Your job contains 1 sequence.
>004073
MDIAEVEENLFAASDAKLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIA
LEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIV
NELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALT
ERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGSTPCSPTIQC
SFEDGVHNGNEHAFDRQLSKLCSFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIAS
GQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDS
LDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDES
GNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLES
AVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYLNL
SFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISG
LQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVS
CLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDI
GQQDDDSSEKLKPTYTPTPDHAPESKPLCKSISRRKMGKAFSFLWKSKSYSVSQY
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004073
(775 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 2663 4.7e-277 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 2601 1.8e-270 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 2564 1.5e-266 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 348 2.8e-56 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 313 2.5e-51 3
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 301 4.1e-43 3
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 283 9.6e-42 3
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 252 1.5e-35 3
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 333 1.9e-28 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 221 5.8e-28 3
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 298 4.0e-25 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 318 4.0e-25 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 277 7.8e-25 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 226 2.2e-24 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 298 4.9e-24 2
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 292 1.1e-23 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 284 1.2e-22 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 263 4.7e-22 2
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 178 9.7e-21 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 168 9.7e-21 2
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 169 1.1e-20 2
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 254 1.6e-20 2
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 272 1.9e-20 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 272 3.4e-20 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 267 5.0e-20 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 263 1.3e-19 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 167 2.4e-19 2
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 256 3.7e-19 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 250 5.4e-19 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 206 1.1e-18 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 207 4.7e-18 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 253 5.5e-18 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 179 1.2e-16 2
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 195 1.7e-16 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 168 3.6e-16 3
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 202 4.9e-15 2
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 212 1.4e-14 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 210 7.4e-14 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 135 4.0e-13 2
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 170 8.2e-13 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 194 1.2e-12 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 198 1.9e-12 1
TAIR|locus:2038598 - symbol:AT2G27430 "AT2G27430" species... 188 2.5e-11 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 186 1.2e-10 2
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 185 1.6e-10 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 170 2.4e-09 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 163 4.3e-09 2
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 165 9.8e-09 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 160 2.4e-08 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 158 4.8e-08 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 153 7.5e-08 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 160 7.8e-08 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 155 9.3e-08 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 161 9.5e-08 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 155 1.9e-07 2
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 123 2.0e-07 2
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 157 2.3e-07 2
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 148 7.4e-07 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 155 9.7e-07 2
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 155 9.8e-07 2
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 151 2.7e-06 2
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 145 3.3e-06 1
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 137 5.4e-06 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 138 1.2e-05 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 147 1.3e-05 2
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 139 1.5e-05 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 137 2.4e-05 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 136 3.2e-05 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 139 4.3e-05 2
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 132 5.3e-05 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 139 5.3e-05 2
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 139 5.4e-05 2
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 131 6.9e-05 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 131 6.9e-05 1
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 127 0.00017 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 125 0.00026 1
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 113 0.00051 2
ZFIN|ZDB-GENE-030616-541 - symbol:kpna3 "karyopherin (imp... 122 0.00055 1
UNIPROTKB|O00505 - symbol:KPNA3 "Importin subunit alpha-3... 120 0.00091 1
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 2663 (942.5 bits), Expect = 4.7e-277, P = 4.7e-277
Identities = 539/777 (69%), Positives = 621/777 (79%)
Query: 1 MDIAEVEENLFAASDAKLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIA 60
MD++E+EENLFAASDAKLHGDMCK+LSA+YCK+LS+FPSLE +RPRSKSGIQ LCSLHIA
Sbjct: 1 MDVSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIA 60
Query: 61 LEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIV 120
LEKAKNIL HCSECSKLYLAITGD+VLLKFEKA+SAL +SLRRVEDIVP SIG QIL+IV
Sbjct: 61 LEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIV 120
Query: 121 NELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALT 180
ELE F LDPSEK+VGD IIALLQQG+KF++ +D+ ELE FHQAATRL ITSSR+AL
Sbjct: 121 GELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALA 180
Query: 181 ERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGSTPCSPTIQC 240
ERRALKK+I+RARVEEDKRKESIVAYLLHLMRKYSKLFRSEM+D+NDS STPCSPT Q
Sbjct: 181 ERRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPCSTPCSPTGQG 240
Query: 241 SFEDGVHNGNEHAFDRQLSKLCSFNFRP-NNRRSGQMPLPPEELRCPISLQLMYDPVIIA 299
ED V+ AF RQLSK S N++P N+R+SGQMP+PPEELRCPISLQLMYDPVIIA
Sbjct: 241 PNEDRVN-----AFGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIA 295
Query: 300 SGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPD 359
SGQTYER+CIEKW SDGH++CPKTQQ+LPHL LTPNYCVKGLIASWCE NG++VP PP+
Sbjct: 296 SGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVPTGPPE 355
Query: 360 SLDLNYWRLALSE-ESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQED 418
SLDLNYWRLA+S+ ES NSKS + V C K+++VVPLE S TIE +N E
Sbjct: 356 SLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKNNAPDEV 415
Query: 419 ESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFL 478
+S NV E YQD L ++++ E+L +KC +VE +R+LLKD+EEAR+ GANGFV A L+FL
Sbjct: 416 DSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFL 475
Query: 479 ESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYL 538
ESAV + N+ AQE GAMALFNLAVNNNRNKELML +GVIPLLEKMIS S S G ATALYL
Sbjct: 476 ESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPATALYL 535
Query: 539 NLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGII 598
NLS L+ AKP+IGSS AV F V L T+ QCKLDALHALYNLST NIP LLS+ II
Sbjct: 536 NLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNII 595
Query: 599 SGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQEQA 658
LQ LA G+ +W EK GKEEM +T G++S LATVLDTG+ +EQEQA
Sbjct: 596 KSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQA 655
Query: 659 VSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPV 718
VSCL +LC G+E C QMVLQEGVIP+LVSISVNGS RGRDK+Q+LLMLFREQR RD P
Sbjct: 656 VSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSP 715
Query: 719 DIGQQDDDSSEKLKPTYTPTPDHAPES--KPLCKSISRRK-MGKAFSFLWKSKSYSV 772
+ +++ P P P APES KPL KSISRRK M + FSFLWK KS+S+
Sbjct: 716 N--KEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSI 769
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 2601 (920.7 bits), Expect = 1.8e-270, P = 1.8e-270
Identities = 526/779 (67%), Positives = 617/779 (79%)
Query: 1 MDIAEVEENLFAASDAKLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIA 60
MD+ EVEEN FA DAKLHG MC LS +YCKI+S+FPSLEA+RPRSKSGIQALCSLH+
Sbjct: 1 MDVNEVEENFFAPGDAKLHGKMCNALSVIYCKIMSIFPSLEAARPRSKSGIQALCSLHVV 60
Query: 61 LEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIV 120
LEK KNIL HC+E SKLYLAITGDSV+LKFEKA+S+L +SLRRVEDIV QSIG Q+LEI+
Sbjct: 61 LEKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEIL 120
Query: 121 NELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALT 180
ELE FSLDP+EK++GD II LLQQG F S+DNNELE FHQAATRLGITSSRAALT
Sbjct: 121 MELENTEFSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALT 180
Query: 181 ERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGST--PCSPTI 238
ERR LKKLIERAR+E+DKRKESIVAYLLHLMRKYSKLFRSE+ DDNDSQGS+ PCSPTI
Sbjct: 181 ERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTI 240
Query: 239 QCSFEDGVHNGNEHAFDRQLSKLCSFNFRP--NNRRSGQMPLPPEELRCPISLQLMYDPV 296
Q S +D H AFDRQLSKL SFNFR NNRRS QM +PPEELRCPISLQLMYDPV
Sbjct: 241 QGSIDDA-HG---RAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISLQLMYDPV 296
Query: 297 IIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDS 356
IIASGQTYERICIEKW SDGH+TCPKT Q+L HLCLTPNYCVK LI+SWCE NGV VPD
Sbjct: 297 IIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQVPDG 356
Query: 357 PPDSLDLNYWRLALS-EESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYA 415
PP+SLDLNYWRLALS EST+++S + V SCKLK++KVVPLE SGTI+E E+ Y
Sbjct: 357 PPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIKEEA---CESEY- 412
Query: 416 QEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALL 475
QED+ + ER + L L + + L +KC +VEQIR+LLKDDEEAR+ G NG V ALL
Sbjct: 413 QEDQV--TLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALL 470
Query: 476 RFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATA 535
+FL SA+ E N+ AQ++GAMALFNLAV+NNRNKELMLA+G+IPLLE+M+ N +SHG+ TA
Sbjct: 471 QFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTA 530
Query: 536 LYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA 595
+YLNLS L++AKP+IGSS AVPF+V L +TE QCK+DALH+L++LST P NIP LLSA
Sbjct: 531 IYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSA 590
Query: 596 GIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQ 655
+++ LQSL + + WTEK GK+EM S P LVS L T+LDTGE EQ
Sbjct: 591 DLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQ 650
Query: 656 EQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDH 715
EQAVS L +LCN +E C +MVLQEGVIP+LVSISVNG+ RGR++AQ+LL LFRE RQRD
Sbjct: 651 EQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQRDQ 710
Query: 716 PPVDIGQQDDDSSEKLKPTYTPTPDHAPESKPLCKSISRRKMGKAFSFLWKSKSYSVSQ 774
+ Q + +S + ++ E+KP CKS SR+KMG+AFSFLWKSKS+SV Q
Sbjct: 711 THLTEPQHTEVTSPE--DGFSVASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQ 767
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 2564 (907.6 bits), Expect = 1.5e-266, P = 1.5e-266
Identities = 531/791 (67%), Positives = 613/791 (77%)
Query: 1 MDIAEVEENLFAASDAKLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIA 60
MD+ E+EENLFAASDAKLHGDMCK+LS + CK+LS+FPSLE +RPRSKSGIQALCSLHIA
Sbjct: 1 MDVTELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIA 60
Query: 61 LEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIV 120
LEKAKNIL HCSECSKLYLAITGD+VLLKFEKA+ AL + L+RVEDIVP SIG QILEIV
Sbjct: 61 LEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIV 120
Query: 121 NELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALT 180
ELE F LDPSEK+VGD IIALLQQG+KF++ NDN ELE FH+AATRL ITSSR AL
Sbjct: 121 GELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALA 180
Query: 181 ERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGSTPCSPTIQC 240
ERRALKKLI+RAR EEDKRKESIVAYLLHLMRK SKLFRSE++D+NDS GS PCSP
Sbjct: 181 ERRALKKLIDRARAEEDKRKESIVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPN--- 237
Query: 241 SFEDGVHNGNEHAFDRQLSKLCSFNFRP-NNRRSGQMPLPPEELRCPISLQLMYDPVIIA 299
ED +G+ H F RQLS+ S N +P N+ SGQMP+PPEELRCPISLQLM DPVIIA
Sbjct: 238 --ED---HGSVHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIA 292
Query: 300 SGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPD 359
SGQTYER+CIEKW SDGH+TCPKTQQ+LPH+ LTPN CVKGLIASWCE NG +P PP+
Sbjct: 293 SGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIPSGPPE 352
Query: 360 SLDLNYWRLALSE-ESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQED 418
S DL+YWRLALS+ EST S+S + S KLK +K+VPLE +GT N E+ + +D
Sbjct: 353 SQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEENGTTVVERQNTEESFVSDDD 412
Query: 419 E---SGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALL 475
+ S NV ERYQD L VLNE E L +KC +VE+IRLLLKDDEEAR+F GANGFV ALL
Sbjct: 413 DEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALL 472
Query: 476 RFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATA 535
RFL SAV + N+ AQ+ GAMALFNLAVNNNRNKELML +GVI LLEKMIS++ SHG+ATA
Sbjct: 473 RFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSATA 532
Query: 536 LYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA 595
LYLNLS LD+AK +IGSS AVPFLV+L + + E QCKLDALHALYNLST NIP LLS+
Sbjct: 533 LYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSS 592
Query: 596 GIISGLQSL-AVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIE 654
II LQ L A G+ +W EK GK+E S+ G++S LATVLD G+ E
Sbjct: 593 NIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE 652
Query: 655 QEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQ-R 713
QEQAVSCL +LCNG E C QMVLQEGVIP+LVSISVNG+ RGR+K+Q+LLMLFRE+RQ R
Sbjct: 653 QEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQR 712
Query: 714 DHPPV--DIGQQDDDSSEKLK-P--TYTPTPDHAP----ESKPLCKSISRRK-MGKAFSF 763
D P D Q + + + L P + TP A E + L KS+SRRK M + FSF
Sbjct: 713 DQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSF 772
Query: 764 LWKSKSYSVSQ 774
WK KSYSV +
Sbjct: 773 FWK-KSYSVRE 782
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 348 (127.6 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 72/187 (38%), Positives = 115/187 (61%)
Query: 17 KLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIALEKAKNILHHCSECSK 76
K+H MC +L L +I+ +FP +E +RP SGIQ LC LH AL+K K +L +CSE SK
Sbjct: 14 KMHSSMCLELKRLVDRIMRIFPDIEDARPGCSSGIQTLCLLHNALDKTKQLLQYCSESSK 73
Query: 77 LYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIVNELETIAFSLDPSEKQ 136
LY+A+TGD++L + +A+ +L + L + IVP + +I +IV +L + +L+ SE++
Sbjct: 74 LYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEFSEEE 133
Query: 137 VGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALTERRALKKLIERARVEE 196
G I L+Q+ + S D E++ FH AA +L +++ A +TERR+LK + E +
Sbjct: 134 AGKAIRELMQKSTSSSASPD--EIKDFHYAALKLQLSTPEAIVTERRSLKIICEDHKQNS 191
Query: 197 DKRKESI 203
+SI
Sbjct: 192 FTHHQSI 198
Score = 312 (114.9 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 125/506 (24%), Positives = 217/506 (42%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
PE+ +C +S +MYDPVII+SG T+ER+ I+KW +G+ +CP +++KL L PN +K
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 340 GLIASWCEMNGVSVPDSPPDSLDL-NYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEV 398
I+ WC NG+ V D + N ++S S S I + +
Sbjct: 280 SQISEWCAKNGLDVQDPARKHVKASNSIDFSVSIASFGSSLYNIPDHSGIS---ITDFNS 336
Query: 399 SGTIEESEYNDIEN------IYAQEDESG-NNVFERYQDF-LNVLNEGENL--GQKCNIV 448
S +I+ S Y+ + + + SG + + + ++ L NL + +V
Sbjct: 337 SYSIDSSSYSKMSKGGYFTPMQRIDSASGAGDTDSSHSEIEIDPLCGLTNLPWDAQIKVV 396
Query: 449 EQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEI--GAMALFNLAVNNNR 506
E +R + A + F+ L+ +L++A+ ERN A EI G + L ++ NR
Sbjct: 397 EDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNAL-ERNGTAGEIIKGGLDLLLAFLSGNR 455
Query: 507 NKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGK 566
L V + + + A + LS I SS ++ L+++ + +
Sbjct: 456 RAIESLEEEVFKMFSVFLESEVVAEEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQ 515
Query: 567 TEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXX 626
EH + A+ L NLS+ ++S I L S ++ +
Sbjct: 516 AEH-LQEQAMITLKNLSSSMEICLEMVSLDFIQKLTSFLQ--QKVFCKHSIIILKNLCST 572
Query: 627 XXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGN-EKCCQMVLQEG--VIP 683
G+ + TP ++ +A +L++ EQE A+S L LC E CC +V++E +
Sbjct: 573 EKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCC-LVVREATDIYS 631
Query: 684 ALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDDSSEKLKPTYTPTPDHAP 743
+L+ IS NG+ + A LL E ++ + + + + TP P
Sbjct: 632 SLILISNNGTEEVKVSASELLRALVEVDSDKEEEEEVSSRPEGRTTASPTSQVVTPVTHP 691
Query: 744 ESKPLCKSISRRKM-GKAFSFLWKSK 768
E + S + + G FS L K K
Sbjct: 692 EPVKITPSPKKSGLFGFNFSSLKKKK 717
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 313 (115.2 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 57/119 (47%), Positives = 80/119 (67%)
Query: 243 EDGVHNGNEHAFDRQLSKLCSFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQ 302
+D V +++ ++++ N + + S ++P+ P++ RCPISL++M DPVI++SGQ
Sbjct: 220 KDFVQTEDDNGEEQKVGVNSRSNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQ 279
Query: 303 TYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSL 361
TYER CIEKW+ GHSTCPKTQQ L LTPNY ++ LIA WCE N + P PP SL
Sbjct: 280 TYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIE-PPKPPSSL 337
Score = 234 (87.4 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 84/291 (28%), Positives = 135/291 (46%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 509
+IRLL K + + RV G + L+ L + +S QE AL NL++ N NK
Sbjct: 375 EIRLLAKRNADNRVAIAEAGAIPLLVGLLSTP----DSRIQEHSVTALLNLSICEN-NKG 429
Query: 510 LMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKT 567
+++AG IP + +++ + A A +LS +D+ K IG+ A+P LV L T
Sbjct: 430 AIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGT 489
Query: 568 EHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAV-PGDPMWTEKXXXXXXXXXXX 626
+ K DA AL+NL N + AG+I L L PG M ++
Sbjct: 490 QRG-KKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGM-VDEALAILAILSSH 547
Query: 627 XXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALV 686
GK + S+ + S L + TG +E A + L LC+G+ + + G++ L+
Sbjct: 548 PEGKAIIGSSDAVPS-LVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLI 606
Query: 687 SISVNGSTRGRDKAQRLL-MLFREQRQRDHPPVDIGQQDDDSSEKLKPTYT 736
++ NG+ RG+ KA +LL + R Q+ V Q ++ +E P T
Sbjct: 607 DLAGNGTDRGKRKAAQLLERISRLAEQQKETAVS---QPEEEAEPTHPEST 654
Score = 110 (43.8 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 48/233 (20%), Positives = 112/233 (48%)
Query: 3 IAEVEENLFAASDAKLH-GDMCKKLSALYCKILSVFPSL-EASRPRSKSGIQALCSLHIA 60
+ +V + A SD ++ +C L+ ++ +F + E++ P S+ ++ L +L A
Sbjct: 12 LIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEA 71
Query: 61 LEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRV--EDI-VPQSIGCQIL 117
+ AK+ L CS+ SK+YL + + V K + L +SL ++ E++ + + Q+
Sbjct: 72 MCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVE 131
Query: 118 EIVNELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELES-FHQAATRLGITSSR 176
++++ +D S+ ++ +D+ +L N S+D + + + A +L +
Sbjct: 132 LVLSQFRRAKGRVDVSDDELYEDLQSLC------NKSSDVDAYQPVLERVAKKLHLMEIP 185
Query: 177 AALTERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQ 229
E AL +++ + + + E + A +L +++ + ++E DDN +
Sbjct: 186 DLAQESVALHEMVASSGGDVGENIEEM-AMVLKMIKDF---VQTE--DDNGEE 232
Score = 37 (18.1 bits), Expect = 8.1e-31, Sum P(3) = 8.1e-31
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 654 EQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLM 705
+Q A + LL N + + G IP LV + +R ++ + L+
Sbjct: 368 DQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALL 419
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 301 (111.0 bits), Expect = 4.1e-43, Sum P(3) = 4.1e-43
Identities = 89/265 (33%), Positives = 134/265 (50%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 509
++RLL K + + R+ G +G +V L+ L S +S QE AL NL++N+N K
Sbjct: 567 ELRLLAKHNMDNRIVIGNSGAIVLLVELLYST----DSATQENAVTALLNLSINDNNKKA 622
Query: 510 LMLAAGVIPL---LEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGK 566
+ A + PL LE S + + AAT L+ +LS +++ K IG S A+ LV+L G
Sbjct: 623 IADAGAIEPLIHVLENGSSEAKENSAAT-LF-SLSVIEENKIKIGQSGAIGPLVDLL-GN 679
Query: 567 TEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXX 626
+ K DA AL+NLS N ++ +G + L L P M +K
Sbjct: 680 GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGM-VDKAVAVLANLATI 738
Query: 627 XXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALV 686
G+ + G+ L V++ G +E A + L L + + C MVLQEG +P LV
Sbjct: 739 PEGRNAIGQEGGIPL-LVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLV 797
Query: 687 SISVNGSTRGRDKAQRLLMLFREQR 711
++S +G+ R R+KAQ LL FR QR
Sbjct: 798 ALSQSGTPRAREKAQALLSYFRNQR 822
Score = 246 (91.7 bits), Expect = 4.1e-43, Sum P(3) = 4.1e-43
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 285 CPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIAS 344
CP+SL++M DPVI++SGQTYE+ I++W+ G CPKT+Q L H L PNY VK LIA+
Sbjct: 239 CPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIAN 298
Query: 345 WCEMNGVSVPDSPPDSLDLN 364
WCE N V +PD P S LN
Sbjct: 299 WCETNDVKLPD-PNKSTSLN 317
Score = 46 (21.3 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 227 DSQGSTPCSPTIQCSFEDGVHNGNEHAFDRQLSKLCSFNFRPNNRRSGQMPLP 279
+ +G++P P +GN + D + L F R N+ R + P
Sbjct: 366 EREGASPSRPASALGASSPGISGNGYGLDARRGSLNDFEDRSNDSRELRTDAP 418
Score = 39 (18.8 bits), Expect = 4.1e-43, Sum P(3) = 4.1e-43
Identities = 34/146 (23%), Positives = 59/146 (40%)
Query: 21 DMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIALEKAKNILHHCSECSKLYLA 80
D+ + A K+ V +E+ P+ + I L +KN H E S L
Sbjct: 76 DLFRSWQAFSSKVYFVL-QIESLLPKMRDTIVDTFQF---LMSSKN--HLPDELSPASLE 129
Query: 81 ITGDSVL-LKFEKARSALAESLRRVEDIVPQSIGCQILEIVNELETIAFSLDPSEKQVGD 139
+ + L +E+ S + +LR D V S +IL + E + S +++
Sbjct: 130 QCLEKIKHLSYEEISSVIDGALRDQRDGVGPSP--EILVKIGENTGLR-----SNQEILI 182
Query: 140 DIIALLQQGRKFNDSNDNNELESFHQ 165
+ +AL +Q S +N E+E Q
Sbjct: 183 EAVALERQKEMAEQSENNAEVEFLDQ 208
Score = 39 (18.8 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 227 DSQGSTPCSPTIQCSFEDGVHNGNEH 252
D+ G + S T + S E+G + N H
Sbjct: 416 DAPGRSSVSSTTRGSVENGQTSENHH 441
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 283 (104.7 bits), Expect = 9.6e-42, Sum P(3) = 9.6e-42
Identities = 47/75 (62%), Positives = 59/75 (78%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E RCPISL+LM DPVI+++GQTYER CIEKW++ GH TCP TQQK+ LTPNY ++
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 340 GLIASWCEMNGVSVP 354
LI+ WCE NG+ P
Sbjct: 334 SLISQWCETNGMEPP 348
Score = 224 (83.9 bits), Expect = 9.6e-42, Sum P(3) = 9.6e-42
Identities = 78/303 (25%), Positives = 136/303 (44%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 509
++RLL K + R+ G + LL L S+ + QE AL NL+++ + NK
Sbjct: 390 ELRLLAKRNANNRICIAEAGAIPLLLSLLSSS----DLRTQEHAVTALLNLSIHED-NKA 444
Query: 510 LMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKT 567
++++G +P + ++ N + A A +LS +D+ K IG A+P LV L G+
Sbjct: 445 SIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLL-GEG 503
Query: 568 EHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXX 627
+ K DA AL+NL N + AG++ + L ++
Sbjct: 504 SQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHP 563
Query: 628 XGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMV-LQE-GVIPAL 685
GK + + V L ++ +G +E A + + LC+G + QE G++ L
Sbjct: 564 EGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPL 622
Query: 686 VSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDDSSEKLKPTYTP---TPDHA 742
+++NG+ RG+ KA +LL E+ R + QQ++ S+ P TP+
Sbjct: 623 RELALNGTDRGKRKAVQLL----ERMSR----FLVQQQEEQESQSQASAQVPPQATPEQV 674
Query: 743 PES 745
PE+
Sbjct: 675 PEN 677
Score = 157 (60.3 bits), Expect = 8.9e-35, Sum P(3) = 8.9e-35
Identities = 70/234 (29%), Positives = 105/234 (44%)
Query: 478 LESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN---SHGAAT 534
L S +C ++ Q A L LA N N+ + AG IPLL ++S+S+ A T
Sbjct: 372 LLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVT 431
Query: 535 ALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLS 594
AL LNLS +D K I SS AVP +V + K + + + +A L++LS I +
Sbjct: 432 AL-LNLSIHEDNKASIISSGAVPSIVHVLKNGSM-EARENAAATLFSLSVIDEYKVTIGG 489
Query: 595 AGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVS---GLATVLDTGE 651
G I L L G +K G + GLV GL T TG
Sbjct: 490 MGAIPALVVLLGEGSQRG-KKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN-PTGA 547
Query: 652 LIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLM 705
L+++ A+ L +L + E + E V P LV + +G+ R R+ A +++
Sbjct: 548 LMDEAMAI--LSILSSHPEGKAAIGAAEPV-PVLVEMIGSGTPRNRENAAAVML 598
Score = 63 (27.2 bits), Expect = 9.6e-42, Sum P(3) = 9.6e-42
Identities = 34/131 (25%), Positives = 65/131 (49%)
Query: 24 KKLSALYCKILSVFPSLEASRPRSKS---GIQ---ALCSLHIALEKAKNILHHCSECSKL 77
++L AL +I + P +E R R + G + AL L ALE A +L E S++
Sbjct: 51 RQLLALSRRIRLLGPFVEELRERRRGEGEGEEEERALAPLADALEAALALLRLGREGSRI 110
Query: 78 YLAITGDSVLLKFEKARSALAESLRRV---EDIVPQSIGCQILEIVN-ELETIAFSLDPS 133
L + DSV+ KF+ L ++L + E + + Q+ E+V+ +L+ +D
Sbjct: 111 SLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQV-ELVHAQLKRAKERIDMP 169
Query: 134 EKQVGDDIIAL 144
+ + +D++++
Sbjct: 170 DDEFYNDLLSV 180
Score = 60 (26.2 bits), Expect = 9.8e-25, Sum P(3) = 9.8e-25
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 640 VSGLATVLDTGELIEQEQAVSCLFLLC--NGNEKCCQMVLQEGVIPALVSISVNGSTRGR 697
+ L + L + + EQ A + L LL N N + C + + G IP L+S+ + R +
Sbjct: 369 IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRIC--IAEAGAIPLLLSLLSSSDLRTQ 426
Query: 698 DKAQRLLM 705
+ A L+
Sbjct: 427 EHAVTALL 434
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 252 (93.8 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 61/172 (35%), Positives = 96/172 (55%)
Query: 224 DDNDSQGSTPCSPTIQCSFEDGVHNGNEHAFDRQLSKLCSFNFRPNNRRSGQMPLPPEEL 283
++ + Q S P + S + + DR L K+ + N +++S ++ +P + L
Sbjct: 191 EEEEKQSSPPLRRSSSISL--AYYLSKDADTDR-LDKMVNKN-TDESKKSDKLTIPVDFL 246
Query: 284 RCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIA 343
CP+SL+LM DPVI+A+GQTYER I++W+ G+ TCPKTQQKL + LTPNY ++ LI+
Sbjct: 247 -CPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLIS 305
Query: 344 SWCEMNGVSVPDS-----PPDSLDLNYWRLA---LSEESTNSKSNEI--VRS 385
WC + + P +S D++ R LS ST + N + +RS
Sbjct: 306 RWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRS 357
Score = 220 (82.5 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 76/273 (27%), Positives = 123/273 (45%)
Query: 446 NIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNN 505
N V +IR L K + R+ G + L+ L S + QE + NL++ N
Sbjct: 350 NAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS----EDVATQENAITCVLNLSIYEN 405
Query: 506 RNKELMLAAGVIPLLEKMI--SNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELC 563
NKEL++ AG + + +++ + A A +LS D+ K IIG S A+P LV+L
Sbjct: 406 -NKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLL 464
Query: 564 KGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTEKXXXXXXX 622
+ T K DA AL+NL N + AGI++ L + L+ ++
Sbjct: 465 ENGTPRG-KKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSV 523
Query: 623 XXXXXXGKEEM---NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQE 679
K + N+ P L+ +L T + +E A + L LC + + + +
Sbjct: 524 LANNQDAKSAIVKANTLPALIG----ILQTDQTRNRENAAAILLSLCKRDTEKLITIGRL 579
Query: 680 GVIPALVSISVNGSTRGRDKAQRLLMLFREQRQ 712
G + L+ +S NG+ RG+ KA LL L R+ Q
Sbjct: 580 GAVVPLMDLSKNGTERGKRKAISLLELLRKACQ 612
Score = 153 (58.9 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 55/238 (23%), Positives = 111/238 (46%)
Query: 472 VALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--- 528
++++R L + R++ + + +L+ + N+ L+ AG IP+L ++++ +
Sbjct: 330 MSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVAT 389
Query: 529 SHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSN 588
A T + LNLS ++ K +I + AV +V++ + T + + +A L++LS N
Sbjct: 390 QENAITCV-LNLSIYENNKELIMFAGAVTSIVQVLRAGTM-EARENAAATLFSLSLADEN 447
Query: 589 IPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVL- 647
+ +G I L L G P +K G + G+V+ L +L
Sbjct: 448 KIIIGGSGAIPALVDLLENGTPRG-KKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLS 506
Query: 648 DTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLM 705
D+ ++A++ L +L N N+ +++ +PAL+ I TR R+ A +L+
Sbjct: 507 DSTRHRMVDEALTILSVLAN-NQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILL 563
Score = 38 (18.4 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 30/120 (25%), Positives = 49/120 (40%)
Query: 2 DIAEVEEN--LFAASDAKLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHI 59
DI E+ N +F A L +C L+ L +I P A+ S++ + L +
Sbjct: 17 DIVEIPLNTGMFKKDCADLTRRVCL-LTHLLEEIRDSTPIDSAASSSSENDWWS--DLVV 73
Query: 60 ALEKAKNIL-------HHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSI 112
L+ AK +L S+ + ++ V K EKA S L L + D V + +
Sbjct: 74 GLQAAKRLLSTARFQARDSSDGAAKRISFQFQCVTWKLEKALSNLPYDLYDISDEVGEQV 133
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 333 (122.3 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 113/401 (28%), Positives = 178/401 (44%)
Query: 277 PLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNY 336
P+ P+E RCPISL+LM DPVI++SGQTYER CI+KWL GH TCPKTQQ L H LTPN+
Sbjct: 226 PIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNF 285
Query: 337 CVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLA-LSEESTNSKSNEIVRSCKLKEMKVVP 395
+K LI+ WCE NG+ +P + +S D + + S N + RS E +
Sbjct: 286 VLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRL-RSGNQDEQRAAA 344
Query: 396 LEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLL 455
E+ + + N I A E+G +N+L+ + Q+ + + L +
Sbjct: 345 GEIRLLAKRNVNNRI--CIA---EAGAIPL-----LVNLLSSSDPRTQEHAVTALLNLSI 394
Query: 456 KDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAG 515
++ +A + + + ++ L++ E +E A LF+L+V + + A
Sbjct: 395 HENNKASIVD--SHAIPKIVEVLKTGSME----TRENAAATLFSLSVVDENKVTIGAAGA 448
Query: 516 VIPLLEKMISNS--NSHGAATALYLNLSFLDDAKPIIGSS----HAVPFLVELCKGKTEH 569
+ PL+ + S AATA++ NL K + H + FLV+ G +
Sbjct: 449 IPPLINLLCDGSPRGKKDAATAIF-NLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMID- 506
Query: 570 QCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXG 629
+AL L L+ P + + I L + G P E
Sbjct: 507 ----EALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTE 562
Query: 630 KEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNE 670
+ G+ L + +TG + +A S L L+ NE
Sbjct: 563 QTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQANE 603
Score = 212 (79.7 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 79/286 (27%), Positives = 127/286 (44%)
Query: 432 LNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQE 491
+N L G Q+ E IRLL K + R+ G + L+ L S+ + QE
Sbjct: 329 MNRLRSGNQDEQRAAAGE-IRLLAKRNVNNRICIAEAGAIPLLVNLLSSS----DPRTQE 383
Query: 492 IGAMALFNLAVNNNRNKELMLAAGVIPLLEKMI---SNSNSHGAATALYLNLSFLDDAKP 548
AL NL+++ N NK ++ + IP + +++ S AA L+ +LS +D+ K
Sbjct: 384 HAVTALLNLSIHEN-NKASIVDSHAIPKIVEVLKTGSMETRENAAATLF-SLSVVDENKV 441
Query: 549 IIGSSHAVPFLVEL-CKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
IG++ A+P L+ L C G K DA A++NL N + AGI+ L + V
Sbjct: 442 TIGAAGAIPPLINLLCDGSPRG--KKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVD 499
Query: 608 GDPMWTEKXXXXXXXXXXXXXGKEEM-NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC 666
++ GK + S P + L V+ TG +E A + L+LLC
Sbjct: 500 PTGGMIDEALSLLSILAGNPEGKIVIARSEP--IPPLVEVIKTGSPRNRENAAAILWLLC 557
Query: 667 NGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQ 712
+ + + GV AL +S G+ R + KA +L L + +
Sbjct: 558 SADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQANE 603
Score = 59 (25.8 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 27/125 (21%), Positives = 57/125 (45%)
Query: 20 GDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIALEKAKNILHHCSECSKLYL 79
G + + + L ++ + P L+ P S S + L AL A+++L + SK+
Sbjct: 17 GPLRRPCADLSRRVRLLAPLLD-HLPASSSSSSST-PLADALGAARDLLRKTRDGSKIDQ 74
Query: 80 AITGDSVLLKFEKARSAL---AESLRRVEDIVPQSIGCQILEIVNELETIAFSLDPSEKQ 136
A+ GD+ L +F + ++L +PQ + Q+ + ++ + + DP + Q
Sbjct: 75 AMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALVHSQFQRASTRTDPPDTQ 134
Query: 137 VGDDI 141
+ D+
Sbjct: 135 LSMDL 139
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 221 (82.9 bits), Expect = 5.8e-28, Sum P(3) = 5.8e-28
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P + RCPI+L+LM DPV++A+GQTY+R I+ W+ GH+TCPKT Q L H L PN +K
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALK 334
Query: 340 GLIASWC 346
LI WC
Sbjct: 335 NLIVLWC 341
Score = 122 (48.0 bits), Expect = 5.8e-28, Sum P(3) = 5.8e-28
Identities = 66/285 (23%), Positives = 118/285 (41%)
Query: 432 LNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQE 491
++ L E ++ +V ++R L K D AR G + L+R+L + C + +
Sbjct: 372 VSFLIEKLSVADSNGVVFELRALAKSDTVARACIAEAGAIPKLVRYLATE-CP----SLQ 426
Query: 492 IGAMA-LFNLAVNNNRNKELMLAAGVIP-LLEKMISNSN--SHGAATALYLNLSFLDDAK 547
I A+ + NL++ +M G + ++E + S + + A A +L+ + +
Sbjct: 427 INAVTTILNLSILEQNKTRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYR 486
Query: 548 PIIG-SSHAVPFLVELCK-GKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLA 605
+G + V LV+L K G T K DAL A+ NL N+ + AG++ G A
Sbjct: 487 RRLGRKARVVSGLVDLAKQGPTSS--KRDALVAILNLVAERENVGRFVEAGVM-GAAGDA 543
Query: 606 VPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLL 665
P + G +++ L+ L V+ G +E A + L +
Sbjct: 544 FQELP----EEAVAVVEAVVRRGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTM 599
Query: 666 CN--GNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFR 708
C G+E +M G+ + + G+ RG KA L+ R
Sbjct: 600 CRKGGSELVAEMAAIPGIERVIWEMIGAGTARGGRKAASLMRYLR 644
Score = 99 (39.9 bits), Expect = 5.8e-28, Sum P(3) = 5.8e-28
Identities = 58/203 (28%), Positives = 101/203 (49%)
Query: 32 KIL-SVFPSLEASRPRSKSGIQA----LC--SLHIALEKAKNILHHCSECSKLYLAITGD 84
KIL SVF L PRS+ + + LC + I +++ K+++ CS SKL+L + D
Sbjct: 66 KILASVFDELLL--PRSQLVVYSQSAHLCFEEMQIVMQRIKSLIDDCSRVSKLWLLLQID 123
Query: 85 SVLLKFEKARSALAESLRRVEDIVPQ---SIGCQILEIVNEL-----ETIAF--SLDPSE 134
V F + L L V DI+P + ++++ L +++ F + D +
Sbjct: 124 IVAFNFHE----LVTDLSTVLDILPLHDFDLSDDAQDLISLLTKQCSDSVQFVDARDVAL 179
Query: 135 KQVGDDIIALLQQGRKFNDSNDNNEL-ESFHQAATRLGITSSRAALTERRALKKLIERAR 193
++ D IA G K S D++ L + F+ LG++ S A+LT+ +++L + +
Sbjct: 180 RRKVTDTIA----GIKHQISPDHSTLIKIFND----LGLSDS-ASLTDE--IQRLEDEIQ 228
Query: 194 VEEDKRKESIVAYLLHLMRKYSK 216
+ D R +S A L+ L+R YSK
Sbjct: 229 DQIDDRSKSAAASLIGLVR-YSK 250
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 298 (110.0 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 111/437 (25%), Positives = 191/437 (43%)
Query: 278 LPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYC 337
+PP RCP+S +LM DPVI+ASGQT++R I+KWL +G + CP+T+Q L H L PNY
Sbjct: 238 IPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYT 296
Query: 338 VKGLIASWCEMNGVSVPDSPP---DSLDLNYWRLALSEESTN-SKSNEI-VRSCKLKEMK 392
VK +IASW E N +++ + D D + + + N ++S +RS L
Sbjct: 297 VKAMIASWLEANRINLATNSCHQYDGGDASSMANNMGSQDFNRTESFRFSLRSSSLTSRS 356
Query: 393 VVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIR 452
LE E+ + N ++ + +FE + + C++V +
Sbjct: 357 --SLETGNGFEKLKINVSASLCGESQSKDLEIFELLSPGQSYTHSRSE--SVCSVVSSVD 412
Query: 453 LLLKDDEEARVFTG--ANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKEL 510
+ E G + ++ + LES+ N+ E A + +V++ +
Sbjct: 413 YVPSVTHETESILGNHQSSSEMSPKKNLESS----NNVNHEHSAAKTYECSVHDLDDSGT 468
Query: 511 MLAAGVIPLLEKMISNSN---SHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKT 567
M + I L+E + S SN + AA +L ++ +++ + IG A+ L+ L +
Sbjct: 469 MTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIEN-RVHIGRCGAITPLLSLLYSE- 526
Query: 568 EHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXX 627
E + A+ AL NLS N ++ G I L + G+ E
Sbjct: 527 EKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQ 586
Query: 628 XGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVS 687
+E + + + L +L G ++ A S LF L ++ ++V Q + LV
Sbjct: 587 VNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIV-QAKAVKYLVE 645
Query: 688 ISVNGSTRGRDKAQRLL 704
+ ++ DKA LL
Sbjct: 646 L-LDPDLEMVDKAVALL 661
Score = 277 (102.6 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 101/322 (31%), Positives = 144/322 (44%)
Query: 396 LEVSGTI--EESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRL 453
LE S + E S E D+SG + L G N K +IR
Sbjct: 440 LESSNNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNK-VKTAAAAEIRH 498
Query: 454 LLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLA 513
L + E RV G G + LL L S QE AL NL+++ NK +++
Sbjct: 499 LTINSIENRVHIGRCGAITPLLSLLYS----EEKLTQEHAVTALLNLSISE-LNKAMIVE 553
Query: 514 AGVIPLLEKMISNSNSHG---AATALYLNLSFLDDAKPIIGSSHA-VPFLVELCKGKTEH 569
G I L +++ N +A +L+ +LS L + IG S+A + LV L GK
Sbjct: 554 VGAIEPLVHVLNTGNDRAKENSAASLF-SLSVLQVNRERIGQSNAAIQALVNLL-GKGTF 611
Query: 570 QCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXG 629
+ K DA AL+NLS N ++ A + L L P D +K G
Sbjct: 612 RGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDP-DLEMVDKAVALLANLSAVGEG 670
Query: 630 KEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSIS 689
++ + G+ + TV D G +E A S L LC + K C +VLQEG IP LV++S
Sbjct: 671 RQAIVREGGIPLLVETV-DLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALS 729
Query: 690 VNGSTRGRDKAQRLLMLFREQR 711
+G+ R ++KAQ+LL FR QR
Sbjct: 730 QSGTQRAKEKAQQLLSHFRNQR 751
Score = 70 (29.7 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 57 LHIALEKAKNILHHCS-ECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQ 115
L + +A+ L S + SKL+ + +L K + ++ L ++ P + Q
Sbjct: 69 LDSVVNQAREFLEDWSPKLSKLFGVFQCEVLLGKVQTCSLEISRILLQLSQSSPVTSSVQ 128
Query: 116 ILEIVNELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSS 175
+E + ET +F + + ++ ++ AL Q S DNN LES Q LG+ S+
Sbjct: 129 SVERCVQ-ETESFKQEGTLMELMEN--ALRNQKDDIT-SLDNNHLESIIQM---LGLISN 181
Query: 176 RAALTERRALKKLIERARVEEDKRKESI 203
+ L E ++K ER R + K +E +
Sbjct: 182 QDLLKESITVEK--ERIRSQASKSEEDM 207
Score = 38 (18.4 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 8/38 (21%), Positives = 20/38 (52%)
Query: 32 KILSVFPSLEASRPRSKSGIQALCSLHIALEKAKNILH 69
K L +F L + + S +++CS+ +++ ++ H
Sbjct: 382 KDLEIFELLSPGQSYTHSRSESVCSVVSSVDYVPSVTH 419
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 318 (117.0 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 124/437 (28%), Positives = 193/437 (44%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P + RC +SL+LM DPVI+ASGQT+ER+ I+KW+ G CPKT+Q L H LTPN+ V+
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWR--LALSEESTNSKSNEIVRSCKL--KEMKVV- 394
+ASWCE N V PPD L+L + L ES + S+E S L +E++ V
Sbjct: 301 AFLASWCETNNVY----PPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVF 356
Query: 395 --PLEVSGTIEESEYNDIENIYAQEDES--GNNVFERYQDFLNVLNEGENLGQKCNIVEQ 450
G + E N A D S +N ++ + + + G I
Sbjct: 357 SRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGI-------IPAT 409
Query: 451 IRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKEL 510
+R E TG++ + ++ L + + Q + LA N+ N+ +
Sbjct: 410 VR-------E----TGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIV 458
Query: 511 MLAAGVIPLLEKMISNSNSHGAATAL--YLNLSFLDDAKPIIGSSHAVPFLVELCKGKTE 568
+ IP L ++ +++ A A+ LNLS D+ K +I S A+ L+ + K
Sbjct: 459 IARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYL 518
Query: 569 HQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXX 628
+ K ++ L++LS I + AG I L L G +
Sbjct: 519 EEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHE 578
Query: 629 GKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSI 688
K ++ G V L ++D + E+AV L L E + +EG IP LV +
Sbjct: 579 NKTKVIEA-GAVRYLVELMDPAFGMV-EKAVVVLANLATVREGKIA-IGEEGGIPVLVEV 635
Query: 689 SVNGSTRGRDKAQRLLM 705
GS RG++ A L+
Sbjct: 636 VELGSARGKENATAALL 652
Score = 273 (101.2 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 88/302 (29%), Positives = 149/302 (49%)
Query: 416 QEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALL 475
+E S +++ + ++ L + +L + +IR+L ++ + R+ + +L+
Sbjct: 411 RETGSSSSIETEVKKLIDDL-KSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLV 469
Query: 476 RFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAG-VIPLLEKM----ISNSNSH 530
L S ER Q L NL++N+N NK L+ +G ++PL+ + + + ++
Sbjct: 470 SLLYSTD-ER---IQADAVTCLLNLSINDN-NKSLIAESGAIVPLIHVLKTGYLEEAKAN 524
Query: 531 GAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIP 590
AAT L+ +LS +++ K IG + A+ LV+L G K DA AL+NLS N
Sbjct: 525 SAAT-LF-SLSVIEEYKTEIGEAGAIEPLVDLL-GSGSLSGKKDAATALFNLSIHHENKT 581
Query: 591 NLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTG 650
++ AG + L L P M EK GK + G + L V++ G
Sbjct: 582 KVIEAGAVRYLVELMDPAFGM-VEKAVVVLANLATVREGKIAIGEEGG-IPVLVEVVELG 639
Query: 651 ELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQ 710
+E A + L LC + K C V++EGVIP LV+++ +G+ RG++KAQ LL F+
Sbjct: 640 SARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAH 699
Query: 711 RQ 712
RQ
Sbjct: 700 RQ 701
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 277 (102.6 bits), Expect = 7.8e-25, Sum P(2) = 7.8e-25
Identities = 54/120 (45%), Positives = 76/120 (63%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P E CPI+L++M DPVIIA+GQTYE+ I+KW GH TCPKT+Q+L HL L PN+ +K
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALK 350
Query: 340 GLIASWCEMNGVSVPDSP--PDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLE 397
LI WCE N +P+ PDS + ++L E+ +S E R +K+M+++ E
Sbjct: 351 NLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRR-SVKQMRLLARE 409
Score = 235 (87.8 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 86/307 (28%), Positives = 140/307 (45%)
Query: 412 NIYAQEDESGNNVFERYQDFLNVLNEG---ENLGQKCNIVEQIRLLLKDDEEARVFTGAN 468
N E E + +D +++L E L ++ V+Q+RLL +++ E RV
Sbjct: 361 NFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANA 420
Query: 469 GFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN 528
G + L++ L +S QE L NL+++ NK+L+ G IP + +++ N N
Sbjct: 421 GAIPLLVQLLSYP----DSGIQENAVTTLLNLSIDEV-NKKLISNEGAIPNIIEILENGN 475
Query: 529 SHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTI 585
+A AL+ +LS LD+ K IG S+ +P LV+L + T K DAL AL+NLS
Sbjct: 476 REARENSAAALF-SLSMLDENKVTIGLSNGIPPLVDLLQHGTLRG-KKDALTALFNLSLN 533
Query: 586 PSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLAT 645
+N + AGI+ L +L + ++ G++ + + L
Sbjct: 534 SANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQL-SFIETLVE 592
Query: 646 VLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLM 705
+ G +E A S L L + N LQ GV LV I+ +G+ R + KA L+
Sbjct: 593 FIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQ 652
Query: 706 LFREQRQ 712
L + Q
Sbjct: 653 LISKSEQ 659
Score = 87 (35.7 bits), Expect = 7.8e-25, Sum P(2) = 7.8e-25
Identities = 41/182 (22%), Positives = 82/182 (45%)
Query: 45 PRSKSGIQALCSLHIALEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRV 104
P K + L + +A AK +L CS SK+Y+A+ G++++ +F ++ E L RV
Sbjct: 101 PSCKHFLNRLRKVFLA---AKKLLETCSNGSKIYMALDGETMMTRFH----SIYEKLNRV 153
Query: 105 EDIVPQSIGCQILEIVNELETIAFSLDPSEKQVG-DDIIALLQQGRKFNDSNDNN-ELES 162
P + +E++++ L ++++ DI + F+ ++ N +
Sbjct: 154 LVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQDIELAVDMMVVFSKTDPRNADSAI 213
Query: 163 FHQAATRLGITSSRAALTERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEM 222
+ A +L + + TE A++ LI+ + K+ I+ L+ K+ KL E
Sbjct: 214 IERLAKKLELQTIDDLKTETIAIQSLIQDKGGLNIETKQHII----ELLNKFKKLQGLEA 269
Query: 223 ID 224
D
Sbjct: 270 TD 271
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 226 (84.6 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 77/301 (25%), Positives = 136/301 (45%)
Query: 414 YAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVA 473
++ D S + + ++ N L + + ++ +R + + E+ RV +
Sbjct: 222 FSSTDHSSSPMSPEEEEIFNKLRGTDIFDHEQGLI-LLRKMTRSSEDLRVSLCTD----R 276
Query: 474 LLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHG-- 531
+L FL S + R + Q A ++ NL++ +NK ++ +G +PLL ++ + +
Sbjct: 277 ILSFLRSLLVSRYNLVQTNAAASVVNLSLEK-QNKVKIVRSGFVPLLIDVLKSGTTEAQE 335
Query: 532 -AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIP 590
A AL+ +L+ D+ K +IG AV L+ + + + DA ALY+LS IPSN
Sbjct: 336 HVAGALF-SLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRT 394
Query: 591 NLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEM---NSTPGLVSGLATVL 647
L+ AG + L S+ GD T + GK M N+ LV L V
Sbjct: 395 RLVRAGAVPTLLSMVRSGDS--TSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVG 452
Query: 648 DTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLF 707
+E V+ L LC GN + + + G L+ + NG+ R ++KA ++L+
Sbjct: 453 GGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKILLAM 512
Query: 708 R 708
R
Sbjct: 513 R 513
Score = 134 (52.2 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLC-LTPNYC 337
PPE L CPI+ LM DPV+++SGQT+ER+ ++ + G+ P L + PN
Sbjct: 32 PPEFL-CPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIP-DLLDGTRPDLSTVIPNLA 89
Query: 338 VKGLIASWCEMNGVSVPDSPPDS 360
+K I SWC+ V P PPD+
Sbjct: 90 MKSTIFSWCDRQKVDHP-RPPDA 111
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 298 (110.0 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 100/341 (29%), Positives = 158/341 (46%)
Query: 277 PLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNY 336
P+ PE RCPISL+LM DPVI+++GQTYER I+KWL GH TCPK+Q+ L H LTPNY
Sbjct: 246 PVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNY 305
Query: 337 CVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPL 396
+K LIA WCE NG+ +P + + + S S++ R+ L ++ +
Sbjct: 306 VLKSLIALWCESNGIELPQNQGS---------CRTTKIGGSSSSDCDRTFVLSLLEKL-- 354
Query: 397 EVSGTIEESEY--NDIENIYAQEDESGNNVFER--YQDFLNVLNEGENLGQKCNIVEQIR 452
+GT E+ ++ + + ++ + E + +L+ + Q+ ++ +
Sbjct: 355 -ANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLN 413
Query: 453 LLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELML 512
L + + + + G + ++ L++ E A+E A LF+L+V + NK +
Sbjct: 414 LSINEGNKGAIVDA--GAITDIVEVLKNGSME----ARENAAATLFSLSVIDE-NKVAIG 466
Query: 513 AAGVIPLLEKMISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEH 569
AAG I L ++ G AATA++ NL K V L L K
Sbjct: 467 AAGAIQALISLLEEGTRRGKKDAATAIF-NLCIYQGNKSRAVKGGIVDPLTRLLKDAGGG 525
Query: 570 QCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDP 610
+AL L LST + A I L + G P
Sbjct: 526 MVD-EALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSP 565
Score = 210 (79.0 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 73/265 (27%), Positives = 117/265 (44%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 509
++RLL K + + RV G + L+ L S + QE AL NL++N NK
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLSSP----DPRTQEHSVTALLNLSINEG-NKG 422
Query: 510 LMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKT 567
++ AG I + +++ N + A A +LS +D+ K IG++ A+ L+ L + T
Sbjct: 423 AIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGT 482
Query: 568 EHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXX 627
K DA A++NL N + GI+ L L ++
Sbjct: 483 RRG-KKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQ 541
Query: 628 XGKE---EMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPA 684
GK E S P LV ++ TG +E A + L+ LC GN + + + G A
Sbjct: 542 EGKTAIAEAESIPVLVE----IIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVA 597
Query: 685 LVSISVNGSTRGRDKAQRLLMLFRE 709
L ++ NG+ R + KA LL L ++
Sbjct: 598 LKELTENGTDRAKRKAASLLELIQQ 622
Score = 56 (24.8 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 26/130 (20%), Positives = 59/130 (45%)
Query: 17 KLHGDMCKKLSALYCKILSVF--PSLEASRPRSKSGIQALCSLHIALEKAKNILHHCSEC 74
K+ GD+ ++++ +LS F ++ + K I ++ IAL+ + + +
Sbjct: 35 KIQGDLVRRIT-----LLSPFFEELIDVNVELKKDQITGFEAMRIALDSSLELFRSVNGG 89
Query: 75 SKLYLAITGDSVLLKFEKARSALAESLRRV--EDI-VPQSIGCQILEIVNELETIAFSLD 131
SKL+ DS++ KF + +L ++ E I V + + Q+ + + + +
Sbjct: 90 SKLFQLFDRDSLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWE 149
Query: 132 PSEKQVGDDI 141
S+ Q+ D+
Sbjct: 150 ESDLQLSHDL 159
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 292 (107.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 94/281 (33%), Positives = 143/281 (50%)
Query: 435 LNEGENLGQKCNIVEQIRLLLKDDEEARV-FTGANGFVVALLRFLESAVCERNSYAQEIG 493
L E+ + ++IR L K R F+ A +V++LRF +S S+ E
Sbjct: 72 LIRSEDCDSRLFAAKEIRRLTKTSHRCRRHFSQAVEPLVSMLRF-DSP----ESH-HEAA 125
Query: 494 AMALFNLAVNNNRNKELMLAAGVI-PLLEKMISNSNS-HGAATALYLNLSFLDDAKPIIG 551
+AL NLAV + +NK ++ AG + P++ + SNS + A+A L LS + KPIIG
Sbjct: 126 LLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIG 185
Query: 552 SSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPM 611
++ VP LV++ K + Q K DA+ AL NLST+P N+ +L+ +S + +L
Sbjct: 186 ANGVVPLLVKVIKHGSP-QAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKS 244
Query: 612 WTEKXXXXXXXXXXXXXGKEEMN---STPGLVSGLATVLDTGELIEQEQAVSCLFLLCNG 668
G+E S G V + VL+ G L +E AV L LC
Sbjct: 245 SKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQS 304
Query: 669 NE-KCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFR 708
+ K + +L+EGVIP L+ ++V G+++ R KAQRLL L R
Sbjct: 305 DRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLR 345
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 284 (105.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 76/251 (30%), Positives = 127/251 (50%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
PEE RCP+S +LM DPV++ASGQTY+++ I+KWLS G+ TCPKTQQ LPH LTPN ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 340 GLIASWCEMNGVSVPDS-PPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEV 398
+I+ WC+ NG+ P+ ++ + E NS + V S L++ K E+
Sbjct: 135 EMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCK-VSSSNLQDQKSAAKEL 193
Query: 399 SGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDD 458
+ + ++ ES + + L+ N E L Q+ + + + + DD
Sbjct: 194 RLLTRKG--TEFRALFG---ESPDEITRLVNPLLHGSNPDEKL-QEDVVTTLLNISIHDD 247
Query: 459 EEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVI- 517
++ + L+ L S A A A+F L+ ++ NK L+ +G++
Sbjct: 248 SNKKLVCENPNVIPLLIDALRRGTVATRSNA----AAAIFTLSALDS-NKVLIGKSGILK 302
Query: 518 PLLEKMISNSN 528
PL++ ++ N
Sbjct: 303 PLID-LLEEGN 312
Score = 48 (22.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 638 GLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNG 692
G++ L +L+ G + + + +F LC +E + V ++G + L NG
Sbjct: 299 GILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAV-RDGAVRVLGKKISNG 352
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 263 (97.6 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 99/386 (25%), Positives = 165/386 (42%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P++ CPISL LM DPVII++GQTY+R I +W+ +GH TCPKT Q L + PN +K
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALK 365
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 399
LI WC +G+S DS + ++ AL ++ ++N+ S +K + + +
Sbjct: 366 NLIVQWCTASGISYESEFTDSPNESF-ASALPTKAA-VEANKATVSILIKYL-ADGSQAA 422
Query: 400 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDE 459
T+ E + +E+ + +L + Q+ ++ + L + +
Sbjct: 423 QTVAAREIRLLAKT-GKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKN 481
Query: 460 EARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPL 519
++R+ + + +++ L S + AQE A LF+L+ + K + + +
Sbjct: 482 KSRIMEEGD-CLESIVSVLVSGLTVE---AQENAAATLFSLSAVHEYKKRIAIVDQCVEA 537
Query: 520 LEKMISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDAL 576
L ++ N G A TALY NLS D + V LV K + + AL
Sbjct: 538 LALLLQNGTPRGKKDAVTALY-NLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGAL 596
Query: 577 HALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGK--EEMN 634
L S I SA ++GL + G P E E++
Sbjct: 597 ALLVRQSLGAEAIGKEDSA--VAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVL 654
Query: 635 STPGLVSGLATVLDTGELIEQEQAVS 660
P + L T+L TG + +A S
Sbjct: 655 RAPAIAGLLQTLLFTGTKRARRKAAS 680
Score = 208 (78.3 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 91/343 (26%), Positives = 145/343 (42%)
Query: 380 NEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVL---- 435
+ IV + LK + V SG ESE+ D N E + +++L
Sbjct: 356 SRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYL 415
Query: 436 NEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAM 495
+G Q +IRLL K +E R + G + L R L S N+ AQE
Sbjct: 416 ADGSQAAQTV-AAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTS----ENAIAQENSVT 470
Query: 496 ALFNLAVNNNRNKELMLAAG-----VIPLLEKMISNSNSHGAATALYLNLSFLDDAKPII 550
A+ NL++ +NK ++ G ++ +L ++ AA L+ +LS + + K I
Sbjct: 471 AMLNLSIYE-KNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLF-SLSAVHEYKKRI 528
Query: 551 GS-SHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGD 609
V L L + T K DA+ ALYNLST P N ++ G +S L A+ +
Sbjct: 529 AIVDQCVEALALLLQNGTPRG-KKDAVTALYNLSTHPDNCSRMIEGGGVSSLVG-ALKNE 586
Query: 610 PMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC-NG 668
+ E+ G E + V+GL ++ G +E AV+ L LC +G
Sbjct: 587 GV-AEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSG 645
Query: 669 NEKCCQMVLQEGVIPALV-SISVNGSTRGRDKAQRLLMLFREQ 710
+ VL+ I L+ ++ G+ R R KA L +F+ +
Sbjct: 646 GAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQRR 688
Score = 77 (32.2 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 35/158 (22%), Positives = 72/158 (45%)
Query: 43 SRPRSKSGIQA----LC--SLHIALEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSA 96
+R RSKS + LC L++ L ++K ++ +C++ SKL+L + S+ F
Sbjct: 90 ARRRSKSSVSESTALLCLKELYLLLYRSKILVDYCAQSSKLWLLLQNPSISGYFHDLNQE 149
Query: 97 LAESLRRVEDIVP-QSIGCQILEIVNELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSN 155
++ L D++P +G +I ++E + + + + +L + F D
Sbjct: 150 ISTLL----DVLPVNDLGLSD-DIREQIELLQRQSRKARLYIDKNDESLRESFYSFLDGF 204
Query: 156 DNNELESFHQA----ATRLGITSSRAALTERRALKKLI 189
+N ++ S +LGI S++ +E L++ I
Sbjct: 205 ENGKIPSSVDLRMFFVEKLGIRDSKSCRSEIEFLEEQI 242
Score = 41 (19.5 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 191 RARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGS 231
RAR K S LL L Y L+RS+++ D +Q S
Sbjct: 89 RAR-RRSKSSVSESTALLCLKELYLLLYRSKILVDYCAQSS 128
Score = 40 (19.1 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 108 VPQSIGCQILEIVNELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAA 167
V Q IG + + + SLD + D +I + G+ ++ ++ +E H
Sbjct: 294 VAQEIGDTFITVPKDF-VCPISLD----LMTDPVI--ISTGQTYDRNSIARWIEEGHCTC 346
Query: 168 TRLGITSSRAALTERRALKKLI 189
+ G + + RALK LI
Sbjct: 347 PKTGQMLMDSRIVPNRALKNLI 368
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 178 (67.7 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 37/82 (45%), Positives = 47/82 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E C +S +M +PVIIASGQTYE+ I +WL TCPKT+Q L H PN+ +
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLIS 131
Query: 340 GLIASWCEMNGVSVPDSPPDSL 361
LI WC +N P D L
Sbjct: 132 DLITQWCLVNKYD-HQKPSDEL 152
Score = 147 (56.8 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 73/308 (23%), Positives = 126/308 (40%)
Query: 412 NIYAQEDESGNNVFERYQDFLNVL----NEGENLGQKCNIVEQIRLLLKDDEEARVF--T 465
N Y + S V E + + L + ++ + +++R K RVF
Sbjct: 141 NKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKELRHQTKKFPNVRVFFVA 200
Query: 466 GANGFVVALLR---FLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEK 522
G + + LL L+ AV + + QE ALFNL++ + + VIPLL K
Sbjct: 201 GIHDSITRLLSPLSTLDEAV-DSSLELQENIVTALFNLSILESNKTVIAENCLVIPLLTK 259
Query: 523 MISNSNSHGA--ATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALY 580
+ A A +LS +D K IIG+S AV L++L + + + +A ++
Sbjct: 260 SLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIE-EGDLLATKEATSTVF 318
Query: 581 NLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLV 640
NL + N ++SAG+I G + ++ EEM+ G +
Sbjct: 319 NLCIVLENKGKVVSAGLIHAATKKIKAGSNV--DELLSLLALISTHNRAVEEMDKL-GFI 375
Query: 641 SGLATVL-DTGELIEQEQAVSCLFLLCNGNEKCCQMVL---QEGVIPALVSISVNGSTRG 696
L ++L L+ E AV +F + + N ++ + +E ++ GS R
Sbjct: 376 YDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLKVVGEEENQHGTFTKLAKQGSVRA 435
Query: 697 RDKAQRLL 704
KAQ +L
Sbjct: 436 ARKAQGIL 443
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 168 (64.2 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 29/71 (40%), Positives = 48/71 (67%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHL-CLTPNYCV 338
P + RCPISL++M DPVI+ SG T++R+ I++W+ G+ TCP T+ L L PN+ +
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 339 KGLIASWCEMN 349
+ LI ++ ++
Sbjct: 66 RSLILNFAHVS 76
Score = 154 (59.3 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 72/274 (26%), Positives = 115/274 (41%)
Query: 434 VLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIG 493
V N + ++ +RL +D R T +G V A L ++S C N QE
Sbjct: 102 VSQSSSNASKLESLTRLVRLTKRDSSIRRKVT-ESGAVRAALDCVDS--C--NQVLQEKS 156
Query: 494 AMALFNLAVNNNRNKELMLAAGVIPLLEKM--ISNSNSHGAATALYLNLSFLDDAKPIIG 551
L NL++ ++ NK ++A GVI + + + + + A L +L+ ++ K IG
Sbjct: 157 LSLLLNLSLEDD-NKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIG 215
Query: 552 S-SHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDP 610
S A+ LV L + + + K A ALY L + P N ++ G + L A G
Sbjct: 216 SYPDAISALVSLLRVGNDRERKESAT-ALYALCSFPDNRKRVVDCGSVPILVEAADSG-- 272
Query: 611 MWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNE 670
E+ G+EEM+ G V L VL G L + ++ L LC +
Sbjct: 273 --LERAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSG 330
Query: 671 KCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLL 704
+ V +EGV+ N S + R A L+
Sbjct: 331 EIVDEVKREGVVEICFGFEDNESEKIRRNATILV 364
Score = 95 (38.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 40/178 (22%), Positives = 77/178 (43%)
Query: 519 LLEKMISNSNSHGAATALYLNLSFLDDA-KPIIGSSHAVPFLVELCKGKTEHQCKLDALH 577
L+ + SN++ + T L + L+ D + + + S AV ++ C + +L
Sbjct: 101 LVSQSSSNASKLESLTRL-VRLTKRDSSIRRKVTESGAVRAALD-CVDSCNQVLQEKSLS 158
Query: 578 ALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTP 637
L NLS N L++ G+I + ++ G P K + S P
Sbjct: 159 LLLNLSLEDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYP 218
Query: 638 GLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTR 695
+S L ++L G E++++ + L+ LC+ + + V+ G +P LV + +G R
Sbjct: 219 DAISALVSLLRVGNDRERKESATALYALCSFPDNR-KRVVDCGSVPILVEAADSGLER 275
Score = 69 (29.3 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 50/216 (23%), Positives = 87/216 (40%)
Query: 353 VPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESE-YNDIE 411
+P+ SL LN+ ++L E S E S + + + S + E +
Sbjct: 60 IPNHALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLV 119
Query: 412 NIYAQEDESGNNVFER--YQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEAR-VFTGAN 468
+ ++ V E + L+ ++ + Q+ ++ + L L+DD + V G
Sbjct: 120 RLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGVI 179
Query: 469 GFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN 528
+V +LR + S C+ I A L +LAV + I L ++ N
Sbjct: 180 RRIVTVLR-VGSPDCKA------IAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGN 232
Query: 529 SHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVE 561
+ATALY SF D+ K ++ +VP LVE
Sbjct: 233 DRERKESATALYALCSFPDNRKRVVDCG-SVPILVE 267
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 169 (64.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 269 NNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKT---QQ 325
++R+ Q PP E CPIS +M DPV+++SGQT+ER+C++ + + PK ++
Sbjct: 23 SSRQQQQEQQPPVEFLCPISKSVMSDPVVVSSGQTFERVCVQ--VCRDLNFIPKLNDDEE 80
Query: 326 KLPHLC-LTPNYCVKGLIASWCEMNGVSVPDSPPD 359
LP + PN +K I +WC+ GVS P PPD
Sbjct: 81 SLPDFSNIIPNLNMKSTIDTWCDTVGVSRPQ-PPD 114
Score = 159 (61.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 78/338 (23%), Positives = 142/338 (42%)
Query: 405 SEYNDIENI--YAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEAR 462
S ++IE + + S + E + N L E Q+ ++ +R + + ++EAR
Sbjct: 201 SSSSEIETLTHHTFFSNSTSTATEEDEVIYNKLKSSEIFDQEQGLI-MMRKMTRTNDEAR 259
Query: 463 VFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEK 522
V + +L L++ + R S Q +L NL+++ +NK ++ G +P+L
Sbjct: 260 VSLCSP----RILSLLKNMIVSRYSLVQTNALASLVNLSLDK-KNKLTIVRLGFVPILID 314
Query: 523 MISNSN----SHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHA 578
++ + + H A T L+L DD K IG A+ L+ + + + D+ A
Sbjct: 315 VLKSGSREAQEHAAGTIFSLSLE--DDNKMPIGVLGALQPLLHALRAAESDRTRHDSALA 372
Query: 579 LYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEM---NS 635
LY+L+ +N L+ G + L S+ G+ + G+ M N+
Sbjct: 373 LYHLTLNQTNRSKLVRLGAVPALFSMVRSGES--ASRALLVICNLACCSEGRSAMLDANA 430
Query: 636 TPGLVSGLATVLDTGELIE-------QEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSI 688
LV L T E E +E V+ LF L + + + + + + L +
Sbjct: 431 VAILVGKLREEW-TEEPTEARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEV 489
Query: 689 SVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDD 726
G+ R R+KA+++L L RE+ D G D D
Sbjct: 490 EERGTERAREKAKKILQLMRERVPEDDEEDGEGSIDWD 527
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 254 (94.5 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 84/280 (30%), Positives = 135/280 (48%)
Query: 435 LNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGA 494
L+ ++ ++ +IRLL K+ E R+ G + L+ + S+ + QE G
Sbjct: 71 LDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQ----LQEYGV 126
Query: 495 MALFNLAVNNNRNKELMLAAGVI-PLLE--KMISNSNSHGAATALYLNLSFLDDAKPIIG 551
A+ NL++ + NKE + ++G I PL+ KM + + AA AL L LS +++ K IG
Sbjct: 127 TAILNLSLCDE-NKESIASSGAIKPLVRALKMGTPTAKENAACAL-LRLSQIEENKVAIG 184
Query: 552 SSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPM 611
S A+P LV L + + K DA ALY+L + N + +GI+ L L
Sbjct: 185 RSGAIPLLVNLLE-TGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSN 243
Query: 612 WTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEK 671
+K K + G V L +++ G ++E AVS L LC +
Sbjct: 244 MVDKSAFVMSLLMSVPESKPAIVEEGG-VPVLVEIVEVGTQRQKEMAVSILLQLCEESVV 302
Query: 672 CCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQR 711
MV +EG IP LV++S G++R + KA+ L+ L R+ R
Sbjct: 303 YRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPR 342
Score = 42 (19.8 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 148 GRKFNDSNDNNELESFHQA-ATRLGITSSRAALTERRALKKLIERARVEEDKRKESIVAY 206
GRKF+D + N++ +F + R G A +E R L L+ A D +V++
Sbjct: 15 GRKFSDLSLNDDSSAFSDCNSDRSG--EFPTASSESRRL--LLSCASENSDDLINHLVSH 70
Query: 207 L 207
L
Sbjct: 71 L 71
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 272 (100.8 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 99/345 (28%), Positives = 160/345 (46%)
Query: 373 ESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFL 432
E T+ KS ++ C L + V +V T+++ E ++ +E +S E D
Sbjct: 100 EETSKKSEKL---CDLLNLAEVEADVE-TMKKEEALEVLKRVVRELQSAAAAREDNDD-- 153
Query: 433 NVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEI 492
G + +K ++RLL K+D EARV G + L+ ++ + R AQ
Sbjct: 154 -----GGDCRKKITAASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDS---RIVDAQIA 205
Query: 493 GAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHG-----AATALYLNLSFLDDAK 547
AL NL + N+ NK ++ AG + + K+I + N+ A A +L LS LD K
Sbjct: 206 SLYALLNLGIGNDANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNK 265
Query: 548 PIIGSSHAVPFLVELCKGKTE---HQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSL 604
PIIGSS A+ FLV+ + E Q + DAL ALYNLS N+ +L +I+ L L
Sbjct: 266 PIIGSSGAIIFLVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYL--L 323
Query: 605 AVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLD-TGELIEQEQAVSCLF 663
GD +E+ G++ + L VL+ T QE+A L
Sbjct: 324 NTLGDMEVSERILAILSNLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILM 383
Query: 664 LLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFR 708
L+ + Q++++ G+ AL+ +++ GS + +A R+L R
Sbjct: 384 LMAHKGYGDRQVMIEAGIESALLELTLLGSALAQKRASRILECLR 428
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 272 (100.8 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 97/343 (28%), Positives = 164/343 (47%)
Query: 255 DRQLSKLCSFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLS 314
D +L K + N ++++S + +P E+ CPISL+LM DP I+++GQTYER I++W+
Sbjct: 221 DERLEKAVTEN-SDDSQKSDNLTIP-EDFLCPISLELMKDPAIVSTGQTYERSFIQRWID 278
Query: 315 DGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEES 374
G+ +CPKTQQKL + LTPNY ++ LI+ WC + + P + N S+ S
Sbjct: 279 CGNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKN------SDGS 332
Query: 375 TNSKSNEI--VRS--CKLKEMKVVPLEVS-GTIEESEYNDIENIYAQEDESGNNVFERYQ 429
S ++ +R+ CKL + + I +N + V +
Sbjct: 333 FRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKL- 391
Query: 430 DFLNVLNEGENLGQKCNIVEQIRL-LLKDDEEARVFTGANGFVVALLRFLESAVCERNSY 488
+ ++G+ Q+ + + L + + ++E + GA +V +LR + E
Sbjct: 392 ----LTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLR---AGSME---- 440
Query: 489 AQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHG---AATALYLNLSFLDD 545
A+E A LF+L++ + NK ++ A+G I L ++ + G AATAL+ NL
Sbjct: 441 ARENAAATLFSLSLADE-NKIIIGASGAIMALVDLLQYGSVRGKKDAATALF-NLCIYQG 498
Query: 546 AKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSN 588
K G + + L K T+ + A AL LS + SN
Sbjct: 499 NK---GRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASN 538
Score = 186 (70.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 72/283 (25%), Positives = 126/283 (44%)
Query: 439 ENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALF 498
+++ + V +IR L K + R+ G + L++ L S + ++ QE +
Sbjct: 353 QSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTS---DGDTETQENAVTCIL 409
Query: 499 NLAVNNNRNKELMLAAGVIPLLEKMI--SNSNSHGAATALYLNLSFLDDAKPIIGSSHAV 556
NL++ + NKEL++ AG + + ++ + + A A +LS D+ K IIG+S A+
Sbjct: 410 NLSIYEH-NKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAI 468
Query: 557 PFLVELCK-GKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTE 614
LV+L + G K DA AL+NL N + AGI+ L + L +
Sbjct: 469 MALVDLLQYGSVRG--KKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMAD 526
Query: 615 KXXXXXXXXXXXXXGKEEM---NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGN-E 670
+ K + N+ P L+ L + +E A + L LC + E
Sbjct: 527 EALTILSVLASNQVAKTAILRANAIPPLID----CLQKDQPRNRENAAAILLCLCKRDTE 582
Query: 671 KCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQR 713
K + V+P L+ +S +G+ R + KA LL L R+ ++
Sbjct: 583 KLISIGRLGAVVP-LMELSRDGTERAKRKANSLLELLRKSSRK 624
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 267 (99.0 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 84/274 (30%), Positives = 138/274 (50%)
Query: 444 KCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVN 503
K + ++RLL K+ + RV G +G + AL+ L C + + QE AL NL+++
Sbjct: 200 KRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLR---CN-DPWTQEHAVTALLNLSLH 255
Query: 504 NNRNKELMLAAGVIPLLEKMI---SNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLV 560
+ +NK ++ A G I L ++ + ++ AA AL L+L+ L++ K IG+ A+P LV
Sbjct: 256 D-QNKAVIAAGGAIKSLVWVLKTGTETSKQNAACAL-LSLALLEENKGSIGACGAIPPLV 313
Query: 561 ELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXX 620
L + + K DAL LY L T+ N ++AG + L L EK
Sbjct: 314 SLLLNGS-CRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVL 372
Query: 621 XXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEG 680
GKE + G ++ L ++ G + +E A+ L LC+ + + ++++EG
Sbjct: 373 SSLAAIDDGKEAIVEEGG-IAALVEAIEDGSVKGKEFAILTLLQLCSDSVRNRGLLVREG 431
Query: 681 VIPALVSISVNGST--RGRDKAQRLLMLFREQRQ 712
IP LV +S +GS R + KA+RLL RE R+
Sbjct: 432 AIPPLVGLSQSGSVSVRAKRKAERLLGYLREPRK 465
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 263 (97.6 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 87/282 (30%), Positives = 137/282 (48%)
Query: 437 EGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAM- 495
E E +K ++RLL KDD EARV G + L+ ++ E S I ++
Sbjct: 119 EAEAAEKKIAAASEVRLLAKDDIEARVTLAMLGAIPPLVSMIDD---ESQSEDALIASLY 175
Query: 496 ALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--SHGAATAL---YLNLSFLDDAKPII 550
AL NL + N+ NK ++ AGV+ + K++ +S + A A+ +L LS LD KPII
Sbjct: 176 ALLNLGIGNDVNKAAIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPII 235
Query: 551 GSSHAVPFLVELCKGKTE---HQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
GSS A+ FLV+ K E Q + DAL ALYNLS N+ +L +I L L
Sbjct: 236 GSSGAIIFLVKTLKNFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFL--LNTL 293
Query: 608 GDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIE-QEQAVSCLFLLC 666
GD +E+ G++ + L VL+ + I+ QE+AV L L+
Sbjct: 294 GDMEVSERILAILTNVVSVPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLMA 353
Query: 667 NGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFR 708
+ +++ G+ +L+ +++ GS + +A R+L R
Sbjct: 354 HKGYGDRNAMIEAGIESSLLELTLVGSPLAQKRASRVLECLR 395
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 167 (63.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 91/408 (22%), Positives = 175/408 (42%)
Query: 318 STCPKTQQKLPHLCLTPNYC-VKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEES-T 375
S C + + + P P+Y V+G++ + M+ S+P + + ++E S +
Sbjct: 75 SWCDRNKMEHPR---PPDYAYVEGVVRT--RMD--SLPPGSGHRIAKSEILPPVAENSNS 127
Query: 376 NSKSNEI---VRS---CKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDESG-NNVFERY 428
NS + + +RS L +PL + I S I++ ++ D S +
Sbjct: 128 NSDYDSVMGAIRSRSRTSLSSTTSLPLHQTRPINHS--TRIQSSFSTSDYSSFPPMSPEE 185
Query: 429 QDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSY 488
++ N L + + + ++ Q+R + +E R+ + +++LLR S + R +
Sbjct: 186 EEIYNKLTSVDTIDHEQGLI-QLRKTTRSNETTRISLCTDR-ILSLLR---SLIVSRYNI 240
Query: 489 AQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATAL--YLNLSFLDDA 546
Q A ++ NL++ NK ++ +G +PLL ++ + ++ + +L+ ++
Sbjct: 241 VQTNAAASIVNLSLEKP-NKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEEN 299
Query: 547 KPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAV 606
K +IG AV L+ + + + DA ALY+LS IP+N L+ AG + + S+
Sbjct: 300 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIR 359
Query: 607 PGDPMWTEKXXXXXXXXXXXXXGKEEM---NSTPGLVSGLATVLDT-GELIEQEQAVSCL 662
G+ + GK M N+ LV L + +E V L
Sbjct: 360 SGES--ASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGAL 417
Query: 663 FLLCNGNEKCCQMVLQEGVIPALVSI--SVNGSTRGRDKAQRLLMLFR 708
L GN + + + G L I S +GS R ++KA ++L R
Sbjct: 418 LTLSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTLR 465
Score = 147 (56.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKL-PHLC-LTPNYC 337
P E CPI+ LM DPV++ASGQT+ERI ++ + S PK P L + PN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQ--VCRNLSFAPKLHDGTQPDLSTVIPNLA 68
Query: 338 VKGLIASWCEMNGVSVPDSPPD 359
+K I SWC+ N + P PPD
Sbjct: 69 MKSTILSWCDRNKMEHP-RPPD 89
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 256 (95.2 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 96/320 (30%), Positives = 158/320 (49%)
Query: 417 EDESGNNVFERYQDFLNVLNEGENL--GQ---KCNIVEQIRLLLKDD---EEARVFTGAN 468
E+E+ N ++ ++ L +L+ + L G + ++IR LL+ AR
Sbjct: 31 EEETTTNTWKTTKELL-ILHLSKKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADA 89
Query: 469 GFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNK-ELMLAAGVIPLLEKM-ISN 526
G + L+ L S+ N A+ +AL NLAV N RNK E++ A V PL++ + + N
Sbjct: 90 GVIPPLVPMLFSS----NVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHN 145
Query: 527 SNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIP 586
++ ATA L LS K +I SS P L+++ T Q K+DA+ AL+NLS
Sbjct: 146 ASLRELATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGTV-QGKVDAVTALHNLSACK 204
Query: 587 SNIPNLLSAGIISGLQSLA--VPGDPMWTEKXXXXXXXXXXXXX-GKEEMNSTP-GLVSG 642
+L A + L L + EK G+ + S G+++
Sbjct: 205 EYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHSEDGRNAITSCEDGILTL 264
Query: 643 LATVLDTGELIEQEQAVSCLFLLCNGN-EKCCQMVLQEGVIPALVSISVNGSTRGRDKAQ 701
+ TV D G + E AV L LC + +K +++L+EG IP L+S +V+G+++ RD+A+
Sbjct: 265 VETVED-GSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTVDGTSKSRDRAR 323
Query: 702 RLLMLFREQ-RQRDHPPVDI 720
LL L RE R+++ P+ +
Sbjct: 324 VLLDLLRETPREKEMTPLTL 343
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 250 (93.1 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 81/302 (26%), Positives = 146/302 (48%)
Query: 429 QDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSY 488
++ + L ++ ++ +IRLL K+ E R+ G + L+ + S+ +
Sbjct: 63 RNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQ---- 118
Query: 489 AQEIGAMALFNLAVNNNRNKELMLAAGVI-PLLE--KMISNSNSHGAATALYLNLSFLDD 545
QE G A+ NL++ + NKE+++++G + PL+ ++ + + AA AL L LS +++
Sbjct: 119 LQEYGVTAVLNLSLCDE-NKEMIVSSGAVKPLVNALRLGTPTTKENAACAL-LRLSQVEE 176
Query: 546 AKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLA 605
K IG S A+P LV L + + K DA ALY+L + N + +GI+ L L
Sbjct: 177 NKITIGRSGAIPLLVNLLENGG-FRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELM 235
Query: 606 VPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLL 665
+ + +K K + G V L +++ G ++E +VS L L
Sbjct: 236 IDFESDMVDKSAFVMNLLMSAPESKPAVVEEGG-VPVLVEIVEAGTQRQKEISVSILLQL 294
Query: 666 CNGNEKCCQMVLQEGVIPALVSISVNGSTRG-RDKAQRLLMLFREQRQRDHPPVDIGQQD 724
C + MV +EG +P LV++S ++RG + KA+ L+ L R+ RQ+ D
Sbjct: 295 CEESVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQPRQQQQQQQHFESND 354
Query: 725 DD 726
++
Sbjct: 355 NE 356
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 206 (77.6 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 46/112 (41%), Positives = 64/112 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P RCPISL LM DPV I++GQTY+R I+ W++ G++TCP T+ L L PN+ ++
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLR 74
Query: 340 GLIASWC---EMNGVS---VPDSPPDSLDLNYWRLALSEESTNSKSNEIVRS 385
LI WC NGV P P D + + R LS+ S + ++ VRS
Sbjct: 75 RLIQEWCVANRSNGVERIPTPKQPADPISV---RSLLSQASAITGTHVSVRS 123
Score = 95 (38.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 63/278 (22%), Positives = 111/278 (39%)
Query: 448 VEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRN 507
+ ++R L +D E+ RV + L+R L + + E S + E+ + +L L + +
Sbjct: 128 IRRLRGLARDSEKNRVLIAGHNAREILVRILFADI-ETTSLSSELVSESLALLVLLHMTE 186
Query: 508 KELMLAAGV---IPLLEKMISNSNSH---GAATALYLNLSFLD--DAKPIIGSSHAV-PF 558
E A + + +++ +S+ AA + + L+ D K II S ++
Sbjct: 187 TECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEG 246
Query: 559 LVELCKGKTEHQCKLD-ALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTEKX 616
+++L K + L + A++ L + +SAG L LA D TE+
Sbjct: 247 VLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERG 306
Query: 617 XXXXXXXXXXXXG----KEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKC 672
G E + P +V + V D E A L LC E+C
Sbjct: 307 LATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRAT----EYAAGALLALCTAEERC 362
Query: 673 CQMVLQEGVIPALVSISVNGST-RGRDKAQRLLMLFRE 709
G++ L+ + + T R + KAQ LL L R+
Sbjct: 363 RDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRD 400
Score = 57 (25.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 27/108 (25%), Positives = 44/108 (40%)
Query: 451 IRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKEL 510
+ LL + E F G + V L+ V +R A E A AL L R ++
Sbjct: 310 VELLCRLPEGCAAF-GEHALTVPLMVKTILRVSDR---ATEYAAGALLALCTAEERCRDE 365
Query: 511 MLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPF 558
AAG++ L ++ + + A + L L D+ P + H+ F
Sbjct: 366 AAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDF 413
Score = 52 (23.4 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 22/81 (27%), Positives = 34/81 (41%)
Query: 637 PG-LVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTR 695
PG L+ LA D + E+ ++ + LLC E C +P +V + S R
Sbjct: 287 PGILIDRLAADFDR---CDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDR 343
Query: 696 GRDKAQRLLMLF--REQRQRD 714
+ A L+ E+R RD
Sbjct: 344 ATEYAAGALLALCTAEERCRD 364
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 207 (77.9 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 46/110 (41%), Positives = 62/110 (56%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHST-CPKTQQKLPHLCLTPNYCV 338
P RCPISL+LM DPV + +GQTY+R IE W+S G++T CP T+ L L PN+ +
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 339 KGLIASWC---EMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRS 385
+ LI WC NGV +P D R LS+ S + ++ VRS
Sbjct: 75 RRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 124
Score = 88 (36.0 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 59/275 (21%), Positives = 109/275 (39%)
Query: 448 VEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRN 507
+ ++R +D ++ RV A+ L++ L S ++ + + + + N+
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPIT-EPNQF 187
Query: 508 KELMLAAGVIPLLEKMISNSN--SHGAATALYLNLSF---LDDAKPIIGSSHAV-PFLVE 561
+ G + L +++ +S+ + A AL +S D K I +S +V +++
Sbjct: 188 VSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLD 247
Query: 562 LCKGKTEHQCKLD-ALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTEKXXXX 619
L + + L + L+ L ++ S ++AG L LA D TE+
Sbjct: 248 LLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALAT 307
Query: 620 XXXXXXXXXG----KEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQM 675
G E + P LV + V D E A L LC E+ +
Sbjct: 308 VELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRAT----EYAAGALLALCTAEERWREE 363
Query: 676 VLQEGVIPALVSISVNGST-RGRDKAQRLLMLFRE 709
GV+ L+ + + T R + KAQ+LL L R+
Sbjct: 364 AAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRD 398
Score = 57 (25.1 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 28/98 (28%), Positives = 38/98 (38%)
Query: 451 IRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKEL 510
+ LL + E F G + V LL V +R A E A AL L R +E
Sbjct: 308 VELLCRTPEGCAAF-GEHALTVPLLVKTILRVSDR---ATEYAAGALLALCTAEERWREE 363
Query: 511 MLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKP 548
AGV+ L M+ + + A L L D+ P
Sbjct: 364 AAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWP 401
Score = 53 (23.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 639 LVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRD 698
L+ LA D + E+A++ + LLC E C +P LV + S R +
Sbjct: 288 LIDRLAADFDR---CDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATE 344
Query: 699 KAQRLLMLF--REQRQRD 714
A L+ E+R R+
Sbjct: 345 YAAGALLALCTAEERWRE 362
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 253 (94.1 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 107/432 (24%), Positives = 191/432 (44%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPISL LM DPV+ ++GQTY+R I +W+ +GHSTCP + Q L L PN ++
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALR 357
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 399
LI+ WC + G+ DSP + + A ++N+ ++ ++ + S
Sbjct: 358 SLISQWCGVYGLQY-DSPESNEGMAECVAASCSSRAAMEANKATARILVRMLE----DGS 412
Query: 400 GTIEESEYNDIENIYAQEDESGNNVFERYQDFL----NVLNEGENLGQKCNIVEQIRLLL 455
++ +I + A+ + N F + +L + + Q+ + + L +
Sbjct: 413 ENVKAVAAKEIR-LLAKTGKQ-NRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSI 470
Query: 456 KDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAG 515
+ + R+ G + ++ L++ + A+E A LF+L+V +N K +M G
Sbjct: 471 FEPNKGRIME-QEGCLRLIVGVLQNGW---TTEAKENAAATLFSLSVVHNFKKLIMNEPG 526
Query: 516 VIPLLEKMISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCK 572
+ L M++ S G A AL+ NLS ++ + S AV L++ + T +
Sbjct: 527 AVEELASMLTKGTSRGKKDAVMALF-NLSTHPESSARMLESCAVVALIQSLRNDTVSE-- 583
Query: 573 LDALHALYNLSTIPSNIPNLLSAG--IISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGK 630
+A AL L PS I +L+ + +I+ L L G P E
Sbjct: 584 -EAAGALALLMKQPS-IVHLVGSSETVITSLVGLMRRGTPKGKENAVSALYEICRRGGSA 641
Query: 631 --EEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSI 688
+ + PGL + + T+ G +++A S + +C ++ M L G +V
Sbjct: 642 LVQRVAKIPGLNTVIQTITLNGTKRAKKKA-SLIVKMCQRSQMPSAMAL--GSTLTVVDR 698
Query: 689 SVNGSTRGRDKA 700
S+ G+ R A
Sbjct: 699 SLVGNNTLRRAA 710
Score = 181 (68.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 81/290 (27%), Positives = 135/290 (46%)
Query: 432 LNVLNEG-ENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSY-A 489
+ +L +G EN+ K ++IRLL K ++ R F G + L R L S N + A
Sbjct: 405 VRMLEDGSENV--KAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLS-----NDWMA 457
Query: 490 QEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA---ATALYLNLSFLDDA 546
QE AL NL++ +M G + L+ ++ N + A A A +LS + +
Sbjct: 458 QENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNF 517
Query: 547 KPII-GSSHAVPFLVE-LCKGKTEHQCKLDALHALYNLSTIPSNIPNLL-SAGIISGLQS 603
K +I AV L L KG + K DA+ AL+NLST P + +L S +++ +QS
Sbjct: 518 KKLIMNEPGAVEELASMLTKGTSRG--KKDAVMALFNLSTHPESSARMLESCAVVALIQS 575
Query: 604 LAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLF 663
L D + +E+ + S+ +++ L ++ G +E AVS L+
Sbjct: 576 LR--NDTV-SEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPKGKENAVSALY 632
Query: 664 LLCN-GNEKCCQMVLQ-EGVIPALVSISVNGSTRGRDKAQRLL-MLFREQ 710
+C G Q V + G+ + +I++NG+ R + KA ++ M R Q
Sbjct: 633 EICRRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRSQ 682
Score = 42 (19.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 128 FSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALTERRALKK 187
FS S + D ++A G+ ++ + +E H G T + L RAL+
Sbjct: 301 FSCPISLDLMRDPVVA--STGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRS 358
Query: 188 LIER 191
LI +
Sbjct: 359 LISQ 362
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 179 (68.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 41/123 (33%), Positives = 65/123 (52%)
Query: 244 DGVHNGNEHA-FDRQLSKL-CSFNFRPNNRRSGQMPLP-PEELRCPISLQLMYDPVIIAS 300
DG G +H D + L C N S P+ P+E C +S ++M +P++IAS
Sbjct: 29 DG--GGKDHCEIDEAIRILTCLRKIESKNPESDISPVEVPKEFICTLSNKIMIEPMLIAS 86
Query: 301 GQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDS 360
GQT+E+ I +WL TCP+T+Q L H + PN+ + +I WC ++ P + +
Sbjct: 87 GQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIPNHLINEVIKEWCLIHNFDRPKTSDEV 145
Query: 361 LDL 363
+DL
Sbjct: 146 IDL 148
Score = 106 (42.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 47/194 (24%), Positives = 86/194 (44%)
Query: 492 IGAMALFNLAVNNNRNKELMLAAG-VIPLLEKMISN----SNSHGAATALYLNLSFLDDA 546
+ A+ +F+ + +NK L+ V+PLL K + + H AAT +LS+ D
Sbjct: 220 VTALHIFS---TSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVN--SLSYTDSN 274
Query: 547 KPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAV 606
K IIG+S + L+ + + + + +A AL NL + +S G+I
Sbjct: 275 KIIIGNSEVLKALIHVIE-EGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIK 333
Query: 607 PGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVL-DTGELIEQEQAVSCLFLL 665
G + + EEM++ GL+ L ++L ++ L+ E AV ++ +
Sbjct: 334 AGSNV-SMLLSLLAFVSTQNHQTTEEMDNL-GLIYDLFSILRNSNSLVNDENAVVIVYNI 391
Query: 666 CNGNEKCCQMVLQE 679
C + +VL+E
Sbjct: 392 CKSYKALQNVVLRE 405
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 195 (73.7 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 43/109 (39%), Positives = 59/109 (54%)
Query: 256 RQLSKLCSFNFRPNNRRSGQMPLP-PEELRCPISLQLMYDPVIIASGQTYERICIEKWLS 314
R L++L + R S + P+E +C +S +M DPVII SGQTYE+ I +WL+
Sbjct: 50 RILNRLKIVESKKRKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN 109
Query: 315 DGHS-TCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLD 362
H TCP +Q L +CLTPN+ + LI WC N P P +D
Sbjct: 110 --HDLTCPTAKQVLYRVCLTPNHLINELITRWCLANKYDRPAPKPSDID 156
Score = 88 (36.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 55/229 (24%), Positives = 93/229 (40%)
Query: 484 ERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--SHGAATALYLNLS 541
+ N QE ALFN++ L VIPLL K + + + AT +LS
Sbjct: 227 DSNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLS 286
Query: 542 FLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIP-SNIPNLLSAGII-S 599
+D K IIG+S A+ L++L + DAL A+ +L N +S G+ +
Sbjct: 287 DIDSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPA 346
Query: 600 GLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVL-DTGELIEQEQA 658
++++ + E +E N G++ L ++L T ++ E A
Sbjct: 347 AIKNIKARRNLF--ESLAALALISPHERVIQEVANL--GVIYDLLSILRKTSCMVTCENA 402
Query: 659 VSCLF-LLCNGNEKCCQMVL--QEGVIPALVSISVNGSTRGRDKAQRLL 704
V + + E+ + +L +E I+ GS KAQ +L
Sbjct: 403 VVIVGNMYAKSRERSIKKILAEEENQHKTFTKIATQGSVVAVMKAQGIL 451
Score = 53 (23.7 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 33/138 (23%), Positives = 60/138 (43%)
Query: 458 DEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKEL--MLAAG 515
D +FT ++ + S+V ++ A+E+ + V + KEL +
Sbjct: 156 DYVTELFTDGIESLLQRISSPSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRL 215
Query: 516 VIPLL---EKMISNSN-SHGAATALYLNLSFLDDAKPIIGSSHAV-PFLVELCKGKTEHQ 570
+ PL +++ SN TAL+ N+S + K ++ +H V P L + K +
Sbjct: 216 LTPLSVLGDEVDSNPELQENIVTALF-NMSTFEKNKTVLAENHQVIPLLAKSMK-QGSVV 273
Query: 571 CKLDALHALYNLSTIPSN 588
+ +A L +LS I SN
Sbjct: 274 TRRNATLTLASLSDIDSN 291
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 168 (64.2 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 278 LPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYC 337
L E+L CPISL++M DPV+I +G TY+R I KW G+ TCP T + L L N
Sbjct: 287 LKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVS 346
Query: 338 VKGLIASWCEMNGV 351
V+ +I C+ NG+
Sbjct: 347 VRQVIRKHCKTNGI 360
Score = 108 (43.1 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 82/354 (23%), Positives = 142/354 (40%)
Query: 374 STNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLN 433
ST N VR K K + ++G + +D ++ E + + FL
Sbjct: 338 STELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHD--DV-VPESLAAKGAGKLIAKFLT 394
Query: 434 --VLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQE 491
++N GE + + V +IR+ K R G V LL+ L S + QE
Sbjct: 395 SELINGGEEMIYRA--VREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSV----DIRIQE 448
Query: 492 IGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHG---AATALYLNLSFLDDAKP 548
+ NL+ + K + G+ L+E + + + +A+AL+ LS ++D
Sbjct: 449 NAMAGILNLS-KHVTGKSKIAGEGLKILVEILNEGAKTETRLYSASALFY-LSSVEDYSR 506
Query: 549 IIGSS-HAVPFLVELCKGKTE-HQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAV 606
+IG + A+P L+ + KG K AL A+ L N +L+AG + L L
Sbjct: 507 LIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLR 566
Query: 607 PGDPMW--TEKXXXXXXXXXXXXXGKEEMNSTPGL---VSGLATVLDTGELIEQEQAVSC 661
G+ T G + GL V L++ D+ ++Q V
Sbjct: 567 SGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQH-CVGL 625
Query: 662 LFLLC-NGNEKCCQMVLQEG-VIPALVSISVNGSTRGRDKAQRLLMLFREQRQR 713
+ LC NG ++++ V+ +L ++ NG G KA L+ + E ++R
Sbjct: 626 ILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMIHEFQER 679
Score = 84 (34.6 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 38/173 (21%), Positives = 72/173 (41%)
Query: 369 ALSEESTNSKSNEIVRSCKLKEMKVVPL-----EVSGTIEESEYNDIENIYAQEDESGNN 423
A+ E +K++ RSC +K V PL V I+E+ I N+
Sbjct: 408 AVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKI 467
Query: 424 VFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVV-ALLRFLESAV 482
E + + +LNEG + + L ++ +R+ G N + L+ ++
Sbjct: 468 AGEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLI-GENPDAIPGLMNIVKGD- 525
Query: 483 CERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATA 535
+ A+ +A+ L + ++ N +LAAG +P+L ++ + G TA
Sbjct: 526 -DYGDSAKRSALLAVMGLLMQSD-NHWRVLAAGAVPILLDLLRSGEISGGLTA 576
Score = 56 (24.8 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 34/163 (20%), Positives = 71/163 (43%)
Query: 53 ALCSLHIALEKAKNILHHCS-ECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQS 111
+L +H+ +K K +L C+ + ++L + + D V +++ SL +
Sbjct: 91 SLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSLSAFP-VASVD 149
Query: 112 IGCQILEIVNELETIA--FSLDP--SEKQVGDDI--IALLQQGRKFNDSNDNNELESFHQ 165
+ ++ E+++ + A + + P ++K+ I I L R D ++ N + H
Sbjct: 150 LTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINRILALFVNRVVPDPDEINRILD-H- 207
Query: 166 AATRLGITSSRAALTERRALKKLIERARVEEDKRKESIVAYLL 208
+GI + E L + I+ R++E K+K S LL
Sbjct: 208 ----VGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELL 246
Score = 39 (18.8 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 79 LAITGDSVLLK---FEKARSALAESLRRVEDIV 108
+ + GD + K F + + E+LRR+++++
Sbjct: 34 IQLAGDILTFKSKHFSTNKQSFRETLRRIQNLL 66
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 202 (76.2 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 90/336 (26%), Positives = 158/336 (47%)
Query: 281 EELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKG 340
++LRCPISL++M DPV++ SG TY+R I KW + G+ TCPKT + L L N+ VK
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 341 LIASWCEMNGVSVPDSPPDSLDLNYWRLALSEE---STNSKSNEIVRSCKLKEMKVVPLE 397
+I S+ + NGV + +D+ LA E + + E+++ + +EM +E
Sbjct: 340 VIQSYSKQNGVVMGQKGKKKVDVAE-SLAAEEAGKLTAEFLAGELIKGDE-EEMVKALVE 397
Query: 398 VSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKD 457
+ + S + + E+G V E + +L + Q+ N + I L KD
Sbjct: 398 IRILTKTSTF--YRSCLV---EAG--VVE---SLMKILRSDDPRIQE-NAMAGIMNLSKD 446
Query: 458 DEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVI 517
G +G + L+ + + R S ++ A ALF L+ + ++ + + I
Sbjct: 447 IAGKTRIVGEDGGGLRLIVEVLNDGARRES--RQYAAAALFYLSSLGDYSRLIGEISDAI 504
Query: 518 PLLEKMISNSNSHGAA--TALYLNLSFL----DDAKPIIGSSHAVPFLVELCKGKT-EHQ 570
P L +++ + + +A AL S L D+ I+ + VP L++L K +
Sbjct: 505 PGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAAG-IVPVLLDLVKSEEISDG 563
Query: 571 CKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAV 606
D++ L ++ P + ++L G GL+ LAV
Sbjct: 564 VTADSMAILAKMAEYPDGMISVLRRG---GLK-LAV 595
Score = 108 (43.1 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 67/283 (23%), Positives = 118/283 (41%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVN-NNRNK 508
+IR+L K R G V +L++ L S + QE + NL+ + + +
Sbjct: 397 EIRILTKTSTFYRSCLVEAGVVESLMKILRSD----DPRIQENAMAGIMNLSKDIAGKTR 452
Query: 509 ELMLAAGVIPLLEKMISN-----SNSHGAATALYLNLSFLDDAKPIIGS-SHAVPFLVEL 562
+ G + L+ +++++ S + AA YL S L D +IG S A+P LV +
Sbjct: 453 IVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYL--SSLGDYSRLIGEISDAIPGLVRI 510
Query: 563 CKG-KTEHQCKLDALHALYNL-STIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXX 620
K K +AL A+ +L P N +L+AGI+ L L V + +
Sbjct: 511 VKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDL-VKSEEISDGVTADSM 569
Query: 621 XXXXXXXXGKEEMNST--PGLVSGLATVLDTGEL--IEQEQAVSCLFLLCN--GNEKCCQ 674
+ M S G + +L + E+ ++ V+ L LC+ G++
Sbjct: 570 AILAKMAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGS 629
Query: 675 MVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPP 717
+ ++ +L + S NG G KA L+ + E ++R P
Sbjct: 630 LAKNPSIMGSLYTASSNGELGGGKKASALIKMIHEFQERKTGP 672
Score = 73 (30.8 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 43 SRPRSKSGIQALCSLHIALEKAKNILHHCS-ECSKLYLAITGDSVLLKFEKARSALAESL 101
S P +S I +L LH+ +K K +L C+ + +KLY+ + V F +++ SL
Sbjct: 80 SIPAGRSVILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSL 139
Score = 47 (21.6 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 360 SLDLNYWRLALSEESTNSKSNEIVR 384
++D YW L E N S+EI+R
Sbjct: 178 AIDSVYWFFNLFENRINPNSDEILR 202
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 66/241 (27%), Positives = 113/241 (46%)
Query: 474 LLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA- 532
LL L+S C E+ AL +LA + RNK ++ +G +P L +++ +
Sbjct: 44 LLSMLQSQDC----ITTEVALSALLSLAFGSERNKVRIVKSGAVPTLLEILQSETKMVVL 99
Query: 533 --ATALYLNLSFLDDAKPIIGSSHAVPFLVELCK-GKTEHQCKLDALHALYNLSTIPSNI 589
A A L LS + K + S+ V LV L + Q K+D + L NLST+ +
Sbjct: 100 ELAMAFLLILSSCNKNKVKMASTRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQIV 159
Query: 590 PNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVLDT 649
P ++++G L + D E ++S G + L ++
Sbjct: 160 PLVIASGAPYALLQVINFCDKSSELADKAVALLENIISHSPESVSSIGGAIGVLVEAIEE 219
Query: 650 GELIEQEQAVSCLFLLCNGNEKCCQ-MVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFR 708
G +E AV L +CN + + + M+L+EGV+P L+ +SV+G+ R ++ A+ LL+L R
Sbjct: 220 GSAQCKEHAVGILLGICNNDRETNRGMILREGVMPGLLQVSVDGTRRAKEMARELLLLLR 279
Query: 709 E 709
+
Sbjct: 280 D 280
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 210 (79.0 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 64/206 (31%), Positives = 110/206 (53%)
Query: 275 QMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGH-STCPKTQQKLPHLCLT 333
++ +PP L CPISL++M DPVI+++G TY+R IEKWL G ++CP T+Q + LT
Sbjct: 9 EIEIPPFFL-CPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 334 PNYCVKGLIASWCEMN---GVS-VPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLK 389
PN+ ++ LI SWC +N GV +P P +L +S +S N++ C LK
Sbjct: 68 PNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLI--RDSASSHENQV--KC-LK 122
Query: 390 EMKVVPLEVSGT---IEESEYND-IENIYAQEDESGN------NVFERYQDFLNVLNEGE 439
++ + E + +E + + + NI + + E+G+ N+ + VL
Sbjct: 123 RLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLL 182
Query: 440 NLGQKCNIVEQI-RLLLKDDEEARVF 464
N + NIV+ + +++ + E+RV+
Sbjct: 183 NNKKDNNIVKSLTKIMQRGMYESRVY 208
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 135 (52.6 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 37/105 (35%), Positives = 50/105 (47%)
Query: 269 NNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLP 328
NN + +P E L CPIS LM DP+I++SG +YER C+ + G + P
Sbjct: 49 NNNSPTKTEIPAEFL-CPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPDFST- 106
Query: 329 HLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEE 373
+ PN +K I SWCE P P +S LAL E+
Sbjct: 107 ---VIPNLALKSAIHSWCERRCFP-PPKPLNSAAAEKLILALMEK 147
Score = 122 (48.0 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 79/371 (21%), Positives = 156/371 (42%)
Query: 352 SVPDSPPDSLDLNYWRLALSEEST--NSKSNE-IVRSCKLKEMKVVPLEVSGTIEESEYN 408
++ D P S+ LN+ L NS S+E I S + ++ P S E
Sbjct: 164 AIRDKP--SVRLNHAATELDRRPNYFNSSSDESIASSSRTLQLTTKPSCFSSP-SSGEIE 220
Query: 409 DIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGAN 468
+E E+E+ + + + N ++E E + IR + + DE +R+
Sbjct: 221 SLEPNLTPEEEA---LLTKLKS--NRISEIEEA------LISIRRITRIDESSRISLCTT 269
Query: 469 GFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIP-LLEKMISNS 527
+ AL +S + R + Q L NL++ + NK ++ +G++P L++ + S
Sbjct: 270 RVISAL----KSLIVSRYATVQVNVTAVLVNLSLEKS-NKVKIVRSGIVPPLIDVLKCGS 324
Query: 528 -NSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIP 586
+ + + +L+ D+ K IG + L+ L + TE + D+ ALY+LS +
Sbjct: 325 VEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGTE-LTRHDSALALYHLSLVQ 383
Query: 587 SNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATV 646
SN L+ G + L + G + + + + + G+ + +
Sbjct: 384 SNRGKLVKLGAVQMLLGMVSLGQMIG--RVLLILCNMASCPVSRPALLDSGGVECMVGVL 441
Query: 647 LDTGELIE--QEQAVSCLFLLCN-GNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRL 703
E+ E +E V+ L+ L + G + + + + LV + +G R + KA+R+
Sbjct: 442 RRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRV 501
Query: 704 LMLFREQRQRD 714
L + R + + D
Sbjct: 502 LEVLRAKIEDD 512
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 170 (64.9 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P CPISL+ M DPV + +GQTYER+ I KW + GH TCP T Q+L +TPN +
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 340 GLIASW 345
LI +W
Sbjct: 125 HLIYTW 130
Score = 79 (32.9 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 36/175 (20%), Positives = 80/175 (45%)
Query: 432 LNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQE 491
+++LN+G N K N IR L+++ ++ +V L+R ++ RN +
Sbjct: 237 VDMLNDGSN-ETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKR-HRNGVSP- 293
Query: 492 IGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIG 551
A+ L + + + LM++ G +P L ++ + + AL++ + D + +
Sbjct: 294 --ALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVA 351
Query: 552 ---SSHAVPFLVELCKGKTEHQCKLDALHALYNLSTI-PSNI-PNLLSAGIISGL 601
S++ +P+ V + +E+ C AL L+++ + P P + G+ + L
Sbjct: 352 VKDSANTIPYTVRVLMRVSEN-CTNYALSILWSVCKLAPEECSPLAVEVGLAAKL 405
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 194 (73.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 268 PNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKL 327
P + ++ +PPE +CPIS+ LM DPVII++G TY+R+ IE W++ G+ TCP T L
Sbjct: 21 PESEPESEITIPPE-FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVL 79
Query: 328 PHLCLTPNYCVKGLIASWCEMNG 350
PN+ ++ +I WC G
Sbjct: 80 TTFDQIPNHTIRKMIQGWCVEKG 102
Score = 51 (23.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/84 (19%), Positives = 37/84 (44%)
Query: 453 LLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELML 512
+L D+ F NG AL++ + +V +S + + +A++ + + L
Sbjct: 239 ILSLDETRVHSFAVENGVAEALVKLIRDSV---SSSSTKSSLIAIYQMVLQKPEIASEFL 295
Query: 513 AAGVIPLLEKMISNSNSHGAATAL 536
G++ + +MI ++ + AL
Sbjct: 296 EIGLVSITVEMIVDAENSVCEKAL 319
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 47/123 (38%), Positives = 71/123 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGH-STCPKTQQKLPHLCLTPNYCV 338
P CPISL +M DPVI+++G TY+R IEKWL G ++CP T+Q + LTPN+ +
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67
Query: 339 KGLIASWCEMN---GVS-VPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVV 394
+ LI SWC +N G+ +P P +L +ES++S N++ C LK ++ +
Sbjct: 68 RRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLI--KESSSSHLNQV--KC-LKRLRQI 122
Query: 395 PLE 397
E
Sbjct: 123 VSE 125
>TAIR|locus:2038598 [details] [associations]
symbol:AT2G27430 "AT2G27430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY169003 EMBL:AY954802 IPI:IPI00540469
RefSeq:NP_180312.2 UniGene:At.38764 ProteinModelPortal:Q8GUS7
SMR:Q8GUS7 PRIDE:Q8GUS7 EnsemblPlants:AT2G27430.1 GeneID:817288
KEGG:ath:AT2G27430 TAIR:At2g27430 eggNOG:NOG235856
HOGENOM:HOG000241608 InParanoid:Q8GUS7 OMA:KNMEMIT PhylomeDB:Q8GUS7
ProtClustDB:CLSN2690947 Genevestigator:Q8GUS7 Uniprot:Q8GUS7
Length = 438
Score = 188 (71.2 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 77/317 (24%), Positives = 140/317 (44%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 509
+I L ++D++ R G + L+ + S V S Q+ AL L+ NK
Sbjct: 100 EIEKLAREDKKTRKLMAELGVIQILVSMVASDV----SGHQKAAVNALIQLSHGTYTNKA 155
Query: 510 LMLAAGVIPLLEK---MISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKG- 565
LM+ A + L K ++ S H A L L+LS L + + + SS +PFL++
Sbjct: 156 LMVNADICSKLPKNVEVLDQSTRHAFAELL-LSLSSLTNTQLPVASSQILPFLMDTMNSD 214
Query: 566 KTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXX 625
T+ + K L + NL + N L+ G + L SL D +EK
Sbjct: 215 STDMKTKEICLATISNLCLVLENAGPLVLNGAVETLLSLMSTKD--LSEKALASLGKLVV 272
Query: 626 XXXGKEEMNSTPGLVSGLATVLDTGELIE-QEQAVSCLFLLCNGNEKCCQMVLQEGVIPA 684
GK+ M + GL +L ++ + QE A L +L + + + + + G++P
Sbjct: 273 TQMGKKAMEDCLLVSKGLIEILTWEDIPKCQEYAAYILMVLAHQSWSQREKMAKAGIVPV 332
Query: 685 LVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDDSSEKLKPTY-TP-TPDHA 742
L+ +S+ GS + +A +LL F+++R V +G + + P +P +P
Sbjct: 333 LLEVSLLGSPLVQKRAVKLLQWFKDERN-----VRMGPHSGPQTGWVSPGMGSPMSPRSG 387
Query: 743 PESKPLCKSISRRKMGK 759
E + + K++ ++ + K
Sbjct: 388 EEGRKMMKNLVKQSLYK 404
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 186 (70.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P + +CPIS +LM DPVIIASG TY+R IEKW G+ TCP T L L PN+ ++
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 340 GLIASWC 346
+I WC
Sbjct: 94 RMIQGWC 100
Score = 40 (19.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 25/114 (21%), Positives = 52/114 (45%)
Query: 359 DSLDLNYWRLALSEESTNSKSNEIVRS-CKLKEMK--------VVPLEVSGTIEESEYND 409
D +++ L SE S K+ ++ C+ KE + V+P+ V ++ SE D
Sbjct: 293 DLVNITVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD 352
Query: 410 IENIYAQEDESGNN--VFER-----YQDFLNVLNEGENLGQKCNIVEQIRLLLK 456
+ ++ + +SG+ V E ++ + +L G G K + E ++++ K
Sbjct: 353 LVSVMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNK 406
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 185 (70.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 77/338 (22%), Positives = 149/338 (44%)
Query: 281 EELRCPISLQLMYDPVIIASGQTYERICIEKWLSD----GHS-TCPKTQQKLPHLCLTPN 335
E CP++ Q+M++PV + +GQT+ER IEKW + G +CP T ++L L+P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 336 YCVKGLIASWCEMNGVSVPDSPPDSLDLNYWR----LALSEESTNSKSNEIVRS--CKLK 389
++ I W N D SL L LAL ++ +R C +
Sbjct: 87 IALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQ 146
Query: 390 EMKVVPLEVSGTIEESEYNDIEN--IYAQEDESGNNVF---ERYQDFLNVLNEGENLGQK 444
++++ + + E ++ + + DE + + + + L++ + G++
Sbjct: 147 LVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGRE 206
Query: 445 CNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNN 504
V + L K + +G ++ L+ L S+ E S ++ L NL +
Sbjct: 207 A-AVSVLFELSKSEALCEKIGSIHGAIILLVG-LTSSKSENVSTVEKADK-TLTNLERSE 263
Query: 505 NRNKELMLAAGVIPLLEKMISNSNSHGAATALYLN-LSFLDDAKPIIGSSHAVPFLVELC 563
+++ + + PLL K++ S + A YL L+ +D K I+ + L++L
Sbjct: 264 ENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQTVGSS-LIDLM 322
Query: 564 KGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGL 601
+ + Q + AL AL N+S+ + L++ GI+ L
Sbjct: 323 RTRDMSQREA-ALGALNNISSFEGSAKLLINTGILPPL 359
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 34/71 (47%), Positives = 44/71 (61%)
Query: 275 QMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTP 334
++P P CPISL+ M DPV + +GQTYER I KW + GH TCP T Q+L +TP
Sbjct: 56 ELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTP 115
Query: 335 NYCVKGLIASW 345
N + LI +W
Sbjct: 116 NKTLHQLIYTW 126
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 163 (62.4 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 284 RCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIA 343
+CPISL +M PV +++G TY+R+ I++WL DG++TCP T Q L + PN + LI
Sbjct: 16 KCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLID 75
Query: 344 SWCE-MNGVSVPDSP 357
W + +N + +SP
Sbjct: 76 HWSDSINRRADSESP 90
Score = 49 (22.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 21/82 (25%), Positives = 34/82 (41%)
Query: 639 LVSGLATVLDTGELIEQEQAVSCLFLL-----CN-GNEKCCQMVLQEGVIPALVSISVNG 692
LV+ L ++L T CL LL C G + C V E V+ L+ +S
Sbjct: 274 LVTKLTSLL-TDPTTSVSVTEKCLKLLEAISSCKEGRSEICDGVCVETVVNKLMKVSTAA 332
Query: 693 STRGRDKAQRLLMLFREQRQRD 714
+ + LF+E++ +D
Sbjct: 333 TEHAVTVLWSVCYLFKEKKAQD 354
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ +LM DPVI A G +YE+ +E W+S+ + P T LP L LTPN +K
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNRTLK 464
Query: 340 GLIASWCE 347
I+ W E
Sbjct: 465 MAISRWLE 472
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 160 (61.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 32/74 (43%), Positives = 39/74 (52%)
Query: 272 RSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLC 331
RS + P+ CPISL++M DP + A G TYE I WL GH T P T KL H
Sbjct: 318 RSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTK 377
Query: 332 LTPNYCVKGLIASW 345
L PN ++ I W
Sbjct: 378 LVPNLALRSAIQEW 391
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 158 (60.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 338
PP+ CPI+ +M DP + A G TYE I +W GH T P ++LPH L PN +
Sbjct: 353 PPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLAL 412
Query: 339 KGLIASWCEM 348
+ I W ++
Sbjct: 413 RSAIQEWLQL 422
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 153 (58.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 281 EELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKG 340
E+ +CPIS+++M DP + A G TYE KWL G T PKT + L + L PN+ ++
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 341 LIASWCEMN 349
+I W E N
Sbjct: 295 IIKDWLEKN 303
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 160 (61.4 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 78/338 (23%), Positives = 147/338 (43%)
Query: 281 EELRCPISLQLMYDPVIIASGQTYERICIEKWLSD----GHS-TCPKTQQKLPHLCLTPN 335
E CP++ ++M+DPV + +G+T+ER IEKW + G +CP T Q+L ++ +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 336 YCVKGLIASWCEMNGVSVPDSPPDSL-------DLNYWRLALSEESTNSKSNEI-VRSCK 387
++ I W N + D SL D+ + + + +SN VR+ +
Sbjct: 85 IALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQ 144
Query: 388 LKEMKVVPLE-VSGTIEESEYNDIENIYAQEDESGNNVFE--RYQDFLNVLNEGENLGQK 444
L M + L+ S + ++ + +DES V E + + L+ + G++
Sbjct: 145 LIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSKGRE 204
Query: 445 CNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNN 504
V + L K + +G ++ L+ L S+ E S ++ L N+ +
Sbjct: 205 A-AVSLLFELSKSEALCEKIGSIHGALILLVG-LTSSNSENVSIVEKADR-TLENMERSE 261
Query: 505 NRNKELMLAAGVIPLLEKMISNSNSHGAATALYLN-LSFLDDAKPIIGSSHAVPFLVELC 563
+++ + PLL K++ S + A +L L +D K ++ + LV+L
Sbjct: 262 EIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVGSS-LVDLM 320
Query: 564 KGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGL 601
+ Q + AL AL +S+ + L+S GI+ L
Sbjct: 321 RSGDMPQREA-ALKALNKISSFEGSAKVLISKGILPPL 357
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 155 (59.6 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P +CPISL +M PV + +G TY+R I++WL G++TCP T Q L PN ++
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 340 GLIASWCEM-----NGVSVPDSPPDSLDL 363
LI W + NG S +PP ++
Sbjct: 73 RLINIWSDSIGRRHNGDSPVLNPPSGREV 101
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 161 (61.7 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 338
PP CPIS ++M +P + A G TYE + +WL +GH T P T KL H L PN+ +
Sbjct: 497 PPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHAL 556
Query: 339 KGLIASWCEMN 349
+ I W + N
Sbjct: 557 RSAIQEWLQRN 567
Score = 43 (20.2 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 19/59 (32%), Positives = 23/59 (38%)
Query: 135 KQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALTERRALKKLIERAR 193
KQ DD + ++ GRK N EL +A LG E KK IE R
Sbjct: 297 KQERDDALIIILNGRKLY----NEELRRRVEAEEMLGKEKE-----EHERTKKEIEEVR 346
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 155 (59.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P RCPISL +M PV + +G TY+R I++WL G++TCP T Q L + PN ++
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 340 GLIASWCE 347
LI W +
Sbjct: 71 RLIEIWSD 78
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 447 IVEQIRLLLKDDEEARVFTGANGFVVALLRFLES 480
++ + L K+D+ T NG V +L L+S
Sbjct: 350 VLWSVSYLFKEDKALEAVTSVNG-VTKILLLLQS 382
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 123 (48.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 338
PP+ CPIS +M +P + A G TYE +WL+ G P T +L + L PN +
Sbjct: 294 PPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVL 353
Query: 339 KGLIASWCEMN 349
+ I W + +
Sbjct: 354 RSAIKDWLQQH 364
Score = 74 (31.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 36/162 (22%), Positives = 69/162 (42%)
Query: 57 LHIALEKAKNILHHCSECSKLYLAITGDSVLLK---FEKARSALAES--LRRVED-IVPQ 110
+HI KA ++ H C ++L G+ + + FE A SA + S L ++ ++P
Sbjct: 86 VHITPTKADYVIQHAPHCCNIWLVCNGNLIQTREGRFEHAGSAYSSSSSLHSIDSALIPY 145
Query: 111 SIGCQILEIVNELETIAFSLDPS----EKQVGDDIIALLQQGRKFNDSNDNNELESFHQA 166
G E V E ++ S + S EK ++ L+ + +++ +
Sbjct: 146 G-GAGRAERVTEPHALSSSEEQSARGIEKMYYEEQRRRLEIEELKREKEQRDKMRRVREE 204
Query: 167 A--TRLGITSS--RAALTERRALKKLIERARVE-EDKRKESI 203
A + G+T + RR ++ + RA+ E ED ++ I
Sbjct: 205 ALSSSSGVTKILYNEEVMRRREVEAELNRAKAEIEDMKRVQI 246
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 157 (60.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ +LM DPVI + G +YE+ +E W+S T P T LP + LTPN +K
Sbjct: 405 PDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTLK 464
Query: 340 GLIASWCE 347
I+ W E
Sbjct: 465 MAISRWLE 472
Score = 41 (19.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 234 CSPTIQCSFEDGVHNG 249
C+P + C+F HNG
Sbjct: 239 CAPVLACAFS---HNG 251
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 148 (57.2 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 30/66 (45%), Positives = 38/66 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ ++M DPVI A G +YER IE W+S + T P T L LTPN +K
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 340 GLIASW 345
I W
Sbjct: 478 MAIFRW 483
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 155 (59.6 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 31/68 (45%), Positives = 39/68 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ +LM DPVI + G +YER +E W+ T P T LP L LTPN +K
Sbjct: 403 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLK 462
Query: 340 GLIASWCE 347
I W E
Sbjct: 463 MAINRWLE 470
Score = 37 (18.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 234 CSPTIQCSFE-DG 245
C+P + C+F DG
Sbjct: 238 CAPVLACAFSHDG 250
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 155 (59.6 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 31/68 (45%), Positives = 39/68 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ +LM DPVI + G +YER +E W+ T P T LP L LTPN +K
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLK 464
Query: 340 GLIASWCE 347
I W E
Sbjct: 465 MAINRWLE 472
Score = 37 (18.1 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 234 CSPTIQCSFE-DG 245
C+P + C+F DG
Sbjct: 239 CAPVLACAFSHDG 251
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 151 (58.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ +LM DPVI + G +YE+ +E W+S T P T LP LTPN +K
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLK 464
Query: 340 GLIASWCE 347
I W E
Sbjct: 465 MAINRWLE 472
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 234 CSPTIQCSFE-DG 245
C+P + C+F DG
Sbjct: 239 CAPVLACAFSHDG 251
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 145 (56.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 271 RRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHL 330
++ G P CPI ++M +P I A G TYER I WL + H+ P T+QKL H
Sbjct: 717 KKEGSNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWL-EKHNISPVTRQKLDHF 775
Query: 331 CLTPNYCVKGLIASW 345
LTPN+ ++ I W
Sbjct: 776 KLTPNHTLRSAIRDW 790
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 67/273 (24%), Positives = 114/273 (41%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAV--CERNSYAQEIGAMALFNLAVNNNRN 507
++RL+ K D ++R+ G + L L S+ + N+ A + + ++R
Sbjct: 30 ELRLISKQDPDSRLIIADAGAIPYLAETLYSSSHSSQENAAATLLNLSITSREPLMSSRG 89
Query: 508 KELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPF-LVELCKGK 566
L + + + S + +A +Y L + +PIIGS + F L+ + +
Sbjct: 90 L-LDALSHALRHHDTTTSPAAVQSSAATIYSLLIAEESYRPIIGSKRDIIFSLIHIIRYP 148
Query: 567 TEHQCKL-DALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMW-TEKXXXXXXXXX 624
H + D+L AL+ ++ P N ++S G I L SL V E
Sbjct: 149 DSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPALFSLIVKDSRCGIVEDATAVMAQVA 208
Query: 625 XXXXGKEEMNSTPGLVSGLATVLD--TGELIE-QEQAVSCLFLL--CNG----NEKCCQM 675
++ M G + LA +LD TG + +E +V L L C G +E +
Sbjct: 209 GCEDSEDGMRRVSG-ANVLADLLDPCTGSSLRIKENSVGALLNLARCGGAAARSEVAAAV 267
Query: 676 V--LQEGVIPALVSISVNGSTRGRDKAQRLLML 706
EG + +V ++ NGS +GR KA LL L
Sbjct: 268 ASGADEGAMEGIVYVAENGSLKGRKKAVDLLKL 300
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/203 (29%), Positives = 93/203 (45%)
Query: 490 QEIGAMALFNLAVNNNRNKELMLAAGVI-PLLEKMIS-NSNSHGAATALYLNLSFLDDAK 547
Q AL NLAVNN NK L++ G + PL+ +M+ N A NL+ DD K
Sbjct: 102 QVAACAALGNLAVNNE-NKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLATRDDNK 160
Query: 548 PIIGSSHAVPFLVELCKGKTEH-QCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAV 606
I +S A+ L +L K K H + + +A AL N++ N L++AG + L SL
Sbjct: 161 HKIATSGALIPLTKLAKSK--HIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLS 218
Query: 607 PGDPMWTEKXXXXXXXXXXXXXGKEEMNST-PGLVSGLATVLDTGELIEQEQAVSCLFLL 665
DP ++++ T P LVS L +++D+ + QA L L
Sbjct: 219 STDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNL 278
Query: 666 CNGNEKCCQMVLQEGVIPALVSI 688
+ ++V + G +P LV +
Sbjct: 279 ASDTSYQLEIV-RAGGLPHLVKL 300
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 147 (56.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 338
PP CPI ++M DP+I A G TYE I +WL++GH T P T K+ L PN+ +
Sbjct: 735 PPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHAL 794
Query: 339 KGLIASW 345
I W
Sbjct: 795 HLAIQDW 801
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/50 (22%), Positives = 29/50 (58%)
Query: 146 QQGRKFNDSNDNNELESFHQAATRLGITSSRAALTERRALKKLIERARVE 195
+ G+K+ + D + E+ +A G+ ++ +R+ L++L+E+ ++E
Sbjct: 310 EAGKKWEE--DASTTEALCKAKALEGLCIKESS--QRKRLEELLEKEKLE 355
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/79 (36%), Positives = 39/79 (49%)
Query: 267 RPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQK 326
+ N SG PP CP+ +M +P + A G TY+R IE+WL + H+T P T
Sbjct: 754 KARNSFSGVSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSP 812
Query: 327 LPHLCLTPNYCVKGLIASW 345
L L PNY + I W
Sbjct: 813 LHSKNLLPNYTLYTAIMEW 831
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/83 (33%), Positives = 40/83 (48%)
Query: 267 RPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQK 326
+ N S PP CP+ +M +P I A G TY+R IE+W+ + H T P T
Sbjct: 737 KARNSLSAAPSQPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM-ENHRTSPVTNSP 795
Query: 327 LPHLCLTPNYCVKGLIASWCEMN 349
L ++ L PN+ + I W N
Sbjct: 796 LQNVNLLPNHTLYAAIVEWRNRN 818
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 136 (52.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 31/85 (36%), Positives = 40/85 (47%)
Query: 263 SFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPK 322
SF+ N R PP + CPI ++M DP + A G TYE I WL H T P
Sbjct: 752 SFHLGRNEHRIA----PPYFI-CPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPM 806
Query: 323 TQQKLPHLCLTPNYCVKGLIASWCE 347
T KL H L N+ ++ I W +
Sbjct: 807 TNVKLSHTSLIANHALRSAIQEWLQ 831
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 139 (54.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P CPI ++M DP I A G TYER I++W+ P T+ +L H LTPN+ ++
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 340 GLIASW 345
I W
Sbjct: 769 SAIREW 774
Score = 44 (20.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 46/200 (23%), Positives = 82/200 (41%)
Query: 39 SLEASRPRSK--SGIQALCSLHIAL---EKAKNILHHCS-ECSKLYLAITGDSVLLKFEK 92
SL S P S+ S Q+ S I L E ++IL H + SK+ + LK K
Sbjct: 236 SLPHSHPTSRVYSDAQS-SSTDIVLVDDEHCRSILRHSTVSTSKIQM---DPRPHLKTPK 291
Query: 93 AR-SALAESLRRVEDIVPQSIGCQILEIVNELETIAFSLDPSEKQVGDDIIALLQQGRKF 151
+ A E LR+ E S+ Q E + +T SL + + +I L++ +
Sbjct: 292 SGVRAEVEQLRK-EVQTTLSMYKQACEELVHKQTQVQSLSSECIKETERVITALEK-EEM 349
Query: 152 NDSNDNNELESFHQAATRLGITSSRAALTERRALKKLIERARVEEDKRKESIVAYLLHLM 211
E E H A + + +++ L + ++L E +++ K+ ++ L
Sbjct: 350 RRKAAAEEKEK-HLKAVK-EVEEAKSMLAKEFCERQLAELDALKQSIEKQKVIEQLFLRD 407
Query: 212 RKYSKLFRSEMIDDNDSQGS 231
+Y K + E+ D+ S
Sbjct: 408 GRYRKYTKEEIAAATDNFSS 427
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 132 (51.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 56/199 (28%), Positives = 89/199 (44%)
Query: 490 QEIGAMALFNLAVNNNRNKELMLA-AGVIPLLEKMIS-NSNSHGAATALYLNLSFLDDAK 547
Q + AL NLAVN + NK L++A G+ PL+++M+S N A NL+ +D K
Sbjct: 123 QRAASAALGNLAVNAD-NKVLIVALGGLAPLIKQMMSPNVEVQCNAVGCITNLATHEDNK 181
Query: 548 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
I S A+ L+ L K K + + + +A AL N++ N L++AG I L L
Sbjct: 182 AKIARSGALGPLIRLAKSK-DMRVQRNATGALLNMTHSDDNRQQLVNAGAIPVLVQLLSS 240
Query: 608 GDPMWTEKXXXXXXXXXXXXXGKEEMNSTPG-LVSGLATVLDTGELIEQEQAVSCLFLLC 666
D ++ + T LV L ++D+ Q QA L L
Sbjct: 241 SDVDVQYYCTTALSNIAVDASNRKRLAQTESRLVQSLVHLMDSSTPKVQCQAALALRNLA 300
Query: 667 NGNEKCCQMVLQEGVIPAL 685
+ + ++V +G+ P L
Sbjct: 301 SDEKYQLEIVRAKGLPPLL 319
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 139 (54.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ +LM DP+I + G +YE+ +E W+S T P T L + LTPN +K
Sbjct: 404 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLK 463
Query: 340 GLIASW 345
I W
Sbjct: 464 MAIDRW 469
Score = 37 (18.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 234 CSPTIQCSFE-DG 245
C+P + C+F DG
Sbjct: 239 CAPVLACAFSHDG 251
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 139 (54.0 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ +LM DP+I + G +YE+ +E W+S T P T L + LTPN +K
Sbjct: 405 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLK 464
Query: 340 GLIASW 345
I W
Sbjct: 465 MAIDRW 470
Score = 37 (18.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 234 CSPTIQCSFE-DG 245
C+P + C+F DG
Sbjct: 239 CAPVLACAFSHDG 251
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 131 (51.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 474 LLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVI-PLLEKMIS-NSNSHG 531
+L L+SA +S Q AL NLAVN NK L++ G + PL+ +M+S N
Sbjct: 92 ILILLQSA----DSEVQRAACGALGNLAVNTE-NKILIVEMGGLEPLIRQMMSTNIEVQC 146
Query: 532 AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPN 591
A NL+ DD K I S A+ L +L K K + + + +A AL N++ N
Sbjct: 147 NAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSK-DIRVQRNATGALLNMTHSGENRQE 205
Query: 592 LLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNST-PGLVSGLATVLDTG 650
L++AG + L SL D ++++ ST P LV L ++D+
Sbjct: 206 LVNAGAVPVLVSLLSNEDADVQYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMDSP 265
Query: 651 ELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSI 688
Q QA L L + + ++V + G +P LV +
Sbjct: 266 SPRVQCQATLALRNLASDSGYQVEIV-RAGGLPHLVQL 302
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 131 (51.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 474 LLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVI-PLLEKMIS-NSNSHG 531
+L L+SA +S Q AL NLAVN NK L++ G + PL+ +M+S N
Sbjct: 92 ILILLQSA----DSEVQRAACGALGNLAVNTE-NKILIVEMGGLEPLIRQMMSTNIEVQC 146
Query: 532 AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPN 591
A NL+ DD K I S A+ L +L K K + + + +A AL N++ N
Sbjct: 147 NAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSK-DIRVQRNATGALLNMTHSGENRQE 205
Query: 592 LLSAGIISGLQSLAVPGDPMWTEKXXXXXXXXXXXXXGKEEMNST-PGLVSGLATVLDTG 650
L++AG + L SL D ++++ ST P LV L ++D+
Sbjct: 206 LVNAGAVPVLVSLLSNEDADVQYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMDSP 265
Query: 651 ELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSI 688
Q QA L L + + ++V + G +P LV +
Sbjct: 266 SPRVQCQATLALRNLASDSGYQVEIV-RAGGLPHLVQL 302
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 58/202 (28%), Positives = 91/202 (45%)
Query: 490 QEIGAMALFNLAVNNNRNKELMLAA-GVIPLLEKMIS-NSNSHGAATALYLNLSFLDDAK 547
Q ++AL NLAVN NK L++ G+ L+ +M+S + A NL+ LD+ K
Sbjct: 102 QRAASVALGNLAVNAE-NKALVVKLNGLDLLIRQMMSPHVEVQCNAVGCITNLATLDENK 160
Query: 548 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
I S A+ L L K K + + + +A AL N++ N L+SAG I L SL
Sbjct: 161 SKIAHSGALGPLTRLAKSK-DIRVQRNATGALLNMTHSYENRQQLVSAGTIPVLVSLLPS 219
Query: 608 GDPMWTEKXXXXXXXXXXXXXGKEEM-NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC 666
D ++ + S P LV L ++DT Q QA L L
Sbjct: 220 SDTDVQYYCTTSISNIAVDAVHRKRLAQSEPKLVRSLIQLMDTSSPKVQCQAALALRNLA 279
Query: 667 NGNEKCCQMVLQEGVIPALVSI 688
+ +E+ ++Q +P+L+ +
Sbjct: 280 S-DERYQIEIVQSNALPSLLRL 300
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 273 SGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCL 332
SG +P + CPIS+++M DP + + G TYE I W G S P T LP+L L
Sbjct: 430 SGDSSVPAAFI-CPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNL 488
Query: 333 TPNYCVKGLIASWCE 347
PN ++ I + +
Sbjct: 489 VPNRVLRSFIHGYLQ 503
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 113 (44.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+ L C I+L++ DPVI SG TYER I + L P T++K+ L PN +K
Sbjct: 201 PDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAIK 260
Query: 340 GLIASWCE 347
+A++ E
Sbjct: 261 EAVAAYLE 268
Score = 47 (21.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 158 NELESFHQAATRLGITSSRAALTER-RALKKLIERARVEEDKRKESIVAYL 207
N+ + + T + A TER +AL+++ ++A EEDK E + YL
Sbjct: 156 NQQRALDMSRTEESSDEAYTAHTERLKALERVFKKA-AEEDKPTE-VPDYL 204
>ZFIN|ZDB-GENE-030616-541 [details] [associations]
symbol:kpna3 "karyopherin (importin) alpha 3"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR000225
InterPro:IPR002652 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 ZFIN:ZDB-GENE-030616-541
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 HOGENOM:HOG000167616
GeneTree:ENSGT00610000085856 HOVERGEN:HBG001846 CTD:3839
OMA:TQGGTFN HSSP:P52292 EMBL:BX294379 EMBL:AL606727 IPI:IPI00503523
RefSeq:NP_958477.2 UniGene:Dr.78859 SMR:Q8JFT7
Ensembl:ENSDART00000074519 GeneID:368640 KEGG:dre:368640
InParanoid:Q8JFT7 NextBio:20813085 Uniprot:Q8JFT7
Length = 520
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 63/262 (24%), Positives = 119/262 (45%)
Query: 439 ENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALF 498
E+L +K N+ ++ L +D + F G N V L L++A + N+ Q + A+
Sbjct: 43 EHLLKKRNVPQEESL--EDSDVDSDFKGQN---VTLDAILQNATSD-NAVVQ-LSAVQAA 95
Query: 499 NLAVNNNRNKEL--MLAAGVIPLLEKMISNSNSHG----AATALYLNLSFLDDAKP-IIG 551
++++RN + ++ G++P+L K + ++ AA AL N++ A+ +
Sbjct: 96 RKLLSSDRNPPIDDLIKCGILPILVKCLERDDNPSLQFEAAWAL-TNIASGTSAQTQAVV 154
Query: 552 SSHAVPFLVELCKGKTEHQCKLDALHALYNL-STIPSNIPNLLSAGIISGLQSLAVPGDP 610
S+AVP + L ++ C+ A+ AL N+ P ++S G++ L S P P
Sbjct: 155 KSNAVPLFLRLLHSPHQNVCE-QAVWALGNIIGDGPQCRDYVISLGVVKPLLSFINPSIP 213
Query: 611 M-WTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVL---DTGELIEQEQAVSCLFLLC 666
+ + M + ++ L ++ D L++ A+S +L
Sbjct: 214 ITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALS--YLTD 271
Query: 667 NGNEKCCQMVLQEGVIPALVSI 688
GNE+ QMV+ GV+P LV +
Sbjct: 272 GGNEQI-QMVIDSGVVPYLVPL 292
>UNIPROTKB|O00505 [details] [associations]
symbol:KPNA3 "Importin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0046718 "viral entry into host cell" evidence=IEA] [GO:0075732
"viral penetration into host nucleus" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=TAS] [GO:0006461 "protein complex assembly"
evidence=TAS] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=TAS] [GO:0008139 "nuclear localization sequence
binding" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005829 Reactome:REACT_6900 GO:GO:0005654 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006461 GO:GO:0008565
EMBL:CH471075 GO:GO:0005643 GO:GO:0019221 eggNOG:COG5064
GO:GO:0046718 EMBL:AL135901 GO:GO:0008139 GO:GO:0006607
HOGENOM:HOG000167616 HOVERGEN:HBG001846 EMBL:D89618 EMBL:Y12394
EMBL:AF034756 EMBL:AF005263 EMBL:AK290528 EMBL:AK291000
EMBL:AL136301 EMBL:BC017355 EMBL:BC024202 IPI:IPI00299033
RefSeq:NP_002258.2 UniGene:Hs.527919 ProteinModelPortal:O00505
SMR:O00505 DIP:DIP-27586N IntAct:O00505 MINT:MINT-88920
STRING:O00505 PhosphoSite:O00505 PaxDb:O00505 PeptideAtlas:O00505
PRIDE:O00505 DNASU:3839 Ensembl:ENST00000261667 GeneID:3839
KEGG:hsa:3839 UCSC:uc001vdj.2 CTD:3839 GeneCards:GC13M050273
HGNC:HGNC:6396 HPA:HPA046852 MIM:601892 neXtProt:NX_O00505
PharmGKB:PA30187 InParanoid:O00505 OMA:TQGGTFN OrthoDB:EOG48GW2Z
PhylomeDB:O00505 ChiTaRS:KPNA3 GenomeRNAi:3839 NextBio:15107
ArrayExpress:O00505 Bgee:O00505 CleanEx:HS_KPNA3
Genevestigator:O00505 GermOnline:ENSG00000102753 GO:GO:0075732
Uniprot:O00505
Length = 521
Score = 120 (47.3 bits), Expect = 0.00091, P = 0.00091
Identities = 62/262 (23%), Positives = 119/262 (45%)
Query: 439 ENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALF 498
E+L +K N+ ++ L +D + F N V L L++A + N Q + A+
Sbjct: 43 EHLLKKRNVPQEESL--EDSDVDADFKAQN---VTLEAILQNATSD-NPVVQ-LSAVQAA 95
Query: 499 NLAVNNNRNKEL--MLAAGVIPLLEKMISNSNSHG----AATALYLNLSFLDDAKP-IIG 551
++++RN + ++ +G++P+L K + ++ AA AL N++ A+ +
Sbjct: 96 RKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWAL-TNIASGTSAQTQAVV 154
Query: 552 SSHAVPFLVELCKGKTEHQCKLDALHALYNL-STIPSNIPNLLSAGIISGLQSLAVPGDP 610
S+AVP + L + ++ C+ A+ AL N+ P ++S G++ L S P P
Sbjct: 155 QSNAVPLFLRLLRSPHQNVCE-QAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIP 213
Query: 611 M-WTEKXXXXXXXXXXXXXGKEEMNSTPGLVSGLATVL---DTGELIEQEQAVSCLFLLC 666
+ + M + ++ L ++ D L++ A+S +L
Sbjct: 214 ITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALS--YLTD 271
Query: 667 NGNEKCCQMVLQEGVIPALVSI 688
GNE+ QMV+ GV+P LV +
Sbjct: 272 GGNEQI-QMVIDSGVVPFLVPL 292
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 775 762 0.00091 121 3 11 22 0.42 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 620 (66 KB)
Total size of DFA: 387 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 74.53u 0.08s 74.61t Elapsed: 00:00:32
Total cpu time: 74.56u 0.08s 74.64t Elapsed: 00:00:35
Start: Fri May 10 23:01:10 2013 End: Fri May 10 23:01:45 2013