFSLGP-----CGRGPDFF---TRVALFRDWIDGVLNN 219 (225)
T ss_dssp SSSCBCCTTCTTCEEEET-TEEEEEEEEECSS-----TTSSCEEE---EEGGGGHHHHHHHHHS
T ss_pred CCCCCcccCCCcchheeC-CEEEEEEEEccCC-----cCCCCcEE---EEhHHhHHHHHHHhcC
Confidence 1 112223 39999876 7999997632121 11111223 6677788888887655
No 420
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=96.96 E-value=0.033 Score=56.55 Aligned_cols=90 Identities=12% Similarity=0.123 Sum_probs=60.9
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC-CceEEEEEcCC----------CeEEeEEEEEEeC-CCcEEEEEeCCC-CCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS-ASDVMLSFAAF----------PIEIPGEVVFLHP-VHNFALIAYDPS-SLG 381 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~-~~~I~Vt~~d~----------~~~~~A~Vv~~dp-~~DlAILk~d~~-~l~ 381 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+... ...+..+-+.+|| ..|+|||+++.. .+.
T Consensus 22 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~ 97 (240)
T 1si5_H 22 KHICGGSLIK----ESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLD 97 (240)
T ss_dssp SEEEEEEEEE----TTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCS
T ss_pred CeEEEEEEee----CCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccC
Confidence 3679999999 67999999988543 35677766421 2344444445676 589999999743 332
Q ss_pred cccccceeeeeeCCC-CCCCCCCEEEEEEeCC
Q 004068 382 VAGASVVRAAELLPE-PALRRGDSVYLVGLSR 412 (775)
Q Consensus 382 ~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p~ 412 (775)
..+.++.|... ..+..|+.+++.|+..
T Consensus 98 ----~~v~picLp~~~~~~~~~~~~~v~GwG~ 125 (240)
T 1si5_H 98 ----DFVSTIDLPNYGSTIPEKTSCSVYGWGY 125 (240)
T ss_dssp ----SSCCCCBCCCTTCCCCTTCEEEEEESSC
T ss_pred ----CceeccCcCCcCCCCCCCCEEEEEEeCC
Confidence 24555666543 2367899999999753
No 421
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=96.94 E-value=0.022 Score=57.04 Aligned_cols=100 Identities=18% Similarity=0.314 Sum_probs=67.4
Q ss_pred CcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEE
Q 004068 293 PTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFL 364 (775)
Q Consensus 293 ~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~ 364 (775)
|-+|.+..... + .....++|.+|+ .-+|||.+|.+. ..+.|.+.. ....+..+-+..
T Consensus 13 Pw~v~l~~~~~-----~---~~~~~CgGtLI~----~~~VLTAAHC~~---~~~~v~~G~~~~~~~~~~~~~~~v~~~~~ 77 (227)
T 3fzz_A 13 PYMAYYEFLKV-----G---GKKMFCGGFLVR----DKFVLTAAHCKG---RSMTVTLGAHNIKAKEETQQIIPVAKAIP 77 (227)
T ss_dssp TTEEEEEEECS-----S---SCEEEEEEEEEE----TTEEEECTTCCC---EEEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred CCEEEEEEEeC-----C---CceeEEEEEEEe----CCEEEECcccCC---CCcEEEEcccccCCCCCCceEEEEEEEEE
Confidence 56676654322 1 224679999999 679999999874 345566531 124566777788
Q ss_pred eCC-------CcEEEEEeCCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 365 HPV-------HNFALIAYDPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 365 dp~-------~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
||. .|+|||+++.. .+. ..+.++.|.... .+..|+.+++.|+.
T Consensus 78 hp~y~~~~~~~DIALl~L~~~~~~~----~~v~picLp~~~~~~~~~~~~~v~GwG 129 (227)
T 3fzz_A 78 HPDYNPDDRSNDIMLLKLVRNAKRT----RAVRPLNLPRRNAHVKPGDECYVAGWG 129 (227)
T ss_dssp CTTCBTTTTBTCCEEEEESSCCCCB----TTBCCCCCCCTTCCCCTTCEEEEEESS
T ss_pred CcCCCCCCCcCCEEEEEECCcCCCC----CcccccCCCCcccCCCCCCEEEEEECC
Confidence 887 59999999643 332 345566665432 35789999999985
No 422
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=96.92 E-value=0.028 Score=56.64 Aligned_cols=86 Identities=14% Similarity=0.221 Sum_probs=60.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...+.|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. .|+||||++..
T Consensus 26 ~~~CgGsLI~----~~~VLTAAHC~~~---~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~ 98 (227)
T 1euf_A 26 SHICGGFLVR----EDFVLTAAHCLGS---SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKA 98 (227)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCCE---EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCC
T ss_pred ceEEEEEEee----CCEEEECHHHCCC---CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcC
Confidence 4679999999 6799999998753 45666532 134566666777875 59999999643
Q ss_pred CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 379 SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
.+. ..+.++.|.... .+..|+.+.+.|+.
T Consensus 99 ~~~----~~v~picLp~~~~~~~~~~~~~v~GwG 128 (227)
T 1euf_A 99 DIT----DKVSPINLPRSLAEVKPGMMCSVAGWG 128 (227)
T ss_dssp CCC----SSCCCCCCCCTTCCCCTTCEEEEEESC
T ss_pred cCC----CceeccCCCCccccCCCCCEEEEEEEc
Confidence 332 345666665432 35789999999975
No 423
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=96.91 E-value=0.077 Score=53.32 Aligned_cols=171 Identities=14% Similarity=0.206 Sum_probs=92.7
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------C-eEEeEEEEEEeCC-------CcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------P-IEIPGEVVFLHPV-------HNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~-~~~~A~Vv~~dp~-------~DlAILk~d~~ 378 (775)
...++|.+|+ .-+|||.+|.+.. .+.|.+... . ..+..+.+..||. .|+||||++..
T Consensus 25 ~~~CgGtLI~----~~~VLTAAHC~~~---~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~ 97 (234)
T 3s9c_A 25 TIHCAGALIN----REWVLTAAHCDRR---NIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRP 97 (234)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCCT---TEEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSC
T ss_pred cEEEeeEEee----CCEEEEchhhcCC---CceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCc
Confidence 3569999999 6699999998753 344544310 1 1233344444654 49999999743
Q ss_pred -CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCC----CCeeEE---EEEeCCccccccCCCCccccc--ccceEEE
Q 004068 379 -SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSL----QATSRK---SIVTNPCAALNISSADCPRYR--AMNMEVI 448 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~----~~~~~~---g~VS~~~~~~~~~~~~~pryr--a~n~e~I 448 (775)
.+. ..+.++.|.... ...|+.+++.|+.... ...... .+++... ... .|. ......+
T Consensus 98 v~~~----~~v~pi~L~~~~-~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~-----C~~---~~~~~~~~~~~~ 164 (234)
T 3s9c_A 98 VTYS----THIAPVSLPSRS-RGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKW-----CEP---LYPWVPADSRTL 164 (234)
T ss_dssp CCCB----TTBCCCBCCSSC-CCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGG-----TTT---TCTTSCTTSSEE
T ss_pred cccC----CcccccccCCCC-CCCCCeEEEEeeCCCCCCCCCccccccceEecCHHH-----hhh---cccCCCCCcceE
Confidence 332 356667776554 6779999999985321 111122 2222111 011 111 0111122
Q ss_pred EEe-----eccCCC-CCceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCC
Q 004068 449 ELD-----TDFGST-FSGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGA 512 (775)
Q Consensus 449 ~~D-----a~i~~~-~GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~ 512 (775)
-.. ...-.+ +||||+- +++++||.+..... .+ ....-.-| ..+...+++|++..++.
T Consensus 165 Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~g~~~--C~-~~~~p~vy---t~V~~y~~WI~~~i~~~ 227 (234)
T 3s9c_A 165 CAGILKGGRDTCHGDSGGPLIC-NGEMHGIVAGGSEP--CG-QHLKPAVY---TKVFDYNNWIQSIIAGN 227 (234)
T ss_dssp EEECTTSSCBCCTTCTTCEEEE-TTEEEEEEEECCSS--TT-CTTCCEEE---EEGGGGHHHHHHHHHTC
T ss_pred EeecCCCCCccCCCCCCCeEEE-eCCcEEEEEEeCCC--CC-CCCCCcEE---EEhHHhHHHHHHHHcCC
Confidence 221 111123 3999987 57899997643221 00 00111223 66778888888887764
No 424
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=96.88 E-value=0.062 Score=54.04 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=67.6
Q ss_pred CcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC-----CeEEeEEEEEEeCC
Q 004068 293 PTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF-----PIEIPGEVVFLHPV 367 (775)
Q Consensus 293 ~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~-----~~~~~A~Vv~~dp~ 367 (775)
|-+|.+..... + .....++|.+|+ .-+|||.+|.+. +...+.|.+... +..+..+-+..||.
T Consensus 13 Pw~v~l~~~~~-----~---~~~~~CgGtLIs----~~~VLTAAHC~~-~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~ 79 (230)
T 2hlc_A 13 PYQAGLDITLQ-----D---QRRVWCGGSLID----NKWILTAAHCVH-DAVSVVVYLGSAVQYEGEAVVNSERIISHSM 79 (230)
T ss_dssp TTEEEEEEEET-----T---SCEEEEEEEEEE----TTEEEECHHHHT-TEEEEEEEESCSBTTCCSEEEECSEEEECTT
T ss_pred CcEEEEEEEec-----C---CCCEEEEEEEee----CCEEEECHHHCC-CCcceEEEEeeeecCCCCeEEEEEEEEECCC
Confidence 66777654322 1 234679999999 679999988774 455667776431 23455555667764
Q ss_pred -------CcEEEEEeCCCCCCcccccceeeeeeCCCC---CCCCCCEEEEEEeCC
Q 004068 368 -------HNFALIAYDPSSLGVAGASVVRAAELLPEP---ALRRGDSVYLVGLSR 412 (775)
Q Consensus 368 -------~DlAILk~d~~~l~~~~~~~v~~~~lg~s~---~l~~Gd~V~aiG~p~ 412 (775)
.|+||||+++-.+. ..+.++.|.... ....|+.+.+.|+..
T Consensus 80 y~~~~~~~DiALl~L~~~~~~----~~v~picLp~~~~~~~~~~~~~~~v~GwG~ 130 (230)
T 2hlc_A 80 FNPDTYLNDVALIKIPHVEYT----DNIQPIRLPSGEELNNKFENIWATVSGWGQ 130 (230)
T ss_dssp CBTTTTBTCCEEEECSCCCCC----SSCCCCBCCCGGGGGCCCTTCEEEEEESSC
T ss_pred CCCCCccccEEEEEecCCCcC----CcEeeeEcCCccccccccCCcEEEEEeeee
Confidence 69999999842322 345666665433 245799999999854
No 425
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=96.86 E-value=0.025 Score=57.11 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=62.2
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------CeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------PIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+. ....+.|.+... ...+..+-+..||. .|+||||++..
T Consensus 24 ~~~CgGtLI~----~~~VLTAAHC~~-~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v 98 (228)
T 1fxy_A 24 EGFCGGTILS----EFYILTAAHCLY-QAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPI 98 (228)
T ss_dssp CEEEEEEECS----SSEEEECGGGTT-SCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCC
T ss_pred CeeEEEEEee----CCEEEECHHHCC-CCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcc
Confidence 3579999999 679999999874 345566665321 23556666777874 59999999743
Q ss_pred CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... ...|+.+++.|+..
T Consensus 99 ~~~----~~v~picLp~~~-~~~~~~~~v~GwG~ 127 (228)
T 1fxy_A 99 TFR----MNVAPASLPTAP-PATGTKCLISGWGN 127 (228)
T ss_dssp CCB----TTBCCCCCCSSC-CCTTCEEEEEESSC
T ss_pred cCC----CceeccCCCCCC-CCCCCEEEEEecCc
Confidence 332 356667776554 67899999999753
No 426
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=96.83 E-value=0.0089 Score=60.64 Aligned_cols=85 Identities=14% Similarity=0.199 Sum_probs=60.0
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeC------------------CC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHP------------------VH 368 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp------------------~~ 368 (775)
...+.|.+|+ .-+|||.+|.+. ..+.|.+.. ....+..+-+..|| ..
T Consensus 23 ~~~CgGtLI~----~~~VLTAAHC~~---~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~ 95 (237)
T 1ao5_A 23 EHICGGVLLD----RNWVLTAAHCYV---DQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSD 95 (237)
T ss_dssp EEEEEEEEEE----TTEEEECTTCCC---SSCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTT
T ss_pred CeEEEEEEee----CCEEEECHHHCC---CCCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCC
Confidence 3679999999 679999999874 234555432 12445566667776 57
Q ss_pred cEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeC
Q 004068 369 NFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLS 411 (775)
Q Consensus 369 DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p 411 (775)
|+|||+++.. .+. ..+.++.|.... ...|+.+++.|+.
T Consensus 96 DIALl~L~~~~~~~----~~v~picL~~~~-~~~~~~~~v~GwG 134 (237)
T 1ao5_A 96 DLMLLRLSKPADIT----DVVKPIALPTKE-PKPGSKCLASGWG 134 (237)
T ss_dssp CCEEEEESSCCCCC----SSSCCCCCCCSC-CCTTCEEEEEESC
T ss_pred CEEEEEeCCccccC----CceeCCCcCCCC-CCCCCEEEEEECC
Confidence 9999999643 332 346667776554 6899999999975
No 427
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=96.83 E-value=0.018 Score=57.64 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=60.2
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC-CceEEEEEcCC--------CeEEeEEEEEEe------CCCcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS-ASDVMLSFAAF--------PIEIPGEVVFLH------PVHNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~-~~~I~Vt~~d~--------~~~~~A~Vv~~d------p~~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+... ...+..+-+..| ...|+||||++..
T Consensus 23 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~ 98 (218)
T 2z7f_E 23 GHFCGATLIA----PNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSA 98 (218)
T ss_dssp EEEEEEEEEE----TTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCC
T ss_pred CcEEEEEEcc----CCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcC
Confidence 3679999999 67999999987543 24566666421 145555555555 2369999999743
Q ss_pred CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 99 ~~~----~~v~picL~~~~~~~~~~~~~~v~GwG~ 129 (218)
T 2z7f_E 99 TIN----ANVQVAQLPAQGRRLGNGVQCLAMGWGL 129 (218)
T ss_dssp CCS----SSCCCCCCCCTTCCCCTTCEEEEEESSB
T ss_pred cCC----CceeccCcCCCCCCCCCCCEEEEEEeCC
Confidence 332 345666665433 357899999999853
No 428
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=96.82 E-value=0.063 Score=53.90 Aligned_cols=86 Identities=14% Similarity=0.190 Sum_probs=60.2
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. .|+|||+++..
T Consensus 23 ~~~CgGtLIs----~~~VLTAAHC~~~---~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~ 95 (223)
T 1lo6_A 23 HLLCGGVLIH----PLWVLTAAHCKKP---NLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPA 95 (223)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCCT---TCEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCC
T ss_pred CEEEEeEEec----CCEEEECccCCCC---CeEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcc
Confidence 3679999999 6799999998752 34455431 134556666677874 59999999643
Q ss_pred CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... ...|+.++++|+..
T Consensus 96 ~~~----~~v~pi~l~~~~-~~~~~~~~v~GwG~ 124 (223)
T 1lo6_A 96 KLS----ELIQPLPLERDC-SANTTSCHILGWGK 124 (223)
T ss_dssp CCB----TTBCCCCBCCCT-TCCCCEEEEEESSC
T ss_pred cCC----CceeecccCCCC-CCCCCEEEEEEECC
Confidence 332 346667776554 57899999999853
No 429
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=96.79 E-value=0.056 Score=54.43 Aligned_cols=177 Identities=15% Similarity=0.202 Sum_probs=93.0
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------C-eEEeEEEEEEeCC-------CcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------P-IEIPGEVVFLHPV-------HNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~-~~~~A~Vv~~dp~-------~DlAILk~d~~ 378 (775)
...++|.+|+ .-+|||.+|.+... +.|.+... . ..+..+.+..||. .|+||||++..
T Consensus 25 ~~~CgGtLI~----~~~VLTAAHC~~~~---~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~ 97 (238)
T 4e7n_A 25 TLFCGGTLIN----QEWVLTAAHCDRKN---FRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSP 97 (238)
T ss_dssp CEEEEEEECS----SSEEEECGGGCCSS---CEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSC
T ss_pred CEEEEEEEec----CCEEEEhHHcCCCC---CeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCC
Confidence 4679999999 67999999987532 33433210 1 2334445555653 59999999743
Q ss_pred -CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCC------CCeeEEEEEeCCccccccCCCCcccccc-cceEEEEE
Q 004068 379 -SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSL------QATSRKSIVTNPCAALNISSADCPRYRA-MNMEVIEL 450 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~------~~~~~~g~VS~~~~~~~~~~~~~pryra-~n~e~I~~ 450 (775)
.+. ..+.++.|.... ...|+.+++.|+.... ........+.-+ .........+.+.. .....+-.
T Consensus 98 v~~~----~~v~pi~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~--~~~~C~~~~~~~~~~~~~~~~Ca 170 (238)
T 4e7n_A 98 VKNS----KHIAPFSLPSSP-PSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLL--EYEMCRAPYPEFELPATSRTLCA 170 (238)
T ss_dssp CCCB----TTBCCCCCCSSC-CCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEE--CGGGGTTTCGGGCCCSCCSEEEE
T ss_pred ccCC----CceeeeeCCCCC-CCCCCEEEEEECCCCCCCCCCCCccceEeecccc--CHHHHhhhcccccCCCCCCeEEe
Confidence 332 356667776554 6779999999985321 111222222210 00011111111100 11112221
Q ss_pred e-----eccCCC-CCceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCC
Q 004068 451 D-----TDFGST-FSGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGA 512 (775)
Q Consensus 451 D-----a~i~~~-~GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~ 512 (775)
. ...-.+ +||||+- +++++||.+...+. .+ ....-.-| ..+...+++|++..++.
T Consensus 171 ~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~--C~-~~~~p~vy---t~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 171 GILEGGKDTCKGDSGGPLIC-NGQFQGIASWGDDP--CA-QPHKPAAY---TKVFDHLDWIENIIAGN 231 (238)
T ss_dssp ECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSS--TT-CTTCCEEE---EESGGGHHHHHHHHTTC
T ss_pred CCCCCCCccCCCCCCcceEE-CCEEEEEEEEeCCC--CC-CCCCCeEE---EEhHHHHHHHHHHHhcC
Confidence 1 111123 3999986 67899997632221 00 00111223 66778889998887663
No 430
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=96.77 E-value=0.022 Score=57.55 Aligned_cols=85 Identities=14% Similarity=0.192 Sum_probs=58.0
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC---------CeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF---------PIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~---------~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
..++|.+|+ .-+|||.+|.+.. .+.|.+... ...+..+-+..||. .|+||||++..
T Consensus 23 ~~CgGsLIs----~~~VLTAAHC~~~---~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v 95 (231)
T 2aiq_A 23 SLCGGTLIN----QEWVLTARHCDRG---NMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPV 95 (231)
T ss_dssp EEEEEEECS----SSEEEECGGGCCS---SCEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCC
T ss_pred CeEEEEEEe----CCEEEEcHHcCCC---CCEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCC
Confidence 469999999 6799999998754 234444210 13455566667764 49999999743
Q ss_pred CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... ...|+.++++|+..
T Consensus 96 ~~~----~~v~picL~~~~-~~~~~~~~v~GwG~ 124 (231)
T 2aiq_A 96 RNS----AHIAPLSLPSNP-PSVGSVCRIMGWGT 124 (231)
T ss_dssp CCB----TTBCCCCCCSSC-CCTTCEEEEEESSC
T ss_pred CCC----CcEEeeECCCCC-CCCCCEEEEEeCCc
Confidence 332 356667776554 57899999999853
No 431
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=96.73 E-value=0.047 Score=54.92 Aligned_cols=85 Identities=16% Similarity=0.268 Sum_probs=61.1
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-CCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA------FPIEIPGEVVFLHPV-------HNFALIAYDPS-SLG 381 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d------~~~~~~A~Vv~~dp~-------~DlAILk~d~~-~l~ 381 (775)
..++|.+|+ .-+|||.+|.+. ..+.|.+.. ....+..+-+..||. .|+|||+++.. .+.
T Consensus 24 ~~CgGtLI~----~~~VLTAAHC~~---~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~ 96 (224)
T 2qxi_A 24 LHCGGVLVN----ERWVLTAAHCKM---NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLS 96 (224)
T ss_dssp EEEEEEEEE----TTEEEECGGGCC---SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCB
T ss_pred eEEEEEEec----CCEEEEhHHcCC---CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCC
Confidence 379999999 679999999873 456666532 134566666778875 69999999643 332
Q ss_pred cccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 382 VAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 382 ~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
..+.++.|.... ...|+.++++|+..
T Consensus 97 ----~~v~picL~~~~-~~~~~~~~v~GwG~ 122 (224)
T 2qxi_A 97 ----SMVKKVRLPSRC-EPPGTTCTVSGWGT 122 (224)
T ss_dssp ----TTBCCCCCCSSC-CCTTCEEEEEESSC
T ss_pred ----CceeeEECCCCC-CCCCCEEEEEeCCc
Confidence 356667776554 57899999999854
No 432
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=96.72 E-value=0.021 Score=57.70 Aligned_cols=88 Identities=15% Similarity=0.171 Sum_probs=61.2
Q ss_pred eeEEEEEEEecCCceEEEEecceeccC-------CceEEEEEcC---------CCeEEeEEEEEEeC-------CCcEEE
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAIS-------ASDVMLSFAA---------FPIEIPGEVVFLHP-------VHNFAL 372 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~-------~~~I~Vt~~d---------~~~~~~A~Vv~~dp-------~~DlAI 372 (775)
..++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..|| ..|+||
T Consensus 25 ~~CgGtLI~----~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAL 100 (241)
T 3ncl_A 25 HICGASLIS----PNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIAL 100 (241)
T ss_dssp EEEEEEECS----SSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEE
T ss_pred eEEEEEEee----CCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEE
Confidence 579999999 67999999987543 3455665531 13567777788888 469999
Q ss_pred EEeCCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 373 IAYDPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 373 Lk~d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
||++.. .+. ..+.++.|.... .+..|+.+++.|+.
T Consensus 101 l~L~~~~~~~----~~v~piclp~~~~~~~~~~~~~v~GwG 137 (241)
T 3ncl_A 101 LELEKPAEYS----SMVRPISLPDASHVFPAGKAIWVTGWG 137 (241)
T ss_dssp EEESSCCCCC----SSCCCCBCCCTTCCCCTTCEEEEEESS
T ss_pred EEECCCCccc----CccCceEcCCcccCCCCCCEEEEEEec
Confidence 999643 332 345566664332 25689999999984
No 433
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=96.72 E-value=0.0091 Score=60.06 Aligned_cols=179 Identities=16% Similarity=0.183 Sum_probs=95.2
Q ss_pred eeEEEEEEEecCCceEEEEecceecc-CCceEEEEEcC-----CCeEEeEEEEEEe------CCCcEEEEEeCCC-CCCc
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAI-SASDVMLSFAA-----FPIEIPGEVVFLH------PVHNFALIAYDPS-SLGV 382 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~-~~~~I~Vt~~d-----~~~~~~A~Vv~~d------p~~DlAILk~d~~-~l~~ 382 (775)
..++|.+|+ .-+|||.+|.+.. ....+.|.+.. .+..+..+-+..| ...|+|||+++.. .+..
T Consensus 24 ~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~ 99 (235)
T 3h7t_A 24 PFCGGSILT----ANFVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDD 99 (235)
T ss_dssp CCEEEEESS----SSEEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCS
T ss_pred ceEeEEEee----CCEEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCC
Confidence 569999999 6699999998742 34567776642 1245555555554 2359999999743 3321
Q ss_pred ccccceeeeeeCCCC-CCCCCCEEEEEEeCCCC------CCeeEEEEEe---CCccccccCCCCcccccccceEEEEEe-
Q 004068 383 AGASVVRAAELLPEP-ALRRGDSVYLVGLSRSL------QATSRKSIVT---NPCAALNISSADCPRYRAMNMEVIELD- 451 (775)
Q Consensus 383 ~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~g~------~~~~~~g~VS---~~~~~~~~~~~~~pryra~n~e~I~~D- 451 (775)
..+.++.|.... .+..|+.+++.|+.... ........+. ...............+ .....+-..
T Consensus 100 ---~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~--~~~~~~Ca~~ 174 (235)
T 3h7t_A 100 ---KTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKY--IYDGVFCAGG 174 (235)
T ss_dssp ---SSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGG--CSTTEEEECB
T ss_pred ---ccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCcc--ccCCeEecCC
Confidence 145556664432 26889999999985321 1122222222 1100000000000000 001122111
Q ss_pred ----eccCCC-CCceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCC
Q 004068 452 ----TDFGST-FSGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGA 512 (775)
Q Consensus 452 ----a~i~~~-~GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~ 512 (775)
...-.+ +||||+- +|+++||.+...+ .....-.-| ..+...+++|++..++.
T Consensus 175 ~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~-----C~~~~p~vy---t~v~~~~~WI~~~i~~~ 231 (235)
T 3h7t_A 175 EYDETYIGYGDAGDPAVQ-NGTLVGVASYISS-----MPSEFPSVF---LRVGYYVLDIKDIISGK 231 (235)
T ss_dssp TTTTBBCCTTCTTCEEEE-TTEEEEEECCCTT-----CCTTSCEEE---EEGGGGHHHHHHHHTTC
T ss_pred CCCCCccccCCCCCceee-CCeEEEEEEecCC-----CCCCCCceE---EEHHHHHHHHHHHHhCC
Confidence 112223 3999997 7899999763211 111111223 66778888888887663
No 434
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=96.70 E-value=0.037 Score=55.57 Aligned_cols=173 Identities=14% Similarity=0.177 Sum_probs=92.0
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCe-EEeEEEEEEeCC-------CcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPI-EIPGEVVFLHPV-------HNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~-~~~A~Vv~~dp~-------~DlAILk~d~~ 378 (775)
...++|.+|+ .-+|||.+|.+... +.|.+.. ... ....+.+..||. .|+|||+++..
T Consensus 23 ~~~CgGtLI~----~~~VLTAAHC~~~~---~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~ 95 (234)
T 3s69_A 23 GFFCSGTLIN----EEWVLTAAHCDNTN---FQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSR 95 (234)
T ss_dssp CEEEEEEEEE----TTEEEECGGGCCSS---CEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSC
T ss_pred CeEEeEEEee----CCEEEEchhhCCCC---ceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCc
Confidence 3679999999 67999999987532 3333321 011 233445555654 59999999743
Q ss_pred -CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCC------CeeEEE---EEeCCccccccCCCCcccccccceEEE
Q 004068 379 -SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQ------ATSRKS---IVTNPCAALNISSADCPRYRAMNMEVI 448 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~------~~~~~g---~VS~~~~~~~~~~~~~pryra~n~e~I 448 (775)
.+. ..+.++.|.... ...|+.+++.|+..... ...... +++............ .....+
T Consensus 96 v~~~----~~v~pi~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~------~~~~~~ 164 (234)
T 3s69_A 96 VSNS----EHIVPLSLPSSP-PSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELL------TEYRTL 164 (234)
T ss_dssp CCCB----TTBCCCCCCSSC-CCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCC------TTSCEE
T ss_pred CCCC----CcceeeecCCCC-CCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhccccc------CCcceE
Confidence 332 356667776554 67799999999853211 111222 222110000000000 001122
Q ss_pred EEe-----eccCCC-CCceEEccCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHcCC
Q 004068 449 ELD-----TDFGST-FSGVLTDEHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIISGA 512 (775)
Q Consensus 449 ~~D-----a~i~~~-~GGpL~d~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~g~ 512 (775)
-.. ...-.+ +||||+- +++++||.+..... .+ ....-.-| ..+...+++|++..++.
T Consensus 165 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~--C~-~~~~p~vy---t~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 165 CAGILEGGKDTCGGDSGGPLIC-NGQFQGIVSFGAHP--CG-QGLKPGVY---TKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp EEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSS--TT-CTTCCEEE---EEGGGGHHHHHHHHHTC
T ss_pred eccCCCCCCccCCCCCccceEE-cCEEEEEEEEcccc--cC-CCCCCcEE---eeHHHHHHHHHHHhcCC
Confidence 111 111123 3999986 67899997632221 00 00111223 66778888888887663
No 435
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=96.70 E-value=0.017 Score=58.65 Aligned_cols=88 Identities=22% Similarity=0.257 Sum_probs=63.8
Q ss_pred eeEEEEEEEecCCceEEEEecceecc---------------CCceEEEEEcC--------CCeEEeEEEEEEeCC-----
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAI---------------SASDVMLSFAA--------FPIEIPGEVVFLHPV----- 367 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~---------------~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~----- 367 (775)
..++|.+|+ .-+|||.+|.+.. ...++.|.+.. ....+..+-+..||.
T Consensus 25 ~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~ 100 (251)
T 3gov_B 25 PFCGGSLLG----SSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNT 100 (251)
T ss_dssp EEEEEEEET----TTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTT
T ss_pred eeEEEEEec----CCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCC
Confidence 579999999 6799999998853 23466776642 135566777888887
Q ss_pred --CcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 368 --HNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 368 --~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.|+|||+++.. .+. ..+.++.|.... ...|+.+++.|+..
T Consensus 101 ~~~DIAll~L~~~~~~~----~~v~picLp~~~-~~~~~~~~v~GwG~ 143 (251)
T 3gov_B 101 FENDVALVELLESPVLN----AFVMPICLPEGP-QQEGAMVIVSGWGK 143 (251)
T ss_dssp TBTCCEEEEESSCCCCS----SSCCCCBCCSSC-CCTTCEEEEEECSC
T ss_pred CCCCEEEEEeCCcccCC----CceEEeECCCCC-CCCCCEEEEEcCCC
Confidence 59999999643 332 356667776554 58899999999853
No 436
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=96.69 E-value=0.026 Score=56.72 Aligned_cols=86 Identities=17% Similarity=0.268 Sum_probs=60.6
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC---------CCeEEeEEEEEEeCC-------CcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA---------FPIEIPGEVVFLHPV-------HNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d---------~~~~~~A~Vv~~dp~-------~DlAILk~d~~ 378 (775)
...++|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. .|+||||++..
T Consensus 23 ~~~CgGsLIs----~~~VLTAAHC~~~---~~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~ 95 (223)
T 2bdg_A 23 ELFCSGVLVH----PQWVLSAAHCFQN---SYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDES 95 (223)
T ss_dssp CEEEEEEEEE----TTEEEECGGGCCS---SEEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSC
T ss_pred CEEEEEEEec----CCEEEEhHHhCCC---CeEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCc
Confidence 3679999999 6799999998753 34444421 134566666778875 59999999753
Q ss_pred -CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 379 -SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.+.. ...|+.+++.|+..
T Consensus 96 v~~~----~~v~pi~l~~~~-~~~~~~~~v~GwG~ 125 (223)
T 2bdg_A 96 VSES----DTIRSISIASQC-PTAGNSCLVSGWGL 125 (223)
T ss_dssp CCCC----SSCCCCCBCSSC-CCTTCEEEEEESCC
T ss_pred ccCC----CceecccCCCCC-CCCCCEEEEEeCcc
Confidence 222 346667776554 68899999999854
No 437
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=96.65 E-value=0.0093 Score=60.60 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=62.9
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC-CceEEEEEcC-------CCeEEeEEEEEEeCCC---------cEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS-ASDVMLSFAA-------FPIEIPGEVVFLHPVH---------NFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~-~~~I~Vt~~d-------~~~~~~A~Vv~~dp~~---------DlAILk~d~ 377 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||.. |+||||++.
T Consensus 26 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~ 101 (241)
T 1m9u_A 26 SHSCGASLLS----STSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLAT 101 (241)
T ss_dssp EEEEEEEECS----SSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESS
T ss_pred eeeeEEEEEe----CCEEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecC
Confidence 3679999999 67999999987542 3557777631 1456777778888865 999999974
Q ss_pred C-CCCcccccceeeeeeCCC-CCCCCCCEEEEEEeCC
Q 004068 378 S-SLGVAGASVVRAAELLPE-PALRRGDSVYLVGLSR 412 (775)
Q Consensus 378 ~-~l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p~ 412 (775)
. .+. ..+.++.|... .....|+.+++.|+..
T Consensus 102 ~v~~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (241)
T 1m9u_A 102 SISLG----GNIQAAVLPANNNNDYAGTTCVISGWGR 134 (241)
T ss_dssp CCCCC----SSCCCCCCCSCSSCCCTTCEEEEEESSC
T ss_pred ccccC----CCccccCcCCCcCCCCCCCEEEEEeCcc
Confidence 3 332 24556666554 2123899999999853
No 438
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=96.65 E-value=0.018 Score=58.45 Aligned_cols=85 Identities=14% Similarity=0.169 Sum_probs=55.6
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC------------------Cc
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV------------------HN 369 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~------------------~D 369 (775)
..+.|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. .|
T Consensus 27 ~~CgGsLIs----~~~VLTAAHC~~~---~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~D 99 (240)
T 1sgf_A 27 YQCGGVLLD----RNWVLTAAHCYND---KYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSND 99 (240)
T ss_dssp CCEEEEECS----SSEEEECGGGCCS---CCEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTC
T ss_pred eEEEEEEec----CCEEEECHHhCCC---CceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCc
Confidence 579999999 6799999998752 23444421 134455555666654 59
Q ss_pred EEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 370 FALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 370 lAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
+|||+++.. .+. ..+.++.|.... ...|+.+++.|+..
T Consensus 100 IALl~L~~~~~~~----~~v~picL~~~~-~~~~~~~~v~GwG~ 138 (240)
T 1sgf_A 100 LMLLRLSKPADIT----DVVKPITLPTEE-PKLGSTCLASGWGS 138 (240)
T ss_dssp CEEEEESSCCCCC----SSCCCCCCCCSC-CCTTCEEEEC----
T ss_pred eEEEEeCCcCcCC----CcccccCCCCCC-CCCCCEEEEEecCC
Confidence 999999643 332 346667776554 67899999999753
No 439
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=96.60 E-value=0.033 Score=56.32 Aligned_cols=87 Identities=13% Similarity=0.142 Sum_probs=59.6
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------CeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------PIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...+.|.+|+ .-+|||.+|.+... .+.|.+... ...+..+-+..||. .|+||||++..
T Consensus 23 ~~~CgGtLIs----~~~VLTAAHC~~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~ 96 (234)
T 1orf_A 23 KTICAGALIA----KDWVLTAAHCNLNK--RSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKA 96 (234)
T ss_dssp SCEEEEEEEE----TTEEEECTTCCCCT--TCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCC
T ss_pred ceEEEEEEee----CCEEEEchhcCCCC--CceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcC
Confidence 3579999999 67999999987643 344544321 24666777778874 59999999643
Q ss_pred CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 379 SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
.+. ..+.++.|.... .+..|+.+++.|+.
T Consensus 97 ~~~----~~v~picLp~~~~~~~~~~~~~v~GwG 126 (234)
T 1orf_A 97 KIN----KYVTILHLPKKGDDVKPGTMCQVAGWG 126 (234)
T ss_dssp CCS----SSSCCCCCCSSCCCCCTTCEEEEEESS
T ss_pred ccC----CCeeeeecCCCcCCCCCCCEEEEEECC
Confidence 332 245556665432 25789999999974
No 440
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=96.60 E-value=0.031 Score=56.71 Aligned_cols=90 Identities=11% Similarity=0.044 Sum_probs=59.9
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~ 377 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. .|+|||+++.
T Consensus 26 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~ 101 (241)
T 2any_A 26 RHLCGGSLIG----HQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQA 101 (241)
T ss_dssp EEEEEEEEEE----TTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESS
T ss_pred ceEEEEEEec----CCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCC
Confidence 4679999999 67999999987543 2345555421 123455666777874 5999999964
Q ss_pred C-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 378 S-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 378 ~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
. .+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 102 ~v~~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (241)
T 2any_A 102 PLEYT----EFQKPISLPSKGDTSTIYTNCWVTGWGF 134 (241)
T ss_dssp CCCCB----TTBCCCCCCCSSCCSTTCSEEEEEESSC
T ss_pred cccCC----CCcceeEcCCcccCCCCCCeEEEEeccc
Confidence 3 332 345556665432 257899999999853
No 441
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=96.59 E-value=0.076 Score=53.38 Aligned_cols=86 Identities=12% Similarity=0.128 Sum_probs=59.5
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC---------CCeEEeEEEEEEeCC-------CcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA---------FPIEIPGEVVFLHPV-------HNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d---------~~~~~~A~Vv~~dp~-------~DlAILk~d~~ 378 (775)
...++|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. .|+||||++..
T Consensus 24 ~~~CgGtLIs----~~~VLTAAHC~~~---~~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~ 96 (227)
T 2psx_A 24 QLYCGAVLVH----PQWLLTAAHCRKK---VFRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRR 96 (227)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCCS---SCEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSC
T ss_pred CceEEEEEEc----CCEEEEhHHcCCC---CcEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCC
Confidence 4679999999 7799999998753 33454431 134566666667764 59999999753
Q ss_pred -CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 379 -SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... +..|+.+++.|+..
T Consensus 97 ~~~~----~~v~pi~l~~~~-~~~~~~~~v~GwG~ 126 (227)
T 2psx_A 97 IRPT----KDVRPINVSSHC-PSAGTKCLVSGWGT 126 (227)
T ss_dssp CCCC----SSSCCCCBCSSC-CCTTCEEEEEESSC
T ss_pred CCCC----CceeeeECCCCC-CCCCCEEEEEeCcc
Confidence 222 345667776543 78999999999853
No 442
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=96.55 E-value=0.034 Score=56.66 Aligned_cols=90 Identities=16% Similarity=0.236 Sum_probs=62.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC-----CCeEEeEEEEEEeCC--------CcEEEEEeCCC-CC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA-----FPIEIPGEVVFLHPV--------HNFALIAYDPS-SL 380 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d-----~~~~~~A~Vv~~dp~--------~DlAILk~d~~-~l 380 (775)
...+.|.+|+ .-+|||.+|.+......+.|.+.. .+..+..+-+..||. .|+||||++.. .+
T Consensus 23 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~ 98 (240)
T 2zgc_A 23 SHLCGGVLVH----PKWVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKP 98 (240)
T ss_dssp EEEEEEEEEE----TTEEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCC
T ss_pred CeEEEEEEEc----CCEEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccC
Confidence 3679999999 679999999886554467777642 134566666666653 59999999743 32
Q ss_pred CcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 381 GVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 381 ~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
. ..+.++.|.... .+..|+.+++.|+..
T Consensus 99 ~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 127 (240)
T 2zgc_A 99 S----RTIRPLALPSKRQVVAAGTRCSMAGWGL 127 (240)
T ss_dssp C----SSCCCCCCCCTTCCCCTTCEEEEEECCB
T ss_pred C----CceeeeEcCCCCCCCCCCCEEEEEECCc
Confidence 2 345566665433 357899999999853
No 443
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=96.52 E-value=0.031 Score=56.56 Aligned_cols=86 Identities=17% Similarity=0.260 Sum_probs=60.1
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEc--------CCCeEEeEEEEEEeC------------------CC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFA--------AFPIEIPGEVVFLHP------------------VH 368 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~--------d~~~~~~A~Vv~~dp------------------~~ 368 (775)
...+.|.+|+ .-+|||.+|.+... . .|.+. +.+..+..+-+..|| .+
T Consensus 23 ~~~CgGsLIs----~~~VLTAAHC~~~~-~--~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~ 95 (237)
T 2zch_P 23 RAVCGGVLVH----PQWVLTAAHCIRNK-S--VILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSH 95 (237)
T ss_dssp SEEEEEEEEE----TTEEEECGGGCCSS-C--EEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTT
T ss_pred CeEEEEEEec----CCEEEEcHHhcCCC-c--eEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCc
Confidence 3679999999 67999999987543 2 23332 113566666677787 56
Q ss_pred cEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 369 NFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 369 DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
|+||||++.. .+. ..+.++.|.+.. ...|+.+++.|+..
T Consensus 96 DIALl~L~~~~~~~----~~v~pi~Lp~~~-~~~~~~~~v~GwG~ 135 (237)
T 2zch_P 96 DLMLLRLSEPAELT----DAVKVMDLPTQE-PALGTTCYASGWGS 135 (237)
T ss_dssp CCEEEEESSCCCCC----SSCCCCCCCSSC-CCTTCEEEEEESCC
T ss_pred ceEEEEeCCCCccC----CcEeeeECCCCC-CCCCCEEEEEeCCc
Confidence 9999999643 332 346667776544 67899999999853
No 444
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=96.51 E-value=0.013 Score=58.74 Aligned_cols=90 Identities=14% Similarity=0.171 Sum_probs=56.6
Q ss_pred eeEEEEEEEecCCceEEEEecceecc-CCceEEEEEcC-------CCeEEeEEEEEEe------CCCcEEEEEeCCC-CC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAI-SASDVMLSFAA-------FPIEIPGEVVFLH------PVHNFALIAYDPS-SL 380 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~-~~~~I~Vt~~d-------~~~~~~A~Vv~~d------p~~DlAILk~d~~-~l 380 (775)
..++|.+|+ .-+|||.+|.+.. ....+.|.+.. ....+..+-+..| ...|||||+++.. .+
T Consensus 26 ~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~ 101 (228)
T 3h7o_A 26 LTCGGAILS----QWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKL 101 (228)
T ss_dssp EEEEEEESS----SSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCC
T ss_pred eEeeeEEee----CCEEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCcccc
Confidence 379999999 6799999998742 23445565531 0223344444444 2369999999643 22
Q ss_pred CcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 381 GVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 381 ~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
.. ..+.++.|.... .+..|+.+++.|+..
T Consensus 102 ~~---~~v~pi~lp~~~~~~~~~~~~~v~GwG~ 131 (228)
T 3h7o_A 102 DG---LKSKPAKLPDIEFRPKTGSDVLVSGYGD 131 (228)
T ss_dssp CS---SSSCCCBCCCTTCCCCTTCEEEEEECCC
T ss_pred cc---cccccccCCccccCCCCCCeeEEEEEec
Confidence 20 145556665432 268899999999853
No 445
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=96.48 E-value=0.099 Score=52.94 Aligned_cols=177 Identities=12% Similarity=0.148 Sum_probs=100.6
Q ss_pred hcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEe-E-EE--EEEeC
Q 004068 291 IEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIP-G-EV--VFLHP 366 (775)
Q Consensus 291 l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~-A-~V--v~~dp 366 (775)
+...++.++... || ...+-.|+... .+|+||+|......+.+.|+... |.-.- - +- +..=+
T Consensus 22 Ia~~ic~l~n~s------dg---~~~~l~gigyG-----~~iItn~HLf~~nnG~L~I~s~h-G~f~v~nt~~lki~~i~ 86 (229)
T 1lvm_A 22 ISSTICHLTNES------DG---HTTSLYGIGFG-----PFIITNKHLFRRNNGTLLVQSLH-GVFKVKNTTTLQQHLID 86 (229)
T ss_dssp HHTTEEEEEEEE------TT---EEEEEEEEEET-----TEEEECGGGGGCCSSEEEEEETT-EEEEESCGGGSEEEECT
T ss_pred hheEEEEEEecc------CC---ceEEEEEEeEC-----CEEEeChhhhccCCCcEEEEeCC-CeEEeCCCCceeeEEeC
Confidence 446777775432 33 22344555555 48999988777666888888864 33211 0 11 23335
Q ss_pred CCcEEEEEeCCCCCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcccccccceE
Q 004068 367 VHNFALIAYDPSSLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCPRYRAMNME 446 (775)
Q Consensus 367 ~~DlAILk~d~~~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~pryra~n~e 446 (775)
..|+.|+|.... +|+ --+-++|.. .+.||+|..||..+.... ...+||+. +...+....-.+ ..
T Consensus 87 g~DiiiIrmPkD-fpP----f~~~l~FR~---P~~~e~V~lVg~~fq~k~--~~s~vSes--S~i~p~~~~~fW----kH 150 (229)
T 1lvm_A 87 GRDMIIIRMPKD-FPP----FPQKLKFRE---PQREERICLVTTNFQTKS--MSSMVSDT--SCTFPSSDGIFW----KH 150 (229)
T ss_dssp TSSCEEEECCTT-SCC----CCSCCCBCC---CCTTCEEEEEEEECSSSS--CEEEECCC--EECEEETTTTEE----EE
T ss_pred CccEEEEeCCCc-CCC----cccccccCC---CCCCCeEEEEEeEeecCC--ccEEECCc--ceeEecCCCCEe----EE
Confidence 679999998643 432 111244532 589999999998754433 23456653 222111111112 13
Q ss_pred EEEEeeccCCCCCceEEcc-CceEEEEeeeecccccccCCCCCCceeeeccccchhhhHHHHHHc
Q 004068 447 VIELDTDFGSTFSGVLTDE-HGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVLDKIIS 510 (775)
Q Consensus 447 ~I~~Da~i~~~~GGpL~d~-~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl~~l~~ 510 (775)
.|.+. .+.||.||++. ||.+|||.+..... ...+|.-++|-+.+ ..|+...+
T Consensus 151 wIsT~---~G~CGlPlVs~~Dg~IVGiHsl~~~~--------~~~NyF~~f~~~f~-~~L~~~~~ 203 (229)
T 1lvm_A 151 WIQTK---DGQCGSPLVSTRDGFIVGIHSASNFT--------NTNNYFTSVPKNFM-ELLTNQEA 203 (229)
T ss_dssp CBCCC---TTCTTCEEEETTTCCEEEEEEEEETT--------SCSEEEEECCTTHH-HHHHCGGG
T ss_pred EeeCC---CCcCCCcEEECCCCcEEEEEcccccC--------CCeEEEeCCCHHHH-HHHhcccc
Confidence 33332 23479999995 69999999865543 33566556665555 66666543
No 446
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=96.47 E-value=0.029 Score=56.88 Aligned_cols=86 Identities=15% Similarity=0.133 Sum_probs=61.7
Q ss_pred eEEEEEEEecCCceEEEEecceeccC----CceEEEEEcC------CC--eEEeEEEEEEeCC-------CcEEEEEeCC
Q 004068 317 FGTGVIIYHSQSMGLVVVDKNTVAIS----ASDVMLSFAA------FP--IEIPGEVVFLHPV-------HNFALIAYDP 377 (775)
Q Consensus 317 ~GSGvVId~~~~~GlVLTnr~~V~~~----~~~I~Vt~~d------~~--~~~~A~Vv~~dp~-------~DlAILk~d~ 377 (775)
.++|.+|+ .-+|||.+|.+... ...+.|.+.. .+ ..+..+-+..||. .|+||||++.
T Consensus 29 ~CgGtLIs----~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~ 104 (237)
T 2f91_A 29 FCGASIYN----ENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSG 104 (237)
T ss_dssp EEEEEEEE----TTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESS
T ss_pred eEEEEEee----CCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECC
Confidence 39999999 67999999987543 4557777632 01 5566666778875 5999999975
Q ss_pred C-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeC
Q 004068 378 S-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLS 411 (775)
Q Consensus 378 ~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p 411 (775)
. .+. ..+.++.|.+.. ...|+.+++.|+.
T Consensus 105 ~v~~~----~~v~picLp~~~-~~~~~~~~v~GwG 134 (237)
T 2f91_A 105 SLTFN----DNVAPIALPEQG-HTATGDVIVTGWG 134 (237)
T ss_dssp CCCCB----TTBCCCBCCCTT-CCCCSEEEEEESC
T ss_pred CcccC----CceeeccCCCCC-CCCCCcEEEEECC
Confidence 3 332 356677776554 5789999999975
No 447
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.47 E-value=0.0052 Score=75.80 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=54.3
Q ss_pred ceEEEEEEcCC--------ChHhh-h--ccCCCEEEEECCEEeCChhhHHHHHHhcCCCCCCCCeEEEEEEecC-eEEEE
Q 004068 566 QVLRVKGCLAG--------SKAEN-M--LEQGDMMLAINKQPVTCFHDIENACQALDKDGEDNGKLDITIFRQG-REIEL 633 (775)
Q Consensus 566 q~l~V~~V~~g--------SpA~~-a--Lq~GDiILsVNGk~V~s~~dl~~~l~~~~~~~~~g~~v~l~V~R~G-k~~~l 633 (775)
.+++|..|.++ |||++ + |+ ||+|++|||+++..+.++...+... .|.++.|+|.|+| +..++
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~~-----~g~~v~l~v~r~~~~~~~~ 821 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSEK-----AGTSARIRLSGKGGDKRDL 821 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHTT-----TTSEEEEEEECSSSCEEEE
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcCC-----CCCEEEEEEECCCCceEEE
Confidence 45678899987 99997 6 99 9999999999999999888777532 3789999999987 55567
Q ss_pred EEEe
Q 004068 634 QVGT 637 (775)
Q Consensus 634 ~V~l 637 (775)
++..
T Consensus 822 ~~~~ 825 (1045)
T 1k32_A 822 MIDI 825 (1045)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 6663
No 448
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=96.45 E-value=0.22 Score=50.16 Aligned_cols=92 Identities=14% Similarity=0.184 Sum_probs=61.6
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEEEEeCC---------CcEEEEEe
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVVFLHPV---------HNFALIAY 375 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv~~dp~---------~DlAILk~ 375 (775)
...++|.+|+ .-+|||.+|.+... ..++.|.+.. ....+..+-+..||. .|+|||++
T Consensus 28 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L 103 (247)
T 3mhw_U 28 TYVCGGSLIS----PCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKI 103 (247)
T ss_dssp EEEEEEEEEE----TTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEE
T ss_pred ceEEEEEEEe----CCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEe
Confidence 4679999999 67999999987542 3456666542 134566676777775 49999999
Q ss_pred CCCC---CCcccccceeeeeeCCC-CCCCCCCEEEEEEeCC
Q 004068 376 DPSS---LGVAGASVVRAAELLPE-PALRRGDSVYLVGLSR 412 (775)
Q Consensus 376 d~~~---l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p~ 412 (775)
+... +.. ...+.++.|... ..+..|+.+++.|+..
T Consensus 104 ~~~~~~~~~~--~~~v~pi~lp~~~~~~~~~~~~~v~GwG~ 142 (247)
T 3mhw_U 104 RSKEGRCAQP--SRTIQTISLPSMYNDPQFGTSCEITGFGK 142 (247)
T ss_dssp ECTTSCCCCC--BTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CCcccccccc--CCcccccccCCCcCCCCCCCEEEEEecCC
Confidence 6431 111 134566666542 2367899999999853
No 449
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=96.42 E-value=0.14 Score=51.69 Aligned_cols=90 Identities=14% Similarity=0.215 Sum_probs=61.7
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC---CceEEEEEcC----------CCeEEeEEEEEEeCC-CcEEEEEeCCC-C
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS---ASDVMLSFAA----------FPIEIPGEVVFLHPV-HNFALIAYDPS-S 379 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~---~~~I~Vt~~d----------~~~~~~A~Vv~~dp~-~DlAILk~d~~-~ 379 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. .|+|||+++.. .
T Consensus 21 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~ 96 (234)
T 2asu_B 21 QHFCGGSLVK----EQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVT 96 (234)
T ss_dssp CEEEEEEEEE----TTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCC
T ss_pred CEEEEEEEEe----CCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCc
Confidence 4679999999 67999999988532 3455666531 124556666677875 79999999743 3
Q ss_pred CCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 380 LGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 380 l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 97 ~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 126 (234)
T 2asu_B 97 LN----QRVALICLPPEWYVVPPGTKCEIAGWGE 126 (234)
T ss_dssp CS----SSSCCCBCCCTTCCCCTTCEEEEEESSC
T ss_pred CC----CcEeccCCCCccccCCCCCEEEEEeCCc
Confidence 32 345666665432 357899999999753
No 450
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=96.38 E-value=0.34 Score=48.59 Aligned_cols=89 Identities=12% Similarity=0.170 Sum_probs=61.5
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC----CCeEEeEEEEEEeCC-------CcEEEEEeCCC-CC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA----FPIEIPGEVVFLHPV-------HNFALIAYDPS-SL 380 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d----~~~~~~A~Vv~~dp~-------~DlAILk~d~~-~l 380 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. .|+||||++.. .+
T Consensus 23 ~~~CgGtLIs----~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~ 98 (232)
T 2oq5_A 23 SHRCGATLIN----ATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPY 98 (232)
T ss_dssp EEEEEEEEEE----TTEEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCC
T ss_pred CeeEEEEEEc----CCEEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCcc
Confidence 3679999999 67999999987642 3456666631 134566666777875 59999999743 33
Q ss_pred CcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 381 GVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 381 ~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
. ..+.++.|.... .+..|+.+++.|+.
T Consensus 99 ~----~~v~picLp~~~~~~~~~~~~~v~GwG 126 (232)
T 2oq5_A 99 T----NAVHRVCLPDASYEFQPGDVMFVTGFG 126 (232)
T ss_dssp C----SSSCCCBCCCTTCCCCTTCEEEEEESC
T ss_pred C----CceeEeECCCccccCCCCCEEEEEECC
Confidence 2 245556665432 35689999999975
No 451
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=96.31 E-value=0.043 Score=55.60 Aligned_cols=90 Identities=11% Similarity=0.053 Sum_probs=60.8
Q ss_pred cceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeC
Q 004068 314 QHFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYD 376 (775)
Q Consensus 314 ~~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d 376 (775)
....+.|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. .|+||||++
T Consensus 25 ~~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 100 (238)
T 3bg8_A 25 QRHLCGGSIIG----NQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLE 100 (238)
T ss_dssp CEEEEEEEEEE----TTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEES
T ss_pred CcEEEEEEEee----CCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEEC
Confidence 34679999999 67999999987543 2456666421 134566666778875 599999997
Q ss_pred CC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 377 PS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 377 ~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
.. .+. ..+.++.|.... .+..|+.+++.|+.
T Consensus 101 ~~v~~~----~~v~picLp~~~~~~~~~~~~~v~GwG 133 (238)
T 3bg8_A 101 TTVNYT----DSQRPISLPSKGERNVIYTDCWVTGWG 133 (238)
T ss_dssp SCCCCB----TTBCCCBCCCGGGGSSCCCCEEEEESC
T ss_pred CccccC----CCcccCCCCCCccCcCCCCeEEEEecC
Confidence 43 332 245556665432 25678999999975
No 452
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.28 E-value=0.017 Score=60.58 Aligned_cols=89 Identities=17% Similarity=0.117 Sum_probs=62.9
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC-----CCeEEeEEEEEEeCC-------CcEEEEEeCCC-CCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA-----FPIEIPGEVVFLHPV-------HNFALIAYDPS-SLG 381 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d-----~~~~~~A~Vv~~dp~-------~DlAILk~d~~-~l~ 381 (775)
...+.|.+|+ .-+|||.+|.+. +...+.|.+.. ....+..+-+..||. .||||||++.. .+.
T Consensus 76 ~~~CgGtLI~----~~~VLTAAHC~~-~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~ 150 (283)
T 3f1s_B 76 KDFCGGVIIR----ENFVLTTAKCSL-LHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCP 150 (283)
T ss_dssp CEEEEEEEEE----TTEEEECHHHHT-SCSSCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTT
T ss_pred CeeeccEEec----CCEEEEcHHhcC-ccCceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCC
Confidence 3679999999 679999988774 44466777642 145667777788874 59999999643 332
Q ss_pred cccccceeeeeeCCCC----CCCCCCEEEEEEeCC
Q 004068 382 VAGASVVRAAELLPEP----ALRRGDSVYLVGLSR 412 (775)
Q Consensus 382 ~~~~~~v~~~~lg~s~----~l~~Gd~V~aiG~p~ 412 (775)
..+.++.|.... .+..|+.+++.|+..
T Consensus 151 ----~~v~picLp~~~~~~~~~~~~~~~~v~GwG~ 181 (283)
T 3f1s_B 151 ----GAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR 181 (283)
T ss_dssp ----TTCCCCBCCCHHHHHHTTTTTSCEEEEECBC
T ss_pred ----CCEEeEECCCCccccccccCCCEEEEEECCC
Confidence 345666675432 367899999999854
No 453
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=96.25 E-value=0.13 Score=52.53 Aligned_cols=90 Identities=12% Similarity=0.148 Sum_probs=61.7
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEEEEeCCC-------cEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVVFLHPVH-------NFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv~~dp~~-------DlAILk~d~ 377 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||.. |+||||++.
T Consensus 23 ~~~CgGtLI~----~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~ 98 (261)
T 3gyl_B 23 VHVCGGSLVS----EQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSR 98 (261)
T ss_dssp EEEEEEEECS----SSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESS
T ss_pred ceEEEEEEEc----CCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECC
Confidence 3679999999 67999999988532 3456666542 1235666777888864 999999964
Q ss_pred C-CCCcccccceeeeeeCCC-CCCCCCCEEEEEEeCC
Q 004068 378 S-SLGVAGASVVRAAELLPE-PALRRGDSVYLVGLSR 412 (775)
Q Consensus 378 ~-~l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p~ 412 (775)
. .+. ..+.++.|... ..+..|+.+++.|+..
T Consensus 99 ~v~~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 131 (261)
T 3gyl_B 99 PITFS----RYIRPISLPAAQASFPNGLHCTVTGWGH 131 (261)
T ss_dssp CCCCB----TTBCCCBCCCTTCCCCTTCEEEEEESSC
T ss_pred CccCC----CceeccCCCCcccCCCCCCEEEEEecCC
Confidence 3 332 34566666432 2356899999999853
No 454
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=96.24 E-value=0.33 Score=48.82 Aligned_cols=85 Identities=18% Similarity=0.255 Sum_probs=59.4
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC------------------C
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV------------------H 368 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~------------------~ 368 (775)
...+.|.+|+ .-+|||.+|.+.. .+.|.+.. ....+..+-+..||. +
T Consensus 23 ~~~CgGsLIs----~~~VLTAAHC~~~---~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~ 95 (238)
T 1spj_A 23 TFQCGGILVH----RQWVLTAAHCISD---NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSH 95 (238)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCCS---SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTT
T ss_pred CeeEEEEEec----CCEEEEcHHhCCC---CceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCC
Confidence 3679999999 7799999998753 34555431 134566666777765 4
Q ss_pred cEEEEEeCCC-C-CCcccccceeeeeeCCCCCCCCCCEEEEEEeC
Q 004068 369 NFALIAYDPS-S-LGVAGASVVRAAELLPEPALRRGDSVYLVGLS 411 (775)
Q Consensus 369 DlAILk~d~~-~-l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p 411 (775)
|+||||++.. . +. ..+.++.|.... ...|+.+++.|+.
T Consensus 96 DIALl~L~~~~~~~~----~~v~pi~L~~~~-~~~~~~~~v~GwG 135 (238)
T 1spj_A 96 DLMLLRLTEPADTIT----DAVKVVELPTEE-PEVGSTCLASGWG 135 (238)
T ss_dssp CCEEEEESSCCCCSS----TTCCCCCCCSSC-CCTTCEEEEEESS
T ss_pred CeEEEEECccccccC----CceeeccCCCCC-CCCCCEEEEEecC
Confidence 8999999643 2 32 345667776544 6789999999975
No 455
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=96.21 E-value=0.16 Score=51.72 Aligned_cols=89 Identities=18% Similarity=0.306 Sum_probs=61.5
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC---------CeEEeEEEEEEeCC-------CcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF---------PIEIPGEVVFLHPV-------HNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~---------~~~~~A~Vv~~dp~-------~DlAILk~d~~ 378 (775)
...+.|.+|+ .-+|||.+|.+. +...+.|.+... ...+..+-+..||. .|+||||++..
T Consensus 40 ~~~CgGtLIs----~~~VLTAAHC~~-~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~ 114 (251)
T 1pyt_D 40 RHTCGGTLIT----PNHVLTAAHCIS-NTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAET 114 (251)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCC-TTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSC
T ss_pred ceEEEeEEec----CCEEEECHHHhC-CCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCC
Confidence 4679999999 679999998875 455677766321 23456666778875 59999999643
Q ss_pred -CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 379 -SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... .+..|..+++.|+..
T Consensus 115 v~~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 146 (251)
T 1pyt_D 115 VELG----DTIQVACLPSEGSLLPQDYPCFVTGWGR 146 (251)
T ss_dssp CCCC----SSCCCCBCCCTTCCCCTTCEEEECBCCC
T ss_pred cccC----CCeeeeEcCCCcccCCCCCEEEEEeccc
Confidence 332 345666665432 256799999999753
No 456
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=96.17 E-value=0.091 Score=54.87 Aligned_cols=76 Identities=9% Similarity=0.117 Sum_probs=46.4
Q ss_pred hcCcEEEEEEeecCccccCCccccceeEEEEEEEec--CCceEEEEecceecc---CCceEEEEEcCC------------
Q 004068 291 IEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHS--QSMGLVVVDKNTVAI---SASDVMLSFAAF------------ 353 (775)
Q Consensus 291 l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~--~~~GlVLTnr~~V~~---~~~~I~Vt~~d~------------ 353 (775)
.+++|+++.. + +...++|.+|... ...-||||++|.+.. ....+.|.+...
T Consensus 21 ~~~aV~rl~~--------~----g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~~~~ 88 (268)
T 1arb_A 21 IIRAVGAYSK--------S----GTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPAS 88 (268)
T ss_dssp GGGGEEEEEE--------T----TEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGGG
T ss_pred hhceEEEEEe--------C----CccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCcccccccccc
Confidence 4578888742 2 2467999999921 013699999988753 123455555210
Q ss_pred ---------CeEEeEEEEEEeCCCcEEEEEeCCC
Q 004068 354 ---------PIEIPGEVVFLHPVHNFALIAYDPS 378 (775)
Q Consensus 354 ---------~~~~~A~Vv~~dp~~DlAILk~d~~ 378 (775)
-..+...++.-....||||||++..
T Consensus 89 ~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~ 122 (268)
T 1arb_A 89 GANGDGSMSQTQSGSTVKATYATSDFTLLELNNA 122 (268)
T ss_dssp GSCCCCCCCCEEECEEEEEEETTTTEEEEEESSC
T ss_pred ccccCCcceEEeccceEecCCCCCceEEEEecCC
Confidence 0123344445556789999999753
No 457
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=96.16 E-value=0.055 Score=54.09 Aligned_cols=83 Identities=12% Similarity=0.149 Sum_probs=55.9
Q ss_pred eEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC------CCeEEeEEEEEEeCCC-------cEEEEEeCCC-CC
Q 004068 317 FGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA------FPIEIPGEVVFLHPVH-------NFALIAYDPS-SL 380 (775)
Q Consensus 317 ~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d------~~~~~~A~Vv~~dp~~-------DlAILk~d~~-~l 380 (775)
.++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||.. |+||||++.. .+
T Consensus 21 ~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~ 96 (224)
T 3beu_A 21 GCGGALYA----QDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPINQ 96 (224)
T ss_dssp TEEEEEEE----TTEEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCCCS
T ss_pred ceeEEEee----CCEEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCCCC
Confidence 49999999 67999999988643 2346666531 1245666667788764 9999999643 33
Q ss_pred CcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 381 GVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 381 ~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
+ ++.+.... ...+..+.+.|+..
T Consensus 97 ~--------~i~l~~~~-~~~~~~~~v~GwG~ 119 (224)
T 3beu_A 97 P--------TLKIATTT-AYNQGTFTVAGWGA 119 (224)
T ss_dssp C--------CCEECCSS-TTSSSEEEEEESSC
T ss_pred C--------cccccccc-ccCCCEEEEEecCc
Confidence 2 24554443 34566999999753
No 458
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.14 E-value=0.071 Score=56.57 Aligned_cols=89 Identities=17% Similarity=0.117 Sum_probs=62.1
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC-----CCeEEeEEEEEEeCC-------CcEEEEEeCCC-CCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA-----FPIEIPGEVVFLHPV-------HNFALIAYDPS-SLG 381 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d-----~~~~~~A~Vv~~dp~-------~DlAILk~d~~-~l~ 381 (775)
.....|.+|+ .-+|||.+|.+. +...+.|.+.. ....+..+-+..||. .||||||++.. .+.
T Consensus 117 ~~~CgGtLIs----~~~VLTAAHC~~-~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~ 191 (317)
T 3h5c_B 117 KDFCGGVIIR----ENFVLTTAKCSL-LHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCP 191 (317)
T ss_dssp CEEEEEEEEE----TTEEEECHHHHH-SCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTT
T ss_pred ceeeeeEEee----CCEEEEChHhcC-cCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCC
Confidence 3579999999 679999988774 34456676641 135677777788874 59999999643 332
Q ss_pred cccccceeeeeeCCCC----CCCCCCEEEEEEeCC
Q 004068 382 VAGASVVRAAELLPEP----ALRRGDSVYLVGLSR 412 (775)
Q Consensus 382 ~~~~~~v~~~~lg~s~----~l~~Gd~V~aiG~p~ 412 (775)
..+.++.|.... .+..|+.+++.|+..
T Consensus 192 ----~~v~picLp~~~~~~~~~~~~~~~~v~GwG~ 222 (317)
T 3h5c_B 192 ----GAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR 222 (317)
T ss_dssp ----TSCCCCBCCCHHHHHHTTTTTSCEEEEBCCT
T ss_pred ----CCccceeCCCcccccccccCCCeEEEEecCC
Confidence 345566665432 367899999999853
No 459
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=96.14 E-value=0.49 Score=47.85 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=61.5
Q ss_pred eeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcCC--------CeEEeEEEEEEeCC--------CcEEEEEeCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAAF--------PIEIPGEVVFLHPV--------HNFALIAYDP 377 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d~--------~~~~~A~Vv~~dp~--------~DlAILk~d~ 377 (775)
..++|.+|+ .-+|||.+|.+... ...+.|.+... ...+..+-+..||. +|+||||++.
T Consensus 23 ~~CgGsLIs----~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~ 98 (248)
T 2r0l_A 23 SFCAGSLVH----TCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKK 98 (248)
T ss_dssp EEEEEEEEE----TTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECC
T ss_pred ceEEEEEEc----CCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCC
Confidence 579999999 67999999988654 25677776421 24566666666653 5999999975
Q ss_pred CC---CCcccccceeeeeeCCC-CCCCCCCEEEEEEeC
Q 004068 378 SS---LGVAGASVVRAAELLPE-PALRRGDSVYLVGLS 411 (775)
Q Consensus 378 ~~---l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p 411 (775)
.. +.. ...+.++.|... ..+..|+.+++.|+.
T Consensus 99 ~~~~~~~~--~~~v~picLp~~~~~~~~~~~~~v~GwG 134 (248)
T 2r0l_A 99 KGDRCATR--SQFVQPICLPEPGSTFPAGHKCQIAGWG 134 (248)
T ss_dssp SSSCSSCC--BTTBCCCBCCCTTCCCCTTCEEEEEESC
T ss_pred cccccccC--CCcEEEEECCCCCCCCCCCCEEEEEEcc
Confidence 31 211 134666777542 236789999999975
No 460
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=96.08 E-value=0.019 Score=57.83 Aligned_cols=89 Identities=10% Similarity=0.147 Sum_probs=60.5
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC---CceEEEEEcC---------CCeEEeEEEEEEeCC-------CcEEEEEe
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS---ASDVMLSFAA---------FPIEIPGEVVFLHPV-------HNFALIAY 375 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~---~~~I~Vt~~d---------~~~~~~A~Vv~~dp~-------~DlAILk~ 375 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. .|+|||++
T Consensus 23 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L 98 (235)
T 4dgj_A 23 RLLCGASLVS----SDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHL 98 (235)
T ss_dssp EEEEEEEECS----SSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEE
T ss_pred CeEEEEEEee----CCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEE
Confidence 3679999999 67999999987432 3445565531 123455666778876 59999999
Q ss_pred CCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 376 DPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 376 d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
+.. .+. ..+.++.|.... .+..|+.+.+.|+.
T Consensus 99 ~~~~~~~----~~v~picLp~~~~~~~~~~~~~v~GwG 132 (235)
T 4dgj_A 99 EFKVNYT----DYIQPISLPEENQVFPPGRNCSIAGWG 132 (235)
T ss_dssp SSCCCCB----TTBCCCBCCCTTCCCCTTCEEEEEESS
T ss_pred CCccccC----CcccccCCCCcccCCCCCCEEEEEecc
Confidence 743 332 345667775433 25689999999985
No 461
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=96.07 E-value=0.46 Score=48.14 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=62.1
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~ 377 (775)
...+.|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. .|+|||+++.
T Consensus 29 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~ 104 (252)
T 1rtf_B 29 RFLCGGILIS----SCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKS 104 (252)
T ss_dssp EEEEEEEECS----SSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECC
T ss_pred CEEEEEEEEe----CCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECC
Confidence 4679999999 67999999988643 3457777632 134566666778875 5999999964
Q ss_pred CC---CCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 378 SS---LGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 378 ~~---l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
.. +.. ...+.++.|.... .+..|+.+++.|+-
T Consensus 105 ~~~~~~~~--~~~v~picLp~~~~~~~~~~~~~v~GwG 140 (252)
T 1rtf_B 105 DSSRCAQE--SSVVRTVCLPPADLQLPDWTECELSGYG 140 (252)
T ss_dssp SSSCCSCC--BTTBCCCBCCCTTCCCCTTCEEEEEESC
T ss_pred cccccccc--CCceeceeCCCccccCCCCCEEEEEEcC
Confidence 31 111 1345666675432 35679999999975
No 462
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=95.92 E-value=0.043 Score=55.26 Aligned_cols=89 Identities=20% Similarity=0.243 Sum_probs=61.1
Q ss_pred eeEEEEEEEecCCceEEEEecceecc---CCceEEEEEcCC------CeEEeEEEEEEeCC--------CcEEEEEeCCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAI---SASDVMLSFAAF------PIEIPGEVVFLHPV--------HNFALIAYDPS 378 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~---~~~~I~Vt~~d~------~~~~~A~Vv~~dp~--------~DlAILk~d~~ 378 (775)
..++|.+|+ .-+|||.+|.+.. ....+.|.+... ...+..+-+..||. .|+||||++..
T Consensus 22 ~~CgGtLI~----~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~ 97 (242)
T 3tvj_B 22 TTAAGALLY----DNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNK 97 (242)
T ss_dssp EEEEEEEET----TTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEEEESSC
T ss_pred CcEEEEEec----CCEEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEEEECCc
Confidence 568999999 6699999998753 344566665421 24555666777763 59999999743
Q ss_pred -CCCcccccceeeeeeCCCC---CCCCCCEEEEEEeCC
Q 004068 379 -SLGVAGASVVRAAELLPEP---ALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~---~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... .+..|+.+.+.|+..
T Consensus 98 v~~~----~~v~picLp~~~~~~~~~~~~~~~~~GwG~ 131 (242)
T 3tvj_B 98 VVIN----SNITPICLPRKEAESFMRTDDIGTASGWGL 131 (242)
T ss_dssp CCCB----TTBCCCBCCCTTGGGGSCTTCEEEEEESCC
T ss_pred cccC----CCEecCCcCCCcccccccCCCEEEEEEeCC
Confidence 332 355667775543 267899999999853
No 463
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=95.88 E-value=0.075 Score=53.61 Aligned_cols=90 Identities=13% Similarity=0.043 Sum_probs=61.8
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC-CceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS-ASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~-~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~ 378 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. .|+||||++..
T Consensus 25 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~ 100 (238)
T 1ym0_A 25 SHFCGGSIIN----DRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVA 100 (238)
T ss_dssp EEEEEEEEEE----TTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSC
T ss_pred ceEEEEEEee----CCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCC
Confidence 4679999999 67999999987643 3557777642 124566666777874 59999999643
Q ss_pred -CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCC
Q 004068 379 -SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|........|+.+.+.|+..
T Consensus 101 ~~~~----~~v~picLp~~~~~~~~~~~~~~GwG~ 131 (238)
T 1ym0_A 101 ITFD----INVGPICAPDPANDYVYRKSQCSGWGT 131 (238)
T ss_dssp CCCS----SSCCCCBCCCTTCCCTTCEEEEEESCC
T ss_pred cccc----CcccccCCCCCcCCCCCCceEEEeecC
Confidence 332 345666675443223899999999753
No 464
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=95.85 E-value=0.53 Score=48.41 Aligned_cols=92 Identities=13% Similarity=0.167 Sum_probs=61.0
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEEEEeCC---------CcEEEEEe
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVVFLHPV---------HNFALIAY 375 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv~~dp~---------~DlAILk~ 375 (775)
...++|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. .|+|||++
T Consensus 51 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L 126 (276)
T 2jde_A 51 TYVCGGSLMS----PCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKI 126 (276)
T ss_dssp EEEEEEEEEE----TTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEE
T ss_pred ceeeeeEEee----CCEEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEe
Confidence 4579999999 67999999987542 3356666542 134566666777775 49999999
Q ss_pred CCCC---CCcccccceeeeeeCCC-CCCCCCCEEEEEEeCC
Q 004068 376 DPSS---LGVAGASVVRAAELLPE-PALRRGDSVYLVGLSR 412 (775)
Q Consensus 376 d~~~---l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p~ 412 (775)
+... +.. ...+.++.|... ..+..|+.+++.|+..
T Consensus 127 ~~~~~~~~~~--~~~v~picLp~~~~~~~~~~~~~v~GwG~ 165 (276)
T 2jde_A 127 RSKEGRCAQP--SRTIQTICLPSMYNDPQFGTSCEITGFGK 165 (276)
T ss_dssp ECTTSCCCCC--BTTBCCCBCCBTTBCCCTTCEEEEEESCC
T ss_pred CCcccccccc--CCceEccCCCCcccCCCCCCEEEEEECCc
Confidence 6431 111 134556666432 2367899999999853
No 465
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=95.71 E-value=0.34 Score=49.19 Aligned_cols=87 Identities=16% Similarity=0.189 Sum_probs=59.1
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEc--------CCCeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFA--------AFPIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~--------d~~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+.... ..|.+. +....+..+-+..||. .|+||||++..
T Consensus 39 ~~~CgGtLI~----~~~VLTAAHC~~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~ 112 (245)
T 1t8o_A 39 FHFCGGSLIN----ENWVVTAAHCGVTTS--DVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAA 112 (245)
T ss_dssp CEEEEEEEEE----TTEEEECGGGCCCTT--SEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCC
T ss_pred CeEEEEEEee----CCEEEEcHHhCcCCC--cEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCC
Confidence 3579999999 679999999876532 334432 1134566666777765 59999999643
Q ss_pred CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 379 SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
.+. ..+.++.|.... .+..|+.+++.|+.
T Consensus 113 ~~~----~~v~picLp~~~~~~~~~~~~~v~GwG 142 (245)
T 1t8o_A 113 SFS----QTVSAVCLPSASDDFAAGTTCVTTGWG 142 (245)
T ss_dssp CCB----TTBCCCBCCCTTCCCCTTCEEEEEESC
T ss_pred cCC----CceeeeECCCCccCCCCCCEEEEEEeC
Confidence 332 345666665432 36789999999985
No 466
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=95.68 E-value=0.33 Score=49.38 Aligned_cols=89 Identities=15% Similarity=0.291 Sum_probs=60.6
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------CeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------PIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...+.|.+|+ .-+|||.+|.+. +...+.|.+... ...+..+-+..||. .|+||||++..
T Consensus 24 ~~~CgGsLI~----~~~VLTAAHC~~-~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v 98 (250)
T 1aut_C 24 KLACGAVLIH----PSWVLTAAHCMD-ESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPA 98 (250)
T ss_dssp CEEEEEEEEE----TTEEEECGGGSS-SCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCC
T ss_pred ceEEEEEEee----CCEEEEChHHcC-CCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcc
Confidence 4679999999 679999998875 344566766421 24566666778875 59999999643
Q ss_pred CCCcccccceeeeeeCCCC-----CCCCCCEEEEEEeCC
Q 004068 379 SLGVAGASVVRAAELLPEP-----ALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-----~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... ....|+.+++.|+..
T Consensus 99 ~~~----~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~ 133 (250)
T 1aut_C 99 TLS----QTIVPICLPDSGLAERELNQAGQETLVTGWGY 133 (250)
T ss_dssp CCB----TTBCCCBCCCHHHHHHTTTSTTCEEEEEECCC
T ss_pred cCC----CceeeeEcCCCccccccccCCCCEEEEEEeCC
Confidence 332 245556664321 136799999999853
No 467
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=95.59 E-value=0.1 Score=47.80 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=59.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...+.|.+|+ .-+|||.+|++.. .++.|.+.. ....+..+-+..||. .|+||||++..
T Consensus 24 ~~~CgGsLIs----~~~VLTAAHC~~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~ 97 (131)
T 1yph_C 24 FHFCGGSLIN----ENWVVTAAHCGVT--TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAA 97 (131)
T ss_dssp CEEEEEEEEE----TTEEEECGGGCCC--TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCC
T ss_pred CEEEEEEEee----CCEEEECHHHCCC--CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcc
Confidence 3579999999 6799999998754 234454421 134566666677765 59999999743
Q ss_pred CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 379 SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
.+. ..+.++.|.... .+..|+.+++.|+-
T Consensus 98 ~~~----~~v~picLp~~~~~~~~g~~~~v~GWG 127 (131)
T 1yph_C 98 SFS----QTVSAVCLPSASDDFAAGTTCVTTGWG 127 (131)
T ss_dssp CCB----TTBCCCBCCCTTCCCCTTCEEEEEESC
T ss_pred cCC----CcCcceECCCcccCCCCCCEEEEEcCC
Confidence 332 356667775433 25689999999974
No 468
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=95.56 E-value=0.83 Score=47.34 Aligned_cols=90 Identities=16% Similarity=0.176 Sum_probs=61.2
Q ss_pred eeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEEEEeCC--------CcEEEEEeCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVVFLHPV--------HNFALIAYDP 377 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv~~dp~--------~DlAILk~d~ 377 (775)
..+.|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||. +|+|||+++.
T Consensus 58 ~~CgGsLIs----~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~ 133 (283)
T 1yc0_A 58 SFCAGSLVH----TCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKK 133 (283)
T ss_dssp EEEEEEEEE----TTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECC
T ss_pred cEEEEEEee----CCEEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCC
Confidence 579999999 67999999988654 2567777642 124555666666654 5999999975
Q ss_pred CC---CCcccccceeeeeeCCC-CCCCCCCEEEEEEeC
Q 004068 378 SS---LGVAGASVVRAAELLPE-PALRRGDSVYLVGLS 411 (775)
Q Consensus 378 ~~---l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p 411 (775)
.. +.. ...+.++.|... ..+..|+.+++.|+.
T Consensus 134 ~~~~~v~~--~~~v~picLp~~~~~~~~g~~~~v~GwG 169 (283)
T 1yc0_A 134 KGDRCATR--SQFVQPICLPEPGSTFPAGHKCQIAGWG 169 (283)
T ss_dssp BTTBSSCC--BTTBCCCBCCCTTCCCCTTCEEEEEESS
T ss_pred Cccccccc--cCceeeeECCCCcCCCCCCCEEEEEEeC
Confidence 31 211 134666777542 236789999999975
No 469
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=95.32 E-value=0.042 Score=55.72 Aligned_cols=89 Identities=26% Similarity=0.438 Sum_probs=57.2
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--C--------eEEeEEEEEEeCC---------CcEEEEEe
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--P--------IEIPGEVVFLHPV---------HNFALIAY 375 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--~--------~~~~A~Vv~~dp~---------~DlAILk~ 375 (775)
...++|.+|+ .-+|||.+|.+.. ...+.|.+... . ..+..+-+..||. .|+|||++
T Consensus 25 ~~~CgGtLIs----~~~VLTAAhC~~~-~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L 99 (240)
T 1fon_A 25 HHTCGGSLIA----PDWVVTAGHCIST-SRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKL 99 (240)
T ss_dssp EEEECCEEEE----TTEEEECGGGCCT-TSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEEC
T ss_pred eeEEEEEEee----CCEEEECHHHCCC-CCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEe
Confidence 3679999999 6799999988754 34555655320 1 1112222456764 79999999
Q ss_pred CCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 376 DPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 376 d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
+.. .+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 100 ~~~v~~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (240)
T 1fon_A 100 SRSAQLG----DKVQLANLPPAGDILPNEAPCYISGWGR 134 (240)
T ss_dssp SSCCCCT----TSCCCCBCCCTTCCCCTTCCCEEEECTT
T ss_pred cCccccC----CcccccCCCCcccCCCCCCeEEEEEEeE
Confidence 743 332 345566665432 367899999999753
No 470
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=95.19 E-value=0.27 Score=49.36 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=56.0
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCC-----ceEEEEEcCC-----CeEEeEEEEEEeC--------CCcEEEEEeC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISA-----SDVMLSFAAF-----PIEIPGEVVFLHP--------VHNFALIAYD 376 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~-----~~I~Vt~~d~-----~~~~~A~Vv~~dp--------~~DlAILk~d 376 (775)
...++|.+|+. ...-+|||.+|++.... ..+.+..... ...+..+-+..|| ..|+||||++
T Consensus 20 ~~~CgGslI~s-~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~DiAll~L~ 98 (218)
T 3cp7_A 20 DFVCSANIVAS-ANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLE 98 (218)
T ss_dssp EEEEEEEEBCC-TTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEEEECHHHHHHCCGGGCCEEEEEC
T ss_pred CeEEEEEEEec-CCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEEEECcccccCCCCcCCEEEEEEe
Confidence 46799999972 23569999999875321 3454443211 1134555555553 3599999997
Q ss_pred CC---CCCccccccee-eeeeCCCCCCCCCCEEEEEEeCCC
Q 004068 377 PS---SLGVAGASVVR-AAELLPEPALRRGDSVYLVGLSRS 413 (775)
Q Consensus 377 ~~---~l~~~~~~~v~-~~~lg~s~~l~~Gd~V~aiG~p~g 413 (775)
.. .+. ..+. ++.|.... ..|+.+.+.|++..
T Consensus 99 ~~~~~~~~----~~v~~~~~l~~~~--~~g~~~~v~GwG~~ 133 (218)
T 3cp7_A 99 TKGGTTVQ----QQVGTASPIAFNQ--PRGQYYSAYGYPAA 133 (218)
T ss_dssp CBTTBCHH----HHHSCCBCBCCSC--CSSCEEEEEECCCS
T ss_pred CCCCcChh----HhcCcccceeecC--CCCCEEEEEeCCCC
Confidence 54 221 1233 34554322 47999999999863
No 471
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=95.17 E-value=0.079 Score=53.66 Aligned_cols=88 Identities=16% Similarity=0.112 Sum_probs=60.6
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...++|.+|+ .-+|||.+|.+.. ...+.|.+.. ....+..+-+..||. .|+|||+++..
T Consensus 24 ~~~CgGtLIs----~~~VLTAAhC~~~-~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v 98 (241)
T 2jkh_A 24 EGFCGGTILS----EFYILTAAHCLYQ-AKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPI 98 (241)
T ss_dssp CEEEEEEECS----SSEEEECGGGGGS-CSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCC
T ss_pred CcEEEEEEee----CCEEEEcHHHcCC-CCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcc
Confidence 4679999999 6799999988753 3456666642 124567777788875 59999999643
Q ss_pred CCCcccccceeeeeeCCCC----CCCCCCEEEEEEeC
Q 004068 379 SLGVAGASVVRAAELLPEP----ALRRGDSVYLVGLS 411 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s~----~l~~Gd~V~aiG~p 411 (775)
.+. ..+.++.|.... .+..|+.+++.|+.
T Consensus 99 ~~~----~~v~picLp~~~~~~~~~~~~~~~~v~GwG 131 (241)
T 2jkh_A 99 TFR----MNVAPACLPERDWAESTLMTQKTGIVSGFG 131 (241)
T ss_dssp CCB----TTBCCCBCCCHHHHHHHTTTSSEEEEEESC
T ss_pred cCC----CCEeeeEcCCCCcccccccCCCeEEEEecC
Confidence 332 345566664422 14678999999974
No 472
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=95.17 E-value=0.1 Score=53.20 Aligned_cols=89 Identities=15% Similarity=0.093 Sum_probs=60.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCC--ceEEEEEcCC--------CeEEeEEEEEEeCC-------CcEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISA--SDVMLSFAAF--------PIEIPGEVVFLHPV-------HNFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~--~~I~Vt~~d~--------~~~~~A~Vv~~dp~-------~DlAILk~d~ 377 (775)
...++|.+|+ .-+|||.+|.+.... ..+.|.+... ...+..+-+..||. .|+||||++.
T Consensus 23 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~ 98 (254)
T 2bz6_H 23 AQLCGGTLIN----TIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQ 98 (254)
T ss_dssp EEEEEEEECS----SSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESS
T ss_pred CcEEEEEEec----CCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECC
Confidence 3679999999 679999999875432 3477766421 34566666777875 5999999964
Q ss_pred C-CCCcccccceeeeeeCCCC----CCCCCCEEEEEEeC
Q 004068 378 S-SLGVAGASVVRAAELLPEP----ALRRGDSVYLVGLS 411 (775)
Q Consensus 378 ~-~l~~~~~~~v~~~~lg~s~----~l~~Gd~V~aiG~p 411 (775)
. .+. ..+.++.|.... .+..|+.+++.|+.
T Consensus 99 ~v~~~----~~v~picLp~~~~~~~~~~~~~~~~v~GwG 133 (254)
T 2bz6_H 99 PVVLT----DHVVPLCLPERTFSERTLAFVRFSLVSGWG 133 (254)
T ss_dssp CCCCB----TTBCCCBCCCHHHHHHTGGGCCEEEEEESC
T ss_pred ccccC----CCccceECCCCccccccccCCCcEEEEeCc
Confidence 3 332 345566664322 24578999999974
No 473
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=94.93 E-value=0.2 Score=50.70 Aligned_cols=89 Identities=15% Similarity=0.234 Sum_probs=62.4
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------CeEEeEEEEEEeCC---------CcEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------PIEIPGEVVFLHPV---------HNFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~~~~~A~Vv~~dp~---------~DlAILk~d~ 377 (775)
...+.|.+|+ .-+|||.+|.+. ....+.|.+... ...+..+-+..||. .|+||||++.
T Consensus 27 ~~~CgGtLI~----~~~VLTAAHC~~-~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~ 101 (241)
T 1bru_P 27 RHTCGGTLVD----QSWVLTAAHCIS-SSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLAS 101 (241)
T ss_dssp EEEEEEEEEE----TTEEEECGGGCC-TTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESS
T ss_pred eeEEEeEEee----CCEEEEcHHhcc-cCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCC
Confidence 3679999999 679999999886 445677776421 24566666778874 6999999964
Q ss_pred C-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 378 S-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 378 ~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
. .+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 102 ~v~~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (241)
T 1bru_P 102 PVSLT----DKIQLGCLPAAGTILPNNYVCYVTGWGR 134 (241)
T ss_dssp CCCCC----SSCCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CcccC----CccCCcccCCCcCCCCCCCEEEEEEccc
Confidence 3 332 345566665432 357899999999753
No 474
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=94.81 E-value=0.54 Score=47.59 Aligned_cols=90 Identities=13% Similarity=0.222 Sum_probs=58.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceecc-------CCceEEEEEcCC---------CeEEeEEEEEEeCC--------CcE
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAI-------SASDVMLSFAAF---------PIEIPGEVVFLHPV--------HNF 370 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~-------~~~~I~Vt~~d~---------~~~~~A~Vv~~dp~--------~Dl 370 (775)
...++|.+|+ .-+|||.+|++.. ....+.|.+... ......+-+..||. .|+
T Consensus 25 ~~~CgGtLI~----~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DI 100 (259)
T 3rm2_H 25 ELLCGASLIS----DRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDI 100 (259)
T ss_dssp EEEEEEEECS----SSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCC
T ss_pred ceEEEEEEEe----CCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcE
Confidence 3579999999 6799999998742 234566766421 12233555667764 399
Q ss_pred EEEEeCCC-CCCcccccceeeeeeCCCC----CCCCCCEEEEEEeCC
Q 004068 371 ALIAYDPS-SLGVAGASVVRAAELLPEP----ALRRGDSVYLVGLSR 412 (775)
Q Consensus 371 AILk~d~~-~l~~~~~~~v~~~~lg~s~----~l~~Gd~V~aiG~p~ 412 (775)
|||+++.. .+. ..+.++.|.... .+..|..+.+.|+..
T Consensus 101 ALl~L~~~v~~~----~~v~picLp~~~~~~~~~~~g~~~~v~GwG~ 143 (259)
T 3rm2_H 101 ALMKLKKPVAFS----DYIHPVCLPDRETAASLLQAGYKGRVTGWGN 143 (259)
T ss_dssp EEEEESSCCCCB----TTBCCCBCCCHHHHHHHCCTTCEEEEEESCC
T ss_pred EEEEeCCceEcC----CCcccccCCCccccccccCCCCEEEEeecCC
Confidence 99999643 332 345566664322 136799999999854
No 475
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=94.48 E-value=0.18 Score=50.87 Aligned_cols=88 Identities=25% Similarity=0.353 Sum_probs=62.0
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------CeEEeEEEEEEeC---------CCcEEEEEeCCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------PIEIPGEVVFLHP---------VHNFALIAYDPS 378 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~~~~~A~Vv~~dp---------~~DlAILk~d~~ 378 (775)
..++|.+|+ .-+|||.+|.+. +...+.|.+... ...+..+-+..|| ..|+||||++..
T Consensus 28 ~~CgGtLIs----~~~VLTAAHC~~-~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~ 102 (236)
T 1elt_A 28 HTCGGSLIR----QGWVMTAAHCVD-SARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQ 102 (236)
T ss_dssp EEEEEEEEE----TTEEEECHHHHS-SCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSC
T ss_pred eEEEEEEEe----CCEEEECHHhhC-CcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCC
Confidence 579999999 679999988875 345677776421 2456677777887 569999999643
Q ss_pred -CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 379 -SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|.... .+..|+.++++|+..
T Consensus 103 ~~~~----~~v~picL~~~~~~~~~~~~~~v~GwG~ 134 (236)
T 1elt_A 103 ASLN----SAVQLAALPPSNQILPNNNPCYITGWGK 134 (236)
T ss_dssp CCCS----SSCCCCCCCCTTCCCCTTCCEEEEESCC
T ss_pred CccC----CcEEeccCCCccccCCCCCEEEEEeCCC
Confidence 332 345566665433 257899999999864
No 476
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=94.23 E-value=0.32 Score=49.16 Aligned_cols=89 Identities=18% Similarity=0.206 Sum_probs=61.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC--------CeEEeEEEEEEeC---------CCcEEEEEeCC
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF--------PIEIPGEVVFLHP---------VHNFALIAYDP 377 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~--------~~~~~A~Vv~~dp---------~~DlAILk~d~ 377 (775)
...+.|.+|+ .-+|||.+|.+.. ...+.|.+... ...+..+-+..|| ..|+||||++.
T Consensus 27 ~~~CgGsLI~----~~~VLTAAHC~~~-~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~ 101 (240)
T 1gvk_B 27 AHTCGGTLIR----QNWVMTAAHCVDR-ELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQ 101 (240)
T ss_dssp EEEEEEEEEE----TTEEEECGGGGCS-CCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESS
T ss_pred CceEEEEEee----CCEEEECHHHCCC-CcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECC
Confidence 3679999999 6799999988753 35667766321 2456666677887 56999999964
Q ss_pred C-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 378 S-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 378 ~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
. .+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 102 ~v~~~----~~v~pi~lp~~~~~~~~~~~~~v~GwG~ 134 (240)
T 1gvk_B 102 SVTLN----SYVQLGVLPRAGTILANNSPCYITGWGL 134 (240)
T ss_dssp CCCCB----TTBCCCCCCCTTCCCCTTCCEEEEESCB
T ss_pred ccccC----CCccceecCCCCCCCCCCCEEEEEecCc
Confidence 3 332 245556665432 357899999999753
No 477
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=93.22 E-value=0.52 Score=47.66 Aligned_cols=89 Identities=18% Similarity=0.306 Sum_probs=61.2
Q ss_pred ceeEEEEEEEecCCceEEEEecceecc---CCceEEEEEcCC-----CeEEeEEEEEEeCC-------CcEEEEEeCCC-
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAI---SASDVMLSFAAF-----PIEIPGEVVFLHPV-------HNFALIAYDPS- 378 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~---~~~~I~Vt~~d~-----~~~~~A~Vv~~dp~-------~DlAILk~d~~- 378 (775)
...+.|.+|+ .-+|||.+|.+.. ....+.|.+... +..+..+-+..||. .|+||||++..
T Consensus 26 ~~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v 101 (245)
T 2f9n_A 26 MHFCGGSLIH----PQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPV 101 (245)
T ss_dssp EEEEEEEEEE----TTEEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCC
T ss_pred ceEEEEEEee----CCEEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCC
Confidence 4579999999 6799999998843 234566765421 23556666778875 49999999643
Q ss_pred CCCcccccceeeeeeCCC-CCCCCCCEEEEEEeC
Q 004068 379 SLGVAGASVVRAAELLPE-PALRRGDSVYLVGLS 411 (775)
Q Consensus 379 ~l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p 411 (775)
.+. ..+.++.|... ..+..|+.+++.|+-
T Consensus 102 ~~~----~~v~picLp~~~~~~~~~~~~~v~GwG 131 (245)
T 2f9n_A 102 NIS----SRVHTVMLPPASETFPPGMPCWVTGWG 131 (245)
T ss_dssp CCC----SSSCCCBCCCTTCCCCTTCCEEEEESC
T ss_pred cCC----CCccccCCCCcccCCCCCCEEEEEEeC
Confidence 332 24555666543 236789999999975
No 478
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=93.15 E-value=0.55 Score=47.63 Aligned_cols=90 Identities=20% Similarity=0.265 Sum_probs=60.5
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcCC--------CeEEeEEEEEEeCC-CcEEEEEeCCC-CCCc
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAAF--------PIEIPGEVVFLHPV-HNFALIAYDPS-SLGV 382 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d~--------~~~~~A~Vv~~dp~-~DlAILk~d~~-~l~~ 382 (775)
...+.|.+|+ .-+|||.+|.+... ...+.|.+... ...+..+-++.||. .|+||||++.. .+.
T Consensus 41 ~~~CgGsLIs----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~- 115 (247)
T 1ddj_A 41 MHFCGGTLIS----PEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVIT- 115 (247)
T ss_dssp CEEEEEEEEE----TTEEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCC-
T ss_pred CeEEEEEEee----CCEEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeC-
Confidence 3579999999 77999999988643 24556665321 23455555667774 79999999643 332
Q ss_pred ccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 383 AGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 383 ~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
..+.++.|.... .+..|+.+++.|+..
T Consensus 116 ---~~v~picLp~~~~~~~~~~~~~v~GwG~ 143 (247)
T 1ddj_A 116 ---DKVIPACLPSPNYVVADRTECFITGWGE 143 (247)
T ss_dssp ---SSCCCCBCCCTTCCCCTTCEEEEEECCC
T ss_pred ---CCEEeeecCCcccCCCCCCEEEEEEccc
Confidence 245556665432 357799999999753
No 479
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=92.80 E-value=2.4 Score=50.74 Aligned_cols=90 Identities=20% Similarity=0.265 Sum_probs=60.9
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEEEEeCC-CcEEEEEeCCC-CCCc
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVVFLHPV-HNFALIAYDPS-SLGV 382 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv~~dp~-~DlAILk~d~~-~l~~ 382 (775)
.....|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-++.||. .||||||++.. .+.
T Consensus 585 ~~~CGGSLIs----~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~~s- 659 (791)
T 4dur_A 585 MHFCGGTLIS----PEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVIT- 659 (791)
T ss_dssp CEEEEEEEEE----TTEEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCCCC-
T ss_pred CeEEEEEEEe----CCEEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccccC-
Confidence 4579999999 67999999988543 2445666532 123556666677776 69999999643 332
Q ss_pred ccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 383 AGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 383 ~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
..|.++.|.... .+..|..+++.|+-.
T Consensus 660 ---~~V~PIcLP~~~~~~~~g~~~~vsGWG~ 687 (791)
T 4dur_A 660 ---DKVIPACLPSPNYVVADRTECFITGWGE 687 (791)
T ss_dssp ---SSCCCCBCCCTTCCCCTTCEEEEEECCC
T ss_pred ---CceeeeeccCcccccCCCCEEEEEEeCC
Confidence 345566664332 357799999999753
No 480
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=92.46 E-value=0.69 Score=47.71 Aligned_cols=90 Identities=23% Similarity=0.324 Sum_probs=60.4
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC-----CceEEEEEcC-------------------CCeEEeEEEEEEeCC---
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS-----ASDVMLSFAA-------------------FPIEIPGEVVFLHPV--- 367 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~-----~~~I~Vt~~d-------------------~~~~~~A~Vv~~dp~--- 367 (775)
...+.|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+..||.
T Consensus 50 ~~~CgGsLIs----~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~ 125 (278)
T 2olg_A 50 QFACGGSLIN----NRYIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVD 125 (278)
T ss_dssp EEEEEEEECS----SSEEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCT
T ss_pred ceeEEEEEEe----CCEEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcC
Confidence 4679999999 67999999987532 2345565531 134455666677763
Q ss_pred ------CcEEEEEeCCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 368 ------HNFALIAYDPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 368 ------~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
+|+||||++.. .+. ..+.++.|.... .+..|+.+++.|+..
T Consensus 126 ~~~~~~nDIALl~L~~~v~~~----~~v~picLp~~~~~~~~g~~~~v~GWG~ 174 (278)
T 2olg_A 126 GSKDRYHDIALIRLNRQVEFT----NYIRPVCLPQPNEEVQVGQRLTVVGWGR 174 (278)
T ss_dssp TCSSCTTCCEEEEESSCCCCC----SSCCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CCCCCCCeEEEEEECCCCcCC----CCcCccCcCCCCCCcCCCCEEEEEcCCc
Confidence 69999999743 332 345666675432 367899999999753
No 481
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=92.38 E-value=1.1 Score=45.00 Aligned_cols=159 Identities=7% Similarity=0.047 Sum_probs=79.1
Q ss_pred eEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEE---eEEEE----EEeCC---CcEEEEEeCCCCCCccccc
Q 004068 317 FGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEI---PGEVV----FLHPV---HNFALIAYDPSSLGVAGAS 386 (775)
Q Consensus 317 ~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~---~A~Vv----~~dp~---~DlAILk~d~~~l~~~~~~ 386 (775)
.-+|+-|. ++ ..|..+|..+.....|. +. +..+ ...+. .+|.. .|+++++++...- ..
T Consensus 31 ~~~~LgI~---~r-~~l~P~H~~~~~~~~i~--i~--g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~k----fr 98 (209)
T 2bhg_A 31 ICCATGVF---GT-AYLVPRHLFAEKYDKIM--LD--GRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNK----VR 98 (209)
T ss_dssp EEEEEEEE---BT-EEEEEHHHHTSCCSEEE--ET--TEEECGGGEEEECCEECCSSSCEECSEEEEEESSSCC----BC
T ss_pred EEEEeeEc---CC-EEEEEcccCCCCCcEEE--Ec--CEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCcc----cC
Confidence 45667777 24 44556577655434443 33 3333 22332 33444 7999999975411 12
Q ss_pred ceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccc-cCCCCcccccccceEEEEEeecc-CCCCCceEEc
Q 004068 387 VVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALN-ISSADCPRYRAMNMEVIELDTDF-GSTFSGVLTD 464 (775)
Q Consensus 387 ~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~-~~~~~~pryra~n~e~I~~Da~i-~~~~GGpL~d 464 (775)
++. -.|.+...+..++.+..+-++.........|.+......+. ......|| ++.=+++. .+.|||+|+-
T Consensus 99 di~-k~f~~~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~-------~~~Y~~pT~~G~CGs~lv~ 170 (209)
T 2bhg_A 99 DIT-KHFRDTARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVSMDGDTMPG-------LFAYKAATRAGYAGGAVLA 170 (209)
T ss_dssp CCG-GGBCSSCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC-----CCTT-------EEEEECCCCTTCTTCEEEE
T ss_pred chh-hhcccccccCCCCeEEEEeccCccCceeeeeeEEEccceeeecCCCcccc-------EEEEcCCCCCCcCCCEEEE
Confidence 222 12322221245666777777764534344555543221121 11111222 33445543 4457999854
Q ss_pred ---cCceEEEEeeeecccccccCCCCCCceeeeccccchhhhHH
Q 004068 465 ---EHGRVQAIWGSFSTQVKFGCSSSEDHQFVRGIPIYTISRVL 505 (775)
Q Consensus 465 ---~~G~VvGI~~~~~~~~~~~~~~~~~~~f~~aIPi~~i~~vl 505 (775)
..|+++||+.+..+ +.+|.-.|+=+++..+.
T Consensus 171 ~~~~~~kIvGIHvaG~g----------~~G~aa~l~r~~~~~~~ 204 (209)
T 2bhg_A 171 KDGADTFIVGTHSAGGN----------GVGYCSCVSRSMLQKMK 204 (209)
T ss_dssp EETTEEEEEEEEEEEET----------TEEEEEECCHHHHHHHH
T ss_pred ecCCCceEEEEEEccCC----------CceEEEEcCHHHHHHHH
Confidence 47999999987533 24564445544554443
No 482
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=91.38 E-value=0.86 Score=50.06 Aligned_cols=90 Identities=13% Similarity=0.179 Sum_probs=62.2
Q ss_pred cceeEEEEEEEecCCceEEEEecceeccCC---ceEEEEEcCC----------CeEEeEEEEEEeCC-------CcEEEE
Q 004068 314 QHFFGTGVIIYHSQSMGLVVVDKNTVAISA---SDVMLSFAAF----------PIEIPGEVVFLHPV-------HNFALI 373 (775)
Q Consensus 314 ~~~~GSGvVId~~~~~GlVLTnr~~V~~~~---~~I~Vt~~d~----------~~~~~A~Vv~~dp~-------~DlAIL 373 (775)
....+.|.+|+ .-+|||.+|.+.... ..+.|.+... ...+..+-+..||. +|||||
T Consensus 160 ~~~~CGGsLIs----~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL 235 (394)
T 2b9l_A 160 EQLVCGGSLIA----PSVVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALL 235 (394)
T ss_dssp CSEEEEEEEEE----TTEEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEE
T ss_pred cceEeeEEEEe----CCEEEeccceecCCCCCcccEEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEE
Confidence 34679999999 779999999875432 4577776421 13456666778875 599999
Q ss_pred EeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeC
Q 004068 374 AYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLS 411 (775)
Q Consensus 374 k~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p 411 (775)
+++.. .+. ..+.++.|........|..+++.|+-
T Consensus 236 ~L~~pv~~~----~~v~PicLp~~~~~~~~~~~~v~GWG 270 (394)
T 2b9l_A 236 LLDRPLVQA----DNIGTICLPQQSQIFDSTECFASGWG 270 (394)
T ss_dssp EESSCCBCC----TTCCCCBCCCTTCCCCCSCEEEEECC
T ss_pred EecCccccC----CceeeeEcCCcccCccCCEEEEEecc
Confidence 99743 222 35666777654434568889999975
No 483
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=91.18 E-value=0.91 Score=49.29 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=61.3
Q ss_pred ceeEEEEEEEecCCceEEEEecceecc---CCceEEEEEcC------CCeEEeEEEEEEeCCC-------------cEEE
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAI---SASDVMLSFAA------FPIEIPGEVVFLHPVH-------------NFAL 372 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~---~~~~I~Vt~~d------~~~~~~A~Vv~~dp~~-------------DlAI 372 (775)
...+.|.+|+ .-+|||.+|.+.. ....+.|.+.. .+..+..+-+..||.. ||||
T Consensus 140 ~~~CgGsLIs----~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIAL 215 (372)
T 1z8g_A 140 AHLCGGSLLS----GDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIAL 215 (372)
T ss_dssp EEEEEEEESS----SSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEE
T ss_pred ceEEEEEEec----CCEEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEE
Confidence 3578999999 7799999998842 23456666532 1345667777788754 9999
Q ss_pred EEeCCC-CCCcccccceeeeeeCCC-CCCCCCCEEEEEEeC
Q 004068 373 IAYDPS-SLGVAGASVVRAAELLPE-PALRRGDSVYLVGLS 411 (775)
Q Consensus 373 Lk~d~~-~l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p 411 (775)
||++.. .+. ..+.++.|... ..+..|+.+++.|+.
T Consensus 216 lkL~~pv~~~----~~v~PicLp~~~~~~~~g~~~~v~GWG 252 (372)
T 1z8g_A 216 VHLSSPLPLT----EYIQPVCLPAAGQALVDGKICTVTGWG 252 (372)
T ss_dssp EEESSCCCCC----SSCCCCBCCCTTCCCCTTCEEEEEESS
T ss_pred EEECCCCCCC----CceeccccCCcccCCCCCCEEEEEecC
Confidence 999643 332 34566666543 236789999999975
No 484
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=91.14 E-value=0.36 Score=48.65 Aligned_cols=89 Identities=19% Similarity=0.173 Sum_probs=57.8
Q ss_pred eeEEEEEEEecCCceEEEEecceecc------CCceEEEEEcCCC-------eEEeEEEEEEeCC----------CcEEE
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAI------SASDVMLSFAAFP-------IEIPGEVVFLHPV----------HNFAL 372 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~------~~~~I~Vt~~d~~-------~~~~A~Vv~~dp~----------~DlAI 372 (775)
..+.|.+|+ .-+|||.+|.+.. ....+.|.+.... ..++.+-+..||. .|+||
T Consensus 22 ~~CgGtLIs----~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIAL 97 (242)
T 2qy0_B 22 GRGGGALLG----DRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIAL 97 (242)
T ss_dssp SEEEEEEET----TTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEE
T ss_pred CCEEEEEEe----CCEEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEE
Confidence 358999999 6799999998753 2334566664311 2345566677765 39999
Q ss_pred EEeCCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeCC
Q 004068 373 IAYDPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLSR 412 (775)
Q Consensus 373 Lk~d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p~ 412 (775)
||++.. .+. ..+.++.|.... .+..|..+++.|+..
T Consensus 98 l~L~~~v~~~----~~v~picLp~~~~~~~~~~~~~v~GwG~ 135 (242)
T 2qy0_B 98 LELENSVTLG----PNLLPICLPDNDTFYDLGLMGYVSGFGV 135 (242)
T ss_dssp EEESSCCCCB----TTBCCCBCCCSGGGGCTTCEEEEEECCC
T ss_pred EEECCCCcCC----CCcceeecCCCccccCCCCeEEEEeecc
Confidence 999743 332 345666665433 246799999999753
No 485
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=90.66 E-value=1.6 Score=45.38 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=59.1
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcCC-------------CeEEeEEEEEEeCC-------CcEEE
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAAF-------------PIEIPGEVVFLHPV-------HNFAL 372 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d~-------------~~~~~A~Vv~~dp~-------~DlAI 372 (775)
...+.|.+|+ .-+|||.+|++... ..++.|.+... ...+..+-+..||. .||||
T Consensus 29 ~~~CgGsLIs----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIAL 104 (290)
T 1fiw_A 29 YHVCGGSLLN----SQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIAL 104 (290)
T ss_dssp EEEEEEEEEE----TTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEE
T ss_pred ceEEEEEEee----CCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEE
Confidence 4579999999 77999999987543 24566665310 23455566677775 59999
Q ss_pred EEeCCC-CCCcccccceeeeeeCCCC--CCCCCCEEEEEEeC
Q 004068 373 IAYDPS-SLGVAGASVVRAAELLPEP--ALRRGDSVYLVGLS 411 (775)
Q Consensus 373 Lk~d~~-~l~~~~~~~v~~~~lg~s~--~l~~Gd~V~aiG~p 411 (775)
||++.. .+. ..+.++.|.... ....|+.+++.|+-
T Consensus 105 l~L~~~v~~~----~~v~PicLp~~~~~~~~~~~~~~v~GWG 142 (290)
T 1fiw_A 105 MKITPPVTCG----HFIGPGCLPQFRAGPPRVPQTCWVAGWG 142 (290)
T ss_dssp EEEESCCCCB----TTBCCCBCCCTTCCSCCSSCEEEEEESC
T ss_pred EEECCccccC----CccccccCCCccccCcCCCCeEEEEEec
Confidence 999643 332 345666665322 13569999999975
No 486
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=90.47 E-value=11 Score=37.07 Aligned_cols=152 Identities=14% Similarity=0.094 Sum_probs=83.5
Q ss_pred hhhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEE--EE
Q 004068 285 SFAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGE--VV 362 (775)
Q Consensus 285 ~~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~--Vv 362 (775)
+++.+-+++-++.|++.. + .=||+-|. +.+.|.++|..+.+ .|.+. +++++.. ..
T Consensus 9 ~f~~~l~~~N~~~vtt~~-----------g--~ft~LgI~----dr~~vvP~Ha~~~~----~i~i~--g~~~~v~d~~~ 65 (187)
T 3qzr_A 9 DFALSLLRRNVRQVQTDQ-----------G--HFTMLGVR----DRLAVLPRHSQPGK----TIWIE--HKLVNVLDAVE 65 (187)
T ss_dssp HHHHHHHHHHEEEEEETT-----------E--EEEEEEEE----BTEEEEEGGGCCCS----EEEET--TEEEEEEEEEE
T ss_pred HHHHHHHHcCeEEEEECC-----------C--eEEEEEEe----eeEEEEeCCCCCCC----EEEEC--CEEEEeeeeEE
Confidence 557777889999887621 2 23788887 45677787864432 15555 5555431 11
Q ss_pred EEeC---CCcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCC-CCeeEEEEEeCCccccccCCCCc
Q 004068 363 FLHP---VHNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSL-QATSRKSIVTNPCAALNISSADC 437 (775)
Q Consensus 363 ~~dp---~~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~-~~~~~~g~VS~~~~~~~~~~~~~ 437 (775)
..|+ ..|+++|+++.. .+ .+++. -|.+. ......+.++-+.... ......|.++.-. .++.+..
T Consensus 66 L~~~~g~~~Elt~v~l~~~~kf-----RDIrk-fi~~~--~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g-~inlsg~-- 134 (187)
T 3qzr_A 66 LVDEQGVNLALTLITLDTNEKF-----RDITK-FIPEN--ISTASDATLVINTEHMPSMFVPVGDVVQYG-FLNLSGK-- 134 (187)
T ss_dssp CCCTTCCCCSEEEEEECSSCCB-----CCCGG-GSCSS--CCCEEEEEEEECCSSSCSEEEEEEEEEEEE-EEEETTE--
T ss_pred EECCCCCEEEEEEEEcCCCccc-----cchHH-hCccC--cCCCCceEEEEEcCCCcceEEEeccEEEec-eEeCCCC--
Confidence 1233 369999999753 33 23322 22222 2222245555555444 3334446555311 2222222
Q ss_pred ccccccceEEEEEeeccCC-CCCceEEccCceEEEEeeee
Q 004068 438 PRYRAMNMEVIELDTDFGS-TFSGVLTDEHGRVQAIWGSF 476 (775)
Q Consensus 438 pryra~n~e~I~~Da~i~~-~~GGpL~d~~G~VvGI~~~~ 476 (775)
|.. ..+.=+.+.-. .|||+|+. .|+++||+.+.
T Consensus 135 ~t~-----r~l~Y~~pTk~G~CGgvl~~-~gkIiGIHvaG 168 (187)
T 3qzr_A 135 PTH-----RTMMYNFPTKAGQCGGVVTS-VGKIIGIHIGG 168 (187)
T ss_dssp EEE-----EEEEESSCCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred ccc-----cEEEECCCCCCCccCCeEEe-cCcEEEEEECC
Confidence 111 34444554444 57999997 89999999865
No 487
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=90.25 E-value=11 Score=37.12 Aligned_cols=153 Identities=11% Similarity=0.074 Sum_probs=78.8
Q ss_pred hhhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeEE--EE
Q 004068 285 SFAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPGE--VV 362 (775)
Q Consensus 285 ~~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A~--Vv 362 (775)
+++.+-+++-+|.|++ . . +.-||+-|. +.+.|.++|.-+.+ .+.+. ++.++.. ..
T Consensus 12 ef~~sl~k~N~~~vtT--~---------~--G~ft~LgI~----d~~~viP~Ha~p~~----~i~i~--G~~~~v~d~~~ 68 (190)
T 4dcd_A 12 DYAVAMAKRNIVTATT--S---------K--GEFTMLGVH----DNVAILPTHASPGE----SIVID--GKEVEILDAKA 68 (190)
T ss_dssp HHHHHHHHHHEEEEEE--T---------T--EEEEEEEEE----BTEEEEEGGGCCCS----EEEET--TEEEEEEEEEE
T ss_pred HHHHHHHHcCeEEEEe--C---------C--eEEEEEEEE----CcEEEEeCCCCCCc----EEEEC--CEEEEeeEEEE
Confidence 4566677778887753 1 2 234677787 55677787854432 35555 4544331 12
Q ss_pred EEeCC---CcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCC-eeEEEEEeCCccccccCCCCc
Q 004068 363 FLHPV---HNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQA-TSRKSIVTNPCAALNISSADC 437 (775)
Q Consensus 363 ~~dp~---~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~-~~~~g~VS~~~~~~~~~~~~~ 437 (775)
-.++. .|+++|+++.. .+ .+|+ ++=++. ...+..+.++=+...... ....|.+..-. .++... .
T Consensus 69 l~~~~gv~lElt~V~l~r~~kF-----RDIr--~fi~~~-~~~~~~~~L~vn~~~~~~~~~~vg~v~~~g-~i~lsg--~ 137 (190)
T 4dcd_A 69 LEDQAGTNLEITIITLKRNEKF-----RDIR--PHIPTQ-ITETNDGVLIVNTSKYPNMYVPVGAVTEQG-YLNLGG--R 137 (190)
T ss_dssp EECTTCCEEEEEEEEESSSCCB-----CCCG--GGSCSS-CCCEEEEEEEECSSSSTTEEEEEEEEEEEE-EEEETT--E
T ss_pred EecCCCCeEEEEEEEcCCCccc-----cchh--Hhcccc-CCCCCceEEEEecCCCccEEEEeeeeEEec-cccCCC--C
Confidence 23433 49999999854 22 3443 222222 223334443333323332 23334444211 122211 1
Q ss_pred ccccccceEEEEEeeccC-CCCCceEEccCceEEEEeeeec
Q 004068 438 PRYRAMNMEVIELDTDFG-STFSGVLTDEHGRVQAIWGSFS 477 (775)
Q Consensus 438 pryra~n~e~I~~Da~i~-~~~GGpL~d~~G~VvGI~~~~~ 477 (775)
|-. .++.=+.+.- +.|||||+. +|+++||..+.-
T Consensus 138 ~t~-----r~l~Y~~pT~~G~CGg~l~~-~gkIlGIHvaG~ 172 (190)
T 4dcd_A 138 QTA-----RTLMYNFPTRAGQCGGVITC-TGKVIGMHVGGN 172 (190)
T ss_dssp EEE-----EEEEESSCCCTTCTTCEEEE-TTEEEEEEEEEC
T ss_pred ccc-----ceEEEccCCCCCccCCEEEe-CCCEEEEEECCC
Confidence 222 3444555444 457999995 789999998653
No 488
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=89.82 E-value=0.97 Score=47.03 Aligned_cols=89 Identities=13% Similarity=0.230 Sum_probs=59.2
Q ss_pred ceeEEEEEEEecCCceEEEEecceecc-------CCceEEEEEcCC---------CeEEeEEEEEEeCC--------CcE
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAI-------SASDVMLSFAAF---------PIEIPGEVVFLHPV--------HNF 370 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~-------~~~~I~Vt~~d~---------~~~~~A~Vv~~dp~--------~Dl 370 (775)
...+.|.+|+ .-+|||.+|.+.. ...++.|.+... ...+..+-+..||. .||
T Consensus 55 ~~~CgGsLIs----~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DI 130 (289)
T 2bdy_A 55 ELLCGASLIS----DRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDI 130 (289)
T ss_dssp EEEEEEEECS----SSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCC
T ss_pred CEEEEEEEec----CCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeE
Confidence 4679999999 6799999998742 235677776421 12344555667763 499
Q ss_pred EEEEeCCC-CCCcccccceeeeeeCCCCC----CCCCCEEEEEEeC
Q 004068 371 ALIAYDPS-SLGVAGASVVRAAELLPEPA----LRRGDSVYLVGLS 411 (775)
Q Consensus 371 AILk~d~~-~l~~~~~~~v~~~~lg~s~~----l~~Gd~V~aiG~p 411 (775)
||||++.. .+. ..+.++.|..... +..|..+.+.|+-
T Consensus 131 ALl~L~~pv~~~----~~v~picLp~~~~~~~~~~~g~~~~v~GWG 172 (289)
T 2bdy_A 131 ALMKLKKPVAFS----DYIHPVCLPDRETAASLLQAGYKGRVTGWG 172 (289)
T ss_dssp EEEEESSCCCCB----TTBCCCBCCCHHHHHHHCCTTCEEEEEESS
T ss_pred EEEEECCccccC----CcccccCCCCccccccccCCCCEEEEECCC
Confidence 99999643 332 3456666644221 4679999999975
No 489
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=89.63 E-value=0.82 Score=50.00 Aligned_cols=89 Identities=21% Similarity=0.260 Sum_probs=60.9
Q ss_pred eeEEEEEEEecCCceEEEEecceeccC---CceEEEEEcCC------CeEEeEEEEEEeCC--------CcEEEEEeCCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAIS---ASDVMLSFAAF------PIEIPGEVVFLHPV--------HNFALIAYDPS 378 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~---~~~I~Vt~~d~------~~~~~A~Vv~~dp~--------~DlAILk~d~~ 378 (775)
..+.|.+|+ .-+|||.+|.+... ...+.|.+... ...+..+-+..||. .||||||++..
T Consensus 183 ~~CgGsLIs----~~~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~ 258 (403)
T 1zjk_A 183 TTAAGALLY----DNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNK 258 (403)
T ss_dssp CCEEEEEET----TTEEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSC
T ss_pred CceEEEEec----CCEEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCc
Confidence 358899999 67999999987543 45666776421 24566666777763 59999999753
Q ss_pred -CCCcccccceeeeeeCCCCC---CCCCCEEEEEEeCC
Q 004068 379 -SLGVAGASVVRAAELLPEPA---LRRGDSVYLVGLSR 412 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~~---l~~Gd~V~aiG~p~ 412 (775)
.+. ..+.++.|-.... +..|+.+++.|+..
T Consensus 259 v~~~----~~v~picLp~~~~~~~~~~~~~~~v~GWG~ 292 (403)
T 1zjk_A 259 VVIN----SNITPICLPRKEAESFMRTDDIGTASGWGL 292 (403)
T ss_dssp CCCB----TTBCCCBCCCGGGGGGSSTTCEEEEEESCT
T ss_pred CcCC----CceecccCCCcccccccCCCCeEEEEcCCc
Confidence 332 3456666654321 56899999999753
No 490
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=89.11 E-value=21 Score=36.13 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=66.1
Q ss_pred CcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcC--------CCeEEeEEEE
Q 004068 293 PTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAA--------FPIEIPGEVV 362 (775)
Q Consensus 293 ~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d--------~~~~~~A~Vv 362 (775)
|-+|.+..... ++ .....+.|.+|+ .-+|||.+|.+... ...+.|.+.. ....+..+-+
T Consensus 36 Pw~v~l~~~~~-----~~--~~~~~CgGsLIs----~~~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i 104 (276)
T 2vnt_A 36 PWFAAIYRRHR-----GG--SVTYVCGGSLMS----PCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENL 104 (276)
T ss_dssp TTEEEEEEECS-----SS--CEEEEEEEEEEE----TTEEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CcEEEEEEecC-----CC--cceeEEEEEEee----CCEEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEE
Confidence 67777754322 11 233579999999 77999999987543 2334454421 1346777777
Q ss_pred EEeCC---------CcEEEEEeCCCC-CCcccccceeeeeeCCC-CCCCCCCEEEEEEeC
Q 004068 363 FLHPV---------HNFALIAYDPSS-LGVAGASVVRAAELLPE-PALRRGDSVYLVGLS 411 (775)
Q Consensus 363 ~~dp~---------~DlAILk~d~~~-l~~~~~~~v~~~~lg~s-~~l~~Gd~V~aiG~p 411 (775)
..||. .|+|||+++... .+..-...+.++.|... .....|..+.+.|.-
T Consensus 105 ~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G 164 (276)
T 2vnt_A 105 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFG 164 (276)
T ss_dssp EECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESC
T ss_pred EEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEee
Confidence 77875 489999995321 11111234555666432 235779999998864
No 491
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=88.63 E-value=18 Score=35.19 Aligned_cols=151 Identities=18% Similarity=0.182 Sum_probs=78.5
Q ss_pred hhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEe--EEEEE
Q 004068 286 FAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIP--GEVVF 363 (775)
Q Consensus 286 ~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~--A~Vv~ 363 (775)
++.+-+++.++.|.. . . ..-||+-|. +-..|.++|..+.+ .+.+. +..+. =...-
T Consensus 6 f~~~l~k~n~~~i~t--~---------~--g~~t~LgI~----d~~~vvP~Ha~~~~----~i~i~--g~~~~v~d~~~l 62 (182)
T 2b0f_A 6 FALSLLRKNIMTITT--S---------K--GEFTGLGIH----DRVCVIPTHAQPGD----DVLVN--GQKIRVKDKYKL 62 (182)
T ss_dssp HHHHHHHHHEEEEEE--T---------T--EEEEEEEEE----BTEEEEESTTCCCS----EEEET--TEEEEEEEEEEE
T ss_pred HHHHHHhcCEEEEEe--C---------C--ccEEEEEEe----eeEEEEecCCCCcc----EEEEC--CEEEEeeeeeEE
Confidence 455567777777752 1 1 223778888 44667787876543 34454 44321 12223
Q ss_pred EeC---CCcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCC-eeEEEEEeCCccccccCCCCcc
Q 004068 364 LHP---VHNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQA-TSRKSIVTNPCAALNISSADCP 438 (775)
Q Consensus 364 ~dp---~~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~-~~~~g~VS~~~~~~~~~~~~~p 438 (775)
.|. ..|+++|+++.. .+ .+++. -+.+.. ... +.+.++ +..+... ....|.+..-. .++.... +
T Consensus 63 ~~~~~~~~eltlv~l~~~~kf-----RDIrk-fi~~~~-~~~-~~~lv~-n~~~~p~~~~~vg~~~~~g-~i~l~G~--~ 130 (182)
T 2b0f_A 63 VDPENINLELTVLTLDRNEKF-----RDIRG-FISEDL-EGV-DATLVV-HSNNFTNTILEVGPVTMAG-LINLSST--P 130 (182)
T ss_dssp EETTTEEEEEEEEEECCSSCB-----CCGGG-TBCSSC-CCS-EEEEEE-ESSSCEEEEEEEEEEEEEE-EEEETTE--E
T ss_pred EcCCCCeeEEEEEECCCcccc-----cchHH-hcCCCC-CCC-ceEEEE-EcCCCceEEEEecceEEec-eEcCCCc--E
Confidence 343 479999999653 33 33433 222222 122 444444 4434333 23455555311 1222111 1
Q ss_pred cccccceEEEEEeecc-CCCCCceEEccCceEEEEeeeec
Q 004068 439 RYRAMNMEVIELDTDF-GSTFSGVLTDEHGRVQAIWGSFS 477 (775)
Q Consensus 439 ryra~n~e~I~~Da~i-~~~~GGpL~d~~G~VvGI~~~~~ 477 (775)
- -.++.=+++. .+.|||||+. .|+++||+.+..
T Consensus 131 t-----~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHvaG~ 164 (182)
T 2b0f_A 131 T-----NRMIRYDYATKTGQCGGVLCA-TGKIFGIHVGGN 164 (182)
T ss_dssp E-----EEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEEE
T ss_pred e-----cceEEeccCCCCcccCCeEEe-CCCEEEEEeCCC
Confidence 1 1344445554 4457999986 889999998753
No 492
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=88.20 E-value=0.9 Score=48.97 Aligned_cols=87 Identities=16% Similarity=0.204 Sum_probs=62.4
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCC----------ceEEEEEcCCCeEEeEEEEEEeCC---CcEEEEEeCCC-CCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISA----------SDVMLSFAAFPIEIPGEVVFLHPV---HNFALIAYDPS-SLG 381 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~----------~~I~Vt~~d~~~~~~A~Vv~~dp~---~DlAILk~d~~-~l~ 381 (775)
..+.|.+|+ .-+|||.+|.+.... ....+.... ...+..+-+..||. .||||||++.. .+.
T Consensus 126 ~~CGGsLIs----~~~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~V~~i~~HP~y~~nDIALlkL~~~v~~~ 200 (347)
T 4f4o_C 126 LTSGATLIN----EQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGK-KQEVEIEKVIFHPDNSTVDIGLIKLKQKVPVN 200 (347)
T ss_dssp CEEECCBCS----SSEEEECHHHHTTTSCTTCCHHHHGGGCEEEETT-TEEECEEEEEECSCTTTCCCEEEEESSCCCCS
T ss_pred EEEEEEEEc----CCEEEeCcccccCCCCCcceEEeeeeeeeecCCC-eEEEEEEEEEECcCCCCCCEEEEEECCCccCC
Confidence 568999999 779999999874321 123344443 66777777888986 59999999643 332
Q ss_pred cccccceeeeeeCCCCCCCCCCEEEEEEeC
Q 004068 382 VAGASVVRAAELLPEPALRRGDSVYLVGLS 411 (775)
Q Consensus 382 ~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p 411 (775)
..+.++.|-....+..|...++.|.-
T Consensus 201 ----~~v~PicLp~~~~~~~g~~~~v~GWG 226 (347)
T 4f4o_C 201 ----ERVMPICLPSKDYVNVGLVGYVSGWG 226 (347)
T ss_dssp ----SSCCCCBCCSSCCCCTTCEEEEEECS
T ss_pred ----CceeeeecCccccCCCCcEEEEeccc
Confidence 35666777655557889999999874
No 493
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=88.05 E-value=0.92 Score=45.39 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=57.4
Q ss_pred eeEEEEEEEecCCceEEEEecceeccCCceEEEEEcC--------CCeEEeEEEEEEeCC---------CcEEEEEeCCC
Q 004068 316 FFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAA--------FPIEIPGEVVFLHPV---------HNFALIAYDPS 378 (775)
Q Consensus 316 ~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d--------~~~~~~A~Vv~~dp~---------~DlAILk~d~~ 378 (775)
..++|.+|+ .-+|||.+|.+... ..+.|.+.. ....+..+-+..||. +|+||||++..
T Consensus 24 ~~CgGtLIs----~~~VLTAAhC~~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~ 98 (235)
T 2wph_S 24 AFCGGSIVN----EKWIVTAAHCVETG-VKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEP 98 (235)
T ss_dssp TCEEEEEEE----TTEEEECGGGCCTT-SCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSC
T ss_pred eeEEEEEEe----CCEEEECHHHCcCC-CCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCc
Confidence 569999999 67999999987543 356666532 123455566667764 49999999743
Q ss_pred -CCCcccccceeeeeeCCCCC---CCCCCEEEEEEeC
Q 004068 379 -SLGVAGASVVRAAELLPEPA---LRRGDSVYLVGLS 411 (775)
Q Consensus 379 -~l~~~~~~~v~~~~lg~s~~---l~~Gd~V~aiG~p 411 (775)
.+. ..+.++.|..... +..|..+++.|+.
T Consensus 99 ~~~~----~~v~picL~~~~~~~~~~~~~~~~v~GwG 131 (235)
T 2wph_S 99 LVLN----SYVTPICIADKEYTNIFLKFGSGYVSGWG 131 (235)
T ss_dssp CCCB----TTBCCCBCCCHHHHHHHHHTCEEEEEESS
T ss_pred CcCC----CCccccCCCCCcccccccCCccEEEEeCC
Confidence 332 3455666654321 2358889999974
No 494
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=87.53 E-value=2.6 Score=46.45 Aligned_cols=89 Identities=13% Similarity=0.202 Sum_probs=60.0
Q ss_pred ceeEEEEEEEecCCceEEEEecceeccC-CceEEEEEcCC--------------------CeEEeEEEEEEeCC------
Q 004068 315 HFFGTGVIIYHSQSMGLVVVDKNTVAIS-ASDVMLSFAAF--------------------PIEIPGEVVFLHPV------ 367 (775)
Q Consensus 315 ~~~GSGvVId~~~~~GlVLTnr~~V~~~-~~~I~Vt~~d~--------------------~~~~~A~Vv~~dp~------ 367 (775)
...+.|.+|+ .-+|||.+|.+... ...+.|.+... ...+..+-+..||.
T Consensus 145 ~~~CGGsLIs----~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~ 220 (408)
T 2xxl_A 145 RFLCGGAMIS----ERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHI 220 (408)
T ss_dssp EEEEEEEEEE----TTEEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTT
T ss_pred eEEEEEEEEE----CCEEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCcccc
Confidence 4679999999 67999999987543 24566665421 13455555667765
Q ss_pred -CcEEEEEeCCC-CCCcccccceeeeeeCCCCC----CCCCCEEEEEEeC
Q 004068 368 -HNFALIAYDPS-SLGVAGASVVRAAELLPEPA----LRRGDSVYLVGLS 411 (775)
Q Consensus 368 -~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~----l~~Gd~V~aiG~p 411 (775)
.|+|||+++.. .+. ..+.++.|-.... ...|..+++.|+-
T Consensus 221 ~nDIALL~L~~~v~~~----~~V~PICLp~~~~~~~~~~~~~~~~v~GWG 266 (408)
T 2xxl_A 221 MHDIALLKLNRSVPFQ----KHIKPICLPITDELKEKAEQISTYFVTGWG 266 (408)
T ss_dssp BSCCEEEEESSCCCCB----TTBCCCBCCCSHHHHHHTTTCSEEEEEECC
T ss_pred ccceEEEEECCccccc----cCccccCCCCcccccccccCCCEEEEEEeC
Confidence 59999999743 332 3566677754321 4678999999975
No 495
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=87.49 E-value=23 Score=34.75 Aligned_cols=152 Identities=14% Similarity=0.139 Sum_probs=83.5
Q ss_pred hhhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeE-E-EE
Q 004068 285 SFAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPG-E-VV 362 (775)
Q Consensus 285 ~~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A-~-Vv 362 (775)
+++.+-+++.++.|++.. +. =||+-|. +-..|.++|.-+.+ .|.+. +++++. . ..
T Consensus 7 ef~~sl~k~N~~~vtT~~-----------G~--ft~LgI~----dr~~vvPtHa~~~~----~i~i~--G~~~~v~d~~~ 63 (191)
T 3q3y_A 7 EFAVAMMKRNASTVKTEY-----------GE--FTMLGIY----DRWAVLPRHAKPGP----TILMN--DQEVGVLDAKE 63 (191)
T ss_dssp HHHHHHHHHHEEEEEETT-----------EE--EEEEEEE----BTEEEEEGGGCCCS----EEEET--TEEEEEEEEEE
T ss_pred HHHHHHHHcCeEEEEECC-----------Cc--EEEEEEe----ceEEEEECCCCCCC----EEEEC--CEEEEeeeEEE
Confidence 457777888999886522 22 3777776 44667787764322 15555 566653 1 11
Q ss_pred EEeCC---CcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCC-CeeEEEEEeCCccccccCCCCc
Q 004068 363 FLHPV---HNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQ-ATSRKSIVTNPCAALNISSADC 437 (775)
Q Consensus 363 ~~dp~---~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~-~~~~~g~VS~~~~~~~~~~~~~ 437 (775)
-.|.. .|+++|+++.. .+ .+++. |=+.. ........++.+..... .....|.+..- ..++.+..
T Consensus 64 L~~~~g~~lElt~v~l~~~~kF-----RDIrk--fi~~~-~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~-g~inlsg~-- 132 (191)
T 3q3y_A 64 LVDKDGTNLELTLLKLNRNEKF-----RDIRG--FLARE-EVEVNEAVLAINTSKFPNMYIPVGQVTDY-GFLNLGGT-- 132 (191)
T ss_dssp EECTTCCEEEEEEEEEECSSCB-----CCCGG--GBCSS-CCCEEEEEEEECSSSSTTEEEEEEEEEEE-EEEEETTE--
T ss_pred EEcCCCCEEEEEEEECCCCccc-----cchHH--hcccc-cccCCceEEEEEcCCCcceEEEeccEEEc-ceEeCCCC--
Confidence 12333 49999999753 33 23432 32322 23333445555554443 33344655531 12333222
Q ss_pred ccccccceEEEEEeeccCC-CCCceEEccCceEEEEeeee
Q 004068 438 PRYRAMNMEVIELDTDFGS-TFSGVLTDEHGRVQAIWGSF 476 (775)
Q Consensus 438 pryra~n~e~I~~Da~i~~-~~GGpL~d~~G~VvGI~~~~ 476 (775)
|.. ..+.=+.+.-. .|||||+. .|+++||..+.
T Consensus 133 ~t~-----r~l~Y~~pTk~G~CGgvL~~-~gkIiGIHvgG 166 (191)
T 3q3y_A 133 PTK-----RMLVYNFPTRAGQCGGVLMS-TGKVLGIHVGG 166 (191)
T ss_dssp EEE-----EEEEEESCCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred ccc-----CEEEecCCCCCCccCCEEEe-CCCEEEEEECC
Confidence 222 34555555444 47999987 79999999865
No 496
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=87.06 E-value=23 Score=34.69 Aligned_cols=154 Identities=16% Similarity=0.106 Sum_probs=78.2
Q ss_pred hhhhhhhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCCceEEEEEcCCCeEEeE--EEE
Q 004068 285 SFAESVIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAFPIEIPG--EVV 362 (775)
Q Consensus 285 ~~~~~~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~~~~~~A--~Vv 362 (775)
+++.+-+++-+|.|++ . . +.=+|+-|. +-++|.++|..+.+ .+.+. ++.+.- ...
T Consensus 5 ef~~sl~k~N~~~vtt--~---------~--G~ft~LgI~----dr~~lvP~Ha~~~~----ti~i~--g~~~~v~d~~~ 61 (190)
T 3zve_A 5 DFAQAIMKKNTVVART--E---------K--GEFTMLGVH----DRVAVIPTHASVGE----TIYIN--DVETKVLDACA 61 (190)
T ss_dssp HHHHHHHHHHEEEEEE--T---------T--EEEEEEEEE----BTEEEEEGGGCCCS----EEEET--TEEEEEEEEEE
T ss_pred HHHHHHHHcCEEEEEe--C---------C--EEEEEEEEe----CCEEEEecCCCCCc----EEEEC--CEEEEeeEEEE
Confidence 4456666777787752 1 2 234677787 55777887855433 34444 333221 111
Q ss_pred EEeC---CCcEEEEEeCCC-CCCcccccceeeeeeCCCCCCCCCCEEEEEEeCCCCCCeeEEEEEeCCccccccCCCCcc
Q 004068 363 FLHP---VHNFALIAYDPS-SLGVAGASVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSIVTNPCAALNISSADCP 438 (775)
Q Consensus 363 ~~dp---~~DlAILk~d~~-~l~~~~~~~v~~~~lg~s~~l~~Gd~V~aiG~p~g~~~~~~~g~VS~~~~~~~~~~~~~p 438 (775)
..|. ..|+++|+++.. .+ .+|+. .|.+.. -..++.+.++=.+.........|.+..-. .++.... +
T Consensus 62 l~~~~~~~~Dlt~v~l~~~~kF-----RDIr~-~~~~~~-~~~~~~~l~i~s~~~~~~~~~v~~v~~~~-~i~l~g~--~ 131 (190)
T 3zve_A 62 LRDLTDTNLEITIVKLDRNQKF-----RDIRH-FLPRYE-DDYNDAVLSVHTSKFPNMYIPVGQVTNYG-FLNLGGT--P 131 (190)
T ss_dssp EECTTCCEEEEEEEEECCSSCB-----CCCGG-GSCSSC-CCEEEEEEEECSSSCSSEEEEEEEEEEEE-EEEETTE--E
T ss_pred EEcCCCCeEEEEEEEcCCCccc-----CchHH-hccccC-CCCCCeEEEEECCCCcceEEecccceEec-eeecCCC--e
Confidence 2333 349999999764 22 23321 232222 23445555554333222223334444211 2222222 2
Q ss_pred cccccceEEEEEeeccC-CCCCceEEccCceEEEEeeeec
Q 004068 439 RYRAMNMEVIELDTDFG-STFSGVLTDEHGRVQAIWGSFS 477 (775)
Q Consensus 439 ryra~n~e~I~~Da~i~-~~~GGpL~d~~G~VvGI~~~~~ 477 (775)
-+ .++.=+++.- +.|||||+. +|+++||..+..
T Consensus 132 ~~-----~~~~Y~~pT~~G~CG~~li~-~gkI~GiHvaG~ 165 (190)
T 3zve_A 132 TH-----RILMYNFPTRAGQCGGVVTT-TGKVIGIHVGGN 165 (190)
T ss_dssp EE-----EEEEESSCCCTTCTTCEEEE-TTEEEEEEEEEC
T ss_pred ee-----eeEEEecCCCCCccCCeEEE-CCCEEEEEECcC
Confidence 22 3444445444 447999985 789999998653
No 497
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=85.84 E-value=1.4 Score=47.05 Aligned_cols=87 Identities=18% Similarity=0.196 Sum_probs=56.4
Q ss_pred eEEEEEEEecCCceEEEEecceeccC------CceEEEEEcCCC-------eEEeEEEEEEeCC----------CcEEEE
Q 004068 317 FGTGVIIYHSQSMGLVVVDKNTVAIS------ASDVMLSFAAFP-------IEIPGEVVFLHPV----------HNFALI 373 (775)
Q Consensus 317 ~GSGvVId~~~~~GlVLTnr~~V~~~------~~~I~Vt~~d~~-------~~~~A~Vv~~dp~----------~DlAIL 373 (775)
.+.|.+|+ .-+|||.+|.+... ...+.|.+.... ..+..+-+..||. .|||||
T Consensus 112 ~CgGsLIs----~~~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl 187 (329)
T 1md8_A 112 RGGGALLG----DRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALL 187 (329)
T ss_dssp EEEEEEET----TTEEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEE
T ss_pred CcceEEec----CCEEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEEEE
Confidence 58999999 67999999987532 234556554211 1234555666764 399999
Q ss_pred EeCCC-CCCcccccceeeeeeCCCC-CCCCCCEEEEEEeC
Q 004068 374 AYDPS-SLGVAGASVVRAAELLPEP-ALRRGDSVYLVGLS 411 (775)
Q Consensus 374 k~d~~-~l~~~~~~~v~~~~lg~s~-~l~~Gd~V~aiG~p 411 (775)
|++.. .+. ..+.++.|.... .+..|..+++.|+-
T Consensus 188 ~L~~~v~~~----~~v~PicLp~~~~~~~~g~~~~v~GWG 223 (329)
T 1md8_A 188 ELENSVTLG----PNLLPICLPDNDTFYDLGLMGYVSGFG 223 (329)
T ss_dssp EESSCCCCB----TTBCCCBCCCSGGGGCTTCEEEEEECC
T ss_pred EECCcccCC----CceEccccCCCccccCCCCEEEEEeCC
Confidence 99643 332 346666775433 23679999999975
No 498
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=82.88 E-value=3.3 Score=46.20 Aligned_cols=89 Identities=20% Similarity=0.255 Sum_probs=58.8
Q ss_pred hcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccC--CceEEEEEcCCCeEEeEEEEEEeCC-
Q 004068 291 IEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAIS--ASDVMLSFAAFPIEIPGEVVFLHPV- 367 (775)
Q Consensus 291 l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~--~~~I~Vt~~d~~~~~~A~Vv~~dp~- 367 (775)
--|-+|.+....+ . .....+.|.+|+ .-+|||.+|++... ...+.|.+......+..+-+..||.
T Consensus 225 ~~Pw~v~l~~~~~-----~---~~~~~CgGsLIs----~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y 292 (497)
T 1rrk_A 225 KQPWQAKISVIRP-----S---KGHESCMGAVVS----EYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNY 292 (497)
T ss_dssp HSTTEEEEEECC----------CCCEEEEEEECS----SSEEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTC
T ss_pred ccCcEEEEEEEcC-----C---CCCceeEEEEec----CCEEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCc
Confidence 3477777754222 1 234679999999 67999999988643 3568888865345666666777764
Q ss_pred ---------------CcEEEEEeCCC-CCCcccccceeeeeeCC
Q 004068 368 ---------------HNFALIAYDPS-SLGVAGASVVRAAELLP 395 (775)
Q Consensus 368 ---------------~DlAILk~d~~-~l~~~~~~~v~~~~lg~ 395 (775)
.|+||||++.. .+. ..+.++.|..
T Consensus 293 ~~~~~~~~~~~~~~~nDIALl~L~~~v~~~----~~v~picLp~ 332 (497)
T 1rrk_A 293 NINGKKEAGIPEFYDYDVALIKLKNKLKYG----QTIRPICLPC 332 (497)
T ss_dssp CTTTTGGGTCSSCCTTCCEEEEESSCCCCB----TTBCCCBCTT
T ss_pred cccccccccccccCCCcEEEEEECCCCcCC----CCeeeeeCCC
Confidence 48999999643 332 3456666643
No 499
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=82.59 E-value=41 Score=33.44 Aligned_cols=75 Identities=11% Similarity=0.139 Sum_probs=44.2
Q ss_pred hhcCcEEEEEEeecCccccCCccccceeEEEEEEEecCCceEEEEecceeccCC--c--eEEEEEcCCCeEEeEE-----
Q 004068 290 VIEPTLVMFEVHVPPSCMIDGVHSQHFFGTGVIIYHSQSMGLVVVDKNTVAISA--S--DVMLSFAAFPIEIPGE----- 360 (775)
Q Consensus 290 ~l~~SvV~V~~~~~~~~~~Dg~~~~~~~GSGvVId~~~~~GlVLTnr~~V~~~~--~--~I~Vt~~d~~~~~~A~----- 360 (775)
++.+=+|.+.+..+ ||. .....+|+-|. +-..|+.+|..+... . .-++.+. +..+...
T Consensus 8 ~v~~N~~~i~~~~~-----~~~--~~~~~t~LgI~----~r~~lvP~H~~~~~~~~~~~~~~i~i~--g~~~~~~~~~v~ 74 (212)
T 2hal_A 8 LVRKNLVQFGVGEK-----NGS--VRWVMNALGVK----DDWLLVPSHAYKFEKDYEMMEFYFNRG--GTYYSISAGNVV 74 (212)
T ss_dssp HHHHHEEEEEEEET-----TSC--CEEEEEEEEEE----BTEEEEEGGGTTTSTTGGGEEEEEEET--TEEEEEEGGGSE
T ss_pred hhhccEEEEEEeCC-----CCC--cceEEEEEEEc----CCEEEEecccCcccccccccceEEEEC--CEEEeeccccce
Confidence 45566777765433 442 23567999999 557778878654221 1 2234454 5655443
Q ss_pred EEEEe-CCCcEEEEEeCC
Q 004068 361 VVFLH-PVHNFALIAYDP 377 (775)
Q Consensus 361 Vv~~d-p~~DlAILk~d~ 377 (775)
+.-.| ...|+++++++.
T Consensus 75 ~~~~d~~~~Dl~lv~Lp~ 92 (212)
T 2hal_A 75 IQSLDVGFQDVVLMKVPT 92 (212)
T ss_dssp EECSSSSCCSEEEEECTT
T ss_pred eEeccCCCceEEEEECCC
Confidence 33333 358999999965
No 500
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=82.37 E-value=3.4 Score=43.75 Aligned_cols=86 Identities=21% Similarity=0.276 Sum_probs=52.5
Q ss_pred eEEEEEEEecCCceEEEEecceeccCCceEEEEEcCC------CeEEeE---EEEEEeC--------------CCcEEEE
Q 004068 317 FGTGVIIYHSQSMGLVVVDKNTVAISASDVMLSFAAF------PIEIPG---EVVFLHP--------------VHNFALI 373 (775)
Q Consensus 317 ~GSGvVId~~~~~GlVLTnr~~V~~~~~~I~Vt~~d~------~~~~~A---~Vv~~dp--------------~~DlAIL 373 (775)
.+.|.+|+ .-+|||.+|.+.... ...|.+... ...+.. +-+..|| ..|||||
T Consensus 104 ~CgGsLIs----~~~VLTAAHC~~~~~-~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl 178 (333)
T 1elv_A 104 WAGGALIN----EYWVLTAAHVVEGNR-EPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALV 178 (333)
T ss_dssp EEEEEEEE----TTEEEECHHHHTTCS-SCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEE
T ss_pred ceeEEEec----CCEEEehhheeCCCC-CCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEE
Confidence 58999999 679999998875432 123333210 122222 4556665 2599999
Q ss_pred EeCCC-CCCcccccceeeeeeCCCC---CCCCCCEEEEEEeC
Q 004068 374 AYDPS-SLGVAGASVVRAAELLPEP---ALRRGDSVYLVGLS 411 (775)
Q Consensus 374 k~d~~-~l~~~~~~~v~~~~lg~s~---~l~~Gd~V~aiG~p 411 (775)
|++.. .+. ..+.++.|-... .+..|+.+++.|+-
T Consensus 179 ~L~~~v~~~----~~v~PicLp~~~~~~~~~~g~~~~v~GWG 216 (333)
T 1elv_A 179 RLKDPVKMG----PTVSPICLPGTSSDYNLMDGDLGLISGWG 216 (333)
T ss_dssp EESSCCCCB----TTBCCCBCCCSSGGGCCCTTCEEEEEESC
T ss_pred EeCCCCcCC----CcccceecCCCcccccccCCcEEEEEECc
Confidence 99743 332 345566664332 25679999999974
Done!