Query 004077
Match_columns 775
No_of_seqs 413 out of 3193
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 13:31:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004077.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004077hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 3E-119 1E-123 1046.9 51.9 624 107-775 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2E-109 6E-114 968.5 48.9 609 107-774 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.4E-82 4.8E-87 770.9 45.4 542 132-774 8-605 (926)
4 3afg_A Subtilisin-like serine 100.0 4.5E-60 1.6E-64 541.8 29.5 367 22-635 34-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.1E-57 3.8E-62 505.9 21.7 344 22-634 1-392 (395)
6 3t41_A Epidermin leader peptid 100.0 1.5E-55 5E-60 501.3 26.3 336 63-636 66-467 (471)
7 1y9z_A Alkaline serine proteas 100.0 2.7E-55 9.2E-60 493.7 25.1 378 132-654 15-436 (441)
8 1r6v_A Subtilisin-like serine 100.0 2.4E-53 8.4E-58 491.4 26.8 375 22-645 30-450 (671)
9 2p4e_P Proprotein convertase s 100.0 1E-55 3.4E-60 507.7 5.5 337 25-602 77-423 (692)
10 1dbi_A AK.1 serine protease; h 100.0 1.1E-51 3.7E-56 436.2 23.4 258 132-633 22-279 (280)
11 1r0r_E Subtilisin carlsberg; h 100.0 5E-52 1.7E-56 437.7 20.2 256 132-633 15-274 (274)
12 1gci_A Subtilisin; hydrolase, 100.0 7.6E-52 2.6E-56 434.6 21.4 255 132-633 15-269 (269)
13 1to2_E Subtilisin BPN'; serine 100.0 1.3E-51 4.4E-56 435.9 21.3 258 132-634 15-276 (281)
14 4h6x_A Thiazoline oxidase/subt 100.0 2.3E-53 7.9E-58 464.6 6.0 308 132-633 22-337 (357)
15 2x8j_A Intracellular subtilisi 100.0 2.9E-51 1E-55 442.3 19.7 264 132-634 32-311 (327)
16 1thm_A Thermitase; hydrolase(s 100.0 8.9E-51 3E-55 429.3 22.5 257 132-633 22-278 (279)
17 3zxy_A Subtilisin-like protein 100.0 2.2E-51 7.4E-56 435.4 14.3 267 137-633 3-274 (282)
18 2ixt_A 36KDA protease; serine 100.0 8.3E-50 2.8E-54 429.3 24.7 280 132-628 17-309 (310)
19 2z30_A TK-subtilisin; thermoco 100.0 2.3E-50 8E-55 434.7 16.3 264 132-634 19-317 (320)
20 4h6w_A N-terminal cyanobactin 100.0 1.3E-50 4.6E-55 434.8 13.5 272 132-633 12-287 (306)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 1.6E-49 5.5E-54 433.7 18.2 270 132-635 34-330 (347)
22 1wmd_A Protease; alpha-beta hy 100.0 1.1E-48 3.7E-53 439.6 21.1 294 132-636 12-320 (434)
23 3lpc_A APRB2; protease, subtil 100.0 7.9E-49 2.7E-53 427.3 18.7 298 132-635 23-338 (340)
24 3lxu_X Tripeptidyl-peptidase 2 100.0 3.9E-48 1.3E-52 465.2 23.8 355 217-774 267-652 (1354)
25 1sh7_A Extracellular subtilisi 100.0 2.3E-47 7.8E-52 403.5 24.2 236 132-603 20-258 (284)
26 2pwa_A Proteinase K; structure 100.0 2.3E-47 8E-52 402.4 17.9 229 133-602 24-260 (279)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 7.2E-47 2.5E-51 399.3 21.6 237 132-604 22-261 (276)
28 2b6n_A Proteinase K; S binding 100.0 6.9E-47 2.4E-51 399.3 20.9 237 132-602 22-261 (278)
29 2oxa_A Extracellular serine pr 100.0 1.4E-46 4.9E-51 438.3 22.0 299 131-639 60-430 (600)
30 1p8j_A Furin precursor; prohor 100.0 2.6E-46 8.9E-51 423.8 19.0 291 132-636 29-332 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 1.2E-45 3.9E-50 421.2 18.9 284 132-637 45-345 (503)
32 2qtw_B Proprotein convertase s 100.0 2.2E-45 7.6E-50 411.6 19.6 279 132-633 17-313 (546)
33 3f7m_A Alkaline serine proteas 100.0 2.2E-45 7.6E-50 388.5 17.8 231 132-603 24-262 (279)
34 3hjr_A Extracellular serine pr 100.0 1.2E-42 4.2E-47 406.7 24.9 296 132-636 61-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 6.5E-25 2.2E-29 250.7 6.0 97 248-358 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.8 2.4E-21 8.2E-26 210.9 8.3 100 251-359 91-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.9 3.8E-09 1.3E-13 119.8 10.1 77 282-358 284-374 (544)
38 3icu_A E3 ubiquitin-protein li 98.8 2.9E-08 9.8E-13 96.5 11.9 95 405-499 82-188 (194)
39 2w2n_P Proprotein convertase s 98.7 1.3E-08 4.6E-13 91.0 5.4 76 22-105 36-113 (114)
40 3cnq_P Subtilisin BPN'; unclea 98.5 2E-07 6.9E-12 77.9 7.2 72 21-109 6-79 (80)
41 2qtw_A Proprotein convertase s 98.3 5E-07 1.7E-11 81.7 5.5 76 22-105 46-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 98.2 2.7E-06 9.2E-11 70.1 7.1 67 24-104 3-74 (76)
43 2ek8_A Aminopeptidase; metallo 96.7 0.0042 1.5E-07 68.5 9.6 73 413-485 107-182 (421)
44 2z30_B TK-subtilisin; thermoco 96.1 0.0056 1.9E-07 48.3 4.6 40 62-104 22-63 (65)
45 3iib_A Peptidase M28; YP_92679 96.0 0.024 8.3E-07 62.8 10.7 82 416-497 124-226 (444)
46 3kas_A Transferrin receptor pr 95.5 0.015 5E-07 67.2 6.8 69 417-485 128-230 (640)
47 3fed_A Glutamate carboxypeptid 95.5 0.016 5.3E-07 67.7 6.8 71 416-486 150-268 (707)
48 2ys4_A Hydrocephalus-inducing 93.2 0.3 1E-05 43.5 8.5 52 684-740 40-91 (122)
49 3lxu_X Tripeptidyl-peptidase 2 88.0 0.23 7.9E-06 61.1 3.3 24 137-160 32-55 (1354)
50 1y9z_A Alkaline serine proteas 86.2 0.43 1.5E-05 52.7 3.9 31 504-542 181-211 (441)
51 2r39_A FIXG-related protein; s 86.1 9.5 0.00032 33.3 12.0 53 687-741 33-85 (118)
52 3qbt_B Inositol polyphosphate 83.3 8 0.00027 35.1 10.5 89 685-774 43-137 (140)
53 2e6j_A Hydin protein; PAPD, st 79.0 5 0.00017 34.5 7.3 55 685-740 26-81 (112)
54 3zyz_A Beta-D-glucoside glucoh 71.3 30 0.001 40.3 13.1 87 685-774 613-712 (713)
55 3qis_A Inositol polyphosphate 62.7 69 0.0024 33.8 13.0 56 685-741 46-105 (366)
56 3idu_A Uncharacterized protein 58.7 36 0.0012 30.2 8.2 52 684-739 32-84 (127)
57 3isy_A Bsupi, intracellular pr 57.7 63 0.0022 28.2 9.5 72 683-760 16-104 (120)
58 2qsv_A Uncharacterized protein 57.4 46 0.0016 32.3 9.7 52 685-740 19-70 (220)
59 2x41_A Beta-glucosidase; hydro 48.5 28 0.00096 40.6 7.5 66 672-740 597-677 (721)
60 1m1s_A WR4; structural genomic 47.4 80 0.0027 27.4 8.4 50 687-739 25-74 (116)
61 1z9l_A Vesicle-associated memb 47.3 56 0.0019 28.7 7.7 52 685-739 27-78 (128)
62 3abz_A Beta-glucosidase I; gly 45.7 40 0.0014 40.0 8.2 157 557-738 618-795 (845)
63 1row_A SSP-19, MSP-domain prot 43.7 82 0.0028 26.9 7.9 49 688-739 18-66 (109)
64 2qsv_A Uncharacterized protein 43.0 2E+02 0.0067 27.7 11.7 52 685-739 134-185 (220)
65 1msp_A MSP, major sperm protei 42.4 59 0.002 28.6 7.0 51 686-739 26-76 (126)
66 1wic_A Hypothetical protein ri 42.2 57 0.0019 29.8 7.0 52 686-740 36-87 (152)
67 2cri_A Vesicle-associated memb 34.8 68 0.0023 29.0 6.3 53 685-740 31-83 (147)
68 1wgl_A TOLL-interacting protei 32.3 33 0.0011 26.0 3.0 36 565-600 3-38 (59)
69 1w8o_A Bacterial sialidase; 3D 30.3 2.8E+02 0.0095 30.9 12.0 63 674-740 363-426 (601)
70 3e9t_A Na/Ca exchange protein; 27.6 1.7E+02 0.0059 24.9 7.4 64 675-739 9-76 (114)
71 3ndz_E Endoglucanase D; cellot 27.3 2.8E+02 0.0097 23.4 9.2 32 685-716 15-47 (107)
72 2kq1_A BH0266 protein; solutio 26.6 14 0.00048 32.3 0.1 52 688-739 56-109 (119)
73 1ni7_A ER75, hypothetical prot 25.9 50 0.0017 30.3 3.7 31 561-592 79-109 (155)
74 3g0m_A Cysteine desulfuration 22.0 48 0.0016 29.9 2.7 33 559-592 70-102 (141)
75 2l0d_A Cell surface protein; s 20.3 2.6E+02 0.0088 24.0 6.9 24 684-707 18-42 (114)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=3.4e-119 Score=1046.90 Aligned_cols=624 Identities=39% Similarity=0.648 Sum_probs=559.1
Q ss_pred ccCCccccccchhhhcccCcccccccccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccc
Q 004077 107 TTRSWEFVGLDEVAKQNWNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLC 186 (775)
Q Consensus 107 ~~~s~~~~gl~~~~~~~~~~~~~~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~ 186 (775)
|+++|+|+||.+. . .+|..+.+|+||+|||||||||++||+|.+.+++|+|.+|+|.|+.|.+|+...|
T Consensus 1 Tt~s~~flgl~~~-----~------~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~c 69 (649)
T 3i6s_A 1 TTHTSDFLKLNPS-----S------GLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMC 69 (649)
T ss_dssp CCSHHHHTTCCSS-----S------SHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSC
T ss_pred CCCChHHcCCCCc-----h------hhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCcccccccc
Confidence 5789999999742 2 7999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeecccccccccCCCCCCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecC
Q 004077 187 NKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWA 266 (775)
Q Consensus 187 n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~ 266 (775)
|+|++++++|.+++.... .+...+..+++|..||||||||||||+.+++.+++ |++.+.++||||+|+|++||+|+.
T Consensus 70 N~kiig~~~f~~~~~~~~--~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~-G~~~g~~~GvAP~A~l~~~kv~~~ 146 (649)
T 3i6s_A 70 NRKLIGANYFNKGILAND--PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHF-GYAPGTARGVAPRARLAVYKFSFN 146 (649)
T ss_dssp CSSEEEEEECCHHHHHHC--TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEET-TEEEEEECCSSTTCEEEEEECEET
T ss_pred ccceeeeEeccCcccccc--cccccCCCCCCCCCCcHHHHHHHHhCCCCcCcccc-ccccCceeEECCCCEEEEEeccCC
Confidence 999999999987655332 22334556789999999999999999988887777 788888999999999999999998
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCC
Q 004077 267 TPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNL 346 (775)
Q Consensus 267 ~~~g~~~~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ 346 (775)
. | +..+++++||+||+++|+||||||||.. ...+..+++.+++++|.++||+||+||||+|+...++.+.
T Consensus 147 ~--g-------~~~~~i~~Ai~~A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ 216 (649)
T 3i6s_A 147 E--G-------TFTSDLIAAMDQAVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNG 216 (649)
T ss_dssp T--E-------ECHHHHHHHHHHHHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCC
T ss_pred C--C-------CCHHHHHHHHHHHHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCC
Confidence 6 4 8999999999999999999999999984 4567789999999999999999999999999999999999
Q ss_pred CCceEEecccccccccccceEeCCCcEEeeeeeccCCC-CcceeeEEecccccCCcCCCCCCCcCCCCCCCCce--eceE
Q 004077 347 APWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNL-KKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKV--KGKI 423 (775)
Q Consensus 347 ~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gki 423 (775)
+||+|+|||++.+|.|...+.+++++++.|++++.... ...+|+++.. ....|.+..+++.++ +|||
T Consensus 217 ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~----------~~~~C~~~~l~~~~vdl~GkI 286 (649)
T 3i6s_A 217 SPWILCVASGHTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK----------TLSDCSSEELLSQVENPENTI 286 (649)
T ss_dssp CTTSEEEEEEECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT----------TTTTCCCHHHHTTSSSGGGCE
T ss_pred CCceEEEeeeecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc----------cccccccccccccccccCCcE
Confidence 99999999999999999999999999999999987764 6678888865 356799988888877 9999
Q ss_pred EEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeec
Q 004077 424 VLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHT 503 (775)
Q Consensus 424 vl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~ 503 (775)
|+|+||.+.+.+|..+++.+|+.|+|++|+. .....+.+.+|..+|+.++|..|++|++++.+++++|.+..+..+.
T Consensus 287 vlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~ 363 (649)
T 3i6s_A 287 VICDDNGDFSDQMRIITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDT 363 (649)
T ss_dssp EEECCCSCHHHHHHHHHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCC
T ss_pred EEEeCCCccHHHHHHHHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeecc
Confidence 9999999999999999999999999999986 4556677899999999999999999999999999999999999888
Q ss_pred CCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCc-cccccEEeeccCchhhHHHHHHHHHHHhC
Q 004077 504 QPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDK-RIVKYTIFSGTSMSCPHVAAAAALLKAIH 582 (775)
Q Consensus 504 ~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~ 582 (775)
.+.+.++.||||||+...++++||||+|||++|+++++..........+. +...|..+||||||||||||++|||||+|
T Consensus 364 ~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~ 443 (649)
T 3i6s_A 364 KPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAH 443 (649)
T ss_dssp SSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhC
Confidence 88999999999999997789999999999999999998865444333333 44789999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCCCcccCC-CCCCCCCCccceeccCccccCCCCeeeecchhhHHHhhhcCCCCCC----
Q 004077 583 PDWSSAAIRSALMTTAWMKNNKALPITNA-DGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFT---- 657 (775)
Q Consensus 583 P~~s~~~ik~~L~~TA~~~~~~g~~~~~~-~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~---- 657 (775)
|+|+|++||++||+||+++++.+.++.+. .+.++++++||+|+||+.+|++||||||++.+||++|||++||+.+
T Consensus 444 P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~ 523 (649)
T 3i6s_A 444 PEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKT 523 (649)
T ss_dssp TTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHH
T ss_pred CCCCHHHHHHHHhcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCccccee
Confidence 99999999999999999999999888775 4668899999999999999999999999999999999999999865
Q ss_pred --CCccc--CCCCCCCCCCCCCCeeEeec-CCce-----EEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccC
Q 004077 658 --NPVFR--CPNKPPSALNLNYPSIAIPN-LNGT-----VIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHI 727 (775)
Q Consensus 658 --~~~~~--~~~~~~~~~~ln~ps~~~~~-~~~~-----~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~ 727 (775)
+..+. |+. ...+||||||++.. +.++ ++|+|||||||....+|++.++.|.|++|+|+|.+|+|.+.
T Consensus 524 ~~~~~~~~~C~~---~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~ 600 (649)
T 3i6s_A 524 IARSSASHNCSN---PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNK 600 (649)
T ss_dssp HHTTTSCC-CCC---CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-
T ss_pred eecCCCcCCCCC---chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecC
Confidence 45566 985 45799999999987 5666 89999999999989999999999999999999999999989
Q ss_pred CcEEEEEEEEEECcccccccCCCceEEEEEEEEC--CccEEEeEEEEEeC
Q 004077 728 GQKKSFTITVRLGSETTRQGLTKQYVFGWYRWTD--GLHLVRSPMAVSFA 775 (775)
Q Consensus 728 ~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~v~~P~~~~~~ 775 (775)
+|+++|+|+|+.. ....+.|.||+|+|+| +.|.||+||+|++.
T Consensus 601 ~~~~~f~v~~~~~-----~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 601 NEKQSYTLTIRYI-----GDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp CCEEEEEEEEEEC-----CC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred CCEEEEEEEEEec-----ccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 9999999999983 3445678999999999 89999999999873
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.9e-109 Score=968.53 Aligned_cols=609 Identities=40% Similarity=0.718 Sum_probs=516.8
Q ss_pred ccCCccccccchhhhcccCcccccccccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccc
Q 004077 107 TTRSWEFVGLDEVAKQNWNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLC 186 (775)
Q Consensus 107 ~~~s~~~~gl~~~~~~~~~~~~~~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~ 186 (775)
|+++|+|+||++ .+|.+..+|+||+|||||||||++||+|+|+++++++.+|+|.|+.+.+| .|
T Consensus 1 tt~s~~flGl~~-------------~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~---~~ 64 (621)
T 3vta_A 1 TTRSWDFLGFPL-------------TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNF---RC 64 (621)
T ss_dssp CCSHHHHTTCCT-------------TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSC---CC
T ss_pred CCCChhHcCCCc-------------cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCc---cc
Confidence 578999999974 57888889999999999999999999999999999999999999998877 69
Q ss_pred cceeeeeeecccccccccCCCCCCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecC
Q 004077 187 NKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWA 266 (775)
Q Consensus 187 n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~ 266 (775)
|+|++++++|..+.... ..+..+++|++||||||||||||+..++.+.. |.+.+.++||||+|+|++||+|++
T Consensus 65 n~k~ig~~~~~~~~~~~------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~-g~~~g~~~GvAP~A~l~~~kv~~~ 137 (621)
T 3vta_A 65 NRKIIGARSYHIGRPIS------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLY-GLGLGTARGGVPLARIAAYKVCWN 137 (621)
T ss_dssp CSSEEEEEECCCSSSCC------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEET-TEEEEEECCSCTTSEEEEEECEET
T ss_pred CcceeeeeecccCCccC------CCCCCCCCCCCcCHHHHHHHHhCcCCCCcccc-ccccccEEEECCCCEEEEEEeecC
Confidence 99999999998764432 23445789999999999999999987777666 777788999999999999999998
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHhCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCC
Q 004077 267 TPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNL 346 (775)
Q Consensus 267 ~~~g~~~~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ 346 (775)
. | |..+++++||++|+++|+||||||||+....++..+++++++++|.++||+||+||||+|+...++.+.
T Consensus 138 ~--g-------~~~~di~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~ 208 (621)
T 3vta_A 138 D--G-------CSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASL 208 (621)
T ss_dssp T--E-------ECHHHHHHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCC
T ss_pred C--C-------CCHHHHHHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCC
Confidence 7 5 889999999999999999999999998656667788999999999999999999999999999999999
Q ss_pred CCceEEecccccccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEE
Q 004077 347 APWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLC 426 (775)
Q Consensus 347 ~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~ 426 (775)
+||+++|++++.++.|...+.++++..+.+.++.... ...++++.+.+.............|.+..+++.+++|||++|
T Consensus 209 a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~ 287 (621)
T 3vta_A 209 SPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFD-NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVC 287 (621)
T ss_dssp CTTSEEEEEECCSEEEEEEEEETTSCEEEEBCCCCSC-CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEEC
T ss_pred CCCceeEEEeeccccceeeEEeccCceeeeeecccCC-CcccccccccccccccccccccccccccccccccccceEEEE
Confidence 9999999999999999999999999999988876543 456777777665544444455678999999999999999999
Q ss_pred ecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCC
Q 004077 427 MRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPA 506 (775)
Q Consensus 427 ~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~ 506 (775)
+++. ..+..+....|+.+++++++... ..+.+.+|...++..++..+..|+.....+.+.+....+. .....
T Consensus 288 ~~~~---~~~~~~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~ 359 (621)
T 3vta_A 288 EASF---GPHEFFKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASA 359 (621)
T ss_dssp SSCC---CHHHHHHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTC
T ss_pred ecCC---ChhHHhhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCC
Confidence 8753 45667778899999999987543 3456789999999999999999999999888888666554 44568
Q ss_pred CccccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCC
Q 004077 507 PFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWS 586 (775)
Q Consensus 507 ~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s 586 (775)
+.++.||||||+...++++||||+|||++|+|+++...... ...+...|..|||||||||||||++|||||+||+|+
T Consensus 360 ~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~---~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~s 436 (621)
T 3vta_A 360 PVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVG---GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWS 436 (621)
T ss_dssp CCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSSCBT---TBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CceeeecCCCCCCCCCCeeccccccCCcceEeecCcccccc---CcCCCCcceEecCccccchhhhhHHHHHHHHCCCCC
Confidence 89999999999987789999999999999999998643322 123346899999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCCCcccCCCCCCCCCCccceeccCccccCCCCeeeecchhhHHHhhhcCCCCCC------CCc
Q 004077 587 SAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFT------NPV 660 (775)
Q Consensus 587 ~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~------~~~ 660 (775)
|++||++||+||++++..+ .++.+++||+|+||+.+|++||||||++..||+.|||+++|+++ +..
T Consensus 437 pa~IksaLmtTA~~~~~~~--------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~ 508 (621)
T 3vta_A 437 PAAIKSALMTTASPMNARF--------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDY 508 (621)
T ss_dssp HHHHHHHHHHTCBCCCTTT--------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC--------------------
T ss_pred HHHHHHHHHhcCCcccccC--------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccc
Confidence 9999999999999887653 34678999999999999999999999999999999999999876 345
Q ss_pred ccCCCC-CCCCCCCCCCeeEee---cCCceEEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEE
Q 004077 661 FRCPNK-PPSALNLNYPSIAIP---NLNGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTIT 736 (775)
Q Consensus 661 ~~~~~~-~~~~~~ln~ps~~~~---~~~~~~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~ 736 (775)
..|+.. .....+||||||++. ++..+++|+|||||+|....||+++++.|.|++|+|+|.+|+|++.+|+++|+|+
T Consensus 509 ~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt 588 (621)
T 3vta_A 509 SACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLT 588 (621)
T ss_dssp ---------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEE
T ss_pred cccCCCCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEE
Confidence 667654 334679999999984 5667899999999999999999999999999999999999999989999999999
Q ss_pred EEECcccccccCCCceEEEEEEEECCccEEEeEEEEEe
Q 004077 737 VRLGSETTRQGLTKQYVFGWYRWTDGLHLVRSPMAVSF 774 (775)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~~P~~~~~ 774 (775)
|+. ..++.|.||+|+|+|+.|.||+||+|+.
T Consensus 589 ~~~-------~~~~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 589 VRG-------SIKGFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp EEE-------CCCSSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred EEe-------cCCCceEEEEEEEEcCCEEEEeCEEEEE
Confidence 986 2567899999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.4e-82 Score=770.88 Aligned_cols=542 Identities=23% Similarity=0.272 Sum_probs=426.5
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCcc----------Ccccccceeeeeeecccccc
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAF----------NSSLCNKKIIGARYYLKGFE 201 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~----------~~~~~n~kiig~~~~~~~~~ 201 (775)
.+|..+++|+||+|||||||||++||+|.+. ..|++.|..+..| ....||+|++++++|.++.
T Consensus 8 ~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~- 80 (926)
T 1xf1_A 8 TLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG- 80 (926)
T ss_dssp HHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS-
T ss_pred HHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccCC-
Confidence 7999999999999999999999999999853 4677777543322 2347999999999987631
Q ss_pred cccCCCCCCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHH
Q 004077 202 QLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEA 281 (775)
Q Consensus 202 ~~~~~~~~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~ 281 (775)
...|+.||||||||||||+...+.+. .+.+.||||+|+|++||+|++...+ +..+
T Consensus 81 -------------~~~D~~gHGThVAgiiAg~~~~~~~~-----~~~~~GvAP~A~l~~~kv~~~~g~~-------~~~~ 135 (926)
T 1xf1_A 81 -------------KTAVDQEHGTHVSGILSGNAPSETKE-----PYRLEGAMPEAQLLLMRVEIVNGLA-------DYAR 135 (926)
T ss_dssp -------------CCCCSSTTTTHHHHSSCCCCCCCCSC-----SCCTTTTCTTSEEEEEECCCCSCHH-------HHHH
T ss_pred -------------CCCCCCCcHHHHHHHHhCCCccCccc-----CCceEEECCCCEEEEEEeecCCCCC-------CcHH
Confidence 12288999999999999986543221 2457899999999999999876222 5668
Q ss_pred HHHHHHHHHHhCCceEEEEccCCCCC-CCCCccHHHHHHHHHHcCCcEEEEecCCCCCC-------------CCCCCCC-
Q 004077 282 DMLAAIDDAIRDGVHVLSISIGTNQP-FAFNRDGIAIGALNAVKHNILVACSAGNSGPA-------------PSSLSNL- 346 (775)
Q Consensus 282 ~i~~ai~~a~~~gvdVIn~SlG~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------------~~~~~~~- 346 (775)
++++||++|+++|+||||||||+... .....++++++++.|.++||+||+||||+|+. ..++.++
T Consensus 136 ~i~~Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA 215 (926)
T 1xf1_A 136 NYAQAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPA 215 (926)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCT
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcc
Confidence 89999999999999999999998432 34566788899999999999999999999963 2334444
Q ss_pred -CCceEEecccccccccccceEe-CCCcEEeeeeecc---CCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceec
Q 004077 347 -APWLITVGAGSLDRDFVGPVVL-GTGMEIIGKTVTP---YNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKG 421 (775)
Q Consensus 347 -~p~vitVgAs~~~~~~~~~~~~-~~~~~~~g~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g 421 (775)
+||+|+|||++.++.+...+.+ +++....+.++.. ......+|+++... .|.+..+ .+++|
T Consensus 216 ~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~G 281 (926)
T 1xf1_A 216 AADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKG 281 (926)
T ss_dssp TTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTT
T ss_pred cCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCC
Confidence 6999999999999999888887 5554444444322 22266788887643 3766655 68999
Q ss_pred eEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCc-cccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEE
Q 004077 422 KIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE-YSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTV 500 (775)
Q Consensus 422 kivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~-~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~ 500 (775)
|||||+||.|.+.+|..+++.+|+.|+|++|+...... .......+|..+++.++|..|.+ ....+.++......
T Consensus 282 kivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~ 357 (926)
T 1xf1_A 282 KIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKV 357 (926)
T ss_dssp SEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEE
T ss_pred eEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEeccccee
Confidence 99999999999999999999999999999998654332 23456789999999999998874 44555555544444
Q ss_pred eecCCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHH
Q 004077 501 LHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKA 580 (775)
Q Consensus 501 ~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q 580 (775)
......+.++.||||||+. ++++||||+|||++|+|+++. +.|..+||||||||||||++|||+|
T Consensus 358 ~~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q 422 (926)
T 1xf1_A 358 LPTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQK 422 (926)
T ss_dssp EECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHH
T ss_pred cccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHH
Confidence 5566688999999999996 799999999999999999986 6899999999999999999999965
Q ss_pred ----hCCCCCHHH----HHHHHHhcccccCCCCCcccCCCCCCCCCCccceeccCccccCCCCeeeecchhhHHHhhhcC
Q 004077 581 ----IHPDWSSAA----IRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSH 652 (775)
Q Consensus 581 ----~~P~~s~~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~ 652 (775)
.||.|+|++ ||++||+||+++...+ ....+++++||+|+||+.+|+++.+ |||..
T Consensus 423 ~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~ 485 (926)
T 1xf1_A 423 QYETQYPDMTPSERLDLAKKVLMSSATALYDED------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDK 485 (926)
T ss_dssp HHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEES
T ss_pred HHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC------CCccCChhccCCCccCHHHhcCCCe-----------EEEcC
Confidence 599999997 9999999999875431 1234678899999999999999865 56765
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCCeeEeecCCceEEEEEEEEecCCCC--eEEEEEeeC--CCCcEEEEecceEEEc---
Q 004077 653 GFSFTNPVFRCPNKPPSALNLNYPSIAIPNLNGTVIVKRTVTNVGGSK--SVYFFSAKP--PMGVSVKANPSILFFD--- 725 (775)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~t~~~tv~n~~~~~--~ty~~~~~~--~~g~~~~v~p~~~~~~--- 725 (775)
+++. +++.++++..+.+++|||||+|+.+ .+|++.+.. |.+..++|+|..|.|.
T Consensus 486 ~~~~-------------------~~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~ 546 (926)
T 1xf1_A 486 DNTS-------------------SKVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQ 546 (926)
T ss_dssp SSSC-------------------SCEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCE
T ss_pred CCCc-------------------ceeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCC
Confidence 4331 2455555667899999999999854 577777764 6788888888876654
Q ss_pred ----cCCcEEEEEEEEEECcc---cccccCCCceEEEEEEEE--CCcc-EEEeEEEEEe
Q 004077 726 ----HIGQKKSFTITVRLGSE---TTRQGLTKQYVFGWYRWT--DGLH-LVRSPMAVSF 774 (775)
Q Consensus 726 ----~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~g~~~~~--~~~~-~v~~P~~~~~ 774 (775)
++||+++|+|+|+.... .+..++++.|+||+|+|+ ++.| .||+||++..
T Consensus 547 ~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 547 KITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred eEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 35999999999997410 001245677899999999 5655 5999999864
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=4.5e-60 Score=541.81 Aligned_cols=367 Identities=29% Similarity=0.434 Sum_probs=283.0
Q ss_pred CCceEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhhcceEEeeceeEeEEEEEcCHHHHHhh-----------cc
Q 004077 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARL-----------SE 90 (775)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~~~~l~~~~~~~L-----------~~ 90 (775)
++-.|||.||+... .+...++++.+ ..+++++|+ .|+||+++++.+++++| ++
T Consensus 34 ~~~~~iV~~~~~~~--------~~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~ 97 (539)
T 3afg_A 34 QEVSTIIMFDNQAD--------KEKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQ 97 (539)
T ss_dssp CEEEEEEEESSHHH--------HHHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCC
T ss_pred CceEEEEEECCCCC--------HHHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhcccccccccc
Confidence 34579999996541 11222333332 246889996 59999999999999999 55
Q ss_pred --ccceEEecCCCcccccccCCccccccchhhhcccCcccccccccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 004077 91 --EVVSVYPSHPEKYSLQTTRSWEFVGLDEVAKQNWNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVP 168 (775)
Q Consensus 91 --~V~~V~~~~~~~~~~~~~~s~~~~gl~~~~~~~~~~~~~~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~ 168 (775)
+|++|++++ .+++.... .+++.... . ...+.+|..+++|+||+|||||||||++||+|.+
T Consensus 98 ~~~V~~v~~d~--~~~~~~~~----~~~~~~~~-~----~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~------- 159 (539)
T 3afg_A 98 LSGVQFIQEDY--VVKVAVET----EGLDESAA-Q----VMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG------- 159 (539)
T ss_dssp CTTEEEEEECC--EEECC----------------C----CBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT-------
T ss_pred CCCeeEEEecc--cccccCcc----ccCCcccc-c----cCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC-------
Confidence 999999999 77664321 22221100 0 0112789999999999999999999999999963
Q ss_pred CCccceeecCCccCcccccceeeeeeecccccccccCCCCCCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcc
Q 004077 169 KSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGT 248 (775)
Q Consensus 169 ~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~ 248 (775)
++++.++|..+ ...+.|+.||||||||||||+.. ...+.
T Consensus 160 --------------------~i~~~~d~~~~-------------~~~~~D~~gHGThVAgiiag~~~--------~~~g~ 198 (539)
T 3afg_A 160 --------------------KVIGWVDFVNG-------------KTTPYDDNGHGTHVASIAAGTGA--------ASNGK 198 (539)
T ss_dssp --------------------TEEEEEETTTC-------------CSSCCBSSSHHHHHHHHHHCCCG--------GGTTT
T ss_pred --------------------CEeeeEECCCC-------------CCCCCCCCCCHHHHHHHHhCcCc--------cCCCC
Confidence 35556666543 12567899999999999998731 12344
Q ss_pred eeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHhC----CceEEEEccCCCCCCCCCccHHHHHHHHHHc
Q 004077 249 ASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD----GVHVLSISIGTNQPFAFNRDGIAIGALNAVK 324 (775)
Q Consensus 249 ~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~~----gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~ 324 (775)
+.||||+|+|+++|++++. | .+..+++++||+||+++ |++|||||||... .....+++..+++++.+
T Consensus 199 ~~GvAp~A~l~~~kv~~~~--g------~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~-~~~~~~~l~~ai~~a~~ 269 (539)
T 3afg_A 199 YKGMAPGAKLVGIKVLNGQ--G------SGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ-SSDGTDSLSQAVNNAWD 269 (539)
T ss_dssp TCCSCTTCEEEEEECSCTT--S------EEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS-CCCSCSHHHHHHHHHHH
T ss_pred EEEECCCCEEEEEEeecCC--C------CcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC-CCccchHHHHHHHHHHh
Confidence 6899999999999999876 4 46789999999999986 9999999999843 34456889999999999
Q ss_pred CCcEEEEecCCCCCCCCCC--CCCCCceEEecccccccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcC
Q 004077 325 HNILVACSAGNSGPAPSSL--SNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVH 402 (775)
Q Consensus 325 ~Gi~vV~AAGN~G~~~~~~--~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~ 402 (775)
+|++||+||||+|+...+. +...+++|+|||++.
T Consensus 270 ~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~-------------------------------------------- 305 (539)
T 3afg_A 270 AGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK-------------------------------------------- 305 (539)
T ss_dssp TTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT--------------------------------------------
T ss_pred cCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC--------------------------------------------
Confidence 9999999999999865544 345689999998542
Q ss_pred CCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHH
Q 004077 403 QNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHE 482 (775)
Q Consensus 403 ~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~ 482 (775)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEee
Q 004077 483 YIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFS 562 (775)
Q Consensus 483 ~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~s 562 (775)
.+.++.||||||+. ++++||||+|||++|+++++...... +.....|..++
T Consensus 306 -----------------------~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~s 356 (539)
T 3afg_A 306 -----------------------YDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAP 356 (539)
T ss_dssp -----------------------TSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEEC
T ss_pred -----------------------CcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCCC----CCCcccccccC
Confidence 23778999999987 69999999999999999986532110 01113699999
Q ss_pred ccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCccceeccCccccCCCC
Q 004077 563 GTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPG 635 (775)
Q Consensus 563 GTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 635 (775)
|||||||||||++|||+|++|+|++++||++|++||+++...+ .+++.||+|+||+.+|++..
T Consensus 357 GTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 357 GTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG----------CSBTTTBTCBCCHHHHHTGG
T ss_pred chHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC----------CCccCccCCccCHHHHhhhc
Confidence 9999999999999999999999999999999999999875321 25678999999999999854
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.1e-57 Score=505.90 Aligned_cols=344 Identities=25% Similarity=0.327 Sum_probs=272.8
Q ss_pred CCceEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhhcceEEeeceeEeEEEEEcCHHHHHhhcc--ccceEEecC
Q 004077 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSE--EVVSVYPSH 99 (775)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~~~~l~~~~~~~L~~--~V~~V~~~~ 99 (775)
++.+|||.||+.... .+++++. ..+++++|.. +++|+++++.+++++|++ +|++|++++
T Consensus 1 ~~~~~iV~~~~~~~~-----------~~~~~~~-------g~~v~~~~~~-~~~~~~~~~~~~~~~L~~~p~V~~v~~~~ 61 (395)
T 2z2z_A 1 NTIRVIVSVDKAKFN-----------PHEVLGI-------GGHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDH 61 (395)
T ss_dssp CEEEEEEEECTTTCC-----------HHHHHHT-------TCEEEEECSS-SSEEEEEEEGGGHHHHHTSTTEEEEEECC
T ss_pred CcEEEEEEECCCccH-----------HHHHHHc-------CCEEEEEecc-CCEEEEEECHHHHHHHHcCCCceEEEEee
Confidence 357899999986521 2233332 2468899976 999999999999999988 999999999
Q ss_pred CCcccccccCCc-----------cccccchhhhcccCcccccccccccCCCCCc--eEEEEeecCCCCCCCCCCCCCCCC
Q 004077 100 PEKYSLQTTRSW-----------EFVGLDEVAKQNWNHFNMGQDLLSKARYGQD--VIVGLVDNGVWPESKSFSDEGMGP 166 (775)
Q Consensus 100 ~~~~~~~~~~s~-----------~~~gl~~~~~~~~~~~~~~~~~~~~~~~G~G--V~VgVIDtGid~~Hp~f~d~~~~~ 166 (775)
.++++....+ ..|++..+ .. +.+|..+ +|+| |+|||||||||++||+|.++
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~w~~~~i---~~------~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~---- 125 (395)
T 2z2z_A 62 --QAVLLGKPSWLGGGSTQPAQTIPWGIERV---KA------PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---- 125 (395)
T ss_dssp --EEEECCEECC------CCSCCCCHHHHHT---TC------GGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG----
T ss_pred --eecccCCCCcccccccCccccCCcchhhc---CH------HHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc----
Confidence 8776533221 12333322 11 2789988 9999 99999999999999999642
Q ss_pred CCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCC
Q 004077 167 VPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAE 246 (775)
Q Consensus 167 ~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~ 246 (775)
+...++|..+... .+...+.|+.||||||||||+|.. ++
T Consensus 126 -----------------------~~~~~~~~~~~~~--------~~~~~~~d~~gHGT~vAgiia~~~-n~--------- 164 (395)
T 2z2z_A 126 -----------------------IAWCVSTLRGKVS--------TKLRDCADQNGHGTHVIGTIAALN-ND--------- 164 (395)
T ss_dssp -----------------------EEEEEECGGGCCB--------CCHHHHBCSSSHHHHHHHHHHCCC-SS---------
T ss_pred -----------------------cccCccccCCccc--------CCCCCCCCCCCCHHHHHHHHHeec-CC---------
Confidence 3334444332100 001124678999999999999872 11
Q ss_pred cceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHhC--------------------CceEEEEccCCCC
Q 004077 247 GTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRD--------------------GVHVLSISIGTNQ 306 (775)
Q Consensus 247 g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~~--------------------gvdVIn~SlG~~~ 306 (775)
..+.||||+|+|+.+|++++. | .+..+++++||+||+++ +++|||||||...
T Consensus 165 ~g~~GvAp~a~l~~~kv~~~~--g------~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~ 236 (395)
T 2z2z_A 165 IGVVGVAPGVQIYSVRVLDAR--G------SGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA 236 (395)
T ss_dssp SSCCCSSTTCEEEEEECSCTT--S------EEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC
T ss_pred CceEEECCCCEEEEEEEecCC--C------CccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC
Confidence 124699999999999999876 4 46789999999999988 9999999999832
Q ss_pred CCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCceEEecccccccccccceEeCCCcEEeeeeeccCCCCc
Q 004077 307 PFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKK 386 (775)
Q Consensus 307 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 386 (775)
....+..++.++.++|++||+||||+|.....++...|++|+|||++.
T Consensus 237 ----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------------------------- 284 (395)
T 2z2z_A 237 ----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS---------------------------- 284 (395)
T ss_dssp ----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT----------------------------
T ss_pred ----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC----------------------------
Confidence 245677788889999999999999999876667777799999998542
Q ss_pred ceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCcc
Q 004077 387 MHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHY 466 (775)
Q Consensus 387 ~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~ 466 (775)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCC
Q 004077 467 LPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSP 546 (775)
Q Consensus 467 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~ 546 (775)
.+.++.||+||| +|+|||++|+|+++.
T Consensus 285 ---------------------------------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~---- 311 (395)
T 2z2z_A 285 ---------------------------------------NDNIASFSNRQP----------EVSAPGVDILSTYPD---- 311 (395)
T ss_dssp ---------------------------------------TSCBCTTSCSSC----------SEEEECSSEEEEETT----
T ss_pred ---------------------------------------CCCCCcccCCCC----------CEEeCCCCeeeecCC----
Confidence 247789999998 689999999999986
Q ss_pred CcccCCccccccEEeeccCchhhHHHHHHHHHHHhCC-------------CCCHHHHHHHHHhcccccCCCCCcccCCCC
Q 004077 547 SKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHP-------------DWSSAAIRSALMTTAWMKNNKALPITNADG 613 (775)
Q Consensus 547 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-------------~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~ 613 (775)
+.|..++|||||||||||++|||+|++| .|++.+||++|++||+++...|
T Consensus 312 ---------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g-------- 374 (395)
T 2z2z_A 312 ---------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG-------- 374 (395)
T ss_dssp ---------TEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS--------
T ss_pred ---------CceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC--------
Confidence 6899999999999999999999999999 9999999999999999875332
Q ss_pred CCCCCCccceeccCccccCCC
Q 004077 614 SIATPFSFGSGHFRPTKAADP 634 (775)
Q Consensus 614 ~~~~~~~~G~G~vn~~~Al~~ 634 (775)
.+..||+|+||+.+|++.
T Consensus 375 ---~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 375 ---WDADYGYGVVRAALAVQA 392 (395)
T ss_dssp ---SBTTTBTCBCCHHHHHHH
T ss_pred ---CCCCccCceeCHHHHHHH
Confidence 467899999999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=1.5e-55 Score=501.30 Aligned_cols=336 Identities=20% Similarity=0.245 Sum_probs=259.9
Q ss_pred cceEEeeceeEeEEEEEcCHHHHHhhcc---ccceEEecCCCcccccccCCc----------cccccchhhhcccCcccc
Q 004077 63 ASHLYSYKHSINGFSAVLTPDEAARLSE---EVVSVYPSHPEKYSLQTTRSW----------EFVGLDEVAKQNWNHFNM 129 (775)
Q Consensus 63 ~~i~~~y~~~~ng~~~~l~~~~~~~L~~---~V~~V~~~~~~~~~~~~~~s~----------~~~gl~~~~~~~~~~~~~ 129 (775)
.+++++|.. |++|+++++.+++++|++ .|++|++++ .+++...... ..|++..+. ..
T Consensus 66 ~~v~~~~~~-~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~w~l~~i~--~~----- 135 (471)
T 3t41_A 66 LNVVYNIPE-LHVAQIKMTKMHANALANYKNDIKYINATC--STCITSEKTIDRTSNESLFSRQWDMNKIT--NN----- 135 (471)
T ss_dssp CEEEEEEGG-GTEEEEEECHHHHHHHHTCTTTEEEEEECC--SSCBCCCCCCCC---CCSCCCCHHHHTTT--TT-----
T ss_pred CEEEEecCC-ccEEEEEeCHHHHHHHHhcCCCCcEEEecc--eeccccccccccCCCCccccccccHhhcc--Cc-----
Confidence 467888866 999999999999999987 899999999 7776543321 122333220 01
Q ss_pred cccccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCC
Q 004077 130 GQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNA 209 (775)
Q Consensus 130 ~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 209 (775)
..+|..+.+|+||+|||||||||++||+|.+.- |.+. ..++....|.... ...
T Consensus 136 -~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~-------------~~~~~~~~~~~~~------~~~ 188 (471)
T 3t41_A 136 -GASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STDS-------------KNLVPLNGFRGTE------PEE 188 (471)
T ss_dssp -TGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC-------------EECCCTTCGGGCC------TTC
T ss_pred -HHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC-------------cccccCCCccCCC------ccc
Confidence 168999999999999999999999999997541 1110 0111111111110 111
Q ss_pred CCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHH
Q 004077 210 TEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDD 289 (775)
Q Consensus 210 ~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~ 289 (775)
..+...+.|..||||||||||+|+. .+.||||+|+|+++|++++. .+..+++++||+|
T Consensus 189 ~~~~~~~~d~~gHGT~vAgiiaa~g-------------~~~GvAp~a~l~~~kv~~~~---------~~~~~~i~~ai~~ 246 (471)
T 3t41_A 189 TGDVHDVNDRKGHGTMVSGQTSANG-------------KLIGVAPNNKFTMYRVFGSK---------KTELLWVSKAIVQ 246 (471)
T ss_dssp CCCTTCCCCSSSHHHHHHHHHHCBS-------------SSBCSSTTSCEEEEECCSSS---------CCCHHHHHHHHHH
T ss_pred CCCCCCCcCCCCccchhhheeecCC-------------ceeEECCCCeEEEEEeccCC---------CCcHHHHHHHHHH
Confidence 1223456789999999999999862 25799999999999999864 3789999999999
Q ss_pred HHhCCceEEEEccCCCCCCC------------CCccHHHHHHHHHHcCCcEEEEecCCCCCCCCC---------------
Q 004077 290 AIRDGVHVLSISIGTNQPFA------------FNRDGIAIGALNAVKHNILVACSAGNSGPAPSS--------------- 342 (775)
Q Consensus 290 a~~~gvdVIn~SlG~~~~~~------------~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--------------- 342 (775)
|++++++|||||||...... ...+.+..+++.+.++|++||+||||+|.....
T Consensus 247 a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~ 326 (471)
T 3t41_A 247 AANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGE 326 (471)
T ss_dssp HHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSE
T ss_pred HHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCc
Confidence 99999999999999731111 123567788888999999999999999976432
Q ss_pred ---CCCCCCceEEecccccccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCce
Q 004077 343 ---LSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKV 419 (775)
Q Consensus 343 ---~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 419 (775)
.+...+++|+|||++.
T Consensus 327 ~~~~Pa~~~~vitVgA~~~------------------------------------------------------------- 345 (471)
T 3t41_A 327 VKDVPASMDNVVTVGSTDQ------------------------------------------------------------- 345 (471)
T ss_dssp EEEETTTSTTEEEEEEECT-------------------------------------------------------------
T ss_pred eeeccccCCCeEEEEeeCC-------------------------------------------------------------
Confidence 3445688999998542
Q ss_pred eceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceE
Q 004077 420 KGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQART 499 (775)
Q Consensus 420 ~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~ 499 (775)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCCccccccCCCCCCCCCCCCCCceeeCCCc----------------------EEEcccCCCCCCcccCCccccc
Q 004077 500 VLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLN----------------------ILAAWSEASSPSKLAFDKRIVK 557 (775)
Q Consensus 500 ~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~ 557 (775)
.+.++.||+|||+. |||+|||++ |+++++. +.
T Consensus 346 ------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~ 399 (471)
T 3t41_A 346 ------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN-------------GR 399 (471)
T ss_dssp ------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SS
T ss_pred ------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCC-------------CC
Confidence 24788999999963 499999987 8998876 68
Q ss_pred cEEeeccCchhhHHHHHHHHHHHhCC-CCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCccceeccCccccCCCCe
Q 004077 558 YTIFSGTSMSCPHVAAAAALLKAIHP-DWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGL 636 (775)
Q Consensus 558 y~~~sGTSmAaP~VAG~aALl~q~~P-~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 636 (775)
|..++|||||||||||++|||+|++| .++|++||++|++||++... .++..||+|+||+.+|++.+.
T Consensus 400 ~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------~~~~~~G~G~vd~~~Al~~a~ 467 (471)
T 3t41_A 400 YIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------KPFSRYGHGELDVYKALNVAN 467 (471)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC------------CCHHHHTTCBBCHHHHTTTTC
T ss_pred EEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC------------CCcCccccChhCHHHHHHHHH
Confidence 99999999999999999999999999 89999999999999987643 366789999999999998543
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.7e-55 Score=493.69 Aligned_cols=378 Identities=20% Similarity=0.268 Sum_probs=274.0
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|.. +|+||+|||||||||++||+|.+. ++..+++... .
T Consensus 15 ~~w~~--~g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~~~-----------~ 54 (441)
T 1y9z_A 15 VLSDS--QAGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSGT-----------G 54 (441)
T ss_dssp SSCCT--TGGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTTS-----------C
T ss_pred hhhhc--CCCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccCCC-----------C
Confidence 78875 478999999999999999999743 1111111110 1
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCC--eEEEEEeecCCCCCCccCCCCCCHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLA--RLAIYKACWATPKASKAAGNTCFEADMLAAIDD 289 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A--~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~ 289 (775)
+...+.|..||||||||||+|... ...+.||||+| +|+.+|++++. | .+..+++++||+|
T Consensus 55 ~~~~~~d~~gHGT~vAgiia~~~~----------~~g~~GvAP~a~~~l~~~kv~~~~--g------~~~~~~~~~ai~~ 116 (441)
T 1y9z_A 55 NWYQPGNNNAHGTHVAGTIAAIAN----------NEGVVGVMPNQNANIHIVKVFNEA--G------WGYSSSLVAAIDT 116 (441)
T ss_dssp CTTCCCSSCCHHHHHHHHHHCCCS----------SSBCCCSSCSSCSEEEEEECEETT--E------ECCSSCHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHHHhcccC----------CCCceEecCCCCCEEEEEEEeCCC--C------CcCHHHHHHHHHH
Confidence 123567889999999999999731 12357999995 99999999876 4 4678899999999
Q ss_pred HHhC-CceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCceEEecccccccccccceEe
Q 004077 290 AIRD-GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVL 368 (775)
Q Consensus 290 a~~~-gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAs~~~~~~~~~~~~ 368 (775)
|+++ |++|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+.....+...
T Consensus 117 a~~~~g~~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~ 192 (441)
T 1y9z_A 117 CVNSGGANVVTMSLGGSG----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQY 192 (441)
T ss_dssp HHHTTCCSEEEECCCBSC----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCC
T ss_pred HHHhcCCcEEEeCCCCCC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccC
Confidence 9999 9999999999832 2346677888899999999999999998777777777999999999887654443333
Q ss_pred CCCcE-----------------------EeeeeeccCCC---Cccee--eEEecccccCCcCCCCCCCcCCC--CCCCCc
Q 004077 369 GTGME-----------------------IIGKTVTPYNL---KKMHP--LVYAADVVVPGVHQNETNQCLPG--SLTPEK 418 (775)
Q Consensus 369 ~~~~~-----------------------~~g~~~~~~~~---~~~~~--~v~~~~~~~~~~~~~~~~~c~~~--~~~~~~ 418 (775)
+.... +.|.+++.... ...++ +.+..... ..........|... .++..+
T Consensus 193 g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~-~g~~~~~~~~C~~~~~~~~~~~ 271 (441)
T 1y9z_A 193 TDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI-NASATGALAECTVNGTSFSCGN 271 (441)
T ss_dssp CTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC-CCEEEEEEEEEEEETTEEECCC
T ss_pred CCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCcccccccc-ccccccchhccccccccccCCC
Confidence 32211 12222221110 00000 01111100 00001122347643 457789
Q ss_pred eeceEEEEecCCc-----chhhhhhHhhhcCceEEEEecCCCCCCc------cccCCccccEEEEeHHHHHHHHHHHhcC
Q 004077 419 VKGKIVLCMRGSG-----FKLSKGMEVKRAGGVGLILGNSPANGNE------YSYDAHYLPATAVLYDDAIKIHEYIKST 487 (775)
Q Consensus 419 ~~gkivl~~~g~~-----~~~~k~~~~~~~Ga~g~i~~n~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~~~~~~ 487 (775)
++|||++|+|+.+ .+.+|..+++++|+.++|++|+...... .......+|.++++.++|..|++|+...
T Consensus 272 ~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~ 351 (441)
T 1y9z_A 272 MANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS 351 (441)
T ss_dssp CTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE
T ss_pred ccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC
Confidence 9999999999876 7889999999999999999998542211 1223468999999999999998865321
Q ss_pred CCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCch
Q 004077 488 NNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMS 567 (775)
Q Consensus 488 ~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmA 567 (775)
+ .+ ++... +.|..+||||||
T Consensus 352 ----~-----------------------------------t~--------~~~~~-------------~~y~~~sGTSmA 371 (441)
T 1y9z_A 352 ----T-----------------------------------TV--------SNQGN-------------QDYEYYNGTSMA 371 (441)
T ss_dssp ----E-----------------------------------EE--------EEEEE-------------ESEEEECSHHHH
T ss_pred ----c-----------------------------------cc--------ccccC-------------CCceeecccccC
Confidence 0 01 11111 689999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCccceeccCccccCCCCeeeecchhhHHH
Q 004077 568 CPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLL 647 (775)
Q Consensus 568 aP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~ 647 (775)
||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+ ||+.
T Consensus 372 aP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~-----------~~~~ 429 (441)
T 1y9z_A 372 TPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK-----------AYLD 429 (441)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH-----------HHHH
T ss_pred CcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH-----------HHHH
Confidence 99999999999999999999999999999999886543 3567999999999995 6899
Q ss_pred hhhcCCC
Q 004077 648 YLCSHGF 654 (775)
Q Consensus 648 ~~~~~~~ 654 (775)
|||+.++
T Consensus 430 ~lc~~~~ 436 (441)
T 1y9z_A 430 ESCTGPT 436 (441)
T ss_dssp HCTTCC-
T ss_pred hhhcCCC
Confidence 9998865
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=2.4e-53 Score=491.40 Aligned_cols=375 Identities=22% Similarity=0.210 Sum_probs=267.7
Q ss_pred CCceEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhhcceEEeeceeEeEEEEEcCH---HH-HHhhc---c-ccc
Q 004077 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTP---DE-AARLS---E-EVV 93 (775)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~~~~l~~---~~-~~~L~---~-~V~ 93 (775)
...+|||.||+.. ...++++.+ ..++.+++.. +++++++++. ++ +++|+ . +|+
T Consensus 30 ~~~~~IV~~k~~~-----------~~~~~~~~~-------g~~v~~~~~~-i~~~~~~~~~~~~~~~~~~l~~~~~~~V~ 90 (671)
T 1r6v_A 30 TEGKILVGYNDRS-----------EVDKIVKAV-------NGKVVLELPQ-IKVVSIKLNGMTVKQAYDKIKALALKGIR 90 (671)
T ss_dssp CTTEEEEEESSHH-----------HHHHHHHHH-------TCEEEEEEGG-GTEEEEECSSCCHHHHHHHHTTSCCSSEE
T ss_pred CCccEEEEECCCc-----------CHHHHHHhc-------CCeEEEEcCC-CcEEEEEeCCcCHHHHHHHHHhccCCCce
Confidence 4579999999643 112223222 2357777766 8999999865 33 45565 2 999
Q ss_pred eEEecCCCccccccc----CC-----------------------ccccccchhhhcccCcccccccc-cccCCCCCceEE
Q 004077 94 SVYPSHPEKYSLQTT----RS-----------------------WEFVGLDEVAKQNWNHFNMGQDL-LSKARYGQDVIV 145 (775)
Q Consensus 94 ~V~~~~~~~~~~~~~----~s-----------------------~~~~gl~~~~~~~~~~~~~~~~~-~~~~~~G~GV~V 145 (775)
+|||+. .+++... .. ...|++..+ + .+.+ |.. ++|+||+|
T Consensus 91 ~vepd~--~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I---~------~~~a~w~~-~tG~gV~V 158 (671)
T 1r6v_A 91 YVEPSY--KRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAI---G------VTQQLWEE-ASGTNIIV 158 (671)
T ss_dssp EEECCB--CCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHT---T------CCHHHHHH-CSCTTCEE
T ss_pred EEecCe--EEEeccccccCcccccccccccccccccccccccccccCCchhcc---C------Cchhhhhc-cCCCCCEE
Confidence 999998 6554310 00 011222221 1 1256 887 89999999
Q ss_pred EEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCCCCCCCCCCCCcccc
Q 004077 146 GLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTH 225 (775)
Q Consensus 146 gVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTH 225 (775)
||||||||++||+|.++- +.+ ...+.+... ....+..|..|||||
T Consensus 159 AVIDTGVd~~HpdL~~~~-------~~g-------------------~~~~~~~~~---------p~~~d~~d~~gHGTh 203 (671)
T 1r6v_A 159 AVVDTGVDGTHPDLEGQV-------IAG-------------------YRPAFDEEL---------PAGTDSSYGGSAGTH 203 (671)
T ss_dssp EEEESCCBTTSGGGTTTB-------CCE-------------------EEGGGTEEE---------CTTCBCCTTCSHHHH
T ss_pred EEEeCCCCCCCccccccE-------Eec-------------------ccccCCCcC---------CCCCCCccCCCcchh
Confidence 999999999999997531 111 111111000 001134467899999
Q ss_pred chhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecC----CCCCCccCCCCCCHHHHHHHHHHHHhCCceEEEEc
Q 004077 226 TASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWA----TPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSIS 301 (775)
Q Consensus 226 VAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~----~~~g~~~~~~~~~~~~i~~ai~~a~~~gvdVIn~S 301 (775)
|||||||.. ++ ..+.||||+|+|+.+|++++ ...+ ....+.+++||+||+++|++|||||
T Consensus 204 VAGiIAa~~-ng---------~gv~GVAP~A~I~~vkv~~~~~~~~g~g------~~s~~~i~~ai~~A~~~gadVIN~S 267 (671)
T 1r6v_A 204 VAGTIAAKK-DG---------KGIVGVAPGAKIMPIVIFDDPALVGGNG------YVGDDYVAAGIIWATDHGAKVMNHS 267 (671)
T ss_dssp HHHHHHCCC-SS---------SSCCCSCTTSEEEEEESBCCHHHHCTTS------BCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred hhhhhhccC-CC---------CceEEECCCCEEEEEEeccCccccCCCC------ccCHHHHHHHHHHHHHcCCCEEEeC
Confidence 999999873 11 12579999999999999976 1112 3456779999999999999999999
Q ss_pred cCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCC-CCCCCCCCceEEecccccccccccceEeCCCcEEeeeeec
Q 004077 302 IGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-SSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVT 380 (775)
Q Consensus 302 lG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~ 380 (775)
||+.. ....+..++++|.++|++||+||||+|.+. ..++...|++|+|||++.+..
T Consensus 268 lG~~~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~------------------- 324 (671)
T 1r6v_A 268 WGGWG----YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG------------------- 324 (671)
T ss_dssp EEBSC----CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-------------------
T ss_pred CCCCC----CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC-------------------
Confidence 99832 346778888999999999999999999764 344556689999998643110
Q ss_pred cCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCcc
Q 004077 381 PYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEY 460 (775)
Q Consensus 381 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~ 460 (775)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcc
Q 004077 461 SYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAW 540 (775)
Q Consensus 461 ~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~ 540 (775)
...++.||++||.. ||+|||++|++++
T Consensus 325 ---------------------------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~ 351 (671)
T 1r6v_A 325 ---------------------------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTV 351 (671)
T ss_dssp ---------------------------------------------EEEECSSSCCCTTE--------EEEEECSSEEEEC
T ss_pred ---------------------------------------------ceeeccccCCCCCe--------eEEecCCCEEeec
Confidence 01478999999976 9999999999998
Q ss_pred cCCCCCCc-----ccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCcccCCCCCC
Q 004077 541 SEASSPSK-----LAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNADGSI 615 (775)
Q Consensus 541 ~~~~~~~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 615 (775)
+....... .......+.|..++|||||||||||++|||+|++|++++++||++|++||+++...|
T Consensus 352 p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g---------- 421 (671)
T 1r6v_A 352 PGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG---------- 421 (671)
T ss_dssp CCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS----------
T ss_pred CCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC----------
Confidence 76321100 001112357999999999999999999999999999999999999999999875432
Q ss_pred CCCCccceeccCccccCCCCeeeecchhhH
Q 004077 616 ATPFSFGSGHFRPTKAADPGLVYDASYEDY 645 (775)
Q Consensus 616 ~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~ 645 (775)
.+..+|+|+||+.+|++..|..+....+|
T Consensus 422 -~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 422 -WDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp -CBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred -CCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 45689999999999999877665444343
No 9
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1e-55 Score=507.73 Aligned_cols=337 Identities=21% Similarity=0.214 Sum_probs=54.0
Q ss_pred eEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhhcceEEeeceeEeEEEEEcCHHHHHhhcc--ccceEEecCCCc
Q 004077 25 VYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSE--EVVSVYPSHPEK 102 (775)
Q Consensus 25 ~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~~~~l~~~~~~~L~~--~V~~V~~~~~~~ 102 (775)
+|||+||++... ...+.+.+.+.....+.. ...++++.|+++|+||+++++.+++++|++ +|++|++++ .
T Consensus 77 ~YIV~lk~~~~~-----~~~~~~~~~l~a~~~~~g-~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~--~ 148 (692)
T 2p4e_P 77 TYVVVLKEETHL-----SQSERTARRLQAQAARRG-YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDS--S 148 (692)
T ss_dssp EEEEEECTTCCH-----HHHHHHHHHHHHHHHHTT-CCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEE--E
T ss_pred cEEEEECCCCCH-----HHHHHHHHHHHHHHhhcc-cccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEecc--c
Confidence 899999988732 223334444443322111 124689999999999999999999999999 999999999 7
Q ss_pred ccccccCCccccccchhhhcc-cCcccccccccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCcc
Q 004077 103 YSLQTTRSWEFVGLDEVAKQN-WNHFNMGQDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAF 181 (775)
Q Consensus 103 ~~~~~~~s~~~~gl~~~~~~~-~~~~~~~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~ 181 (775)
+..+ ... |++..+.... .. ..|..+.+|+||+|||||||||++||+|.+... |. +|
T Consensus 149 v~~~-~~p---WgL~~i~~~~~~~------~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~ 205 (692)
T 2p4e_P 149 VFAQ-SIP---WNLERITPPRYRA------DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------DF 205 (692)
T ss_dssp EEEC----------------------------------------------------------------------------
T ss_pred cccC-CCC---cchhhcccccccc------cccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------cc
Confidence 7542 222 4665542211 11 468888999999999999999999999975410 10 01
Q ss_pred CcccccceeeeeeecccccccccCCCCCCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEE
Q 004077 182 NSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIY 261 (775)
Q Consensus 182 ~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~ 261 (775)
+ .+.+.. + ......+.|..||||||||||+|+. .||||+|+|+++
T Consensus 206 ~------------~~~d~d----g----~~~~~~~~D~~GHGTHVAGiIAg~~---------------~GVAP~A~L~~v 250 (692)
T 2p4e_P 206 E------------NVPEED----G----TRFHRQASKCDSHGTHLAGVVSGRD---------------AGVAKGASMRSL 250 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c------------cccCCC----C----CcccCCCCCCCCcHHHhhhHhhcCC---------------CccCCCCEEEEE
Confidence 0 000000 0 0001246789999999999999862 499999999999
Q ss_pred EeecCCCCCCccCCCCCCHHHHHHHHHHHHhC------CceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCC
Q 004077 262 KACWATPKASKAAGNTCFEADMLAAIDDAIRD------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGN 335 (775)
Q Consensus 262 kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN 335 (775)
||+++. | .++.+++++||+|++++ +++|||||||+. ....+..+++++.++|++||+||||
T Consensus 251 KVl~~~--G------~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~-----~s~~l~~Ai~~A~~~GVlvVaAAGN 317 (692)
T 2p4e_P 251 RVLNCQ--G------KGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG-----YSRVLNAACQRLARAGVVLVTAAGN 317 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeecCC--C------CCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCC-----CcHHHHHHHHHHHHCCCEEEEECCC
Confidence 999876 4 46788999999999986 899999999982 2345666778889999999999999
Q ss_pred CCCCCCCC-CCCCCceEEecccccccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCC
Q 004077 336 SGPAPSSL-SNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSL 414 (775)
Q Consensus 336 ~G~~~~~~-~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~ 414 (775)
+|.+.... +...|++|+|||++.+...
T Consensus 318 ~G~~~~~~sPA~~~~vItVGA~d~~~~~---------------------------------------------------- 345 (692)
T 2p4e_P 318 FRDDACLYSPASAPEVITVGATNAQDQP---------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCccCcccCCCEEEEEEEcCCCCc----------------------------------------------------
Confidence 99764333 4566999999997532100
Q ss_pred CCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEE
Q 004077 415 TPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAII 494 (775)
Q Consensus 415 ~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i 494 (775)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeceEEeecCCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHH
Q 004077 495 KQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAA 574 (775)
Q Consensus 495 ~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~ 574 (775)
...-+.||+|||. |||+|||++|+++++... ..|..++|||||||||||+
T Consensus 346 -----------a~~ss~fSn~G~~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~ 395 (692)
T 2p4e_P 346 -----------VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGI 395 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------cccccccCCCCCc--------eeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHH
Confidence 0001238999984 499999999999987621 4789999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHhcccccC
Q 004077 575 AALLKAIHPDWSSAAIRSALMTTAWMKN 602 (775)
Q Consensus 575 aALl~q~~P~~s~~~ik~~L~~TA~~~~ 602 (775)
+|||+|++|+|+|++||++|++||.+..
T Consensus 396 aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 396 AAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp ----------------------------
T ss_pred HHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 9999999999999999999999998653
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.1e-51 Score=436.24 Aligned_cols=258 Identities=26% Similarity=0.334 Sum_probs=211.3
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+..|+||+|||||||||++||+|.+. ++..++|.++
T Consensus 22 ~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------------~~~~~~~~~~------------ 62 (280)
T 1dbi_A 22 YAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------------VIKGYDFVDN------------ 62 (280)
T ss_dssp HHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------------EEEEEETTTT------------
T ss_pred HHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------------cccceeccCC------------
Confidence 8899988888999999999999999999642 3444555432
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
...+.|..||||||||||+|...+. ..+.||||+|+|+.+|+++.. | .+..+++++||+||+
T Consensus 63 -~~~~~d~~gHGT~vAgiia~~~~~~---------~g~~GvAp~a~l~~~kv~~~~--g------~~~~~~i~~ai~~a~ 124 (280)
T 1dbi_A 63 -DYDPMDLNNHGTHVAGIAAAETNNA---------TGIAGMAPNTRILAVRALDRN--G------SGTLSDIADAIIYAA 124 (280)
T ss_dssp -BSCCCCSSSHHHHHHHHHHCCCSSS---------SSCCCSSSSCEEEEEECCCTT--S------CCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCcHHHHHHHHhCcCCCC---------CcceEeCCCCEEEEEEEECCC--C------CcCHHHHHHHHHHHH
Confidence 1245788999999999999974322 235699999999999999876 4 468899999999999
Q ss_pred hCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCceEEecccccccccccceEeCCC
Q 004077 292 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTG 371 (775)
Q Consensus 292 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~ 371 (775)
++|++|||||||... ....+..+++++.++|++||+||||+|......+...+++|+|||++.
T Consensus 125 ~~g~~Vin~S~G~~~----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 187 (280)
T 1dbi_A 125 DSGAEVINLSLGCDC----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ------------- 187 (280)
T ss_dssp HTTCSEEEECCSSCC----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-------------
T ss_pred HCCCCEEEeCCCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-------------
Confidence 999999999999832 346778888899999999999999999766566667799999998542
Q ss_pred cEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEe
Q 004077 372 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 451 (775)
Q Consensus 372 ~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~ 451 (775)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceee
Q 004077 452 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 531 (775)
Q Consensus 452 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~A 531 (775)
.+.++.||++||.. ||+|
T Consensus 188 ------------------------------------------------------~~~~~~~S~~G~~~--------dv~A 205 (280)
T 1dbi_A 188 ------------------------------------------------------YDRLASFSNYGTWV--------DVVA 205 (280)
T ss_dssp ------------------------------------------------------TSCBCTTBCCSTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCCCCCCCCc--------eEEE
Confidence 24678999999865 9999
Q ss_pred CCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCcccCC
Q 004077 532 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNA 611 (775)
Q Consensus 532 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 611 (775)
||++|+++++. +.|..++|||||||||||++|||++ |.+++++||++|++||+++..
T Consensus 206 pG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------- 262 (280)
T 1dbi_A 206 PGVDIVSTITG-------------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------- 262 (280)
T ss_dssp ECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT--------
T ss_pred ecCCeEeecCC-------------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC--------
Confidence 99999999876 6899999999999999999999987 899999999999999998753
Q ss_pred CCCCCCCCccceeccCccccCC
Q 004077 612 DGSIATPFSFGSGHFRPTKAAD 633 (775)
Q Consensus 612 ~~~~~~~~~~G~G~vn~~~Al~ 633 (775)
....||+|+||+.+|++
T Consensus 263 -----~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 -----TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----BTTTBSSEECCHHHHHT
T ss_pred -----CCCcccCCEECHHHHhc
Confidence 23569999999999986
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=5e-52 Score=437.71 Aligned_cols=256 Identities=28% Similarity=0.436 Sum_probs=214.4
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|+|||||||++||+|+ +...++|..+
T Consensus 15 ~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~------------ 53 (274)
T 1r0r_E 15 KVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAG------------ 53 (274)
T ss_dssp HHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTT------------
T ss_pred HHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCC------------
Confidence 78999999999999999999999999994 1223334322
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
...+.|..||||||||||+|.. + ...+.||||+|+|+.+|+++.. + .+..+++++||+||+
T Consensus 54 -~~~~~d~~gHGT~vAgiia~~~-~---------~~g~~GvAp~a~l~~~~v~~~~--g------~~~~~~i~~ai~~a~ 114 (274)
T 1r0r_E 54 -EAYNTDGNGHGTHVAGTVAALD-N---------TTGVLGVAPSVSLYAVKVLNSS--G------SGSYSGIVSGIEWAT 114 (274)
T ss_dssp -CCTTCCSSSHHHHHHHHHHCCS-S---------SSBCCCSSTTSEEEEEECSCTT--S------EECHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCHHHHHHHHHccC-C---------CCceEEECCCCEEEEEEEECCC--C------CccHHHHHHHHHHHH
Confidence 1135678999999999999862 1 1125799999999999999876 4 467889999999999
Q ss_pred hCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCC----CCCCCCCCceEEecccccccccccceE
Q 004077 292 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP----SSLSNLAPWLITVGAGSLDRDFVGPVV 367 (775)
Q Consensus 292 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgAs~~~~~~~~~~~ 367 (775)
+++++|||||||... ....+..+++++.++|++||+||||+|... ..++...+++|+|||++.
T Consensus 115 ~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--------- 181 (274)
T 1r0r_E 115 TNGMDVINMSLGGAS----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS--------- 181 (274)
T ss_dssp HTTCSEEEECEEBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT---------
T ss_pred HcCCCEEEeCCCCCC----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC---------
Confidence 999999999999832 246778888999999999999999999753 223445689999998542
Q ss_pred eCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceE
Q 004077 368 LGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVG 447 (775)
Q Consensus 368 ~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g 447 (775)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCC
Q 004077 448 LILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKP 527 (775)
Q Consensus 448 ~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KP 527 (775)
.+.++.||++||.+
T Consensus 182 ----------------------------------------------------------~~~~~~~S~~G~~~-------- 195 (274)
T 1r0r_E 182 ----------------------------------------------------------NSNRASFSSVGAEL-------- 195 (274)
T ss_dssp ----------------------------------------------------------TSCBCTTCCCSTTE--------
T ss_pred ----------------------------------------------------------CCCcCccCCCCCCc--------
Confidence 24678999999954
Q ss_pred ceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCc
Q 004077 528 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALP 607 (775)
Q Consensus 528 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~ 607 (775)
||+|||++|+++++. +.|..++|||||||||||++|||+|++|.+++++||++|++||+++.
T Consensus 196 di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----- 257 (274)
T 1r0r_E 196 EVMAPGAGVYSTYPT-------------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG----- 257 (274)
T ss_dssp EEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS-----
T ss_pred eEEeCCCCeEeecCC-------------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC-----
Confidence 999999999999876 68999999999999999999999999999999999999999999763
Q ss_pred ccCCCCCCCCCCccceeccCccccCC
Q 004077 608 ITNADGSIATPFSFGSGHFRPTKAAD 633 (775)
Q Consensus 608 ~~~~~~~~~~~~~~G~G~vn~~~Al~ 633 (775)
++..||+|+||+.+|++
T Consensus 258 ---------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 ---------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp ---------CHHHHTTCBCCHHHHTC
T ss_pred ---------CCCCcccCccCHHHHhC
Confidence 35679999999999985
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=7.6e-52 Score=434.61 Aligned_cols=255 Identities=30% Similarity=0.438 Sum_probs=216.3
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 15 ~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~------------ 52 (269)
T 1gci_A 15 AAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPG------------ 52 (269)
T ss_dssp HHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTT------------
T ss_pred HHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCC------------
Confidence 789999999999999999999 8999994 1223334322
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
...+.|..||||||||||+|.. + ...+.||||+|+|+.+|+++.. + .+..+++++||+|++
T Consensus 53 -~~~~~d~~gHGT~vAgiia~~~-~---------~~~~~GvAp~a~l~~~~v~~~~--g------~~~~~~~~~ai~~a~ 113 (269)
T 1gci_A 53 -EPSTQDGNGHGTHVAGTIAALN-N---------SIGVLGVAPSAELYAVKVLGAS--G------SGSVSSIAQGLEWAG 113 (269)
T ss_dssp -CCSCSCSSSHHHHHHHHHHCCC-S---------SSBCCCSSTTCEEEEEECBCTT--S------CBCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCChHHHHHHHhcCc-C---------CCCcEEeCCCCEEEEEEeECCC--C------CcCHHHHHHHHHHHH
Confidence 1235688999999999999862 1 1125799999999999999876 4 468899999999999
Q ss_pred hCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCceEEecccccccccccceEeCCC
Q 004077 292 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTG 371 (775)
Q Consensus 292 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~ 371 (775)
+++++|||||||... ....+..+++++.++|++||+||||+|.....++...+++|+|||++.
T Consensus 114 ~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 176 (269)
T 1gci_A 114 NNGMHVANLSLGSPS----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------- 176 (269)
T ss_dssp HTTCSEEEECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------
T ss_pred HCCCeEEEeCCCCCC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-------------
Confidence 999999999999832 245778888899999999999999999876666667799999998542
Q ss_pred cEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEe
Q 004077 372 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 451 (775)
Q Consensus 372 ~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~ 451 (775)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceee
Q 004077 452 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 531 (775)
Q Consensus 452 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~A 531 (775)
.+.++.||++||.+ ||+|
T Consensus 177 ------------------------------------------------------~~~~~~~S~~G~~~--------di~A 194 (269)
T 1gci_A 177 ------------------------------------------------------NNNRASFSQYGAGL--------DIVA 194 (269)
T ss_dssp ------------------------------------------------------TSCBCTTCCCSTTE--------EEEE
T ss_pred ------------------------------------------------------CCCCCCCCCCCCCc--------ceEe
Confidence 24678999999975 9999
Q ss_pred CCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCcccCC
Q 004077 532 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNA 611 (775)
Q Consensus 532 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 611 (775)
||++|+++++. +.|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 195 PG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------- 252 (269)
T 1gci_A 195 PGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------- 252 (269)
T ss_dssp ECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------
T ss_pred cCCCeEeecCC-------------CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------
Confidence 99999999876 68999999999999999999999999999999999999999999763
Q ss_pred CCCCCCCCccceeccCccccCC
Q 004077 612 DGSIATPFSFGSGHFRPTKAAD 633 (775)
Q Consensus 612 ~~~~~~~~~~G~G~vn~~~Al~ 633 (775)
+++.||+|+||+.+|++
T Consensus 253 -----~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 -----STNLYGSGLVNAEAATR 269 (269)
T ss_dssp -----CHHHHTTCBCCHHHHTC
T ss_pred -----CCCCcccCccCHHHHcC
Confidence 35679999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=1.3e-51 Score=435.93 Aligned_cols=258 Identities=30% Similarity=0.433 Sum_probs=215.0
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||+|+. ...++|..+
T Consensus 15 ~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~------------ 53 (281)
T 1to2_E 15 ALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPS------------ 53 (281)
T ss_dssp HHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTT------------
T ss_pred HHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCC------------
Confidence 789999999999999999999999999941 122333221
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
+.....|..||||||||||+|.. + ...+.||||+|+|+.+|+++.. + .+..++++++|+|++
T Consensus 54 ~~~~~~d~~gHGT~vAgiia~~~-~---------~~g~~GvAp~a~l~~~kv~~~~--g------~~~~~~i~~ai~~a~ 115 (281)
T 1to2_E 54 ETNPFQDNNSHGTHVAGTVAALN-N---------SIGVLGVAPSASLYAVKVLGAD--G------SGQYSWIINGIEWAI 115 (281)
T ss_dssp CCCTTCCSSSHHHHHHHHHHCCS-S---------SSSBCCSSTTSEEEEEECSCTT--S------EECHHHHHHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHHHhccC-C---------CCcceeeCCCCEEEEEEEeCCC--C------CccHHHHHHHHHHHH
Confidence 11123578999999999999862 1 1125799999999999999876 4 467899999999999
Q ss_pred hCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCC----CCCCCCCCceEEecccccccccccceE
Q 004077 292 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP----SSLSNLAPWLITVGAGSLDRDFVGPVV 367 (775)
Q Consensus 292 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgAs~~~~~~~~~~~ 367 (775)
+++++|||||||... ....+..+++++.++|++||+||||+|... ..++...|++|+|||++.
T Consensus 116 ~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--------- 182 (281)
T 1to2_E 116 ANNMDVINMSLGGPS----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS--------- 182 (281)
T ss_dssp HTTCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT---------
T ss_pred HCCCcEEEECCcCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC---------
Confidence 999999999999832 246788888999999999999999999752 233445589999998542
Q ss_pred eCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceE
Q 004077 368 LGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVG 447 (775)
Q Consensus 368 ~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g 447 (775)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCC
Q 004077 448 LILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKP 527 (775)
Q Consensus 448 ~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KP 527 (775)
.+.++.||++||..
T Consensus 183 ----------------------------------------------------------~~~~~~fS~~G~~~-------- 196 (281)
T 1to2_E 183 ----------------------------------------------------------SNQRASFSSVGPEL-------- 196 (281)
T ss_dssp ----------------------------------------------------------TSCBCTTCCCSTTC--------
T ss_pred ----------------------------------------------------------CCCcCCcCCCCCCc--------
Confidence 24678999999965
Q ss_pred ceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCc
Q 004077 528 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALP 607 (775)
Q Consensus 528 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~ 607 (775)
||+|||++|+++++. +.|..++|||||||||||++|||+|++|.|++++||++|++||+++.
T Consensus 197 di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----- 258 (281)
T 1to2_E 197 DVMAPGVSIQSTLPG-------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG----- 258 (281)
T ss_dssp CEEEECSSEEEEETT-------------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS-----
T ss_pred eEEecCCCeEeecCC-------------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC-----
Confidence 999999999999876 68999999999999999999999999999999999999999999763
Q ss_pred ccCCCCCCCCCCccceeccCccccCCC
Q 004077 608 ITNADGSIATPFSFGSGHFRPTKAADP 634 (775)
Q Consensus 608 ~~~~~~~~~~~~~~G~G~vn~~~Al~~ 634 (775)
+++.||+|+||+.+|++.
T Consensus 259 ---------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 ---------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp ---------CHHHHTTCBCCHHHHTSS
T ss_pred ---------CCCCcccceecHHHHhhh
Confidence 356799999999999985
No 14
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=2.3e-53 Score=464.64 Aligned_cols=308 Identities=19% Similarity=0.230 Sum_probs=197.9
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCccccccee----eeeeecccccccccCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKI----IGARYYLKGFEQLYGPL 207 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~ki----ig~~~~~~~~~~~~~~~ 207 (775)
++|..+..|++|+|||||||||++||+|++..+.+....|+..++....... ..+..+ ...+.+......
T Consensus 22 ~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----- 95 (357)
T 4h6x_A 22 DLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDY-AAFQSIRDQGLKGKEKEEALEA----- 95 (357)
T ss_dssp HHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHH-HHHHHHHHHTCCSHHHHHHHHH-----
T ss_pred HHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccc-cccccccCcccccccccccccc-----
Confidence 7899999999999999999999999999887665666667654432110000 000000 000000000000
Q ss_pred CCCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHH
Q 004077 208 NATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAI 287 (775)
Q Consensus 208 ~~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai 287 (775)
...+..++.|.+||||||||||||+.. ..+.||||+|+|+.+|++.... + ..+..+...+++++|
T Consensus 96 -~~~~~~~~~D~~gHGThVAGiiag~~~-----------~g~~GvAp~a~l~~~k~~~~~~-~--~~~~~~~~~~~~~ai 160 (357)
T 4h6x_A 96 -VIPDTKDRIVLNDHACHVTSTIVGQEH-----------SPVFGIAPNCRVINMPQDAVIR-G--NYDDVMSPLNLARAI 160 (357)
T ss_dssp -HCTTTHHHHHHHHHHHHHHHHHHCCTT-----------SSCCCSCTTSEEEEEECTTC-------------CHHHHHHH
T ss_pred -ccCCCCCCcCCCCcHHHHHHHHhccCC-----------CCceEeeccceEEeeeecccCC-C--CccccccHHHHHHHH
Confidence 001122455778999999999998731 1357999999999999975431 1 011134567789999
Q ss_pred HHHHhCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCceEEecccccccccccceE
Q 004077 288 DDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVV 367 (775)
Q Consensus 288 ~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAs~~~~~~~~~~~ 367 (775)
+||++.|++|||||||.........+.+..++.++.++|++||+||||+|.....++...|++|+|||++.
T Consensus 161 ~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--------- 231 (357)
T 4h6x_A 161 DLALELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV--------- 231 (357)
T ss_dssp HHHHHTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT---------
T ss_pred HHHHHcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc---------
Confidence 99999999999999998544455667888888999999999999999999776666677799999998542
Q ss_pred eCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceE
Q 004077 368 LGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVG 447 (775)
Q Consensus 368 ~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g 447 (775)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCC
Q 004077 448 LILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKP 527 (775)
Q Consensus 448 ~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KP 527 (775)
.+.++.|||||+. ..||
T Consensus 232 ----------------------------------------------------------~~~~~~fSn~G~~-----~~~~ 248 (357)
T 4h6x_A 232 ----------------------------------------------------------DGTPCHFSNWGGN-----NTKE 248 (357)
T ss_dssp ----------------------------------------------------------TSSBCTTCC---C-----TTTT
T ss_pred ----------------------------------------------------------CCcccccccCCCC-----CCcc
Confidence 3478899999974 4589
Q ss_pred ceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHh----CCCCCHHHHHHHHHhcccccCC
Q 004077 528 DITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI----HPDWSSAAIRSALMTTAWMKNN 603 (775)
Q Consensus 528 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~~s~~~ik~~L~~TA~~~~~ 603 (775)
||+|||++|+++++.. +.|..++|||||||||||++|||+++ +|.|++++||++|++||++++.
T Consensus 249 di~APG~~i~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~ 316 (357)
T 4h6x_A 249 GILAPGEEILGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDP 316 (357)
T ss_dssp EEEEECSSEEECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC------
T ss_pred ceeecCCCeEeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCC
Confidence 9999999999998762 46778999999999999999999964 5689999999999999998754
Q ss_pred CCCcccCCCCCCCCCCccceeccCccccCC
Q 004077 604 KALPITNADGSIATPFSFGSGHFRPTKAAD 633 (775)
Q Consensus 604 ~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 633 (775)
. ....+.+||+|+||+.+|++
T Consensus 317 ~---------~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 317 E---------VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp -----------------CTTCBCCHHHHHH
T ss_pred C---------CCCCcccceeEEecHHHHHH
Confidence 2 12356789999999999987
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2.9e-51 Score=442.34 Aligned_cols=264 Identities=27% Similarity=0.387 Sum_probs=214.3
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||+|.+ +++..++|..++..
T Consensus 32 ~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~~--------- 75 (327)
T 2x8j_A 32 AVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTDYGG--------- 75 (327)
T ss_dssp HHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSGGGG---------
T ss_pred HHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCCCCC---------
Confidence 899999999999999999999999999963 24455555544211
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
+.....|..||||||||||+|+. ++ ..+.||||+|+|+.+|+++.. | .+..+++++||+||+
T Consensus 76 ~~~~~~d~~gHGT~VAgiia~~~-~~---------~g~~GvAp~a~l~~~kv~~~~--g------~~~~~~i~~ai~~a~ 137 (327)
T 2x8j_A 76 DETNFSDNNGHGTHVAGTVAAAE-TG---------SGVVGVAPKADLFIIKALSGD--G------SGEMGWIAKAIRYAV 137 (327)
T ss_dssp CTTCCCCSSSHHHHHHHHHHCCC-CS---------SBCCCSSTTCEEEEEECSCTT--S------EECHHHHHHHHHHHH
T ss_pred CCCCCCCCCCchHHHHHHHhccC-CC---------CCcEeeCCCCEEEEEEeECCC--C------CcCHHHHHHHHHHHH
Confidence 11235688999999999999872 11 125799999999999999876 4 467899999999999
Q ss_pred h------CCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCC-----CCCCCCCCceEEeccccccc
Q 004077 292 R------DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-----SSLSNLAPWLITVGAGSLDR 360 (775)
Q Consensus 292 ~------~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~vitVgAs~~~~ 360 (775)
+ .+++|||||||... ....+..+++++.++|++||+||||+|... ..++...+++|+|||++.
T Consensus 138 ~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~-- 211 (327)
T 2x8j_A 138 DWRGPKGEQMRIITMSLGGPT----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF-- 211 (327)
T ss_dssp HCCCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT--
T ss_pred hhcccccCCceEEEECCCcCC----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC--
Confidence 9 89999999999832 246677888899999999999999999652 233445689999998542
Q ss_pred ccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHh
Q 004077 361 DFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEV 440 (775)
Q Consensus 361 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~ 440 (775)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCC
Q 004077 441 KRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNAL 520 (775)
Q Consensus 441 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~ 520 (775)
.+.++.||++||.+
T Consensus 212 -----------------------------------------------------------------~~~~~~fS~~G~~~- 225 (327)
T 2x8j_A 212 -----------------------------------------------------------------DLRLSDFTNTNEEI- 225 (327)
T ss_dssp -----------------------------------------------------------------TCCBSCC---CCCC-
T ss_pred -----------------------------------------------------------------CCCCCCccCCCCCc-
Confidence 24778999999854
Q ss_pred CCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHh-----CCCCCHHHHHHHHH
Q 004077 521 DPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI-----HPDWSSAAIRSALM 595 (775)
Q Consensus 521 ~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~P~~s~~~ik~~L~ 595 (775)
||+|||++|+++++. +.|..++|||||||+|||++|||+|+ +|.+++.+||++|+
T Consensus 226 -------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~ 285 (327)
T 2x8j_A 226 -------DIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLV 285 (327)
T ss_dssp -------SEEEECSSEEEECST-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred -------eEecCcCceEeecCC-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHH
Confidence 999999999999876 68999999999999999999999999 99999999999999
Q ss_pred hcccccCCCCCcccCCCCCCCCCCccceeccCccccCCC
Q 004077 596 TTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 634 (775)
Q Consensus 596 ~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 634 (775)
+||++... ++..+|+|+||+.+|++.
T Consensus 286 ~tA~~~g~-------------~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 286 RRATPIGF-------------TAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp TTEECCSS-------------CHHHHTTCEECTTHHHHH
T ss_pred HhCccCCC-------------CCCceeeeEECHHHHHHh
Confidence 99997641 467899999999999873
No 16
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=8.9e-51 Score=429.28 Aligned_cols=257 Identities=26% Similarity=0.372 Sum_probs=216.5
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|... +|+||+|||||||||++||+|.+ +++..++|.++
T Consensus 22 ~aw~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~------------ 61 (279)
T 1thm_A 22 QAWDIA-EGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVDN------------ 61 (279)
T ss_dssp HHHTTC-CCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTTT------------
T ss_pred HHHhcC-CCCCCEEEEEccCCCCCCcchhc---------------------------CccccccccCC------------
Confidence 788876 79999999999999999999964 23444555442
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
...+.|..||||||||||+|...++ ..+.||||+|+|+.+|+++.. | .+..+++++||+||+
T Consensus 62 -~~~~~d~~gHGT~vAgiia~~~~n~---------~g~~GvAp~a~l~~~~v~~~~--g------~~~~~~~~~ai~~a~ 123 (279)
T 1thm_A 62 -DSTPQNGNGHGTHCAGIAAAVTNNS---------TGIAGTAPKASILAVRVLDNS--G------SGTWTAVANGITYAA 123 (279)
T ss_dssp -BSCCCCSSSHHHHHHHHHHCCCSSS---------SSCCCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCcHHHHHHHHhCccCCC---------CccEEeCCCCEEEEEEeeCCC--C------CccHHHHHHHHHHHH
Confidence 1245788999999999999974322 235699999999999999876 4 467889999999999
Q ss_pred hCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCceEEecccccccccccceEeCCC
Q 004077 292 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTG 371 (775)
Q Consensus 292 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~ 371 (775)
++|++|||||||... ....+..+++++.++|++||+||||+|.....++...+++|+|||++.
T Consensus 124 ~~g~~Vin~S~G~~~----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 186 (279)
T 1thm_A 124 DQGAKVISLSLGGTV----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------- 186 (279)
T ss_dssp HTTCSEEEECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-------------
T ss_pred HCCCCEEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-------------
Confidence 999999999999832 346778888899999999999999999876666777799999998542
Q ss_pred cEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEe
Q 004077 372 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 451 (775)
Q Consensus 372 ~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~ 451 (775)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceee
Q 004077 452 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 531 (775)
Q Consensus 452 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~A 531 (775)
.+.++.||++||.+ ||+|
T Consensus 187 ------------------------------------------------------~~~~~~fS~~G~~~--------dv~A 204 (279)
T 1thm_A 187 ------------------------------------------------------NDNKSSFSTYGSWV--------DVAA 204 (279)
T ss_dssp ------------------------------------------------------TSCBCTTCCCCTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCcCCCCCce--------EEEE
Confidence 24678999999865 9999
Q ss_pred CCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCcccCC
Q 004077 532 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITNA 611 (775)
Q Consensus 532 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 611 (775)
||++|+++++. +.|..++|||||||||||++||| ++|.+++++||++|++||+++...
T Consensus 205 PG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~------- 262 (279)
T 1thm_A 205 PGSSIYSTYPT-------------STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT------- 262 (279)
T ss_dssp ECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-------
T ss_pred cCCCeEEEeCC-------------CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-------
Confidence 99999999976 68999999999999999999999 589999999999999999987643
Q ss_pred CCCCCCCCccceeccCccccCC
Q 004077 612 DGSIATPFSFGSGHFRPTKAAD 633 (775)
Q Consensus 612 ~~~~~~~~~~G~G~vn~~~Al~ 633 (775)
...||+|+||+.+|++
T Consensus 263 ------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 ------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ------TTTBSSEECCHHHHHH
T ss_pred ------CccccCCeeCHHHHhc
Confidence 2468999999999975
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=2.2e-51 Score=435.41 Aligned_cols=267 Identities=24% Similarity=0.269 Sum_probs=211.5
Q ss_pred CCCC-CceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCCCCCC
Q 004077 137 ARYG-QDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATEDDRS 215 (775)
Q Consensus 137 ~~~G-~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~ 215 (775)
.++| +||+|||||||||++||+|.+.. +..+.+... .....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~---------------------------~~~~~~~~~-----------~~~~~ 44 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD---------------------------LTVLPTLAP-----------TAARS 44 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE---------------------------EEECCCSSC-----------CCCCT
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe---------------------------eecCcCCCC-----------CCCCC
Confidence 4678 79999999999999999997431 111111111 01122
Q ss_pred CCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHhCCc
Q 004077 216 PRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGV 295 (775)
Q Consensus 216 ~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~~gv 295 (775)
..|..||||||||||+|+.. ..+.||||+|+|+.+|++.+... .....++++||+||+++++
T Consensus 45 d~~~~gHGT~VAGiiag~~~-----------~~~~GvAp~a~l~~~kv~~~~~~-------~~~~~~i~~ai~~a~~~~~ 106 (282)
T 3zxy_A 45 DGFMSAHGTHVASIIFGQPE-----------TSVPGIAPQCRGLIVPIFSDDRR-------RITQLDLARGIERAVNAGA 106 (282)
T ss_dssp TCHHHHHHHHHHHHHHCCTT-----------SSSCCSSTTSEEEEEECSCSSSS-------CCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCcccceeehhhccCC-----------ceeeeeccccceEeeEeeccccc-------cchHHHHHHHHHHhhccCC
Confidence 33567999999999998731 13579999999999999876532 3678889999999999999
Q ss_pred eEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCceEEecccccccccccceEeCCCcEEe
Q 004077 296 HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEII 375 (775)
Q Consensus 296 dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~ 375 (775)
+|||||||...........+..++..+.++|+++|+||||+|......+...+++|+|||++.
T Consensus 107 ~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~----------------- 169 (282)
T 3zxy_A 107 HIINISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD----------------- 169 (282)
T ss_dssp SEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT-----------------
T ss_pred eEEeccCccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC-----------------
Confidence 999999997433344456678888899999999999999999776666667799999998542
Q ss_pred eeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEecCCC
Q 004077 376 GKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPA 455 (775)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~ 455 (775)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceeeCCCc
Q 004077 456 NGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLN 535 (775)
Q Consensus 456 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~ 535 (775)
.+.++.||+||+. ..||||+|||.+
T Consensus 170 --------------------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~ 194 (282)
T 3zxy_A 170 --------------------------------------------------HGHPLDFSNWGST-----YEQQGILAPGED 194 (282)
T ss_dssp --------------------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSS
T ss_pred --------------------------------------------------CCccccccCCCCC-----ccccceeccCcc
Confidence 2467889999874 468899999999
Q ss_pred EEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhC----CCCCHHHHHHHHHhcccccCCCCCcccCC
Q 004077 536 ILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIH----PDWSSAAIRSALMTTAWMKNNKALPITNA 611 (775)
Q Consensus 536 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 611 (775)
|+++++. +.|..++|||||||||||++|||+|++ |.++|++||++|++||++++..
T Consensus 195 i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~------- 254 (282)
T 3zxy_A 195 ILGAKPG-------------GGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD------- 254 (282)
T ss_dssp EEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------
T ss_pred eeeecCC-------------CceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC-------
Confidence 9999887 789999999999999999999999975 7899999999999999987532
Q ss_pred CCCCCCCCccceeccCccccCC
Q 004077 612 DGSIATPFSFGSGHFRPTKAAD 633 (775)
Q Consensus 612 ~~~~~~~~~~G~G~vn~~~Al~ 633 (775)
.+.....+|+|+||+.+|++
T Consensus 255 --~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 255 --APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp ------CGGGTTCBCCHHHHHH
T ss_pred --CCCccCceeeeEeCHHHHHH
Confidence 23356679999999999986
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=8.3e-50 Score=429.26 Aligned_cols=280 Identities=27% Similarity=0.344 Sum_probs=221.6
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||+|.+. +...++|..... .
T Consensus 17 ~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~~---------~ 60 (310)
T 2ixt_A 17 DTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGATT---------P 60 (310)
T ss_dssp TTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSSS---------C
T ss_pred hhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCCC---------C
Confidence 8999999999999999999999999999642 333444543211 0
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
......|..||||||||||+|... .....+.||||+|+|+.+|++.+. + .+..+++++||+|++
T Consensus 61 ~~~~~~d~~gHGT~vAgiia~~~~--------~n~~g~~GvAp~a~l~~~~v~~~~--g------~~~~~~~~~ai~~a~ 124 (310)
T 2ixt_A 61 INNSCTDRNGHGTHVAGTALADGG--------SDQAGIYGVAPDADLWAYKVLLDS--G------SGYSDDIAAAIRHAA 124 (310)
T ss_dssp EETCCCCSSSHHHHHHHHHHCBCC--------TTSCSCBCSCTTSEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHhccCC--------CCCCceEEECCCCEEEEEEEEcCC--C------CCcHHHHHHHHHHHH
Confidence 112356789999999999998731 222335799999999999999876 4 468899999999999
Q ss_pred hCCc-----eEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCC--CCCCCCCceEEeccccccccccc
Q 004077 292 RDGV-----HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS--SLSNLAPWLITVGAGSLDRDFVG 364 (775)
Q Consensus 292 ~~gv-----dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~--~~~~~~p~vitVgAs~~~~~~~~ 364 (775)
++++ +|||||||... ....+..+++++.++|++||+||||+|.... .++...+++|+|||++...
T Consensus 125 ~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~---- 196 (310)
T 2ixt_A 125 DQATATGTKTIISMSLGSSA----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ---- 196 (310)
T ss_dssp HHHHHHTCCEEEEECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE----
T ss_pred HhhhccCCCeEEEEcCCCCC----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc----
Confidence 9988 99999999932 2466778888999999999999999997643 3344568999999854210
Q ss_pred ceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcC
Q 004077 365 PVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAG 444 (775)
Q Consensus 365 ~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~G 444 (775)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCC--ccccccCCCCCCCC-
Q 004077 445 GVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAP--FMANFTSRGPNALD- 521 (775)
Q Consensus 445 a~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~GP~~~~- 521 (775)
..+ .++.||++||....
T Consensus 197 ------------------------------------------------------------~~g~~~~~~~S~~G~~~~~g 216 (310)
T 2ixt_A 197 ------------------------------------------------------------QNGTYRVADYSSRGYISTAG 216 (310)
T ss_dssp ------------------------------------------------------------ETTEEEECTTSCCCCTTTTT
T ss_pred ------------------------------------------------------------cCCCeeeccccCCCCccCCc
Confidence 012 67889999995421
Q ss_pred ---CCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 004077 522 ---PYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTA 598 (775)
Q Consensus 522 ---d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA 598 (775)
..+.||||+|||++|+++++. +.|..++|||||||||||++|||+|++|.+++++||++|++||
T Consensus 217 ~~~~~~~~~di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA 283 (310)
T 2ixt_A 217 DYVIQEGDIEISAPGSSVYSTWYN-------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERA 283 (310)
T ss_dssp SSSCCTTCCCEEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHH
T ss_pred cccccCCCeeEECCCCCEeeecCC-------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Confidence 123599999999999999876 6899999999999999999999999999999999999999999
Q ss_pred cccCCCCCcccCCCCCCCCCCccceeccCc
Q 004077 599 WMKNNKALPITNADGSIATPFSFGSGHFRP 628 (775)
Q Consensus 599 ~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~ 628 (775)
++.+..+. .......++.+|+|++|+
T Consensus 284 ~~~~~~~~----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 284 KSVDIKGG----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp HTSCCCBS----TTCCSSSBTTTBTCBCCC
T ss_pred cccCCCCC----cccccCCccccccceeec
Confidence 98764321 112345778899999996
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.3e-50 Score=434.75 Aligned_cols=264 Identities=27% Similarity=0.359 Sum_probs=216.8
Q ss_pred cccccCCCCC--ceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCC
Q 004077 132 DLLSKARYGQ--DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNA 209 (775)
Q Consensus 132 ~~~~~~~~G~--GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 209 (775)
.+|..+ +|+ ||+|||||||||++||+|.++ +...++|..+...
T Consensus 19 ~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~------- 63 (320)
T 2z30_A 19 SVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS------- 63 (320)
T ss_dssp GGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB-------
T ss_pred HHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCccccCCccC-------
Confidence 789888 999 999999999999999999642 3333444332100
Q ss_pred CCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHH
Q 004077 210 TEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDD 289 (775)
Q Consensus 210 ~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~ 289 (775)
.+.....|..||||||||||+|.. ++ ..+.||||+|+|+.+|+++.. | .+..+++++||+|
T Consensus 64 -~~~~~~~d~~gHGT~vAgiia~~~-n~---------~g~~GvAp~a~l~~~~v~~~~--g------~~~~~~i~~ai~~ 124 (320)
T 2z30_A 64 -TKLRDCADQNGHGTHVIGTIAALN-ND---------IGVVGVAPGVQIYSVRVLDAR--G------SGSYSDIAIGIEQ 124 (320)
T ss_dssp -CCHHHHBCSSSHHHHHHHHHHCCS-SS---------BSCCCSSTTCEEEEEECSCTT--S------EEEHHHHHHHHHH
T ss_pred -CCCCCCCCCCCCHHHHHHHHHccc-CC---------CceEeeCCCCEEEEEEeeCCC--C------CccHHHHHHHHHH
Confidence 001123578999999999999862 11 124699999999999999876 4 4678999999999
Q ss_pred HHhC--------------------CceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCc
Q 004077 290 AIRD--------------------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPW 349 (775)
Q Consensus 290 a~~~--------------------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~ 349 (775)
|+++ +++|||||||... ....+..++.++.++|++||+||||+|.....++...|+
T Consensus 125 a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~ 200 (320)
T 2z30_A 125 AILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPE 200 (320)
T ss_dssp HHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTT
T ss_pred HHhCcccccccccccccccccccCCceEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCC
Confidence 9987 9999999999832 245677788889999999999999999876666677799
Q ss_pred eEEecccccccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecC
Q 004077 350 LITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRG 429 (775)
Q Consensus 350 vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g 429 (775)
+|+|||++.
T Consensus 201 vi~Vga~~~----------------------------------------------------------------------- 209 (320)
T 2z30_A 201 VIAVGAIDS----------------------------------------------------------------------- 209 (320)
T ss_dssp EEEEEEECT-----------------------------------------------------------------------
T ss_pred eEEEEeeCC-----------------------------------------------------------------------
Confidence 999998542
Q ss_pred CcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCcc
Q 004077 430 SGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFM 509 (775)
Q Consensus 430 ~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 509 (775)
.+.+
T Consensus 210 ----------------------------------------------------------------------------~~~~ 213 (320)
T 2z30_A 210 ----------------------------------------------------------------------------NDNI 213 (320)
T ss_dssp ----------------------------------------------------------------------------TSCB
T ss_pred ----------------------------------------------------------------------------CCCc
Confidence 2467
Q ss_pred ccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhC-------
Q 004077 510 ANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIH------- 582 (775)
Q Consensus 510 a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~------- 582 (775)
+.||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+|++
T Consensus 214 ~~~S~~g~----------~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~ 270 (320)
T 2z30_A 214 ASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKI 270 (320)
T ss_dssp CTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CcccCCCC----------CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccc
Confidence 89999997 789999999999876 689999999999999999999999999
Q ss_pred ------CCCCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCccceeccCccccCCC
Q 004077 583 ------PDWSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADP 634 (775)
Q Consensus 583 ------P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 634 (775)
|.+++.+||++|++||+++... ..+..+|+|+||+.+|++.
T Consensus 271 ~~~~~~p~lt~~~v~~~L~~ta~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 271 LPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CCCCCTTCCSTTSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHhhCccCCCC-----------CCCCCcCCceeCHHHHHHH
Confidence 9999999999999999987532 2456799999999999874
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.3e-50 Score=434.84 Aligned_cols=272 Identities=24% Similarity=0.273 Sum_probs=218.0
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
++|+....++||+|||||||||++||+|.+.. +.+..++..+
T Consensus 12 ~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~--------------------------~~~~~~~~~~------------ 53 (306)
T 4h6w_A 12 KLWSETRGDPKICVAVLDGIVDQNHPCFIGAD--------------------------LTRLPSLVSG------------ 53 (306)
T ss_dssp HHHHHCSCCTTCEEEEESSCCCTTSGGGTTCE--------------------------EEECC-----------------
T ss_pred HHHhhhCCCCCCEEEEEcCCCCCCChhHcCCc--------------------------ccCCCcccCC------------
Confidence 78998877899999999999999999997431 1222222221
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
+.....|..||||||||||+|+.. +.+.||||+|+|+.+|++.+.. + .+....+++||+||+
T Consensus 54 ~~~~~~d~~gHGThVAGiiag~~~-----------~~~~GVAp~a~l~~~kv~~~~~-~------~~~~~~i~~ai~~a~ 115 (306)
T 4h6w_A 54 EANANGSMSTHGTHVASIIFGQHD-----------SPVTGIAPQCRGLIVPVFADES-L------KLSQLDLSRAIEQAV 115 (306)
T ss_dssp -----CCCCHHHHHHHHHHHCCTT-----------SSSCCSSTTSEEEECCCCCSSS-C------CCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCchHHHHHHHHcccc-----------CCcceeccccccceeecccccc-c------cchHHHHHHHHHHhh
Confidence 112334678999999999998731 2357999999999999987653 2 368888999999999
Q ss_pred hCCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCceEEecccccccccccceEeCCC
Q 004077 292 RDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTG 371 (775)
Q Consensus 292 ~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~ 371 (775)
+++++|||+|||...........+..++..+.++|++||++|||+|......+...+++|+|||++.
T Consensus 116 ~~g~~vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~------------- 182 (306)
T 4h6w_A 116 NNGANIINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD------------- 182 (306)
T ss_dssp HTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-------------
T ss_pred cccceeeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-------------
Confidence 9999999999997433344556788888999999999999999999776666666789999998542
Q ss_pred cEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEe
Q 004077 372 MEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILG 451 (775)
Q Consensus 372 ~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~ 451 (775)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCceee
Q 004077 452 NSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPDITA 531 (775)
Q Consensus 452 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~A 531 (775)
.+.++.||++|+. ..||||+|
T Consensus 183 ------------------------------------------------------~~~~~~~s~~g~~-----~~~~di~A 203 (306)
T 4h6w_A 183 ------------------------------------------------------QGKPVDFSNWGDA-----YQKQGILA 203 (306)
T ss_dssp ------------------------------------------------------TSCBCSSSCBCHH-----HHHHEEEE
T ss_pred ------------------------------------------------------CCCccccccccCC-----cCcceeec
Confidence 2367789999973 46889999
Q ss_pred CCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHh----CCCCCHHHHHHHHHhcccccCCCCCc
Q 004077 532 PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI----HPDWSSAAIRSALMTTAWMKNNKALP 607 (775)
Q Consensus 532 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~~s~~~ik~~L~~TA~~~~~~g~~ 607 (775)
||++|+++.+. +.|..++|||||||||||++|||+++ +|.++|++||++|++||+++...+
T Consensus 204 PG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-- 268 (306)
T 4h6w_A 204 PGKDILGAKPN-------------GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD-- 268 (306)
T ss_dssp ECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT--
T ss_pred CCcCcccccCC-------------CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC--
Confidence 99999999887 78999999999999999999999865 599999999999999999876542
Q ss_pred ccCCCCCCCCCCccceeccCccccCC
Q 004077 608 ITNADGSIATPFSFGSGHFRPTKAAD 633 (775)
Q Consensus 608 ~~~~~~~~~~~~~~G~G~vn~~~Al~ 633 (775)
......||+|+||+.+|++
T Consensus 269 -------~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 269 -------TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp -------CSCGGGGTTCBCCHHHHHH
T ss_pred -------CCCCCCcceeecCHHHHHH
Confidence 1244579999999999997
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.6e-49 Score=433.67 Aligned_cols=270 Identities=20% Similarity=0.119 Sum_probs=215.2
Q ss_pred cccccCCCCC--ceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCC
Q 004077 132 DLLSKARYGQ--DVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNA 209 (775)
Q Consensus 132 ~~~~~~~~G~--GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 209 (775)
.+|.. ++|+ ||+||||||||| +||+|.+. ++..++|..+..
T Consensus 34 ~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~~~-------- 76 (347)
T 2iy9_A 34 ETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQDGS-------- 76 (347)
T ss_dssp HHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTTCC--------
T ss_pred HHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCCCC--------
Confidence 78988 8999 999999999999 99999642 334444443210
Q ss_pred CCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHH
Q 004077 210 TEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDD 289 (775)
Q Consensus 210 ~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~ 289 (775)
......+.|..||||||||||+|+. | +.||||+|+|+.+|++++. + .. ++++||+|
T Consensus 77 ~~~~~~~~d~~gHGT~vAgiia~~~--------g-----~~GvAp~a~l~~~~v~~~~--~-------~~--~~~~ai~~ 132 (347)
T 2iy9_A 77 PFPVKKSEALYIHGTAMASLIASRY--------G-----IYGVYPHALISSRRVIPDG--V-------QD--SWIRAIES 132 (347)
T ss_dssp SSCCSSSHHHHHHHHHHHHHHHCSS--------S-----SCCSSTTCEEEEEECCSSB--C-------TT--HHHHHHHH
T ss_pred CCCCCCCCCCCCcHHHHHHHHhccc--------C-----CcccCCCCEEEEEEEecCC--C-------HH--HHHHHHHH
Confidence 0011245678999999999999861 2 3699999999999999764 2 22 99999999
Q ss_pred HHhC------CceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCC-------CCCCCCCC--------
Q 004077 290 AIRD------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAP-------SSLSNLAP-------- 348 (775)
Q Consensus 290 a~~~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------~~~~~~~p-------- 348 (775)
|+++ +++|||||||... .......+..++..+.++|++||+||||+|... ..++...+
T Consensus 133 a~~~~~~~~~~~~Vin~S~G~~~-~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~ 211 (347)
T 2iy9_A 133 IMSNVFLAPGEEKIINISGGQKG-VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKK 211 (347)
T ss_dssp HHTCTTSCTTEEEEEEESSCBCC-C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHH
T ss_pred HHhhhhcccCCceEEEeccccCC-CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccc
Confidence 9999 9999999999832 234567788888999999999999999999753 33444457
Q ss_pred --ceEEeccccc--ccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEE
Q 004077 349 --WLITVGAGSL--DRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIV 424 (775)
Q Consensus 349 --~vitVgAs~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv 424 (775)
++|+|||++. +....
T Consensus 212 ~~~vi~Vga~~~~~~g~~~------------------------------------------------------------- 230 (347)
T 2iy9_A 212 QDPVIRVAALAQYRKGETP------------------------------------------------------------- 230 (347)
T ss_dssp TCCEEEEEEECCCCTTSCC-------------------------------------------------------------
T ss_pred cCCEEEEEEcccCCCCcee-------------------------------------------------------------
Confidence 9999998654 11000
Q ss_pred EEecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecC
Q 004077 425 LCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQ 504 (775)
Q Consensus 425 l~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~ 504 (775)
.
T Consensus 231 -------------------------------------------------------------------------------~ 231 (347)
T 2iy9_A 231 -------------------------------------------------------------------------------V 231 (347)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCC
Q 004077 505 PAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPD 584 (775)
Q Consensus 505 ~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ 584 (775)
..+.++.||++||+ ||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+
T Consensus 232 ~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~ 291 (347)
T 2iy9_A 232 LHGGGITGSRFGNN-------WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPR 291 (347)
T ss_dssp BCCCSSSCBCBCTT-------TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCC
Confidence 01355799999994 67999999999999986 68999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcccccCCCCCcccCCCCCCCCCCccceeccCccccCCCC
Q 004077 585 WSSAAIRSALMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPG 635 (775)
Q Consensus 585 ~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 635 (775)
+++++||++|++||++.... ....+|+|+||+.+|++..
T Consensus 292 lt~~~v~~~L~~tA~~~~~~------------~~~~~G~G~ld~~~A~~~~ 330 (347)
T 2iy9_A 292 ATATELKRTLLESADKYPSL------------VDKVTEGRVLNAEKAISMF 330 (347)
T ss_dssp SCHHHHHHHHHHHSEECGGG------------TTTSGGGEECCHHHHHHHH
T ss_pred CCHHHHHHHHHHhCccCCCC------------CCccccCCEecHHHHHHHH
Confidence 99999999999999987643 2368999999999999843
No 22
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.1e-48 Score=439.55 Aligned_cols=294 Identities=27% Similarity=0.297 Sum_probs=223.5
Q ss_pred cccc-cCCCCCceEEEEeecCCCC------CCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeeccccccccc
Q 004077 132 DLLS-KARYGQDVIVGLVDNGVWP------ESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLY 204 (775)
Q Consensus 132 ~~~~-~~~~G~GV~VgVIDtGid~------~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~ 204 (775)
.+|. .+++|+||+|||||||||+ .||+|.+ +++..++|.+.
T Consensus 12 ~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~----- 59 (434)
T 1wmd_A 12 VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT----- 59 (434)
T ss_dssp HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT-----
T ss_pred hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC-----
Confidence 7897 6999999999999999999 7999863 23334444321
Q ss_pred CCCCCCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHH
Q 004077 205 GPLNATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADML 284 (775)
Q Consensus 205 ~~~~~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~ 284 (775)
..+.|..||||||||||+|+. . .+.||||+|+|+.+|+++..... ....+++.
T Consensus 60 ---------~~~~d~~gHGT~VAgiiag~g---------~---~~~GvAp~a~l~~~~v~~~~g~~------~~~~~~~~ 112 (434)
T 1wmd_A 60 ---------NNANDTNGHGTHVAGSVLGNG---------S---TNKGMAPQANLVFQSIMDSGGGL------GGLPSNLQ 112 (434)
T ss_dssp ---------TCCCCSSSHHHHHHHHHHCCS---------S---SSCCSSTTSEEEEEECCCTTSSC------TTSCSSHH
T ss_pred ---------CCCCCCCCcHHHHHHHHHcCC---------C---CceeeCCCCEEEEEEeecCCCcc------ccccHHHH
Confidence 246688999999999999862 1 14699999999999999765211 12456899
Q ss_pred HHHHHHHhCCceEEEEccCCCCCCCCCccHHHHHHHHH-HcCCcEEEEecCCCCCCCCCC--CCCCCceEEecccccccc
Q 004077 285 AAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNA-VKHNILVACSAGNSGPAPSSL--SNLAPWLITVGAGSLDRD 361 (775)
Q Consensus 285 ~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~~~--~~~~p~vitVgAs~~~~~ 361 (775)
++|++|+++|++|||||||..... ..++...+++++ .++|++||+||||+|....+. +...+++|+|||++..+.
T Consensus 113 ~ai~~a~~~g~~Vin~S~G~~~~~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~ 190 (434)
T 1wmd_A 113 TLFSQAYSAGARIHTNSWGAAVNG--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRP 190 (434)
T ss_dssp HHHHHHHHTTCSEEEECCCBCCTT--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCG
T ss_pred HHHHHHHhcCCeEEEecCCCCcCC--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCc
Confidence 999999999999999999984311 224555666665 589999999999999765443 345699999999764321
Q ss_pred cccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhh
Q 004077 362 FVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVK 441 (775)
Q Consensus 362 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~ 441 (775)
...
T Consensus 191 ~~~----------------------------------------------------------------------------- 193 (434)
T 1wmd_A 191 SFG----------------------------------------------------------------------------- 193 (434)
T ss_dssp GGC-----------------------------------------------------------------------------
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCC
Q 004077 442 RAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALD 521 (775)
Q Consensus 442 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~ 521 (775)
. .....+.++.||+|||+.
T Consensus 194 ---~--------------------------------------------------------~~~~~~~~a~fS~~G~~~-- 212 (434)
T 1wmd_A 194 ---S--------------------------------------------------------YADNINHVAQFSSRGPTK-- 212 (434)
T ss_dssp ---G--------------------------------------------------------GGSCTTSBCTTSCCCCCT--
T ss_pred ---c--------------------------------------------------------ccCCCCccccccCCCCCC--
Confidence 0 001145889999999997
Q ss_pred CCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCC-----CHHHHHHHHHh
Q 004077 522 PYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDW-----SSAAIRSALMT 596 (775)
Q Consensus 522 d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~-----s~~~ik~~L~~ 596 (775)
++++||||+|||++|+++++........ .....+.|..++|||||||||||++|||+|++|++ ++++||++|++
T Consensus 213 ~g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~ 291 (434)
T 1wmd_A 213 DGRIKPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIA 291 (434)
T ss_dssp TSCCCCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred CCCCCceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHc
Confidence 6999999999999999998642210000 00113689999999999999999999999998865 89999999999
Q ss_pred cccccCCCCCcccCCCCCCCCCCccceeccCccccCCCCe
Q 004077 597 TAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGL 636 (775)
Q Consensus 597 TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 636 (775)
||+++.. ..+++.+|+|++|+.+|++..+
T Consensus 292 tA~~~~~-----------~~~~~~~G~G~vd~~~a~~~~~ 320 (434)
T 1wmd_A 292 GAADIGL-----------GYPNGNQGWGRVTLDKSLNVAY 320 (434)
T ss_dssp HCBCCSS-----------CSSCTTTTTCBCCHHHHHTCEE
T ss_pred CCcccCC-----------CCCCccCCcCeEeHHHhcccce
Confidence 9987532 2367889999999999997653
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=7.9e-49 Score=427.27 Aligned_cols=298 Identities=21% Similarity=0.277 Sum_probs=217.8
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccce---eeeeeecccccccccCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKK---IIGARYYLKGFEQLYGPLN 208 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~k---iig~~~~~~~~~~~~~~~~ 208 (775)
.+|..+++|+||+||||||||+ +||+|.+.- +.+.............+.+ ......+.+.+... +
T Consensus 23 ~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~--- 90 (340)
T 3lpc_A 23 KVWDMGFTGQNVVVAVVDTGIL-HHRDLNANV-------LPGYDFISNSQISLDGDGRDADPFDEGDWFDNWACG-G--- 90 (340)
T ss_dssp HHHHHTCSCTTCEEEEEESCBC-CCTTTGGGB-------CCCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTS-C---
T ss_pred HHHHhcCCCCCeEEEEEcCCCC-CChhhhccc-------ccCccccCCccccccCCCccCCcccccccccccccc-C---
Confidence 8999999999999999999998 999997531 1111110000000000000 00000000000000 0
Q ss_pred CCCCCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHH
Q 004077 209 ATEDDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAID 288 (775)
Q Consensus 209 ~~~~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~ 288 (775)
.+.+.....|..||||||||||+|...+. ..+.||||+|+|+.+|++... + +..++++++|+
T Consensus 91 ~~~~~~~~~d~~gHGT~vAgiia~~~~~~---------~g~~GvAp~a~l~~~~v~~~~--~-------~~~~~~~~ai~ 152 (340)
T 3lpc_A 91 RPDPRKERSDSSWHGSHVAGTIAAVTNNR---------IGVAGVAYGAKVVPVRALGRC--G-------GYDSDISDGLY 152 (340)
T ss_dssp TTCGGGSCBCCCCHHHHHHHHHHCCCSSS---------SSCCCTTTTSEEEEEECCBTT--B-------CCHHHHHHHHH
T ss_pred CCCcccCCCCCCCCHHHHHHHHHccCCCC---------CcceeecCCCEEEEEEEecCC--C-------CcHHHHHHHHH
Confidence 01112245688999999999999974332 235699999999999999876 3 68899999999
Q ss_pred HHHh----------CCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCC-CCCCCCCceEEecccc
Q 004077 289 DAIR----------DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGS 357 (775)
Q Consensus 289 ~a~~----------~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAs~ 357 (775)
||++ .+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||++
T Consensus 153 ~a~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~ 229 (340)
T 3lpc_A 153 WAAGGRIAGIPENRNPAKVINMSLGSDG---QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATT 229 (340)
T ss_dssp HHHTCCCTTSCCCSSCCSEEEECCCEES---CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEEC
T ss_pred HHhcccccccccccCCCeEEEeCcCCCC---CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCC
Confidence 9998 89999999999832 23455777788899999999999999996543 2345568999999854
Q ss_pred cccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhh
Q 004077 358 LDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKG 437 (775)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~ 437 (775)
.
T Consensus 230 ~------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 230 S------------------------------------------------------------------------------- 230 (340)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCC
Q 004077 438 MEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGP 517 (775)
Q Consensus 438 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP 517 (775)
.+.++.||++||
T Consensus 231 --------------------------------------------------------------------~~~~~~~S~~g~ 242 (340)
T 3lpc_A 231 --------------------------------------------------------------------RGIRASFSNYGV 242 (340)
T ss_dssp --------------------------------------------------------------------TSSBCTTCCBST
T ss_pred --------------------------------------------------------------------CCCcCCCCCCCC
Confidence 247789999998
Q ss_pred CCCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHh-C---CCCCHHHHHHH
Q 004077 518 NALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAI-H---PDWSSAAIRSA 593 (775)
Q Consensus 518 ~~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---P~~s~~~ik~~ 593 (775)
. |||+|||++|+++++..... .....|..++|||||||||||++|||+|+ + |.+++++||++
T Consensus 243 ~--------~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~ 308 (340)
T 3lpc_A 243 D--------VDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDV 308 (340)
T ss_dssp T--------CCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred C--------ceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHH
Confidence 4 59999999999998763211 11246999999999999999999999998 5 99999999999
Q ss_pred HHhcccccCCCCCcccCCCCCCCCCCccceeccCccccCCCC
Q 004077 594 LMTTAWMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPG 635 (775)
Q Consensus 594 L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 635 (775)
|++||++.... ++..+|+|+||+.+||+..
T Consensus 309 L~~tA~~~~~~------------~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 309 LVSTTSPFNGR------------LDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp HHHTCBCCSSC------------CSSCCCSSBCCHHHHHHHH
T ss_pred HHhcCCcCCCC------------CCCCcccceecHHHHHHHH
Confidence 99999987532 4668999999999998753
No 24
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=3.9e-48 Score=465.17 Aligned_cols=355 Identities=22% Similarity=0.189 Sum_probs=242.5
Q ss_pred CCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHh----
Q 004077 217 RDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR---- 292 (775)
Q Consensus 217 ~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~---- 292 (775)
.|+.||||||||||||.. + ...+.||||+|+|+.+|+++..... ......++.+|.+|++
T Consensus 267 ~D~~GHGThVAGIIAa~~-N---------~~g~~GVAP~AkI~~vKVld~~~g~------~~t~s~l~~AI~~Aid~a~~ 330 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-S---------SRDVDGVAPNAKIVSMTIGDGRLGS------METGTALVRAMTKVMELCRD 330 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-S---------SSSSCCSCTTCEEEEEECBCTTTSS------CBCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHhcCC-C---------CCCceeecCCCEEEEEEeccCCCCc------ccChHHHHHHHHHHHHHHhh
Confidence 478999999999999984 2 2235799999999999998765211 2356778888888887
Q ss_pred -CCceEEEEccCCCCCCCCCccHHHHHHHHHH-cCCcEEEEecCCCCCCCCCCC--C--CCCceEEecccccccccccce
Q 004077 293 -DGVHVLSISIGTNQPFAFNRDGIAIGALNAV-KHNILVACSAGNSGPAPSSLS--N--LAPWLITVGAGSLDRDFVGPV 366 (775)
Q Consensus 293 -~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~~~--~--~~p~vitVgAs~~~~~~~~~~ 366 (775)
.|++|||||||... .....+.+..++.++. ++|++||+||||+|+...+.. . ..+++|+|||++.+.......
T Consensus 331 ~~gadVINmS~G~~~-~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~y 409 (1354)
T 3lxu_X 331 GRRIDVINMSYGEHA-NWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEY 409 (1354)
T ss_dssp TCCCCEEEECCCCCC-SCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC--
T ss_pred cCCceEEEcCCccCC-CCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccc
Confidence 79999999999943 2233456777778875 899999999999998655443 3 269999999976433211100
Q ss_pred EeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCce
Q 004077 367 VLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGV 446 (775)
Q Consensus 367 ~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~ 446 (775)
..
T Consensus 410 s~------------------------------------------------------------------------------ 411 (1354)
T 3lxu_X 410 AM------------------------------------------------------------------------------ 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCC
Q 004077 447 GLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILK 526 (775)
Q Consensus 447 g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~K 526 (775)
.....+.++.||||||+. ++++|
T Consensus 412 -------------------------------------------------------~~~~~g~~asFSS~GPt~--dg~~K 434 (1354)
T 3lxu_X 412 -------------------------------------------------------REKLPGNVYTWTSRDPCI--DGGQG 434 (1354)
T ss_dssp -------------------------------------------------------------CCCCCCCCSCCS--SSSCC
T ss_pred -------------------------------------------------------ccCCCCccccccCCCCCc--cCCCc
Confidence 001135889999999997 69999
Q ss_pred CceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHH----hCCCCCHHHHHHHHHhcccccC
Q 004077 527 PDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKA----IHPDWSSAAIRSALMTTAWMKN 602 (775)
Q Consensus 527 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~~s~~~ik~~L~~TA~~~~ 602 (775)
|||+|||++|+++..... +.|..++|||||||||||++|||++ .+|.+++++||++|++||++..
T Consensus 435 pDIaAPG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~ 503 (1354)
T 3lxu_X 435 VTVCAPGGAIASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLG 503 (1354)
T ss_dssp EEEEEEC--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCT
T ss_pred ceEEecCceEEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCC
Confidence 999999999999865321 5789999999999999999999986 7999999999999999999875
Q ss_pred CCCCcccCCCCCCCCCCccceeccCccccCCCCeeeecchhhHHHhhhcCCCCCCCCcccCCCCCCCCCCCCCCeeEeec
Q 004077 603 NKALPITNADGSIATPFSFGSGHFRPTKAADPGLVYDASYEDYLLYLCSHGFSFTNPVFRCPNKPPSALNLNYPSIAIPN 682 (775)
Q Consensus 603 ~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~ 682 (775)
.. +++.||+|+||+.+|++..+.|+....+++.|+|..+..+.. .|.+.+
T Consensus 504 ~~------------~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~r------------------gIylR~ 553 (1354)
T 3lxu_X 504 YV------------DPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADK------------------GIHLRQ 553 (1354)
T ss_dssp TS------------CTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBS------------------SEEECS
T ss_pred CC------------CcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCC------------------ceEEec
Confidence 42 567899999999999999999999999999999988753220 111111
Q ss_pred --CCceEEEEEEEEec----CC----CCe--EEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEECcccccccCCC
Q 004077 683 --LNGTVIVKRTVTNV----GG----SKS--VYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTK 750 (775)
Q Consensus 683 --~~~~~t~~~tv~n~----~~----~~~--ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 750 (775)
.....+++++|+-+ .. ... .-++.+.... --|. -|..+.+ .++.++|.|.++.. ....
T Consensus 554 ~~~~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~-----~L~~- 623 (1354)
T 3lxu_X 554 GVQRNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPT-----GLQP- 623 (1354)
T ss_dssp SCCCSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGG-----GCCS-
T ss_pred cccCCceEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCC-----CCCC-
Confidence 12233444444221 11 111 1122222111 1232 3777766 36678899998873 3333
Q ss_pred ceEEEEEEEEC-----CccEEEeEEEEEe
Q 004077 751 QYVFGWYRWTD-----GLHLVRSPMAVSF 774 (775)
Q Consensus 751 ~~~~g~~~~~~-----~~~~v~~P~~~~~ 774 (775)
..+++.|..-| -++..|+|+.|..
T Consensus 624 G~h~~~v~~~D~~~~~~gp~f~ipvTv~~ 652 (1354)
T 3lxu_X 624 GVHSAVIRAYDTDCVQKGSLFEIPVTVVQ 652 (1354)
T ss_dssp EEEEEEEEEEESSCTTSCCSEEEEEEEEE
T ss_pred cceeEEEEEEEcCCcccCceEEeeEEEEe
Confidence 46689988665 2689999998753
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.3e-47 Score=403.54 Aligned_cols=236 Identities=24% Similarity=0.346 Sum_probs=200.5
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||+|.+. ++..++|.++
T Consensus 20 ~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~------------ 60 (284)
T 1sh7_A 20 RNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVDN------------ 60 (284)
T ss_dssp SBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTTT------------
T ss_pred hhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccCC------------
Confidence 7899999999999999999999999999642 3334455432
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
...+.|..||||||||||+|+. .||||+|+|+.+|++++. | .+..+++++||+|++
T Consensus 61 -~~~~~d~~gHGT~vAgiia~~~---------------~GvAp~a~l~~~kv~~~~--g------~~~~~~~~~ai~~a~ 116 (284)
T 1sh7_A 61 -DADSSDCNGHGTHVAGTIGGSQ---------------YGVAKNVNIVGVRVLSCS--G------SGTTSGVISGVDWVA 116 (284)
T ss_dssp -BSCCCCSSSHHHHHHHHHHCTT---------------TCSSTTCEEEEEECBCTT--S------CBCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCcHHHHHHHHhccc---------------CCcCCCCEEEEEEeeCCC--C------CcCHHHHHHHHHHHH
Confidence 1245688999999999999862 499999999999999876 4 468899999999999
Q ss_pred h--CCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCC-CCCCCCCceEEecccccccccccceEe
Q 004077 292 R--DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVGPVVL 368 (775)
Q Consensus 292 ~--~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAs~~~~~~~~~~~~ 368 (775)
+ .+++|||||||.. ....+..+++++.++|++||+||||+|.... ..+...|++|+|||++.
T Consensus 117 ~~~~~~~Vin~S~G~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (284)
T 1sh7_A 117 QNASGPSVANMSLGGG-----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS---------- 181 (284)
T ss_dssp HHCCSSEEEEECCCBS-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT----------
T ss_pred hCCCCCcEEEeCCCCC-----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC----------
Confidence 8 4799999999983 3467888888999999999999999996532 33455689999998542
Q ss_pred CCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEE
Q 004077 369 GTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGL 448 (775)
Q Consensus 369 ~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~ 448 (775)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCc
Q 004077 449 ILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPD 528 (775)
Q Consensus 449 i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPD 528 (775)
.+.++.||++||.+ |
T Consensus 182 ---------------------------------------------------------~~~~~~~S~~G~~~--------d 196 (284)
T 1sh7_A 182 ---------------------------------------------------------SDSRSSFSNWGSCV--------D 196 (284)
T ss_dssp ---------------------------------------------------------TSBBCTTCCBSTTC--------C
T ss_pred ---------------------------------------------------------CCCcCcccCCCCcc--------E
Confidence 24678999999976 9
Q ss_pred eeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCC
Q 004077 529 ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 603 (775)
Q Consensus 529 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~ 603 (775)
|+|||++|+++++. +.|..++|||||||||||++|||+|++|++++++||++|++||++...
T Consensus 197 i~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 197 LFAPGSQIKSAWYD-------------GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp EEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred EEeccCCeEEecCC-------------CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCc
Confidence 99999999999876 689999999999999999999999999999999999999999998653
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.3e-47 Score=402.40 Aligned_cols=229 Identities=28% Similarity=0.336 Sum_probs=194.1
Q ss_pred ccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCCC
Q 004077 133 LLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATED 212 (775)
Q Consensus 133 ~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 212 (775)
.|. ..+|+||+|+|||||||++||+|.+. +...++|..
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~~-------------- 61 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYYY-------------- 61 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESSS--------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCCC--------------
Confidence 454 47999999999999999999999642 223344431
Q ss_pred CCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHh
Q 004077 213 DRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR 292 (775)
Q Consensus 213 ~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~ 292 (775)
.+.|..||||||||||+|+ ..||||+|+|+.+|++++. + .+..+++++||+|+++
T Consensus 62 --~~~d~~gHGT~vAgiia~~---------------~~GvAp~a~i~~~~v~~~~--g------~~~~~~~~~ai~~a~~ 116 (279)
T 2pwa_A 62 --SSRDGNGHGTHCAGTVGSR---------------TYGVAKKTQLFGVKVLDDN--G------SGQYSTIIAGMDFVAS 116 (279)
T ss_dssp --CSSCSSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHhc---------------ccccCCCCEEEEEEeEcCC--C------CcCHHHHHHHHHHHHh
Confidence 3557899999999999986 1499999999999999876 4 4688999999999999
Q ss_pred CCc-------eEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCC-CCCCCCCceEEeccccccccccc
Q 004077 293 DGV-------HVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVG 364 (775)
Q Consensus 293 ~gv-------dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAs~~~~~~~~ 364 (775)
+++ +|||||||.. ....+..+++++.++|++||+||||+|.... ..+...|++|+|||++.
T Consensus 117 ~~~~~~~~~~~Vin~S~G~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------ 185 (279)
T 2pwa_A 117 DKNNRNCPKGVVASLSLGGG-----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR------ 185 (279)
T ss_dssp HGGGSCCTTEEEEEECCCEE-----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------
T ss_pred cCccccCCCccEEEecCCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC------
Confidence 887 9999999982 3467888889999999999999999997543 23455689999998542
Q ss_pred ceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcC
Q 004077 365 PVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAG 444 (775)
Q Consensus 365 ~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~G 444 (775)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCC
Q 004077 445 GVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYI 524 (775)
Q Consensus 445 a~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~ 524 (775)
.+.++.||++||.+
T Consensus 186 -------------------------------------------------------------~~~~~~~S~~G~~~----- 199 (279)
T 2pwa_A 186 -------------------------------------------------------------YDRRSSFSNYGSVL----- 199 (279)
T ss_dssp -------------------------------------------------------------TSBBCTTCCBSTTC-----
T ss_pred -------------------------------------------------------------CCCcCCcCCCCCcc-----
Confidence 24778999999965
Q ss_pred CCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 004077 525 LKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKN 602 (775)
Q Consensus 525 ~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~ 602 (775)
||+|||++|+++++. +.|..++|||||||||||++|||+|+ |.+++++||++|++||++..
T Consensus 200 ---di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~ 260 (279)
T 2pwa_A 200 ---DIFGPGTDILSTWIG-------------GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGD 260 (279)
T ss_dssp ---CEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESC
T ss_pred ---eEEEecCCeEEeecC-------------CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccc
Confidence 999999999999986 68999999999999999999999999 99999999999999999764
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=7.2e-47 Score=399.29 Aligned_cols=237 Identities=25% Similarity=0.346 Sum_probs=200.7
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||+|.+. +...++|..
T Consensus 22 ~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------- 61 (276)
T 4dzt_A 22 NSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALG------------- 61 (276)
T ss_dssp SCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTS-------------
T ss_pred cceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCC-------------
Confidence 7899999999999999999999999999642 233333332
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
..+.|..||||||||||+|.. .||||+|+|+.+|++++. + ....++++++++|++
T Consensus 62 --~~~~d~~gHGT~vAgiiag~~---------------~GvAp~a~l~~~~v~~~~--~------~~~~~~~~~ai~~~~ 116 (276)
T 4dzt_A 62 --GNGQDCNGHGTHVAGTIGGVT---------------YGVAKAVNLYAVRVLDCN--G------SGSTSGVIAGVDWVT 116 (276)
T ss_dssp --SCSCCSSSHHHHHHHHHHCTT---------------TCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHccc---------------cCCCCCCEEEEEEEeCCC--C------CcCHHHHHHHHHHHH
Confidence 145678999999999999861 499999999999999876 4 478899999999999
Q ss_pred hC--CceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCC-CCCCCceEEecccccccccccceEe
Q 004077 292 RD--GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL-SNLAPWLITVGAGSLDRDFVGPVVL 368 (775)
Q Consensus 292 ~~--gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVgAs~~~~~~~~~~~~ 368 (775)
+. +++|||||||.. ....+..+++++.++|++||+||||+|...... +...+++|+|||++.
T Consensus 117 ~~~~~~~vin~S~g~~-----~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (276)
T 4dzt_A 117 RNHRRPAVANMSLGGG-----VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS---------- 181 (276)
T ss_dssp HHCCSSEEEEECCCEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred hcCCCCeEEEECCCCC-----CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC----------
Confidence 87 999999999982 246788888999999999999999999654332 455689999998542
Q ss_pred CCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEE
Q 004077 369 GTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGL 448 (775)
Q Consensus 369 ~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~ 448 (775)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCc
Q 004077 449 ILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPD 528 (775)
Q Consensus 449 i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPD 528 (775)
.+.++.||++||.. |
T Consensus 182 ---------------------------------------------------------~~~~~~~S~~g~~~--------d 196 (276)
T 4dzt_A 182 ---------------------------------------------------------SDARASFSNYGSCV--------D 196 (276)
T ss_dssp ---------------------------------------------------------TSBBCTTCCBSTTC--------C
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCCc--------e
Confidence 24778999999976 9
Q ss_pred eeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCC
Q 004077 529 ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNK 604 (775)
Q Consensus 529 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~ 604 (775)
|+|||++|++++.... ..|..++|||||||+|||++|||+|++|++++++||++|++||++....
T Consensus 197 v~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 261 (276)
T 4dzt_A 197 LFAPGASIPSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLS 261 (276)
T ss_dssp EEEECSSEEEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred EEeCCCCeEccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccC
Confidence 9999999999987632 4799999999999999999999999999999999999999999987543
No 28
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=6.9e-47 Score=399.32 Aligned_cols=237 Identities=26% Similarity=0.341 Sum_probs=198.8
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||+|.+. +...++|.++
T Consensus 22 ~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~~------------ 62 (278)
T 2b6n_A 22 NNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFIDN------------ 62 (278)
T ss_dssp SEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTTT------------
T ss_pred hhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCCC------------
Confidence 6899999999999999999999999999642 2334444432
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
...+.|..||||||||||+|+. .||||+|+|+.+|++++. + .+..++++++|+|++
T Consensus 63 -~~~~~d~~gHGT~vAgiia~~~---------------~GvAp~a~i~~~~v~~~~--g------~~~~~~~~~ai~~a~ 118 (278)
T 2b6n_A 63 -DYDATDCNGHGTHVAGTIGGST---------------YGVAKNVNVVGVRVLNCS--G------SGSNSGVIAGINWVK 118 (278)
T ss_dssp -BSCCCCSSSHHHHHHHHHHCTT---------------TCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCcHHHHHHHHHCCC---------------cCCCCCCeEEEEEEECCC--C------CccHHHHHHHHHHHH
Confidence 1245688999999999999861 499999999999999876 4 468899999999999
Q ss_pred h--CCceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCC-CCCCCCceEEecccccccccccceEe
Q 004077 292 R--DGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSS-LSNLAPWLITVGAGSLDRDFVGPVVL 368 (775)
Q Consensus 292 ~--~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgAs~~~~~~~~~~~~ 368 (775)
+ .+++|||||||... ...+..++.++.++|++||+||||+|..... .+...+++|+|||++.
T Consensus 119 ~~~~g~~Vin~S~G~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 183 (278)
T 2b6n_A 119 NNASGPAVANMSLGGGA-----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---------- 183 (278)
T ss_dssp HHCCSSEEEEECCCEEC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred hCCCCCeEEEECCCCCc-----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----------
Confidence 7 59999999999832 4677788889999999999999999965432 3445689999998542
Q ss_pred CCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcCceEE
Q 004077 369 GTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGL 448 (775)
Q Consensus 369 ~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~ 448 (775)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCCCCCc
Q 004077 449 ILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYILKPD 528 (775)
Q Consensus 449 i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~~KPD 528 (775)
.+.++.||++||.. |
T Consensus 184 ---------------------------------------------------------~~~~~~~S~~G~~~--------d 198 (278)
T 2b6n_A 184 ---------------------------------------------------------NDSRSSFSNYGTCL--------D 198 (278)
T ss_dssp ---------------------------------------------------------TSBBCTTCCBSTTC--------C
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCCC--------e
Confidence 24678999999865 9
Q ss_pred eeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 004077 529 ITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKN 602 (775)
Q Consensus 529 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~ 602 (775)
|+|||++|++++.... +.|..++|||||||||||++|||+|++|.+++++||++|++||++..
T Consensus 199 i~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 199 IYAPGSSITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp EEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred EEeCCCCeECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 9999999999986521 57899999999999999999999999999999999999999998754
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.4e-46 Score=438.31 Aligned_cols=299 Identities=20% Similarity=0.180 Sum_probs=203.5
Q ss_pred ccccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCC
Q 004077 131 QDLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNAT 210 (775)
Q Consensus 131 ~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 210 (775)
..+|..+++|+||+|||||||||++||+|.+.- ..+.++|..+.
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~---------- 103 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCS----------
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCC----------
Confidence 389999999999999999999999999997431 11223343321
Q ss_pred CCCCCCCC-CCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCC-CHHHHHHHHH
Q 004077 211 EDDRSPRD-MDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTC-FEADMLAAID 288 (775)
Q Consensus 211 ~~~~~~~D-~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~-~~~~i~~ai~ 288 (775)
+...|.| +.||||||||||||. .++. .+.||||+|+|+.+|+++.. + .. ....+++...
T Consensus 104 -~d~~p~d~~~gHGT~vAGiiaa~-~n~~---------g~~GVAp~A~l~~vkv~~~~--~------~~~~~~~~~~~~~ 164 (600)
T 2oxa_A 104 -DDPTPTDPDTGHGTSVSGIIAAV-DNAI---------GTKGIAPRAQLQGFNLLDDN--S------QQLQKDWLYALGD 164 (600)
T ss_dssp -SCCCCCSTTCCHHHHHHHHHHCC-SSSS---------SCCCSSTTCEEEEECTTSTT--C------CCCHHHHHHHTTT
T ss_pred -CCCCCCCCCCCCccHHHHHhhcc-cCCC---------cceEEccCCceEEEeeecCc--c------cchHHHHHHHHhh
Confidence 1123444 789999999999997 2222 24699999999999999876 3 12 1234444444
Q ss_pred HHHhCCceEEEEccCCCCCCCCCcc----HHHHHHHH---HHcCCcEEEEecCCCCCCCC--------------------
Q 004077 289 DAIRDGVHVLSISIGTNQPFAFNRD----GIAIGALN---AVKHNILVACSAGNSGPAPS-------------------- 341 (775)
Q Consensus 289 ~a~~~gvdVIn~SlG~~~~~~~~~~----~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~-------------------- 341 (775)
.+..++++|||||||.........+ .+..++.. +.++|++||+||||+|....
T Consensus 165 ~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~ 244 (600)
T 2oxa_A 165 SNASRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENS 244 (600)
T ss_dssp SHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBT
T ss_pred hhcccCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCcccccccccccc
Confidence 4777899999999998432222222 22222222 45789999999999986311
Q ss_pred --CCCCCCCceEEecccccccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCce
Q 004077 342 --SLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKV 419 (775)
Q Consensus 342 --~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 419 (775)
...+.++|+|+|||++
T Consensus 245 n~~~~~~s~~vItVgA~~-------------------------------------------------------------- 262 (600)
T 2oxa_A 245 NLDPSNSNFWNLVVSALN-------------------------------------------------------------- 262 (600)
T ss_dssp TSSGGGGSSSEEEEEEEC--------------------------------------------------------------
T ss_pred ccCCcccCceeEEEeccc--------------------------------------------------------------
Confidence 0011234566666532
Q ss_pred eceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceE
Q 004077 420 KGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQART 499 (775)
Q Consensus 420 ~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~ 499 (775)
T Consensus 263 -------------------------------------------------------------------------------- 262 (600)
T 2oxa_A 263 -------------------------------------------------------------------------------- 262 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccC-------CCCC--C------------cccCCcccccc
Q 004077 500 VLHTQPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSE-------ASSP--S------------KLAFDKRIVKY 558 (775)
Q Consensus 500 ~~~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~-------~~~~--~------------~~~~~~~~~~y 558 (775)
..+.++.||++||+. ||+|||++|.+..+. .... . ....+...+.|
T Consensus 263 -----~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y 329 (600)
T 2oxa_A 263 -----ADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYN 329 (600)
T ss_dssp -----TTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEE
T ss_pred -----CCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccc
Confidence 135788999999987 999999995443321 1000 0 00001112348
Q ss_pred EEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCccc--------------------CCCCCCCCC
Q 004077 559 TIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPIT--------------------NADGSIATP 618 (775)
Q Consensus 559 ~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~ 618 (775)
..++|||||||||||++|||+|++|+|++++||++|++||++++..+.++. ........+
T Consensus 330 ~~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~ 409 (600)
T 2oxa_A 330 GVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFS 409 (600)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEB
T ss_pred cccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCcccc
Confidence 999999999999999999999999999999999999999999865432210 011122346
Q ss_pred CccceeccCccccCCCCeeee
Q 004077 619 FSFGSGHFRPTKAADPGLVYD 639 (775)
Q Consensus 619 ~~~G~G~vn~~~Al~~~lv~~ 639 (775)
+.||||+||+.+|++.+..+.
T Consensus 410 ~~~G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 410 PTYGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp TTTBTCBCCHHHHHHHHTTCC
T ss_pred ccCCCchhhHHHHHHHHHhcc
Confidence 789999999999998655443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=2.6e-46 Score=423.75 Aligned_cols=291 Identities=14% Similarity=0.081 Sum_probs=214.3
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||+|.+.-. ....++|.++... +.
T Consensus 29 ~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~~~~-------p~ 76 (471)
T 1p8j_A 29 EAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASFDVNDQDPD-------PQ 76 (471)
T ss_dssp HHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCEETTTTBSC-------CC
T ss_pred HHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcccccCCCCC-------CC
Confidence 899999999999999999999999999974310 0112334332110 01
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
+...+.|..||||||||||||...++. .+.||||+|+|+.+|+++ | ..+++++|+++++
T Consensus 77 ~~~~~~d~~gHGT~vAGiiaa~~~n~~---------g~~GvAp~a~i~~~rv~~----g--------~~~~~~~ai~~a~ 135 (471)
T 1p8j_A 77 PRYTQMNDNRHGTRCAGEVAAVANNGV---------CGVGVAYNARIGGVRMLD----G--------EVTDAVEARSLGL 135 (471)
T ss_dssp CCCCTTCTTCHHHHHHHHHHCCSSSSS---------SCCCTTTTSEEEEEECSS----S--------CCCHHHHHHHHTS
T ss_pred CccCCCCCCCcHHHHHHHHHeeccCCC---------CCEEECCCCeEEEEEccC----C--------chhHHHHHHHhhh
Confidence 112456889999999999999743222 246999999999999985 2 3568999999999
Q ss_pred h-CCceEEEEccCCCCCCC---CCccHHHHHHHHHHc-----CCcEEEEecCCCCCCCCC--C--CCCCCceEEeccccc
Q 004077 292 R-DGVHVLSISIGTNQPFA---FNRDGIAIGALNAVK-----HNILVACSAGNSGPAPSS--L--SNLAPWLITVGAGSL 358 (775)
Q Consensus 292 ~-~gvdVIn~SlG~~~~~~---~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~G~~~~~--~--~~~~p~vitVgAs~~ 358 (775)
+ ++++|||||||...... .....+..++.++.+ +|++||+||||+|..... . ...++++|+|||++.
T Consensus 136 ~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~ 215 (471)
T 1p8j_A 136 NPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ 215 (471)
T ss_dssp CTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT
T ss_pred ccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC
Confidence 9 99999999999843211 122334455555543 699999999999965322 1 123478999998542
Q ss_pred ccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhh
Q 004077 359 DRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGM 438 (775)
Q Consensus 359 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~ 438 (775)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCC
Q 004077 439 EVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPN 518 (775)
Q Consensus 439 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~ 518 (775)
.+.++.||++||.
T Consensus 216 -------------------------------------------------------------------~g~~a~~S~~g~~ 228 (471)
T 1p8j_A 216 -------------------------------------------------------------------FGNVPWYSEACSS 228 (471)
T ss_dssp -------------------------------------------------------------------TSCCCTTCCBCTT
T ss_pred -------------------------------------------------------------------CCCcccccCCCCc
Confidence 2467899999998
Q ss_pred CCCCCCCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 004077 519 ALDPYILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTA 598 (775)
Q Consensus 519 ~~~d~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA 598 (775)
.. ...+|...+||.+|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||
T Consensus 229 ~~--~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA 294 (471)
T 1p8j_A 229 TL--ATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTS 294 (471)
T ss_dssp CC--EEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHC
T ss_pred ce--EEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcC
Confidence 72 445666666778999997641 4689999999999999999999999999999999999999999
Q ss_pred cccCCCCCcccCCCCCCCCCCccceeccCccccCCCCe
Q 004077 599 WMKNNKALPITNADGSIATPFSFGSGHFRPTKAADPGL 636 (775)
Q Consensus 599 ~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 636 (775)
++.+...............+..||+|+||+.+|++.+.
T Consensus 295 ~~~~~~~~~~~~n~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 295 KPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp BCTTCCCSCCEECTTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred ccCCCCCCCceecCCCcccCCCCCCEEEcHhHHHHHhh
Confidence 98864322111111112245789999999999998544
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=1.2e-45 Score=421.19 Aligned_cols=284 Identities=17% Similarity=0.145 Sum_probs=213.9
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||+|.+.- + ..+.++|..+. .
T Consensus 45 ~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~~d~~~~~----------~ 89 (503)
T 2id4_A 45 DLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGSWDFNDNT----------N 89 (503)
T ss_dssp HHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGCEETTTTB----------S
T ss_pred HHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCcccCCCCC----------C
Confidence 89999999999999999999999999997531 0 01233444321 0
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
+.....|..||||||||||||...++. .+.||||+|+|+.+|+++.. +...++++||+|++
T Consensus 90 ~~~p~~d~~gHGT~vAGiiaa~~~n~~---------~~~GvAp~a~i~~~rv~~~~----------~~~~~~~~ai~~a~ 150 (503)
T 2id4_A 90 LPKPRLSDDYHGTRCAGEIAAKKGNNF---------CGVGVGYNAKISGIRILSGD----------ITTEDEAASLIYGL 150 (503)
T ss_dssp CCCCCSTTTTHHHHHHHHHHCCSSSSS---------SCCCTTTTSEEEEEECTTSC----------CCHHHHHHHTTTTT
T ss_pred CCCCCCCCCChHHHHHHHHHhccCCCC---------CcEEECCCCEEEEEEeeCCC----------CChHHHHHHHHhHh
Confidence 111235788999999999999743222 24699999999999998743 57889999999999
Q ss_pred hCCceEEEEccCCCCCCC---CCccHHHHHHHHHH-----cCCcEEEEecCCCCCCCCC--CCC--CCCceEEecccccc
Q 004077 292 RDGVHVLSISIGTNQPFA---FNRDGIAIGALNAV-----KHNILVACSAGNSGPAPSS--LSN--LAPWLITVGAGSLD 359 (775)
Q Consensus 292 ~~gvdVIn~SlG~~~~~~---~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~--~~~--~~p~vitVgAs~~~ 359 (775)
+++ +|||||||...... .....+..++.++. .+|++||+||||+|..... ... .++++|+|||++.
T Consensus 151 ~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~- 228 (503)
T 2id4_A 151 DVN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH- 228 (503)
T ss_dssp TTC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT-
T ss_pred hcC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC-
Confidence 988 99999999843211 12344666666665 4799999999999965332 121 3478999998542
Q ss_pred cccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhH
Q 004077 360 RDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGME 439 (775)
Q Consensus 360 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~ 439 (775)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCC
Q 004077 440 VKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNA 519 (775)
Q Consensus 440 ~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~ 519 (775)
.+.++.||++||..
T Consensus 229 ------------------------------------------------------------------~~~~a~~S~~g~~~ 242 (503)
T 2id4_A 229 ------------------------------------------------------------------KDLHPPYSEGCSAV 242 (503)
T ss_dssp ------------------------------------------------------------------TSCCCTTCCCCTTE
T ss_pred ------------------------------------------------------------------CCCcCCcCCCCCcc
Confidence 24678999999987
Q ss_pred CCCCCCCCceee----CCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 004077 520 LDPYILKPDITA----PGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALM 595 (775)
Q Consensus 520 ~~d~~~KPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~ 595 (775)
|++| ||..|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|+
T Consensus 243 --------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~ 302 (503)
T 2id4_A 243 --------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSI 302 (503)
T ss_dssp --------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred --------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHH
Confidence 8887 899999995431 5799999999999999999999999999999999999999
Q ss_pred hcccccCCC-CCcccCCCCCCCCCCccceeccCccccCCCCee
Q 004077 596 TTAWMKNNK-ALPITNADGSIATPFSFGSGHFRPTKAADPGLV 637 (775)
Q Consensus 596 ~TA~~~~~~-g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv 637 (775)
+||+++... .............+..||+|+||+.+|++.+.-
T Consensus 303 ~tA~~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~~ 345 (503)
T 2id4_A 303 LSAVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKT 345 (503)
T ss_dssp HHCBCCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHTS
T ss_pred hccccCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHHhc
Confidence 999987643 111111111122456799999999999985443
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=2.2e-45 Score=411.63 Aligned_cols=279 Identities=21% Similarity=0.209 Sum_probs=199.6
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
..|..+++|+||+|+|||||||++||+|.++- ......+..+.+ + ..
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~~d---g----~~ 63 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPEED---G----TR 63 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCCCC----------
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccCCC---C----cc
Confidence 47888999999999999999999999997531 001111110000 0 00
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
-...+.|..||||||||||+|+. .||||+|+|+.+|++++. | ....+++++||+|++
T Consensus 64 f~~~~~D~~GHGThVAGIIag~~---------------~GVAP~A~L~~vkVl~~~--G------~g~~s~ii~ai~~a~ 120 (546)
T 2qtw_B 64 FHRQASKCDSHGTHLAGVVSGRD---------------AGVAKGASMRSLRVLNCQ--G------KGTVSGTLIGLEFIR 120 (546)
T ss_dssp ----CTTTTHHHHHHHHHHHCTT---------------TCSSTTCEEEEEECSCTT--S------EEEHHHHHHHHHHHH
T ss_pred ccCCCCCCCChHHHHHHHHhccC---------------CCcCCCCEEEEEEEECCC--C------CcCHHHHHHHHHHHH
Confidence 00245688999999999999862 499999999999999876 4 467899999999999
Q ss_pred hC------CceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCC-CCCCCCCceEEeccccccccccc
Q 004077 292 RD------GVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPS-SLSNLAPWLITVGAGSLDRDFVG 364 (775)
Q Consensus 292 ~~------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAs~~~~~~~~ 364 (775)
+. +++|||||||+. ....+..++.++.++|++||+||||+|.+.. ..+...|++|+|||++.+...
T Consensus 121 ~~~~~~~~g~~VINmSlGg~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~-- 193 (546)
T 2qtw_B 121 KSQLVQPVGPLVVLLPLAGG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP-- 193 (546)
T ss_dssp HHHHHSCCSCEEEEECEEEE-----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB--
T ss_pred HhhhhccCCCeEEEecCCCC-----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc--
Confidence 74 999999999982 3467888889999999999999999996542 234556999999986532200
Q ss_pred ceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhcC
Q 004077 365 PVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAG 444 (775)
Q Consensus 365 ~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~G 444 (775)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCCC
Q 004077 445 GVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPYI 524 (775)
Q Consensus 445 a~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~~ 524 (775)
...-..||++||.
T Consensus 194 -------------------------------------------------------------a~~s~~fSn~G~~------ 206 (546)
T 2qtw_B 194 -------------------------------------------------------------VTLGTLGTNFGRC------ 206 (546)
T ss_dssp -------------------------------------------------------------CEETTEECCBSTT------
T ss_pred -------------------------------------------------------------ccccCCcCCCCCc------
Confidence 0001128999984
Q ss_pred CCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCC
Q 004077 525 LKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNK 604 (775)
Q Consensus 525 ~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~ 604 (775)
|||+|||++|+++++... ..|..++|||||||||||++|||+|++|++++++||++|++||.+....
T Consensus 207 --vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~ 273 (546)
T 2qtw_B 207 --VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVIN 273 (546)
T ss_dssp --CCEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSC
T ss_pred --ceEEecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccC
Confidence 499999999999987632 4789999999999999999999999999999999999999999865422
Q ss_pred CCccc------CCC---CCCCCCCccceec--cCccccCC
Q 004077 605 ALPIT------NAD---GSIATPFSFGSGH--FRPTKAAD 633 (775)
Q Consensus 605 g~~~~------~~~---~~~~~~~~~G~G~--vn~~~Al~ 633 (775)
...+. ... ........+|+|+ .++..+..
T Consensus 274 ~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 274 EAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp GGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred CccCccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 11000 000 0112456688888 77777765
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=2.2e-45 Score=388.51 Aligned_cols=231 Identities=26% Similarity=0.326 Sum_probs=195.1
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
..|... +|+||+|||||||||++||+|.+. +...++|..
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------- 62 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAS------------- 62 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSS-------------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCC-------------
Confidence 566655 999999999999999999999642 333333432
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAI 291 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~ 291 (775)
...|..||||||||||+|+ ..||||+|+|+.+|+++.. + .+..++++++|+|++
T Consensus 63 ---~~~d~~gHGT~vAgii~~~---------------~~GvAp~a~l~~~~v~~~~--~------~~~~~~~~~ai~~~~ 116 (279)
T 3f7m_A 63 ---TARDGHGHGTHCAGTIGSK---------------TWGVAKKVSIFGVKVLDDS--G------SGSLSNIIAGMDFVA 116 (279)
T ss_dssp ---SSSCSSSHHHHHHHHHHCT---------------TTCSSTTCEEEEEECSCTT--S------CCCHHHHHHHHHHHH
T ss_pred ---CCCCCCCcHHHHHHHHhcC---------------ccccCCCCEEEEEEeeCCC--C------CcCHHHHHHHHHHHH
Confidence 1237899999999999986 1499999999999999876 4 478899999999999
Q ss_pred hCC-------ceEEEEccCCCCCCCCCccHHHHHHHHHHcCCcEEEEecCCCCCCCCCC-CCCCCceEEecccccccccc
Q 004077 292 RDG-------VHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSL-SNLAPWLITVGAGSLDRDFV 363 (775)
Q Consensus 292 ~~g-------vdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVgAs~~~~~~~ 363 (775)
+++ ++|||||||.. ....+..++.++.++|++||+||||+|...... +...+++|+|||++.
T Consensus 117 ~~~~~~~~~~~~Vin~S~g~~-----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~----- 186 (279)
T 3f7m_A 117 SDRQSRNCPRRTVASMSLGGG-----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS----- 186 (279)
T ss_dssp HHGGGSCCTTEEEEEECCCEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-----
T ss_pred hccccccCCCCeEEEeCCCcC-----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC-----
Confidence 876 99999999982 456788888999999999999999999764332 455689999998542
Q ss_pred cceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceeceEEEEecCCcchhhhhhHhhhc
Q 004077 364 GPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRGSGFKLSKGMEVKRA 443 (775)
Q Consensus 364 ~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~ 443 (775)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEeecCCCCccccccCCCCCCCCCC
Q 004077 444 GGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVLHTQPAPFMANFTSRGPNALDPY 523 (775)
Q Consensus 444 Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~d~ 523 (775)
.+.++.||++||..
T Consensus 187 --------------------------------------------------------------~~~~~~~S~~g~~~---- 200 (279)
T 3f7m_A 187 --------------------------------------------------------------NDVRSTFSNYGRVV---- 200 (279)
T ss_dssp --------------------------------------------------------------TSBBCTTCCBSTTC----
T ss_pred --------------------------------------------------------------CCCCCCCCCCCCCC----
Confidence 24778999999966
Q ss_pred CCCCceeeCCCcEEEcccCCCCCCcccCCccccccEEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCC
Q 004077 524 ILKPDITAPGLNILAAWSEASSPSKLAFDKRIVKYTIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNN 603 (775)
Q Consensus 524 ~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~ 603 (775)
||+|||++|+++++. +.|..++|||||||+|||++|||+|++|. ++++||++|++||++...
T Consensus 201 ----di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~ 262 (279)
T 3f7m_A 201 ----DIFAPGTSITSTWIG-------------GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVL 262 (279)
T ss_dssp ----CEEEECSSEEEECGG-------------GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCC
T ss_pred ----eEEECCCCeEeecCC-------------CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccccc
Confidence 999999999999886 68999999999999999999999999999 999999999999998643
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.2e-42 Score=406.67 Aligned_cols=296 Identities=20% Similarity=0.189 Sum_probs=199.3
Q ss_pred cccccCCCCCceEEEEeecCCCCCCCCCCCCCCCCCCCCccceeecCCccCcccccceeeeeeecccccccccCCCCCCC
Q 004077 132 DLLSKARYGQDVIVGLVDNGVWPESKSFSDEGMGPVPKSWKGICQTGVAFNSSLCNKKIIGARYYLKGFEQLYGPLNATE 211 (775)
Q Consensus 132 ~~~~~~~~G~GV~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~g~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 211 (775)
.+|..+++|+||+|||||||||++||||.++- ..+.++|..+. .
T Consensus 61 ~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--------------------------~~~~~~~~~~~----------~ 104 (600)
T 3hjr_A 61 WAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS----------D 104 (600)
T ss_dssp HHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTSS----------S
T ss_pred HHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--------------------------ccCcceeecCC----------C
Confidence 79999999999999999999999999997430 11223333221 1
Q ss_pred CCCCCCCCCCccccchhhhcccCCCCCCccCCcCCcceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHH-HHH
Q 004077 212 DDRSPRDMDGHGTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAI-DDA 290 (775)
Q Consensus 212 ~~~~~~D~~gHGTHVAGiiaG~~~~~~~~~gg~~~g~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai-~~a 290 (775)
+.....|+.||||||||||||.. ++ ..+.||||+|+|+.+|++++. + ....++++.|+ +++
T Consensus 105 dp~p~~~~~gHGThVAGiIAa~~-n~---------~g~~GVAp~A~l~~~rvl~~~--~------~~~~~~~~~a~~~~~ 166 (600)
T 3hjr_A 105 DPTPTDPDTAHGTSVSGIIAAVD-NA---------IGTKGIAPRAQLQGFNLLDDN--S------QQLQKDWLYALGDSN 166 (600)
T ss_dssp CCCCCSTTCCHHHHHHHHHHCCS-SS---------SSCCCSSTTCEEEEECTTSTT--C------CCCHHHHHHHTTSSH
T ss_pred CCCCCCCCCChHHHHHHHHhEeC-CC---------CCcEEeCCCCEEEEEEeecCC--C------CccHHHHHHHhhhhh
Confidence 11233457899999999999852 11 124699999999999999876 3 35677777776 667
Q ss_pred HhCCceEEEEccCCCCCCCCCccH-----HHHHHHH--HHcCCcEEEEecCCCCCCCCCCC-------------------
Q 004077 291 IRDGVHVLSISIGTNQPFAFNRDG-----IAIGALN--AVKHNILVACSAGNSGPAPSSLS------------------- 344 (775)
Q Consensus 291 ~~~gvdVIn~SlG~~~~~~~~~~~-----~~~a~~~--a~~~Gi~vV~AAGN~G~~~~~~~------------------- 344 (775)
..++++|||||||.........+. +..++.. ...+|+++|+||||.+.......
T Consensus 167 ~~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~ 246 (600)
T 3hjr_A 167 ASRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNL 246 (600)
T ss_dssp HHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTS
T ss_pred hhcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccc
Confidence 888999999999974322222222 1222222 23679999999999763211000
Q ss_pred ---CCCCceEEecccccccccccceEeCCCcEEeeeeeccCCCCcceeeEEecccccCCcCCCCCCCcCCCCCCCCceec
Q 004077 345 ---NLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKG 421 (775)
Q Consensus 345 ---~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g 421 (775)
...+++|+|||+
T Consensus 247 d~~~~~~~~IsVgA~----------------------------------------------------------------- 261 (600)
T 3hjr_A 247 DPSNSNFWNLVVSAL----------------------------------------------------------------- 261 (600)
T ss_dssp SGGGGSSSEEEEEEE-----------------------------------------------------------------
T ss_pred cCccccCcceEEeee-----------------------------------------------------------------
Confidence 001122222221
Q ss_pred eEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCccccCCccccEEEEeHHHHHHHHHHHhcCCCceEEEEeceEEe
Q 004077 422 KIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNEYSYDAHYLPATAVLYDDAIKIHEYIKSTNNPTAIIKQARTVL 501 (775)
Q Consensus 422 kivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 501 (775)
T Consensus 262 -------------------------------------------------------------------------------- 261 (600)
T 3hjr_A 262 -------------------------------------------------------------------------------- 261 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCccccccCCCCCCCCCCCCCCceeeCCCcE--------EEcccCCCCCC-------------cccCCccccccEE
Q 004077 502 HTQPAPFMANFTSRGPNALDPYILKPDITAPGLNI--------LAAWSEASSPS-------------KLAFDKRIVKYTI 560 (775)
Q Consensus 502 ~~~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I--------~sa~~~~~~~~-------------~~~~~~~~~~y~~ 560 (775)
...+.++.||++|+.. +++|||..+ .+..++..... ..........|..
T Consensus 262 --~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (600)
T 3hjr_A 262 --NADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGV 331 (600)
T ss_dssp --CTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEE
T ss_pred --cCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceec
Confidence 2246888999999987 899999762 22222211000 0011122356889
Q ss_pred eeccCchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCcccC--------------------CCCCCCCCCc
Q 004077 561 FSGTSMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWMKNNKALPITN--------------------ADGSIATPFS 620 (775)
Q Consensus 561 ~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~--------------------~~~~~~~~~~ 620 (775)
++|||||||||||++|||+|++|+|++++||++|++||++++....|+.. ..........
T Consensus 332 ~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~ 411 (600)
T 3hjr_A 332 MNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPT 411 (600)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTT
T ss_pred cccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccc
Confidence 99999999999999999999999999999999999999999866544220 0111223567
Q ss_pred cceeccCccccCCCCe
Q 004077 621 FGSGHFRPTKAADPGL 636 (775)
Q Consensus 621 ~G~G~vn~~~Al~~~l 636 (775)
||||+||+.+|++.+.
T Consensus 412 yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 412 YGFGLIDVNKALELAA 427 (600)
T ss_dssp TBTCBCCHHHHHHHHT
T ss_pred cCCceecHHHHHHHhh
Confidence 9999999999987543
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=6.5e-25 Score=250.70 Aligned_cols=97 Identities=27% Similarity=0.409 Sum_probs=75.1
Q ss_pred ceeeecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHh---CCceEEEEccCCCCCCCC---CccHHHHHHHH
Q 004077 248 TASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR---DGVHVLSISIGTNQPFAF---NRDGIAIGALN 321 (775)
Q Consensus 248 ~~~GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~---~gvdVIn~SlG~~~~~~~---~~~~~~~a~~~ 321 (775)
.+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||.... .+ ....+..++.+
T Consensus 273 ~~~gvAp~a~i~~~~~~-------------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~-~~~~~~~~~~~~~~~~ 338 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP-------------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPED-SWAPASIAAMNRAFLD 338 (552)
T ss_dssp HHHHHCTTSEEEEEECC-------------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGG-GSCHHHHHHHHHHHHH
T ss_pred hhhccCCCCeEEEEEcC-------------CCCchHHHHHHHHHhcccCCCCEEEecccCCcc-cCCHHHHHHHHHHHHH
Confidence 35799999999999972 245689999999998 799999999998321 11 12356667778
Q ss_pred HHcCCcEEEEecCCCCCCCC--------CCCCCCCceEEeccccc
Q 004077 322 AVKHNILVACSAGNSGPAPS--------SLSNLAPWLITVGAGSL 358 (775)
Q Consensus 322 a~~~Gi~vV~AAGN~G~~~~--------~~~~~~p~vitVgAs~~ 358 (775)
|..+||+||+||||+|.... ..+...|+|++||+++.
T Consensus 339 a~~~Gi~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 339 AAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp HHHTTCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred HHhCCeEEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 88999999999999996532 22345699999999864
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.83 E-value=2.4e-21 Score=210.88 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=77.4
Q ss_pred eecCCCeEEEEEeecCCCCCCccCCCCCCHHHHHHHHHHHHh-CCceEEEEccCCCCCC---CCCccHHHHHHHHHHcCC
Q 004077 251 GGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIR-DGVHVLSISIGTNQPF---AFNRDGIAIGALNAVKHN 326 (775)
Q Consensus 251 GVAP~A~L~~~kv~~~~~~g~~~~~~~~~~~~i~~ai~~a~~-~gvdVIn~SlG~~~~~---~~~~~~~~~a~~~a~~~G 326 (775)
.+||+++++.|++.+.. + +..++++.+|+||++ ++++|||||||..... ....+.+..++.+|..+|
T Consensus 91 ~~aP~a~~~~~~~~~~~--~-------~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~G 161 (372)
T 1ga6_A 91 SAGGAVQQLLFYMADQS--A-------SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQG 161 (372)
T ss_dssp HTTSCEEEEEEEEECTT--S-------STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTT
T ss_pred hcCCCCcEEEEEeCCCC--C-------cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCC
Confidence 57899999999998654 2 677899999999998 8999999999983210 112345667777888999
Q ss_pred cEEEEecCCCCCCCC-------------CCCCCCCceEEecccccc
Q 004077 327 ILVACSAGNSGPAPS-------------SLSNLAPWLITVGAGSLD 359 (775)
Q Consensus 327 i~vV~AAGN~G~~~~-------------~~~~~~p~vitVgAs~~~ 359 (775)
|+||+||||+|...+ ..+...|+|++||+++..
T Consensus 162 itvv~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 162 QTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp CEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred cEEEEEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 999999999996532 122356999999998653
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.87 E-value=3.8e-09 Score=119.75 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=51.5
Q ss_pred HHHHHHHHHH--hCCceEEEEccCCCCCC--CCCccHHHHHHHHHHcCCcEEEEecCCCCCCCC----------CCCCCC
Q 004077 282 DMLAAIDDAI--RDGVHVLSISIGTNQPF--AFNRDGIAIGALNAVKHNILVACSAGNSGPAPS----------SLSNLA 347 (775)
Q Consensus 282 ~i~~ai~~a~--~~gvdVIn~SlG~~~~~--~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~----------~~~~~~ 347 (775)
.++..+++.. .+-++|||||||..... ..+...+...+.++..+||.|++|+||+|.... ..+...
T Consensus 284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~ 363 (544)
T 3edy_A 284 PFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASS 363 (544)
T ss_dssp HHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTC
T ss_pred cHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCC
Confidence 3444444433 35689999999984211 111234455566788899999999999996432 233456
Q ss_pred CceEEeccccc
Q 004077 348 PWLITVGAGSL 358 (775)
Q Consensus 348 p~vitVgAs~~ 358 (775)
|||++||+++.
T Consensus 364 P~VtaVGgT~l 374 (544)
T 3edy_A 364 PYVTTVGGTSF 374 (544)
T ss_dssp TTSEEEEEEEE
T ss_pred CcEEEEeeeec
Confidence 99999999764
No 38
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.79 E-value=2.9e-08 Score=96.51 Aligned_cols=95 Identities=21% Similarity=0.136 Sum_probs=76.8
Q ss_pred CCCCcCCCCCCCCc-------eeceEEEEecCC-cchhhhhhHhhhcCceEEEEecCCCCCCccc----cCCccccEEEE
Q 004077 405 ETNQCLPGSLTPEK-------VKGKIVLCMRGS-GFKLSKGMEVKRAGGVGLILGNSPANGNEYS----YDAHYLPATAV 472 (775)
Q Consensus 405 ~~~~c~~~~~~~~~-------~~gkivl~~~g~-~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~----~~~~~~p~~~i 472 (775)
....|.+..+.... .++||+|++||. |+|.+|.++++++||.++|+||+...+.... .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 45789887653322 578999999999 9999999999999999999999853322221 22357999999
Q ss_pred eHHHHHHHHHHHhcCCCceEEEEeceE
Q 004077 473 LYDDAIKIHEYIKSTNNPTAIIKQART 499 (775)
Q Consensus 473 ~~~~g~~l~~~~~~~~~~~~~i~~~~~ 499 (775)
+..+|+.|++++..+..++++|.....
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~~ 188 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGKK 188 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCCc
Confidence 999999999999999998888887653
No 39
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.69 E-value=1.3e-08 Score=90.97 Aligned_cols=76 Identities=12% Similarity=0.050 Sum_probs=62.3
Q ss_pred CCceEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhhcceEEeeceeEeEEEEEcCHHHHHhhcc--ccceEEecC
Q 004077 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSE--EVVSVYPSH 99 (775)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~~~~l~~~~~~~L~~--~V~~V~~~~ 99 (775)
..+.|||+|++... ......|++|+.+++.+ .....+++|+|++.|+||+++|+++++++|++ +|.+|+||+
T Consensus 36 ip~~YIV~lk~~~~-----~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~ 109 (114)
T 2w2n_P 36 LPGTYVVVLKEETH-----LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDS 109 (114)
T ss_dssp EEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEE
T ss_pred CCCcEEEEECCCCC-----HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCc
Confidence 45799999998772 23455888999987754 22345899999999999999999999999999 999999999
Q ss_pred CCcccc
Q 004077 100 PEKYSL 105 (775)
Q Consensus 100 ~~~~~~ 105 (775)
.++.
T Consensus 110 --~v~~ 113 (114)
T 2w2n_P 110 --SVFA 113 (114)
T ss_dssp --EEEE
T ss_pred --eEec
Confidence 6653
No 40
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.50 E-value=2e-07 Score=77.85 Aligned_cols=72 Identities=17% Similarity=0.199 Sum_probs=54.4
Q ss_pred cCCceEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhhcceEEeeceeEeEEEEEcCHHHHHhhcc--ccceEEec
Q 004077 21 KQKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSE--EVVSVYPS 98 (775)
Q Consensus 21 ~~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~~~~l~~~~~~~L~~--~V~~V~~~ 98 (775)
...+.|||.||++... .. .+..+++. ...++.++|++ |+||+++++++++++|++ +|.+||||
T Consensus 6 ~i~~~YIV~~k~~~~~----~~---~~~~~~~~-------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D 70 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFKS----CA---KKEDVISE-------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEED 70 (80)
T ss_dssp --CCEEEEEECTTCCS----HH---HHHHHHHT-------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEEC
T ss_pred cCCCCEEEEECCCCCh----HH---HHHHHHHH-------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeC
Confidence 3468999999988732 11 12233322 12479999998 999999999999999999 99999999
Q ss_pred CCCcccccccC
Q 004077 99 HPEKYSLQTTR 109 (775)
Q Consensus 99 ~~~~~~~~~~~ 109 (775)
+ .++++++.
T Consensus 71 ~--~v~~~tt~ 79 (80)
T 3cnq_P 71 K--LYRALSAT 79 (80)
T ss_dssp C--EEEECCC-
T ss_pred c--EEEEeeec
Confidence 9 88887654
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.31 E-value=5e-07 Score=81.74 Aligned_cols=76 Identities=12% Similarity=0.050 Sum_probs=57.4
Q ss_pred CCceEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhhcceEEeeceeEeEEEEEcCHHHHHhhcc--ccceEEecC
Q 004077 22 QKQVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYKHSINGFSAVLTPDEAARLSE--EVVSVYPSH 99 (775)
Q Consensus 22 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~~~~l~~~~~~~L~~--~V~~V~~~~ 99 (775)
..+.|||+||++.. ......|.+++..+..+.. ...++.|+|++.|+||++++++++++.|++ +|.+|++++
T Consensus 46 Ip~~YIV~~K~~~~-----~~~~~~~~~~l~~~~~~r~-~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~ 119 (124)
T 2qtw_A 46 LPGTYVVVLKEETH-----LSQSERTARRLQAQAARRG-YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDS 119 (124)
T ss_dssp EEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHHTT-CCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEE
T ss_pred CCCCEEEEECCCCC-----HHHHHHHHHHHHHHHhhcc-cCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCc
Confidence 35799999998873 2334455566655432211 234799999999999999999999999999 999999998
Q ss_pred CCcccc
Q 004077 100 PEKYSL 105 (775)
Q Consensus 100 ~~~~~~ 105 (775)
.++.
T Consensus 120 --~v~a 123 (124)
T 2qtw_A 120 --SVFA 123 (124)
T ss_dssp --EEEE
T ss_pred --eEec
Confidence 6653
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.20 E-value=2.7e-06 Score=70.07 Aligned_cols=67 Identities=16% Similarity=0.275 Sum_probs=54.1
Q ss_pred ceEEEEecCCCCCCcccchhhhhHHHHHHHhhCCchhhhcceEEeec-eeEeEEEEEcCHHHHHhhcc----ccceEEec
Q 004077 24 QVYIVHFGGSDNGEKALHEIQETHHSYLLSVKDNEEEARASHLYSYK-HSINGFSAVLTPDEAARLSE----EVVSVYPS 98 (775)
Q Consensus 24 ~~yiV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~-~~~ng~~~~l~~~~~~~L~~----~V~~V~~~ 98 (775)
+.|||.||++.. ......|.+++...- .++.+.|+ .+|+||+++++++++++|++ .|.+||+|
T Consensus 3 ~sYIV~lk~~~~-----~~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D 70 (76)
T 1v5i_B 3 GKFIVIFKNDVS-----EDKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (76)
T ss_dssp EEEEEEECTTCC-----HHHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred ceEEEEECCCCC-----HHHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence 689999998872 344556777776653 36889994 78999999999999999998 39999999
Q ss_pred CCCccc
Q 004077 99 HPEKYS 104 (775)
Q Consensus 99 ~~~~~~ 104 (775)
+ .++
T Consensus 71 ~--~v~ 74 (76)
T 1v5i_B 71 H--VAH 74 (76)
T ss_dssp C--EEE
T ss_pred c--EEe
Confidence 9 654
No 43
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.67 E-value=0.0042 Score=68.54 Aligned_cols=73 Identities=18% Similarity=0.262 Sum_probs=59.8
Q ss_pred CCCCCceeceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCCc--cc-cCCccccEEEEeHHHHHHHHHHHh
Q 004077 413 SLTPEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGNE--YS-YDAHYLPATAVLYDDAIKIHEYIK 485 (775)
Q Consensus 413 ~~~~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~--~~-~~~~~~p~~~i~~~~g~~l~~~~~ 485 (775)
++...+++|||||++||.|.|..|..+++++||.|+|++++...... .. .....+|...++.+++..|.+++.
T Consensus 107 D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 107 DVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred hcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 44455899999999999999999999999999999999998532211 11 135678999999999999999984
No 44
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.12 E-value=0.0056 Score=48.35 Aligned_cols=40 Identities=18% Similarity=0.241 Sum_probs=35.9
Q ss_pred hcceEEeeceeEeEEEEEcCHHHHHhhcc--ccceEEecCCCccc
Q 004077 62 RASHLYSYKHSINGFSAVLTPDEAARLSE--EVVSVYPSHPEKYS 104 (775)
Q Consensus 62 ~~~i~~~y~~~~ng~~~~l~~~~~~~L~~--~V~~V~~~~~~~~~ 104 (775)
..++.++|.. +++++++||.+.++.|++ +|.+|++|. ..+
T Consensus 22 gG~i~~~~~~-I~a~~~~lp~~~~~~L~~~p~V~yVE~D~--~v~ 63 (65)
T 2z30_B 22 GGHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDH--QAV 63 (65)
T ss_dssp TCEEEEECSS-SSEEEEEECGGGHHHHHTSTTEEEEEECC--EEE
T ss_pred CCEEEEEecC-CcEEEEEeCHHHHHHHhcCCCceEEecCc--EEE
Confidence 4689999977 999999999999999999 999999998 543
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.98 E-value=0.024 Score=62.81 Aligned_cols=82 Identities=18% Similarity=0.245 Sum_probs=61.9
Q ss_pred CCceeceEEEEecCCcc---------hhhh----hhHhhhcCceEEEEecCCCCCC-------c-cccCCccccEEEEeH
Q 004077 416 PEKVKGKIVLCMRGSGF---------KLSK----GMEVKRAGGVGLILGNSPANGN-------E-YSYDAHYLPATAVLY 474 (775)
Q Consensus 416 ~~~~~gkivl~~~g~~~---------~~~k----~~~~~~~Ga~g~i~~n~~~~~~-------~-~~~~~~~~p~~~i~~ 474 (775)
+.+++|||||++|+.|. +..| ..++.++||+|+|++|+..... . .......+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 56899999999998874 4444 3579999999999999743221 1 111245799999999
Q ss_pred HHHHHHHHHHhcCCCceEEEEec
Q 004077 475 DDAIKIHEYIKSTNNPTAIIKQA 497 (775)
Q Consensus 475 ~~g~~l~~~~~~~~~~~~~i~~~ 497 (775)
++++.|...+..+...++++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998877666666544
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.54 E-value=0.015 Score=67.23 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=55.3
Q ss_pred CceeceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCCCC------------------ccc----------------c
Q 004077 417 EKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPANGN------------------EYS----------------Y 462 (775)
Q Consensus 417 ~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~------------------~~~----------------~ 462 (775)
.+++|||||+++|.|.+..|..+++++||.|+|+|++..... ... .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 579999999999999999999999999999999999754210 000 0
Q ss_pred CCccccEEEEeHHHHHHHHHHHh
Q 004077 463 DAHYLPATAVLYDDAIKIHEYIK 485 (775)
Q Consensus 463 ~~~~~p~~~i~~~~g~~l~~~~~ 485 (775)
....||+..|+.+++..|.+.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12368999999999999987543
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.47 E-value=0.016 Score=67.69 Aligned_cols=71 Identities=27% Similarity=0.404 Sum_probs=56.4
Q ss_pred CCceeceEEEEecCCcchhhhhhHhhhcCceEEEEecCCCC----C---------------------------Ccccc--
Q 004077 416 PEKVKGKIVLCMRGSGFKLSKGMEVKRAGGVGLILGNSPAN----G---------------------------NEYSY-- 462 (775)
Q Consensus 416 ~~~~~gkivl~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~----~---------------------------~~~~~-- 462 (775)
..+++|||||+++|.|.+.+|..+|+++||.|+|+|++..+ + ..+.+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 45799999999999999999999999999999999986210 0 00000
Q ss_pred ---------------CCccccEEEEeHHHHHHHHHHHhc
Q 004077 463 ---------------DAHYLPATAVLYDDAIKIHEYIKS 486 (775)
Q Consensus 463 ---------------~~~~~p~~~i~~~~g~~l~~~~~~ 486 (775)
....||++.|+..++..|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 124789999999999999987653
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.19 E-value=0.3 Score=43.51 Aligned_cols=52 Identities=13% Similarity=0.239 Sum_probs=43.4
Q ss_pred CceEEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEEC
Q 004077 684 NGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 740 (775)
Q Consensus 684 ~~~~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~ 740 (775)
..+.+.+++|+|.|..+..|++.... -++++|..-.+ ++|++..++|+|...
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~ 91 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQ 91 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCS
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcC
Confidence 35678899999999999999887643 36678999888 579999999999984
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.04 E-value=0.23 Score=61.09 Aligned_cols=24 Identities=29% Similarity=0.552 Sum_probs=22.7
Q ss_pred CCCCCceEEEEeecCCCCCCCCCC
Q 004077 137 ARYGQDVIVGLVDNGVWPESKSFS 160 (775)
Q Consensus 137 ~~~G~GV~VgVIDtGid~~Hp~f~ 160 (775)
.+.|+||+|||+|||||+.+|-|+
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 689999999999999999999994
No 50
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=86.17 E-value=0.43 Score=52.66 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=26.9
Q ss_pred CCCCccccccCCCCCCCCCCCCCCceeeCCCcEEEcccC
Q 004077 504 QPAPFMANFTSRGPNALDPYILKPDITAPGLNILAAWSE 542 (775)
Q Consensus 504 ~~~~~~a~fSS~GP~~~~d~~~KPDI~APG~~I~sa~~~ 542 (775)
...+.++.||++||.. ||+|||++|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 3467899999999866 999999999999874
No 51
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=86.09 E-value=9.5 Score=33.34 Aligned_cols=53 Identities=13% Similarity=0.054 Sum_probs=43.2
Q ss_pred EEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEECc
Q 004077 687 VIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGS 741 (775)
Q Consensus 687 ~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~~ 741 (775)
-..++.+.|....+.+|++++...+++.+. .+..+++ ++++..++.|.+..+.
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 568889999999999999999987776653 3556777 6799999999998863
No 52
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=83.30 E-value=8 Score=35.05 Aligned_cols=89 Identities=10% Similarity=0.027 Sum_probs=58.6
Q ss_pred ceEEEEEEEEecCCCCeEEEEEeeCC----CCcEEEEecceEEEccCCcEEEEEEEEEECccccccc-CCCceEEEEEEE
Q 004077 685 GTVIVKRTVTNVGGSKSVYFFSAKPP----MGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQG-LTKQYVFGWYRW 759 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~~ty~~~~~~~----~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~g~~~~ 759 (775)
...+-+++++|.|..+.+|++..... ..--++++|..-++ .+|++..++|++.+++...... ....-.+--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 45677889999999999999985421 12236678999888 5799999999998753210000 111223445555
Q ss_pred E-CCccEEEeEEEEEe
Q 004077 760 T-DGLHLVRSPMAVSF 774 (775)
Q Consensus 760 ~-~~~~~v~~P~~~~~ 774 (775)
. .++.+..+|+--.|
T Consensus 122 ~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNY 137 (140)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EeecCCcEEEEEeccc
Confidence 4 55677788876654
No 53
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.01 E-value=5 Score=34.48 Aligned_cols=55 Identities=9% Similarity=0.122 Sum_probs=42.4
Q ss_pred ceEEEEEEEEecCCCCeEEEEEeeC-CCCcEEEEecceEEEccCCcEEEEEEEEEEC
Q 004077 685 GTVIVKRTVTNVGGSKSVYFFSAKP-PMGVSVKANPSILFFDHIGQKKSFTITVRLG 740 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~~ty~~~~~~-~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~ 740 (775)
...+.+++++|.|+.+..|++.... +.+..++++|..-.+ ++|++++++|++...
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~ 81 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSI 81 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECC
Confidence 4577889999999999999984321 112347778998888 569999999999983
No 54
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=71.30 E-value=30 Score=40.28 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=48.7
Q ss_pred ceEEEEEEEEecCCCC--eEEEEEeeCCCCcEEEEecc-------eEEEccCCcEEEEEEEEEECcccccccCCCceE--
Q 004077 685 GTVIVKRTVTNVGGSK--SVYFFSAKPPMGVSVKANPS-------ILFFDHIGQKKSFTITVRLGSETTRQGLTKQYV-- 753 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~--~ty~~~~~~~~g~~~~v~p~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-- 753 (775)
...+++++|||+|+.+ .+..+.+..|.+. + ..|. ++.+ ++||+++++++++..+-..-....+.|+
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~-~-~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~ls~~d~~~~~w~ve 689 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSA-P-RTPPKQLRGFAKLNL-TPGQSGTATFNIRRRDLSYWDTASQKWVVP 689 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTS-S-SCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGGGCEEETTTTEEEEC
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCC-C-CchhHHhhhccccee-CCCCeEEEEEEEcHHHeeeeecCCCeEEEc
Confidence 3578999999999865 4555666665432 1 1232 2334 6899999999998742100011123442
Q ss_pred EEEEEEE--CCccEEEeEEEEEe
Q 004077 754 FGWYRWT--DGLHLVRSPMAVSF 774 (775)
Q Consensus 754 ~g~~~~~--~~~~~v~~P~~~~~ 774 (775)
.|...+. ...+++|+--.|..
T Consensus 690 ~G~y~v~vG~sS~d~~l~~~~~v 712 (713)
T 3zyz_A 690 SGSFGISVGASSRDIRLTSTLSV 712 (713)
T ss_dssp CEEEEEEEESSSSCEEEEEEEEE
T ss_pred CceEEEEEECCCCCcceeEEEEE
Confidence 3665443 34566665444443
No 55
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=62.70 E-value=69 Score=33.81 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=44.3
Q ss_pred ceEEEEEEEEecCCCCeEEEEEeeCCCCcE----EEEecceEEEccCCcEEEEEEEEEECc
Q 004077 685 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVS----VKANPSILFFDHIGQKKSFTITVRLGS 741 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~~ty~~~~~~~~g~~----~~v~p~~~~~~~~~~~~~~~v~~~~~~ 741 (775)
...+-++|++|.|..+.+|++......... ++++|..-++ .+|++.+++|++.+++
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSK 105 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCT
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECH
Confidence 467788899999999999999765332222 6788998888 5799999999998864
No 56
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=58.68 E-value=36 Score=30.16 Aligned_cols=52 Identities=17% Similarity=0.049 Sum_probs=34.8
Q ss_pred CceEEEEEEEEecCCCC-eEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEE
Q 004077 684 NGTVIVKRTVTNVGGSK-SVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 739 (775)
Q Consensus 684 ~~~~t~~~tv~n~~~~~-~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~ 739 (775)
....+++++|+|.|..+ ..|++.+.. .|-.+.-. .+.+ ++|++++|+++...
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 45789999999999754 667776554 34444322 3345 57888887777654
No 57
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=57.67 E-value=63 Score=28.24 Aligned_cols=72 Identities=7% Similarity=-0.098 Sum_probs=44.7
Q ss_pred CCceEEEEEEEEecCCCCe--------EEEEEeeCCCCcEEE---------EecceEEEccCCcEEEEEEEEEECccccc
Q 004077 683 LNGTVIVKRTVTNVGGSKS--------VYFFSAKPPMGVSVK---------ANPSILFFDHIGQKKSFTITVRLGSETTR 745 (775)
Q Consensus 683 ~~~~~t~~~tv~n~~~~~~--------ty~~~~~~~~g~~~~---------v~p~~~~~~~~~~~~~~~v~~~~~~~~~~ 745 (775)
..+...++++|+|.++.+. .|.+.+....|-.|. --....++ ++||+++|+.+... .
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~-----~ 89 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE-----V 89 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS-----C
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC-----C
Confidence 3457889999999997544 445555555555443 11223455 67999999998873 1
Q ss_pred ccCCCceEEEEEEEE
Q 004077 746 QGLTKQYVFGWYRWT 760 (775)
Q Consensus 746 ~~~~~~~~~g~~~~~ 760 (775)
..+..+.+.+.+.-+
T Consensus 90 ~~pG~Ytl~a~l~~~ 104 (120)
T 3isy_A 90 PEPGTYEVKVTFKGR 104 (120)
T ss_dssp CCSEEEEEEEEECCE
T ss_pred CCCccEEEEEEEEee
Confidence 224444467766544
No 58
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=57.36 E-value=46 Score=32.35 Aligned_cols=52 Identities=15% Similarity=0.157 Sum_probs=37.5
Q ss_pred ceEEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEEC
Q 004077 685 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 740 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~ 740 (775)
...+.+++++|.|+.+.+++.... |.-..+...|..+ ++|++..++|+++..
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~~-p~~~~~~~~~~~I---~PG~~g~I~vt~~~~ 70 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVSL-PSFVSLDDRAFRL---QAREPRELNLSLAVP 70 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEEC-CTTEECSCCEEEE---CSSSCEEEEEEECCC
T ss_pred CcceEEEEEEeCCCCceEEEeccC-CCceEeeeCccee---CCCCceEEEEEEcch
Confidence 345678899999999998887533 5555544444444 579999999999873
No 59
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=48.50 E-value=28 Score=40.58 Aligned_cols=66 Identities=23% Similarity=0.423 Sum_probs=42.6
Q ss_pred CCCCCeeEeecC-----CceEEEEEEEEecCCC--CeEEEEEeeCCCCcEEEEecce-------E-EEccCCcEEEEEEE
Q 004077 672 NLNYPSIAIPNL-----NGTVIVKRTVTNVGGS--KSVYFFSAKPPMGVSVKANPSI-------L-FFDHIGQKKSFTIT 736 (775)
Q Consensus 672 ~ln~ps~~~~~~-----~~~~t~~~tv~n~~~~--~~ty~~~~~~~~g~~~~v~p~~-------~-~~~~~~~~~~~~v~ 736 (775)
-|.|.+|...++ .+..+++++|||+|+. ..+-.+.+..|.+- + ..|.. + .+ ++||+++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~-~~P~k~L~gF~kv~~L-~pGes~~V~~~ 673 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGK-I-DKPFQELKAFHKTRLL-NPGESEEVVLE 673 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSS-S-CCCSCEEEEEEECCCB-CTTCEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCC-C-CCchHHhhcccccccC-CCCCeEEEEEE
Confidence 455666654433 3468899999999975 45666777766432 1 12321 2 22 68999999999
Q ss_pred EEEC
Q 004077 737 VRLG 740 (775)
Q Consensus 737 ~~~~ 740 (775)
+...
T Consensus 674 l~~~ 677 (721)
T 2x41_A 674 IPVR 677 (721)
T ss_dssp EEGG
T ss_pred ECHH
Confidence 9874
No 60
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=47.39 E-value=80 Score=27.39 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=40.7
Q ss_pred EEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEE
Q 004077 687 VIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 739 (775)
Q Consensus 687 ~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~ 739 (775)
.+.+++|+|.++....|++.-..|.- ..|+|..=.+ .+|++.++.|+.+.
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~ 74 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLP 74 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECS
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCC
Confidence 36788999999999999999887755 4567887656 67999999998886
No 61
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=47.33 E-value=56 Score=28.73 Aligned_cols=52 Identities=12% Similarity=0.150 Sum_probs=42.6
Q ss_pred ceEEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEE
Q 004077 685 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 739 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~ 739 (775)
...+-.++|+|.++...-|++.-..|.- ..|.|..=.+ .++++.++.|+++.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~ 78 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQP 78 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECc
Confidence 4567789999999999999999888754 5567887666 67999999999876
No 62
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=45.69 E-value=40 Score=39.97 Aligned_cols=157 Identities=19% Similarity=0.219 Sum_probs=83.9
Q ss_pred ccEEeeccCchhhHHHHHHHHHHHhCCCCC-HHHHHHHHHhcccccCCCCCcccCCC---CCCC-CCCccceeccCcccc
Q 004077 557 KYTIFSGTSMSCPHVAAAAALLKAIHPDWS-SAAIRSALMTTAWMKNNKALPITNAD---GSIA-TPFSFGSGHFRPTKA 631 (775)
Q Consensus 557 ~y~~~sGTSmAaP~VAG~aALl~q~~P~~s-~~~ik~~L~~TA~~~~~~g~~~~~~~---~~~~-~~~~~G~G~vn~~~A 631 (775)
-...++|..++-|.+.-+.|+|..++|.-- ...|-++|.--..|-... |++-.. ..+. .++....|+
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkL--P~T~p~~~~d~P~~~~~~~~~g~------ 689 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKL--SLSWPFKLQDNPAFLNFKTEFGR------ 689 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCC--SSCBCSSGGGSTTTTSCSCBTTE------
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCC--ceeeeCchhhCCccccCCCCCCc------
Confidence 456788888888888888889999998765 577888887666543211 111000 0010 011000111
Q ss_pred CCCCeeeecch-hhHHHhhhcCCCCCCCCcccCCCCCCCCCCCCCCeeEee--cC---CceEEEEEEEEecC-CCC--eE
Q 004077 632 ADPGLVYDASY-EDYLLYLCSHGFSFTNPVFRCPNKPPSALNLNYPSIAIP--NL---NGTVIVKRTVTNVG-GSK--SV 702 (775)
Q Consensus 632 l~~~lv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~--~~---~~~~t~~~tv~n~~-~~~--~t 702 (775)
..|.... -.|.-|.... +...-+=.+-|.|.+|... ++ .+..+++++|||+| +.+ .+
T Consensus 690 ----~~y~eg~~vgYR~y~~~~----------~~plfPFG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eV 755 (845)
T 3abz_A 690 ----VIYGEDIFVGYRYYEKLQ----------RKVAFPFGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEV 755 (845)
T ss_dssp ----EECTTTTCCTHHHHHHHT----------CCCSBCTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEE
T ss_pred ----eeccCCccCCCcchhcCC----------CceeecccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCccee
Confidence 1222210 1233222100 0000000235677777666 43 35689999999999 654 44
Q ss_pred EEEEeeCCCCcEEEEecc-------eEEEccCCcEEEEEEEEE
Q 004077 703 YFFSAKPPMGVSVKANPS-------ILFFDHIGQKKSFTITVR 738 (775)
Q Consensus 703 y~~~~~~~~g~~~~v~p~-------~~~~~~~~~~~~~~v~~~ 738 (775)
-.+.+..|.+. + ..|. .+.+ ++||++++++++.
T Consensus 756 vQlYv~~~~~~-~-~~P~k~L~gF~kv~L-~pGes~~V~~~l~ 795 (845)
T 3abz_A 756 VQVYFSALNSK-V-SRPVKELKGFEKVHL-EPGEKKTVNIDLE 795 (845)
T ss_dssp EEEEEEESSCS-S-CCCSCEEEEEEEEEE-CTTCEEEEEEEEE
T ss_pred eeeeEeCCCCC-c-chhhheeccceeEEE-CCCCEEEEEEEeC
Confidence 45556554321 1 1232 2334 6899999999998
No 63
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=43.70 E-value=82 Score=26.95 Aligned_cols=49 Identities=18% Similarity=0.184 Sum_probs=40.1
Q ss_pred EEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEE
Q 004077 688 IVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 739 (775)
Q Consensus 688 t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~ 739 (775)
+-+++|+|.++....|++.-..|.- ..|+|..=.+ .+|++.++.|+.+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCC
Confidence 4688999999999999999887754 4567887666 67999999998876
No 64
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=43.01 E-value=2e+02 Score=27.67 Aligned_cols=52 Identities=15% Similarity=0.048 Sum_probs=34.3
Q ss_pred ceEEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEE
Q 004077 685 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 739 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~ 739 (775)
...+.+++++|.|..+...+-. ...-|...- +...-.+ ++||+.+++|+++.
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~v-~~scgct~~-~~~~~~i-~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHSV-TTRNPALTA-VPDRTEI-KPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEEE-EECSTTEEE-EESCSEE-CTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCEEEEEE-EeCCCCEee-ecCCccC-CCCCEEEEEEEEec
Confidence 4577889999999988776422 222343332 2222234 67999999999987
No 65
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=42.39 E-value=59 Score=28.57 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=41.6
Q ss_pred eEEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEE
Q 004077 686 TVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRL 739 (775)
Q Consensus 686 ~~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~ 739 (775)
..+-.++|+|.++...-|++....|.-. .|.|..=.+ .++++..+.|+++.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEE-CCCCEEEEEEEecC
Confidence 3556789999999999999998888654 467887766 57999999998877
No 66
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=42.19 E-value=57 Score=29.77 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=42.4
Q ss_pred eEEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEEC
Q 004077 686 TVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 740 (775)
Q Consensus 686 ~~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~ 740 (775)
..+-.++|+|..+....|++.-..|.- ..|.|..=.+ .++++.++.|+++..
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 345689999999999999999888854 4567888766 679999999998763
No 67
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=34.80 E-value=68 Score=28.98 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=42.3
Q ss_pred ceEEEEEEEEecCCCCeEEEEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEEC
Q 004077 685 GTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 740 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~~ty~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~ 740 (775)
...+-.++|+|..+...-|++.-..|.- ..|.|..=.+ .++++..+.|+++..
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 3456678999999999999999888865 4467887655 679999999998763
No 68
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=32.27 E-value=33 Score=25.98 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=27.3
Q ss_pred CchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccc
Q 004077 565 SMSCPHVAAAAALLKAIHPDWSSAAIRSALMTTAWM 600 (775)
Q Consensus 565 SmAaP~VAG~aALl~q~~P~~s~~~ik~~L~~TA~~ 600 (775)
|-..|..--.+..|++.+|+++...|+..|...-..
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 334444555677899999999999999999876543
No 69
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=30.26 E-value=2.8e+02 Score=30.92 Aligned_cols=63 Identities=19% Similarity=0.193 Sum_probs=41.7
Q ss_pred CCCeeEeecCCceEEEEEEEEecCCCCeEE-EEEeeCCCCcEEEEecceEEEccCCcEEEEEEEEEEC
Q 004077 674 NYPSIAIPNLNGTVIVKRTVTNVGGSKSVY-FFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLG 740 (775)
Q Consensus 674 n~ps~~~~~~~~~~t~~~tv~n~~~~~~ty-~~~~~~~~g~~~~v~p~~~~~~~~~~~~~~~v~~~~~ 740 (775)
..|.+++.. .++.+++++|+|-+..+..- ++++..|.+.+++. ....+ ++|++.++.++|+.+
T Consensus 363 ~~~~~~~~~-g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~ 426 (601)
T 1w8o_A 363 TIPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVP 426 (601)
T ss_dssp ECCCEEECT-TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECC
T ss_pred cCccceecC-CceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecC
Confidence 346666653 35788999999976543221 34455678888775 23444 568898998888885
No 70
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=27.65 E-value=1.7e+02 Score=24.90 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCeeEeecCCceEEEEEEEEecCCCCeEEEEEee---CCCCcEEEEecceEEEccCCc-EEEEEEEEEE
Q 004077 675 YPSIAIPNLNGTVIVKRTVTNVGGSKSVYFFSAK---PPMGVSVKANPSILFFDHIGQ-KKSFTITVRL 739 (775)
Q Consensus 675 ~ps~~~~~~~~~~t~~~tv~n~~~~~~ty~~~~~---~~~g~~~~v~p~~~~~~~~~~-~~~~~v~~~~ 739 (775)
-+++.+.+-.+..+++++.+.-.....+...... +..|....-...+|+|. +|| +++|+|.+.-
T Consensus 9 ~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~-~Get~k~i~V~I~d 76 (114)
T 3e9t_A 9 PGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFP-PGVDEQRFRIEVID 76 (114)
T ss_dssp SSEEEEETTCCEEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBCC
T ss_pred CCEEEEEcCCeEEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEcceEEEEe-CCcEEEEEEEEEEc
Confidence 3456666544555444444432222322222211 33455554445689995 465 4666666544
No 71
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=27.33 E-value=2.8e+02 Score=23.42 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=24.1
Q ss_pred ceEEEEEEEEecCCCC-eEEEEEeeCCCCcEEE
Q 004077 685 GTVIVKRTVTNVGGSK-SVYFFSAKPPMGVSVK 716 (775)
Q Consensus 685 ~~~t~~~tv~n~~~~~-~ty~~~~~~~~g~~~~ 716 (775)
+-.+.+++|+|.|..+ ..|++...-|.|..|+
T Consensus 15 ~Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it 47 (107)
T 3ndz_E 15 SGASVNVTIKNNGTTPINGWTLKWTMPINQTIT 47 (107)
T ss_dssp SEEEEEEEEEECSSSCEESCEEEEECCTTEEEE
T ss_pred CCEEEEEEEEeCCCCcccCcEEEEEcCCCCEEe
Confidence 4477889999999765 4588888888766554
No 72
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=26.61 E-value=14 Score=32.32 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=31.2
Q ss_pred EEEEEEEecCCCCeEEEEEee-CCCCcEEEEecceEEEc-cCCcEEEEEEEEEE
Q 004077 688 IVKRTVTNVGGSKSVYFFSAK-PPMGVSVKANPSILFFD-HIGQKKSFTITVRL 739 (775)
Q Consensus 688 t~~~tv~n~~~~~~ty~~~~~-~~~g~~~~v~p~~~~~~-~~~~~~~~~v~~~~ 739 (775)
.+.+-|+|.+....+..+.+. .|.|++++++|..+++. ....+++|.|++..
T Consensus 56 ~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 56 EVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp EEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 344445555532233334455 57899999999987764 33445677666555
No 73
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=25.91 E-value=50 Score=30.31 Aligned_cols=31 Identities=23% Similarity=0.211 Sum_probs=26.2
Q ss_pred eeccCchhhHHHHHHHHHHHhCCCCCHHHHHH
Q 004077 561 FSGTSMSCPHVAAAAALLKAIHPDWSSAAIRS 592 (775)
Q Consensus 561 ~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~ 592 (775)
+.|-| =|+.|-|++||+.+.+-..+|++|.+
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 33555 47999999999999999999999875
No 74
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=22.05 E-value=48 Score=29.92 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=27.8
Q ss_pred EEeeccCchhhHHHHHHHHHHHhCCCCCHHHHHH
Q 004077 559 TIFSGTSMSCPHVAAAAALLKAIHPDWSSAAIRS 592 (775)
Q Consensus 559 ~~~sGTSmAaP~VAG~aALl~q~~P~~s~~~ik~ 592 (775)
..+.|-| =|+.|-|++||+.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4555666 47999999999999999999999865
No 75
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=20.34 E-value=2.6e+02 Score=24.02 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=16.5
Q ss_pred CceEEEEEEEEecCCC-CeEEEEEe
Q 004077 684 NGTVIVKRTVTNVGGS-KSVYFFSA 707 (775)
Q Consensus 684 ~~~~t~~~tv~n~~~~-~~ty~~~~ 707 (775)
....+++.+|+|.|.. ...+++.+
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~l 42 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSL 42 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEE
Confidence 4578999999999963 23344443
Done!