Query 004075
Match_columns 775
No_of_seqs 229 out of 558
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 13:27:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004075.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004075hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w8oa1 b.1.18.2 (A:403-505) S 48.4 50 0.0036 27.1 9.6 72 666-753 12-85 (103)
2 d1jmxa3 b.1.18.14 (A:282-363) 47.9 24 0.0017 28.3 7.1 60 667-752 13-72 (82)
3 d1fnfa3 b.1.2.1 (A:1327-1415) 46.7 16 0.0012 28.1 5.9 25 727-752 13-37 (89)
4 d2ibga1 b.1.2.1 (A:573-667) He 40.5 13 0.00095 29.1 4.3 26 727-752 19-47 (95)
5 d1f86a_ b.3.4.1 (A:) Transthyr 39.5 11 0.0008 32.3 3.8 39 695-750 23-64 (115)
6 d2vn6a1 b.2.2.2 (A:12-152) Coh 36.0 1.2E+02 0.0086 25.5 10.6 109 666-774 10-140 (141)
7 d1aoha_ b.2.2.2 (A:) Cohesin d 35.8 1.2E+02 0.0089 25.6 11.3 89 666-754 10-121 (143)
8 d1vc1a_ c.13.2.1 (A:) Anti-sig 33.7 36 0.0026 27.4 6.2 39 518-556 4-42 (110)
9 d1x5la1 b.1.2.1 (A:8-105) Ephr 32.6 34 0.0025 26.9 5.8 47 727-774 16-64 (98)
10 d1wfna1 b.1.2.1 (A:8-113) Side 31.8 21 0.0016 28.3 4.4 9 730-738 26-34 (106)
11 d2fnba_ b.1.2.1 (A:) Fibronect 30.0 15 0.0011 28.6 3.0 8 731-738 22-29 (95)
12 d1fnfa2 b.1.2.1 (A:1236-1326) 29.9 32 0.0023 26.2 5.0 7 731-737 17-23 (91)
13 d2c9qa1 b.1.18.17 (A:1-102) Co 29.4 1.3E+02 0.0094 23.9 11.0 24 671-699 19-42 (102)
14 d1ko3a_ d.157.1.1 (A:) Zn meta 26.7 42 0.0031 30.1 6.0 49 67-124 38-86 (230)
15 d1fnaa_ b.1.2.1 (A:) Fibronect 26.5 26 0.0019 27.0 3.9 9 745-753 62-70 (91)
16 d1owwa_ b.1.2.1 (A:) Fibronect 25.0 37 0.0027 26.9 4.6 22 730-751 17-38 (93)
17 d1ix2a_ b.1.18.17 (A:) Copper 24.8 1.6E+02 0.011 23.4 10.4 26 671-701 18-43 (102)
18 d1x5ya1 b.1.2.1 (A:8-105) Myos 24.6 38 0.0027 26.7 4.6 10 730-739 17-26 (98)
19 d1oo2a_ b.3.4.1 (A:) Transthyr 23.9 14 0.001 31.6 1.8 41 694-751 23-66 (116)
20 d2gmna1 d.157.1.1 (A:29-292) Z 23.4 57 0.0041 30.3 6.4 47 69-124 29-76 (264)
21 d2c9qa1 b.1.18.17 (A:1-102) Co 22.7 52 0.0038 26.6 5.2 14 741-754 74-87 (102)
22 d1x8ha_ d.157.1.1 (A:) Zn meta 22.0 43 0.0032 30.2 5.1 49 67-124 23-71 (228)
23 d1tena_ b.1.2.1 (A:) Tenascin 21.7 63 0.0046 24.4 5.4 7 731-737 18-24 (90)
24 d1hfoa_ d.80.1.3 (A:) Micropha 20.5 53 0.0039 27.2 4.9 46 71-119 48-98 (113)
25 d1yx0a1 d.108.1.1 (A:1-151) Hy 20.5 56 0.0041 28.3 5.3 54 204-258 42-97 (151)
26 d2aioa1 d.157.1.1 (A:23-311) Z 20.1 50 0.0036 30.7 5.2 48 68-124 38-86 (266)
No 1
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]}
Probab=48.42 E-value=50 Score=27.12 Aligned_cols=72 Identities=17% Similarity=0.209 Sum_probs=41.7
Q ss_pred cccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEcCCCCeEEEeeCCCcceEEEEecCCCCCCceEEEEEEE--cCCCCCC
Q 004075 666 TFKRGDMVAVTFWSACPRNDLMTEGTFALVELLQGQNAWVPAYDDDDFCLKFKWSRPAKLSPQSHATVEWK--IPESAVS 743 (775)
Q Consensus 666 ~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~g~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti~W~--ip~~~~~ 743 (775)
...+|++++++..=-|--+.-.. ..-+.++- -. .|+. .+.... |-.-...+++|+ +|.++.+
T Consensus 12 ~v~pG~~~~~~vtVtN~g~~~~~-~~~~~~~~--P~-GW~v-----------~~~~~~-L~pG~s~~~~~~Vt~p~~a~~ 75 (103)
T d1w8oa1 12 ALEPGQQVTVPVAVTNQSGIAVP-KPSLQLDA--SP-DWQV-----------QGSVEP-LMPGRQAKGQVTITVPAGTTP 75 (103)
T ss_dssp EECTTCEEEEEEEEECCSSSCBS-SCEEEEEC--CT-TSEE-----------EEEECC-BCTTCEEEEEEEEECCTTCCC
T ss_pred eeCCCCeEEEEEEEEeCCCCcee-eeeEEEcC--CC-Cccc-----------cCccee-eCCCCcEEEEEEEECCCCCCC
Confidence 57889988877766555543333 33344442 23 4754 222222 222333555555 5889999
Q ss_pred cceeEEEeec
Q 004075 744 GVYRIRHFGA 753 (775)
Q Consensus 744 G~YRi~~~G~ 753 (775)
|+|+|...-.
T Consensus 76 G~Y~i~~~a~ 85 (103)
T d1w8oa1 76 GRYRVGATLR 85 (103)
T ss_dssp EEEEEEEEEE
T ss_pred ceEEEEEEEE
Confidence 9999987543
No 2
>d1jmxa3 b.1.18.14 (A:282-363) Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 {Pseudomonas putida [TaxId: 303]}
Probab=47.91 E-value=24 Score=28.26 Aligned_cols=60 Identities=10% Similarity=-0.019 Sum_probs=37.9
Q ss_pred ccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEcCCCCeEEEeeCCCcceEEEEecCCCCCCceEEEEEEEcCCCCCCcce
Q 004075 667 FKRGDMVAVTFWSACPRNDLMTEGTFALVELLQGQNAWVPAYDDDDFCLKFKWSRPAKLSPQSHATVEWKIPESAVSGVY 746 (775)
Q Consensus 667 y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~g~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti~W~ip~~~~~G~Y 746 (775)
.++|.++++++.|.|-.-...++.. +++.. +...+ -.+++++-.|++|.++|.|
T Consensus 13 ~q~G~~~evti~G~~L~~~~~l~~G-i~~~~---------------------v~~~~----~~~~~~~v~i~~d~p~G~h 66 (82)
T d1jmxa3 13 IKAGGESEITLVGSGLAGKPDLGAG-VEVTE---------------------VLEQT----PTLVRLKARAAADAKPGQR 66 (82)
T ss_dssp EETTCEEEEEEEEESCCSCEECCTT-EEEEE---------------------EEEEC----SSEEEEEEEECTTCCSEEE
T ss_pred cCCCCEEEEEEEecccCCccccCCC-cEEEE---------------------eeecC----CCeEEEEEEECCCCCCCcE
Confidence 5789999999999654332222222 11111 11111 2356778889999999999
Q ss_pred eEEEee
Q 004075 747 RIRHFG 752 (775)
Q Consensus 747 Ri~~~G 752 (775)
++|...
T Consensus 67 ~vrv~t 72 (82)
T d1jmxa3 67 EVAVGT 72 (82)
T ss_dssp EEEETT
T ss_pred EEEEEc
Confidence 999853
No 3
>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.69 E-value=16 Score=28.09 Aligned_cols=25 Identities=36% Similarity=0.591 Sum_probs=14.9
Q ss_pred CceEEEEEEEcCCCCCCcceeEEEee
Q 004075 727 PQSHATVEWKIPESAVSGVYRIRHFG 752 (775)
Q Consensus 727 ~~s~~ti~W~ip~~~~~G~YRi~~~G 752 (775)
..+.++|.|+.|.+ +-.-|+|.|.-
T Consensus 13 t~~sv~l~W~~p~~-~~~~Y~i~~~~ 37 (89)
T d1fnfa3 13 TANSFTVHWIAPRA-TITGYRIRHHP 37 (89)
T ss_dssp CSSEEEEEEECCSS-CCSEEEEEEEC
T ss_pred cCCEEEEEEEeCCC-EEeeEEEEEEE
Confidence 35567777776543 33457777653
No 4
>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=40.47 E-value=13 Score=29.09 Aligned_cols=26 Identities=12% Similarity=0.189 Sum_probs=14.9
Q ss_pred CceEEEEEEEcCCCCCCc---ceeEEEee
Q 004075 727 PQSHATVEWKIPESAVSG---VYRIRHFG 752 (775)
Q Consensus 727 ~~s~~ti~W~ip~~~~~G---~YRi~~~G 752 (775)
..+.++|.|+.|.+...+ -|+|.|.-
T Consensus 19 s~tsv~l~W~~P~~~~~~~i~gY~i~y~~ 47 (95)
T d2ibga1 19 SETAVVLHWSLASDADEHLITGYYAYYRP 47 (95)
T ss_dssp SSSCEEEEEECCTTCCGGGCCEEEEEEEE
T ss_pred CCCEEEEEEEeeeeccCCcccccceeEee
Confidence 345677777766543322 27777754
No 5
>d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.45 E-value=11 Score=32.25 Aligned_cols=39 Identities=18% Similarity=0.310 Sum_probs=24.6
Q ss_pred EEEEcCCCCeEEEe---eCCCcceEEEEecCCCCCCceEEEEEEEcCCCCCCcceeEEE
Q 004075 695 VELLQGQNAWVPAY---DDDDFCLKFKWSRPAKLSPQSHATVEWKIPESAVSGVYRIRH 750 (775)
Q Consensus 695 Ver~~~~g~W~~v~---~D~dw~t~~~W~r~~~~~~~s~~ti~W~ip~~~~~G~YRi~~ 750 (775)
+.++..+|.|+.++ ||+|= ++. +|....+..+|+|||++
T Consensus 23 L~~~~~~~~~~~i~~~~Td~dG----------------Ri~-~~~~~~~~~~G~Y~l~F 64 (115)
T d1f86a_ 23 VFRKAADDTWEPFASGKTSESG----------------ELH-GLTTEEEFVEGIYKVEI 64 (115)
T ss_dssp EEEECTTSCEEEEEEEECCTTS----------------EEC-CSCCTTTCCSEEEEEEE
T ss_pred EEEECCCCCEEEEEEEEeCCCC----------------ccc-CccCcccCCCeEEEEEE
Confidence 34666677788764 44442 333 45455566889999986
No 6
>d2vn6a1 b.2.2.2 (A:12-152) Cohesin domain {Clostridium cellulolyticum [TaxId: 1521]}
Probab=36.04 E-value=1.2e+02 Score=25.50 Aligned_cols=109 Identities=11% Similarity=0.095 Sum_probs=68.0
Q ss_pred cccCCCeEEEEEEccCCCC---------CCCCCCCeEEEEEEcCC---CCeEE--EeeCCCcceEEEEecCCC----C-C
Q 004075 666 TFKRGDMVAVTFWSACPRN---------DLMTEGTFALVELLQGQ---NAWVP--AYDDDDFCLKFKWSRPAK----L-S 726 (775)
Q Consensus 666 ~y~~g~~v~~~F~~a~Prn---------~l~~~~tf~~Ver~~~~---g~W~~--v~~D~dw~t~~~W~r~~~----~-~ 726 (775)
+..+|++|++...--|..+ .+..+.+.|++.....+ ..|.. -.+..+=..+|.|....+ . .
T Consensus 10 s~~~G~tV~V~V~~~~v~~~~~i~~~~~~i~yDp~~L~~~~v~~g~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~~~i~~ 89 (141)
T d2vn6a1 10 NGKPGDTVTVPVTFADVAKMKNVGTCNFYLGYDASLLEVVSVDAGPIVKNAAVNFSSSASNGTISFLFLDNTITDELITA 89 (141)
T ss_dssp EECTTCEEEEEEEEESTTTTTCBCEEEEEEECCTTTEEEEEEEECTTCTTHHHHEEEEEETTEEEEEEECTTSSSSCBCS
T ss_pred EeCCCCEEEEEEEEEccCCCCceEEEEEEEEeCCCeEEEEeeeccccccCCccceEEecCCCEEEEEEEccCCCcceecC
Confidence 4677999998776655432 23345566776654322 12321 123333347788876432 1 2
Q ss_pred CceEEEEEEEcCCCCCCcceeEEEeeccc---CCCCCeeeeEEecceEEEe
Q 004075 727 PQSHATVEWKIPESAVSGVYRIRHFGASK---SLVGSISHFIGSSSAFVVA 774 (775)
Q Consensus 727 ~~s~~ti~W~ip~~~~~G~YRi~~~G~~k---~~~g~~~~~~g~s~~F~v~ 774 (775)
....++|+-+++++++.|.|-|...+... .-...+.+....+...+|.
T Consensus 90 ~g~ia~l~Fkv~~~a~~G~~~i~~~~~~~~~d~~~~~i~~v~~~~G~ItV~ 140 (141)
T d2vn6a1 90 DGVFANIKFKLKSVTAKTTTPVTFKDGGAFGDGTMSKIASVTKTNGSVTID 140 (141)
T ss_dssp CEEEEEEEEEECCCSSCEEEEEEEEEEEEEECTTSCBCSCEEEECEEEEEC
T ss_pred CcEEEEEEEEECCCCCCceEEEEECCccEEecCCCCeeeeEEecCEEEEEc
Confidence 35679999999999999999999877544 2245566666666666664
No 7
>d1aoha_ b.2.2.2 (A:) Cohesin domain {Clostridium thermocellum, cellulosome, various modules [TaxId: 1515]}
Probab=35.82 E-value=1.2e+02 Score=25.63 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=60.6
Q ss_pred cccCCCeEEEEEEccC-CCCCC-------CCCCCeEEEEEEcCCC---------CeEEEeeCCCcceEEEEecCCC----
Q 004075 666 TFKRGDMVAVTFWSAC-PRNDL-------MTEGTFALVELLQGQN---------AWVPAYDDDDFCLKFKWSRPAK---- 724 (775)
Q Consensus 666 ~y~~g~~v~~~F~~a~-Prn~l-------~~~~tf~~Ver~~~~g---------~W~~v~~D~dw~t~~~W~r~~~---- 724 (775)
+-++|++|++.-...+ |.+++ ..+.+.|+|.....+. .|....++.+-.+.+.|....+
T Consensus 10 ~~~~G~tv~V~V~~~~v~~~~v~~~~~~i~YD~~~Le~~~v~~G~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~~~~g~~ 89 (143)
T d1aoha_ 10 NAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIEIEPGELIVDPNPTKSFDTAVYPDRKMIVFLFAEDSGTGAY 89 (143)
T ss_dssp EECTTCEEEEEEEEESCCTTCBSEEEEEEECCTTTEEEEEEEECTTCCCSSHHHHEEEEEETTTTEEEEEEECTTSSSTT
T ss_pred EecCCCEEEEEEEEeccCCCceEEEEEEEEECCceeEEeeecccceecCCCCCceeEEEecCCCCeEEEEEeccCCCCcc
Confidence 4567999998775544 44433 3467777776543221 3556667777778888876432
Q ss_pred -CCC-ceEEEEEEEcCCCCCCcceeEEEeecc
Q 004075 725 -LSP-QSHATVEWKIPESAVSGVYRIRHFGAS 754 (775)
Q Consensus 725 -~~~-~s~~ti~W~ip~~~~~G~YRi~~~G~~ 754 (775)
..+ ...++|+-++..++++|+|-|.+.+.+
T Consensus 90 ~i~g~G~iatl~Fkv~~~a~~G~~~i~~~~~~ 121 (143)
T d1aoha_ 90 AITEDGVFATIVAKVKSGAPNGLSVIKFVEVG 121 (143)
T ss_dssp CBCSSEEEEEEEEEECTTCCSEEEEEEEEEEE
T ss_pred eEcCCcEEEEEEEEECCCCCCceEEEEEcccc
Confidence 112 268899999999999999999997644
No 8
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]}
Probab=33.66 E-value=36 Score=27.36 Aligned_cols=39 Identities=15% Similarity=0.354 Sum_probs=35.1
Q ss_pred eeEEEEEEcCEEEEecCCchhhhHHHHHHHHHHHHHHcC
Q 004075 518 LPVQILRIGQLVILNVPGEFTTMAGRRLRDAIKMALISG 556 (775)
Q Consensus 518 v~iqilriG~l~i~~vPgE~tt~aG~Rlr~~v~~~l~~~ 556 (775)
+.+.+..-.+..|+.+.||++.....++++.+.+.+...
T Consensus 4 ~~~~~~~~~~~~vv~l~G~l~~~~~~~~~~~l~~~~~~~ 42 (110)
T d1vc1a_ 4 LKLDIVEQDDKAIVRVQGDIDAYNSSELKEQLRNFISTT 42 (110)
T ss_dssp CEEEEEEETTEEEEEEESCBSTTTHHHHHHHHHHHHHHC
T ss_pred cEEEEEEECCEEEEEEEEEEEhHHHHHHHHHHHHHHhcC
Confidence 478889999999999999999999999999999887653
No 9
>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.59 E-value=34 Score=26.85 Aligned_cols=47 Identities=21% Similarity=0.364 Sum_probs=28.0
Q ss_pred CceEEEEEEEcCCCC--CCcceeEEEeecccCCCCCeeeeEEecceEEEe
Q 004075 727 PQSHATVEWKIPESA--VSGVYRIRHFGASKSLVGSISHFIGSSSAFVVA 774 (775)
Q Consensus 727 ~~s~~ti~W~ip~~~--~~G~YRi~~~G~~k~~~g~~~~~~g~s~~F~v~ 774 (775)
+.+.++|.|..|.+. +--.|+|+|.-.... .....-+.+....|.|.
T Consensus 16 s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~-~~~~~~~~~~~~~~~i~ 64 (98)
T d1x5la1 16 GQTSVSLLWQEPEQPNGIILEYEIKYYEKDKE-MQSYSTLKAVTTRATVS 64 (98)
T ss_dssp CSSCEEEEECCCSCCCSCCCEEEEEEEESSSC-CSSCEEEEESSSEEEEC
T ss_pred cCCEEEEEEECCCCCCCCEEEEEEEeeccccc-ceeeEEecCCceEEEEC
Confidence 456688999876542 113688888743322 22334456666677764
No 10
>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.79 E-value=21 Score=28.33 Aligned_cols=9 Identities=33% Similarity=0.848 Sum_probs=4.1
Q ss_pred EEEEEEEcC
Q 004075 730 HATVEWKIP 738 (775)
Q Consensus 730 ~~ti~W~ip 738 (775)
.++|.|+.|
T Consensus 26 sv~l~W~~P 34 (106)
T d1wfna1 26 SLKVSWQEP 34 (106)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEECC
Confidence 344555433
No 11
>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.00 E-value=15 Score=28.65 Aligned_cols=8 Identities=13% Similarity=0.405 Sum_probs=3.4
Q ss_pred EEEEEEcC
Q 004075 731 ATVEWKIP 738 (775)
Q Consensus 731 ~ti~W~ip 738 (775)
++|.|+.|
T Consensus 22 i~l~W~~p 29 (95)
T d2fnba_ 22 IGLRWTPL 29 (95)
T ss_dssp EEEECCCC
T ss_pred EEEEEEec
Confidence 44444433
No 12
>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.86 E-value=32 Score=26.21 Aligned_cols=7 Identities=29% Similarity=0.648 Sum_probs=2.8
Q ss_pred EEEEEEc
Q 004075 731 ATVEWKI 737 (775)
Q Consensus 731 ~ti~W~i 737 (775)
++|.|+.
T Consensus 17 v~l~W~~ 23 (91)
T d1fnfa2 17 MRVTWAP 23 (91)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 3444443
No 13
>d2c9qa1 b.1.18.17 (A:1-102) Copper resistance protein C (CopC, PcoC) {Pseudomonas syringae [TaxId: 317]}
Probab=29.40 E-value=1.3e+02 Score=23.94 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=14.4
Q ss_pred CeEEEEEEccCCCCCCCCCCCeEEEEEEc
Q 004075 671 DMVAVTFWSACPRNDLMTEGTFALVELLQ 699 (775)
Q Consensus 671 ~~v~~~F~~a~Prn~l~~~~tf~~Ver~~ 699 (775)
+.|+.+| ...+....+-+.|-...
T Consensus 19 ~~v~L~F-----~e~v~~~~s~~~l~~~~ 42 (102)
T d2c9qa1 19 AKIELHF-----SENLVTQFSGAKLVMTA 42 (102)
T ss_dssp SSEEEEE-----SSCCCTTTCEEEEEEEE
T ss_pred cEEEEEE-----CCccccccceEEEEecC
Confidence 4588889 34455555666665543
No 14
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]}
Probab=26.68 E-value=42 Score=30.08 Aligned_cols=49 Identities=18% Similarity=0.334 Sum_probs=31.5
Q ss_pred EEEEEEEeCCCCEEEEEEeccccccHHHHHHHHHHHHHHhCCCCCCCcEEEEecccCC
Q 004075 67 ARTFIVAEPQGNRVVFVNLDACMASQLVTIKVLERLKARYGDLYTEQNVAISGIHTHA 124 (775)
Q Consensus 67 ARAlvl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~rL~~~~G~~i~~~nViIsATHTHS 124 (775)
+.+++|++ ++. .|-+|.++ .....+++.+.+.+..| .+.. .|-.||.|.
T Consensus 38 ~N~~li~~--~~~--~vLID~g~-~~~~~~~~~~~i~~~~~--~~i~--~ii~TH~H~ 86 (230)
T d1ko3a_ 38 SNGLIVRD--GDE--LLLIDTAW-GAKNTAALLAEIEKQIG--LPVT--RAVSTHFHD 86 (230)
T ss_dssp EEEEEEEE--TTE--EEEESCCS-SHHHHHHHHHHHHTTTC--CCEE--EEECSSSSH
T ss_pred cEEEEEEe--CCE--EEEECCCC-CHHHHHHHHHHHHHhcC--CeeE--EEEECCCCc
Confidence 46778876 344 44567664 45556777888877667 4444 444799984
No 15
>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.46 E-value=26 Score=26.95 Aligned_cols=9 Identities=22% Similarity=0.453 Sum_probs=3.6
Q ss_pred ceeEEEeec
Q 004075 745 VYRIRHFGA 753 (775)
Q Consensus 745 ~YRi~~~G~ 753 (775)
.|.|+....
T Consensus 62 ~Y~~~V~a~ 70 (91)
T d1fnaa_ 62 DYTITVYAV 70 (91)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 344444433
No 16
>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.99 E-value=37 Score=26.94 Aligned_cols=22 Identities=18% Similarity=0.496 Sum_probs=12.0
Q ss_pred EEEEEEEcCCCCCCcceeEEEe
Q 004075 730 HATVEWKIPESAVSGVYRIRHF 751 (775)
Q Consensus 730 ~~ti~W~ip~~~~~G~YRi~~~ 751 (775)
.++|.|+.|.+..=-.|+|.|.
T Consensus 17 s~~vsW~~P~~~~i~~Y~i~y~ 38 (93)
T d1owwa_ 17 SHPIQWNAPQPSHISKYILRWR 38 (93)
T ss_dssp CEEEEEECCSSSCEEEEEEEEE
T ss_pred EEEEEeecccccceeEEEEEEe
Confidence 4666666654322234666665
No 17
>d1ix2a_ b.1.18.17 (A:) Copper resistance protein C (CopC, PcoC) {Escherichia coli [TaxId: 562]}
Probab=24.78 E-value=1.6e+02 Score=23.40 Aligned_cols=26 Identities=12% Similarity=0.163 Sum_probs=16.0
Q ss_pred CeEEEEEEccCCCCCCCCCCCeEEEEEEcCC
Q 004075 671 DMVAVTFWSACPRNDLMTEGTFALVELLQGQ 701 (775)
Q Consensus 671 ~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~ 701 (775)
++|+.+| ...++...+-+.|...+++
T Consensus 18 ~~I~L~F-----~e~v~~~~s~i~v~~~~g~ 43 (102)
T d1ix2a_ 18 EKIQLNF-----SENLTVKFSGAKLTMTGMK 43 (102)
T ss_dssp SCEEEEE-----SSCCCGGGCEEEEEEEECT
T ss_pred CEEEEEe-----CCccccccceEEEEeCCCc
Confidence 4588899 3455555566666554443
No 18
>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.63 E-value=38 Score=26.66 Aligned_cols=10 Identities=30% Similarity=1.013 Sum_probs=5.9
Q ss_pred EEEEEEEcCC
Q 004075 730 HATVEWKIPE 739 (775)
Q Consensus 730 ~~ti~W~ip~ 739 (775)
.++|.|..|.
T Consensus 17 sv~l~W~pP~ 26 (98)
T d1x5ya1 17 TTTLKWRPPD 26 (98)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 4666666544
No 19
>d1oo2a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Gilthead seabream (Sparus aurata) [TaxId: 8175]}
Probab=23.92 E-value=14 Score=31.59 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=24.2
Q ss_pred EEEEEcCCCCeEEEe---eCCCcceEEEEecCCCCCCceEEEEEEEcCCCCCCcceeEEEe
Q 004075 694 LVELLQGQNAWVPAY---DDDDFCLKFKWSRPAKLSPQSHATVEWKIPESAVSGVYRIRHF 751 (775)
Q Consensus 694 ~Ver~~~~g~W~~v~---~D~dw~t~~~W~r~~~~~~~s~~ti~W~ip~~~~~G~YRi~~~ 751 (775)
++.|++++|.|+.++ ||+|=- +. +|......++|+|||++.
T Consensus 23 ~L~~~~~~g~~~~i~~~~Td~dGR----------------i~-~~~~~~~~~~G~Yel~F~ 66 (116)
T d1oo2a_ 23 KVSQKTADGGWTQIATGVTDATGE----------------IH-NLITEQQFPAGVYRVEFD 66 (116)
T ss_dssp EEEEECTTSCEEEEEEEECCTTSC----------------CT-TCSCGGGCCSEEEEEEEC
T ss_pred EEEEECCCCCeEEEEEEEECCCCc----------------Cc-cccCcccccCeeEEEEEE
Confidence 345676777887664 555431 11 133334457899999875
No 20
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]}
Probab=23.41 E-value=57 Score=30.30 Aligned_cols=47 Identities=15% Similarity=0.412 Sum_probs=31.2
Q ss_pred EEEEEeCCCCEEEEEEeccccccHHHHHHHHHHHHHHhCCCCCCCcE-EEEecccCC
Q 004075 69 TFIVAEPQGNRVVFVNLDACMASQLVTIKVLERLKARYGDLYTEQNV-AISGIHTHA 124 (775)
Q Consensus 69 Alvl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~rL~~~~G~~i~~~nV-iIsATHTHS 124 (775)
+++|+. ++.+++ +|.+. + ...+.+++.|++ .| ++...| .|-.||.|.
T Consensus 29 ~~lI~~--~~~~vL--IDtG~-~-~~~~~~~~~i~~-~~--~~~~~I~~ii~TH~H~ 76 (264)
T d2gmna1 29 VYVIKT--SQGLIL--MDTAM-P-QSTGMIKDNIAK-LG--FKVADIKLILNTHAHL 76 (264)
T ss_dssp CEEEEE--TTEEEE--ECCCC-G-GGHHHHHHHHHH-TT--CCGGGEEEEECSCCSH
T ss_pred EEEEEE--CCEEEE--EcCCC-c-chHHHHHHHHHH-cC--CCchheEEEEECCCCc
Confidence 677776 344444 68765 2 235677888876 67 666666 678899984
No 21
>d2c9qa1 b.1.18.17 (A:1-102) Copper resistance protein C (CopC, PcoC) {Pseudomonas syringae [TaxId: 317]}
Probab=22.71 E-value=52 Score=26.56 Aligned_cols=14 Identities=21% Similarity=0.444 Sum_probs=6.9
Q ss_pred CCCcceeEEEeecc
Q 004075 741 AVSGVYRIRHFGAS 754 (775)
Q Consensus 741 ~~~G~YRi~~~G~~ 754 (775)
.++|+|+|.|+.-+
T Consensus 74 l~~G~Y~V~wrvvs 87 (102)
T d2c9qa1 74 LTAGTYKVDWRAVS 87 (102)
T ss_dssp CCSEEEEEEEEECC
T ss_pred CCCceEEEEEEEEe
Confidence 44555555555433
No 22
>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]}
Probab=22.02 E-value=43 Score=30.21 Aligned_cols=49 Identities=8% Similarity=0.047 Sum_probs=29.3
Q ss_pred EEEEEEEeCCCCEEEEEEeccccccHHHHHHHHHHHHHHhCCCCCCCcEEEEecccCC
Q 004075 67 ARTFIVAEPQGNRVVFVNLDACMASQLVTIKVLERLKARYGDLYTEQNVAISGIHTHA 124 (775)
Q Consensus 67 ARAlvl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~rL~~~~G~~i~~~nViIsATHTHS 124 (775)
..++++.+ ++.+++ +|... .....+++.+.|++..+ -+.. .|-.||.|.
T Consensus 23 ~N~~~i~~--~~g~vl--ID~g~-~~~~~~~l~~~i~~~~~--~~i~--~ii~TH~H~ 71 (228)
T d1x8ha_ 23 ENSMVYFG--AKGVTV--VGATW-TPDTARELHKLIKRVSR--KPVL--EVINTNYHT 71 (228)
T ss_dssp EEEEEEEC--SSCEEE--ESCCS-SHHHHHHHHHHHHTTCC--SCEE--EEECSSSSH
T ss_pred ceEEEEEE--CCEEEE--EeCCC-CHHHHHHHHHHHHHhcC--CCce--EEEECCCCc
Confidence 34666654 444444 58764 56667788888877333 2222 345689986
No 23
>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.66 E-value=63 Score=24.39 Aligned_cols=7 Identities=29% Similarity=0.615 Sum_probs=3.1
Q ss_pred EEEEEEc
Q 004075 731 ATVEWKI 737 (775)
Q Consensus 731 ~ti~W~i 737 (775)
++|.|+.
T Consensus 18 ~~l~W~~ 24 (90)
T d1tena_ 18 ALITWFK 24 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 4444443
No 24
>d1hfoa_ d.80.1.3 (A:) Microphage migration inhibition factor (MIF) {Trichinella spiralis [TaxId: 6334]}
Probab=20.51 E-value=53 Score=27.18 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=34.3
Q ss_pred EEEeCCCCEEEEEEecccc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEe
Q 004075 71 IVAEPQGNRVVFVNLDACM-ASQL----VTIKVLERLKARYGDLYTEQNVAISG 119 (775)
Q Consensus 71 vl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~rL~~~~G~~i~~~nViIsA 119 (775)
.+.. .....++|.+=.++ +.++ +..++-+.|++++| |+.++|+|.-
T Consensus 48 ~fgG-s~eP~a~~~l~sig~l~~~~n~~~s~~i~~~l~~~Lg--I~~~RiyI~f 98 (113)
T d1hfoa_ 48 SFGG-STNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLG--IPKNRMYIHF 98 (113)
T ss_dssp EETT-BCSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEE
T ss_pred EEcC-CCCcEEEEEEEEecCCChHHhHHHHHHHHHHHHHHcC--CCcceEEEEE
Confidence 3443 35678888887664 6665 55777778899999 9999999964
No 25
>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]}
Probab=20.48 E-value=56 Score=28.30 Aligned_cols=54 Identities=15% Similarity=0.021 Sum_probs=40.0
Q ss_pred CCCeeEEEEEEeCCCCeEEEEEeeeccccccCCCCCcccCch--HHHHHHHHHHHhh
Q 004075 204 VDKEMTLIKFVNEEWGPIGSFNWFATHGTSMSRTNPLISGDN--KGAAARFMEDWFE 258 (775)
Q Consensus 204 vD~~~~vLrf~~~dG~~ia~L~nyA~HpTsl~~~n~lIS~D~--~G~a~~~lE~~~~ 258 (775)
-+++..++-+++ ||+++|.+...-.......-....+..+| +|+++.+++....
T Consensus 42 ~~~~~~~~va~~-~~~~vG~~~~~~~~~~~~~i~~~~V~p~~Rg~Glg~~Ll~~~~~ 97 (151)
T d1yx0a1 42 RGPEITFWSAWE-GDELAGCGALKELDTRHGEIKSMRTSASHLRKGVAKQVLQHIIE 97 (151)
T ss_dssp SSSSCEEEEEEC-SSSEEEEEEEEEEETTEEECCCCCCSTTTCCSCHHHHHHHHHHH
T ss_pred cCCCeEEEEEEE-CCEEEEEEEEEeccCceEEEEeeeeCHHHHhCChhHHHHHHHHH
Confidence 345666666666 69999998776655555555667889997 8999999988764
No 26
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]}
Probab=20.11 E-value=50 Score=30.71 Aligned_cols=48 Identities=29% Similarity=0.435 Sum_probs=31.6
Q ss_pred EEEEEEeCCCCEEEEEEeccccccHHHHHHHHHHHHHHhCCCCCCCcE-EEEecccCC
Q 004075 68 RTFIVAEPQGNRVVFVNLDACMASQLVTIKVLERLKARYGDLYTEQNV-AISGIHTHA 124 (775)
Q Consensus 68 RAlvl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~rL~~~~G~~i~~~nV-iIsATHTHS 124 (775)
-+++|+. ++..++ +|.+.- ...+.+++.|++ .| ++...| .|--||.|.
T Consensus 38 ~~yli~~--~~g~vL--IDtG~~--~~~~~~~~~l~~-~G--~~~~~I~~Ii~TH~H~ 86 (266)
T d2aioa1 38 TALLVQT--PDGAVL--LDGGMP--QMASHLLDNMKA-RG--VTPRDLRLILLSHAHA 86 (266)
T ss_dssp CCEEEEE--TTEEEE--ECCBSG--GGHHHHHHHHHH-TT--CCGGGEEEEECSCCSH
T ss_pred EEEEEEe--CCEEEE--EeCCCc--hhhHHHHHHHHH-cC--CChHHeEEEEecCCCc
Confidence 5788877 344444 486542 345778888876 77 776666 355699997
Done!