Citrus Sinensis ID: 004083

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-----
MEGQPVVTCLSVFLLLFIQNIGGSSSASNYLIGLGSYDITGPAADVNMMGYASAEQIASGVHFRLRARTFIVAEPQGNRVVFVNLDACMASQLVTIKVLERLKARYGDLYTEQNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKCIVQAHENLQPGSIYINKGELLDAGVNRSPSSYLNNPAAERSKYKYDVDKEMTLIKFVNEEWGPIGSFNWFATHGTSMSRTNPLISGDNKGAAARFMEDWFEQRGSHNGFNSPYSNNPGTDRVPRRISNLVHNPLENGNELMKLAASFERSEGRPATRSLSVASRVRNALKRADKPQFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNQSTCNGKNELCYGRGPGYPDEFESTRIIGERQFRKAVELFNTATEQLTGKVGYKHAYVDFSNLEVGLPKRGGGTEVVKTCPAAMGFAFAAGTTDGPGAFDFKQGDDKGNPFWKLVRNVLKAPSKEQVKCQHPKPILLDTGEMKIPYDWAPSILPVQILRIGQLVILNVPGEFTTMAGRRLRDAIKMALISGGGGQFNSNVHIVIAGLTNTYSQYVTTFDEYQVQRYEGASTLYGPHTLSAYIQEFKKLAAALIIGQTVMPGPPPPDLLDKQISLLPPVVVDATPLGVKFGDVKTDVPQNSTFKRGDMVAVTFWSACPRNDLMTEGTFALVELLQGQNAWVPAYDDDDFCLKFKWSRPAKLSPQSHATVEWKIPESAVSGVYRIRHFGASKSLVGSISHFIGSSSAFVVAN
cccccHHHHHHHHHHHHHHHcccccccccEEEEEEEECcccccccccccccccccccccEEEcEEEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHccccccccEEEEcCCcccccccccccHHcccccccccHHHHHHHHHHHHHHHHHHHHccccCEEEEEEEEEcccccccccHHcccccHHHHccccccccccEEEEEEEEccccCEEEEEEEECccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEcccEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccHHHHHccccccEEEccccccccccccccCEEEEEEEEEcEEEEEccccccHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEECccccccccccccEEEEEEEcccccccccccccEEEEEEEcccccEEEEEccccccEEEEEcccccccccEEEEEEEEcccccccccEEEEEEcccccccccEEEEEECcccEEEcc
***QPVVTCLSVFLLLFIQNIGGSSSASNYLIGLGSYDITGPAADVNMMGYASAEQIASGVHFRLRARTFIVAEPQGNRVVFVNLDACMASQLVTIKVLERLKARYGDLYTEQNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKCIVQAHENLQPGSIYINKGELLDAGVNRSPSSYLNNPAAERSKYKYDVDKEMTLIKFVNEEWGPIGSFNWFATHGTSMSRTNPLISGDNKGAAARFMEDWFEQRGSHNGFNSPYSNNPGTDRVPRRISNLVHNPLENGNELMKLAASFERSEGRPATRSLSVASRVRNALKRADKPQFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNQSTCNGKNELCYGRGPGYPDEFESTRIIGERQFRKAVELFNTATEQLTGKVGYKHAYVDFSNLEVGLPKRGGGTEVVKTCPAAMGFAFAAGTTDGPGAFDFKQGDDKGNPFWKLVRNVLKAPSKEQVKCQHPKPILLDTGEMKIPYDWAPSILPVQILRIGQLVILNVPGEFTTMAGRRLRDAIKMALISGGGGQFNSNVHIVIAGLTNTYSQYVTTFDEYQVQRYEGASTLYGPHTLSAYIQEFKKLAAALIIGQTVMP*****DLLDKQISLLPPVVVDATPLGVKFGDVKTDVPQNSTFKRGDMVAVTFWSACPRNDLMTEGTFALVELLQGQNAWVPAYDDDDFCLKFKWSRPAKLSPQSHATVEWKIPESAVSGVYRIRHFGASKSLVGSISHFIGSSSAFVVA*
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MEGQPVVTCLSVFLLLFIQNIGGSSSASNYLIGLGSYDITGPAADVNMMGYASAEQIASGVHFRLRARTFIVAEPQGNRVVFVNLDACMASQLVTIKVLERLKARYGDLYTEQNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKCIVQAHENLQPGSIYINKGELLDAGVNRSPSSYLNNPAAERSKYKYDVDKEMTLIKFVNEEWGPIGSFNWFATHGTSMSRTNPLISGDNKGAAARFMEDWFEQRGSHNGFNSPYSNNPGTDRVPRRISNLVHNPLENGNELMKLAASFERSEGRPATRSLSVASRVRNALKRADKPQFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNQSTCNGKNELCYGRGPGYPDEFESTRIIGERQFRKAVELFNTATEQLTGKVGYKHAYVDFSNLEVGLPKRGGGTEVVKTCPAAMGFAFAAGTTDGPGAFDFKQGDDKGNPFWKLVRNVLKAPSKEQVKCQHPKPILLDTGEMKIPYDWAPSILPVQILRIGQLVILNVPGEFTTMAGRRLRDAIKMALISGGGGQFNSNVHIVIAGLTNTYSQYVTTFDEYQVQRYEGASTLYGPHTLSAYIQEFKKLAAALIIGQTVMPGPPPPDLLDKQISLLPPVVVDATPLGVKFGDVKTDVPQNSTFKRGDMVAVTFWSACPRNDLMTEGTFALVELLQGQNAWVPAYDDDDFCLKFKWSRPAKLSPQSHATVEWKIPESAVSGVYRIRHFGASKSLVGSISHFIGSSSAFVVAN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Neutral ceramidase Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. Uses ceramide instead of phytoceramide as substrate.confidentQ0JL46
Neutral ceramidase Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.confidentQ304B9
Neutral ceramidase B Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.probableQ55G11

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.5.-.-Acting on carbon-nitrogen bonds, other than peptide bonds.probable
3.5.1.-11-cis-retinol dehydrogenase.probable
3.5.1.23Ceramidase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZWS, chain A
Confidence level:very confident
Coverage over the Query: 27-259,331-351,375-457,475-774
View the alignment between query and template
View the model in PyMOL