Query 004076
Match_columns 775
No_of_seqs 362 out of 2480
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 13:29:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004076.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004076hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 3E-146 9E-151 1309.7 78.3 750 5-773 64-962 (967)
2 4fke_A Aminopeptidase N; zinc 100.0 2E-144 6E-149 1300.2 65.0 753 4-773 5-904 (909)
3 2xdt_A Endoplasmic reticulum a 100.0 3E-141 1E-145 1268.3 76.3 746 5-771 4-892 (897)
4 1z5h_A Tricorn protease intera 100.0 3E-129 1E-133 1148.5 58.8 686 14-760 1-777 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 2.9E-90 1E-94 819.2 53.7 625 6-678 9-790 (867)
6 3ebh_A PFA-M1, M1 family amino 100.0 5.1E-89 1.7E-93 799.4 57.3 510 11-548 11-550 (889)
7 3b34_A Aminopeptidase N; prote 100.0 1.3E-88 4.3E-93 802.1 56.6 511 5-553 31-571 (891)
8 3u9w_A Leukotriene A-4 hydrola 100.0 5.3E-82 1.8E-86 728.0 31.8 445 7-476 6-474 (608)
9 3cia_A Cold-active aminopeptid 100.0 6.4E-77 2.2E-81 685.3 33.7 431 6-465 18-464 (605)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 3.6E-77 1.2E-81 689.2 27.9 426 6-465 20-467 (632)
11 3rjo_A Endoplasmic reticulum a 100.0 1.4E-54 4.8E-59 479.6 31.2 299 456-772 1-410 (419)
12 4fgm_A Aminopeptidase N family 100.0 3.4E-28 1.2E-32 276.3 23.1 297 154-459 119-451 (597)
13 1bqb_A Protein (aureolysin); h 79.6 3.9 0.00013 41.4 7.5 103 234-340 68-178 (301)
14 1u4g_A Elastase, pseudolysin; 78.7 58 0.002 32.8 18.7 98 233-341 73-175 (301)
15 3cqb_A Probable protease HTPX 75.9 3 0.0001 35.2 4.7 70 239-317 27-99 (107)
16 2y3u_A Collagenase, collagenas 72.9 1.4 5E-05 50.5 2.5 39 301-339 422-469 (785)
17 3dnz_A Thermolysin; hydrolase, 72.3 5.4 0.00018 40.5 6.2 102 232-341 69-177 (316)
18 4ger_A Gentlyase metalloprotea 69.2 29 0.001 34.9 10.7 107 232-350 62-176 (304)
19 2vqx_A Metalloproteinase; ther 67.4 8.1 0.00028 39.8 6.4 100 233-341 90-197 (341)
20 3nqx_A MCP-02, secreted metall 64.4 64 0.0022 32.5 12.1 99 233-341 74-176 (306)
21 3ltj_A Alpharep-4; protein eng 58.6 1E+02 0.0035 28.2 12.3 91 557-660 27-117 (201)
22 1r55_A ADAM 33; metalloproteas 41.7 23 0.00079 33.8 4.5 14 300-313 135-148 (214)
23 1yp1_A FII; FII hydrolase; 1.9 36.7 40 0.0014 31.8 5.3 13 301-313 135-147 (202)
24 3c37_A Peptidase, M48 family; 36.2 41 0.0014 33.0 5.4 20 298-317 97-116 (253)
25 1bud_A Protein (acutolysin A); 36.0 45 0.0015 31.2 5.5 13 301-313 133-145 (197)
26 2w15_A Zinc metalloproteinase 35.1 49 0.0017 31.1 5.6 14 300-313 135-148 (202)
27 3isy_A Bsupi, intracellular pr 33.6 2.2E+02 0.0076 24.2 9.0 26 87-112 81-106 (120)
28 3ltj_A Alpharep-4; protein eng 33.3 92 0.0032 28.5 7.3 91 557-660 58-148 (201)
29 2ero_A VAP-1, vascular apoptos 32.0 54 0.0019 35.0 5.9 14 300-313 145-158 (427)
30 3ltm_A Alpha-REP4; protein eng 31.1 74 0.0025 29.5 6.3 165 557-747 32-201 (211)
31 3ltm_A Alpha-REP4; protein eng 30.0 1.5E+02 0.0052 27.2 8.3 89 558-659 64-152 (211)
32 1atl_A Atrolysin C; metalloend 28.8 42 0.0014 31.6 3.9 13 301-313 136-148 (202)
33 1qua_A Acutolysin-C, hemorrhag 28.5 43 0.0015 31.4 3.9 13 301-313 135-147 (197)
34 3iuk_A Uncharacterized protein 27.3 2.1E+02 0.0072 31.6 9.7 54 406-459 495-554 (562)
35 2nxp_A Transcription initiatio 26.7 43 0.0015 30.1 3.4 121 562-690 12-137 (156)
36 1kuf_A Atrolysin E, metallopro 26.0 44 0.0015 31.5 3.5 14 300-313 137-150 (203)
37 2e3x_A Coagulation factor X-ac 24.9 39 0.0013 36.1 3.2 14 300-313 138-151 (427)
38 2c9r_A COPC, copper resistance 24.8 2.3E+02 0.0079 23.2 7.3 23 85-108 64-86 (102)
39 3k7n_A K-like; SVMP, hydrolase 24.7 86 0.0029 33.1 5.8 14 300-313 138-151 (397)
40 2j49_A Transcription initiatio 24.0 1.5E+02 0.0051 26.3 6.4 109 572-690 5-119 (148)
41 2dw0_A Catrocollastatin; apopt 23.8 51 0.0018 35.1 3.9 14 300-313 136-149 (419)
42 3lmc_A Peptidase, zinc-depende 23.2 2.2E+02 0.0075 26.8 7.6 21 293-313 135-155 (210)
43 3e11_A Predicted zincin-like m 22.8 44 0.0015 28.3 2.4 34 278-313 69-102 (114)
44 1lyq_A PCOC copper resistance 22.5 2.5E+02 0.0086 23.0 7.1 23 85-108 66-88 (104)
45 3k7l_A Atragin; SVMP, metallop 22.1 84 0.0029 33.4 5.1 14 300-313 143-156 (422)
46 1oyz_A Hypothetical protein YI 22.0 2.4E+02 0.0083 27.2 8.5 98 557-665 141-238 (280)
47 4g26_A Pentatricopeptide repea 21.7 4.6E+02 0.016 28.2 11.3 92 562-663 109-205 (501)
48 4fca_A Conserved domain protei 20.5 74 0.0025 34.9 4.3 56 396-451 318-378 (525)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=2.7e-146 Score=1309.70 Aligned_cols=750 Identities=35% Similarity=0.632 Sum_probs=677.0
Q ss_pred CCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEeeeccCCCC--ccccCeeEEEe
Q 004076 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELV 82 (775)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v~~~~~~~~--~~~~~~~~~~~ 82 (775)
...+|||.+++|.||+|.|++|+++.+|+|+|+|++++.++++.|+||+.+|+|+++++.+..+... .........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 4568999999999999999999999999999999999999999999999999999999864321100 01111222333
Q ss_pred cCCeEEEEEeCCCcCCc-eEEEEEEEEeccCCCCcceEEEeecc-CCeeeeccccCCCCCCCCceeeccCCCCCeeEEEE
Q 004076 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (775)
Q Consensus 83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~l 160 (775)
..+.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678999999999999 89999999999999999999999976 78889999999999999999999999999999999
Q ss_pred EEEECCCCeEeeCCCccce-eecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccchHHHHHHH
Q 004076 161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (775)
Q Consensus 161 ~i~~p~~~~~isn~~~~~~-~~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 239 (775)
+|++|++|+|+|||++.++ ...+++++++|+.|+|||+||+||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345678899999999999999999999999988666779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhcCccC
Q 004076 240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (775)
Q Consensus 240 ~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 319 (775)
+.+++++||++||+|||++|+|+|++|+|+.||||||||++|++..+|++++.++...++.++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred cCccchhHHhhhHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhcccCCCCCeEeecCCcchhhhcccchhcchhhHHH
Q 004076 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (775)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (775)
|+||+|+|||||||+|++++++++.+|+|.+...++.+...++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999887777666557888999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhc---------------------------cCCCHHHHHHHhh
Q 004076 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 452 (775)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------~g~~l~~~~~~W~ 452 (775)
+||+..||++.|+++|+.|+++|+|++++++|||++++++ +|.||++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---------CCCeEEEEEEEEeccccceeeeEeeccceEEEecccccccc
Q 004076 453 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 523 (775)
Q Consensus 453 ~~~g~P~~~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (775)
.|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999989999999999875422 23589999999987655555677776666666542
Q ss_pred cCCCCCCceEEEccCceEEEEEecchhhHH--------------------------------------------------
Q 004076 524 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAA-------------------------------------------------- 553 (775)
Q Consensus 524 ~~~~~~~~wi~~N~~~~gyyrV~Yd~~~w~-------------------------------------------------- 553 (775)
.+ +||++|.++.||||||||+.+|.
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 44 89999999999999999999999
Q ss_pred ----------------------------------------------------HHHHHHhHHHHHHHHHhcCCHHHHHHHH
Q 004076 554 ----------------------------------------------------SHLDALLRGEIFTALALLGHKETLNEAS 581 (775)
Q Consensus 554 ----------------------------------------------------~~~~~~~R~~ll~~ac~~g~~~ci~~a~ 581 (775)
++.+.++|..++.+||.+|+++|+++|.
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~lR~~il~~ac~~g~~~c~~~A~ 771 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWSDKGSVWDRMLRSALLKLACDLNHAPCIQKAA 771 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSSCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 2345679999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Q 004076 582 KRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS 661 (775)
Q Consensus 582 ~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~ 661 (775)
++|++|++++....||||+|.. +||.|+++ +++|++||++|+++++++||..++.||||++|+++|+++|+++++
T Consensus 772 ~~f~~~~~~~~~~~i~~~lr~~---Vyc~~~~~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~ 846 (967)
T 3se6_A 772 ELFSQWMESSGKLNIPTDVLKI---VYSVGAQT--TAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELGME 846 (967)
T ss_dssp HHHHHHHHTTTCSCCCHHHHHH---HHHHHTTS--HHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCcccCChhhhhH---hHhhhhcc--HHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHHhC
Confidence 9999999875444699999994 55556653 899999999999999999999999999999999999999999998
Q ss_pred C-cccccceeeeee-Eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhhccCCCHHHHHHHHHHhhcCCCc-h
Q 004076 662 S-EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP-Y 735 (775)
Q Consensus 662 ~-~ir~qd~~~~~~-v~~~--g~~~~w~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~Ff~~~~~~-~ 735 (775)
+ .||.||...++. |+.| |+.++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+.++.. .
T Consensus 847 ~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~~~ 926 (967)
T 3se6_A 847 GKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQGS 926 (967)
T ss_dssp CSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSSSC
T ss_pred cCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCccch
Confidence 7 599999999999 8877 99999999999999999999854 678999999999999999999999999987654 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhhhcc
Q 004076 736 IARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR 773 (775)
Q Consensus 736 ~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~~~ 773 (775)
..++++|++|+|+.|++|++++.+. |.+||+.|.+|
T Consensus 927 ~~~~~~q~le~i~~ni~W~~~~~~~--i~~wl~~~~~~ 962 (967)
T 3se6_A 927 HLDIFQTVLETITKNIKWLEKNLPT--LRTWLMVNTRH 962 (967)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcccc
Confidence 5689999999999999999999988 99999998775
No 2
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=1.8e-144 Score=1300.19 Aligned_cols=753 Identities=35% Similarity=0.612 Sum_probs=670.1
Q ss_pred cCCCCCCCCCceeeEEEEEEEecCCC-----CeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEe--eeccCCCCccccC
Q 004076 4 FKGQPRLPKFAVPKRYDIRLTPDLTS-----CKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSV--SFTNKVSSKALEP 76 (775)
Q Consensus 4 ~~~~~rLp~~v~p~~Y~l~l~~~~~~-----~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v--~~~~~~~~~~~~~ 76 (775)
+.++||||++|+|+||+|.|++|++. .+|+|+|+|++++.++++.|+||+.+|+|+...+ .....+.......
T Consensus 5 P~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~~~~~~~~~ 84 (909)
T 4fke_A 5 PWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGVGDSQVPEI 84 (909)
T ss_dssp GGGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEESTTCCCCCE
T ss_pred CcccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecCCCcceecc
Confidence 34689999999999999999998653 5899999999999999999999999999976322 1111112233345
Q ss_pred eeEEEecCCeEEEEEeCCCcCCc-eEEEEEEEEeccCCCCcceEEEeeccCCeeeeccccCCCCCCCCceeeccCCCCCe
Q 004076 77 TKVELVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACK 155 (775)
Q Consensus 77 ~~~~~~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k 155 (775)
....++...+.++|.++++|++| .|+|+|.|+|.+++++.|||++.|.++|..+++++|||||++||+||||||||++|
T Consensus 85 ~~~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP~~K 164 (909)
T 4fke_A 85 DRTELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMK 164 (909)
T ss_dssp EEEEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCSTTSC
T ss_pred cceEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCccccc
Confidence 66778889999999999999999 89999999999999999999999998888899999999999999999999999999
Q ss_pred eEEEEEEEECCCCeEeeCCCcccee----ecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccc
Q 004076 156 ATFKITLDVPSELVALSNMPVIDEK----VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKAN 231 (775)
Q Consensus 156 a~f~l~i~~p~~~~~isn~~~~~~~----~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~ 231 (775)
|+|+|+|++|++|+|+|||++.++. .++++++++|+.|||||+||+||+||+|+.++..+.+|+++++|++|+..+
T Consensus 165 Atf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~~~ 244 (909)
T 4fke_A 165 ATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIA 244 (909)
T ss_dssp BEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHHHH
T ss_pred eEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecchhh
Confidence 9999999999999999999987652 246789999999999999999999999999887777899999999998654
Q ss_pred --hHHHHHHHHHHHHHHHHHHhCCCCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHH
Q 004076 232 --QGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 309 (775)
Q Consensus 232 --~~~~~l~~~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 309 (775)
+++++++.+++++++||++||+|||++|+|+|++|+|+.|||||||||+|++..+|++++.++...++.++.+||||+
T Consensus 245 ~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaHEl 324 (909)
T 4fke_A 245 EGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHEL 324 (909)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHHHH
Confidence 457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccCcCccchhHHhhhHHHHHHHHHHhhhCCchhHHHHHHHHHH-HHhhhcccCCCCCeEee---cCCcchhhh
Q 004076 310 AHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVE---VNHTGEIDE 385 (775)
Q Consensus 310 aHqWfGnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~---~~~~~~~~~ 385 (775)
|||||||+|||+||+|+|||||||+|++++++++.+|+|.++..|..... .++..|+..++||+..+ +.++.+++.
T Consensus 325 AHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~i~~ 404 (909)
T 4fke_A 325 AHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQISE 404 (909)
T ss_dssp HTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHHHHT
T ss_pred HhhhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhhHHh
Confidence 99999999999999999999999999999999999999999888877665 67889999999999875 567888999
Q ss_pred cccchhcchhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCC--------CHHHHHHHhhcCCCc
Q 004076 386 IFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE--------PVNKLMNSWTKQKGY 457 (775)
Q Consensus 386 ~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~g~--------~l~~~~~~W~~~~g~ 457 (775)
.|+.++|.||++|||||+..||++.|++||+.|+++|+|++++++|||++|++++|. ++++||++|++|+||
T Consensus 405 ~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~G~ 484 (909)
T 4fke_A 405 MFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGF 484 (909)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSCSC
T ss_pred hhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCccccCCC
Confidence 999999999999999999999999999999999999999999999999999999864 599999999999999
Q ss_pred ceEEEEEeCcEEEEEEEeeccCCCC-------CCCeEEEEEEEEeccccceeeeEeecc-ceEEEecccccccccCCCCC
Q 004076 458 PVISVKVKEEKLELEQSQFLSSGSP-------GDGQWIVPITLCCGSYDVCKNFLLYNK-SDSFDIKELLGCSISKEGDN 529 (775)
Q Consensus 458 P~~~v~~~~~~~~l~Q~rf~~~~~~-------~~~~w~iPl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 529 (775)
|+|+|+++.+. ++|+||+..... .+..|+|||++++...... ..++... .....+.. ...+
T Consensus 485 Pvv~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~- 553 (909)
T 4fke_A 485 PVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQD-HYWLRDVSQAQNDLFK-------TASD- 553 (909)
T ss_dssp EEEEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECC-CEEECSCSEEECGGGC-------CCTT-
T ss_pred cEEEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccc-eEEeeccccceeeecc-------CCCC-
Confidence 99999887765 678888764321 1347999999987543322 2333322 22222211 2344
Q ss_pred CceEEEccCceEEEEEecchhhHH--------------------------------------------------------
Q 004076 530 GGWIKLNVNQTGFYRVKYDKDLAA-------------------------------------------------------- 553 (775)
Q Consensus 530 ~~wi~~N~~~~gyyrV~Yd~~~w~-------------------------------------------------------- 553 (775)
+||++|.++.||||||||+++|.
T Consensus 554 -~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~y~~w~ 632 (909)
T 4fke_A 554 -DWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQ 632 (909)
T ss_dssp -CCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCSHHHHH
T ss_pred -CeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCccHHHHH
Confidence 89999999999999999999998
Q ss_pred -------------------------------------------------HHHHHHhHHHHHHHHHhcCCHHHHHHHHHHH
Q 004076 554 -------------------------------------------------SHLDALLRGEIFTALALLGHKETLNEASKRF 584 (775)
Q Consensus 554 -------------------------------------------------~~~~~~~R~~ll~~ac~~g~~~ci~~a~~~f 584 (775)
++.+.++|..++.+||.+|+++|+++|+++|
T Consensus 633 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lr~~~l~~ac~~g~~~c~~~a~~~f 712 (909)
T 4fke_A 633 AALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENLAKTLF 712 (909)
T ss_dssp HHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 2334678999999999999999999999999
Q ss_pred HHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCcHHHHHHHHHHhccC-c
Q 004076 585 HAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS-E 663 (775)
Q Consensus 585 ~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~~-~ 663 (775)
++|+.+++...||||+|. .+||.|+++|++++|+++|++|+++++++||..++.||||++|+++|+++|++++++ .
T Consensus 713 ~~~~~~~~~~~i~~dlr~---~vy~~~~~~g~~~~~~~l~~~~~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~~~~ 789 (909)
T 4fke_A 713 DQWMSDPENNPIHPNLRS---TIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDL 789 (909)
T ss_dssp HHHHTCTTSCCSCTTTHH---HHHHHHHHHSCHHHHHHHHHHHHHCCSHHHHHHHHHHHTTCCCHHHHHHHHHHTTCTTT
T ss_pred HHHhhCCCCCcCCHHHHH---HHHHHHHHhCCHHHHHHHHHHHHccCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhCCCC
Confidence 999998767789999999 566778889999999999999999999999999999999999999999999999986 6
Q ss_pred ccccceeeeee-Eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhhccCCCHHHHHHHHHHhhcCCC---chH
Q 004076 664 VRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCK---PYI 736 (775)
Q Consensus 664 ir~qd~~~~~~-v~~~--g~~~~w~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~Ff~~~~~---~~~ 736 (775)
||+||...++. |+.| |+.++|+|+++||+.|.++|+++ ..+.++|..+++.|+|+++++++++||+.++. +..
T Consensus 790 ir~qd~~~~~~~v~~n~~g~~~~~~f~~~n~~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~~ 869 (909)
T 4fke_A 790 IRKQDATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSG 869 (909)
T ss_dssp SCGGGHHHHHHHHHHSTTHHHHHHHHHHHHCTTTTTSSSSCCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCSSSCCGGG
T ss_pred CchhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCccccchH
Confidence 99999999999 8877 99999999999999999999865 67899999999999999999999999998764 346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhhhcc
Q 004076 737 ARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR 773 (775)
Q Consensus 737 ~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~~~ 773 (775)
.++++|++|+|+.|++|++++.+. |.+||++|..|
T Consensus 870 ~~~~~~~le~i~~n~~w~~~~~~~--i~~wL~~n~s~ 904 (909)
T 4fke_A 870 TRALEQALEKTKANIKWVKENKEV--VLNWFIEHSSH 904 (909)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHhcCcc
Confidence 799999999999999999999988 99999999776
No 3
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=3.4e-141 Score=1268.35 Aligned_cols=746 Identities=34% Similarity=0.620 Sum_probs=675.5
Q ss_pred CCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEeeeccCCCCccc--cCeeEEEe
Q 004076 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKAL--EPTKVELV 82 (775)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v~~~~~~~~~~~--~~~~~~~~ 82 (775)
.+++|||.+++|.||+|.|.+|+++.+|+|+++|++++.++++.|+||+.+|+|.++++.+.++ ..+ ....+..+
T Consensus 4 ~~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~---~~~~~~~~~~~~~ 80 (897)
T 2xdt_A 4 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAG---ERLSEEPLQVLEH 80 (897)
T ss_dssp CCCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC-------CEEEECEEEEE
T ss_pred cccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCC---cccccccceeEEc
Confidence 3569999999999999999999999999999999999998899999999999999999865211 112 23345566
Q ss_pred cCCeEEEEEeCCCcCCc-eEEEEEEEEeccCCCCcceEEEeecc-CCeeeeccccCCCCCCCCceeeccCCCCCeeEEEE
Q 004076 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (775)
Q Consensus 83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~l 160 (775)
..++.++|.++++|++| .++|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||.+||+||||||+|++||+|+|
T Consensus 81 ~~~~~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~i 160 (897)
T 2xdt_A 81 PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSI 160 (897)
T ss_dssp TTTTEEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEEE
T ss_pred CCCcEEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEEE
Confidence 77889999999999999 79999999999998899999999965 68888999999999999999999999999999999
Q ss_pred EEEECCCCeEeeCCCcccee-ecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccchHHHHHHH
Q 004076 161 TLDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (775)
Q Consensus 161 ~i~~p~~~~~isn~~~~~~~-~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 239 (775)
+|++|++|+|+|||++.++. ..+++++++|+.++|||+|++||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 161 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~ 240 (897)
T 2xdt_A 161 KIRREPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDA 240 (897)
T ss_dssp EEEECTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHH
T ss_pred EEEEcCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHH
Confidence 99999999999999988763 45678899999999999999999999999988656678999999999999899999999
Q ss_pred HHHHHHHHHHHhCCCCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhcCccC
Q 004076 240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (775)
Q Consensus 240 ~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 319 (775)
+.+++++|+++||+|||++|+|+|++|+|..||||||||++|++..+|++++.++...++.++.+||||+|||||||+||
T Consensus 241 ~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT 320 (897)
T 2xdt_A 241 AVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVT 320 (897)
T ss_dssp HHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEE
T ss_pred HHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999998888888999999999999999999999
Q ss_pred cCccchhHHhhhHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhcccCCCCCeEeecCCcchhhhcccchhcchhhHHH
Q 004076 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (775)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (775)
|+||+|+|||||||+|++++++++.+|++.++..|+.....++..|+...+||+..++.+|.++...|+.++|.||++||
T Consensus 321 ~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl 400 (897)
T 2xdt_A 321 MEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACIL 400 (897)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHHH
Confidence 99999999999999999999999999999888888544557788899999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhc-------------------c--------CCCHHHHHHHhh
Q 004076 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG-------------------S--------GEPVNKLMNSWT 452 (775)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~-------------------~--------g~~l~~~~~~W~ 452 (775)
+||+..||++.|+++|+.|+++|+|++++++|||++++++ + |.||++||++|+
T Consensus 401 ~mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~ 480 (897)
T 2xdt_A 401 NMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWT 480 (897)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999996 5 899999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---CCCeEEEEEEEEeccccceeeeEeeccceEEEecccccccccCCCCC
Q 004076 453 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDN 529 (775)
Q Consensus 453 ~~~g~P~~~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (775)
+|+|+|+++|++++++++|+|+||+.++.. ....|+|||+|.++++.....+|+..++.++.++ ..+
T Consensus 481 ~q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~---------~~~- 550 (897)
T 2xdt_A 481 LQKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILP---------EEV- 550 (897)
T ss_dssp SSCSEEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECS---------SCC-
T ss_pred cCCCceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEcc---------CCC-
Confidence 999999999999988999999999876432 2458999999987655545568887766666553 244
Q ss_pred CceEEEccCceEEEEEecchhhHH--------------------------------------------------------
Q 004076 530 GGWIKLNVNQTGFYRVKYDKDLAA-------------------------------------------------------- 553 (775)
Q Consensus 530 ~~wi~~N~~~~gyyrV~Yd~~~w~-------------------------------------------------------- 553 (775)
+||++|.++.||||||||+.+|+
T Consensus 551 -~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w~ 629 (897)
T 2xdt_A 551 -EWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVF 629 (897)
T ss_dssp -SCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHHH
T ss_pred -ceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 89999999999999999999998
Q ss_pred ----------------------------------------------HHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 004076 554 ----------------------------------------------SHLDALLRGEIFTALALLGHKETLNEASKRFHAF 587 (775)
Q Consensus 554 ----------------------------------------------~~~~~~~R~~ll~~ac~~g~~~ci~~a~~~f~~~ 587 (775)
++.+.++|..|+++||.+|+++|+++|+++|++|
T Consensus 630 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~lr~~~~~~ac~~g~~~c~~~a~~~f~~~ 709 (897)
T 2xdt_A 630 QGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTDEGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKW 709 (897)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTCCSSCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 2455788999999999999999999999999999
Q ss_pred hcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCcHHHHHHHHHHhccC-cccc
Q 004076 588 LADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS-EVRS 666 (775)
Q Consensus 588 ~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~~-~ir~ 666 (775)
+.++..+.||||+|. .+||.|+ |++++|++||++|+++++++||..++.||||++|+++|+++|++++++ .||.
T Consensus 710 ~~~~~~~~i~~~lr~---~vy~~~~--g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~c~~~~~~l~~~L~~~~~~~~i~~ 784 (897)
T 2xdt_A 710 KESNGNLSLPVDVTL---AVFAVGA--QSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKT 784 (897)
T ss_dssp HHTTTCSCCCHHHHH---HHHHHHT--TSHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSSSCG
T ss_pred hcCCCcCCCCcchhh---hEEEEec--CCHHHHHHHHHHHHccCCHHHHHHHHHHhccCCCHHHHHHHHHHHhCCCCCcH
Confidence 987544579999999 5556666 899999999999999999999999999999999999999999999975 6999
Q ss_pred cceeeeee-Eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhhccCCCHHHHHHHHHHhhcCCC-chHHHHHH
Q 004076 667 QDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCK-PYIARTLR 741 (775)
Q Consensus 667 qd~~~~~~-v~~~--g~~~~w~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~Ff~~~~~-~~~~~~~~ 741 (775)
||...++. ++.| |+.++|+|+++||+.|.++|+++ ..+.++|..+++.|+|+++++++++||+.++. ++..++++
T Consensus 785 qd~~~~~~~v~~n~~g~~~~~~~~~~n~~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~~~~~ 864 (897)
T 2xdt_A 785 QEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQLRCVQ 864 (897)
T ss_dssp GGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHHTGGGTTTCHHHH
T ss_pred HHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCccchhHHHHH
Confidence 99999999 8777 99999999999999999999854 57899999999999999999999999998643 35678999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHhhh
Q 004076 742 QSIERVQINAKWVESIRNEGHLAEAVKELA 771 (775)
Q Consensus 742 ~~le~i~~ni~W~~~~~~~~~i~~wl~~~~ 771 (775)
|++|+|+.|++|++++.+. |.+||+++.
T Consensus 865 ~~le~i~~n~~w~~~~~~~--i~~wl~~~~ 892 (897)
T 2xdt_A 865 QTIETIEENIGWMDKNFDK--IRVWLQSEK 892 (897)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCHHH--HHHHHHhhh
Confidence 9999999999999999988 999999863
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=3.4e-129 Score=1148.54 Aligned_cols=686 Identities=34% Similarity=0.598 Sum_probs=617.8
Q ss_pred ceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEeeeccCCCCccccCeeEEEecCCeEEEEEeC
Q 004076 14 AVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFA 93 (775)
Q Consensus 14 v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~ 93 (775)
|+|.||+|.|++++++.+|+|+++| + ++++.|+||+.+|+|.++++++. +..+.++. +.+.|.++
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g~---------~~~~~~~~--~~l~i~~~ 65 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNGR---------DTAFTYDG--QTVRAPGD 65 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETTE---------ECCCEECS--SEEEECCC
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEece---------eccEEEEC--CEEEEEeC
Confidence 6899999999999999999999999 4 67899999999999999998541 23344433 37777765
Q ss_pred CCcCCceEEEEEEEEeccCCCCcceEEEeeccCCeeeeccccCCCCCCCCceeeccCCCCCeeEEEEEEEECCCCeEeeC
Q 004076 94 ETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSN 173 (775)
Q Consensus 94 ~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~l~i~~p~~~~~isn 173 (775)
+|.++|+|.|+|.+++++.|||++.|. +++++|||||.+||+||||||+|++||+|+|+|++|++|+|+||
T Consensus 66 ----~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN 136 (780)
T 1z5h_A 66 ----SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISN 136 (780)
T ss_dssp ----SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEES
T ss_pred ----CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeC
Confidence 388999999999999989999999875 67889999999999999999999999999999999999999999
Q ss_pred CCccceeecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccchHHHHHHHHHHHHHHHHHHhCC
Q 004076 174 MPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAV 253 (775)
Q Consensus 174 ~~~~~~~~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~~g~ 253 (775)
|++.++ ..+++++++|+.++|||+|++||++|+|+.++.... |+++++|++|+ +.++++++.+++++++|+++||+
T Consensus 137 ~~~~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~-gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~ 212 (780)
T 1z5h_A 137 MPPKRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYR-DIDLILASLKD--IRSKYPLDMARKSVEFYENYFGI 212 (780)
T ss_dssp SCEEEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEET-TEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSS
T ss_pred Cccccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccC-CeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCC
Confidence 998765 456788999999999999999999999999886544 89999999998 66789999999999999999999
Q ss_pred CCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhcCccCcCccchhHHhhhHH
Q 004076 254 PYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFA 333 (775)
Q Consensus 254 ~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGfA 333 (775)
|||++|+|+|++|+|+.|||||||+++|++..++++ +.++...++.++.+||||+|||||||+|||+||+|+|||||||
T Consensus 213 ~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA 291 (780)
T 1z5h_A 213 PYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFA 291 (780)
T ss_dssp CCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHH
T ss_pred CCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHH
Confidence 999999999999999999999999999999989998 6677788889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhCCchhHHHHHHHHHH-HHhhhcccCCCCCeEeecCCcchhhhcccchhcchhhHHHHHHHHhhCHHHHH
Q 004076 334 TWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQ 412 (775)
Q Consensus 334 ~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~ 412 (775)
+|++++++++.+|+|.++.+|+.... .++..|+...+||+..++.++.+++..|+.++|.||++||+||+..||++.|+
T Consensus 292 ~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~ 371 (780)
T 1z5h_A 292 TFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFR 371 (780)
T ss_dssp HHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHH
Confidence 99999999999999998888876655 67888999999999988888988999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeCcEEEEEEEeeccCCCCCCCeEEEEEE
Q 004076 413 RSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPIT 492 (775)
Q Consensus 413 ~~l~~yl~~~~~~~~~~~df~~~l~~~~g~~l~~~~~~W~~~~g~P~~~v~~~~~~~~l~Q~rf~~~~~~~~~~w~iPl~ 492 (775)
++|+.|+++|+|++++++|||+++++++|.|+++||++|++|+|+|+++|++++++++|+|+||..++ .+...|+|||+
T Consensus 372 ~~l~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi~ 450 (780)
T 1z5h_A 372 KGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPVN 450 (780)
T ss_dssp HHHHHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEEE
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999998889999999998765 33458999999
Q ss_pred EEeccccceeeeEeeccceEEEecccccccccCCCCCCceEEEccCceEEEEEecchhhHH-------------------
Q 004076 493 LCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAA------------------- 553 (775)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyrV~Yd~~~w~------------------- 553 (775)
+ +.++. ...+ +.++ ++.++ .+ +||++|.++.||||||||+.+|.
T Consensus 451 ~-~~~~~-~~~~-l~~~--~~~~~----------~~--~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l~~i~~~~Ra~li~ 513 (780)
T 1z5h_A 451 I-KKKDG-VERI-LLED--EASIE----------AD--GLIKINADSAGFYRVLYDDATFSDVMGHYRDLSPLDRIGLVD 513 (780)
T ss_dssp E-EETTE-EEEE-EECS--SEEEE----------CT--TEEEESGGGCSSSEEECCHHHHHHHHHTGGGCCHHHHHHHHH
T ss_pred E-cCCCc-eeee-ccCc--eEEcc----------CC--ceEEEeCCCCEEEEEECCHHHHHHHHHHhccCCHHHHHHHHH
Confidence 9 44332 2334 5543 34443 23 79999999999999999999998
Q ss_pred ---------------------------------------H-----------------------------HHHHHhHHHHH
Q 004076 554 ---------------------------------------S-----------------------------HLDALLRGEIF 565 (775)
Q Consensus 554 ---------------------------------------~-----------------------------~~~~~~R~~ll 565 (775)
. +.+..+|..++
T Consensus 514 D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~r~~~~ 593 (780)
T 1z5h_A 514 DLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHAFDDDARAFCRSRMQFLTGKQDENLKIALGRVS 593 (780)
T ss_dssp HHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHH
Confidence 0 12345688899
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcC
Q 004076 566 TALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLAS 645 (775)
Q Consensus 566 ~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~~ 645 (775)
++||.+|+++|++ |+++|++| ..||||+|. .++|.++++|++ |++|+++|+++++++||..++.||||
T Consensus 594 ~~a~~~~~~~~~~-a~~~f~~~------~~i~~~lr~---~v~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~l~al~~ 661 (780)
T 1z5h_A 594 RLYVMVDESYAEE-MSKLFKDF------DSAEPEMRS---SIATAYALVTGD--LKGLLEKFRSVDRDEDRVRIISAFGK 661 (780)
T ss_dssp HHHHHHCHHHHHH-HHTTGGGG------GGSCHHHHH---HHHHHHHHHTCC--HHHHHHHHHSCCSHHHHHHHHHHHTT
T ss_pred HHHHhcCCHHHHH-HHHHHHhc------CCCCHHHHH---HHHHHHHHcCcH--HHHHHHHHhcCCCHHHHHHHHHHhcc
Confidence 9999999999999 99999998 249999999 556677788886 99999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhccCcccccceeeeee-Eccc--cHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHhhccCCCHHHHH
Q 004076 646 CPDVNIVLEVLNFLLSSEVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVR 722 (775)
Q Consensus 646 ~~d~~~l~~~L~~~l~~~ir~qd~~~~~~-v~~~--g~~~~w~fl~~n~~~i~~~~~~~~~l~~~i~~~~~~~~t~~~~~ 722 (775)
++|+++++++|++++++.||.||...++. ++.| |+.++|+|+++||+.|.+++++...+.+++..+ +.|+|++ ++
T Consensus 662 ~~~~~~~~~~l~~~~~~~i~~qd~~~~~~~~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~~~~i~~~-~~~~t~~-~~ 739 (780)
T 1z5h_A 662 LKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTVEMM-IPVIGLD-HP 739 (780)
T ss_dssp CCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTSHHHHHHHHHTHHHHHHHHHHHHCSSSHHHHHHHHH-HHHHHHH-CT
T ss_pred CCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHhCCchhHHHHHHhh-hccCCHH-HH
Confidence 99999999999999987799999999998 8766 999999999999999999998667889999999 9999999 99
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcCh
Q 004076 723 EVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNE 760 (775)
Q Consensus 723 ~~~~Ff~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~ 760 (775)
++++||+.++.++..++++|++|+|+.|++|++++.+.
T Consensus 740 ~~~~f~~~~~~~~~~~~~~~~~e~i~~n~~w~~~~~~~ 777 (780)
T 1z5h_A 740 DAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQT 777 (780)
T ss_dssp THHHHHHTTCCTTSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHccCCCccHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999998776778899999999999999999998765
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=2.9e-90 Score=819.22 Aligned_cols=625 Identities=19% Similarity=0.253 Sum_probs=507.9
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEeeeccCCCCccccCeeEEEecCC
Q 004076 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (775)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v~~~~~~~~~~~~~~~~~~~~~~ 85 (775)
.++|+|...+| ||+|+++++++..+++|+++|++. .+++.|+||+.+ +|.+|++++. +. .+..++
T Consensus 9 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g~---------~~--~~~~~~ 73 (867)
T 2gtq_A 9 KDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKINGA---------AA--DYVLEG 73 (867)
T ss_dssp GGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETTE---------EC--CCEEET
T ss_pred cccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECCe---------ec--ceEeeC
Confidence 56888887766 899999999988888888777743 447889999999 9999998642 12 233345
Q ss_pred eEEEEEeCCCcCCceEEEEEEEEecc--CCCCcceEEEeeccCCeeeeccccCCCCCCCCceeeccCCCCCeeEEEEEEE
Q 004076 86 EILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLD 163 (775)
Q Consensus 86 ~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~l~i~ 163 (775)
+.|+|. +|++|.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||+|+|++||+|+++|+
T Consensus 74 ~~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt 142 (867)
T 2gtq_A 74 ETLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIV 142 (867)
T ss_dssp TEEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEE
T ss_pred CEEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEEE
Confidence 677775 45568999999998864 45678999863 267899999999999999999999999999999
Q ss_pred ECCC-C-eEeeCCCccceee-cCceEEEEEeeCCCCcceEEEEEEeeeeEEeec--cc--CCeEEEEEEeCCccchHHHH
Q 004076 164 VPSE-L-VALSNMPVIDEKV-DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS--DGIKVRVYCQVGKANQGKFA 236 (775)
Q Consensus 164 ~p~~-~-~~isn~~~~~~~~-~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~--~~--~g~~v~v~~~~~~~~~~~~~ 236 (775)
+|++ | +++|||+++++.. .+++++++|+.++|||+|++||++|+|..++.. +. .++++++|++|+..+.++++
T Consensus 143 ~p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 222 (867)
T 2gtq_A 143 ADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFA 222 (867)
T ss_dssp EETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHH
T ss_pred EccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHH
Confidence 9997 6 8999999887643 567889999999999999999999999988752 22 24899999999998889999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhcC
Q 004076 237 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 316 (775)
Q Consensus 237 l~~~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 316 (775)
++.+++++++|+++||+|||++|+++|++|+|..||||||||++|++..++++++.++...++.+..+||||+|||||||
T Consensus 223 l~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGn 302 (867)
T 2gtq_A 223 VESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGN 302 (867)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999887777778889999999999999999
Q ss_pred ccCcCccchhHHhhhHHHHHHHHHHhhhCCch-hHHHHHHHHHHHHhhhcccCCCCCeEeecCCcchhhhcccchhcchh
Q 004076 317 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKG 395 (775)
Q Consensus 317 lVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg 395 (775)
+|||+||+|+|||||||+|++..+.....+.. ..+.........++..|+...+||+.. .++.+++..|+.++|.||
T Consensus 303 lVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~KG 380 (867)
T 2gtq_A 303 RVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEKG 380 (867)
T ss_dssp TBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHHH
T ss_pred EEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhHH
Confidence 99999999999999999999988887776532 111111101112466688888899864 235567888999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEe--CcE--EEE
Q 004076 396 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVK--EEK--LEL 471 (775)
Q Consensus 396 ~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~g~~l~~~~~~W~~~~g~P~~~v~~~--~~~--~~l 471 (775)
++||+||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++|+|+|+++|++. .+. ++|
T Consensus 381 a~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~l 459 (867)
T 2gtq_A 381 AEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELTV 459 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999995 79999999999999985 444 889
Q ss_pred EEEeeccCCCCCCCeEEEEEEEEecc--ccc-----------eeeeEeeccceEEEecccccccccCCCCCCceEEEccC
Q 004076 472 EQSQFLSSGSPGDGQWIVPITLCCGS--YDV-----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVN 538 (775)
Q Consensus 472 ~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~ 538 (775)
+|+++...+..+...|+|||++.+.+ +.. ...++++.++.++.++.+ ... .|+.+|.+
T Consensus 460 ~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~--p~~~l~r~ 530 (867)
T 2gtq_A 460 KQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGV-------TEA--VVPSLLRG 530 (867)
T ss_dssp EEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCC-------CSC--CEEEESTT
T ss_pred EEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCC-------CCC--CceEecCC
Confidence 99997644444455899999997643 211 123567777888888642 233 69999999
Q ss_pred ceEEEEEecchhhHH-----------------------------------------------------------------
Q 004076 539 QTGFYRVKYDKDLAA----------------------------------------------------------------- 553 (775)
Q Consensus 539 ~~gyyrV~Yd~~~w~----------------------------------------------------------------- 553 (775)
..+++||+|+-..+.
T Consensus 531 fs~~~~l~~~~~~~~l~~l~~~~~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~ 610 (867)
T 2gtq_A 531 FSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLDNAFKAL 610 (867)
T ss_dssp CCSSCEEECCCCHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCHHHHHH
T ss_pred CCccEEEECCCCHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCCHHHHHH
Confidence 999999997655444
Q ss_pred ---------------------------------------------H-H---------------HHHHhHHHHHHHHHhcC
Q 004076 554 ---------------------------------------------S-H---------------LDALLRGEIFTALALLG 572 (775)
Q Consensus 554 ---------------------------------------------~-~---------------~~~~~R~~ll~~ac~~g 572 (775)
. . ..+.||..+|+++|..|
T Consensus 611 ~l~lp~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~lr~~~l~~l~~~~ 690 (867)
T 2gtq_A 611 LLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVCRAFVLRAD 690 (867)
T ss_dssp HTCCCCHHHHTTTCSSBCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHHHHHHHHHhcC
Confidence 0 0 11466888999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCcHHHH
Q 004076 573 HKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIV 652 (775)
Q Consensus 573 ~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~~~~d~~~l 652 (775)
++|++.|.++|++...+ .+..++.++ +++...+.++++.++.++++|+.+....+|..++. ||+++|..+
T Consensus 691 -~~~~~~a~~~~~~~a~n--mt~~~~al~-----~l~~~~~~~~~~~~~~f~~~~~~~~~~~~k~~~~~--a~~~~~~~~ 760 (867)
T 2gtq_A 691 -PAHIETVAEKYGEMAQN--MTHEWGILS-----AVNGNESDTRNRLLAQFADKFSDDALVMDKYFALV--GSSRRSDTL 760 (867)
T ss_dssp -TTHHHHHHHTHHHHCSS--HHHHHHHHH-----HHTTCCSHHHHHHHHHHHHHTTTCHHHHHHHHHHH--HHCCSTTHH
T ss_pred -ccHHHHHHHHHHHhCCC--HhHHHHHHH-----HHHhcCcccHHHHHHHHHHHHcCCchHHHHHHHHH--hcCCChHHH
Confidence 99999999999966433 122333334 45554445667789999999999999999998888 788999999
Q ss_pred HHHHHHhccC--c-ccccceeeeee-Eccc
Q 004076 653 LEVLNFLLSS--E-VRSQDAVYGLA-VSIE 678 (775)
Q Consensus 653 ~~~L~~~l~~--~-ir~qd~~~~~~-v~~~ 678 (775)
++++.++.++ . .++++...++. ++.|
T Consensus 761 ~~v~~l~~~~~f~~~npn~~r~l~~~~~~n 790 (867)
T 2gtq_A 761 QQVRTALQHPKFSLENPNKARSLIGSFSRN 790 (867)
T ss_dssp HHHHHHTTSTTCCTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHhhCcCCCcCCchHHHHHHHHHhhC
Confidence 9999999987 4 45566555555 4433
No 6
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=5.1e-89 Score=799.45 Aligned_cols=510 Identities=23% Similarity=0.325 Sum_probs=427.6
Q ss_pred CCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEeeeccCCCCccccCeeEEEecCCeEEEE
Q 004076 11 PKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVL 90 (775)
Q Consensus 11 p~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v~~~~~~~~~~~~~~~~~~~~~~~~l~i 90 (775)
|..+...||+|+++++++...++|+++|++....+++.|+||+.+|+|.+|++++. .+. ....+..+++.|+|
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~------~l~-~~~~~~~~~~~L~I 83 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNK------KLV-EGEEYTYDNEFLTI 83 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTE------ECC-BTTTEEECSSEEEE
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCE------EcC-cccceEecCCEEEE
Confidence 55688899999999999999999999999886666789999999999999999652 111 00024455778999
Q ss_pred EeCCCcCCceEEEEEEEEecc--CCCCcceEEEeeccCCeeeeccccCCCCCCCCceeeccCCCCCeeEEEEEEEECCC-
Q 004076 91 EFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSE- 167 (775)
Q Consensus 91 ~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~l~i~~p~~- 167 (775)
.++. ++.+.++|+|.|+|.. ++.+.|+|++. .+++|||||.+||+||||||+|++||+|+++|++|++
T Consensus 84 ~l~~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~ 154 (889)
T 3ebh_A 84 FSKF-VPKSKFAFSSEVIIHPETNYALTGLYKSK--------NIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEK 154 (889)
T ss_dssp CGGG-SCSSSEEEEEEEEECGGGCTTCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTT
T ss_pred ecCC-CCCCcEEEEEEEEecCccCCCceeeEEEC--------CeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEcccc
Confidence 8765 6546899999999975 44678999864 2678999999999999999999999999999999997
Q ss_pred C-eEeeCCCcccee-ecCceEEEEEeeCCCCcceEEEEEEeeeeEEeec--cc-C--CeEEEEEEeCCccchHHHHHHHH
Q 004076 168 L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS-D--GIKVRVYCQVGKANQGKFALNVA 240 (775)
Q Consensus 168 ~-~~isn~~~~~~~-~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~--~~-~--g~~v~v~~~~~~~~~~~~~l~~~ 240 (775)
| +++|||+++++. ..+++++++|+.++|||+||+||+||+|+.++.. +. + ++++++|++|+..+.++++++.+
T Consensus 155 ~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~ 234 (889)
T 3ebh_A 155 YPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECL 234 (889)
T ss_dssp CCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHH
T ss_pred CeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHH
Confidence 8 579999988764 4567889999999999999999999999988743 11 3 48899999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhcCccCc
Q 004076 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (775)
Q Consensus 241 ~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 320 (775)
++++++||++||+|||++|+++|++|+|..||||||||++|++..+++++..++...++.+..+||||+|||||||+|||
T Consensus 235 ~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~ 314 (889)
T 3ebh_A 235 KKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTL 314 (889)
T ss_dssp HHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEE
T ss_pred HHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeee
Confidence 99999999999999999999999999999999999999999999999988877777788899999999999999999999
Q ss_pred CccchhHHhhhHHHHHHHHHHhhhCCchh-HHHHHHHHHHHHhhhcccCCCCCeEeecCCcchhhhcccchhcchhhHHH
Q 004076 321 EWWTHLWLNEGFATWVSYLAADSLFPEWK-IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (775)
Q Consensus 321 ~~w~d~WL~EGfA~y~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (775)
+||+|+|||||||+|++.++.+...+... .+.........++..|+...+||+.. .++.+++..|+.++|.||++||
T Consensus 315 ~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~vL 392 (889)
T 3ebh_A 315 RDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEVM 392 (889)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHHH
T ss_pred cccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHHH
Confidence 99999999999999999888877655421 11111111112466688888898853 2345678899999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcc-------CCCHHHHHHHhhcCCCcceEEEEEeC----c-
Q 004076 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGS-------GEPVNKLMNSWTKQKGYPVISVKVKE----E- 467 (775)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~-------g~~l~~~~~~W~~~~g~P~~~v~~~~----~- 467 (775)
|||+..||++.|+++|+.|+++|+|++++++|||+++++++ |.|++. |++|++|+|+|+|+|+++. +
T Consensus 393 rML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~ 471 (889)
T 3ebh_A 393 RMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQ 471 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTE
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCE
Confidence 99999999999999999999999999999999999999999 999996 6899999999999999863 2
Q ss_pred -EEEEEEEeeccCCCCCCCeEEEEEEEEecc---ccc---eeeeEeeccceEEEecccccccccCCCCCCceEEEccCce
Q 004076 468 -KLELEQSQFLSSGSPGDGQWIVPITLCCGS---YDV---CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQT 540 (775)
Q Consensus 468 -~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~ 540 (775)
+++|+|.++...+......|+|||++...+ +.. ...+.++..+.++.++.+ ... -++.+|.+..
T Consensus 472 ~~ltl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~-------~~~--p~~sl~r~fs 542 (889)
T 3ebh_A 472 YSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNI-------AVK--PIPSLFRGFS 542 (889)
T ss_dssp EEEEEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCC-------CSC--CEEEESTTCC
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCC-------CCC--CeEEEcCCCC
Confidence 688889887655544556899999997633 221 235677888889998742 122 4778999999
Q ss_pred EEEEEecc
Q 004076 541 GFYRVKYD 548 (775)
Q Consensus 541 gyyrV~Yd 548 (775)
+++|++|+
T Consensus 543 a~v~l~~~ 550 (889)
T 3ebh_A 543 APVYIEDQ 550 (889)
T ss_dssp SSSEEECC
T ss_pred ceEEEeCC
Confidence 99999976
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=1.3e-88 Score=802.07 Aligned_cols=511 Identities=22% Similarity=0.307 Sum_probs=428.9
Q ss_pred CCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEeeeccCCCCccccCeeEEEecC
Q 004076 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEA 84 (775)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v~~~~~~~~~~~~~~~~~~~~~ 84 (775)
..++|+|...+| ||+|+++++++..+++|+++|++... +++.|+||+.+|+|.+|++++. +.. .++.+
T Consensus 31 ~~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G~---------~l~-~y~~~ 98 (891)
T 3b34_A 31 RHDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHINDE---------PWT-AWKEE 98 (891)
T ss_dssp GGGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETTE---------ECC-SEEEE
T ss_pred hhhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcCE---------Ecc-eEEee
Confidence 356788776666 89999999999999999988887654 4678999999999999998642 111 34445
Q ss_pred CeEEEEEeCCCcCCceEEEEEEEEecc--CCCCcceEEEeeccCCeeeeccccCCCCCCCCceeeccCCCCCeeEEEEEE
Q 004076 85 DEILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL 162 (775)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~l~i 162 (775)
++.|+|. +| |+.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||+|+|++||+|+++|
T Consensus 99 ~~~L~I~---~l-p~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI 166 (891)
T 3b34_A 99 EGALVIS---NL-PERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTKI 166 (891)
T ss_dssp TTEEEEC---SC-CSEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEEE
T ss_pred CCEEEEE---eC-CCeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEEE
Confidence 5678876 34 36899999999864 45568999863 26789999999999999999999999999999
Q ss_pred EECCC-C-eEeeCCCccceee-cCceEEEEEeeCCCCcceEEEEEEeeeeEEeec--ccC--CeEEEEEEeCCccchHHH
Q 004076 163 DVPSE-L-VALSNMPVIDEKV-DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TSD--GIKVRVYCQVGKANQGKF 235 (775)
Q Consensus 163 ~~p~~-~-~~isn~~~~~~~~-~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~--~~~--g~~v~v~~~~~~~~~~~~ 235 (775)
++|++ | +++|||+++++.. .+++++++|+.++|||+|++||++|+|+.++.. +.+ ++++++|++|+..+.+++
T Consensus 167 ~~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~ 246 (891)
T 3b34_A 167 IADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPW 246 (891)
T ss_dssp EEETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHH
T ss_pred EeccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHH
Confidence 99997 6 8999999887643 567889999999999999999999999988742 222 489999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhc
Q 004076 236 ALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315 (775)
Q Consensus 236 ~l~~~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 315 (775)
+++.+++++++||++||+|||++|+++|++|+|..||||||||++|++..+++++...+...++.+..+||||+||||||
T Consensus 247 al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFG 326 (891)
T 3b34_A 247 AMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTG 326 (891)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999888777777888999999999999999
Q ss_pred CccCcCccchhHHhhhHHHHHHHHHHhhhCCchhHHHHHHH-HHH--HHhhhcccCCCCCeEeecCCcchhhhcccchhc
Q 004076 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD-ECT--EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISY 392 (775)
Q Consensus 316 nlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y 392 (775)
|+|||+||+|+|||||||+|++..+.+...+... ..+.. ..+ ..+..|+...+||+.. .++.+++..|+.++|
T Consensus 327 NlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~--~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y 402 (891)
T 3b34_A 327 NRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTVY 402 (891)
T ss_dssp TTEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHHH
T ss_pred CCCcccchhhceehHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHhhhhhhccccCCCCcc--ccccccccccccchh
Confidence 9999999999999999999999888877765321 11111 111 2355688888899854 234567888999999
Q ss_pred chhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeC----c-
Q 004076 393 RKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKE----E- 467 (775)
Q Consensus 393 ~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~g~~l~~~~~~W~~~~g~P~~~v~~~~----~- 467 (775)
.||++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++++|+|+++|+++. +
T Consensus 403 ~KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~~ 481 (891)
T 3b34_A 403 EKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHF-RRWYSQSGTPIVTVKDDYNPETEQ 481 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTTT-THHHHCCSCCEEEEEEEEETTTTE
T ss_pred hHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHH-HHHHcCCCCceEEEEEEeecCCCE
Confidence 9999999999999999999999999999999999999999999999999999984 799999999999998752 3
Q ss_pred -EEEEEEEeeccCCCCCCCeEEEEEEEEecc--ccc----------eeeeEeeccceEEEecccccccccCCCCCCceEE
Q 004076 468 -KLELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIK 534 (775)
Q Consensus 468 -~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~ 534 (775)
+++|+|+++...+......|+|||++.+.+ +.. ...+++++++.++.++.+ ... .|+.
T Consensus 482 ~~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v-------~~~--P~~~ 552 (891)
T 3b34_A 482 YTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNV-------YFQ--PVPA 552 (891)
T ss_dssp EEEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCC-------CSC--CEEE
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccC-------CCC--CcEE
Confidence 588999987644444456899999997643 211 124678888888888742 234 6999
Q ss_pred EccCceEEEEEecchhhHH
Q 004076 535 LNVNQTGFYRVKYDKDLAA 553 (775)
Q Consensus 535 ~N~~~~gyyrV~Yd~~~w~ 553 (775)
+|.+..|||||+||..+|.
T Consensus 553 l~~~~s~~~~v~~~~~~~~ 571 (891)
T 3b34_A 553 LLCEFSAPVKLEYKWSDQQ 571 (891)
T ss_dssp ESTTCCSSCEEECCCCHHH
T ss_pred EcCCCcceEEEeCCCCHHH
Confidence 9999999999999999888
No 8
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=5.3e-82 Score=727.99 Aligned_cols=445 Identities=25% Similarity=0.393 Sum_probs=382.3
Q ss_pred CCCCCCCc-eeeEEEEEEEecCCCCeEEEEEEEEEEEECC-CCEEEEEeCCceeeEeEeeeccCCCCccccCeeEE----
Q 004076 7 QPRLPKFA-VPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVE---- 80 (775)
Q Consensus 7 ~~rLp~~v-~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~v~~~~~~~~~~~~~~~~~---- 80 (775)
++..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|++|++++. ...+.
T Consensus 6 s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~---------~~~~~~~~~ 76 (608)
T 3u9w_A 6 SLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQ---------EVKYALGER 76 (608)
T ss_dssp CCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTE---------ECCEEECCC
T ss_pred cccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCE---------Ecceecccc
Confidence 45678776 7999999999999999999999999999887 489999999999999998652 11222
Q ss_pred EecCCeEEEEEeCCCcCCc-eEEEEEEEEeccCCCCcceEEEeec-cCCeeeeccccCCCCCCCCceeeccCCCCCeeEE
Q 004076 81 LVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATF 158 (775)
Q Consensus 81 ~~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~-~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f 158 (775)
.+..++.+.|.++.+|++| .++|+|.|+|+++.. |++...+. .+|..+++++|||||.+||+||||+|+|++||+|
T Consensus 77 ~~~~~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf 154 (608)
T 3u9w_A 77 QSYKGSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTY 154 (608)
T ss_dssp CGGGCEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEE
T ss_pred ccccCceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEE
Confidence 2335678999999999999 899999999987654 44444443 3577788899999999999999999999999999
Q ss_pred EEEEEECCCCeEeeCCCcccee---ecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccchHHH
Q 004076 159 KITLDVPSELVALSNMPVIDEK---VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKF 235 (775)
Q Consensus 159 ~l~i~~p~~~~~isn~~~~~~~---~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~ 235 (775)
+++|++|++++|+|||++.++. .++++++++|..++|||+||+||+||+|+..+ .|+++++|++|+..+.+++
T Consensus 155 ~i~I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~~ 230 (608)
T 3u9w_A 155 TAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSAY 230 (608)
T ss_dssp EEEEEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHHH
T ss_pred EEEeeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHHH
Confidence 9999999999999999887653 24568899999999999999999999998765 3677899999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccceeec-CCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhh
Q 004076 236 ALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 314 (775)
Q Consensus 236 ~l~~~~~~l~~~e~~~g~~yp~~k~d~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWf 314 (775)
+++.+.++|++||++|| |||++++++|++ |+|+.||||||||+++++..++.+.. +..+||||+|||||
T Consensus 231 ~~~~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWf 300 (608)
T 3u9w_A 231 EFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWT 300 (608)
T ss_dssp HTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTB
T ss_pred HHHHHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhh
Confidence 99999999999999999 999999998887 79999999999999999996554433 45789999999999
Q ss_pred cCccCcCccchhHHhhhHHHHHHHHHHhhhCCchhHHHHHHHHHH-HHhhhcccCCCCCeEeecCCcchh--hhcccchh
Q 004076 315 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEI--DEIFDAIS 391 (775)
Q Consensus 315 GnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~--~~~f~~i~ 391 (775)
||+||++||+|+|||||||+|++++++++.+|++.....+..... .....|....++|+..++.++.++ +..|+.++
T Consensus 301 GnlVT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~ 380 (608)
T 3u9w_A 301 GNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVP 380 (608)
T ss_dssp TTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHH
T ss_pred cCcCccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHH
Confidence 999999999999999999999999999999998765544444333 234457777888988777665544 45899999
Q ss_pred cchhhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHH----HHHhhcCCCcceEEEEEeC
Q 004076 392 YRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVKVKE 466 (775)
Q Consensus 392 Y~Kg~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~g~~l~~~----~~~W~~~~g~P~~~v~~~~ 466 (775)
|.||+++|+||+..|| ++.|+++||.|+++|+|++++++||++++++++|.+++.+ |++|++++|+|+|+|+++.
T Consensus 381 Y~KGa~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~ 460 (608)
T 3u9w_A 381 YEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDM 460 (608)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCC
T ss_pred HhHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeecc
Confidence 9999999999999998 7889999999999999999999999999999999999888 9999999999999998764
Q ss_pred ----cEEEEEEEee
Q 004076 467 ----EKLELEQSQF 476 (775)
Q Consensus 467 ----~~~~l~Q~rf 476 (775)
..+.++|+++
T Consensus 461 ~~~~~~~~l~q~~~ 474 (608)
T 3u9w_A 461 TLTNACIALSQRWI 474 (608)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred ccccceeeHHhHHh
Confidence 2355666543
No 9
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=6.4e-77 Score=685.26 Aligned_cols=431 Identities=19% Similarity=0.327 Sum_probs=354.0
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECC-CCEEEEEeCCceeeEeEeeeccCCCCccccCeeEEEec-
Q 004076 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE- 83 (775)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~v~~~~~~~~~~~~~~~~~~~~- 83 (775)
..+|||..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|++.+..+. .++..+..+.
T Consensus 18 ~~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~----~~~~~~~~~~~ 93 (605)
T 3cia_A 18 YTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQ----WVKVNYDLAKR 93 (605)
T ss_dssp SCCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCC----EEEECEEEEEE
T ss_pred ccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCC----ccceeEEecCc
Confidence 3479999999999999999999999999999999999876 789999999999999998310000 1123333332
Q ss_pred ---CCeEEEEEeCCCcCCceEEEEEEEEeccCCCCcceEEEeec-cCCeeeeccccCCCCCCCCceeeccCCCCCeeEEE
Q 004076 84 ---ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATFK 159 (775)
Q Consensus 84 ---~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y~-~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~ 159 (775)
.++.+.|.++ ++.++|+|.|+|.++. .|++...+. .+|..+++++|||||.+||+||||||+|++||+|+
T Consensus 94 ~~~~~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~ 167 (605)
T 3cia_A 94 DDVLGSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYT 167 (605)
T ss_dssp CSSSCEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEEE
T ss_pred cccCCCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEEE
Confidence 3567888765 2789999999998764 455443322 35667788899999999999999999999999999
Q ss_pred EEEEECCCCeEeeCCCccceeecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccchHHHHHHH
Q 004076 160 ITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (775)
Q Consensus 160 l~i~~p~~~~~isn~~~~~~~~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 239 (775)
++|++|++|+|+|||....+...++ +++|+.++|||+|++||++|+|+.++ .|+++++|++|+..+.++++++.
T Consensus 168 i~i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~----~g~~~~v~~~p~~~~~~~~~~~~ 241 (605)
T 3cia_A 168 ARITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKA----MSHQTGIYAESYILDAAVAEFDD 241 (605)
T ss_dssp EEEECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEE----SSSSEEEEECSTTHHHHHHHSTT
T ss_pred EEEEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEec----CCCeEEEEeccChHHHHHHHHHH
Confidence 9999999999998874433322333 68999999999999999999999876 36789999999998888999999
Q ss_pred HHHHHHHHHHHhCCCCCCCccceeec-CCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Q 004076 240 AVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLV 318 (775)
Q Consensus 240 ~~~~l~~~e~~~g~~yp~~k~d~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlV 318 (775)
+.+++++|+++|| |||++|+++|++ |+|+.|||||||+ +|.+..++.++. ....+||||+|||||||+|
T Consensus 242 ~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnlV 311 (605)
T 3cia_A 242 TQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNLV 311 (605)
T ss_dssp HHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTTE
T ss_pred HHHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhcccc
Confidence 9999999999999 999999999999 4999999999998 566665666543 1457999999999999999
Q ss_pred CcCccchhHHhhhHHHHHHHHHHhhhCCchhH--HHHHHHHHH-HHhhhccc-CCCCCeEeecCCcchhhhcccchhcch
Q 004076 319 TMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGL-AESHPIEVEVNHTGEIDEIFDAISYRK 394 (775)
Q Consensus 319 t~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~-~~~~pi~~~~~~~~~~~~~f~~i~Y~K 394 (775)
||+||+|+|||||||+|++++++++.+|++.. ...+....+ ..+ +.. ..++|+..++. ..+++..|+.++|.|
T Consensus 312 T~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~K 388 (605)
T 3cia_A 312 TNESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYVK 388 (605)
T ss_dssp EESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHHH
T ss_pred ccCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchhH
Confidence 99999999999999999999999999887532 111111111 222 344 56788765554 245577899999999
Q ss_pred hhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCC----CHHH-HHHHhhcCCCcceEEEEEe
Q 004076 395 GASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE----PVNK-LMNSWTKQKGYPVISVKVK 465 (775)
Q Consensus 395 g~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~g~----~l~~-~~~~W~~~~g~P~~~v~~~ 465 (775)
|++||+||+..||++.|+++|+.|+++|++++++++|||+++++++|. ++.. +|++|++++|+|+++++.+
T Consensus 389 Ga~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~ 464 (605)
T 3cia_A 389 GQLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPT 464 (605)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCC
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCC
Confidence 999999999999999999999999999999999999999999999885 5665 7999999999999887654
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=3.6e-77 Score=689.16 Aligned_cols=426 Identities=21% Similarity=0.337 Sum_probs=348.4
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECC----CCEEEEEeCCceeeEeEeeeccCCCCccccCeeEEE
Q 004076 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD----TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVEL 81 (775)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~----~~~i~L~~~~l~i~~v~v~~~~~~~~~~~~~~~~~~ 81 (775)
..+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|++|++++. +..+..
T Consensus 20 ~~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~---------~~~~~~ 90 (632)
T 2xq0_A 20 STLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGS---------KADFQI 90 (632)
T ss_dssp TCCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTE---------ECCEEE
T ss_pred ccccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCe---------ecceEE
Confidence 3479999999999999999999999999999999999877 799999999999999998531 223333
Q ss_pred ec----CCeEEEEEeCCCcCCceEEEEEEEEeccCCCCcceEEEee-ccCCeeeeccccCCCCCCCCceeeccCCCCCee
Q 004076 82 VE----ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKA 156 (775)
Q Consensus 82 ~~----~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y-~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka 156 (775)
+. .++.|.|.++++ .+.++|+|.|+|.++.. |++.... ..+|. +++++|||||.+||+||||||+|++||
T Consensus 91 ~~~~~~~~~~l~I~l~~~--g~~~~l~I~Y~g~~~~~--gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~Ka 165 (632)
T 2xq0_A 91 EQRKEPLGSRLVINNASC--NDNFTLNIQFRTTDKCT--ALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVKS 165 (632)
T ss_dssp CCCBTTTBCCEEEECCCS--SSEEEEEEEEEECTTCS--SEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCCE
T ss_pred cccccccCcEEEEEecCC--CCEEEEEEEEeeecCcC--cceeecccccCCC-ceEEEeccccCCcceeeeecCCcccce
Confidence 32 356889998776 33899999999998653 4433222 22455 788899999999999999999999999
Q ss_pred EEEEEEEECCCCeEeeCCCccceeecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccchHHHH
Q 004076 157 TFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFA 236 (775)
Q Consensus 157 ~f~l~i~~p~~~~~isn~~~~~~~~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~ 236 (775)
+|+++|++| ++|++||........++ .+++|+.++|||+|++||++|+|...+. |+++++|++|+..+.++++
T Consensus 166 tf~i~I~~p--~~vv~sg~~~~~~~~~~-~~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~~~ 238 (632)
T 2xq0_A 166 TFTASIESP--LPVVFSGIRIEDTSKDT-NIYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQWE 238 (632)
T ss_dssp EEEEEEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHHHH
T ss_pred EEEEEEEEc--hHHhccCccccceecCC-CeEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHHHH
Confidence 999999999 98886664433222122 2789999999999999999999998762 5679999999988888899
Q ss_pred HH-HHHHHHHHHHHHhCCCCCCCccceeec-CCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhh
Q 004076 237 LN-VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 314 (775)
Q Consensus 237 l~-~~~~~l~~~e~~~g~~yp~~k~d~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWf 314 (775)
++ .+.+++++|+++|| |||++|+|+|++ |+|+.||||||||+ |.+..++.++. ....+||||+|||||
T Consensus 239 ~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~~--------~~~~viaHElAHqWf 308 (632)
T 2xq0_A 239 FENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHDR--------SNIDVIAHELAHSWS 308 (632)
T ss_dssp HTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSSS--------CSTHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCch--------hHHHHHHHHHHHHHh
Confidence 98 99999999999999 999999999999 59999999999985 55544665543 146799999999999
Q ss_pred cCccCcCccchhHHhhhHHHHHHHHHHhhhCCchhH--HHHHHHHHH-HHhhhcccCCCCC---eEeecCCcchhhhccc
Q 004076 315 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGLAESHP---IEVEVNHTGEIDEIFD 388 (775)
Q Consensus 315 GnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~~~~~p---i~~~~~~~~~~~~~f~ 388 (775)
||+||++||+|+|||||||+|++++++++.+|++.. ...+....+ .++ ++...++| +..++.++.+++..|+
T Consensus 309 GnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~pl~~l~~~~~~~~~~~~~f~ 386 (632)
T 2xq0_A 309 GNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSI--DSMKDPERFSTLVQNLNDNTDPDDAFS 386 (632)
T ss_dssp TTTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HTCSSHHHHTSSSCCCCSSSCGGGGCS
T ss_pred cCCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HhcccCCCCcccccCCCCCCChHHhcc
Confidence 999999999999999999999999999999988642 211111112 222 44455677 4334433455677899
Q ss_pred chhcchhhHHHHHHHHhhCH-HHHHHHHHHHHHHhccCCCCHHHHHHHHHhccC---CCHHH-HHHHhhcCCCcceEEEE
Q 004076 389 AISYRKGASVIRMLQNYLGA-ECFQRSLASYIKKYACSNAKTEDLWAALEEGSG---EPVNK-LMNSWTKQKGYPVISVK 463 (775)
Q Consensus 389 ~i~Y~Kg~~vl~mL~~~lG~-~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~g---~~l~~-~~~~W~~~~g~P~~~v~ 463 (775)
.++|.||++||+||+..||+ +.|+++|+.|+++|+|++++++|||+++++++| .+++. +|++|++++|+|+ .++
T Consensus 387 ~i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~ 465 (632)
T 2xq0_A 387 TVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPH 465 (632)
T ss_dssp SHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCC
T ss_pred chhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcC
Confidence 99999999999999999999 999999999999999999999999999999987 46776 7999999999999 665
Q ss_pred Ee
Q 004076 464 VK 465 (775)
Q Consensus 464 ~~ 465 (775)
.+
T Consensus 466 ~~ 467 (632)
T 2xq0_A 466 FI 467 (632)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 11
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=479.56 Aligned_cols=299 Identities=22% Similarity=0.411 Sum_probs=261.1
Q ss_pred CcceEEEEEeCcEEEEEEEeeccCCCC---CCCeEEEEEEEEeccccceeeeEeeccceEEEecccccccccCCCCCCce
Q 004076 456 GYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 532 (775)
Q Consensus 456 g~P~~~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 532 (775)
|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+||+.++.++.++ .++ +|
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~---------~~~--~w 69 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILP---------EEV--EW 69 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECS---------SCC--SC
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcC---------CCC--ce
Confidence 899999999889999999999986542 2358999999998765555567887776666653 245 89
Q ss_pred EEEccCceEEEEEecchhhHH-----------------------------------------------------------
Q 004076 533 IKLNVNQTGFYRVKYDKDLAA----------------------------------------------------------- 553 (775)
Q Consensus 533 i~~N~~~~gyyrV~Yd~~~w~----------------------------------------------------------- 553 (775)
|++|.+++||||||||+++|.
T Consensus 70 i~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~ 149 (419)
T 3rjo_A 70 IKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGL 149 (419)
T ss_dssp EEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHH
T ss_pred EEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 999999999999999999998
Q ss_pred -------------------------------------------HHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhcC
Q 004076 554 -------------------------------------------SHLDALLRGEIFTALALLGHKETLNEASKRFHAFLAD 590 (775)
Q Consensus 554 -------------------------------------------~~~~~~~R~~ll~~ac~~g~~~ci~~a~~~f~~~~~~ 590 (775)
++.+.++|..++++||.+|+++|+++|.++|++|+.+
T Consensus 150 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw~~~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~~~ 229 (419)
T 3rjo_A 150 NELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTDEGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKES 229 (419)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCSSCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhC
Confidence 2344679999999999999999999999999999987
Q ss_pred CCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCcHHHHHHHHHHhccCc-ccccce
Q 004076 591 RTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE-VRSQDA 669 (775)
Q Consensus 591 ~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~~~-ir~qd~ 669 (775)
+....||||+|. .+||.|+++ +++|++||++|+++++++||..++.||||++||++|+++|++++++. ||+||.
T Consensus 230 ~~~~~i~~dlr~---~Vy~~~~~~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~qD~ 304 (419)
T 3rjo_A 230 NGNLSLPVDVTL---AVFAVGAQS--TEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQEF 304 (419)
T ss_dssp TTCSCCCGGGHH---HHHHHHTTS--HHHHHHHHHHHHHCCCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGGGH
T ss_pred CCCCCCCCCcce---eEEeeeeCC--HHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchhHH
Confidence 544479999999 555666665 88999999999999999999999999999999999999999999875 799999
Q ss_pred eeeee-Eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhhccCCCHHHHHHHHHHhhcCCCch-HHHHHHHHH
Q 004076 670 VYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKPY-IARTLRQSI 744 (775)
Q Consensus 670 ~~~~~-v~~~--g~~~~w~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~Ff~~~~~~~-~~~~~~~~l 744 (775)
..++. |+.| |+.++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+.++..+ ..++++|++
T Consensus 305 ~~~~~~v~~n~~g~~~aw~fl~~nw~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~l~e~~~Ff~~~~~~~~~~~~~~qal 384 (419)
T 3rjo_A 305 PQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQLRCVQQTI 384 (419)
T ss_dssp HHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHTTTTC-CCCHHHHHHH
T ss_pred HHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhCcCchhHHHHHHHHhhcCCCHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 99999 8877 99999999999999999999855 6799999999999999999999999999987655 689999999
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHhhhc
Q 004076 745 ERVQINAKWVESIRNEGHLAEAVKELAY 772 (775)
Q Consensus 745 e~i~~ni~W~~~~~~~~~i~~wl~~~~~ 772 (775)
|+|+.|++|++++.+. |.+||+++.+
T Consensus 385 e~i~~ni~W~~~~~~~--v~~wL~~~~~ 410 (419)
T 3rjo_A 385 ETIEENIGWMDKNFDK--IRVWLQSEKL 410 (419)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHhhH
Confidence 9999999999999988 9999988753
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.96 E-value=3.4e-28 Score=276.34 Aligned_cols=297 Identities=14% Similarity=0.144 Sum_probs=202.7
Q ss_pred CeeEEEEEEEECCC---CeEeeCCCccceeecCceEEE---EEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeC
Q 004076 154 CKATFKITLDVPSE---LVALSNMPVIDEKVDGNMKTV---SYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQV 227 (775)
Q Consensus 154 ~ka~f~l~i~~p~~---~~~isn~~~~~~~~~~~~~~~---~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~ 227 (775)
...+++++|..|++ |.+.+.++..+.... +..++ .|..-.--| +.+|+|...+. ...|+++++...+
T Consensus 119 ~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~~-~~~~f~a~~yd~LvDsP-----v~~G~~~~~~~-~~~g~p~~l~v~~ 191 (597)
T 4fgm_A 119 TDLPCELHLHAPPEAPLWKVATGMPRKSGQPH-SWGCFRADNYDALIDYP-----FLIGDLTIEEF-IAHGIKHSLVLSG 191 (597)
T ss_dssp TTSCEEEEECCCTTCTTCEEEESSCBCSSCTT-SSEEEEESSHHHHTTCC-----EEEESCEEEEE-EETTEEEEEEEES
T ss_pred cCCcEEEEEECCCCCCcceEEecCCccCCCCC-cceEEEcCCHHHHhcch-----hcccCcEEEEe-ccCCeEEEEEEEc
Confidence 34678999999999 999888876543211 22222 222211111 35789887663 4568888875554
Q ss_pred CccchHHHHHHHHHHHHHHHHHHhCCCCCCCccceeec-CCCCCccccccccc--eeecccccccCCCCcHHHHHHHHHH
Q 004076 228 GKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLV--TYRETALLYDDQHSAAANKQRVATV 304 (775)
Q Consensus 228 ~~~~~~~~~l~~~~~~l~~~e~~~g~~yp~~k~d~v~~-p~~~~g~mE~~gli--~~~e~~ll~~~~~~~~~~~~~~~~~ 304 (775)
......+..+..+++++++++++|| +||++++++++. ++...|||||.+.. ++++..+.......+.........+
T Consensus 192 ~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~l 270 (597)
T 4fgm_A 192 RHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSL 270 (597)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhh
Confidence 4334567888899999999999999 999999999864 45588999998864 3565533322221233455677899
Q ss_pred HHHHHHHHhhcCccCc-----------CccchhHHhhhHHHHHHHHHHhhhC--CchhHHHHHHHHHHHHhhhcccCCCC
Q 004076 305 VAHELAHQWFGNLVTM-----------EWWTHLWLNEGFATWVSYLAADSLF--PEWKIWTQFLDECTEGLRLDGLAESH 371 (775)
Q Consensus 305 iaHElaHqWfGnlVt~-----------~~w~d~WL~EGfA~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~ 371 (775)
++||++|||||+.|+| .||+++||+||||+|++.++..+.- ....+. ..+......+........+
T Consensus 271 iaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~-~~l~~~i~~~~~~~gr~~~ 349 (597)
T 4fgm_A 271 CCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYL-KLLGDTLSRVERGAGQYQQ 349 (597)
T ss_dssp HHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHH-HHHHHHHHHHHHSGGGGTC
T ss_pred HhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHH-HHHHHHHHHhhcCCCcccc
Confidence 9999999999988875 4569999999999999998876542 221111 1122222222222222223
Q ss_pred CeEee-------cCCcchhhhcccchhcchhhHHHHHHHHhhCH-----HHHHHHHHHHHHHhcc--CCCCHHHHHHHHH
Q 004076 372 PIEVE-------VNHTGEIDEIFDAISYRKGASVIRMLQNYLGA-----ECFQRSLASYIKKYAC--SNAKTEDLWAALE 437 (775)
Q Consensus 372 pi~~~-------~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-----~~F~~~l~~yl~~~~~--~~~~~~df~~~l~ 437 (775)
|+... ...+++.........|.||+++++||+..|++ +.|+++||.|+++|.+ ++++++||.++++
T Consensus 350 sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~e 429 (597)
T 4fgm_A 350 SVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWLN 429 (597)
T ss_dssp CHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHHH
T ss_pred ChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHHH
Confidence 33211 01111111112234799999999999888865 4799999999999874 6899999999999
Q ss_pred hccCCCHHHHHHHhhcCCCcce
Q 004076 438 EGSGEPVNKLMNSWTKQKGYPV 459 (775)
Q Consensus 438 ~~~g~~l~~~~~~W~~~~g~P~ 459 (775)
+++|.|+.+||++|+++++.|.
T Consensus 430 ~~sG~dl~~ff~~~l~~t~~~p 451 (597)
T 4fgm_A 430 QYPGIDISDFLKDALYNKESLS 451 (597)
T ss_dssp TSTTCCCHHHHHHHHHSCSCCC
T ss_pred HhcCcCHHHHHHHHHhCCCCcc
Confidence 9999999999999999998753
No 13
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=79.62 E-value=3.9 Score=41.38 Aligned_cols=103 Identities=23% Similarity=0.314 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCc--cceeecCCCCC-c---cccccccceeecccccccCCCCc-HHHHHHHHHHHH
Q 004076 234 KFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAA-G---AMENYGLVTYRETALLYDDQHSA-AANKQRVATVVA 306 (775)
Q Consensus 234 ~~~l~~~~~~l~~~e~~~g~~yp~~k--~d~v~~p~~~~-g---~mE~~gli~~~e~~ll~~~~~~~-~~~~~~~~~~ia 306 (775)
-.|...+.++.+||.+.|| .-++.. +.++..=.+.. + ..+| .++..+.+.|...... ......-..+++
T Consensus 68 vdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~N---AfWdg~~m~fGdGdg~~f~~~~~~lDVv~ 143 (301)
T 1bqb_A 68 VDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNN---AAWIGDKMIYGDGDGRTFTNLSGANDVVA 143 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTC---EEECSSSEEECCCCSSSBSCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccC---cEEcCCEEEEEcCCCcccCCcccccceee
Confidence 3566678899999999999 556643 33333211111 1 1222 1222222333221100 000001246899
Q ss_pred HHHHHHhhcCccCcCccch-hHHhhhHHHHHHHHH
Q 004076 307 HELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYLA 340 (775)
Q Consensus 307 HElaHqWfGnlVt~~~w~d-~WL~EGfA~y~~~~~ 340 (775)
||++|--.-....+..-.+ -=|||||+..+...+
T Consensus 144 HE~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 144 HEITHGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred eecccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 9999987765544443333 348999999999753
No 14
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=78.68 E-value=58 Score=32.78 Aligned_cols=98 Identities=17% Similarity=0.253 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccceeecCCCCCccccc--c--ccceeecccccccCCCCcHHHHHHHHHHHHHH
Q 004076 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN--Y--GLVTYRETALLYDDQHSAAANKQRVATVVAHE 308 (775)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~--~--gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 308 (775)
+..|.-.+.++.+||.++|| .-++.. .++..-.+. ...+| | ..++|.+..-.+.+. .-..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id~-~l~~~Vhyg-~~y~NAfWdG~~M~fGDG~~~~~p~--------~~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLTH-KLYMKVHYG-RSVENAYWDGTAMLFGDGATMFYPL--------VSLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSSS-CEEEEESCT-TTCCCEEECSSCEEECCCCSSBSCS--------CCHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCCC-ceEEEEecC-CCccCcEecCcEEEeeCCCcccccc--------cccceeeec
Confidence 34455577899999999999 556652 333332221 12222 2 123343321111111 125799999
Q ss_pred HHHHhhcCccCcCccchh-HHhhhHHHHHHHHHH
Q 004076 309 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (775)
Q Consensus 309 laHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~~ 341 (775)
++|--.-....+....+. =|||||+..+...+-
T Consensus 142 ~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 142 VSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeccccCccccCCccchhHHHHHHHHHHHH
Confidence 999988776665544444 489999999986643
No 15
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.89 E-value=3 Score=35.22 Aligned_cols=70 Identities=21% Similarity=0.264 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccceeecCCCCCccccc---cccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhc
Q 004076 239 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN---YGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315 (775)
Q Consensus 239 ~~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~---~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 315 (775)
...++++-+.+..|++. +++-++-.+.....++.. -+.|.+... ++-. -+...++.++|||++|-=-+
T Consensus 27 ~L~~~~~~l~~~~~~~~--~~v~v~~~~~~NAf~~g~~~~~~~i~v~~g-Ll~~------l~~~El~aVlaHElgH~~~~ 97 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--PTVAIYDSADINAFATGAKRDDSLVAVSTG-LLHN------MTRDEAEAVLAHEVSHIANG 97 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--CEEEEECCSSEEEEEECCC--CCEEEEEHH-HHHH------SCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCC--CeEEEEECCCcCEEEEecCCCCCEEEEcHH-HHhh------CCHHHHHHHHHHHHHHHHCC
Confidence 34556666667777653 444333222211112211 133555543 2211 02346889999999997655
Q ss_pred Cc
Q 004076 316 NL 317 (775)
Q Consensus 316 nl 317 (775)
+.
T Consensus 98 h~ 99 (107)
T 3cqb_A 98 DM 99 (107)
T ss_dssp CE
T ss_pred CH
Confidence 43
No 16
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=72.87 E-value=1.4 Score=50.55 Aligned_cols=39 Identities=21% Similarity=0.425 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhhcCccCcCccc---------hhHHhhhHHHHHHHH
Q 004076 301 VATVVAHELAHQWFGNLVTMEWWT---------HLWLNEGFATWVSYL 339 (775)
Q Consensus 301 ~~~~iaHElaHqWfGnlVt~~~w~---------d~WL~EGfA~y~~~~ 339 (775)
+.+++.||++|.-=|-..-+..|. -.|+.||||+||+..
T Consensus 422 Lee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 422 LEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp HHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred ecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 345789999999855333333333 579999999999754
No 17
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=72.27 E-value=5.4 Score=40.52 Aligned_cols=102 Identities=19% Similarity=0.118 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCc--cceeecCCCC---Cccccccccceeeccc-ccccCCCCcHHHHHHHHHHH
Q 004076 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFA---AGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (775)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~~g~~yp~~k--~d~v~~p~~~---~g~mE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 305 (775)
.+..|...+.++.+||.+.|| .-++.. +.++..=.+. ..|.=+...++|.+-. ..+.+- .....++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPL-------SGGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCG-------GGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCcccccc-------cccccce
Confidence 345677788999999999999 556642 3333221221 1222223344444321 111111 0124799
Q ss_pred HHHHHHHhhcCccCcCccch-hHHhhhHHHHHHHHHH
Q 004076 306 AHELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYLAA 341 (775)
Q Consensus 306 aHElaHqWfGnlVt~~~w~d-~WL~EGfA~y~~~~~~ 341 (775)
+||++|--.........-.+ -=|||+|+..+...+-
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 99999987655444333333 3489999999986654
No 18
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=69.22 E-value=29 Score=34.95 Aligned_cols=107 Identities=24% Similarity=0.282 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCc--cceeec---C-CCCCccccccccceeeccc-ccccCCCCcHHHHHHHHHH
Q 004076 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAI---P-DFAAGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATV 304 (775)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~~g~~yp~~k--~d~v~~---p-~~~~g~mE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~ 304 (775)
.+..|...+.++.+||.+.|| .-++.. +.++.. . .+ ..|.=+...++|.+-. ..+.+- .....+
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y-~NAfW~g~~m~fGDGdg~~f~~~-------~~slDV 132 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRY-NNAFWNGSQMTYGDGDGSTFIAF-------SGDPDV 132 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSC-CCEEECSSCEEEECCCSSSBCCG-------GGSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCc-cCceecCCEEEEeCCCCcccccc-------ccccch
Confidence 345667788999999999999 556642 333321 1 11 1232223344554421 111111 012469
Q ss_pred HHHHHHHHhhcCccCcCccch-hHHhhhHHHHHHHHHHhhhCCchhH
Q 004076 305 VAHELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYLAADSLFPEWKI 350 (775)
Q Consensus 305 iaHElaHqWfGnlVt~~~w~d-~WL~EGfA~y~~~~~~~~~~~~~~~ 350 (775)
++|||+|--.........-.+ -=|||+|+..+...+- .++|.+
T Consensus 133 vaHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve---~~dWli 176 (304)
T 4ger_A 133 VGHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ---RKNWLV 176 (304)
T ss_dssp HHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH---CSSSEE
T ss_pred hhhccccccccccCCccccCCccchhHHHHHHHHHHhc---cCCcee
Confidence 999999977665444333222 2489999999997764 345543
No 19
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=67.36 E-value=8.1 Score=39.76 Aligned_cols=100 Identities=17% Similarity=0.220 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCc--cceeecCCCCCccccc--c--ccceeeccc-ccccCCCCcHHHHHHHHHHH
Q 004076 233 GKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMEN--Y--GLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (775)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~~g~~yp~~k--~d~v~~p~~~~g~mE~--~--gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 305 (775)
+..+...+.++.+||.+.||. -++.. ..++..=.+. ...+| | ..++|.+.. ..+.... .-..++
T Consensus 90 v~~ay~~~~~t~d~y~~~~gr-nsid~~G~~l~~~VHyg-~~y~NAfWdG~~M~fGDG~g~~f~~~~-------~~lDVv 160 (341)
T 2vqx_A 90 VDEAYDYLGVTYDFFWQAFKR-NSLDNQGLPLTGSVHYG-KEYQNAFWNGQQMVFGDGDGEIFNRFT-------IAIDVV 160 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-CSTTSSCCCEEEEESCS-SSCCCEEECSSCEEECCCCSSSBCCTT-------SCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCCCCCCCeeEEEEecC-CCccCceecCcEeEeeCCCCcccCCcc-------cchhhh
Confidence 455666788999999999994 35542 3333321121 11222 2 123333221 0111100 124699
Q ss_pred HHHHHHHhhcCccCcCccchh-HHhhhHHHHHHHHHH
Q 004076 306 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (775)
Q Consensus 306 aHElaHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~~ 341 (775)
+||++|--......+..-.+- =|||||+.+|...+-
T Consensus 161 ~HEltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve 197 (341)
T 2vqx_A 161 GHALAHGVTESEAGLIYFQQAGALNESLSDVFGSLVK 197 (341)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceecccCCccccCCCcchhhHHHHHHHHHHH
Confidence 999999877655444433333 499999999987654
No 20
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=64.43 E-value=64 Score=32.48 Aligned_cols=99 Identities=15% Similarity=0.152 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccceeecCCCC---CccccccccceeecccccccCCCCcHHHHHHHHHHHHHHH
Q 004076 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFA---AGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 309 (775)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~---~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 309 (775)
+..|.-.+.++.+||.++|| .-|+. ..++..-.+. ..|.=+...++|.+..-.+.+- . -..+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~-~-------slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL-V-------SLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS-C-------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc-c-------ccchhhhhh
Confidence 44555577889999999999 55664 2333221111 1222223344554432111111 1 246899999
Q ss_pred HHHhhcCccCcCcc-chhHHhhhHHHHHHHHHH
Q 004076 310 AHQWFGNLVTMEWW-THLWLNEGFATWVSYLAA 341 (775)
Q Consensus 310 aHqWfGnlVt~~~w-~d~WL~EGfA~y~~~~~~ 341 (775)
+|--......+..- .--=|||||+..+...+-
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 99877654333322 224589999999986543
No 21
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=58.57 E-value=1e+02 Score=28.23 Aligned_cols=91 Identities=21% Similarity=0.217 Sum_probs=65.2
Q ss_pred HHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHH
Q 004076 557 DALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEK 636 (775)
Q Consensus 557 ~~~~R~~ll~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek 636 (775)
+...|...+..++..+.++.+....+. +.++ ++..|..+..+++. .|+.+..+.|.+... ..++..|
T Consensus 27 ~~~vr~~A~~~L~~~~~~~~~~~L~~~----l~~~-----~~~vr~~a~~~L~~---~~~~~~~~~L~~~l~-d~~~~vr 93 (201)
T 3ltj_A 27 SYYVRRAAAYALGKIGDERAVEPLIKA----LKDE-----DAWVRRAAADALGQ---IGDERAVEPLIKALK-DEDGWVR 93 (201)
T ss_dssp CHHHHHHHHHHHHHHCCGGGHHHHHHH----TTCS-----SHHHHHHHHHHHHH---HCCGGGHHHHHHHTT-CSSHHHH
T ss_pred CHHHHHHHHHHHHhcCChhHHHHHHHH----HcCC-----CHHHHHHHHHHHHh---hCCHHHHHHHHHHHc-CCCHHHH
Confidence 467888999999999987666554433 3331 46778755444433 567777888887664 5688899
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHhc
Q 004076 637 TRILSSLASCPDVNIVLEVLNFLL 660 (775)
Q Consensus 637 ~~ll~aL~~~~d~~~l~~~L~~~l 660 (775)
...+.+|+...++..+..++...-
T Consensus 94 ~~a~~aL~~~~~~~~~~~L~~~l~ 117 (201)
T 3ltj_A 94 QSAAVALGQIGDERAVEPLIKALK 117 (201)
T ss_dssp HHHHHHHHHHCCGGGHHHHHHHTT
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHc
Confidence 999999998888877777777543
No 22
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=41.73 E-value=23 Score=33.82 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHh
Q 004076 300 RVATVVAHELAHQW 313 (775)
Q Consensus 300 ~~~~~iaHElaHqW 313 (775)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 35789999999986
No 23
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=36.75 E-value=40 Score=31.78 Aligned_cols=13 Identities=54% Similarity=0.808 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHh
Q 004076 301 VATVVAHELAHQW 313 (775)
Q Consensus 301 ~~~~iaHElaHqW 313 (775)
.+.++||||+|+.
T Consensus 135 ~a~~~AHElGH~l 147 (202)
T 1yp1_A 135 MAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 24
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=36.17 E-value=41 Score=33.04 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHhhcCc
Q 004076 298 KQRVATVVAHELAHQWFGNL 317 (775)
Q Consensus 298 ~~~~~~~iaHElaHqWfGnl 317 (775)
...++.+||||++|-=-++.
T Consensus 97 ~~ELaaVLaHElgH~~~~H~ 116 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARHG 116 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHCcCH
Confidence 34689999999999765543
No 25
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=35.99 E-value=45 Score=31.23 Aligned_cols=13 Identities=54% Similarity=0.774 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHh
Q 004076 301 VATVVAHELAHQW 313 (775)
Q Consensus 301 ~~~~iaHElaHqW 313 (775)
.+.++||||+|++
T Consensus 133 ~a~~~AHElGH~l 145 (197)
T 1bud_A 133 VAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhc
Confidence 6789999999996
No 26
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=35.09 E-value=49 Score=31.12 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHh
Q 004076 300 RVATVVAHELAHQW 313 (775)
Q Consensus 300 ~~~~~iaHElaHqW 313 (775)
..+.++||||+|..
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36789999999995
No 27
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=33.59 E-value=2.2e+02 Score=24.17 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=19.4
Q ss_pred EEEEEeCCCcCCceEEEEEEEEeccC
Q 004076 87 ILVLEFAETLPTGMGVLAIGFEGVLN 112 (775)
Q Consensus 87 ~l~i~l~~~l~~g~~~l~i~y~g~~~ 112 (775)
...+.++.++.||.|+|+..+.|+..
T Consensus 81 ~f~~~w~~~~~pG~Ytl~a~l~~~~~ 106 (120)
T 3isy_A 81 DFSDVWKEVPEPGTYEVKVTFKGRAE 106 (120)
T ss_dssp EEEEEESSCCCSEEEEEEEEECCEET
T ss_pred EEEEEeCCCCCCccEEEEEEEEeeec
Confidence 34556666788899999999988753
No 28
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=33.26 E-value=92 Score=28.53 Aligned_cols=91 Identities=23% Similarity=0.216 Sum_probs=63.8
Q ss_pred HHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHH
Q 004076 557 DALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEK 636 (775)
Q Consensus 557 ~~~~R~~ll~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek 636 (775)
+...|..++..++..|.+.++....+ .+.+ -++..|..+..+++. .|+.+..+.|.+.. ...++..|
T Consensus 58 ~~~vr~~a~~~L~~~~~~~~~~~L~~----~l~d-----~~~~vr~~a~~aL~~---~~~~~~~~~L~~~l-~d~~~~vr 124 (201)
T 3ltj_A 58 DAWVRRAAADALGQIGDERAVEPLIK----ALKD-----EDGWVRQSAAVALGQ---IGDERAVEPLIKAL-KDEDWFVR 124 (201)
T ss_dssp SHHHHHHHHHHHHHHCCGGGHHHHHH----HTTC-----SSHHHHHHHHHHHHH---HCCGGGHHHHHHHT-TCSSHHHH
T ss_pred CHHHHHHHHHHHHhhCCHHHHHHHHH----HHcC-----CCHHHHHHHHHHHHH---hCcHHHHHHHHHHH-cCCCHHHH
Confidence 35678888888999998766655443 4444 147788755444433 56777788887765 56688899
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHhc
Q 004076 637 TRILSSLASCPDVNIVLEVLNFLL 660 (775)
Q Consensus 637 ~~ll~aL~~~~d~~~l~~~L~~~l 660 (775)
...+.+|+...++..+..++..+-
T Consensus 125 ~~a~~aL~~~~~~~~~~~L~~~l~ 148 (201)
T 3ltj_A 125 IAAAFALGEIGDERAVEPLIKALK 148 (201)
T ss_dssp HHHHHHHHHHTCGGGHHHHHHHTT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHc
Confidence 999999998888777776666543
No 29
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=31.98 E-value=54 Score=34.98 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHh
Q 004076 300 RVATVVAHELAHQW 313 (775)
Q Consensus 300 ~~~~~iaHElaHqW 313 (775)
..+.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999997
No 30
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=31.11 E-value=74 Score=29.49 Aligned_cols=165 Identities=16% Similarity=0.164 Sum_probs=96.3
Q ss_pred HHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHH
Q 004076 557 DALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEK 636 (775)
Q Consensus 557 ~~~~R~~ll~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek 636 (775)
+...|...+..++..|.+.++....+ .+.++ ++..|..+..++.. .|+.+..+.|.+.. ...++.-|
T Consensus 32 ~~~vR~~A~~~L~~~~~~~~~~~L~~----~l~~~-----~~~vr~~a~~aL~~---~~~~~~~~~L~~~l-~~~~~~vr 98 (211)
T 3ltm_A 32 SYYVRRAAAYALGKIGDERAVEPLIK----ALKDE-----DAWVRRAAADALGQ---IGDERAVEPLIKAL-KDEDGWVR 98 (211)
T ss_dssp SHHHHHHHHHHHHHHCCGGGHHHHHH----HTTCS-----CHHHHHHHHHHHHH---HCCGGGHHHHHHHT-TCSSHHHH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHH----HHcCC-----CHHHHHHHHHHHHh---hCCHHHHHHHHHHH-cCCCHHHH
Confidence 45788889999999998766655443 33331 47788755444433 56677778887765 55678889
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHhccC--cccccceeeeee-Eccc-cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHh
Q 004076 637 TRILSSLASCPDVNIVLEVLNFLLSS--EVRSQDAVYGLA-VSIE-GRETAWKWLKDNWDHISKTWGSG-FLITRFISSI 711 (775)
Q Consensus 637 ~~ll~aL~~~~d~~~l~~~L~~~l~~--~ir~qd~~~~~~-v~~~-g~~~~w~fl~~n~~~i~~~~~~~-~~l~~~i~~~ 711 (775)
...+.+|+...++..+..++...-++ .||..= ...+. +... .... +.+..... ..+....-..
T Consensus 99 ~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr~~a-~~aL~~~~~~~~~~~-----------L~~~l~d~~~~vr~~a~~a 166 (211)
T 3ltm_A 99 QSAAVALGQIGDERAVEPLIKALKDEDWFVRIAA-AFALGEIGDERAVEP-----------LIKALKDEDGWVRQSAADA 166 (211)
T ss_dssp HHHHHHHHHHCCGGGHHHHHHHTTCSSHHHHHHH-HHHHHHHCCGGGHHH-----------HHHHTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHhCCCHHHHHHH-HHHHHHcCCHHHHHH-----------HHHHHcCCCHHHHHHHHHH
Confidence 99999999888888787777755433 243211 11222 2211 2222 33333322 2223222233
Q ss_pred hccCCCHHHHHHHHHHhhcCCCchHHHHHHHHHHHH
Q 004076 712 VSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERV 747 (775)
Q Consensus 712 ~~~~~t~~~~~~~~~Ff~~~~~~~~~~~~~~~le~i 747 (775)
...+...+-+..+.+..++.. +..+....++|..+
T Consensus 167 L~~~~~~~~~~~L~~~l~d~~-~~vr~~A~~aL~~~ 201 (211)
T 3ltm_A 167 LGEIGGERVRAAMEKLAETGT-GFARKVAVNYLETH 201 (211)
T ss_dssp HHHHCSHHHHHHHHHHHHHCC-HHHHHHHHHHHHC-
T ss_pred HHHhCchhHHHHHHHHHhCCC-HHHHHHHHHHHHhc
Confidence 345567777888888776532 34445555555444
No 31
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=29.97 E-value=1.5e+02 Score=27.23 Aligned_cols=89 Identities=21% Similarity=0.202 Sum_probs=46.6
Q ss_pred HHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHHH
Q 004076 558 ALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKT 637 (775)
Q Consensus 558 ~~~R~~ll~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~ 637 (775)
...|..++..++..+.+.++....+ .+.+ -++..|..+..+++ +.|+.+..+.|.+.. ...++..|.
T Consensus 64 ~~vr~~a~~aL~~~~~~~~~~~L~~----~l~~-----~~~~vr~~a~~aL~---~~~~~~~~~~L~~~l-~d~~~~vr~ 130 (211)
T 3ltm_A 64 AWVRRAAADALGQIGDERAVEPLIK----ALKD-----EDGWVRQSAAVALG---QIGDERAVEPLIKAL-KDEDWFVRI 130 (211)
T ss_dssp HHHHHHHHHHHHHHCCGGGHHHHHH----HTTC-----SSHHHHHHHHHHHH---HHCCGGGHHHHHHHT-TCSSHHHHH
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHH----HHcC-----CCHHHHHHHHHHHH---HhCcHHHHHHHHHHH-hCCCHHHHH
Confidence 4566666666666666554443332 2332 13455653333332 234555555555533 445666666
Q ss_pred HHHHHhcCCCcHHHHHHHHHHh
Q 004076 638 RILSSLASCPDVNIVLEVLNFL 659 (775)
Q Consensus 638 ~ll~aL~~~~d~~~l~~~L~~~ 659 (775)
..+.+|+...++..+..++...
T Consensus 131 ~a~~aL~~~~~~~~~~~L~~~l 152 (211)
T 3ltm_A 131 AAAFALGEIGDERAVEPLIKAL 152 (211)
T ss_dssp HHHHHHHHHCCGGGHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 6666666666665555555543
No 32
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=28.76 E-value=42 Score=31.64 Aligned_cols=13 Identities=38% Similarity=0.672 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHh
Q 004076 301 VATVVAHELAHQW 313 (775)
Q Consensus 301 ~~~~iaHElaHqW 313 (775)
.+.++||||+|++
T Consensus 136 ~a~~~AHElGHnl 148 (202)
T 1atl_A 136 MGVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred eEEEehhhhcccc
Confidence 6789999999995
No 33
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=28.46 E-value=43 Score=31.38 Aligned_cols=13 Identities=46% Similarity=0.721 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHh
Q 004076 301 VATVVAHELAHQW 313 (775)
Q Consensus 301 ~~~~iaHElaHqW 313 (775)
.+.++||||+|++
T Consensus 135 ~a~~~AHElGH~l 147 (197)
T 1qua_A 135 MAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 34
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=27.27 E-value=2.1e+02 Score=31.56 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=33.1
Q ss_pred hCHHHHHHHHHHHHHH------hccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCcce
Q 004076 406 LGAECFQRSLASYIKK------YACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPV 459 (775)
Q Consensus 406 lG~~~F~~~l~~yl~~------~~~~~~~~~df~~~l~~~~g~~l~~~~~~W~~~~g~P~ 459 (775)
+.++.-..-+.+|+.. |+.+.....++.+..++..|.|++.|-+.-+.....|+
T Consensus 495 ~~~~~a~~ev~Ry~~~Pgqa~sY~~G~~~i~~lR~~a~~~lGfdlk~FHd~vL~~G~~Pl 554 (562)
T 3iuk_A 495 ISEGQLQFEFTRYLGWPGQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGSVGL 554 (562)
T ss_dssp CCHHHHHHHHHHHHHSTTSTTHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCSCCH
T ss_pred CChHHHHHHHHHHHcCCcHHhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCH
Confidence 3455555667777642 22222234566666677778889888777776666664
No 35
>2nxp_A Transcription initiation factor TFIID subunit 5; transcription factor, TAF5; 2.17A {Homo sapiens} SCOP: d.379.1.1
Probab=26.72 E-value=43 Score=30.15 Aligned_cols=121 Identities=12% Similarity=0.135 Sum_probs=75.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHH----HHhhhhcccCCHHHHHHHHHHHHcCCCHHHHH
Q 004076 562 GEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAY----VAVMQKVSASDRSGYESLLRVYRETDLSQEKT 637 (775)
Q Consensus 562 ~~ll~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~----~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~ 637 (775)
..++.+.+..++|.-..++-.++++|+++. ....-++++...| ..|...++.|..++-...+++|..... ..-.
T Consensus 12 ~~~~~~~~~~~dp~~y~~~y~~L~~wv~~s-ld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~-~~~~ 89 (156)
T 2nxp_A 12 SAVLSAYNQQGDPTMYEEYYSGLKHFIECS-LDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQE-CYYQ 89 (156)
T ss_dssp HHHHGGGSSCCCTTSHHHHHHHHHHHHHTS-CHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSC-GGGH
T ss_pred HHHHHHhhccCCHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhHHhH-HHHH
Confidence 345666667788999999999999999862 1112366666444 334455777778888899999987765 3445
Q ss_pred HHHHHhcCCCcHHHHHH-HHHHhccCcccccceeeeeeEccccHHHHHHHHHHH
Q 004076 638 RILSSLASCPDVNIVLE-VLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDN 690 (775)
Q Consensus 638 ~ll~aL~~~~d~~~l~~-~L~~~l~~~ir~qd~~~~~~v~~~g~~~~w~fl~~n 690 (775)
..+..|+....|.-++. -+.. ..|..- +.+.++.........||.++
T Consensus 90 ~~i~~L~~i~~~~~l~~n~~~~----~fr~~K--y~I~ls~~s~~lL~~fL~~~ 137 (156)
T 2nxp_A 90 DDLRVLSSLTKKEHMKGNETML----DFRTSK--FVLRISRDSYQLLKRHLQEK 137 (156)
T ss_dssp HHHHHHHTCCSHHHHTTCGGGG----GGCGGG--SEEEEEHHHHHHHHHHHTTS
T ss_pred HHHHHHhcCCCHHHHhhcHHHH----HHHhCC--eEEEECHHHHHHHHHHHHHc
Confidence 57777777777765421 1111 122111 22224444677777887764
No 36
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=26.01 E-value=44 Score=31.51 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHh
Q 004076 300 RVATVVAHELAHQW 313 (775)
Q Consensus 300 ~~~~~iaHElaHqW 313 (775)
..+.++||||+|.+
T Consensus 137 ~~a~~~AHElGH~l 150 (203)
T 1kuf_A 137 MVAVTMTHELGHNL 150 (203)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhhhhc
Confidence 36789999999995
No 37
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=24.93 E-value=39 Score=36.11 Aligned_cols=14 Identities=43% Similarity=0.783 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHh
Q 004076 300 RVATVVAHELAHQW 313 (775)
Q Consensus 300 ~~~~~iaHElaHqW 313 (775)
.++.++||||+|++
T Consensus 138 ~~a~t~AHElGHnl 151 (427)
T 2e3x_A 138 KTAVIMAHELSHNL 151 (427)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred eeeeehHHHHHHhh
Confidence 46789999999995
No 38
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=24.79 E-value=2.3e+02 Score=23.16 Aligned_cols=23 Identities=9% Similarity=0.066 Sum_probs=16.6
Q ss_pred CeEEEEEeCCCcCCceEEEEEEEE
Q 004076 85 DEILVLEFAETLPTGMGVLAIGFE 108 (775)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~y~ 108 (775)
...+.+.++ +|.+|.|+|.-+-.
T Consensus 64 ~~~~~~~l~-~L~~G~YtV~Wrvv 86 (102)
T 2c9r_A 64 KTMVITPAS-PLTAGTYKVDWRAV 86 (102)
T ss_dssp TEEEEEESS-CCCSEEEEEEEEEC
T ss_pred CcEEEEECC-CCCCceEEEEEEEE
Confidence 567788875 89999998764433
No 39
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=24.72 E-value=86 Score=33.05 Aligned_cols=14 Identities=43% Similarity=0.688 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHh
Q 004076 300 RVATVVAHELAHQW 313 (775)
Q Consensus 300 ~~~~~iaHElaHqW 313 (775)
..+.++||||+|..
T Consensus 138 ~~a~t~AHElGHnl 151 (397)
T 3k7n_A 138 LVASTITHELGHNL 151 (397)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999985
No 40
>2j49_A Transcription initiation factor TFIID subunit 5; nuclear protein, transcription regulation, TA TFIID, WD repeat; 2.3A {Saccharomyces cerevisiae} SCOP: d.379.1.1
Probab=24.03 E-value=1.5e+02 Score=26.28 Aligned_cols=109 Identities=11% Similarity=0.142 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHH----hhhhcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCC
Q 004076 572 GHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVA----VMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCP 647 (775)
Q Consensus 572 g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~----~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~~~~ 647 (775)
++|.-..++..++++|+++. ....-++++...|-+ |...++.| .++-...+++|..... ..-...++.|+...
T Consensus 5 ~dp~~y~~~y~~Lr~wv~~s-ld~yk~EL~~lLyPlFvh~yL~Lv~~g-~~~A~~F~~~f~~~~~-~~~~~~i~~L~~i~ 81 (148)
T 2j49_A 5 NAPENYIRAYSMLKNWVDSS-LEIYKPELSYIMYPIFIYLFLNLVAKN-PVYARRFFDRFSPDFK-DFHGSEINRLFSVN 81 (148)
T ss_dssp --CTTHHHHHHHHHHHHHTS-CTTTHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHGGGGH-HHHHHHHHTTTTCC
T ss_pred cCHHHHHHHHHHHHHHHHhC-cHhhHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHhHHhH-HHHHHHHHHHhcCC
Confidence 35666788999999999872 333457888866533 33456678 8888899999977654 45566889999888
Q ss_pred cHHHHH-HHHHHhc-cCcccccceeeeeeEccccHHHHHHHHHHH
Q 004076 648 DVNIVL-EVLNFLL-SSEVRSQDAVYGLAVSIEGRETAWKWLKDN 690 (775)
Q Consensus 648 d~~~l~-~~L~~~l-~~~ir~qd~~~~~~v~~~g~~~~w~fl~~n 690 (775)
.|.-++ .-+...+ +++ +.+.++.........||.+|
T Consensus 82 ~p~hl~~n~~~~~fr~nK-------y~I~ls~~s~~lL~~fL~~~ 119 (148)
T 2j49_A 82 SIDHIKENEVASAFQSHK-------YRITMSKTTLNLLLYFLNEN 119 (148)
T ss_dssp SHHHHHHCHHHHHHHSSC-------EEEEECHHHHHHHHHHHHHT
T ss_pred CHHHHhhCHHHHHHHhCC-------eEEEECHHHHHHHHHHHHHc
Confidence 877665 2222222 221 22224445677788888775
No 41
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=23.78 E-value=51 Score=35.08 Aligned_cols=14 Identities=43% Similarity=0.710 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHh
Q 004076 300 RVATVVAHELAHQW 313 (775)
Q Consensus 300 ~~~~~iaHElaHqW 313 (775)
.++.++||||+|++
T Consensus 136 ~~a~t~AHElGHnl 149 (419)
T 2dw0_A 136 VVAVIMAHEMGHNL 149 (419)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999996
No 42
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, MUR16; 2.00A {Methanocorpusculum labreanum}
Probab=23.19 E-value=2.2e+02 Score=26.81 Aligned_cols=21 Identities=29% Similarity=0.408 Sum_probs=16.3
Q ss_pred CcHHHHHHHHHHHHHHHHHHh
Q 004076 293 SAAANKQRVATVVAHELAHQW 313 (775)
Q Consensus 293 ~~~~~~~~~~~~iaHElaHqW 313 (775)
.......++..+++||+.|.+
T Consensus 135 ~~~l~~~Rv~k~~~HElGH~l 155 (210)
T 3lmc_A 135 DDSALIDRIVKEGAHEIGHLF 155 (210)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHhc
Confidence 334456678999999999986
No 43
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=22.81 E-value=44 Score=28.34 Aligned_cols=34 Identities=26% Similarity=0.451 Sum_probs=21.4
Q ss_pred cceeecccccccCCCCcHHHHHHHHHHHHHHHHHHh
Q 004076 278 LVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (775)
Q Consensus 278 li~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (775)
+++|+.. ++- --.+...-...+..++.||+||.+
T Consensus 69 I~lYR~P-i~~-~~~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 69 IIIYRNT-ICA-LCETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEHHH-HHH-TCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEehHH-HHH-HhCChhHHHHHHHHHHHHHHHHHc
Confidence 5666665 222 222333445667899999999985
No 44
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=22.46 E-value=2.5e+02 Score=23.04 Aligned_cols=23 Identities=13% Similarity=0.205 Sum_probs=16.6
Q ss_pred CeEEEEEeCCCcCCceEEEEEEEE
Q 004076 85 DEILVLEFAETLPTGMGVLAIGFE 108 (775)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~y~ 108 (775)
...+.+.++ +|.+|.|+|.-+-.
T Consensus 66 ~~~~~~~l~-~L~~G~YtV~Wrvv 88 (104)
T 1lyq_A 66 KSMVIIPRE-PLPAGTYRVDWRAV 88 (104)
T ss_dssp TEEEEEESS-CCCSEEEEEEEEEC
T ss_pred CcEEEEECC-CCCCceEEEEEEEE
Confidence 456778776 89999998764433
No 45
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=22.13 E-value=84 Score=33.40 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHh
Q 004076 300 RVATVVAHELAHQW 313 (775)
Q Consensus 300 ~~~~~iaHElaHqW 313 (775)
..+.++||||+|..
T Consensus 143 ~~a~t~AHElGHnl 156 (422)
T 3k7l_A 143 MVAITMAHEMGHNL 156 (422)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHc
Confidence 46789999999985
No 46
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=22.04 E-value=2.4e+02 Score=27.18 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=0.0
Q ss_pred HHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHH
Q 004076 557 DALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEK 636 (775)
Q Consensus 557 ~~~~R~~ll~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek 636 (775)
+...|..++..++..|.+. +...+...+.+ -++..|..+..++.. +...+....+.|.+...+.+ +.-|
T Consensus 141 ~~~vR~~a~~aL~~~~~~~----~~~~L~~~l~d-----~~~~vr~~a~~aL~~-~~~~~~~~~~~L~~~l~d~~-~~vR 209 (280)
T 1oyz_A 141 STNVRRATAFAISVINDKA----TIPLLINLLKD-----PNGDVRNWAAFAINI-NKYDNSDIRDCFVEMLQDKN-EEVR 209 (280)
T ss_dssp CHHHHHHHHHHHHTC---C----CHHHHHHHHTC-----SSHHHHHHHHHHHHH-HTCCCHHHHHHHHHHTTCSC-HHHH
T ss_pred CHHHHHHHHHHHHhcCCHH----HHHHHHHHHcC-----CCHHHHHHHHHHHHh-hccCcHHHHHHHHHHhcCCC-HHHH
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHhccCccc
Q 004076 637 TRILSSLASCPDVNIVLEVLNFLLSSEVR 665 (775)
Q Consensus 637 ~~ll~aL~~~~d~~~l~~~L~~~l~~~ir 665 (775)
...+.+|+...++..+..++...-++.+|
T Consensus 210 ~~A~~aL~~~~~~~~~~~L~~~l~d~~vr 238 (280)
T 1oyz_A 210 IEAIIGLSYRKDKRVLSVLCDELKKNTVY 238 (280)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHHHTSSSCC
T ss_pred HHHHHHHHHhCCHhhHHHHHHHhcCccHH
No 47
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=21.68 E-value=4.6e+02 Score=28.20 Aligned_cols=92 Identities=13% Similarity=0.003 Sum_probs=62.5
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHH--HHHHHhhhhcccCCHHHHHHHHHHHHcC---CCHHHH
Q 004076 562 GEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRK--AAYVAVMQKVSASDRSGYESLLRVYRET---DLSQEK 636 (775)
Q Consensus 562 ~~ll~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~--~v~~~~~~~~~~g~~~~~~~l~~~y~~~---~~~~ek 636 (775)
..++...|..|. +++|.++|+..... -+.|+... .+...+| +.|.-++-..+++..... .+...=
T Consensus 109 n~lI~~~~~~g~---~~~A~~l~~~M~~~----g~~Pd~~tyn~lI~~~~---~~g~~~~A~~l~~~M~~~G~~Pd~~ty 178 (501)
T 4g26_A 109 TNGARLAVAKDD---PEMAFDMVKQMKAF----GIQPRLRSYGPALFGFC---RKGDADKAYEVDAHMVESEVVPEEPEL 178 (501)
T ss_dssp HHHHHHHHHHTC---HHHHHHHHHHHHHT----TCCCCHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHhcCC---HHHHHHHHHHHHHc----CCCCccceehHHHHHHH---HCCCHHHHHHHHHHHHhcCCCCCHHHH
Confidence 357788888887 57888889877653 25677665 2223333 367766666666666544 245556
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHhccCc
Q 004076 637 TRILSSLASCPDVNIVLEVLNFLLSSE 663 (775)
Q Consensus 637 ~~ll~aL~~~~d~~~l~~~L~~~l~~~ 663 (775)
..++.+++...+.+...++|+...+..
T Consensus 179 ~~Li~~~~~~g~~d~A~~ll~~Mr~~g 205 (501)
T 4g26_A 179 AALLKVSMDTKNADKVYKTLQRLRDLV 205 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHhC
Confidence 668999999999888888888776543
No 48
>4fca_A Conserved domain protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 2.06A {Bacillus anthracis}
Probab=20.55 E-value=74 Score=34.89 Aligned_cols=56 Identities=11% Similarity=0.166 Sum_probs=38.6
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHh--ccCCC---CHHHHHHHHHhccCCCHHHHHHHh
Q 004076 396 ASVIRMLQNYLGAECFQRSLASYIKKY--ACSNA---KTEDLWAALEEGSGEPVNKLMNSW 451 (775)
Q Consensus 396 ~~vl~mL~~~lG~~~F~~~l~~yl~~~--~~~~~---~~~df~~~l~~~~g~~l~~~~~~W 451 (775)
-.++..|+...|.+.|.+.-+.|=... ..... ..+.|...+.+++|.||.+||+.|
T Consensus 318 L~mf~QL~l~fG~~fy~~l~~~yR~~~~~~~p~~~~~k~~~fv~~~S~~ag~nLtpFFe~W 378 (525)
T 4fca_A 318 LVMFWQLHLAYGDQFYPNLHQMYRLLHDTELPKSDEEKKQMFIYMTSKVAGQNLIPFFDKW 378 (525)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHTCCGGGSCCSHHHHHHHHHHHHHHHHTSBCHHHHHHT
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHhccccCCCCCcHHHHHHHHHHHHHHHCCChHHHHHHH
Confidence 445677778889887776666665321 11111 135577788899999999999999
Done!