BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004073
(775 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/777 (70%), Positives = 632/777 (81%), Gaps = 13/777 (1%)
Query: 1 MDIAEVEENLFAASDAKLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIA 60
MD++E+EENLFAASDAKLHGDMCK+LSA+YCK+LS+FPSLE +RPRSKSGIQ LCSLHIA
Sbjct: 1 MDVSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIA 60
Query: 61 LEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIV 120
LEKAKNIL HCSECSKLYLAITGD+VLLKFEKA+SAL +SLRRVEDIVP SIG QIL+IV
Sbjct: 61 LEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIV 120
Query: 121 NELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALT 180
ELE F LDPSEK+VGD IIALLQQG+KF++ +D+ ELE FHQAATRL ITSSR+AL
Sbjct: 121 GELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALA 180
Query: 181 ERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGSTPCSPTIQC 240
ERRALKK+I+RARVEEDKRKESIVAYLLHLMRKYSKLFRSEM+D+NDS STPCSPT Q
Sbjct: 181 ERRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPCSTPCSPTGQG 240
Query: 241 SFEDGVHNGNEHAFDRQLSKLCSFNFRP-NNRRSGQMPLPPEELRCPISLQLMYDPVIIA 299
ED V+ AF RQLSK S N++P N+R+SGQMP+PPEELRCPISLQLMYDPVIIA
Sbjct: 241 PNEDRVN-----AFGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIA 295
Query: 300 SGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPD 359
SGQTYER+CIEKW SDGH++CPKTQQ+LPHL LTPNYCVKGLIASWCE NG++VP PP+
Sbjct: 296 SGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVPTGPPE 355
Query: 360 SLDLNYWRLALSE-ESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQED 418
SLDLNYWRLA+S+ ES NSKS + V C K+++VVPLE S TIE +N E
Sbjct: 356 SLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKNNAPDEV 415
Query: 419 ESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFL 478
+S NV E YQD L ++++ E+L +KC +VE +R+LLKD+EEAR+ GANGFV A L+FL
Sbjct: 416 DSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFL 475
Query: 479 ESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYL 538
ESAV + N+ AQE GAMALFNLAVNNNRNKELML +GVIPLLEKMIS S S G ATALYL
Sbjct: 476 ESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPATALYL 535
Query: 539 NLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGII 598
NLS L+ AKP+IGSS AV F V L T+ QCKLDALHALYNLST NIP LLS+ II
Sbjct: 536 NLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNII 595
Query: 599 SGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQA 658
LQ LA G+ +W EKSLAVLLNLA+S GKEEM +T G++S LATVLDTG+ +EQEQA
Sbjct: 596 KSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQA 655
Query: 659 VSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPV 718
VSCL +LC G+E C QMVLQEGVIP+LVSISVNGS RGRDK+Q+LLMLFREQR RD P
Sbjct: 656 VSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSP 715
Query: 719 DIGQQDDDSSEKLKPTYTPTPDHAPES--KPLCKSISRRK-MGKAFSFLWKSKSYSV 772
+ +++ P P P APES KPL KSISRRK M + FSFLWK KS+S+
Sbjct: 716 N--KEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSI 769
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/783 (68%), Positives = 627/783 (80%), Gaps = 25/783 (3%)
Query: 1 MDIAEVEENLFAASDAKLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIA 60
MD+ EVEEN FA DAKLHG MC LS +YCKI+S+FPSLEA+RPRSKSGIQALCSLH+
Sbjct: 1 MDVNEVEENFFAPGDAKLHGKMCNALSVIYCKIMSIFPSLEAARPRSKSGIQALCSLHVV 60
Query: 61 LEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIV 120
LEK KNIL HC+E SKLYLAITGDSV+LKFEKA+S+L +SLRRVEDIV QSIG Q+LEI+
Sbjct: 61 LEKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEIL 120
Query: 121 NELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALT 180
ELE FSLDP+EK++GD II LLQQG F S+DNNELE FHQAATRLGITSSRAALT
Sbjct: 121 MELENTEFSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALT 180
Query: 181 ERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGST--PCSPTI 238
ERR LKKLIERAR+E+DKRKESIVAYLLHLMRKYSKLFRSE+ DDNDSQGS+ PCSPTI
Sbjct: 181 ERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTI 240
Query: 239 QCSFEDGVHNGNEHAFDRQLSKLCSFNFRP--NNRRSGQMPLPPEELRCPISLQLMYDPV 296
Q S +D + AFDRQLSKL SFNFR NNRRS QM +PPEELRCPISLQLMYDPV
Sbjct: 241 QGSIDDA----HGRAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISLQLMYDPV 296
Query: 297 IIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDS 356
IIASGQTYERICIEKW SDGH+TCPKT Q+L HLCLTPNYCVK LI+SWCE NGV VPD
Sbjct: 297 IIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQVPDG 356
Query: 357 PPDSLDLNYWRLALS-EESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEE----SEYNDIE 411
PP+SLDLNYWRLALS EST+++S + V SCKLK++KVVPLE SGTI+E SEY
Sbjct: 357 PPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIKEEACESEY---- 412
Query: 412 NIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFV 471
QED+ + ER + L L + + L +KC +VEQIR+LLKDDEEAR+ G NG V
Sbjct: 413 ----QEDQV--TLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCV 466
Query: 472 VALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHG 531
ALL+FL SA+ E N+ AQ++GAMALFNLAV+NNRNKELMLA+G+IPLLE+M+ N +SHG
Sbjct: 467 EALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHG 526
Query: 532 AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPN 591
+ TA+YLNLS L++AKP+IGSS AVPF+V L +TE QCK+DALH+L++LST P NIP
Sbjct: 527 SVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPC 586
Query: 592 LLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGE 651
LLSA +++ LQSL + + WTEKSLAVLLNL + AGK+EM S P LVS L T+LDTGE
Sbjct: 587 LLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGE 646
Query: 652 LIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQR 711
EQEQAVS L +LCN +E C +MVLQEGVIP+LVSISVNG+ RGR++AQ+LL LFRE R
Sbjct: 647 PNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELR 706
Query: 712 QRDHPPVDIGQQDDDSSEKLKPTYTPTPDHAPESKPLCKSISRRKMGKAFSFLWKSKSYS 771
QRD + Q + +S + ++ E+KP CKS SR+KMG+AFSFLWKSKS+S
Sbjct: 707 QRDQTHLTEPQHTEVTSP--EDGFSVASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFS 764
Query: 772 VSQ 774
V Q
Sbjct: 765 VYQ 767
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/796 (67%), Positives = 623/796 (78%), Gaps = 36/796 (4%)
Query: 1 MDIAEVEENLFAASDAKLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIA 60
MD+ E+EENLFAASDAKLHGDMCK+LS + CK+LS+FPSLE +RPRSKSGIQALCSLHIA
Sbjct: 1 MDVTELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIA 60
Query: 61 LEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIV 120
LEKAKNIL HCSECSKLYLAITGD+VLLKFEKA+ AL + L+RVEDIVP SIG QILEIV
Sbjct: 61 LEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIV 120
Query: 121 NELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALT 180
ELE F LDPSEK+VGD IIALLQQG+KF++ NDN ELE FH+AATRL ITSSR AL
Sbjct: 121 GELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALA 180
Query: 181 ERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGSTPCSPTIQC 240
ERRALKKLI+RAR EEDKRKESIVAYLLHLMRK SKLFRSE++D+NDS GS PCSP
Sbjct: 181 ERRALKKLIDRARAEEDKRKESIVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPN--- 237
Query: 241 SFEDGVHNGNEHAFDRQLSKLCSFNFRP-NNRRSGQMPLPPEELRCPISLQLMYDPVIIA 299
ED +G+ H F RQLS+ S N +P N+ SGQMP+PPEELRCPISLQLM DPVIIA
Sbjct: 238 --ED---HGSVHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIA 292
Query: 300 SGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPD 359
SGQTYER+CIEKW SDGH+TCPKTQQ+LPH+ LTPN CVKGLIASWCE NG +P PP+
Sbjct: 293 SGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIPSGPPE 352
Query: 360 SLDLNYWRLALSE-ESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQED 418
S DL+YWRLALS+ EST S+S + S KLK +K+VPLE +GT N E+ + +D
Sbjct: 353 SQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEENGTTVVERQNTEESFVSDDD 412
Query: 419 ESGN---NVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALL 475
+ + NV ERYQD L VLNE E L +KC +VE+IRLLLKDDEEAR+F GANGFV ALL
Sbjct: 413 DEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALL 472
Query: 476 RFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATA 535
RFL SAV + N+ AQ+ GAMALFNLAVNNNRNKELML +GVI LLEKMIS++ SHG+ATA
Sbjct: 473 RFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSATA 532
Query: 536 LYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA 595
LYLNLS LD+AK +IGSS AVPFLV+L + + E QCKLDALHALYNLST NIP LLS+
Sbjct: 533 LYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSS 592
Query: 596 GIISGLQS-LAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIE 654
II LQ LA G+ +W EKSLAVLLNLA+S GK+E S+ G++S LATVLD G+ E
Sbjct: 593 NIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE 652
Query: 655 QEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQ-- 712
QEQAVSCL +LCNG E C QMVLQEGVIP+LVSISVNG+ RGR+K+Q+LLMLFRE+RQ
Sbjct: 653 QEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQR 712
Query: 713 ------RDHPPVDIGQQDDDSSEKLKP---TYTPTPDHAP----ESKPLCKSISRRK-MG 758
RD PP Q + + + L + TP A E + L KS+SRRK M
Sbjct: 713 DQPSSNRDEPP-----QKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMA 767
Query: 759 KAFSFLWKSKSYSVSQ 774
+ FSF WK KSYSV +
Sbjct: 768 RPFSFFWK-KSYSVRE 782
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 201/765 (26%), Positives = 341/765 (44%), Gaps = 74/765 (9%)
Query: 17 KLHGDMCKKLSALYCKILSVFPSLEASRPRSKSGIQALCSLHIALEKAKNILHHCSECSK 76
K+H MC +L L +I+ +FP +E +RP SGIQ LC LH AL+K K +L +CSE SK
Sbjct: 14 KMHSSMCLELKRLVDRIMRIFPDIEDARPGCSSGIQTLCLLHNALDKTKQLLQYCSESSK 73
Query: 77 LYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIVNELETIAFSLDPSEKQ 136
LY+A+TGD++L + +A+ +L + L + IVP + +I +IV +L + +L+ SE++
Sbjct: 74 LYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEFSEEE 133
Query: 137 VGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSRAALTERRALKKLIERARVEE 196
G I L+Q+ + S D E++ FH AA +L +++ A +TERR+LK + E
Sbjct: 134 AGKAIRELMQKSTSSSASPD--EIKDFHYAALKLQLSTPEAIVTERRSLKIIC------E 185
Query: 197 DKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGSTPCSPTIQCSFEDGVHNGNEHAFDR 256
D ++ S + + IDD+ + HNG
Sbjct: 186 DHKQNSFTHH--------------QSIDDS-------LHANAAEAEASEEHNGT------ 218
Query: 257 QLSKLCSFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDG 316
LP E+ +C +S +MYDPVII+SG T+ER+ I+KW +G
Sbjct: 219 ---------------------LP-EKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEG 256
Query: 317 HSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPD------SPPDSLDLNYWRLAL 370
+ +CP +++KL L PN +K I+ WC NG+ V D +S+D + +
Sbjct: 257 NDSCPISKRKLDDFTLKPNVELKSQISEWCAKNGLDVQDPARKHVKASNSIDFSVSIASF 316
Query: 371 SEESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQD 430
N + + + + + Y +G+ +
Sbjct: 317 GSSLYNIPDHSGISITDFNSSYSIDSSSYSKMSKGGYFTPMQRIDSASGAGDTDSSHSEI 376
Query: 431 FLNVLNEGENLGQKCNI--VEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSY 488
++ L NL I VE +R + A + F+ L+ +L++A+ ERN
Sbjct: 377 EIDPLCGLTNLPWDAQIKVVEDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNAL-ERNGT 435
Query: 489 AQEI--GAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDA 546
A EI G + L ++ NR L V + + + A + LS
Sbjct: 436 AGEIIKGGLDLLLAFLSGNRRAIESLEEEVFKMFSVFLESEVVAEEALNILEVLSNHPHG 495
Query: 547 KPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAV 606
I SS ++ L+++ + + EH + A+ L NLS+ ++S I L S
Sbjct: 496 PSKITSSGSLSSLLKIVESQAEH-LQEQAMITLKNLSSSMEICLEMVSLDFIQKLTSFL- 553
Query: 607 PGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC 666
++ + S+ +L NL ++ G+ + TP ++ +A +L++ EQE A+S L LC
Sbjct: 554 -QQKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLC 612
Query: 667 NGNEKCCQMVLQEG--VIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQD 724
+ C +V++E + +L+ IS NG+ + A LL E ++ +
Sbjct: 613 VQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRALVEVDSDKEEEEEVSSRP 672
Query: 725 DDSSEKLKPTYTPTPDHAPESKPLCKSISRRKM-GKAFSFLWKSK 768
+ + + TP PE + S + + G FS L K K
Sbjct: 673 EGRTTASPTSQVVTPVTHPEPVKITPSPKKSGLFGFNFSSLKKKK 717
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 209 bits (531), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 199/709 (28%), Positives = 329/709 (46%), Gaps = 107/709 (15%)
Query: 5 EVEENLFAASDAKLH-GDMCKKLSALYCKILSVFPSL-EASRPRSKSGIQALCSLHIALE 62
+V + A SD ++ +C L+ ++ +F + E++ P S+ ++ L +L A+
Sbjct: 14 DVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMC 73
Query: 63 KAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRV---EDIVPQSIGCQILEI 119
AK+ L CS+ SK+YL + + V K + L +SL ++ E + + Q+ +
Sbjct: 74 SAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELV 133
Query: 120 VNELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELES-FHQAATRLGITSSRAA 178
+++ +D S+ ++ +D+ +L N S+D + + + A +L +
Sbjct: 134 LSQFRRAKGRVDVSDDELYEDLQSLC------NKSSDVDAYQPVLERVAKKLHLMEIPDL 187
Query: 179 LTERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDNDSQGSTPCSPTI 238
E AL +++ + + + E + A +L +++ + ++E DDN +
Sbjct: 188 AQESVALHEMVASSGGDVGENIEEM-AMVLKMIKDF---VQTE--DDNGEEQKV------ 235
Query: 239 QCSFEDGVHNGNEHAFDRQLSKLCSFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVII 298
GV++ + N + + S ++P+ P++ RCPISL++M DPVI+
Sbjct: 236 ------GVNSRS--------------NGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIV 275
Query: 299 ASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPP 358
+SGQTYER CIEKW+ GHSTCPKTQQ L LTPNY ++ LIA WCE N + P PP
Sbjct: 276 SSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIE-PPKPP 334
Query: 359 DSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQED 418
SL P +VS +E N IE
Sbjct: 335 SSLR--------------------------------PRKVSSFSSPAEANKIE------- 355
Query: 419 ESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFL 478
D + L G Q+ E IRLL K + + RV G + L+ L
Sbjct: 356 -----------DLMWRLAYGNPEDQRSAAGE-IRLLAKRNADNRVAIAEAGAIPLLVGLL 403
Query: 479 ESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA--ATAL 536
+ +S QE AL NL++ N NK +++AG IP + +++ + A A
Sbjct: 404 STP----DSRIQEHSVTALLNLSICEN-NKGAIVSAGAIPGIVQVLKKGSMEARENAAAT 458
Query: 537 YLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAG 596
+LS +D+ K IG+ A+P LV L T+ + K DA AL+NL N + AG
Sbjct: 459 LFSLSVIDENKVTIGALGAIPPLVVLLNEGTQ-RGKKDAATALFNLCIYQGNKGKAIRAG 517
Query: 597 IISGLQSLAV-PGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQ 655
+I L L PG M E +LA+L L++ GK + S+ V L + TG +
Sbjct: 518 VIPTLTRLLTEPGSGMVDE-ALAILAILSSHPEGKAIIGSSDA-VPSLVEFIRTGSPRNR 575
Query: 656 EQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLL 704
E A + L LC+G+ + + G++ L+ ++ NG+ RG+ KA +LL
Sbjct: 576 ENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLL 624
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 240/476 (50%), Gaps = 52/476 (10%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P + RC +SL+LM DPVI+ASGQT+ER+ I+KW+ G CPKT+Q L H LTPN+ V+
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNY----WRLALSEESTNSKSNEIVRSCKLKEMKVV- 394
+ASWCE N V PPD L+L + + L + +S N S +E++ V
Sbjct: 301 AFLASWCETNNV----YPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVF 356
Query: 395 ------PLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEG------ENLG 442
P VS + +++ N+ N A + +N ++ + + + G G
Sbjct: 357 SRSASAPGIVSEVVCKTKRNN--NAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETG 414
Query: 443 QKCNIVEQIRLLLKD----------DEEARVFTGA-----NGFVVALLRFLESAVCERNS 487
+I +++ L+ D + AR+ A N V+A + S V S
Sbjct: 415 SSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYS 474
Query: 488 YAQEIGAMA---LFNLAVNNNRNKELMLAAG-VIPLLEKM----ISNSNSHGAATALYLN 539
+ I A A L NL++N+N NK L+ +G ++PL+ + + + ++ AAT +
Sbjct: 475 TDERIQADAVTCLLNLSINDN-NKSLIAESGAIVPLIHVLKTGYLEEAKANSAAT--LFS 531
Query: 540 LSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIIS 599
LS +++ K IG + A+ LV+L G K DA AL+NLS N ++ AG +
Sbjct: 532 LSVIEEYKTEIGEAGAIEPLVDLL-GSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVR 590
Query: 600 GLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAV 659
L L P M EK++ VL NLA GK + G + L V++ G +E A
Sbjct: 591 YLVELMDPAFGM-VEKAVVVLANLATVREGKIAIGEEGG-IPVLVEVVELGSARGKENAT 648
Query: 660 SCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDH 715
+ L LC + K C V++EGVIP LV+++ +G+ RG++KAQ LL F+ RQ +
Sbjct: 649 AALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSNQ 704
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 217/463 (46%), Gaps = 74/463 (15%)
Query: 251 EHAFDRQLSKLCSFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIE 310
+HA D ++ S R P+ P+E RCPISL+LM DPVI++SGQTYER CI+
Sbjct: 208 DHANDALTTRSASIKHR--------SPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQ 259
Query: 311 KWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLAL 370
KWL GH TCPKTQQ L H LTPN+ +K LI+ WCE NG+ +P
Sbjct: 260 KWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGIELP---------------- 303
Query: 371 SEESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQD 430
+ NS+ + +S S+Y D +G
Sbjct: 304 -KNKQNSRDKKAAKS-------------------SDY----------DHAG------LVS 327
Query: 431 FLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQ 490
+N L G Q+ E IRLL K + R+ G + L+ L S+ + Q
Sbjct: 328 LMNRLRSGNQDEQRAAAGE-IRLLAKRNVNNRICIAEAGAIPLLVNLLSSS----DPRTQ 382
Query: 491 EIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--SHGAATALYLNLSFLDDAKP 548
E AL NL+++ N NK ++ + IP + +++ + + A A +LS +D+ K
Sbjct: 383 EHAVTALLNLSIHEN-NKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKV 441
Query: 549 IIGSSHAVPFLVE-LCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
IG++ A+P L+ LC G + K DA A++NL N + AGI+ L + V
Sbjct: 442 TIGAAGAIPPLINLLCDGSP--RGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVD 499
Query: 608 GDPMWTEKSLAVLLNLAASAAGKEEM-NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC 666
+++L++L LA + GK + S P + L V+ TG +E A + L+LLC
Sbjct: 500 PTGGMIDEALSLLSILAGNPEGKIVIARSEP--IPPLVEVIKTGSPRNRENAAAILWLLC 557
Query: 667 NGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFRE 709
+ + + GV AL +S G+ R + KA +L L +
Sbjct: 558 SADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQ 600
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 189/700 (27%), Positives = 313/700 (44%), Gaps = 109/700 (15%)
Query: 38 PSLEASRPRSKSG---IQALCSLHIALEKAKNILHHCSECSKLYLAITGDSVLLKFEKAR 94
P LE R +S + AL S+ +L AK++L S SK+YL + D V++KF+K
Sbjct: 46 PMLEEIRDNQESSSEVVNALLSVKQSLLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVT 105
Query: 95 SALAESLRRVEDIVPQSIGCQILEIVNELETIAFSLDPSEKQVGDDIIALLQQ-GRKFND 153
S L ++L I+P + LEI +EL+ +QV ++ L + G++ D
Sbjct: 106 SLLEQAL----SIIP----YENLEISDELK----------EQVELVLVQLRRSLGKRGGD 147
Query: 154 SNDNNELESFHQAATRLGITSSRAALTERRALKKLIERARVEE--DKRKESIVAYLLHLM 211
D+ + L + S R ++ E ++++ E+ ++ D +ES+ LL ++
Sbjct: 148 VYDDELYKDV------LSLYSGRGSVMESDMVRRVAEKLQLMTITDLTQESLA--LLDMV 199
Query: 212 RKYSKLFRSEMIDDNDSQGSTPCSPTIQCSFEDGVHNGNEHAFDRQLSKLCSFNFRPNNR 271
S D+ + S ++ +D V N + D L S P +R
Sbjct: 200 --------SSSGGDDPGESFEKMSMVLK-KIKDFVQTYNPNLDDAPLRLKSSL---PKSR 247
Query: 272 RSGQ-MPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHL 330
+ M +PPEE RCPISL+LM DPVI++SGQTYER CI+KWL GH TCPKTQ+ L
Sbjct: 248 DDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSD 307
Query: 331 CLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKE 390
+TPNY ++ LIA WCE NG+ P P ++ + + S + + + N+I LK
Sbjct: 308 IMTPNYVLRSLIAQWCESNGIEPPKRP--NISQPSSKASSSSSAPDDEHNKI-EELLLKL 364
Query: 391 MKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQ 450
P + E +N + + + + + L + N+ Q+ +
Sbjct: 365 TSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRT--QEHAVTSI 422
Query: 451 IRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKEL 510
+ L + + + ++ ++G V ++ L+ E A+E A LF+L+V + NK
Sbjct: 423 LNLSICQENKGKIVY-SSGAVPGIVHVLQKGSME----ARENAAATLFSLSV-IDENKVT 476
Query: 511 MLAAGVIPLLEKMISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKT 567
+ AAG IP L ++S + G AATAL+ NL K + VP L+ L T
Sbjct: 477 IGAAGAIPPLVTLLSEGSQRGKKDAATALF-NLCIFQGNKGKAVRAGLVPVLMRLL---T 532
Query: 568 EHQCKL--DALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAA 625
E + + ++L L LS+ P + +A + L G P E S AVL++
Sbjct: 533 EPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVH--- 589
Query: 626 SAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPAL 685
LC+ N++ + G++ L
Sbjct: 590 ---------------------------------------LCSWNQQHLIEAQKLGIMDLL 610
Query: 686 VSISVNGSTRGRDKAQRLLMLFRE--QRQRDHPPVDIGQQ 723
+ ++ NG+ RG+ KA +LL F +Q+ H + + Q
Sbjct: 611 IEMAENGTDRGKRKAAQLLNRFSRFNDQQKQHSGLGLEDQ 650
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 182/379 (48%), Gaps = 49/379 (12%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E RCPISL+LM DPVI+++GQTYER CIEKW++ GH TCP TQQK+ LTPNY ++
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 340 GLIASWCEMNGV------SVPDSPP-----------DSL-------DLNYWRLALSEEST 375
LI+ WCE NG+ + P+ P D+L D R A +E
Sbjct: 334 SLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRL 393
Query: 376 NSKSNEIVRSCKLKEMKVVPLEVSGT------IEESEYNDIENIYAQEDESGNNVFE-RY 428
+K N R C + E +PL +S +E + N+ ED + +
Sbjct: 394 LAKRNANNRIC-IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAV 452
Query: 429 QDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSY 488
++VL G ++ L + D E +V G G + AL+ L E +
Sbjct: 453 PSIVHVLKNGSMEARENAAATLFSLSVID--EYKVTIGGMGAIPALVVLL----GEGSQR 506
Query: 489 AQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA----ATALYLNLSFLD 544
++ A ALFNL + NK + AG++PL+ +++N GA A A+ LS
Sbjct: 507 GKKDAAAALFNLCIYQG-NKGRAIRAGLVPLIMGLVTNPT--GALMDEAMAILSILSSHP 563
Query: 545 DAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA---GIISGL 601
+ K IG++ VP LVE+ T + +A + +L + ++ +L A GI+ L
Sbjct: 564 EGKAAIGAAEPVPVLVEMIGSGTPRN-RENAAAVMLHLCSGEHHLVHLARAQECGIMVPL 622
Query: 602 QSLAVPGDPMWTEKSLAVL 620
+ LA+ G K++ +L
Sbjct: 623 RELALNGTDRGKRKAVQLL 641
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 490 QEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAK 547
QE AL NL+++ + NK ++++G +P + ++ N + A A +LS +D+ K
Sbjct: 426 QEHAVTALLNLSIHED-NKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYK 484
Query: 548 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
IG A+P LV L G+ + K DA AL+NL N + AG++ + L
Sbjct: 485 VTIGGMGAIPALVVLL-GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN 543
Query: 608 GDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCN 667
++++A+L L++ GK + + V L ++ +G +E A + + LC+
Sbjct: 544 PTGALMDEAMAILSILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCS 602
Query: 668 GNEKCCQMVLQE--GVIPALVSISVNGSTRGRDKAQRLL 704
G + + G++ L +++NG+ RG+ KA +LL
Sbjct: 603 GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 182/379 (48%), Gaps = 49/379 (12%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E RCPISL+LM DPVI+++GQTYER CIEKW++ GH TCP TQQK+ LTPNY ++
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 340 GLIASWCEMNGV------SVPDSPP-----------DSL-------DLNYWRLALSEEST 375
LI+ WCE NG+ + P+ P D+L D R A +E
Sbjct: 334 SLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRL 393
Query: 376 NSKSNEIVRSCKLKEMKVVPLEVSGT------IEESEYNDIENIYAQEDESGNNVFE-RY 428
+K N R C + E +PL +S +E + N+ ED + +
Sbjct: 394 LAKRNANNRIC-IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAV 452
Query: 429 QDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSY 488
++VL G ++ L + D E +V G G + AL+ L E +
Sbjct: 453 PSIVHVLKNGSMEARENAAATLFSLSVID--EYKVTIGGMGAIPALVVLL----GEGSQR 506
Query: 489 AQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA----ATALYLNLSFLD 544
++ A ALFNL + NK + AG++PL+ +++N GA A A+ LS
Sbjct: 507 GKKDAAAALFNLCIYQG-NKGRAIRAGLVPLIMGLVTNPT--GALMDEAMAILSILSSHP 563
Query: 545 DAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA---GIISGL 601
+ K IG++ VP LVE+ T + +A + +L + ++ +L A GI+ L
Sbjct: 564 EGKAAIGAAEPVPVLVEMIGSGTPRN-RENAAAVMLHLCSGEHHLVHLARAQECGIMVPL 622
Query: 602 QSLAVPGDPMWTEKSLAVL 620
+ LA+ G K++ +L
Sbjct: 623 RELALNGTDRGKRKAVQLL 641
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 490 QEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAK 547
QE AL NL+++ + NK ++++G +P + ++ N + A A +LS +D+ K
Sbjct: 426 QEHAVTALLNLSIHED-NKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYK 484
Query: 548 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
IG A+P LV L G+ + K DA AL+NL N + AG++ + L
Sbjct: 485 VTIGGMGAIPALVVLL-GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN 543
Query: 608 GDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCN 667
++++A+L L++ GK + + V L ++ +G +E A + + LC+
Sbjct: 544 PTGALMDEAMAILSILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCS 602
Query: 668 GNEKCCQMVLQE--GVIPALVSISVNGSTRGRDKAQRLL 704
G + + G++ L +++NG+ RG+ KA +LL
Sbjct: 603 GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 202/441 (45%), Gaps = 67/441 (15%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
PE+ CPISL+LM DP I+++GQTYER I++W+ G+ +CPKTQQKL + LTPNY ++
Sbjct: 244 PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLR 303
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 399
LI+ WC + + P ++ + NS + S + ++ + ++S
Sbjct: 304 SLISQWCTKHNIEQPGG------------YMNGRTKNSDGSFRDLSGDMSAIRALVCKLS 351
Query: 400 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDE 459
E + I + S +N R+L+ +
Sbjct: 352 SQSIEDRRTAVSEIRSLSKRSTDN----------------------------RILIAE-- 381
Query: 460 EARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGV--- 516
GA +V LL + ++ QE + NL++ + NKEL++ AG
Sbjct: 382 -----AGAIPVLVKLL------TSDGDTETQENAVTCILNLSIYEH-NKELIMLAGAVTS 429
Query: 517 IPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDAL 576
I L+ + S AA L+ +LS D+ K IIG+S A+ LV+L + + + K DA
Sbjct: 430 IVLVLRAGSMEARENAAATLF-SLSLADENKIIIGASGAIMALVDLLQYGS-VRGKKDAA 487
Query: 577 HALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTEKSLAVLLNLAASAAGKEEM-- 633
AL+NL N + AGI+ L + L +++L +L LA++ K +
Sbjct: 488 TALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILR 547
Query: 634 -NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNG 692
N+ P L+ L + +E A + L LC + + + + G + L+ +S +G
Sbjct: 548 ANAIPPLID----CLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDG 603
Query: 693 STRGRDKAQRLLMLFREQRQR 713
+ R + KA LL L R+ ++
Sbjct: 604 TERAKRKANSLLELLRKSSRK 624
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 171/670 (25%), Positives = 278/670 (41%), Gaps = 148/670 (22%)
Query: 64 AKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVPQSIGCQILEIVNEL 123
AK +L CS SK+Y+A+ G++++ +F ++ E L RV P
Sbjct: 117 AKKLLETCSNGSKIYMALDGETMMTRFH----SIYEKLNRVLVKAP-------------F 159
Query: 124 ETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQAATRLGITSSR---AALT 180
+ + S D D+I +L +Q +K D ++E T R +A+
Sbjct: 160 DELMISGDAK-----DEIDSLCKQLKKAKRRTDTQDIELAVDMMVVFSKTDPRNADSAII 214
Query: 181 ERRALKKLIERARVEEDKRKESIV----------------AYLLHLMRKYSKLFRSEMID 224
ER A KKL + +D + E+I +++ L+ K+ KL E D
Sbjct: 215 ERLA-KKL--ELQTIDDLKTETIAIQSLIQDKGGLNIETKQHIIELLNKFKKLQGLEATD 271
Query: 225 DNDSQGSTPCSPTIQCSFEDGVHNGNEHAFDRQLSKLCSFNFRPNNRRSGQMPLPPEELR 284
P I ++ ++K S + P E
Sbjct: 272 -------ILYQPVI----------------NKAITKSTSL-------------ILPHEFL 295
Query: 285 CPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIAS 344
CPI+L++M DPVIIA+GQTYE+ I+KW GH TCPKT+Q+L HL L PN+ +K LI
Sbjct: 296 CPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQ 355
Query: 345 WCEMNGVSVPDS--PPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVSGTI 402
WCE N +P+ PDS + ++L E+ +S E R +K+M+++ E
Sbjct: 356 WCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRS-VKQMRLLARE----- 409
Query: 403 EESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEAR 462
+ EN + + + + + G + N V + L L DE +
Sbjct: 410 ------NPENRVLIANAGAIPLLVQLLSY-------PDSGIQENAVTTL-LNLSIDEVNK 455
Query: 463 VFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEK 522
G + ++ LE+ N A+E A ALF+L++ + + L+ G+ PL++
Sbjct: 456 KLISNEGAIPNIIEILENG----NREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDL 511
Query: 523 MISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNL 582
+ HG +GK DAL AL+NL
Sbjct: 512 L-----QHGT------------------------------LRGKK------DALTALFNL 530
Query: 583 STIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSG 642
S +N + AGI+ L +L + +++L++LL LA+ G++ + +
Sbjct: 531 SLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQL-SFIET 589
Query: 643 LATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQR 702
L + G +E A S L L + N LQ GV LV I+ +G+ R + KA
Sbjct: 590 LVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANA 649
Query: 703 LLMLFREQRQ 712
L+ L + Q
Sbjct: 650 LIQLISKSEQ 659
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 204/449 (45%), Gaps = 81/449 (18%)
Query: 270 NRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPH 329
+++S ++ +P + L CP+SL+LM DPVI+A+GQTYER I++W+ G+ TCPKTQQKL +
Sbjct: 233 SKKSDKLTIPVDFL-CPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLEN 291
Query: 330 LCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLK 389
LTPNY ++ LI+ WC + + P ++ + NS ++R+ +
Sbjct: 292 FTLTPNYVLRSLISRWCAEHNIEQPAG------------YINGRTKNSGDMSVIRALVQR 339
Query: 390 EMKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQD-----FLNVLNEGENLGQK 444
+S E N + I + S +N + +N+L + Q+
Sbjct: 340 --------LSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQE 391
Query: 445 CNIVEQIRL-LLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVN 503
I + L + ++++E +F GA V ++++ L + E A+E A LF+L++
Sbjct: 392 NAITCVLNLSIYENNKELIMFAGA---VTSIVQVLRAGTME----ARENAAATLFSLSL- 443
Query: 504 NNRNKELMLAAGVIPLLEKMISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLV 560
+ NK ++ +G IP L ++ N G AATAL+ NL K + V LV
Sbjct: 444 ADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALF-NLCIYHGNKGRAVRAGIVTALV 502
Query: 561 ELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVL 620
++ T H+ +AL L +VL
Sbjct: 503 KMLSDSTRHRMVDEALTIL--------------------------------------SVL 524
Query: 621 LNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEG 680
N + + + N+ P L+ +L T + +E A + L LC + + + + G
Sbjct: 525 ANNQDAKSAIVKANTLPALIG----ILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLG 580
Query: 681 VIPALVSISVNGSTRGRDKAQRLLMLFRE 709
+ L+ +S NG+ RG+ KA LL L R+
Sbjct: 581 AVVPLMDLSKNGTERGKRKAISLLELLRK 609
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 193/441 (43%), Gaps = 68/441 (15%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P++ CPISL LM DPVII++GQTY+R I +W+ +GH TCPKT Q L + PN +K
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALK 365
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 399
LI WC +G ++ E T+S + + K
Sbjct: 366 NLIVQWCTASG-----------------ISYESEFTDSPNESFASALPTKAA-------- 400
Query: 400 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDE 459
+ +++ ++ +Y L +G Q +IRLL K +
Sbjct: 401 ---------------VEANKATVSILIKY------LADGSQAAQTVA-AREIRLLAKTGK 438
Query: 460 EARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAG---- 515
E R + G + L R L S N+ AQE A+ NL++ +NK ++ G
Sbjct: 439 ENRAYIAEAGAIPHLCRLLTS----ENAIAQENSVTAMLNLSIYE-KNKSRIMEEGDCLE 493
Query: 516 -VIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLD 574
++ +L ++ AA L+ + + K I V L L + T + K D
Sbjct: 494 SIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTP-RGKKD 552
Query: 575 ALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPG--DPMWTEKSLAVLLNLAASAAGKE 631
A+ ALYNLST P N ++ G +S L +L G + +L V +L A A GKE
Sbjct: 553 AVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKE 612
Query: 632 EMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC-NGNEKCCQMVLQEGVIPALV-SIS 689
+ V+GL ++ G +E AV+ L LC +G + VL+ I L+ ++
Sbjct: 613 D-----SAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLL 667
Query: 690 VNGSTRGRDKAQRLLMLFREQ 710
G+ R R KA L +F+ +
Sbjct: 668 FTGTKRARRKAASLARVFQRR 688
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 140/266 (52%), Gaps = 12/266 (4%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 509
++RLL K + + R+ G +G +V L+ L S +S QE AL NL++N+N K
Sbjct: 564 ELRLLAKHNMDNRIVIGNSGAIVLLVELLYST----DSATQENAVTALLNLSINDNNKKA 619
Query: 510 LMLAAGVIPL---LEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGK 566
+ A + PL LE S + + AAT +LS +++ K IG S A+ LV+L G
Sbjct: 620 IADAGAIEPLIHVLENGSSEAKENSAAT--LFSLSVIEENKIKIGQSGAIGPLVDLL-GN 676
Query: 567 TEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAAS 626
+ K DA AL+NLS N ++ +G + L L P M +K++AVL NLA
Sbjct: 677 GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGM-VDKAVAVLANLATI 735
Query: 627 AAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALV 686
G+ + G + L V++ G +E A + L L + + C MVLQEG +P LV
Sbjct: 736 PEGRNAIGQEGG-IPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLV 794
Query: 687 SISVNGSTRGRDKAQRLLMLFREQRQ 712
++S +G+ R R+KAQ LL FR QR
Sbjct: 795 ALSQSGTPRAREKAQALLSYFRNQRH 820
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 285 CPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIAS 344
CP+SL++M DPVI++SGQTYE+ I++W+ G CPKT+Q L H L PNY VK LIA+
Sbjct: 236 CPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIAN 295
Query: 345 WCEMNGVSVPDSPPDSLDLN 364
WCE N V +PD P S LN
Sbjct: 296 WCETNDVKLPD-PNKSTSLN 314
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 187/443 (42%), Gaps = 66/443 (14%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
PEE RCP+S +LM DPV++ASGQTY+++ I+KWLS G+ TCPKTQQ LPH LTPN ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 399
+I+ WC+ NG LE
Sbjct: 135 EMISKWCKKNG---------------------------------------------LETK 149
Query: 400 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDE 459
+ N+ E + + E N++ + NL + + +++RLL +
Sbjct: 150 SQYHPNLVNEDETVTRSDREIFNSLLCKVS--------SSNLQDQKSAAKELRLLTRKGT 201
Query: 460 EARVFTGANGFVVALLRFLESAVCERN--SYAQEIGAMALFNLAVNNNRNKELMLA-AGV 516
E R G + + R + + N QE L N++++++ NK+L+ V
Sbjct: 202 EFRALFGESPDEIT--RLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNV 259
Query: 517 IPLLEKMISNSN--SHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLD 574
IPLL + + A A LS LD K +IG S + L++L + K D
Sbjct: 260 IPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIK-D 318
Query: 575 ALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMN 634
A++ L N + G + L G ++ ++ LA+L L EE+
Sbjct: 319 VAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNG--LYVDELLAILAMLVTHWKAVEELG 376
Query: 635 STPGLVSGLATVLDTGELIE-QEQAVSCLFLLC-NGNEKCCQMVLQEGVIPALVSISVNG 692
G VS L + E +E A+ L +C + K ++ +E + +S G
Sbjct: 377 ELGG-VSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREG 435
Query: 693 STRGRDKAQRLLMLFREQRQRDH 715
++R + KA +L R+ H
Sbjct: 436 TSRAQRKANGILDRLRKAMNLTH 458
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 196/433 (45%), Gaps = 71/433 (16%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPISL LM DPV+ ++GQTY+R I +W+ +GHSTCP + Q L L PN ++
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALR 357
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 399
LI+ WC + G+ DSP ES + + SC
Sbjct: 358 SLISQWCGVYGLQY-DSP---------------ESNEGMAECVAASCS------------ 389
Query: 400 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEG-ENLGQKCNIVEQIRLLLKDD 458
++ N R + +L +G EN+ K ++IRLL K
Sbjct: 390 ---------------SRAAMEANKATARI--LVRMLEDGSENV--KAVAAKEIRLLAKTG 430
Query: 459 EEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIP 518
++ R F G + L R L S + AQE AL NL++ +M G +
Sbjct: 431 KQNRAFIADLGAIPLLCRLLLS----NDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLR 486
Query: 519 LLEKMISNSNSHGA---ATALYLNLSFLDDAKPIIGSSHAVPFLVE-----LCKGKTEHQ 570
L+ ++ N + A A A +LS + + K +I + P VE L KG + +
Sbjct: 487 LIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNE---PGAVEELASMLTKGTS--R 541
Query: 571 CKLDALHALYNLSTIPSNIPNLL-SAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAG 629
K DA+ AL+NLST P + +L S +++ +QSL + +E++ L L +
Sbjct: 542 GKKDAVMALFNLSTHPESSARMLESCAVVALIQSLR---NDTVSEEAAGALALLMKQPSI 598
Query: 630 KEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC-NGNEKCCQMVLQ-EGVIPALVS 687
+ S+ +++ L ++ G +E AVS L+ +C G Q V + G+ + +
Sbjct: 599 VHLVGSSETVITSLVGLMRRGTPKGKENAVSALYEICRRGGSALVQRVAKIPGLNTVIQT 658
Query: 688 ISVNGSTRGRDKA 700
I++NG+ R + KA
Sbjct: 659 ITLNGTKRAKKKA 671
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 146/324 (45%), Gaps = 44/324 (13%)
Query: 277 PLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNY 336
P+ PE RCPISL+LM DPVI+++GQTYER I+KWL GH TCPK+Q+ L H LTPNY
Sbjct: 246 PVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNY 305
Query: 337 CVKGLIASWCEMNGVSVPD------------SPPDSLDLNY---------------WRLA 369
+K LIA WCE NG+ +P S D + R A
Sbjct: 306 VLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAA 365
Query: 370 LSEESTNSKSNEIVRSCKLKEMKVVPLEV------SGTIEESEYNDIENIYAQEDESGNN 423
E +K N R C + E +PL V +E + N+ E G
Sbjct: 366 AGELRLLAKRNVDNRVC-IAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAI 424
Query: 424 V-FERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAV 482
V D + VL G ++ L + D E +V GA G + AL+ LE
Sbjct: 425 VDAGAITDIVEVLKNGSMEARENAAATLFSLSVID--ENKVAIGAAGAIQALISLLE--- 479
Query: 483 CERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSH--GAATALYLNL 540
E ++ A A+FNL + NK + G++ L +++ ++ A A+ L
Sbjct: 480 -EGTRRGKKDAATAIFNLCIYQG-NKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAIL 537
Query: 541 SFLDDAKPIIGSSHAVPFLVELCK 564
S + K I + ++P LVE+ +
Sbjct: 538 STNQEGKTAIAEAESIPVLVEIIR 561
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 15/265 (5%)
Query: 450 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 509
++RLL K + + RV G + L+ L S + QE AL NL++N NK
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLSSP----DPRTQEHSVTALLNLSINEG-NKG 422
Query: 510 LMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKT 567
++ AG I + +++ N + A A +LS +D+ K IG++ A+ L+ L + T
Sbjct: 423 AIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGT 482
Query: 568 EHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASA 627
+ K DA A++NL N + GI+ L L +++LA+L L+ +
Sbjct: 483 -RRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQ 541
Query: 628 AGKE---EMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPA 684
GK E S P LV ++ TG +E A + L+ LC GN + + + G A
Sbjct: 542 EGKTAIAEAESIPVLVE----IIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVA 597
Query: 685 LVSISVNGSTRGRDKAQRLLMLFRE 709
L ++ NG+ R + KA LL L ++
Sbjct: 598 LKELTENGTDRAKRKAASLLELIQQ 622
>sp|Q0WUF6|PUB41_ARATH U-box domain-containing protein 41 OS=Arabidopsis thaliana GN=PUB41
PE=2 SV=1
Length = 559
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 209/491 (42%), Gaps = 71/491 (14%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGH------STCPKTQQKLPHLCLT 333
P E CPI+ LM DPV+++SGQT+ER+ ++ + G+ T P +P+L +
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMK 91
Query: 334 P---NYC---------------VKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEEST 375
++C V+G++ + + + P P D + L
Sbjct: 92 STIFSWCDRQKVDHPRPPDAAYVEGVVRARMDKDPNPSPGQSPGPGDKDPEPEILPPVEE 151
Query: 376 NSKSN-----EIVRSCKLKEMKVVPLEVSGTIEESEYNDIE--------------NIYAQ 416
NS S+ E +R+ M S TI +S Y+ + ++A
Sbjct: 152 NSPSDYDAVMEAIRARSKNSMSPTTSLESVTIGQSSYHPVRAVSMFSSSTTSSSSGVFAG 211
Query: 417 EDESGNNVFERY-------------QDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARV 463
D N ++ N L + + ++ +R + + E+ RV
Sbjct: 212 ADSPFRNAMSFSSTDHSSSPMSPEEEEIFNKLRGTDIFDHEQGLI-LLRKMTRSSEDLRV 270
Query: 464 FTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKM 523
+ +L FL S + R + Q A ++ NL++ +NK ++ +G +PLL +
Sbjct: 271 SLCTD----RILSFLRSLLVSRYNLVQTNAAASVVNLSLEK-QNKVKIVRSGFVPLLIDV 325
Query: 524 ISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALY 580
+ + + A AL+ +L+ D+ K +IG AV L+ + + + DA ALY
Sbjct: 326 LKSGTTEAQEHVAGALF-SLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALY 384
Query: 581 NLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEM---NSTP 637
+LS IPSN L+ AG + L S+ GD T + L VL NLAA GK M N+
Sbjct: 385 HLSLIPSNRTRLVRAGAVPTLLSMVRSGDS--TSRILLVLCNLAACPDGKGAMLDGNAVA 442
Query: 638 GLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGR 697
LV L V +E V+ L LC GN + + + G L+ + NG+ R +
Sbjct: 443 ILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVK 502
Query: 698 DKAQRLLMLFR 708
+KA ++L+ R
Sbjct: 503 EKASKILLAMR 513
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 145/298 (48%), Gaps = 14/298 (4%)
Query: 418 DESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRF 477
D+SG + L G N K +IR L + E RV G G + LL
Sbjct: 464 DDSGTMTTSHTIKLVEDLKSGSN-KVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSL 522
Query: 478 LESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHG---AAT 534
L S QE AL NL+++ NK +++ G I L +++ N +A
Sbjct: 523 LYS----EEKLTQEHAVTALLNLSISE-LNKAMIVEVGAIEPLVHVLNTGNDRAKENSAA 577
Query: 535 ALYLNLSFLDDAKPIIGSSHA-VPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLL 593
+L+ +LS L + IG S+A + LV L GK + K DA AL+NLS N ++
Sbjct: 578 SLF-SLSVLQVNRERIGQSNAAIQALVNLL-GKGTFRGKKDAASALFNLSITHDNKARIV 635
Query: 594 SAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELI 653
A + L L P D +K++A+L NL+A G++ + G + L +D G
Sbjct: 636 QAKAVKYLVELLDP-DLEMVDKAVALLANLSAVGEGRQAIVREGG-IPLLVETVDLGSQR 693
Query: 654 EQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQR 711
+E A S L LC + K C +VLQEG IP LV++S +G+ R ++KAQ+LL FR QR
Sbjct: 694 GKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQR 751
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 276 MPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPN 335
+ +PP RCP+S +LM DPVI+ASGQT++R I+KWL +G + CP+T+Q L H L PN
Sbjct: 236 ISIPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPN 294
Query: 336 YCVKGLIASWCEMNGVSV 353
Y VK +IASW E N +++
Sbjct: 295 YTVKAMIASWLEANRINL 312
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 163/682 (23%), Positives = 267/682 (39%), Gaps = 161/682 (23%)
Query: 57 LHIALEKAKNILHHCSECSKLYLAITGDSVLLKFEKARSALAESLRRVEDIVP------- 109
+ I +++ K+++ CS SKL+L + D V F + L L V DI+P
Sbjct: 96 MQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNFHE----LVTDLSTVLDILPLHDFDLS 151
Query: 110 ---QSIGCQILEIVNELETIAFSLDPSEKQVGDDIIALLQQGRKFNDSNDNNELESFHQA 166
Q + + + ++ + D + ++ D IA G K S D++ L
Sbjct: 152 DDAQDLISLLTKQCSDSVQFVDARDVALRRKVTDTIA----GIKHQISPDHSTLIKIFN- 206
Query: 167 ATRLGITSSRAALTERRALKKLIERARVEEDKRKESIVAYLLHLMRKYSKLFRSEMIDDN 226
LG++ S A+LT+ +++L + + + D R +S A L+ L+R YSK
Sbjct: 207 --DLGLSDS-ASLTDE--IQRLEDEIQDQIDDRSKSAAASLIGLVR-YSKCVLY------ 254
Query: 227 DSQGSTPCSPTIQCSFEDGVHNGNEHAFDRQLSKLCSFNFRPNNRRSGQMPLP--PEELR 284
P +P P+ RR + P + R
Sbjct: 255 -----GPSTPA------------------------------PDFRRHQSLSDANIPADFR 279
Query: 285 CPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIAS 344
CPI+L+LM DPV++A+GQTY+R I+ W+ GH+TCPKT Q L H L PN +K LI
Sbjct: 280 CPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVL 339
Query: 345 WC-------EMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLE 397
WC E+ G + P CK + ++ +
Sbjct: 340 WCRDQKIPFELYGDGGGEPAP---------------------------CK-EAVEFTKMM 371
Query: 398 VSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKD 457
VS IE+ D S VFE L L + + + + C I E
Sbjct: 372 VSFLIEKLSVAD----------SNGVVFE-----LRALAKSDTVARAC-IAEA------- 408
Query: 458 DEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAM-ALFNLAVNNNRNKELMLAAG- 515
G + L+R+L + C + +I A+ + NL++ +M G
Sbjct: 409 -----------GAIPKLVRYLATE-CP----SLQINAVTTILNLSILEQNKTRIMETDGA 452
Query: 516 ---VIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIG-SSHAVPFLVELCK-GKTEHQ 570
VI +L + AA L+ +L+ + + +G + V LV+L K G T
Sbjct: 453 LNGVIEVLRSGATWEAKANAAATLF-SLAGVSAYRRRLGRKARVVSGLVDLAKQGPT--S 509
Query: 571 CKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMW-TEKSLAVLLNLAASAAG 629
K DAL A+ NL N+ + AG+ + GD + ++ G
Sbjct: 510 SKRDALVAILNLVAERENVGRFVEAGV------MGAAGDAFQELPEEAVAVVEAVVRRGG 563
Query: 630 KEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC--NGNEKCCQMVLQEGVIPALVS 687
+++ L+ L V+ G +E A + L +C G+E +M G+ +
Sbjct: 564 LMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIERVIWE 623
Query: 688 ISVNGSTRGRDKAQRLLMLFRE 709
+ G+ RG KA L+ R
Sbjct: 624 MIGAGTARGGRKAASLMRYLRR 645
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 193/456 (42%), Gaps = 76/456 (16%)
Query: 278 LPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYC 337
L ++LRCPISL++M DPV++ SG TY+R I KW + G+ TCPKT + L L N+
Sbjct: 277 LNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFS 336
Query: 338 VKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLE 397
VK +I S+ + NGV + +D+ +L+ E + E +
Sbjct: 337 VKQVIQSYSKQNGVVMGQKGKKKVDVAE---SLAAEEAGKLTAEFLAG------------ 381
Query: 398 VSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKC----NIVEQIRL 453
E I E+E + E + +L + + C +VE +
Sbjct: 382 -------------ELIKGDEEEMVKALVE-----IRILTKTSTFYRSCLVEAGVVESLMK 423
Query: 454 LLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLA 513
+L+ D+ R+ A + ++ + + ++ G + L +N+ +E
Sbjct: 424 ILRSDD-PRIQENA---MAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRE---- 475
Query: 514 AGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGS-SHAVPFLVELCK----GKTE 568
S + AA YL S L D +IG S A+P LV + K G +
Sbjct: 476 -------------SRQYAAAALFYL--SSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSA 520
Query: 569 HQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPM---WTEKSLAVLLNLAA 625
+ L A+ +L L P N +L+AGI+ L L V + + T S+A+L +A
Sbjct: 521 KRNALIAIRSL--LMNQPDNHWRILAAGIVPVLLDL-VKSEEISDGVTADSMAILAKMAE 577
Query: 626 SAAGKEEMNSTPGLVSGLATVLDTGEL--IEQEQAVSCLFLLCN--GNEKCCQMVLQEGV 681
G + GL + +L + E+ ++ V+ L LC+ G++ + +
Sbjct: 578 YPDGMISVLRRGGLKLAV-KILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSI 636
Query: 682 IPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPP 717
+ +L + S NG G KA L+ + E ++R P
Sbjct: 637 MGSLYTASSNGELGGGKKASALIKMIHEFQERKTGP 672
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 184/465 (39%), Gaps = 85/465 (18%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P RCPISL LM DPV I++GQTY+R I+ W++ G++TCP T+ L L PN+ ++
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLR 74
Query: 340 GLIASWC---EMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRS--CKLKEMKVV 394
LI WC NGV +P D R LS+ S + ++ VRS ++ ++
Sbjct: 75 RLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRLR-- 132
Query: 395 PLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLL 454
G +SE N VL G N + +R+L
Sbjct: 133 -----GLARDSEKN------------------------RVLIAGHNAREIL-----VRIL 158
Query: 455 LKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQE---IGAMA--LFNLAVNNNRNKE 509
D E + + +ALL L E + A + +G M LF+ ++ N
Sbjct: 159 FADIETTSLSSELVSESLALLVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAA 218
Query: 510 LMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPII-GSSHAVPFLVELCKGKTE 568
L+E +++ + S D K II GS +++L K
Sbjct: 219 --------ALIEMVLTGAKSM--------------DLKLIISGSDSIFEGVLDLLKNPIS 256
Query: 569 HQCKLD-ALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTEKSLAVLLNLA-- 624
+ L + A++ L + +SAG L LA D TE+ LA + L
Sbjct: 257 SRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRL 316
Query: 625 --ASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVI 682
AA E + P +V + V D E A L LC E+C G++
Sbjct: 317 PEGCAAFGEHALTVPLMVKTILRVSDRA----TEYAAGALLALCTAEERCRDEAAAAGLV 372
Query: 683 PALVSISVNGST-RGRDKAQRLLMLFREQRQRDHPPVDIGQQDDD 726
L+ + + T R + KAQ LL L RD P D DD
Sbjct: 373 TQLLLLVQSDCTERAKRKAQMLLKLL-----RDSWPDDSTVHSDD 412
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 181/428 (42%), Gaps = 72/428 (16%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P + RCPISL++M DPVI+ SG T++R+ I++W+ G+ TCP T KLP L TP
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPIT--KLP-LSETPYL--- 59
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 399
+P+ SL LN+ ++L +ES+ ++ +
Sbjct: 60 -------------IPNHALRSLILNFAHVSL-KESSRPRTQQ------------------ 87
Query: 400 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDE 459
E S I +S +N K + ++ L K D
Sbjct: 88 ---EHSHSQSQALISTLVSQSSSN------------------ASKLESLTRLVRLTKRDS 126
Query: 460 EARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPL 519
R +G V A L ++S N QE L NL++ ++ NK ++A GVI
Sbjct: 127 SIRRKVTESGAVRAALDCVDSC----NQVLQEKSLSLLLNLSLEDD-NKVGLVADGVIRR 181
Query: 520 LEKM--ISNSNSHGAATALYLNLSFLDDAKPIIGS-SHAVPFLVELCKGKTEHQCKLDAL 576
+ + + + + A L +L+ ++ K IGS A+ LV L + + + K ++
Sbjct: 182 IVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERK-ESA 240
Query: 577 HALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNST 636
ALY L + P N ++ G + L A G E+++ VL L G+EEM+
Sbjct: 241 TALYALCSFPDNRKRVVDCGSVPILVEAADSG----LERAVEVLGLLVKCRGGREEMSKV 296
Query: 637 PGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRG 696
G V L VL G L + ++ L LC + + V +EGV+ N S +
Sbjct: 297 SGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDEVKREGVVEICFGFEDNESEKI 356
Query: 697 RDKAQRLL 704
R A L+
Sbjct: 357 RRNATILV 364
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDG-HSTCPKTQQKLPHLCLTPNYCV 338
P RCPISL+LM DPV + +GQTY+R IE W+S G ++TCP T+ L L PN+ +
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 339 KGLIASWC---EMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRS 385
+ LI WC NGV +P D R LS+ S + ++ VRS
Sbjct: 75 RRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 124
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 123/294 (41%), Gaps = 40/294 (13%)
Query: 278 LPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYC 337
L E+L CPISL++M DPV+I +G TY+R I KW G+ TCP T + L L N
Sbjct: 287 LKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVS 346
Query: 338 VKGLIASWCEMNGV----------SVPDSPPDSLDLN---------------------YW 366
V+ +I C+ NG+ S D P+SL +
Sbjct: 347 VRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIY 406
Query: 367 RLALSEESTNSKSNEIVRSCKLKEMKVVPL-----EVSGTIEESEYNDIENIYAQEDESG 421
R A+ E +K++ RSC +K V PL V I+E+ I N+
Sbjct: 407 R-AVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKS 465
Query: 422 NNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESA 481
E + + +LNEG + + L ++ +R+ + L+ ++
Sbjct: 466 KIAGEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGD 525
Query: 482 VCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATA 535
+ A+ +A+ L + ++ N +LAAG +P+L ++ + G TA
Sbjct: 526 --DYGDSAKRSALLAVMGLLMQSD-NHWRVLAAGAVPILLDLLRSGEISGGLTA 576
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E +C +S +M DPVII SGQTYE+ I +WL + TCP +Q L +CLTPN+ +
Sbjct: 75 PKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL-NHDLTCPTAKQVLYRVCLTPNHLIN 133
Query: 340 GLIASWCEMNGVSVPDSPPDSLD 362
LI WC N P P +D
Sbjct: 134 ELITRWCLANKYDRPAPKPSDID 156
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 484 ERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--SHGAATALYLNLS 541
+ N QE ALFN++ L VIPLL K + + + AT +LS
Sbjct: 227 DSNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLS 286
Query: 542 FLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNL 582
+D K IIG+S A+ L++L + DAL A+ +L
Sbjct: 287 DIDSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDL 327
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 268 PNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKL 327
P + ++ +PPE +CPIS+ LM DPVII++G TY+R+ IE W++ G+ TCP T L
Sbjct: 21 PESEPESEITIPPE-FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVL 79
Query: 328 PHLCLTPNYCVKGLIASWCEMNG 350
PN+ ++ +I WC G
Sbjct: 80 TTFDQIPNHTIRKMIQGWCVEKG 102
>sp|Q9FL17|PUB40_ARATH U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40
PE=2 SV=2
Length = 550
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 191/471 (40%), Gaps = 53/471 (11%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P E CPIS LM DP+I++SG +YER C+ + G + P + PN +K
Sbjct: 59 PAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPDFS----TVIPNLALK 114
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 399
I SWCE P P +S LAL E+ + + ++ ++ P V
Sbjct: 115 SAIHSWCERRCFP-PPKPLNSAAAEKLILALMEKKPQRRKVSVSEKELIQAIRDKP-SVR 172
Query: 400 GTIEESEYNDIENIYAQEDESGNNVFERYQDFL-------------------NVLNEGEN 440
+E + N + + R N+ E E
Sbjct: 173 LNHAATELDRRPNYFNSSSDESIASSSRTLQLTTKPSCFSSPSSGEIESLEPNLTPEEEA 232
Query: 441 L--GQKCNIVEQI-------RLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQE 491
L K N + +I R + + DE +R+ + A L+S + R + Q
Sbjct: 233 LLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISA----LKSLIVSRYATVQV 288
Query: 492 IGAMALFNLAVNNNRNKELMLAAGVIPLLEKMIS----NSNSHGAATALYLNLSFLDDAK 547
L NL++ + NK ++ +G++P L ++ + H A + +L+ D+ K
Sbjct: 289 NVTAVLVNLSLEKS-NKVKIVRSGIVPPLIDVLKCGSVEAQEHSA--GVIFSLALEDENK 345
Query: 548 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
IG + L+ L + TE + D+ ALY+LS + SN L+ G + L +
Sbjct: 346 TAIGVLGGLEPLLHLIRVGTE-LTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSL 404
Query: 608 GDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC- 666
G + + L +L N+A+ + + + G V + VL + + SC+ +L
Sbjct: 405 GQMIG--RVLLILCNMASCPVSRPALLDSGG-VECMVGVLRRDREVNESTRESCVAVLYG 461
Query: 667 ---NGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRD 714
+G + + + + LV + +G R + KA+R+L + R + + D
Sbjct: 462 LSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVLRAKIEDD 512
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 245 GVHNGNEHAFDRQLSKLC-------SFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVI 297
+++ NE++ S LC SFN P + PP++ CPI+ Q+ DPV
Sbjct: 470 SMNHENENSLILNGSSLCESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVT 529
Query: 298 IASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCL-TPNYCVKGLIASWCEMN 349
+ +GQTYER I++WL G++TCP T+Q L L NY +K LI SW E N
Sbjct: 530 LETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYVLKRLITSWKEQN 582
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P + +CPIS +LM DPVIIASG TY+R IEKW G+ TCP T L L PN+ ++
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 340 GLIASWC 346
+I WC
Sbjct: 94 RMIQGWC 100
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 39/331 (11%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P CPISL+ M DPV + +GQTYER+ I KW + GH TCP T Q+L +TPN +
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 340 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVP---- 395
LI +W V + D A+ T K+ R L E+K +
Sbjct: 125 HLIYTWFSQKYVLMKKRSED-----VQGRAIEILGTLKKAKGQARVHALSELKQIVIAHL 179
Query: 396 LEVSGTIEESEYNDIENIYA---------------------QEDESGNNVFERYQDFLNV 434
+ +EE + I ++ + +SG + +++
Sbjct: 180 MARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVDM 239
Query: 435 LNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGA 494
LN+G N K N IR L+++ ++ +V L+R ++ RN + A
Sbjct: 240 LNDGSN-ETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKR-HRNGVSP---A 294
Query: 495 MALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIG--- 551
+ L + + + LM++ G +P L ++ + + AL++ + D + +
Sbjct: 295 LRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKD 354
Query: 552 SSHAVPFLVELCKGKTEHQCKLDALHALYNL 582
S++ +P+ V + +E+ C AL L+++
Sbjct: 355 SANTIPYTVRVLMRVSEN-CTNYALSILWSV 384
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKL-PHLCLTPNYC 337
PP++ CPI+ Q+ DPV + +GQTYER I++WL G++TCP T+Q L ++ NY
Sbjct: 513 PPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYV 572
Query: 338 VKGLIASWCEMN 349
+K LI SW E N
Sbjct: 573 LKRLIVSWKEQN 584
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 275 QMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDG-HSTCPKTQQKLPHLCLT 333
++ +PP L CPISL++M DPVI+++G TY+R IEKWL G ++CP T+Q + LT
Sbjct: 9 EIEIPPFFL-CPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 334 PNYCVKGLIASWCEMNG 350
PN+ ++ LI SWC +N
Sbjct: 68 PNHTLRRLIQSWCTLNA 84
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDG-HSTCPKTQQKLPHLCLTPNYCV 338
P CPISL +M DPVI+++G TY+R IEKWL G ++CP T+Q + LTPN+ +
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67
Query: 339 KGLIASWCEMNG 350
+ LI SWC +N
Sbjct: 68 RRLIQSWCTLNA 79
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCL-TPNYC 337
PP++ CPI+ Q+ DPV + +GQTYER I++WL G++TCP T+Q L L NY
Sbjct: 511 PPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYV 570
Query: 338 VKGLIASWCEMN 349
+K LI SW E N
Sbjct: 571 LKRLITSWKEQN 582
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E C +S +M +PVIIASGQTYE+ I +WL TCPKT+Q L H PN+ +
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLIS 131
Query: 340 GLIASWCEMN 349
LI WC +N
Sbjct: 132 DLITQWCLVN 141
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 10/225 (4%)
Query: 490 QEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--SHGAATALYLNLSFLDDAK 547
QE ALFNL++ + + VIPLL K + + A A +LS +D K
Sbjct: 227 QENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNK 286
Query: 548 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 607
IIG+S AV L++L + K +A ++NL + N ++SAG+I
Sbjct: 287 IIIGNSEAVKALIDLIEEGDLLATK-EATSTVFNLCIVLENKGKVVSAGLIHAATKKIKA 345
Query: 608 GDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDT-GELIEQEQAVSCLFLLC 666
G + ++ L++L ++ EEM+ G + L ++L L+ E AV +F +
Sbjct: 346 GSNV--DELLSLLALISTHNRAVEEMDKL-GFIYDLFSILRKPSSLLTGENAVVIVFNMY 402
Query: 667 NGNEKCCQMVL---QEGVIPALVSISVNGSTRGRDKAQRLLMLFR 708
+ N ++ + +E ++ GS R KAQ +L +
Sbjct: 403 DRNRDRSRLKVVGEEENQHGTFTKLAKQGSVRAARKAQGILQWIK 447
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%)
Query: 275 QMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTP 334
++P P CPISL+ M DPV + +GQTYER I KW + GH TCP T Q+L +TP
Sbjct: 56 ELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTP 115
Query: 335 NYCVKGLIASW 345
N + LI +W
Sbjct: 116 NKTLHQLIYTW 126
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E C +S ++M +P++IASGQT+E+ I +WL TCP+T+Q L H + PN+ +
Sbjct: 66 PKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIPNHLIN 124
Query: 340 GLIASWCEMNGVSVPDSPPDSLDL 363
+I WC ++ P + + +DL
Sbjct: 125 EVIKEWCLIHNFDRPKTSDEVIDL 148
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 516 VIPLLEKMISN----SNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQC 571
V+PLL K + + H AAT +LS+ D K IIG+S + L+ + + + +
Sbjct: 242 VLPLLAKYMKQGTVLTRIHSAATVN--SLSYTDSNKIIIGNSEVLKALIHVIE-EGDSLA 298
Query: 572 KLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGK- 630
+A AL NL + +S G+I G ++++LL+L A + +
Sbjct: 299 TSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGS------NVSMLLSLLAFVSTQN 352
Query: 631 ----EEMNSTPGLVSGLATVL-DTGELIEQEQAVSCLFLLCNGNEKCCQMVLQE 679
EEM++ GL+ L ++L ++ L+ E AV ++ +C + +VL+E
Sbjct: 353 HQTTEEMDNL-GLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQNVVLRE 405
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P +CPISL +M PV +++G TY+R+ I++WL DG++TCP T Q L + PN +
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 340 GLIASWCE-MNGVSVPDSP 357
LI W + +N + +SP
Sbjct: 72 RLIDHWSDSINRRADSESP 90
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 40/80 (50%)
Query: 266 FRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQ 325
R RS + P+ CPISL++M DP + A G TYE I WL GH T P T
Sbjct: 312 LRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNT 371
Query: 326 KLPHLCLTPNYCVKGLIASW 345
KL H L PN ++ I W
Sbjct: 372 KLHHTKLVPNLALRSAIQEW 391
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLP-HLCLTPNYCV 338
P CPISL++M DPV SG TY+R I KWL S CP T+Q LP LTPN+ +
Sbjct: 11 PNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVPS-CPVTKQPLPLDSDLTPNHML 69
Query: 339 KGLIASWC---EMNGV---SVPDSPPDSLDL 363
+ LI WC E GV S P PP L++
Sbjct: 70 RRLIQHWCVENETRGVVRISTPRVPPGKLNV 100
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 338
PP CPIS ++M +P + A G TYE + +WL +GH T P T KL H L PN+ +
Sbjct: 497 PPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHAL 556
Query: 339 KGLIASWCEMNG 350
+ I W + N
Sbjct: 557 RSAIQEWLQRNS 568
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 338
PP+ CPI+ +M DP + A G TYE I +W GH T P ++LPH L PN +
Sbjct: 353 PPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLAL 412
Query: 339 KGLIASWCEM 348
+ I W ++
Sbjct: 413 RSAIQEWLQL 422
>sp|Q9FJP6|PUB38_ARATH U-box domain-containing protein 38 OS=Arabidopsis thaliana GN=PUB38
PE=1 SV=1
Length = 556
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 25/309 (8%)
Query: 420 SGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLE 479
S + E + N L E Q+ ++ +R + + ++EARV + +L L+
Sbjct: 218 STSTATEEDEVIYNKLKSSEIFDQEQGLI-MMRKMTRTNDEARVSLCSP----RILSLLK 272
Query: 480 SAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISN----SNSHGAATA 535
+ + R S Q +L NL+++ +NK ++ G +P+L ++ + + H A T
Sbjct: 273 NMIVSRYSLVQTNALASLVNLSLDK-KNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTI 331
Query: 536 LYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA 595
L+L DD K IG A+ L+ + + + D+ ALY+L+ +N L+
Sbjct: 332 FSLSLE--DDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRL 389
Query: 596 GIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEM---NSTPGLVSGLATVLDTGEL 652
G + L S+ G+ ++L V+ NLA + G+ M N+ LV L T E
Sbjct: 390 GAVPALFSMVRSGES--ASRALLVICNLACCSEGRSAMLDANAVAILVGKLREEW-TEEP 446
Query: 653 IE-------QEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLM 705
E +E V+ LF L + + + + + + L + G+ R R+KA+++L
Sbjct: 447 TEARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQ 506
Query: 706 LFREQRQRD 714
L RE+ D
Sbjct: 507 LMRERVPED 515
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPK---TQQKLPHLC-LTP 334
PP E CPIS +M DPV+++SGQT+ER+C++ + + PK ++ LP + P
Sbjct: 33 PPVEFLCPISKSVMSDPVVVSSGQTFERVCVQ--VCRDLNFIPKLNDDEESLPDFSNIIP 90
Query: 335 NYCVKGLIASWCEMNGVSVPDSPPD 359
N +K I +WC+ GVS P PPD
Sbjct: 91 NLNMKSTIDTWCDTVGVSRPQ-PPD 114
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%)
Query: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 338
PP CPI+ ++M DP A G TYE I KWLS GH T P T +L HL L PN +
Sbjct: 353 PPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRAL 412
Query: 339 KGLI 342
+ I
Sbjct: 413 RSAI 416
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P RCPISL +M PV + +G TY+R I++WL G++TCP T Q L + PN ++
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 340 GLIASW 345
LI W
Sbjct: 71 RLIEIW 76
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P +CPISL +M PV + +G TY+R I++WL G++TCP T Q L PN ++
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 340 GLIASWCEMNG 350
LI W + G
Sbjct: 73 RLINIWSDSIG 83
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 281 EELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKG 340
E+ +CPIS+++M DP + A G TYE KWL G T PKT + L + L PN+ ++
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 341 LIASWCEMN 349
+I W E N
Sbjct: 295 IIKDWLEKN 303
>sp|Q5ZMC3|WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus
gallus GN=WDSUB1 PE=2 SV=2
Length = 476
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 339
P+E CPI+ +LM DPVI A G +YE+ +E W+S+ + P T LP L LTPN +K
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNRTLK 464
Query: 340 GLIASWCE 347
I+ W E
Sbjct: 465 MAISRWLE 472
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 283,211,520
Number of Sequences: 539616
Number of extensions: 12043650
Number of successful extensions: 33206
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 32706
Number of HSP's gapped (non-prelim): 436
length of query: 775
length of database: 191,569,459
effective HSP length: 125
effective length of query: 650
effective length of database: 124,117,459
effective search space: 80676348350
effective search space used: 80676348350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)