BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004081
(775 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H1U4|APC5_ARATH Anaphase-promoting complex subunit 5 OS=Arabidopsis thaliana
GN=APC5 PE=2 SV=1
Length = 916
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/762 (66%), Positives = 614/762 (80%), Gaps = 7/762 (0%)
Query: 2 QGVCHLLTSIGIYCKEALSSCSAYELPCLDDSSNELEALSEYENMDLENIVFEKVNKEIE 61
+GVCHL +SI YCKEA SS + + P +N LE+L +Y+ MD+EN +K +EIE
Sbjct: 151 EGVCHLFSSIEDYCKEAHSSFAQFGAP-----NNNLESLIQYDQMDMENYAMDKPTEEIE 205
Query: 62 ARKKASEEVSFHLHAPKALFGLVEDIKVSAVSKSQGGDKCREASPSAHAPNDAMREFDSI 121
+K AS V FHLH P +L E + + S+ K EA+P A A + E
Sbjct: 206 FQKTASGIVPFHLHTPDSLMKATEGLLHNRKETSRTSKKDTEATPVARASTSTLEESLVD 265
Query: 122 SGAFLRTNWQMQGYLMEQADAIEKHGSSFSLNAFELI--LRQLQKLAPELHRVHFLRYLN 179
FLRTN Q+QG+LMEQADAIE HGSS S ++ + L QLQKLAPELHRVHFLRYLN
Sbjct: 266 ESLFLRTNLQIQGFLMEQADAIEIHGSSSSFSSSSIESFLDQLQKLAPELHRVHFLRYLN 325
Query: 180 SLYHDDYFAALENLHRYFDYSAGTEGFDFAQPSIGCNSFGRYEIALLCLGMMHFHFGHPK 239
L+ DDYFAAL+NL RYFDYSAGTEGFD PS GC+ +GRYEI LLCLGMMHF FGHP
Sbjct: 326 KLHSDDYFAALDNLLRYFDYSAGTEGFDLVPPSTGCSMYGRYEIGLLCLGMMHFRFGHPN 385
Query: 240 QALDVLTEAVCLSQQHSNDTCLAYTLAAISNLLSEIGISTTTGILGSSYSPITSIGTTLS 299
AL+VLTEAV +SQQ SNDTCLAYTLAA+SNLLSE+GI++T+G+LGSSYSP+TS ++LS
Sbjct: 386 LALEVLTEAVRVSQQLSNDTCLAYTLAAMSNLLSEMGIASTSGVLGSSYSPVTSTASSLS 445
Query: 300 VQQQLFVLLKESFRRAESLKLKRLVAANHLAMAKFDLTHVQRPLLSFGPKTAMRLRTCPT 359
VQQ++++LLKES RRA+SLKL+RLVA+NHLAMAKF+L HVQRPLLSFGPK +MR +TCP
Sbjct: 446 VQQRVYILLKESLRRADSLKLRRLVASNHLAMAKFELMHVQRPLLSFGPKASMRHKTCPV 505
Query: 360 NVCKELRLASHLISDFVSESSTMTTDGAFSTSWLKNLQKPMGSLVLTQENVSGKDSNAFQ 419
+VCKE+RL +HLISDF SESSTMT DG+ S++WLK+LQKP G V++ ++ S K S FQ
Sbjct: 506 SVCKEIRLGAHLISDFSSESSTMTIDGSLSSAWLKDLQKPWGPPVISPDSGSRKSSTFFQ 565
Query: 420 FCAQPSSIPGSVLQLVGSSYLLRATAWEAYGSAPLTRVNTLIYATCFSDGSSLSDAALAH 479
C SIPGSV QL+G+SYLLRAT+WE YGSAP+ R+NTL+YAT F D SS SDA LA+
Sbjct: 566 LCDHLVSIPGSVSQLIGASYLLRATSWELYGSAPMARMNTLVYATLFGDSSSSSDAELAY 625
Query: 480 VKLIQHLAVFKGYKEAFSALKIAEEKFLSVSKSRILLLKLQLLHERSLHRGHLKLAQKVC 539
+KLIQHLA++KGYK+AF+ALK+AEEKFL+VSKS++LLLKLQLLHER+LH G+LKLAQ++C
Sbjct: 626 LKLIQHLALYKGYKDAFAALKVAEEKFLTVSKSKVLLLKLQLLHERALHCGNLKLAQRIC 685
Query: 540 DELGVMASSVTGVDMDLKTEASLRHARTLLAANQFSEAAAVAHSLFCMCYKFNLQVENAS 599
+ELG +AS+ GVDM+LK EASLR ARTLLAA Q+S+AA VAHSLFC C+KFNLQ+E AS
Sbjct: 686 NELGGLASTAMGVDMELKVEASLREARTLLAAKQYSQAANVAHSLFCTCHKFNLQIEKAS 745
Query: 600 VLLLLAEIHKKSGNAVLGIPYALASLSFCQLLNLDLLKASATLTLAELWLSFGPNHAKMA 659
VLLLLAEIHKKSGNAVLG+PYALAS+SFCQ NLDLLKASATLTLAELWL G NH K A
Sbjct: 746 VLLLLAEIHKKSGNAVLGLPYALASISFCQSFNLDLLKASATLTLAELWLGLGSNHTKRA 805
Query: 660 SNLIQQALPLILGHGGLELRARAFIAEAKCLLSDPSFSVSQNPEAVLDPLRQASEELQVL 719
+L+ A P+ILGHGGLELRARA+I EA C LSDPS SVS + + VLD LRQAS+ELQ L
Sbjct: 806 LDLLHGAFPMILGHGGLELRARAYIFEANCYLSDPSSSVSTDSDTVLDSLRQASDELQAL 865
Query: 720 EDHELAAEAFYLIAIVFDKLGRLAEREEAAALFKEYVLALEN 761
E HELAAEA YL+A+V+DKLGRL EREEAA+LFK++++ALEN
Sbjct: 866 EYHELAAEASYLMAMVYDKLGRLDEREEAASLFKKHIIALEN 907
>sp|Q5RE52|APC5_PONAB Anaphase-promoting complex subunit 5 OS=Pongo abelii GN=ANAPC5 PE=2
SV=1
Length = 755
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 156/374 (41%), Gaps = 41/374 (10%)
Query: 404 VLTQENVSGKDSNAFQFCAQPSSI---PGSVLQLVGSSYLLRATAWEAYGSAP------- 453
++ Q +GK +N + S + S+ +L+ S + W YG +
Sbjct: 384 LVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQ 443
Query: 454 -LTRVNTLIYATCFSDGSSLSDAALAHVKLIQHLAVFKGYKEAFSA----LKIAEEKFLS 508
L +N+L ++ A+A + HLA + F+A LK +E+F
Sbjct: 444 MLLSMNSLEAVNAGVQQNNTESFAVA----LCHLAELHAEQGCFAAASEVLKHLKERFPP 499
Query: 509 VSKSRILLL----KLQLLHERSLHRGHLKLAQKVCDELGVMASSVTGVDMDLKTEASLRH 564
S+ L + K+Q +R+++ G LA S VTG+ E R
Sbjct: 500 NSQHAQLWMLCDQKIQF--DRAMNDGKYHLAD----------SLVTGITALNSIEGVYRK 547
Query: 565 ARTLLAANQFSEAAAVAHSLFCMCYKFNLQVENASVLLLLAEIHKKSGNAVLGIPYALAS 624
A L A NQ SEA + L C K SVLL +AE++ +S + + +P L +
Sbjct: 548 AVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQA 607
Query: 625 LSFCQLLNLDLLKASATLTLAELWLSFGPNHAKMASNLIQQALPLILGHGGLELRARAFI 684
L+ + L L + L LA L G + A +L+ A+ IL G + + RA
Sbjct: 608 LALSKEYRLQYLASETVLNLAFAQLILGI--PEQALSLLHMAIEPILADGAILDKGRAMF 665
Query: 685 AEAKC-LLSDPSFSVSQNPEAV---LDPLRQASEELQVLEDHELAAEAFYLIAIVFDKLG 740
AKC + S S+ + EA+ ++ L +A ++ E + Y A ++ LG
Sbjct: 666 LVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLG 725
Query: 741 RLAEREEAAALFKE 754
+ ER A LF++
Sbjct: 726 KTQERNRCAMLFRQ 739
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 84 VEDIKVSAVSKSQGGDKCREASPSAHAPNDAMREFD-SISGAFLRTNWQMQGYLMEQADA 142
VED + S+ +G K + ++RE + S SG + Q + +L +QA
Sbjct: 170 VEDADMELTSRDEGERKMEKEELDV-----SVREEEVSCSGPL--SQKQAEFFLSQQASL 222
Query: 143 IEKHGS-SFSLNAFELILRQLQKLAPELHRVHFLRYLNSLYHDDYFAALENLHRYFD--Y 199
++ + + + + + L L K P+ H+L YLN+L D F++ +L YFD
Sbjct: 223 LKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLI 282
Query: 200 SAGTEGFDFAQPSIGCNSFGR-YEIALLCLGMMHFHFGHPKQALDVLTEAVCLSQQHSND 258
G E S G +GR A L L +H FGH +QA L EA+ ++Q+ ++
Sbjct: 283 LTGAES-----KSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDH 337
Query: 259 TCLAYTLA 266
CL + L+
Sbjct: 338 VCLQHCLS 345
>sp|Q9UJX4|APC5_HUMAN Anaphase-promoting complex subunit 5 OS=Homo sapiens GN=ANAPC5 PE=1
SV=2
Length = 755
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 156/374 (41%), Gaps = 41/374 (10%)
Query: 404 VLTQENVSGKDSNAFQFCAQPSSI---PGSVLQLVGSSYLLRATAWEAYGSAP------- 453
++ Q +GK +N + S + S+ +L+ S + W YG +
Sbjct: 384 LVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQ 443
Query: 454 -LTRVNTLIYATCFSDGSSLSDAALAHVKLIQHLAVFKGYKEAFSA----LKIAEEKFLS 508
L +N+L ++ A+A + HLA + F+A LK +E+F
Sbjct: 444 MLLSMNSLEAVNAGVQQNNTESFAVA----LCHLAELHAEQGCFAAASEVLKHLKERFPP 499
Query: 509 VSKSRILLL----KLQLLHERSLHRGHLKLAQKVCDELGVMASSVTGVDMDLKTEASLRH 564
S+ L + K+Q +R+++ G LA S VTG+ E R
Sbjct: 500 NSQHAQLWMLCDQKIQF--DRAMNDGKYHLAD----------SLVTGITALNSIEGVYRK 547
Query: 565 ARTLLAANQFSEAAAVAHSLFCMCYKFNLQVENASVLLLLAEIHKKSGNAVLGIPYALAS 624
A L A NQ SEA + L C K SVLL +AE++ +S + + +P L +
Sbjct: 548 AVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQA 607
Query: 625 LSFCQLLNLDLLKASATLTLAELWLSFGPNHAKMASNLIQQALPLILGHGGLELRARAFI 684
L+ + L L + L LA L G + A +L+ A+ IL G + + RA
Sbjct: 608 LALSKEYRLQYLASETVLNLAFAQLILGI--PEQALSLLHMAIEPILADGAILDKGRAMF 665
Query: 685 AEAKC-LLSDPSFSVSQNPEAV---LDPLRQASEELQVLEDHELAAEAFYLIAIVFDKLG 740
AKC + S S+ + EA+ ++ L +A ++ E + Y A ++ LG
Sbjct: 666 LVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLG 725
Query: 741 RLAEREEAAALFKE 754
+ ER A LF++
Sbjct: 726 KTQERNRCAMLFRQ 739
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 84 VEDIKVSAVSKSQGGDKCREASPSAHAPNDAMREFD-SISGAFLRTNWQMQGYLMEQADA 142
VED + S+ +G K + ++RE + S SG + Q + +L +QA
Sbjct: 170 VEDADMELTSRDEGERKMEKEELDV-----SVREEEVSCSGPL--SQKQAEFFLSQQASL 222
Query: 143 IEKHGS-SFSLNAFELILRQLQKLAPELHRVHFLRYLNSLYHDDYFAALENLHRYFD--Y 199
++ + + + + + L L K P+ H+L YLN+L D F++ +L YFD
Sbjct: 223 LKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLI 282
Query: 200 SAGTEGFDFAQPSIGCNSFGR-YEIALLCLGMMHFHFGHPKQALDVLTEAVCLSQQHSND 258
G E S G +GR A L L +H FGH +QA L EA+ ++Q+ ++
Sbjct: 283 LTGAES-----KSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDH 337
Query: 259 TCLAYTLA 266
CL + L+
Sbjct: 338 VCLQHCLS 345
>sp|A1L1K3|APC5_RAT Anaphase-promoting complex subunit 5 OS=Rattus norvegicus GN=Anapc5
PE=2 SV=1
Length = 727
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 163/401 (40%), Gaps = 56/401 (13%)
Query: 391 SWLKNL-QKPMGSLVLTQENV------------SGKDSNAFQFCAQPSSI---PGSVLQL 434
SWL L QK S VL + +V +GK +N + S + S+ +L
Sbjct: 330 SWLYVLGQKRADSYVLLEHSVKKAVHFGLPRAFAGKTANKLMDALKDSDLLHWKHSLSEL 389
Query: 435 VGSSYLLRATAWEAYGSAP--------LTRVNTLIYATCFSDGSSLSDAALAHVKLIQHL 486
+ S + W YG + L +N+L S G ++ V L HL
Sbjct: 390 IDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSL---ESLSAGVQQNNTESFAVALC-HL 445
Query: 487 AVFKGYKEAFSA----LKIAEEKFLSVSKSRILLL----KLQLLHERSLHRGHLKLAQKV 538
A + F+A LK +E+F S+ L + K+Q +R+++ G LA
Sbjct: 446 AELHAEQGCFAAAGEVLKHLKERFPPNSQHAQLWMLCDQKIQF--DRAMNDGKFHLAD-- 501
Query: 539 CDELGVMASSVTGVDMDLKTEASLRHARTLLAANQFSEAAAVAHSLFCMCYKFNLQVENA 598
S VTG+ E R A L A NQ +EA + L C K
Sbjct: 502 --------SLVTGITALNGIEGVYRKAVVLQAQNQMTEAHKLLQKLLTYCQKLKNTEMVI 553
Query: 599 SVLLLLAEIHKKSGNAVLGIPYALASLSFCQLLNLDLLKASATLTLAELWLSFGPNHAKM 658
SVLL +AE++ +S + + +P L +L+ + L L + L LA L G +
Sbjct: 554 SVLLSVAELYWRSSSPTIAMPVLLEALALSKEYRLQYLASETVLNLAYAQLILGI--PEQ 611
Query: 659 ASNLIQQALPLILGHGGLELRARAFIAEAKCLLS-----DPSFSVSQNPEAVLDPLRQAS 713
A L+ A+ IL G + + RA +KC ++ DP ++ EA + L +A
Sbjct: 612 ALTLLHMAIEPILADGAILDKGRAMFLVSKCQVASAASYDP-VKKAEALEAAIQNLTEAK 670
Query: 714 EELQVLEDHELAAEAFYLIAIVFDKLGRLAEREEAAALFKE 754
++ E + Y A ++ LG+ ER A +F++
Sbjct: 671 NYFAKVDCRERIRDVSYFQARLYHALGKTQERNHCAMVFRQ 711
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 89/207 (42%), Gaps = 44/207 (21%)
Query: 159 LRQLQKLAPELHRVHFLRYLNSLYHDDYFAALENLHRYFD--YSAGTEGFDFAQPSIGCN 216
L L K P+ H+L YLN+L D F++ +L YFD G EG S G
Sbjct: 225 LNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAEG-----KSNGEE 279
Query: 217 SFGR-YEIALLCLGMMHFHFGHPKQALDVLTEAVCLSQQHSNDTCLAYTLAAISNLLSEI 275
+GR A L L +H FGH +QA L EA+ ++Q+ ++ CL + L+ +
Sbjct: 280 GYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLY------ 333
Query: 276 GISTTTGILGSSYSPITSIGTTLSVQQQLFVLLKESFRRAESLKLKRLVA---ANHL--A 330
+LG + +VLL+ S ++A L R A AN L A
Sbjct: 334 -------VLGQKRADS-------------YVLLEHSVKKAVHFGLPRAFAGKTANKLMDA 373
Query: 331 MAKFDLTHVQRPL-----LSFGPKTAM 352
+ DL H + L +S KTA+
Sbjct: 374 LKDSDLLHWKHSLSELIDISIAQKTAI 400
>sp|Q8BTZ4|APC5_MOUSE Anaphase-promoting complex subunit 5 OS=Mus musculus GN=Anapc5 PE=2
SV=1
Length = 740
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 154/375 (41%), Gaps = 43/375 (11%)
Query: 404 VLTQENVSGKDSNAFQFCAQPSSI---PGSVLQLVGSSYLLRATAWEAYGSAP------- 453
++ Q +GK +N + S + S+ +L+ S + W YG +
Sbjct: 369 LVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQ 428
Query: 454 -LTRVNTLIYATCFSDGSSLSDAALAHVKLIQHLAVFKGYKEAFSA----LKIAEEKFLS 508
L +N+L ++ A+A + HLA + F+A LK +++F
Sbjct: 429 MLLSMNSLESLNAGVQQNNTESFAVA----LCHLAELHAEQGCFAAAGEVLKHLKDRFPP 484
Query: 509 VSKSRILLL----KLQLLHERSLHRGHLKLAQKVCDELGVMASSVTGVDMDLKTEASLRH 564
S+ L + K+Q +R+++ G LA S VTG+ E R
Sbjct: 485 NSQHAQLWMLCDQKIQF--DRAMNDGKFHLAD----------SLVTGITALNGIEGVYRK 532
Query: 565 ARTLLAANQFSEAAAVAHSLFCMCYKFNLQVENASVLLLLAEIHKKSGNAVLGIPYALAS 624
A L A NQ +EA + L C K SVLL +AE++ +S + + +P L +
Sbjct: 533 AVVLQAQNQMTEAHKLLQKLLTYCQKLKNTEMVISVLLSVAELYWRSSSPTIAMPVLLEA 592
Query: 625 LSFCQLLNLDLLKASATLTLAELWLSFGPNHAKMASNLIQQALPLILGHGGLELRARAFI 684
L+ + L L + L LA L G + A L+ A+ IL G + + RA
Sbjct: 593 LALSKEYRLQYLASETVLNLAYAQLILGI--PEQALTLLHMAIEPILADGAVLDKGRAMF 650
Query: 685 AEAKCLLS-----DPSFSVSQNPEAVLDPLRQASEELQVLEDHELAAEAFYLIAIVFDKL 739
+KC ++ DP ++ EA + L +A ++ E + Y A ++ L
Sbjct: 651 LVSKCQVASAASYDP-VKKAEALEAAIQNLSEAKNYFAQVDCRERIRDVAYFQARLYHAL 709
Query: 740 GRLAEREEAAALFKE 754
G+ ER A +F++
Sbjct: 710 GKTQERNHCAMIFRQ 724
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 159 LRQLQKLAPELHRVHFLRYLNSLYHDDYFAALENLHRYFD--YSAGTEGFDFAQPSIGCN 216
L L K P+ H+L YLN+L D F++ +L YFD G EG S G
Sbjct: 225 LNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAEG-----KSNGEE 279
Query: 217 SFGR-YEIALLCLGMMHFHFGHPKQALDVLTEAVCLSQQHSNDTCLAYTLA 266
+GR A L L +H FGH +QA L EA+ ++Q+ ++ CL + L+
Sbjct: 280 GYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLS 330
>sp|Q5ZKK3|APC5_CHICK Anaphase-promoting complex subunit 5 OS=Gallus gallus GN=ANAPC5
PE=2 SV=1
Length = 756
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 153/368 (41%), Gaps = 29/368 (7%)
Query: 404 VLTQENVSGKDSNAFQFCAQPSSI---PGSVLQLVGSSYLLRATAWEAYG--SAPLTRVN 458
++ Q +GK +N + S + S+ +L+ S + W YG + L +
Sbjct: 384 LVQQRAFAGKAANKLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQ 443
Query: 459 TLIYATCFS--DGSSLSDAALAHVKLIQHLAVFKGYKEAFSA----LKIAEEKFLSVSKS 512
TL+ + + A ++ HLA + F+A LK +E+F S+
Sbjct: 444 TLLSMNSLEAVNVGVQQNNTEAFAVVLCHLAELHAEQGYFAAASEILKHLKERFPPNSQH 503
Query: 513 RIL--LLKLQLLHERSLHRGHLKLAQKVCDELGVMASSVTGVDMDLKTEASLRHARTLLA 570
L L ++ ER+++ G +A S V G+ E R A L A
Sbjct: 504 AQLWMLFDQKIQFERAMNDGRYHIAD----------SLVAGITALNSIEGMYRKAIVLKA 553
Query: 571 ANQFSEAAAVAHSLFCMCYKFNLQVENASVLLLLAEIHKKSGNAVLGIPYALASLSFCQL 630
NQ EA + L C + SVLL +AE++ +S + +P L +L+F +
Sbjct: 554 QNQMLEAHKLLQKLLIHCQEIKNTEIVISVLLSVAELYWRSSCHTIALPVLLQALAFSRE 613
Query: 631 LNLDLLKASATLTLAELWLSFGPNHAKMASNLIQQALPLILGHGGLELRARAFIAEAKC- 689
+L L + L LA L G + N++ A+ L HG + + A AKC
Sbjct: 614 YSLQYLASETVLNLAFSQLILGV--PEQVLNILHMAIEPGLAHGAVLDKGCAMFLVAKCQ 671
Query: 690 LLSDPSFSVSQNPEAV---LDPLRQASEELQVLEDHELAAEAFYLIAIVFDKLGRLAERE 746
+ S S+S + EA+ + L +A L ++ E + Y A +F LG+ ER
Sbjct: 672 VASTASYSQQKKAEALESAILNLNEAKTYLAKVDCKEQLRDVLYFQARLFHTLGKTQERN 731
Query: 747 EAAALFKE 754
+ A LF++
Sbjct: 732 KCAMLFRQ 739
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 135 YLMEQADAIEKHGSSFSLNAFELI--LRQLQKLAPELHRVHFLRYLNSLYHDDYFAALEN 192
Y + Q ++ K+ + +L+ L L L K P+ H+L YLNSL D F++ +
Sbjct: 214 YFLSQQASLLKNDETKALSPVSLQKELNNLLKFNPDFAEAHYLSYLNSLRVHDVFSSTHS 273
Query: 193 LHRYFD--YSAGTEGFDFAQPSIGCNSFGR-YEIALLCLGMMHFHFGHPKQALDVLTEAV 249
L YFD G E S G +GR A L L +H FGH +QA L EA+
Sbjct: 274 LLHYFDRLILTGAES-----KSNGDEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAI 328
Query: 250 CLSQQHSNDTCLAYTLAAISNLLSEIGISTTTGILGSSYSP--------ITSIGTTLSVQ 301
++Q+ ++ CL + L+ + +SE I + +L S + + S+G VQ
Sbjct: 329 RIAQESNDHVCLQHCLSWLH--ISEQKIFDSCVLLEHSVNKSLHFGLPYLASLGIQSLVQ 386
Query: 302 QQLF 305
Q+ F
Sbjct: 387 QRAF 390
>sp|Q54VV5|APC5_DICDI Anaphase-promoting complex subunit 5 OS=Dictyostelium discoideum
GN=anapc5 PE=3 SV=1
Length = 1017
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 45/212 (21%)
Query: 159 LRQLQKLAPELHRVHFLRYLNSLYHDDYFAALENLHRYFDYSAG----------TEGFDF 208
+ +L+ P + RVH + L ++ + DY +LE+LHRYFDY G F F
Sbjct: 242 VNRLKASLPNVKRVHLISLLFNIGYQDYDQSLEDLHRYFDYVNGQMTSSQWSSSASSFLF 301
Query: 209 AQPSI----------------------GCNSFGRYEIALLCLGMMHFHFGHPKQALDVLT 246
G + A+L L +H+HFGH +++ L
Sbjct: 302 TPNDNYQSGNSNSSNYYYNNYNFIGGSGDTTNLMLPYAVLNLVRLHYHFGHYEESYLALR 361
Query: 247 EAVCLSQQHSNDTCLAYTLAAISNLLSEIGISTTTGILGSSYSPITS--IGTTLSVQQQL 304
EA+ ++Q+ ++ +CLA ++ LL + S Y+ + S + L
Sbjct: 362 EAIRIAQERADHSCLALADHWLARLLKK-----------SVYNSMESSNLLQYLLASHSD 410
Query: 305 FVLLKESFRRAESLKLKRLVAANHLAMAKFDL 336
+LK+S R+ L++ L+A NH A +K+ L
Sbjct: 411 SEILKKSIERSRDLEMPDLLALNHTAFSKYKL 442
>sp|Q9P4W7|APC5_SCHPO Anaphase-promoting complex subunit 5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=apc5 PE=1 SV=3
Length = 744
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 139 QADAIEKHGSSFSLNAFELILRQLQKLAPELHRVHFLRYLNSLYHDDYFAALENLHRYFD 198
Q + ++K G + L E + L+ L+ ++ ++LNS + DY ++ENL RYFD
Sbjct: 229 QIEHMQKFGCALPLEMKEKLHDLLEVEENNLNTSYYCKFLNSWFSGDYQQSVENLCRYFD 288
Query: 199 YSAGTEGFDFAQPSIGCNSFGRYEIALLCLGMMHFHFGHPKQALDVLTEAVCLSQQHSND 258
+ ++ Y+ ALL L M+ FG ++AL + + + +++ +
Sbjct: 289 HIMHSD------------EKVSYQYALLNLAMLQADFGCNEEALHAIEDTINTARESGDT 336
Query: 259 TCLAYTLAAI 268
CL + LA +
Sbjct: 337 ACLNFALAWM 346
>sp|Q08683|APC5_YEAST Anaphase-promoting complex subunit 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APC5 PE=1 SV=1
Length = 685
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 172 VHFLRYLNSLYHDDYFAALENLHRYFDYSAGTEGFDFAQPSIGCNSFGRYEIALLCLGMM 231
+ L+YL ++ + Y AL++LH YFDY S G NS + I+LL L
Sbjct: 301 IFILKYLEAIKENSYQTALDSLHNYFDYK-----------STG-NSQNYFHISLLSLATF 348
Query: 232 HFHFGHPKQALDVLTEAVCLSQQHSNDTCLAYTLAAISNLL 272
H F A++ EA +++++ + L + I N +
Sbjct: 349 HSSFNECDAAINSFEEATRIARENKDMETLNLIMIWIINFI 389
>sp|B8ELI3|TYSY_METSB Thymidylate synthase OS=Methylocella silvestris (strain BL2 / DSM
15510 / NCIMB 13906) GN=thyA PE=3 SV=1
Length = 269
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 566 RTLLAANQFSEAAAVAHSLFCMC-YKFNLQVENASVLLLLAEIHKKSGNAVLGIPYALAS 624
R L++A ++ A+A + C C ++FN++ ++ L +++++SG+A LG P+ +AS
Sbjct: 127 RLLVSAWNPADLPAMALAP-CHCLFQFNVRDDSTGTRRLDLQLYQRSGDAFLGAPFNIAS 185
Query: 625 LSFCQLLNLDLLKASATLTLAELWLSFGPNHAKMASNLIQQA 666
+ +L+ + LT + +FG H + N I QA
Sbjct: 186 YALLT----ELVASVCGLTPGDFVHTFGDAHLYL--NHIDQA 221
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 261,453,772
Number of Sequences: 539616
Number of extensions: 10207205
Number of successful extensions: 29674
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 29636
Number of HSP's gapped (non-prelim): 49
length of query: 775
length of database: 191,569,459
effective HSP length: 125
effective length of query: 650
effective length of database: 124,117,459
effective search space: 80676348350
effective search space used: 80676348350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)