Query 004085
Match_columns 774
No_of_seqs 368 out of 1676
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 13:46:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f9u_A CG32412; alpha/beta hyd 100.0 1.6E-31 5.4E-36 288.1 19.6 204 8-219 64-305 (312)
2 3kas_A Transferrin receptor pr 100.0 1.4E-31 4.8E-36 312.7 19.2 211 6-221 262-491 (640)
3 4fuu_A Leucine aminopeptidase; 100.0 2E-31 6.8E-36 287.2 16.9 192 8-210 80-307 (309)
4 4fai_A CG5976, isoform B; alph 100.0 1.4E-30 4.6E-35 283.4 17.4 199 8-212 91-323 (330)
5 3fed_A Glutamate carboxypeptid 100.0 2E-30 6.9E-35 305.6 16.1 211 5-220 307-553 (707)
6 3tc8_A Leucine aminopeptidase; 100.0 1.8E-28 6E-33 264.4 18.6 188 9-210 81-308 (309)
7 3pb6_X Glutaminyl-peptide cycl 100.0 6.1E-28 2.1E-32 262.1 20.1 194 9-212 95-328 (330)
8 3gux_A Putative Zn-dependent e 100.0 5.6E-28 1.9E-32 261.0 18.2 188 9-210 83-312 (314)
9 3iib_A Peptidase M28; YP_92679 100.0 2.8E-28 9.5E-33 275.2 15.9 201 7-217 232-436 (444)
10 1tkj_A Aminopeptidase, SGAP; d 99.9 6.6E-27 2.3E-31 248.9 21.1 195 10-218 64-282 (284)
11 2afw_A Glutaminyl-peptide cycl 99.9 1.9E-26 6.6E-31 250.5 21.9 198 9-212 87-327 (329)
12 2ek8_A Aminopeptidase; metallo 99.9 1.6E-26 5.6E-31 259.0 20.7 199 9-220 202-408 (421)
13 1rtq_A Bacterial leucyl aminop 99.9 5.6E-25 1.9E-29 235.6 16.9 201 9-218 74-293 (299)
14 3k9t_A Putative peptidase; str 99.9 5.2E-21 1.8E-25 209.8 19.0 186 9-215 164-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.5 2.3E-13 7.9E-18 143.2 17.8 191 2-213 40-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.5 1.7E-13 5.9E-18 144.0 14.6 188 9-213 50-268 (268)
17 1vhe_A Aminopeptidase/glucanas 99.3 7.4E-12 2.5E-16 137.8 14.9 149 45-213 182-354 (373)
18 1y0y_A FRV operon protein FRVX 99.3 6.8E-12 2.3E-16 136.9 14.0 150 45-213 180-350 (353)
19 2wyr_A Cobalt-activated peptid 99.3 1E-11 3.6E-16 134.2 13.5 148 45-211 171-332 (332)
20 2gre_A Deblocking aminopeptida 99.3 1.6E-11 5.6E-16 133.8 14.1 145 45-209 184-343 (349)
21 2fvg_A Endoglucanase; TM1049, 99.2 2.2E-11 7.5E-16 132.2 9.9 148 45-213 165-335 (340)
22 1q7l_A Aminoacylase-1; catalys 99.1 3E-10 1E-14 114.1 11.5 95 9-106 57-174 (198)
23 2zog_A Cytosolic non-specific 99.0 3.1E-09 1E-13 120.1 14.2 96 11-110 83-201 (479)
24 3ct9_A Acetylornithine deacety 98.9 5.6E-09 1.9E-13 113.8 12.5 100 2-110 45-164 (356)
25 1cg2_A Carboxypeptidase G2; me 98.8 7E-09 2.4E-13 114.3 11.1 94 11-111 71-181 (393)
26 3dlj_A Beta-Ala-His dipeptidas 98.8 1.9E-08 6.4E-13 114.2 13.4 96 11-110 90-208 (485)
27 3pfo_A Putative acetylornithin 98.8 1.4E-08 4.9E-13 113.0 12.0 97 8-111 88-205 (433)
28 2pok_A Peptidase, M20/M25/M40 98.8 1.1E-08 3.7E-13 116.0 10.7 98 10-110 92-211 (481)
29 3n5f_A L-carbamoylase, N-carba 98.8 1.4E-08 4.7E-13 112.6 10.8 89 2-94 49-142 (408)
30 1ylo_A Hypothetical protein SF 98.8 5.5E-08 1.9E-12 105.3 14.1 150 45-213 167-338 (348)
31 1vho_A Endoglucanase; structur 98.7 6.8E-08 2.3E-12 104.7 14.5 152 45-214 170-337 (346)
32 3tx8_A Succinyl-diaminopimelat 98.7 5.2E-08 1.8E-12 106.2 11.2 95 10-110 57-167 (369)
33 3ife_A Peptidase T; metallopep 98.6 3.4E-08 1.2E-12 110.5 8.2 102 2-109 71-224 (434)
34 2rb7_A Peptidase, M20/M25/M40 98.6 3.7E-08 1.3E-12 107.6 8.1 93 11-109 51-164 (364)
35 3gb0_A Peptidase T; NP_980509. 98.6 6.6E-08 2.2E-12 105.5 9.8 95 10-111 56-168 (373)
36 2v8h_A Beta-alanine synthase; 98.6 9.3E-08 3.2E-12 108.3 10.8 88 1-93 83-175 (474)
37 1z2l_A Allantoate amidohydrola 98.6 6.3E-08 2.2E-12 107.6 8.8 89 1-93 52-145 (423)
38 1vgy_A Succinyl-diaminopimelat 98.6 1.8E-07 6.3E-12 102.9 12.2 103 2-110 40-168 (393)
39 3khx_A Putative dipeptidase sa 98.5 2.1E-07 7.3E-12 105.9 10.8 84 10-97 86-188 (492)
40 3pfe_A Succinyl-diaminopimelat 98.5 1.3E-07 4.5E-12 107.0 8.9 95 10-110 77-193 (472)
41 1lfw_A PEPV; hydrolase, dipept 98.5 4.4E-07 1.5E-11 102.2 12.9 89 2-96 60-168 (470)
42 3isz_A Succinyl-diaminopimelat 98.5 5.1E-07 1.8E-11 98.0 11.7 96 8-109 46-164 (377)
43 3rza_A Tripeptidase; phosphory 98.5 2.9E-07 9.9E-12 101.5 9.2 96 10-110 74-188 (396)
44 3cpx_A Aminopeptidase, M42 fam 98.5 1.5E-07 5.1E-12 101.5 6.6 147 45-211 163-321 (321)
45 1fno_A Peptidase T; metallo pe 98.4 1.7E-07 5.8E-12 104.0 7.0 102 2-110 46-198 (417)
46 3kl9_A PEPA, glutamyl aminopep 98.4 1.2E-06 4.2E-11 95.8 12.8 149 44-212 179-345 (355)
47 2f7v_A Aectylcitrulline deacet 98.4 8.4E-07 2.9E-11 96.9 11.0 83 10-110 58-160 (369)
48 1xmb_A IAA-amino acid hydrolas 98.4 1.1E-06 3.9E-11 97.6 12.1 99 2-108 62-176 (418)
49 3mru_A Aminoacyl-histidine dip 98.4 6.3E-07 2.2E-11 102.0 10.0 102 1-110 47-175 (490)
50 1ysj_A Protein YXEP; M20 famil 98.3 2.4E-06 8.3E-11 94.5 12.3 91 11-107 77-181 (404)
51 2qyv_A XAA-His dipeptidase; YP 98.3 1.7E-06 5.6E-11 98.2 9.3 102 1-110 44-172 (487)
52 2vpu_A TET3, 354AA long hypoth 98.2 1.5E-05 5E-10 87.3 14.0 150 44-213 182-349 (354)
53 3ram_A HMRA protein; two-domai 98.1 4.7E-06 1.6E-10 92.0 8.7 95 10-110 61-158 (394)
54 3io1_A Aminobenzoyl-glutamate 98.1 1.7E-05 5.9E-10 88.9 12.2 94 9-108 95-209 (445)
55 3isx_A Endoglucanase; TM1050, 97.7 0.00029 1E-08 76.6 13.4 143 44-208 177-341 (343)
56 2wzn_A TET3, 354AA long hypoth 96.8 0.015 5E-07 60.2 14.1 56 154-214 294-350 (354)
57 2glf_A Probable M18-family ami 92.9 0.18 6.3E-06 56.6 8.0 152 43-210 245-449 (450)
58 2ijz_A Probable M18-family ami 92.3 0.25 8.5E-06 55.1 8.0 153 42-209 230-423 (428)
59 3vat_A Dnpep, aspartyl aminope 84.4 1.6 5.3E-05 49.6 7.3 160 43-213 281-488 (496)
60 2glj_A Probable M18-family ami 72.8 1.1 3.8E-05 50.3 1.5 44 43-90 257-300 (461)
61 1q7l_B Aminoacylase-1; catalys 72.7 6.5 0.00022 33.2 6.1 59 153-215 23-82 (88)
62 1y7e_A Probable M18-family ami 68.8 0.79 2.7E-05 51.6 -0.9 46 43-91 251-296 (458)
63 2lx0_A Membrane fusion protein 39.3 28 0.00095 23.5 3.1 18 479-496 7-24 (32)
64 2l8s_A Integrin alpha-1; trans 31.7 73 0.0025 25.0 4.9 34 471-506 6-39 (54)
65 3pfo_A Putative acetylornithin 27.4 36 0.0012 36.9 3.6 56 154-214 375-430 (433)
66 3rza_A Tripeptidase; phosphory 24.8 77 0.0026 33.8 5.6 55 154-214 340-394 (396)
67 3isz_A Succinyl-diaminopimelat 22.9 85 0.0029 32.9 5.4 53 155-213 324-376 (377)
68 3gb0_A Peptidase T; NP_980509. 21.7 96 0.0033 32.7 5.5 52 154-211 320-371 (373)
69 1cg2_A Carboxypeptidase G2; me 20.8 50 0.0017 35.3 3.1 55 154-213 336-391 (393)
No 1
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.97 E-value=1.6e-31 Score=288.10 Aligned_cols=204 Identities=18% Similarity=0.255 Sum_probs=154.7
Q ss_pred eccceEEEEEcCCCCCCCCCCeEEEeecccCcC-----CCCCCCCChhHHHHHHHHHHHHHHc-----CCCCCccEEEEE
Q 004085 8 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVF-----AAEGAGDCSSCVAVMLELARAMSQW-----AHGFKNAVIFLF 77 (774)
Q Consensus 8 ~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~-----~spGA~DngsGvAvmLElaR~L~~~-----~~~p~~~IiFlf 77 (774)
.+.+||||+++|+ ++++|+|+|||||++ .++||+|||||||+|||+||+|++. +.+|+|+|+|+|
T Consensus 64 ~~~~Nii~~~~~~-----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~ 138 (312)
T 4f9u_A 64 LTFANVVGTINPQ-----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIF 138 (312)
T ss_dssp EEEEEEEEEESTT-----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEE
T ss_pred eeEEEEEEEECCC-----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEE
Confidence 4568999999986 467999999999985 3589999999999999999999762 468999999999
Q ss_pred eCCcCCC--------CcchHHHHhhCCC-------------ccCceEEEEeccCCCCCCcceee-cCCC---hHHH---H
Q 004085 78 NTGEEEG--------LNGAHSFVTQHPW-------------STTIRVAIDLEAMGIGGKSGLFQ-AGPH---PWAV---E 129 (774)
Q Consensus 78 ~~aEE~g--------l~GS~~fv~~h~~-------------~~~i~a~INLD~~G~gg~~~lfq-~g~~---~~li---~ 129 (774)
|+|||.| |+||++|+++|++ .+++.++||+|++|..++..... .+.. +.+. +
T Consensus 139 fdaEE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~ 218 (312)
T 4f9u_A 139 FDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEK 218 (312)
T ss_dssp ESCCSCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHH
T ss_pred ecCccccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHH
Confidence 9999988 9999999987642 24789999999999877664221 1111 1111 1
Q ss_pred HHHHHhcCCCCcccchhccccCCCCCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 004085 130 NFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLL 209 (774)
Q Consensus 130 ~~~~~a~~P~~~~~~~d~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~ 209 (774)
...+....+............+ ...+||.+|.+ .|||++++......++|||+.||+|+||+++|+++++++.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~--~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~ 295 (312)
T 4f9u_A 219 SLRTAGQLEGNNNMFLSRVSGG--LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVY 295 (312)
T ss_dssp HHHHTTCSSSSCCCEEEEECSS--CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhccccccccccccccCCC--CCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHH
Confidence 2222111111111111111111 23689999998 89999999887777889999999999999999999999999999
Q ss_pred HHhcCCCCCC
Q 004085 210 QAASSTSLPK 219 (774)
Q Consensus 210 ~la~~~~l~~ 219 (774)
++.+.+..|.
T Consensus 296 e~l~~~~~P~ 305 (312)
T 4f9u_A 296 QYLKRHTSPV 305 (312)
T ss_dssp HHHHHCCSCC
T ss_pred HHHhCCCCCC
Confidence 9888776664
No 2
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.97 E-value=1.4e-31 Score=312.67 Aligned_cols=211 Identities=17% Similarity=0.148 Sum_probs=178.7
Q ss_pred EEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHHc----CCCCCccEEEEEeCCc
Q 004085 6 IYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQW----AHGFKNAVIFLFNTGE 81 (774)
Q Consensus 6 ~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~~----~~~p~~~IiFlf~~aE 81 (774)
...++.|||++|+|+ +.++++|+++||+|||. +||+||++|+|+|||++|.|++. +++|+|+|+|++|+||
T Consensus 262 ~~~~~~NVi~~i~G~---~~~~~~vvvgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~E 336 (640)
T 3kas_A 262 KEIKILNIFGVIKGF---VEPDHYVVVGAQRDAWG--PGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAG 336 (640)
T ss_dssp EEEEEEEEEEEECCS---SEEEEEEEEEEECCCSS--CCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSG
T ss_pred EeeeEEEEEEEEeCC---cCCCCceeeecccCCCC--CCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCc
Confidence 456889999999996 24678999999999994 99999999999999999999864 6899999999999999
Q ss_pred CCCCcchHHHHhhCC-C-ccCceEEEEeccCCCCCCcceeecCC-ChHHHHHHHHHhcCCCCc-ccchh-ccc--cCCCC
Q 004085 82 EEGLNGAHSFVTQHP-W-STTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAAAAKYPSGQ-VTAQD-LFA--SGAIT 154 (774)
Q Consensus 82 E~gl~GS~~fv~~h~-~-~~~i~a~INLD~~G~gg~~~lfq~g~-~~~li~~~~~~a~~P~~~-~~~~d-~f~--~g~ip 154 (774)
|.|+.||++|+++|. + .++++++||+|++|.|++...++++| ..++++.+.+.+++|.+. ++.++ .+. .+.++
T Consensus 337 E~gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~ 416 (640)
T 3kas_A 337 DFGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLT 416 (640)
T ss_dssp GGTSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCC
T ss_pred ccCchhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCC
Confidence 999999999999883 3 48999999999999887777777666 367777777778889763 34332 232 35688
Q ss_pred CCCchHHHhhcCCCeEEEEeeeCC--CCCCCCcCCCcCCCCH------HHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 004085 155 SATDFQVYKEVAGLSGLDFAYTDK--SAVYHTKNDKLDLLKP------GSLQHLGENMLAFLLQAASSTSLPKGN 221 (774)
Q Consensus 155 s~TD~~~F~~~~GIPgld~a~~~~--~~~YHT~~Dt~d~id~------~slq~~g~~vl~~v~~la~~~~l~~~~ 221 (774)
++|||.+|.++.|||+++++|..+ ..+|||.+||+++++. ..++.+++.+..++.+|++++.+|.+.
T Consensus 417 ~~sD~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~ 491 (640)
T 3kas_A 417 LDNAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDY 491 (640)
T ss_dssp TTSTHHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCT
T ss_pred CCcchHHHHHhCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 999999999889999999999865 3469999999997764 468889999999999999999998653
No 3
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=2e-31 Score=287.21 Aligned_cols=192 Identities=23% Similarity=0.270 Sum_probs=148.5
Q ss_pred eccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC-------------CCCCCChhHHHHHHHHHHHHHHcCCCCCccEE
Q 004085 8 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVI 74 (774)
Q Consensus 8 ~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s-------------pGA~DngsGvAvmLElaR~L~~~~~~p~~~Ii 74 (774)
.+.+|||++++|+ .++.|+|+|||||++.+ +||+||+||||+|||+||+|++. +++++|+
T Consensus 80 ~~~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~ 152 (309)
T 4fuu_A 80 LKARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGID 152 (309)
T ss_dssp EEEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEE
T ss_pred ceeEEEEEEECCC-----CCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceE
Confidence 4678999999986 45789999999998653 69999999999999999999984 7899999
Q ss_pred EEEeCCcCCCC--------------cchHHHHhhCC-CccCceEEEEeccCCCCCCcceeecCCC---hHHHHHHHHHhc
Q 004085 75 FLFNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAIDLEAMGIGGKSGLFQAGPH---PWAVENFAAAAK 136 (774)
Q Consensus 75 Flf~~aEE~gl--------------~GS~~fv~~h~-~~~~i~a~INLD~~G~gg~~~lfq~g~~---~~li~~~~~~a~ 136 (774)
|+||+|||.|+ +||++|+++++ +.++++++||+|++|..++......... +.+.+...+.+.
T Consensus 153 ~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T 4fuu_A 153 IIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAK 232 (309)
T ss_dssp EEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHH
T ss_pred EEeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHH
Confidence 99999999995 89999997754 4589999999999998877655442221 334444433322
Q ss_pred CC-CCcccchhccccCCCCCCCchHHHhhcCCCeEEEEeeeC----CCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 004085 137 YP-SGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTD----KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 210 (774)
Q Consensus 137 ~P-~~~~~~~d~f~~g~ips~TD~~~F~~~~GIPgld~a~~~----~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~ 210 (774)
.. .... ...+.+. ...+||.+|.+.+|||++++.... .+++|||++||+|+||+++||++|+++++++++
T Consensus 233 ~~~~~~~---~~~~~~~-~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 233 KAGYGKT---FIDERGD-TITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp HTTCTTT---EEEEECC-CCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred hcCCccc---ccccCCC-CCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence 11 1111 1112222 235799999876899999997643 245899999999999999999999999999874
No 4
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.97 E-value=1.4e-30 Score=283.37 Aligned_cols=199 Identities=20% Similarity=0.226 Sum_probs=147.2
Q ss_pred eccceEEEEEcCCCCCCCCCCeEEEeecccCcCC----CCCCCCChhHHHHHHHHHHHHHH---cCCCCCccEEEEEeCC
Q 004085 8 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA----AEGAGDCSSCVAVMLELARAMSQ---WAHGFKNAVIFLFNTG 80 (774)
Q Consensus 8 ~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~----spGA~DngsGvAvmLElaR~L~~---~~~~p~~~IiFlf~~a 80 (774)
.+.+|||++++|+ .+++|+|+|||||++. .+||+|||||||+|||+||+|++ .+.+|+|+|+|+||+|
T Consensus 91 ~~~~Nii~~~~~~-----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdg 165 (330)
T 4fai_A 91 LHFHNIIATLNPN-----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDG 165 (330)
T ss_dssp EEEEEEEEESCTT-----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESC
T ss_pred eeEEEEEEEECCC-----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecc
Confidence 4568999999885 4678999999999864 48999999999999999999976 3568999999999999
Q ss_pred cCCCC--------cchHHHHhhC---CCccCceEEEEeccCCCCCCcceeecCCChHHHHHHH----HHh------cCC-
Q 004085 81 EEEGL--------NGAHSFVTQH---PWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFA----AAA------KYP- 138 (774)
Q Consensus 81 EE~gl--------~GS~~fv~~h---~~~~~i~a~INLD~~G~gg~~~lfq~g~~~~li~~~~----~~a------~~P- 138 (774)
||.|+ +||++|+++. .+.+++.++||+|++|.+++.......+..+...... +.. ..+
T Consensus 166 EE~Gl~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (330)
T 4fai_A 166 EEAFEEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYAS 245 (330)
T ss_dssp CSCSSSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC------
T ss_pred ccccccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhc
Confidence 99985 7999999763 3457999999999999887765433222222211111 100 000
Q ss_pred --CCcccchhccccC---CCCCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 004085 139 --SGQVTAQDLFASG---AITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAA 212 (774)
Q Consensus 139 --~~~~~~~d~f~~g---~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la 212 (774)
.........|+.. -....+||.+|.+ .|||++++...+.+++|||+.||+|+||+++++++++.+.+++.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL 323 (330)
T 4fai_A 246 SGVAQRDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALEYL 323 (330)
T ss_dssp ---------CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 0000000111110 0113589999999 89999999877777899999999999999999999999999887643
No 5
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.97 E-value=2e-30 Score=305.61 Aligned_cols=211 Identities=20% Similarity=0.240 Sum_probs=177.5
Q ss_pred EEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHH---cCCCCCccEEEEEeCCc
Q 004085 5 LIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQ---WAHGFKNAVIFLFNTGE 81 (774)
Q Consensus 5 ~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~---~~~~p~~~IiFlf~~aE 81 (774)
....++.|||++++|+ +.++++|+++||+|||. +||+||++|||+|||++|.|++ .+++|+|+|+|++|+||
T Consensus 307 ~~~~~~~NVi~~i~G~---~~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~E 381 (707)
T 3fed_A 307 NKITRIYNVVGTIRGS---VEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAE 381 (707)
T ss_dssp EEEEEEEEEEEEECCS---SEEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCG
T ss_pred EEEEEEEEEEEEEeCC---CCCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCc
Confidence 3566889999999997 24678999999999997 7999999999999999999987 46899999999999999
Q ss_pred CCCCcchHHHHhhCC--CccCceEEEEeccCCCCCCcceeecCC-ChHHHHHHHHHhcCCCC----cccchhccc-----
Q 004085 82 EEGLNGAHSFVTQHP--WSTTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAAAAKYPSG----QVTAQDLFA----- 149 (774)
Q Consensus 82 E~gl~GS~~fv~~h~--~~~~i~a~INLD~~G~gg~~~lfq~g~-~~~li~~~~~~a~~P~~----~~~~~d~f~----- 149 (774)
|.|+.||++|+++|+ +.+++.++||+|++|.|+....++++| ..++++.+.+.+++|.+ .++.+..++
T Consensus 382 E~Gl~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~ 461 (707)
T 3fed_A 382 EFGLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSP 461 (707)
T ss_dssp GGTSHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEET
T ss_pred cccchhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccc
Confidence 999999999999886 468999999999999988777888766 46788888888889976 344443332
Q ss_pred -------cCCCCCCCchHHHhhcCCCeEEEEeeeCC-------C-CCCCCcCCCcCCCCH------HHHHHHHHHHHHHH
Q 004085 150 -------SGAITSATDFQVYKEVAGLSGLDFAYTDK-------S-AVYHTKNDKLDLLKP------GSLQHLGENMLAFL 208 (774)
Q Consensus 150 -------~g~ips~TD~~~F~~~~GIPgld~a~~~~-------~-~~YHT~~Dt~d~id~------~slq~~g~~vl~~v 208 (774)
.+.+.++|||.+|.++.|||++++++..+ . ++|||.+||+++++. ..++.+++.+..++
T Consensus 462 ~~~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~ 541 (707)
T 3fed_A 462 ENKNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALV 541 (707)
T ss_dssp TEEEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHH
T ss_pred cccCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 12345889999999989999999999844 2 479999999987643 46777899999999
Q ss_pred HHHhcCCCCCCC
Q 004085 209 LQAASSTSLPKG 220 (774)
Q Consensus 209 ~~la~~~~l~~~ 220 (774)
.+||+++.+|.+
T Consensus 542 l~La~~~vlP~~ 553 (707)
T 3fed_A 542 YELVDSKIIPFN 553 (707)
T ss_dssp HHHHHCSSCCCC
T ss_pred HHHhCCccCCCC
Confidence 999999998854
No 6
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.96 E-value=1.8e-28 Score=264.44 Aligned_cols=188 Identities=22% Similarity=0.287 Sum_probs=148.3
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC-------------CCCCCChhHHHHHHHHHHHHHHcCCCCCccEEE
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF 75 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s-------------pGA~DngsGvAvmLElaR~L~~~~~~p~~~IiF 75 (774)
+..|||++++|+ +++.|+++|||||++.+ +||+||++|||+|||++|.|++. +++++|+|
T Consensus 81 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 81 EARNIIGSFDPE-----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 468999999985 35799999999999866 79999999999999999999986 48999999
Q ss_pred EEeCCcCCCC-------------cchHHHHhhCCC-ccCceEEEEeccCCCCCCcceeecCC-C---hHHHHHHHHHhcC
Q 004085 76 LFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGP-H---PWAVENFAAAAKY 137 (774)
Q Consensus 76 lf~~aEE~gl-------------~GS~~fv~~h~~-~~~i~a~INLD~~G~gg~~~lfq~g~-~---~~li~~~~~~a~~ 137 (774)
+++++||.|+ +||++|+++++. .++++++||+|++|..++..... +. . +.+++.+.+.++.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~~ 232 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAARD 232 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec-ccccchHHHHHHHHHHHHHH
Confidence 9999999999 999999965443 37899999999999887653222 11 1 2345544443211
Q ss_pred CCCcccchhcccc---CCCCCCCchHHHhhcCCCeEEEEeee------CCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHH
Q 004085 138 PSGQVTAQDLFAS---GAITSATDFQVYKEVAGLSGLDFAYT------DKSAVYHTKNDKLDLLKPGSLQHLGENMLAFL 208 (774)
Q Consensus 138 P~~~~~~~d~f~~---g~ips~TD~~~F~~~~GIPgld~a~~------~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v 208 (774)
.+. ...|+. |.+ .+||.+|.++.|||++++... ...++|||+.||+|+||+++|+++++++++++
T Consensus 233 -~g~---~~~f~~~~~g~~--~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~v 306 (309)
T 3tc8_A 233 -LGY---GKYFINAAGGAI--TDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVI 306 (309)
T ss_dssp -HTC---TTTEEEEECCCC--CCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred -cCC---cceeccCCCCCC--CCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHH
Confidence 111 111221 222 589999998679999999765 34579999999999999999999999999998
Q ss_pred HH
Q 004085 209 LQ 210 (774)
Q Consensus 209 ~~ 210 (774)
++
T Consensus 307 y~ 308 (309)
T 3tc8_A 307 YN 308 (309)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 7
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.95 E-value=6.1e-28 Score=262.13 Aligned_cols=194 Identities=21% Similarity=0.255 Sum_probs=147.7
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcCC------CCCCCCChhHHHHHHHHHHHHHHc-----CCCCCccEEEEE
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFA------AEGAGDCSSCVAVMLELARAMSQW-----AHGFKNAVIFLF 77 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~------spGA~DngsGvAvmLElaR~L~~~-----~~~p~~~IiFlf 77 (774)
+..|||++++|+ .++.|+++|||||++. .+||+||++|||+|||+||.|++. +.+++++|+|++
T Consensus 95 ~~~Nvia~~~g~-----~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~ 169 (330)
T 3pb6_X 95 DFGNVVATLDPR-----AARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLF 169 (330)
T ss_dssp EEEEEEEESCTT-----SSEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEE
Confidence 458999999986 3578999999999763 389999999999999999999873 357999999999
Q ss_pred eCCcCC--------CCcchHHHHhhC-----C----CccCceEEEEeccCCCCCCcceeecCCChHHHHHHH---HHh--
Q 004085 78 NTGEEE--------GLNGAHSFVTQH-----P----WSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFA---AAA-- 135 (774)
Q Consensus 78 ~~aEE~--------gl~GS~~fv~~h-----~----~~~~i~a~INLD~~G~gg~~~lfq~g~~~~li~~~~---~~a-- 135 (774)
++|||. |++||++|+++. + ..++|+++||+|++|..++.....-....++.+... +..
T Consensus 170 ~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~l~~i~~~~~~ 249 (330)
T 3pb6_X 170 LDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHR 249 (330)
T ss_dssp ESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCGGGHHHHHHHHHHHHHHHH
T ss_pred EcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeecCcchHHHHHHHHHHHHHHH
Confidence 999999 999999998752 2 357999999999999987764211111222222221 111
Q ss_pred -----cCCCCcccchhcccc--CCCCCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHH
Q 004085 136 -----KYPSGQVTAQDLFAS--GAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFL 208 (774)
Q Consensus 136 -----~~P~~~~~~~d~f~~--g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v 208 (774)
.+|... ..|.. ..-...+||.+|.+ .|||++++......++|||+.||+|+||+++++++++.+..++
T Consensus 250 ~g~~~~~p~~~----~~f~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv 324 (330)
T 3pb6_X 250 LNLLQSHPQEV----MYFQPGEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFL 324 (330)
T ss_dssp TTCCSSCCSSC----SSBCSSCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHH
T ss_pred cCccccCCccc----ccccccccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHH
Confidence 122111 11210 01124699999999 9999999976666679999999999999999999999999998
Q ss_pred HHHh
Q 004085 209 LQAA 212 (774)
Q Consensus 209 ~~la 212 (774)
.+.-
T Consensus 325 ~Eyl 328 (330)
T 3pb6_X 325 AEYL 328 (330)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8753
No 8
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.95 E-value=5.6e-28 Score=260.95 Aligned_cols=188 Identities=21% Similarity=0.322 Sum_probs=130.4
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC-------------CCCCCChhHHHHHHHHHHHHHHcCCCCCccEEE
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF 75 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s-------------pGA~DngsGvAvmLElaR~L~~~~~~p~~~IiF 75 (774)
+..|||++++|+ +++.|+++|||||++.+ +||+||++|||+|||++|.|++. +++++|+|
T Consensus 83 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~f 155 (314)
T 3gux_A 83 KSRNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDI 155 (314)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEE
Confidence 468999999985 35799999999999865 79999999999999999999986 48999999
Q ss_pred EEeCCcCCCC--------------cchHHHHhhCCC-ccCceEEEEeccCCCCCCcceeecCCC----hHHHHHHHHHhc
Q 004085 76 LFNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGPH----PWAVENFAAAAK 136 (774)
Q Consensus 76 lf~~aEE~gl--------------~GS~~fv~~h~~-~~~i~a~INLD~~G~gg~~~lfq~g~~----~~li~~~~~~a~ 136 (774)
+++++||.|+ +||++|+++++. .++++++||+|++|..++. +++.+.. +++.+.+.+.++
T Consensus 156 v~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~-~~~~g~~~~~~~~l~~~~~~~~~ 234 (314)
T 3gux_A 156 VFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDAT-FYYEGYSARTARSEMKKIWKKAH 234 (314)
T ss_dssp EEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCC-EEECTTHHHHCHHHHHHHHHHHH
T ss_pred EEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCc-eeeeccccccHHHHHHHHHHHHH
Confidence 9999999999 999999965443 3789999999999998765 4444442 345555544321
Q ss_pred CCCCcccchhccc---cCCCCCCCchHHHhhcCCCeEEEEeeeCC-------CCCCCCcCCCcCCCCHHHHHHHHHHHHH
Q 004085 137 YPSGQVTAQDLFA---SGAITSATDFQVYKEVAGLSGLDFAYTDK-------SAVYHTKNDKLDLLKPGSLQHLGENMLA 206 (774)
Q Consensus 137 ~P~~~~~~~d~f~---~g~ips~TD~~~F~~~~GIPgld~a~~~~-------~~~YHT~~Dt~d~id~~slq~~g~~vl~ 206 (774)
. .+. ...|+ .+. ..+||.+|.+..|||++++..... .++|||+.||+|+||+++|++.++++++
T Consensus 235 ~-~g~---~~~f~~~~~~~--~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~ 308 (314)
T 3gux_A 235 E-LGY---GKYFVKEDGGE--TVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMD 308 (314)
T ss_dssp H-HTC---TTTEEEEECCC--CCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHH
T ss_pred H-cCC---ccccccccCCC--CCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHH
Confidence 1 111 01121 122 359999999856999999976531 3789999999999999999999999999
Q ss_pred HHHH
Q 004085 207 FLLQ 210 (774)
Q Consensus 207 ~v~~ 210 (774)
++++
T Consensus 309 ~~y~ 312 (314)
T 3gux_A 309 VIYN 312 (314)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9875
No 9
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.95 E-value=2.8e-28 Score=275.19 Aligned_cols=201 Identities=17% Similarity=0.180 Sum_probs=161.2
Q ss_pred EeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCc
Q 004085 7 YSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLN 86 (774)
Q Consensus 7 y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~ 86 (774)
..+..|||++++|+. .+++.|+++||+||++.++||+||++|+|++||++|.|++.+++|+|+|+|++|++||.|+.
T Consensus 232 ~~~~~Nvi~~~~g~~---~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~ 308 (444)
T 3iib_A 232 ETTSYNVIAEVKGST---KADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLL 308 (444)
T ss_dssp EEEEEEEEEEECCST---EEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSH
T ss_pred CceeEEEEEEEeCCC---CCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCc
Confidence 467899999999972 35789999999999999999999999999999999999998888999999999999999999
Q ss_pred chHHHHhhCCC-ccCceEEEEeccCCCCCCcceeecCC-ChHHHHHHHHHhcCCCCcccchhccccCCCCCCCchHHHhh
Q 004085 87 GAHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKE 164 (774)
Q Consensus 87 GS~~fv~~h~~-~~~i~a~INLD~~G~gg~~~lfq~g~-~~~li~~~~~~a~~P~~~~~~~d~f~~g~ips~TD~~~F~~ 164 (774)
||++|+++|+. .+++.+++|+|+.|.....+.++.++ ...+++.+.+.. .+.+... + ......+|||.+|.+
T Consensus 309 Gs~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~--~---~~~~~~~SD~~~f~~ 382 (444)
T 3iib_A 309 GGKTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA--G---NNKASGGPDVSMLPA 382 (444)
T ss_dssp HHHHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE--C---CSCCCCCGGGTTSGG
T ss_pred CHHHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc--c---cCCCCCCCccHHHHH
Confidence 99999998854 36899999999876432222233222 245666665432 2333211 0 112356899999998
Q ss_pred cCCCeEEEEeeeCC--CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 004085 165 VAGLSGLDFAYTDK--SAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSL 217 (774)
Q Consensus 165 ~~GIPgld~a~~~~--~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~~~~l 217 (774)
.|||++++..... .++|||++||+|++|++.|++.++.+..+++.+|++++.
T Consensus 383 -~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 383 -LGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp -GTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred -CCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 8999999876432 358999999999999999999999999999999998763
No 10
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.95 E-value=6.6e-27 Score=248.89 Aligned_cols=195 Identities=18% Similarity=0.232 Sum_probs=155.0
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchH
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAH 89 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~ 89 (774)
..|||++++|+ .+++.|+++||+|+++.++||.||++|+|++||++|.|++.+.+++++|+|+|+++||.|+.||+
T Consensus 64 ~~nvi~~~~g~----~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~ 139 (284)
T 1tkj_A 64 GYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSK 139 (284)
T ss_dssp EEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHH
T ss_pred ceeEEEEEeCC----CCCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHH
Confidence 47999999885 24578999999999999999999999999999999999988778999999999999999999999
Q ss_pred HHHhhCCC--ccCceEEEEeccCCCCCCcceeecCCChHHHHHHHHHh---cCCCCcccchhccccCCCCCCCchHHHhh
Q 004085 90 SFVTQHPW--STTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAA---KYPSGQVTAQDLFASGAITSATDFQVYKE 164 (774)
Q Consensus 90 ~fv~~h~~--~~~i~a~INLD~~G~gg~~~lfq~g~~~~li~~~~~~a---~~P~~~~~~~d~f~~g~ips~TD~~~F~~ 164 (774)
.|+++++. .+++.++||+|+.|.++....+. +.++.+.+.+.+.+ ..|.. ... .-..+|||.+|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~gi~~~------~~~--~~~~~sD~~~f~~ 210 (284)
T 1tkj_A 140 FYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAGLNVPTE------IET--EGDGRSDHAPFKN 210 (284)
T ss_dssp HHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHHHTCCCE------ECC--SSTTCSTHHHHHH
T ss_pred HHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cCCHHHHHHHHHHHHHcCCCcc------cCC--CCCCCCchHHHHH
Confidence 99988874 37899999999999876544433 33555544443322 22221 111 1134799999998
Q ss_pred cCCCeEEEEeeeC-------------------CCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 004085 165 VAGLSGLDFAYTD-------------------KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLP 218 (774)
Q Consensus 165 ~~GIPgld~a~~~-------------------~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~~~~l~ 218 (774)
.|||++.+.... ..++|||+.||++++|++.++++++.+..+++.|++++.+|
T Consensus 211 -~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 211 -VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp -TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred -CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 899999986541 14689999999999999999999999999999999988776
No 11
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.94 E-value=1.9e-26 Score=250.47 Aligned_cols=198 Identities=19% Similarity=0.260 Sum_probs=145.9
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC-------CCCCCChhHHHHHHHHHHHHHHc--------CCCCCccE
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------EGAGDCSSCVAVMLELARAMSQW--------AHGFKNAV 73 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s-------pGA~DngsGvAvmLElaR~L~~~--------~~~p~~~I 73 (774)
+..|||++++|+ +++.|+++|||||++.+ +||+||++|||+|||++|.|++. +.+++++|
T Consensus 87 ~~~Nvi~~~~g~-----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i 161 (329)
T 2afw_A 87 SFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSL 161 (329)
T ss_dssp EEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEE
T ss_pred eEeEEEEEECCC-----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccE
Confidence 479999999885 46899999999998765 89999999999999999999875 35789999
Q ss_pred EEEEeCCcCC--------CCcchHHHHhhCC------------CccCceEEEEeccCCCCCCcceeecCCChHHHH---H
Q 004085 74 IFLFNTGEEE--------GLNGAHSFVTQHP------------WSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVE---N 130 (774)
Q Consensus 74 iFlf~~aEE~--------gl~GS~~fv~~h~------------~~~~i~a~INLD~~G~gg~~~lfq~g~~~~li~---~ 130 (774)
+|+++++||. |+.||++|++++. ..+++.++||+|++|.+++.....-+....+.+ .
T Consensus 162 ~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~~~~~~~~~~~~~~~~~l~~ 241 (329)
T 2afw_A 162 QLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA 241 (329)
T ss_dssp EEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSSCCBCCCCGGGHHHHHHHHH
T ss_pred EEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCCCceeeeccCcchHHHHHHH
Confidence 9999999998 9999999997641 246799999999999876654211011112221 1
Q ss_pred HHHHh---cCCCCcccchhccccCCC--CCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHH
Q 004085 131 FAAAA---KYPSGQVTAQDLFASGAI--TSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENML 205 (774)
Q Consensus 131 ~~~~a---~~P~~~~~~~d~f~~g~i--ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl 205 (774)
..+.. ............|..... ...+||.+|.+ .|||++++......++|||++||++++|+++++++++.+.
T Consensus 242 ~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt~~Dt~~~ld~~~l~~~~~~~~ 320 (329)
T 2afw_A 242 IEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQ 320 (329)
T ss_dssp HHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTCSSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCCCCCCchhhCCHHHHHHHHHHHH
Confidence 11211 100000001112221111 13599999999 7999999987766789999999999999999999999999
Q ss_pred HHHHHHh
Q 004085 206 AFLLQAA 212 (774)
Q Consensus 206 ~~v~~la 212 (774)
.++.+.-
T Consensus 321 ~~v~eyl 327 (329)
T 2afw_A 321 VFVLEYL 327 (329)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8887653
No 12
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.94 E-value=1.6e-26 Score=258.95 Aligned_cols=199 Identities=23% Similarity=0.263 Sum_probs=157.0
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcch
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGA 88 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS 88 (774)
...|||++++|+.....+++.|+++||+||++.+|||.||++|||+|||++|.|++. +++|+|+|++|++||.|+.||
T Consensus 202 ~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs 279 (421)
T 2ek8_A 202 TSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGS 279 (421)
T ss_dssp EEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHH
T ss_pred cccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhH
Confidence 478999999996210136789999999999999999999999999999999999873 678999999999999999999
Q ss_pred HHHHhhCC--CccCceEEEEeccCCCCCCc-ceeecCC-ChHHHHHH----HHHhcCCCCcccchhccccCCCCCCCchH
Q 004085 89 HSFVTQHP--WSTTIRVAIDLEAMGIGGKS-GLFQAGP-HPWAVENF----AAAAKYPSGQVTAQDLFASGAITSATDFQ 160 (774)
Q Consensus 89 ~~fv~~h~--~~~~i~a~INLD~~G~gg~~-~lfq~g~-~~~li~~~----~~~a~~P~~~~~~~d~f~~g~ips~TD~~ 160 (774)
++|+++++ +.+++.++||+|++|..+.. .....+. .+.+...+ .+....| . ... ...+|||.
T Consensus 280 ~~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~~-----~~~~SD~~ 349 (421)
T 2ek8_A 280 KKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L---PYG-----QEGRSDHE 349 (421)
T ss_dssp HHHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C---CEE-----ECCSSTHH
T ss_pred HHHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C---CCC-----CCCCCccH
Confidence 99998875 35789999999999986652 2223222 11222222 1212222 1 011 12479999
Q ss_pred HHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 004085 161 VYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKG 220 (774)
Q Consensus 161 ~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~~~~l~~~ 220 (774)
+|.+ .|||++.+......++|||++||+|+++++.++++++.+..+++++++.+.+|.+
T Consensus 350 ~F~~-~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~ 408 (421)
T 2ek8_A 350 SFHA-LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIE 408 (421)
T ss_dssp HHHT-TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred HHHH-CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 9998 9999998765555578999999999999999999999999999999999988754
No 13
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.92 E-value=5.6e-25 Score=235.61 Aligned_cols=201 Identities=21% Similarity=0.292 Sum_probs=151.9
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcC--------CCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCC
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVF--------AAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTG 80 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~--------~spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~a 80 (774)
+..|||++++|+. .+++.|+++||+|+++ .++||.||++|||++||++|.|++.+.+++++|+|+++++
T Consensus 74 ~~~nvi~~~~g~~---~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~ 150 (299)
T 1rtq_A 74 NQKSVVMTITGSE---APDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAA 150 (299)
T ss_dssp EEEEEEEEECCSS---EEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESC
T ss_pred CCceEEEEEECCC---CCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECC
Confidence 3589999998862 2457899999999986 2799999999999999999999988778999999999999
Q ss_pred cCCCCcchHHHHhhCCC-ccCceEEEEeccCCCCCC--cceeecCC-ChHHHHHHHHHhc--CCCCcccchhccccCCCC
Q 004085 81 EEEGLNGAHSFVTQHPW-STTIRVAIDLEAMGIGGK--SGLFQAGP-HPWAVENFAAAAK--YPSGQVTAQDLFASGAIT 154 (774)
Q Consensus 81 EE~gl~GS~~fv~~h~~-~~~i~a~INLD~~G~gg~--~~lfq~g~-~~~li~~~~~~a~--~P~~~~~~~d~f~~g~ip 154 (774)
||.|+.||+.|+++++. .+++.++||+|++|..|+ .+.+.... ++.+.+...+.++ .|. . ..+ +.. ...
T Consensus 151 EE~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~~~~~-i--~~~-~~~-~~~ 225 (299)
T 1rtq_A 151 EEVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDEYLPS-L--TYG-FDT-CGY 225 (299)
T ss_dssp GGGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHHHCTT-C--CEE-EEC-CSS
T ss_pred ccCCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHHhCcc-C--Ccc-cCC-CCC
Confidence 99999999999987753 478899999999986443 23343322 4444332222111 111 0 011 111 112
Q ss_pred CCCchHHHhhcCCCeEEEEee---eCCCCCCCCcCCCcCCCCH--HHHHHHHHHHHHHHHHHhcCCCCC
Q 004085 155 SATDFQVYKEVAGLSGLDFAY---TDKSAVYHTKNDKLDLLKP--GSLQHLGENMLAFLLQAASSTSLP 218 (774)
Q Consensus 155 s~TD~~~F~~~~GIPgld~a~---~~~~~~YHT~~Dt~d~id~--~slq~~g~~vl~~v~~la~~~~l~ 218 (774)
.+|||.+|.+ .|||++.+.. .+..++|||+.||++++|+ ..++++++.+.+++++|++++.+.
T Consensus 226 ~~sD~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~ 293 (299)
T 1rtq_A 226 ACSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDT 293 (299)
T ss_dssp CCSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred CCCcHHHHHH-CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 5799999998 8999986532 2244789999999999998 588999999999999999987754
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.86 E-value=5.2e-21 Score=209.80 Aligned_cols=186 Identities=16% Similarity=0.145 Sum_probs=140.6
Q ss_pred ccceEEEEE--cCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCc
Q 004085 9 DLNHIVLRI--QPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLN 86 (774)
Q Consensus 9 ~~~NVI~~i--~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~ 86 (774)
+..+.++++ +|+ +++.|+++||+||.. +|+||+||+|+++|+||+|++ .+++++++|+|++ |..
T Consensus 164 ~G~l~y~e~~ipG~-----t~~~IllsaH~cHP~---~ANDNaSG~a~lleLar~l~~--~~~~~t~rFvf~p----g~i 229 (435)
T 3k9t_A 164 DGSLTYGEYYIRGE-----LEEEILLTTYTCHPS---MCNDNLSGVALITFIAKALSK--LKTKYSYRFLFAP----ETI 229 (435)
T ss_dssp SCEEEEEEEEECCS-----SSCEEEEEEECCCCS---CTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEEC----TTH
T ss_pred CCceEEEEEEecCC-----CCCEEEEEEEcCCCC---CCCccchHHHHHHHHHHHHhc--CCCCceEEEEEcC----ccH
Confidence 344555555 775 468999999999954 799999999999999999986 4689999999998 689
Q ss_pred chHHHHhhCCC-ccCceEEEEeccCCCCCCcceeecCC-ChHHHHHHHH-HhcCCCCcccchhccccCCCCCCCchHHHh
Q 004085 87 GAHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAA-AAKYPSGQVTAQDLFASGAITSATDFQVYK 163 (774)
Q Consensus 87 GS~~fv~~h~~-~~~i~a~INLD~~G~gg~~~lfq~g~-~~~li~~~~~-~a~~P~~~~~~~d~f~~g~ips~TD~~~F~ 163 (774)
||..|+++|+. .+++++.+|+||+|.++... +..+. ++++++...+ ..++-....... . ..+.++||++|.
T Consensus 230 GS~~yl~~~~~~l~~i~a~lnLDmVGd~~~~~-y~~sr~g~~~~d~~~~~vl~~~~~~~~~~-~----f~~~GSDh~qF~ 303 (435)
T 3k9t_A 230 GSITWLSRNEDKLKNIKMGLVATCVGDAGIKN-YKRTKFGDAEIDKIVEKVLMHCGSEYYVA-D----FFPWGSDERQFS 303 (435)
T ss_dssp HHHHHHHHCGGGGGGEEEEEECCSCCSSSCEE-EECCTTSSSHHHHHHHHHHHHSSSCEEEE-C----CCSCSSTHHHHT
T ss_pred HHHHHHHhChHhhhceEEEEEEEEecCCCCce-eecCCCCChHHHHHHHHHHhhcCCCCcee-c----CCCCCCcchhHh
Confidence 99999999864 47999999999999876433 33233 3444443332 222210000001 1 234579999999
Q ss_pred hcCC--CeEEEEeeeCC-CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 004085 164 EVAG--LSGLDFAYTDK-SAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASST 215 (774)
Q Consensus 164 ~~~G--IPgld~a~~~~-~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~~~ 215 (774)
+ .| ||...+.-... .+.|||+.||+++|+++.|+...+.+..++..|-+..
T Consensus 304 s-pG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 304 S-PGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp S-TTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred h-CCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 9 88 99998765322 5689999999999999999999999999999988753
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.51 E-value=2.3e-13 Score=143.19 Aligned_cols=191 Identities=17% Similarity=0.171 Sum_probs=134.5
Q ss_pred CceEEEe---ccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC---------------------CCCCCChhHHHHHHH
Q 004085 2 GRTLIYS---DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLE 57 (774)
Q Consensus 2 g~~~~y~---~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s---------------------pGA~DngsGvAvmLE 57 (774)
|...... +..|+++++ |+ +.+.|++.+|+|+++.+ +|+.||.+|++++|+
T Consensus 40 G~~~~~~~~~~~~nv~a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~ 113 (269)
T 4h2k_A 40 GFQIEWMPFNDTLNLWAKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIV 113 (269)
T ss_dssp TCEEEECCBTTBCEEEEEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHH
T ss_pred CCeEEEEEcCCceEEEEEe-CC-----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHH
Confidence 5544333 467999998 53 34689999999999853 599999999999999
Q ss_pred HHHHHHHcCCCCCccEEEEEeCCcCCCCc-chHHHHhhCC-CccCceEEEEeccCCCC--CCcc-eeecC-----CChHH
Q 004085 58 LARAMSQWAHGFKNAVIFLFNTGEEEGLN-GAHSFVTQHP-WSTTIRVAIDLEAMGIG--GKSG-LFQAG-----PHPWA 127 (774)
Q Consensus 58 laR~L~~~~~~p~~~IiFlf~~aEE~gl~-GS~~fv~~h~-~~~~i~a~INLD~~G~g--g~~~-lfq~g-----~~~~l 127 (774)
++|.|++.+.+++++|+|+|+.+||.|.. ||+.+++... ...+..++|+.|..+.. +..+ .-+.| .+..+
T Consensus 114 a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l 193 (269)
T 4h2k_A 114 AAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKL 193 (269)
T ss_dssp HHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HH
T ss_pred HHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHH
Confidence 99999987667889999999999999985 9999986532 13567889999977532 1111 00111 11235
Q ss_pred HHHHHHHhc----CCCCcccchhccccCCCCCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHH
Q 004085 128 VENFAAAAK----YPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGEN 203 (774)
Q Consensus 128 i~~~~~~a~----~P~~~~~~~d~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~ 203 (774)
++...++++ .+.. .. ....+||.+.+.. .|+|.+.+.... ..+||+. |.++.+.+++..+.
T Consensus 194 ~~~l~~aa~~~~gi~~~------~~---~~gggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~---E~v~~~d~~~~~~l 258 (269)
T 4h2k_A 194 LDSITSAIEETIGITPK------AE---TGGGTSDGRFIAL-MGAEVVEFGPLN--STIHKVN---ECVSVEDLGKCGEI 258 (269)
T ss_dssp HHHHHHHHHHHHSCCCE------EE---CC--CHHHHHHHT-TTCEEEECCSBC--TTTTSTT---CEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCE------Ee---cCCCCchHHHHHh-hCCCEEEEEeCC--CCCcCCc---ccccHHHHHHHHHH
Confidence 554443322 2211 11 1125799999987 899999875433 4569998 57889999999999
Q ss_pred HHHHHHHHhc
Q 004085 204 MLAFLLQAAS 213 (774)
Q Consensus 204 vl~~v~~la~ 213 (774)
+..+++++.+
T Consensus 259 l~~~l~~l~~ 268 (269)
T 4h2k_A 259 YHKMLVNLLD 268 (269)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhh
Confidence 9999998865
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.49 E-value=1.7e-13 Score=143.97 Aligned_cols=188 Identities=19% Similarity=0.170 Sum_probs=132.5
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC---------------------CCCCCChhHHHHHHHHHHHHHHcCC
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWAH 67 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s---------------------pGA~DngsGvAvmLElaR~L~~~~~ 67 (774)
+..|+++++ |+ +.+.|++.+|+|+++.+ +|+.||.+|++++|+++|.|++.+.
T Consensus 50 ~~~nv~a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~ 123 (268)
T 3t68_A 50 DTTNFWARR-GT-----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHP 123 (268)
T ss_dssp TEEC-CEEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCT
T ss_pred CccEEEEEe-CC-----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCC
Confidence 557999998 53 24689999999999753 5999999999999999999988766
Q ss_pred CCCccEEEEEeCCcCCCC-cchHHHHhhCC-CccCceEEEEeccCCCC--CCcc-eeecC-----CChHHHHHHHHHhcC
Q 004085 68 GFKNAVIFLFNTGEEEGL-NGAHSFVTQHP-WSTTIRVAIDLEAMGIG--GKSG-LFQAG-----PHPWAVENFAAAAKY 137 (774)
Q Consensus 68 ~p~~~IiFlf~~aEE~gl-~GS~~fv~~h~-~~~~i~a~INLD~~G~g--g~~~-lfq~g-----~~~~li~~~~~~a~~ 137 (774)
+++++|+|+|+.+||.|. .||+.++++.. ...+..++|+.|..+.. |..+ .-+.| ++..+.+...++++.
T Consensus 124 ~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~ 203 (268)
T 3t68_A 124 DHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEE 203 (268)
T ss_dssp TCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHH
Confidence 788999999999999998 59999986532 23567899999987532 1111 11111 122355555443221
Q ss_pred CCCcccchhccccCCCCCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 138 PSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 138 P~~~~~~~d~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
-.+.. .... ....+||...|.+ .|+|++.+.. ....+||+. |.++.+.+++..+.+.+++++|.+
T Consensus 204 ~~gi~--~~~~---~sgggtD~~~~~~-~g~p~~~~~~--~~~~~Hs~~---E~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 204 VNHQA--PALL---TTGGTSDGRFIAQ-MGAQVVELGP--VNATIHKVN---ECVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp HHSSC--CEEE---SSCCCHHHHHHHH-HTCEEEECCS--BCTTTTSTT---CEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred HhCCC--cEEe---cCccccHHHHHHh-cCCCEEEEee--CCCCCCCcc---ccccHHHHHHHHHHHHHHHHHHhC
Confidence 00110 0010 1124799999997 7999987644 234569998 577889999999999999988864
No 17
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.33 E-value=7.4e-12 Score=137.78 Aligned_cols=149 Identities=18% Similarity=0.199 Sum_probs=105.4
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCCC----------
Q 004085 45 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG---------- 114 (774)
Q Consensus 45 A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~gg---------- 114 (774)
|.||.+|+|++|+++|.+++. .++++|+|+|++.||.|+.|++.+.... +..++|++|+.+.++
T Consensus 182 ~~D~k~g~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~G~~G~~~~~~~~----~~d~~i~~d~~~~~~~~g~~~~~~~ 255 (373)
T 1vhe_A 182 AWDNRIGCAIAIDVLRNLQNT--DHPNIVYGVGTVQEEVGLRGAKTAAHTI----QPDIAFGVDVGIAGDTPGISEKEAQ 255 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHTS--CCSSEEEEEEESCCTTTSHHHHHHHHHH----CCSEEEEEEEEECCCSTTCCTTTCC
T ss_pred cCccHHHHHHHHHHHHHHhhc--CCCceEEEEEECCcccChhhHHHHhccc----CCCEEEEEeccccCCCCCCcccccc
Confidence 899999999999999999875 3679999999999999999999886422 345788888866432
Q ss_pred ------Ccce-eecC--CChHHHHHHHHHhc---CCCCcccchhccccCCCCCCCchHHH--hhcCCCeEEEEeeeCCCC
Q 004085 115 ------KSGL-FQAG--PHPWAVENFAAAAK---YPSGQVTAQDLFASGAITSATDFQVY--KEVAGLSGLDFAYTDKSA 180 (774)
Q Consensus 115 ------~~~l-fq~g--~~~~li~~~~~~a~---~P~~~~~~~d~f~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~ 180 (774)
+..- +..+ .++.+.+...+.++ .|... +.. ...+||...| .. .|+|.+++..- ..
T Consensus 256 ~~lg~G~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~~~----~~~----~~ggtDa~~~~~~~-~GiPtv~lg~~--~~ 324 (373)
T 1vhe_A 256 SKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQF----DAI----AGGGTDSGAIHLTA-NGVPALSITIA--TR 324 (373)
T ss_dssp CCTTSCCEEEEEETTEECCHHHHHHHHHHHHHHTCCCEE----EEE----TTCCCTHHHHTTST-TCCCEEEEEEE--EB
T ss_pred cccCCCceEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE----ecC----CCCCccHHHHHHhC-CCCcEEEEccc--cc
Confidence 1110 0011 24556655544332 22211 011 2357999999 44 79999987543 23
Q ss_pred CCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 181 VYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 181 ~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
.+||+. |.++.+.+++..+.+.++++++++
T Consensus 325 ~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 325 YIHTHA---AMLHRDDYENAVKLITEVIKKLDR 354 (373)
T ss_dssp STTSSC---EEEEHHHHHHHHHHHHHHHHHCCH
T ss_pred cCCChh---heecHHHHHHHHHHHHHHHHHhcH
Confidence 579985 778899999999999999998865
No 18
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.33 E-value=6.8e-12 Score=136.94 Aligned_cols=150 Identities=19% Similarity=0.187 Sum_probs=105.5
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCCCCcc-------
Q 004085 45 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSG------- 117 (774)
Q Consensus 45 A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~gg~~~------- 117 (774)
|.||.+|+|++|+++|.+++ ++++|+|+|++.||.|+.||+.+... .+..++|++|+.+.++...
T Consensus 180 a~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~ 251 (353)
T 1y0y_A 180 AFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQV 251 (353)
T ss_dssp THHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCC
T ss_pred cCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCc
Confidence 69999999999999999864 67899999999999999999998742 2346789999876432110
Q ss_pred --------e-e---ecCCChHHHHHHHHHhcCCCCcccchhccccCCCCCCCchHHH--hhcCCCeEEEEeeeCCCCCCC
Q 004085 118 --------L-F---QAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVY--KEVAGLSGLDFAYTDKSAVYH 183 (774)
Q Consensus 118 --------l-f---q~g~~~~li~~~~~~a~~P~~~~~~~d~f~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~~YH 183 (774)
+ + ....++.+.+..++.++.- +.....+. ..+..||...| .. .|+|.+++..- ...+|
T Consensus 252 ~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~~-gi~~~~~~----~~~ggsDa~~~~~~~-~GiPtv~lg~~--~~~~H 323 (353)
T 1y0y_A 252 THLGKGTAIKIMDRSVICHPTIVRWLEELAKKH-EIPYQLEI----LLGGGTDAGAIHLTK-AGVPTGALSVP--ARYIH 323 (353)
T ss_dssp CCTTSCEEEEEEETTEECCHHHHHHHHHHHHHT-TCCEEEEE----CSSCCCTHHHHTTST-TCCCEEEEEEE--EBSCS
T ss_pred cccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHc-CCCEEEee----cCCCCchHHHHHHhC-CCCcEEEEccc--ccccC
Confidence 0 0 0112456666655543211 11110101 12357999999 44 79999987643 24589
Q ss_pred CcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 184 TKNDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 184 T~~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
|+. |.++.+.+.+..+.+..++.++.+
T Consensus 324 s~~---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 324 SNT---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp SSC---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred CHH---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 975 777899999999999999998865
No 19
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.30 E-value=1e-11 Score=134.15 Aligned_cols=148 Identities=18% Similarity=0.190 Sum_probs=104.1
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCC-----------
Q 004085 45 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIG----------- 113 (774)
Q Consensus 45 A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~g----------- 113 (774)
|.||.+|+|++|+++|.+++.+ ++++|.|+|++.||.|+.|++.+++. .+..++|++|+.+..
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~ 244 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGK 244 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTS
T ss_pred cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCC
Confidence 6999999999999999998753 67999999999999999999999742 235688999987653
Q ss_pred CCccee---ecCCChHHHHHHHHHhcCCCCcccchhccccCCCCCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcC
Q 004085 114 GKSGLF---QAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLD 190 (774)
Q Consensus 114 g~~~lf---q~g~~~~li~~~~~~a~~P~~~~~~~d~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d 190 (774)
|..+-+ ....++.+.+...+.++.- +... +....+.+||...|.. |+|.+++..- ...+||+. |
T Consensus 245 G~~i~~~d~~~~~~~~l~~~l~~~~~~~-gi~~-----~~~~~~ggtDa~~~~~--GiPtv~lg~~--~~~~Hs~~---E 311 (332)
T 2wyr_A 245 GPVIRAVDNSAIYSRDLARKVWSIAEKN-GIEI-----QIGVTGGGTDASAFQD--RSKTLALSVP--IKYLHSEV---E 311 (332)
T ss_dssp CCEEEEECSSCBCCHHHHHHHHHHHHHT-TCCC-----EEEECSSCCGGGGGTT--TSEEEEEECE--EBSCSSTT---C
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-CCCe-----EEecCCCCchHHHHHc--CCCEEEEcCC--cCCCCChh---h
Confidence 111111 1112556666655543211 2111 1111236799999987 9999987532 34589975 7
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 004085 191 LLKPGSLQHLGENMLAFLLQA 211 (774)
Q Consensus 191 ~id~~slq~~g~~vl~~v~~l 211 (774)
.++.+.+++..+.+..+++++
T Consensus 312 ~v~~~dl~~~~~ll~~~~~~l 332 (332)
T 2wyr_A 312 TLHLNDLEKLVKLIEALAFEL 332 (332)
T ss_dssp EEEHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHHHHhC
Confidence 778899999999988887653
No 20
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.29 E-value=1.6e-11 Score=133.81 Aligned_cols=145 Identities=15% Similarity=0.189 Sum_probs=92.5
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCCC-C-----cce
Q 004085 45 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG-K-----SGL 118 (774)
Q Consensus 45 A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~gg-~-----~~l 118 (774)
+.||.+|++++|+++|.+++.+.+++++|.|+|++.||.|+.|++.+ ..+..++|++|+.+.++ + ...
T Consensus 184 ~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~ 257 (349)
T 2gre_A 184 HLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVS 257 (349)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEE
T ss_pred eccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceE
Confidence 69999999999999999998777788999999999999999999976 23577899999987653 2 111
Q ss_pred e----ecCC-ChHHHHHHHHHh---cCCCCcccchhccccCCCCCCCchHHHhh-cCCCeEEEEeeeCCCCCCCCcCCCc
Q 004085 119 F----QAGP-HPWAVENFAAAA---KYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKL 189 (774)
Q Consensus 119 f----q~g~-~~~li~~~~~~a---~~P~~~~~~~d~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~ 189 (774)
. +.++ ++.+.+..++.+ ..|+.. +.. ...+||+.+|.. ..|+|.+++.. . ....|| .
T Consensus 258 i~~~~~~~~~~~~l~~~l~~~a~~~gi~~q~----~~~----~ggGsDa~~~~~~~~GiPt~~lg~-~-~~~~Hs----~ 323 (349)
T 2gre_A 258 ICAKDSSGPYHYALRKHLVELAKTNHIEYKV----DIY----PYYGSDASAAIRAGFDVKHALIGA-G-IDSSHA----F 323 (349)
T ss_dssp EEEEETTEECCHHHHHHHHHHHHHHTCCEEE----EEC----SCC--------CCSSSCEEEEEEE-C-CBSTTS----S
T ss_pred EEEccCCCCCCHHHHHHHHHHHHHcCCCcEE----ecc----CCCCccHHHHHHhCCCCcEEEecc-C-cccccc----c
Confidence 1 1122 566666555443 223211 111 135799988842 36999997743 2 345787 5
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 004085 190 DLLKPGSLQHLGENMLAFLL 209 (774)
Q Consensus 190 d~id~~slq~~g~~vl~~v~ 209 (774)
|.++.+.+.+..+.+.+++.
T Consensus 324 E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 324 ERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp EEEEHHHHHHHHHHHHHHHH
T ss_pred eeccHHHHHHHHHHHHHHHh
Confidence 78889999988888877765
No 21
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.21 E-value=2.2e-11 Score=132.24 Aligned_cols=148 Identities=17% Similarity=0.181 Sum_probs=89.4
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCC---CCc-----
Q 004085 45 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIG---GKS----- 116 (774)
Q Consensus 45 A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~g---g~~----- 116 (774)
|.||.+|++++|+++|.++ +++++|+|++++.||.|+.|++.++++ .+..++|++|+.+.+ |+.
T Consensus 165 a~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~ 236 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWA 236 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSS
T ss_pred cCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCC
Confidence 6899999999999999986 478999999999999999999999863 233578888876432 211
Q ss_pred ------ceee---cC--CChHHHHHHHHHh---cCCCCcccchhccccCCCCCCCchHHHhh-cCCCeEEEEeeeCCCCC
Q 004085 117 ------GLFQ---AG--PHPWAVENFAAAA---KYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAV 181 (774)
Q Consensus 117 ------~lfq---~g--~~~~li~~~~~~a---~~P~~~~~~~d~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~ 181 (774)
.+.. .+ .++.+.+...+.+ ..|... +. ..+.+||...|.. ..|+|.+.+..-. ..
T Consensus 237 ~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~~~----~~----~~~ggtDa~~~~~~~~GiP~v~~g~~~--~~ 306 (340)
T 2fvg_A 237 THLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPFQM----KR----RTAGGTDAGRYARTAYGVPAGVISTPA--RY 306 (340)
T ss_dssp CCTTSCCEECSCCSSSCCCHHHHHHHHHHHHHTTCCCEE----CC----CC-------------CCSCEEEEEEEE--EE
T ss_pred cccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE----Ee----cCCCCccHHHHHhhCCCCcEEEecccc--cc
Confidence 0011 11 1445555544432 222211 10 1235799999874 2699999775432 23
Q ss_pred CCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 182 YHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 182 YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
+||+. |.++.+.+++..+.+..+++++++
T Consensus 307 ~Hs~~---E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 307 IHSPN---SIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp SSTTC---EEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred cCChh---hcccHHHHHHHHHHHHHHHHhccc
Confidence 89986 677899999999999999998875
No 22
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.10 E-value=3e-10 Score=114.06 Aligned_cols=95 Identities=27% Similarity=0.335 Sum_probs=76.5
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------------CCCCCCChhHHHHHHHHHHHHHHcCC
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAH 67 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------------spGA~DngsGvAvmLElaR~L~~~~~ 67 (774)
+..|++++++|+. ...+.|++.+|+|+++. ++||.||.+|+|++|+++|.|++.+.
T Consensus 57 g~~~~i~~~~g~~---~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~ 133 (198)
T 1q7l_A 57 GYVVTVLTWPGTN---PTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGH 133 (198)
T ss_dssp TEEEEEEEECCSS---TTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTC
T ss_pred CCeEEEEEEccCC---CCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCC
Confidence 3569999998752 23478999999999763 47899999999999999999998877
Q ss_pred CCCccEEEEEeCCcCCC-CcchHHHHhhCCC-ccCceEEEE
Q 004085 68 GFKNAVIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAID 106 (774)
Q Consensus 68 ~p~~~IiFlf~~aEE~g-l~GS~~fv~~h~~-~~~i~a~IN 106 (774)
+++++|+|+|+.+||.| +.|++.++++++. ..+..+++|
T Consensus 134 ~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id 174 (198)
T 1q7l_A 134 RFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALD 174 (198)
T ss_dssp CCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEE
T ss_pred CCCCCEEEEEEcccccCccccHHHHHHhHHhccCCcCEEEe
Confidence 88999999999999997 8999999864322 123445554
No 23
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=98.97 E-value=3.1e-09 Score=120.11 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=82.0
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------------CCCCCCChhHHHHHHHHHHHHHHcCCCC
Q 004085 11 NHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGF 69 (774)
Q Consensus 11 ~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------------spGA~DngsGvAvmLElaR~L~~~~~~p 69 (774)
.||++++.+. .+.+.|++.+|+|+++. ++|+.||..|+|++|++++.|++.+.++
T Consensus 83 ~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~ 158 (479)
T 2zog_A 83 PILLGKLGSD----PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEI 158 (479)
T ss_dssp CEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEEecCC----CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCC
Confidence 7999999663 24578999999999864 3788999999999999999999887788
Q ss_pred CccEEEEEeCCcCCCCcchHHHHhhCC--CccCceEEEEeccC
Q 004085 70 KNAVIFLFNTGEEEGLNGAHSFVTQHP--WSTTIRVAIDLEAM 110 (774)
Q Consensus 70 ~~~IiFlf~~aEE~gl~GS~~fv~~h~--~~~~i~a~INLD~~ 110 (774)
+++|+|+|+.+||.|..|++.++++++ +.+++.+++++|..
T Consensus 159 ~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~ 201 (479)
T 2zog_A 159 PVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNY 201 (479)
T ss_dssp SSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCB
T ss_pred CCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCCC
Confidence 899999999999999999999998764 33467788888853
No 24
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.90 E-value=5.6e-09 Score=113.81 Aligned_cols=100 Identities=25% Similarity=0.258 Sum_probs=80.9
Q ss_pred CceEEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCC-------------------CCCCCCChhHHHHHHHHHHHH
Q 004085 2 GRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA-------------------AEGAGDCSSCVAVMLELARAM 62 (774)
Q Consensus 2 g~~~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~-------------------spGA~DngsGvAvmLElaR~L 62 (774)
|...... ..|++++++|+. .+.+.|++.+|+|+++. ++|+.|+.+|+|++|++++.|
T Consensus 45 g~~~~~~-~~nv~a~~~g~~---~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l 120 (356)
T 3ct9_A 45 GMQTGRK-GNNVWCLSPMFD---LKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQL 120 (356)
T ss_dssp TCCEEEE-TTEEEEECSSCC---TTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHH
T ss_pred CCeEEEE-eeeEEEEEecCC---CCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHH
Confidence 4443333 789999998731 24578999999999864 478889999999999999999
Q ss_pred HHcCCCCCccEEEEEeCCcCC-CCcchHHHHhhCCCccCceEEEEeccC
Q 004085 63 SQWAHGFKNAVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEAM 110 (774)
Q Consensus 63 ~~~~~~p~~~IiFlf~~aEE~-gl~GS~~fv~~h~~~~~i~a~INLD~~ 110 (774)
++.+ ++++|+|+|+.+||. |+.|++.++++.+ +..+.++.|..
T Consensus 121 ~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 121 CRTS--QNYNLIYLASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp TTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred HhcC--CCCCEEEEEEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 9865 789999999999999 9999999997653 34567777764
No 25
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=98.85 E-value=7e-09 Score=114.27 Aligned_cols=94 Identities=24% Similarity=0.414 Sum_probs=79.3
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccCcCC-----------------CCCCCCChhHHHHHHHHHHHHHHcCCCCCccE
Q 004085 11 NHIVLRIQPKYASEAAENAILVSSHIDTVFA-----------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAV 73 (774)
Q Consensus 11 ~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~-----------------spGA~DngsGvAvmLElaR~L~~~~~~p~~~I 73 (774)
.||+++++|+ . ++.|++.+|+|+++. ++|+.|+..|++++|+++|.|++.+.+++++|
T Consensus 71 ~~v~a~~~g~----~-~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 145 (393)
T 1cg2_A 71 DNIVGKIKGR----G-GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTI 145 (393)
T ss_dssp EEEEEEEECS----S-CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEE
T ss_pred CeEEEEECCC----C-CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCE
Confidence 5999999874 1 367999999999874 37999999999999999999998776777799
Q ss_pred EEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCC
Q 004085 74 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 111 (774)
Q Consensus 74 iFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G 111 (774)
+|+|..+||.|..|++.+++++. .++.+++++|..+
T Consensus 146 ~~~~~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 146 TVLFNTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp EEEEESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EEEEEcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 99999999999999999997532 3467788888654
No 26
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=98.81 E-value=1.9e-08 Score=114.22 Aligned_cols=96 Identities=15% Similarity=0.191 Sum_probs=82.6
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------------CCCCCCChhHHHHHHHHHHHHHHcCCCC
Q 004085 11 NHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGF 69 (774)
Q Consensus 11 ~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------------spGA~DngsGvAvmLElaR~L~~~~~~p 69 (774)
.||++++.+. .+.+.|++.+|+|+++. ++|+.||..|+|++|++++.|++.+.++
T Consensus 90 ~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~ 165 (485)
T 3dlj_A 90 PVILAELGSD----PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDL 165 (485)
T ss_dssp CEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred cEEEEEECCC----CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCC
Confidence 4899999653 34578999999999874 3899999999999999999999987788
Q ss_pred CccEEEEEeCCcCCCCcchHHHHhhCCC--ccCceEEEEeccC
Q 004085 70 KNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAIDLEAM 110 (774)
Q Consensus 70 ~~~IiFlf~~aEE~gl~GS~~fv~~h~~--~~~i~a~INLD~~ 110 (774)
+.+|+|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 166 ~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 166 PVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp SSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred CccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 9999999999999999999999987652 3578888998854
No 27
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=98.81 E-value=1.4e-08 Score=113.02 Aligned_cols=97 Identities=22% Similarity=0.189 Sum_probs=81.1
Q ss_pred eccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC---------------------CCCCCChhHHHHHHHHHHHHHHcC
Q 004085 8 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWA 66 (774)
Q Consensus 8 ~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s---------------------pGA~DngsGvAvmLElaR~L~~~~ 66 (774)
....||+++++|. .+.+.|++.+|+|+++.+ +|+.|+..|+|++|+++|.|++.+
T Consensus 88 ~~~~~via~~~g~----~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~ 163 (433)
T 3pfo_A 88 AGSMQVVATADSD----GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAG 163 (433)
T ss_dssp GGCEEEEEEECCC----CCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEEecC----CCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcC
Confidence 3568999999874 345789999999999743 499999999999999999999876
Q ss_pred CCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCC
Q 004085 67 HGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 111 (774)
Q Consensus 67 ~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G 111 (774)
.+++++|.|+|..+||.|..|++.++++. .+..++|+.|..+
T Consensus 164 ~~~~~~v~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 164 YAPDARVHVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp EEESSCEEEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred CCCCccEEEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 67889999999999999889999998643 2466778888554
No 28
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=98.80 E-value=1.1e-08 Score=115.96 Aligned_cols=98 Identities=14% Similarity=0.206 Sum_probs=79.4
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------------CCCCCCChhHHHHHHHHHHHHHHcCCC
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHG 68 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------------spGA~DngsGvAvmLElaR~L~~~~~~ 68 (774)
..||+++++|+. .+.+.|++.+|+|+++. ++|+.||.+|+|++|+++|.|++.+.+
T Consensus 92 ~~~v~a~~~g~~---~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~ 168 (481)
T 2pok_A 92 APFVMAHFKSSR---PDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDD 168 (481)
T ss_dssp SCEEEEEECCSS---TTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSS
T ss_pred CcEEEEEecCCC---CCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCC
Confidence 589999998741 24578999999999763 478999999999999999999987557
Q ss_pred CCccEEEEEeCCcCCCCcchHHHHhhCCC-ccCceEEEEeccC
Q 004085 69 FKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAIDLEAM 110 (774)
Q Consensus 69 p~~~IiFlf~~aEE~gl~GS~~fv~~h~~-~~~i~a~INLD~~ 110 (774)
++++|+|+|+.+||.|..|++.++++++. .+++.++++.|..
T Consensus 169 ~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~~ 211 (481)
T 2pok_A 169 LPVNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGT 211 (481)
T ss_dssp CSSEEEEEEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCCB
T ss_pred CCCCEEEEEecccccCchhHHHHHHHhHhhccCCCEEEECCCC
Confidence 88999999999999999999999876421 1225667777653
No 29
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=98.78 E-value=1.4e-08 Score=112.55 Aligned_cols=89 Identities=20% Similarity=0.275 Sum_probs=76.6
Q ss_pred CceEEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCc
Q 004085 2 GRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGE 81 (774)
Q Consensus 2 g~~~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aE 81 (774)
|.....+...||+++++|+. .+.+.|+++||+|+++. .|+.|+.+|++++|+++|.|++.+.+++++|.|+|+.+|
T Consensus 49 g~~~~~d~~gnv~a~~~g~~---~~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~E 124 (408)
T 3n5f_A 49 GLFVYEDAAGNLIGRKEGTN---PDATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDE 124 (408)
T ss_dssp TCEEEECTTCCEEEEECCSS---TTSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCS
T ss_pred CCEEEEcCCCCEEEEecCCC---CCCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCc
Confidence 55556667789999999862 23679999999999984 588999999999999999999987788999999999999
Q ss_pred CC-----CCcchHHHHhh
Q 004085 82 EE-----GLNGAHSFVTQ 94 (774)
Q Consensus 82 E~-----gl~GS~~fv~~ 94 (774)
|. |+.||+.++.+
T Consensus 125 E~~~~~~g~~Gs~~~~~~ 142 (408)
T 3n5f_A 125 EGARFRFGMIGSRAMAGT 142 (408)
T ss_dssp SCTTTTCCCHHHHHHHTC
T ss_pred cccccCCCCcCHHHHHcC
Confidence 95 78899999853
No 30
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=98.76 E-value=5.5e-08 Score=105.34 Aligned_cols=150 Identities=17% Similarity=0.160 Sum_probs=101.3
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCCCC---------
Q 004085 45 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGK--------- 115 (774)
Q Consensus 45 A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~gg~--------- 115 (774)
+.||..|+++++++++.+++. .++.++.++++..||.|+.|++...... ...+.|++|....++.
T Consensus 167 ~~D~k~g~aa~l~al~~l~~~--~~~~~~~~~~t~~EEvG~~Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~ 240 (348)
T 1ylo_A 167 AFDDRLSCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHR 240 (348)
T ss_dssp THHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCCTTSSHHHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCC
T ss_pred CcccHHHHHHHHHHHHHhhhc--CCCceEEEEEEcccccchhHHHHhhccc----CCCEEEEEeccccCCCCCCCccccc
Confidence 478999999999999999764 3668999999999999999998755322 1245688888765321
Q ss_pred ------cceee-cC--CChHHHHHHHHHh---cCCCCcccchhccccCCCCCCCchHHHhh-cCCCeEEEEeeeCCCCCC
Q 004085 116 ------SGLFQ-AG--PHPWAVENFAAAA---KYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVY 182 (774)
Q Consensus 116 ------~~lfq-~g--~~~~li~~~~~~a---~~P~~~~~~~d~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~Y 182 (774)
.+... .+ .++.+.+...+.+ ..|+.. +.. .+.+||...+.. ..|+|.+++.. .. ...
T Consensus 241 ~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~~~----~~~----~~ggsDa~~~~~~~~gipt~~lg~-~~-~~~ 310 (348)
T 1ylo_A 241 QIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQA----DMF----SNGGTDGGAVHLTGTGVPTLVMGP-AT-RHG 310 (348)
T ss_dssp CTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCCEE----EEC----SSCCCHHHHHHTSTTCCCEEEEEC-CC-BSC
T ss_pred cCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE----eec----CCCcchHHHHHHhcCCCCEEEECc-cc-CcC
Confidence 11111 11 1455555554433 233321 011 235799998853 26999997643 33 458
Q ss_pred CCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 183 HTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 183 HT~~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
||+. |.++.+.+....+.+.++++.+++
T Consensus 311 Hs~~---E~~~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 311 HCAA---SIADCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp SSSC---EEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred CCcc---eEeeHHHHHHHHHHHHHHHHHhhH
Confidence 9985 788899999999999999887653
No 31
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.75 E-value=6.8e-08 Score=104.71 Aligned_cols=152 Identities=14% Similarity=0.134 Sum_probs=96.7
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCCCCc--------
Q 004085 45 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKS-------- 116 (774)
Q Consensus 45 A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~gg~~-------- 116 (774)
+.||..|+++++|+++.+++. .++.++.++++..||.|+.|++...+ .... .+.|.+|....++..
T Consensus 170 ~~D~r~g~aa~l~al~~l~~~--~~~~~~~~~~t~~EEvG~~Ga~~~~~--~i~~--~~~i~~D~~~~~~~~~~~~~~~~ 243 (346)
T 1vho_A 170 ALDNRASCGVLVKVLEFLKRY--DHPWDVYVVFSVQEETGCLGALTGAY--EINP--DAAIVMDVTFASEPPFSDHIELG 243 (346)
T ss_dssp THHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEECTTSSSHHHHHHTTC--CCCC--SEEEEEEEECCCCTTSCCCCCTT
T ss_pred cCccHHHHHHHHHHHHHhhhc--CCCceEEEEEECCcccchhhHHHHhc--ccCC--CEEEEeecccccCCCCCcccccC
Confidence 478999999999999999764 35689999999999999999886442 2222 355777776543210
Q ss_pred --ceee--cCCChHHHHHHHHHhc---CCCCcccchhccccCCCCCCCchHHHhh-cCCCeEEEEeeeCCCCCCCCcCCC
Q 004085 117 --GLFQ--AGPHPWAVENFAAAAK---YPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDK 188 (774)
Q Consensus 117 --~lfq--~g~~~~li~~~~~~a~---~P~~~~~~~d~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt 188 (774)
.... ...++.+.+...+.++ .|+.. .... -+.+||...+.. ..|+|.+++.-- . ...|++.
T Consensus 244 ~g~~i~~~~~~~~~l~~~~~~~a~~~gi~~~~----~~~~---g~ggsDa~~~~~~~~gipt~~lg~~-~-~~~Hs~~-- 312 (346)
T 1vho_A 244 KGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQE----EAVG---GRSGTETDFVQLVRNGVRTSLISIP-L-KYMHTPV-- 312 (346)
T ss_dssp SCCEEECSTTSCHHHHHHHHHHHHHTTCCCEE----ESSC---CC----CTTHHHHHTTCEEEEEEEE-C-BSTTSTT--
T ss_pred CCceEEeCCcCCHHHHHHHHHHHHHCCCCEEE----EeCC---CCCCchHHHHHHhCCCCcEEEEehh-h-cccccHH--
Confidence 0111 1125556655554432 22211 1110 015788888842 379999987543 2 3489985
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcC
Q 004085 189 LDLLKPGSLQHLGENMLAFLLQAASS 214 (774)
Q Consensus 189 ~d~id~~slq~~g~~vl~~v~~la~~ 214 (774)
|.++.+.+++..+.+.+++..++..
T Consensus 313 -E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 313 -EMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp -EEECHHHHHHHHHHHHHHHHHCC--
T ss_pred -HhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 7888999999999999999987663
No 32
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=98.68 E-value=5.2e-08 Score=106.18 Aligned_cols=95 Identities=23% Similarity=0.242 Sum_probs=78.8
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCC--------------CCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEE
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF 75 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~--------------spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiF 75 (774)
..|++++++++ +.+.|++.+|+|+++. +.|+.|+..|+|++|++++.|++. .+++++|.|
T Consensus 57 ~~~~~a~~~~~-----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~ 130 (369)
T 3tx8_A 57 NNNVLARTNRG-----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTL 130 (369)
T ss_dssp TTEEEEECCCC-----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEE
T ss_pred CCcEEEEecCC-----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEE
Confidence 46999999774 3578999999999985 389999999999999999999863 467899999
Q ss_pred EEeCCcCCCC--cchHHHHhhCCCccCceEEEEeccC
Q 004085 76 LFNTGEEEGL--NGAHSFVTQHPWSTTIRVAIDLEAM 110 (774)
Q Consensus 76 lf~~aEE~gl--~GS~~fv~~h~~~~~i~a~INLD~~ 110 (774)
+|..+||.|. .|++.++++++..-+..++|+.|..
T Consensus 131 ~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 131 IAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp EEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred EEEeccccCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 9999999987 7999999877432345667777754
No 33
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=98.64 E-value=3.4e-08 Score=110.47 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=79.9
Q ss_pred Cce-EEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCC-------------------------------------
Q 004085 2 GRT-LIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAE------------------------------------- 43 (774)
Q Consensus 2 g~~-~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~sp------------------------------------- 43 (774)
|.. ...++..||+++++|+. ..+.+.|++.+|+|+++..+
T Consensus 71 G~~~~~~d~~~nv~a~~~g~~--~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~ 148 (434)
T 3ife_A 71 GLTEVTMDDNGYVMATLPANT--DKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPS 148 (434)
T ss_dssp TCEEEEECTTSCEEEEECCBS--SSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGG
T ss_pred CCceEEECCCcEEEEEeCCCC--CCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHh
Confidence 554 45567889999998862 12357899999999997411
Q ss_pred ----------C----CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEecc
Q 004085 44 ----------G----AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEA 109 (774)
Q Consensus 44 ----------G----A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~ 109 (774)
| +.||..|+|++|++++.|++.+..++++|.|+|..+||.| .|++.+..+. -++.+++++|.
T Consensus 149 ~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~---~~~d~~~~~d~ 224 (434)
T 3ife_A 149 YKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA---FGASFAYMMDG 224 (434)
T ss_dssp GTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH---HCCSEEEECCC
T ss_pred hcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh---cCCCEEEEecC
Confidence 2 4899999999999999999877778999999999999999 8998764221 14677788884
No 34
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=98.63 E-value=3.7e-08 Score=107.60 Aligned_cols=93 Identities=24% Similarity=0.250 Sum_probs=75.3
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------CCCCCCChhHHHHHHHHHHHHHHcCCCC---Ccc
Q 004085 11 NHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------AEGAGDCSSCVAVMLELARAMSQWAHGF---KNA 72 (774)
Q Consensus 11 ~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------spGA~DngsGvAvmLElaR~L~~~~~~p---~~~ 72 (774)
.|+++++.|+. ..+++.|++.+|+|+++. ++|+.|+..|+|++|+++|.|++.+.++ +++
T Consensus 51 ~~~~~~~~~~~--~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~ 128 (364)
T 2rb7_A 51 HDGIPSVMVLP--EKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKD 128 (364)
T ss_dssp ETTEEEEEECS--BTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CCCceEEEEEc--CCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 78999998641 124568999999999974 4789999999999999999999865445 457
Q ss_pred --EEEEEeCCcCC-CCcchHHHHhhCCCccCceEEEEecc
Q 004085 73 --VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEA 109 (774)
Q Consensus 73 --IiFlf~~aEE~-gl~GS~~fv~~h~~~~~i~a~INLD~ 109 (774)
|+|+|..+||. |+.|++.++++. +..+.+++|.
T Consensus 129 ~~v~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 129 MALGLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp CCEEEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred ccEEEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 99999999996 689999999764 4567777664
No 35
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=98.62 E-value=6.6e-08 Score=105.54 Aligned_cols=95 Identities=24% Similarity=0.415 Sum_probs=75.0
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCC--------------CCCC----CCChhHHHHHHHHHHHHHHcCCCCCc
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------------AEGA----GDCSSCVAVMLELARAMSQWAHGFKN 71 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~--------------spGA----~DngsGvAvmLElaR~L~~~~~~p~~ 71 (774)
..||+++++|+. .+.+.|++.||+|+++. +.|+ .|+..|+|++|++++.|++.+. +++
T Consensus 56 ~~nv~a~~~g~~---~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~ 131 (373)
T 3gb0_A 56 AGNLICTLPATK---DGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHG 131 (373)
T ss_dssp SCCEEEEECCSS---TTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred ceeEEEEecCCC---CCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCC
Confidence 379999998851 24578999999999963 3466 4999999999999999998654 678
Q ss_pred cEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCC
Q 004085 72 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 111 (774)
Q Consensus 72 ~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G 111 (774)
+|.|+|..+||.|..|++.+..+. -+....+++|..+
T Consensus 132 ~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 168 (373)
T 3gb0_A 132 TIEFIITVGEESGLVGAKALDRER---ITAKYGYALDSDG 168 (373)
T ss_dssp CEEEEEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECS
T ss_pred CEEEEEEeccccCchhhhhhCHHh---cCCCEEEEEcCCC
Confidence 999999999999999999886432 1345566666543
No 36
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=98.61 E-value=9.3e-08 Score=108.32 Aligned_cols=88 Identities=18% Similarity=0.137 Sum_probs=74.6
Q ss_pred CCceEEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCC
Q 004085 1 MGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTG 80 (774)
Q Consensus 1 ~g~~~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~a 80 (774)
+|+.....+..||+++++|+ .+++.|++.+|+|+++.. |.-|+..|++++|+++|.|++.+.+++++|+|+|+.+
T Consensus 83 ~G~~v~~d~~gnvia~~~g~----~~~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~d 157 (474)
T 2v8h_A 83 LGCKVKVDKIGNMFAVYPGK----NGGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFN 157 (474)
T ss_dssp TTCEEEEBTTCCEEEEECCS----SCCSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTT
T ss_pred cCCEEEEecCceEEEEECCC----CCCCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECC
Confidence 35555555678999999875 233479999999999853 6789999999999999999998778899999999999
Q ss_pred cCC-----CCcchHHHHh
Q 004085 81 EEE-----GLNGAHSFVT 93 (774)
Q Consensus 81 EE~-----gl~GS~~fv~ 93 (774)
||. |+.||+.+..
T Consensus 158 EE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 158 AEGARFARSCTGSSVWSH 175 (474)
T ss_dssp CSCSSSSCTTHHHHHHTT
T ss_pred ccCCCCCCCcccHHHHHh
Confidence 998 7889999974
No 37
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=98.60 E-value=6.3e-08 Score=107.57 Aligned_cols=89 Identities=17% Similarity=0.118 Sum_probs=74.6
Q ss_pred CCceEEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCC
Q 004085 1 MGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTG 80 (774)
Q Consensus 1 ~g~~~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~a 80 (774)
+|.....++..||+++++|+. ...+.|++.+|+|+++. .|..|+..|++++|++++.|++.+.+++++|+|+|+.+
T Consensus 52 ~G~~v~~~~~gnv~a~~~g~~---~~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~ 127 (423)
T 1z2l_A 52 SGLETRFDEVGNLYGRLNGTE---YPQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAE 127 (423)
T ss_dssp TTCEEEECTTSCEEEEECCSS---EEEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESC
T ss_pred cCCEEEEecCCcEEEEEcCCC---CCCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcC
Confidence 355555566779999998751 12368999999999985 48899999999999999999987778899999999999
Q ss_pred cCC-----CCcchHHHHh
Q 004085 81 EEE-----GLNGAHSFVT 93 (774)
Q Consensus 81 EE~-----gl~GS~~fv~ 93 (774)
||. |+.||+.+..
T Consensus 128 EE~~~~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 128 EEGSRFPYVFWGSKNIFG 145 (423)
T ss_dssp SSCCSSSCSCHHHHHHTT
T ss_pred ccccccCCCcccHHHHHc
Confidence 998 5779999885
No 38
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=98.59 E-value=1.8e-07 Score=102.92 Aligned_cols=103 Identities=19% Similarity=0.230 Sum_probs=78.5
Q ss_pred CceEEE---eccceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------------CCCCCCChhHHHHHHH
Q 004085 2 GRTLIY---SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLE 57 (774)
Q Consensus 2 g~~~~y---~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------------spGA~DngsGvAvmLE 57 (774)
|..... .+..||++++ |+ +.+.|++.+|+|+++. +.|+.|+..|++++|+
T Consensus 40 G~~~~~~~~~~~~nv~a~~-g~-----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~ 113 (393)
T 1vgy_A 40 GFAAEEMHFGNTKNIWLRR-GT-----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVT 113 (393)
T ss_dssp TCEEEECCBTTBCEEEEEE-CS-----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHH
T ss_pred CCcEEEEecCCCcEEEEEE-CC-----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHH
Confidence 554443 3578999999 64 2468999999999874 3688899999999999
Q ss_pred HHHHHHHcCCCCCccEEEEEeCCcCCC-CcchHHHHhhCCC-ccCceEEEEeccC
Q 004085 58 LARAMSQWAHGFKNAVIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAIDLEAM 110 (774)
Q Consensus 58 laR~L~~~~~~p~~~IiFlf~~aEE~g-l~GS~~fv~~h~~-~~~i~a~INLD~~ 110 (774)
+++.+.+.+.+++++|+|+|..+||.+ +.|++.+++.... ..++.+++..|..
T Consensus 114 a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 114 ACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp HHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 999998876678999999999999984 7899988753211 1234556655543
No 39
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=98.52 E-value=2.1e-07 Score=105.91 Aligned_cols=84 Identities=18% Similarity=0.263 Sum_probs=72.2
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCC-------------------CCCCCCChhHHHHHHHHHHHHHHcCCCCC
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA-------------------AEGAGDCSSCVAVMLELARAMSQWAHGFK 70 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~-------------------spGA~DngsGvAvmLElaR~L~~~~~~p~ 70 (774)
..|++++++.. ..++.|++.+|+|+++. ++|+.||..|++++|+++|.|++.+.+++
T Consensus 86 ~~~~~~~~~~g----~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~ 161 (492)
T 3khx_A 86 VDHIAGRIEAG----KGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWK 161 (492)
T ss_dssp ETTTEEEEEEE----CSSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCS
T ss_pred eCCEEEEEEeC----CCCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCC
Confidence 46888877631 13578999999999874 26899999999999999999998877889
Q ss_pred ccEEEEEeCCcCCCCcchHHHHhhCCC
Q 004085 71 NAVIFLFNTGEEEGLNGAHSFVTQHPW 97 (774)
Q Consensus 71 ~~IiFlf~~aEE~gl~GS~~fv~~h~~ 97 (774)
++|+|+|..+||.|..|++.++++++.
T Consensus 162 ~~i~~~~~~~EE~g~~g~~~~~~~~~~ 188 (492)
T 3khx_A 162 KRIHMIIGTDEESDWKCTDRYFKTEEM 188 (492)
T ss_dssp SEEEEEEECCTTCCCCTTSHHHHHSCC
T ss_pred CCEEEEEECCccCCCcCHHHHHHhCcC
Confidence 999999999999999999999988753
No 40
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=98.52 E-value=1.3e-07 Score=106.95 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=79.0
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------------CCCCCCChhHHHHHHHHHHHHHHcCCC
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHG 68 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------------spGA~DngsGvAvmLElaR~L~~~~~~ 68 (774)
..||+++++|+ +.+.|++.+|+|+++. ++|+.|+..|+|++|++++.|++.+..
T Consensus 77 ~~~v~a~~~g~-----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~ 151 (472)
T 3pfe_A 77 TPLLFMEIPGQ-----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLP 151 (472)
T ss_dssp CCEEEEEECCS-----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEEEEcCC-----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCC
Confidence 46999999873 3468999999997652 379999999999999999999987766
Q ss_pred CCccEEEEEeCCcCCCCcchHHHHhhCCC-ccCceEEEEeccC
Q 004085 69 FKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAIDLEAM 110 (774)
Q Consensus 69 p~~~IiFlf~~aEE~gl~GS~~fv~~h~~-~~~i~a~INLD~~ 110 (774)
+. +|+|+|..+||.|..|++.++++++. .+++.+++.+|..
T Consensus 152 ~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~ 193 (472)
T 3pfe_A 152 YP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSG 193 (472)
T ss_dssp CE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCB
T ss_pred CC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCCC
Confidence 66 99999999999999999999977631 2467888888853
No 41
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=98.52 E-value=4.4e-07 Score=102.19 Aligned_cols=89 Identities=16% Similarity=0.135 Sum_probs=72.0
Q ss_pred CceEEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCC--------------------CCCCCCChhHHHHHHHHHHH
Q 004085 2 GRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------------------AEGAGDCSSCVAVMLELARA 61 (774)
Q Consensus 2 g~~~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~--------------------spGA~DngsGvAvmLElaR~ 61 (774)
|......+..++++++ |+ .++.|++.+|+|+++. +.|+.||..|++++|++++.
T Consensus 60 G~~~~~~~~~~~~~~~-g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~ 133 (470)
T 1lfw_A 60 GFDTENFANYAGRVNF-GA-----GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLL 133 (470)
T ss_dssp TCEEEEETTTEEEEEE-CC-----CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHH
T ss_pred CCeEEEecCeEEEEEe-CC-----CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHH
Confidence 4443333334667766 53 2468999999999763 36789999999999999999
Q ss_pred HHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCC
Q 004085 62 MSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHP 96 (774)
Q Consensus 62 L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~ 96 (774)
|++.+.+++++|+|+|..+||.|..|++.+++++.
T Consensus 134 l~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 134 LKEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp HHHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred HHHcCCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 99887788999999999999999999999997754
No 42
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=98.47 E-value=5.1e-07 Score=98.05 Aligned_cols=96 Identities=21% Similarity=0.232 Sum_probs=74.8
Q ss_pred eccceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------------CCCCCCChhHHHHHHHHHHHHHHcC
Q 004085 8 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWA 66 (774)
Q Consensus 8 ~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------------spGA~DngsGvAvmLElaR~L~~~~ 66 (774)
.+..|+++++ |+ +++.|++.||+|+++. +.|+.|+..|++++|++++.+.+.+
T Consensus 46 ~~~~n~~a~~-g~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~ 119 (377)
T 3isz_A 46 NDTLNLWAKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKAN 119 (377)
T ss_dssp TTBCEEEEEE-ES-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEe-CC-----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhC
Confidence 4678999998 53 3568999999999874 2577899999999999999998876
Q ss_pred CCCCccEEEEEeCCcCCCC-cchHHHHhhCCC-ccCceEEEEecc
Q 004085 67 HGFKNAVIFLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAIDLEA 109 (774)
Q Consensus 67 ~~p~~~IiFlf~~aEE~gl-~GS~~fv~~h~~-~~~i~a~INLD~ 109 (774)
.+++++|+|+|..+||.+. .||+.+++.... ..++.+++..|.
T Consensus 120 ~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~ 164 (377)
T 3isz_A 120 PNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEP 164 (377)
T ss_dssp TTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCC
T ss_pred CCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCC
Confidence 7788999999999999976 699988753211 123455565553
No 43
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=98.46 E-value=2.9e-07 Score=101.52 Aligned_cols=96 Identities=24% Similarity=0.397 Sum_probs=73.1
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCC---------------CCCC----CCChhHHHHHHHHHHHHHHcCCCCC
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------AEGA----GDCSSCVAVMLELARAMSQWAHGFK 70 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~---------------spGA----~DngsGvAvmLElaR~L~~~~~~p~ 70 (774)
..||+++++|+. +..+.+.|++.||+|+++. +.|+ .||..|+|++|++++.|++.+. ++
T Consensus 74 ~~nvia~~~g~~-~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~ 151 (396)
T 3rza_A 74 ANNLVCTMNSTI-EEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PH 151 (396)
T ss_dssp SCCEEEEECCCC-C---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CC
T ss_pred CceEEEEECCcC-CCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CC
Confidence 579999998741 0124578999999999952 4566 4999999999999999988653 67
Q ss_pred ccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccC
Q 004085 71 NAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 110 (774)
Q Consensus 71 ~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~ 110 (774)
.+|.|+|..+||.|..|++.+..+.. +....+.+|..
T Consensus 152 ~~v~~~~~~~EE~g~~Ga~~~~~~~~---~~~~~~~~~~~ 188 (396)
T 3rza_A 152 GQIQFVITVGEESGLIGAKELNSELL---DADFGYAIDAS 188 (396)
T ss_dssp CCEEEEEESCGGGTSHHHHHCCGGGC---CCSEEEEEEES
T ss_pred CCEEEEEEcccccccHhHhhhchhhc---ccceEEEEecC
Confidence 89999999999999999998864321 23455566644
No 44
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=98.45 E-value=1.5e-07 Score=101.47 Aligned_cols=147 Identities=14% Similarity=0.026 Sum_probs=97.6
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHh--hCCCccCceEEEEeccCCCCC-------C
Q 004085 45 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVT--QHPWSTTIRVAIDLEAMGIGG-------K 115 (774)
Q Consensus 45 A~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~--~h~~~~~i~a~INLD~~G~gg-------~ 115 (774)
+.||.+|++++||+++.++ + +.++|++.||.|+.|++.... .. .-+..++|++|....+. .
T Consensus 163 ~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~--~~~~~~~i~~D~~~~~~~~~~~~G~ 232 (321)
T 3cpx_A 163 YLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYE--TFHVKQSLICDITWVTEGVEAGKGV 232 (321)
T ss_dssp THHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHH--HHCCCEEEECCCEECCSSSCTTSCE
T ss_pred CCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhcccc--ccCCCEEEEEeCccccCCcccCCCc
Confidence 6899999999999998764 2 899999999999999986321 00 12335788888875432 2
Q ss_pred ccee--ecCCChHHHHHHHHHhcCCCCcccchhccccCCCCCCCchHHHhh-cCCCeEEEEeeeCCCCCCCCcCCCcCCC
Q 004085 116 SGLF--QAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLL 192 (774)
Q Consensus 116 ~~lf--q~g~~~~li~~~~~~a~~P~~~~~~~d~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i 192 (774)
.+-. ...+++.+.+..++.++. .+... + .+. ..+.+||-..+.. ..|+|.+++..- ....||+. |.+
T Consensus 233 ~i~~~~~~~~~~~l~~~~~~~a~~-~gi~~-q-~~~--~~~GGsD~~~~~~s~~Gipt~~lG~~--~~~~Hs~~---E~~ 302 (321)
T 3cpx_A 233 AISMRDRMIPRKKYVNRIIELARQ-TDIPF-Q-LEV--EGAGASDGRELQLSPYPWDWCFIGAP--EKDAHTPN---ECV 302 (321)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHTT-SSCCE-E-EEE--CSSCCCHHHHHHHSSSCCBCCBEECE--EBSTTSTT---CEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHHH-cCCCE-E-EEe--CCCCCccHHHHHHhCCCCCEEEEchh--hcccchhh---hhe
Confidence 2111 111256677766665432 12111 1 110 1356899888842 379999977543 34579976 788
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 004085 193 KPGSLQHLGENMLAFLLQA 211 (774)
Q Consensus 193 d~~slq~~g~~vl~~v~~l 211 (774)
+.+.++...+.+.+++++|
T Consensus 303 ~~~dl~~~~~ll~~~~~~l 321 (321)
T 3cpx_A 303 HKKDIESMVGLYKYLMEKL 321 (321)
T ss_dssp EHHHHHHHHHHHHHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhC
Confidence 8999999999998887653
No 45
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=98.44 E-value=1.7e-07 Score=104.00 Aligned_cols=102 Identities=21% Similarity=0.228 Sum_probs=77.4
Q ss_pred Cce-EEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC------C-------------------------------
Q 004085 2 GRT-LIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------E------------------------------- 43 (774)
Q Consensus 2 g~~-~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s------p------------------------------- 43 (774)
|.. ....+..||+++++|+. ..+.+.|++.+|+|+++.. |
T Consensus 46 G~~~~~~~~~~nvia~~~g~~--~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~ 123 (417)
T 1fno_A 46 GLVNITLSEKGTLMATLPANV--EGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQL 123 (417)
T ss_dssp TCEEEEECTTCCEEEEECCSS--CSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGC
T ss_pred CCCeEEECCCceEEEEECCCC--CCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhh
Confidence 444 45556789999998751 1135689999999999642 1
Q ss_pred ---------CC----CCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccC
Q 004085 44 ---------GA----GDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 110 (774)
Q Consensus 44 ---------GA----~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~ 110 (774)
|+ .||..|+|++|++++.|++.+ .++++|+|+|..+||.| .|++.++++. . +..+.+++|..
T Consensus 124 ~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 124 LGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp TTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred cCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 32 788899999999999999876 67899999999999999 8998776321 1 34567777754
No 46
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=98.41 E-value=1.2e-06 Score=95.81 Aligned_cols=149 Identities=20% Similarity=0.171 Sum_probs=103.2
Q ss_pred CCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCCC---------
Q 004085 44 GAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG--------- 114 (774)
Q Consensus 44 GA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~gg--------- 114 (774)
.|-||-+||+++||++|.+++. .+++++.++|+..||.|+.||+....... . ..+|.+|+.-++.
T Consensus 179 ~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~~~--p--d~~i~~D~~~a~d~p~~~~~lg 252 (355)
T 3kl9_A 179 KAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTKFD--P--EVFLAVDCSPAGDVYGGQGKIG 252 (355)
T ss_dssp SCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHHHC--C--SEEEEEEEEECCGGGTSSCCTT
T ss_pred eccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhccC--C--CEEEEecCccCCCCCCcccccC
Confidence 4778999999999999999753 57899999999999999999987764321 2 2367778753322
Q ss_pred --Ccceeec-CC--ChHHHHHHHHHh---cCCCCcccchhccccCCCCCCCchHHHhh-cCCCeEEEEeeeCCCCCCCCc
Q 004085 115 --KSGLFQA-GP--HPWAVENFAAAA---KYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTK 185 (774)
Q Consensus 115 --~~~lfq~-g~--~~~li~~~~~~a---~~P~~~~~~~d~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~ 185 (774)
+.+-... +. ++.+.+...+.+ ..|+.. ... ..+||-..+.. ..|+|..++..- ....||+
T Consensus 253 ~G~~i~~~d~~~~~~~~l~~~l~~~a~~~gIp~q~-----~~~----ggGtDa~~i~~a~~Gipt~~igvp--~~~~Hs~ 321 (355)
T 3kl9_A 253 DGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQY-----YCG----KGGTDAGAAHLKNGGVPSTTIGVC--ARYIHSH 321 (355)
T ss_dssp SCEEEEEEETTEECCHHHHHHHHHHHHHTTCCEEE-----EEC----SSCCTHHHHTTSTTCCCEEEEEEE--EBSCSSS
T ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHcCCCEEE-----ECC----CcchHHHHHHHhCCCCCEEEEccC--cCCCCCc
Confidence 2222211 21 566666665543 234322 111 15799888764 268999987542 2348987
Q ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 004085 186 NDKLDLLKPGSLQHLGENMLAFLLQAA 212 (774)
Q Consensus 186 ~Dt~d~id~~slq~~g~~vl~~v~~la 212 (774)
. |.++.+.+++..+.+.++++++.
T Consensus 322 ~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 322 Q---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp C---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred c---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 6 78889999999999999887764
No 47
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=98.40 E-value=8.4e-07 Score=96.87 Aligned_cols=83 Identities=20% Similarity=0.250 Sum_probs=69.9
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCC-------------------CCCCCCChhHHHHHHHHHHHHHHcCCCCC
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA-------------------AEGAGDCSSCVAVMLELARAMSQWAHGFK 70 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~-------------------spGA~DngsGvAvmLElaR~L~~~~~~p~ 70 (774)
..|+++ ++|+ +.|++.+|+|+++. ++|+.||..|+|.+|+++|. ++
T Consensus 58 ~~~~~a-~~g~-------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~ 122 (369)
T 2f7v_A 58 AVSLYA-VRGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GD 122 (369)
T ss_dssp CEEEEE-EESC-------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CC
T ss_pred ceEEEE-EcCC-------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CC
Confidence 379999 8762 46999999999863 36899999999999999986 67
Q ss_pred ccEEEEEeCCcCC-CCcchHHHHhhCCCccCceEEEEeccC
Q 004085 71 NAVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEAM 110 (774)
Q Consensus 71 ~~IiFlf~~aEE~-gl~GS~~fv~~h~~~~~i~a~INLD~~ 110 (774)
++|+|+|..+||. |+.|++.++++.. +..+++++|..
T Consensus 123 ~~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 123 GDAAFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp CCEEEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred CCEEEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 8999999999999 8999999997654 46677888764
No 48
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=98.39 E-value=1.1e-06 Score=97.58 Aligned_cols=99 Identities=19% Similarity=0.387 Sum_probs=74.6
Q ss_pred CceEEEe-ccceEEEEEcCCCCCCCCCCeEEEeecccCcCCCC-----------C----CCCChhHHHHHHHHHHHHHHc
Q 004085 2 GRTLIYS-DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAE-----------G----AGDCSSCVAVMLELARAMSQW 65 (774)
Q Consensus 2 g~~~~y~-~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~sp-----------G----A~DngsGvAvmLElaR~L~~~ 65 (774)
|...... ...|++++++|+ .+ +.|++.+|+|+++... | .+.| .|+|++|++++.|++.
T Consensus 62 G~~v~~~~~~~~l~a~~~~~----~~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d-~~~a~~l~a~~~l~~~ 135 (418)
T 1xmb_A 62 GIKYRYPVAITGVIGYIGTG----EP-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHD-GHVTMLLGAAKILHEH 135 (418)
T ss_dssp TCCEEEEETTTEEEEEEESS----SS-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHH-HHHHHHHHHHHHHHHT
T ss_pred CCeeEeccCCcEEEEEEcCC----CC-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCch-HHHHHHHHHHHHHHhc
Confidence 4443333 368999999874 23 7899999999998431 1 1112 7999999999999987
Q ss_pred CCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEec
Q 004085 66 AHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLE 108 (774)
Q Consensus 66 ~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD 108 (774)
+.+++++|+|+|..+|| |..|++.++++.. .+++.++++++
T Consensus 136 ~~~~~~~v~~~~~~~EE-g~~G~~~~~~~g~-~~~~d~~i~~~ 176 (418)
T 1xmb_A 136 RHHLQGTVVLIFQPAEE-GLSGAKKMREEGA-LKNVEAIFGIH 176 (418)
T ss_dssp GGGCSSEEEEEEECCTT-TTCHHHHHHHTTT-TTTEEEEEEEE
T ss_pred cccCCceEEEEEecccc-ccccHHHHHHcCC-cCCCCEEEEEe
Confidence 76788999999999999 9999999996543 23456666653
No 49
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=98.39 E-value=6.3e-07 Score=102.04 Aligned_cols=102 Identities=15% Similarity=0.215 Sum_probs=78.1
Q ss_pred CCceEEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC------------------------CCCC---CChhHHH
Q 004085 1 MGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------------EGAG---DCSSCVA 53 (774)
Q Consensus 1 ~g~~~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s------------------------pGA~---DngsGvA 53 (774)
+|.....+...||+++++|+. +..+.+.|++.+|+|+++.. +|+. ||+.|+|
T Consensus 47 ~G~~v~~~~~~nv~a~~~g~~-g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a 125 (490)
T 3mru_A 47 QGFDVRRDPTGNVFIKKPATP-GMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMA 125 (490)
T ss_dssp TTCEEEECTTCCEEEEECCCT-TCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHH
T ss_pred cCCEEEEcCCCeEEEEEcCCC-CCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHH
Confidence 355555566789999998751 11356789999999998742 4776 9999999
Q ss_pred HHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccC
Q 004085 54 VMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 110 (774)
Q Consensus 54 vmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~ 110 (774)
.+|++++ + ...++.+|.|+|..+||.|+.|++.++++. -+....+|+|..
T Consensus 126 ~~l~~l~---~-~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 126 SCLAVLA---S-KEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp HHHHHHH---C-SSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred HHHHHHH---h-CCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 9999763 2 345678999999999999999999988532 246778899854
No 50
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=98.32 E-value=2.4e-06 Score=94.52 Aligned_cols=91 Identities=19% Similarity=0.267 Sum_probs=70.3
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccCcCCCC-----------CC---CCChhHHHHHHHHHHHHHHcCCCCCccEEEE
Q 004085 11 NHIVLRIQPKYASEAAENAILVSSHIDTVFAAE-----------GA---GDCSSCVAVMLELARAMSQWAHGFKNAVIFL 76 (774)
Q Consensus 11 ~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~sp-----------GA---~DngsGvAvmLElaR~L~~~~~~p~~~IiFl 76 (774)
.||+++++|+ .+++.|++.+|+|+++... |. .+.-.|+|++|++++.|++.+.+++++|+|+
T Consensus 77 ~nv~a~~~g~----~~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~ 152 (404)
T 1ysj_A 77 TGVIAEIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFI 152 (404)
T ss_dssp SCEEEEEECS----SCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEE
T ss_pred ceEEEEEeCC----CCCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEE
Confidence 4999999875 2457899999999998431 21 1123799999999999998666788999999
Q ss_pred EeCCcCCCCcchHHHHhhCCCccCceEEEEe
Q 004085 77 FNTGEEEGLNGAHSFVTQHPWSTTIRVAIDL 107 (774)
Q Consensus 77 f~~aEE~gl~GS~~fv~~h~~~~~i~a~INL 107 (774)
|..+||. ..|++.++++. ..+++.+++.+
T Consensus 153 ~~~~EE~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 153 FQPAEEI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp EESCTTT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred Eeccccc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 9999998 78999999653 33445566665
No 51
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=98.25 E-value=1.7e-06 Score=98.20 Aligned_cols=102 Identities=17% Similarity=0.235 Sum_probs=76.8
Q ss_pred CCceEEEeccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC------------------------CCCC---CChhHHH
Q 004085 1 MGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------------EGAG---DCSSCVA 53 (774)
Q Consensus 1 ~g~~~~y~~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s------------------------pGA~---DngsGvA 53 (774)
+|.........|++++++|+. +..+.+.|++.+|+|+++.. .|+. |+..|+|
T Consensus 44 ~G~~~~~~~~~nv~a~~~g~~-g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a 122 (487)
T 2qyv_A 44 KGFFAERDEVGNVLIRKPATV-GMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMA 122 (487)
T ss_dssp TTCEEEECTTCCEEEEECCCT-TCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHH
T ss_pred cCCEEEEcCCCcEEEEeCCCC-CCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHH
Confidence 355555566789999998741 00234679999999998753 2776 9999999
Q ss_pred HHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccC
Q 004085 54 VMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 110 (774)
Q Consensus 54 vmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~ 110 (774)
.+|+++|. .+ .++++|+|+|..+||.|..|++.++++. . +..+++++|..
T Consensus 123 ~~l~a~~~---~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~ 172 (487)
T 2qyv_A 123 SALAVLES---ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTE 172 (487)
T ss_dssp HHHHHHHC---SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCC
T ss_pred HHHHHHHh---CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccC
Confidence 99999973 23 4678999999999999999999988532 2 25667777765
No 52
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.16 E-value=1.5e-05 Score=87.30 Aligned_cols=150 Identities=17% Similarity=0.121 Sum_probs=99.8
Q ss_pred CCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCCCCc-------
Q 004085 44 GAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKS------- 116 (774)
Q Consensus 44 GA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~gg~~------- 116 (774)
.+-||-.||+++||++|.+++ ++.++.++|++-||.|+.|++.-...- ..+ .+|.+|+.-++.+.
T Consensus 182 ~~lDnr~g~~~~l~~l~~l~~----~~~~v~~~ft~qEEVG~~ga~~aa~~i--~pd--~~i~~Dv~~a~dp~~~~~~~~ 253 (354)
T 2vpu_A 182 PYLDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGLRGARVASYAI--NPE--VGIAMDVTFAKQPHDKGKIVP 253 (354)
T ss_dssp TTHHHHHHHHHHHHHHHHCCC----CSSEEEEEECSCCTTTSHHHHHHHHHH--CCS--EEEEEEEEECCCTTSTTCCCC
T ss_pred ecCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccCccchhhhhccc--CCC--EEEEecccccCCCCcccccCc
Confidence 588999999999999998753 679999999999999999988654321 122 35666653221111
Q ss_pred ------ceeecCC-ChHHHHHHHHHh---cCCCCcccchhccccCCCCCCCchHHHhh-cCCCeEEEEeeeCCCCCCCCc
Q 004085 117 ------GLFQAGP-HPWAVENFAAAA---KYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTK 185 (774)
Q Consensus 117 ------~lfq~g~-~~~li~~~~~~a---~~P~~~~~~~d~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~ 185 (774)
.+-++.+ ++.+.+...+.+ ..|+... ... -+.+||-..+.. ..|+|..++..- ....||+
T Consensus 254 ~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~gIp~q~~----~~~---g~gGtDa~~i~~a~~Gipt~~Igvp--~~~~Hs~ 324 (354)
T 2vpu_A 254 ELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVE----PSP---RPTGTDANVMQINKEGVATAVLSIP--IRYMHSQ 324 (354)
T ss_dssp CTTSCCEEEESTTSCHHHHHHHHHHHHHTTCCCEEE----ECC---SCCSSTHHHHHTSTTCCEEEEEEEE--EBSTTST
T ss_pred eECCcceEcCCCCCCHHHHHHHHHHHHHcCCCcEEE----eCC---CCCccHHHHHHHhcCCCCEEEECcc--cccCcCc
Confidence 1112222 566666655543 3344221 111 124799888753 368999997542 2348987
Q ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 186 NDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 186 ~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
. |.++.+.+++..+.+.++++.+..
T Consensus 325 ~---E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 325 V---ELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp T---CEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred c---eEeeHHHHHHHHHHHHHHHHhccH
Confidence 6 788899999999999999988754
No 53
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.10 E-value=4.7e-06 Score=92.04 Aligned_cols=95 Identities=17% Similarity=0.105 Sum_probs=71.1
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccCcCC-CCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCC-Ccc
Q 004085 10 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA-AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEG-LNG 87 (774)
Q Consensus 10 ~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~-spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~g-l~G 87 (774)
.+||+++++|. .+++.|++.+|+|+++. ..|-+.|+- .+++|.+++.|++.+..++.+|.|+|..+||.| ..|
T Consensus 61 ~~~via~~~g~----~~g~~i~l~ah~D~vpg~~ha~G~d~~-~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~G 135 (394)
T 3ram_A 61 ATGFIATYDSG----LDGPAIGFLAEYDALPGLGHACGHNII-GTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGS 135 (394)
T ss_dssp EEEEEEEEECS----SSSCEEEEEECCCCCTTTSSTTCHHHH-HHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCC
T ss_pred ceEEEEEEeCC----CCCCEEEEEEecccCCCcceECCccHH-HHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCc
Confidence 36999999875 34579999999999973 122333443 467899999998755567899999999999998 589
Q ss_pred hH-HHHhhCCCccCceEEEEeccC
Q 004085 88 AH-SFVTQHPWSTTIRVAIDLEAM 110 (774)
Q Consensus 88 S~-~fv~~h~~~~~i~a~INLD~~ 110 (774)
|+ .++++ ...+++.+++.+|..
T Consensus 136 a~~~~~~~-g~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 136 AKASYVKA-GVIDQIDIALMIHPG 158 (394)
T ss_dssp HHHHHHHH-TGGGGCSEEECCEEE
T ss_pred hHHHHHHc-CCcccCCEEEEECCc
Confidence 99 77754 333457777777653
No 54
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.05 E-value=1.7e-05 Score=88.91 Aligned_cols=94 Identities=17% Similarity=0.278 Sum_probs=71.2
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccCcCCC------------------CCCCC---ChhHHHHHHHHHHHHHHcCC
Q 004085 9 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------EGAGD---CSSCVAVMLELARAMSQWAH 67 (774)
Q Consensus 9 ~~~NVI~~i~g~~~~~~~~~~ILl~AHyDS~~~s------------------pGA~D---ngsGvAvmLElaR~L~~~~~ 67 (774)
..+||+++++|. .+.+.|++.||+|+++.. +|..+ .-.++|++|++++.|++.+.
T Consensus 95 ~~~~vva~~~~~----~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa~~L~~~~~ 170 (445)
T 3io1_A 95 GFAGVVATLDTG----RPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYAA 170 (445)
T ss_dssp TCCCEEEEEECS----SCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHHHHHHHTGG
T ss_pred CCCEEEEEEeCC----CCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHHHHHHhCcC
Confidence 358999999875 345799999999999842 12111 01369999999999998767
Q ss_pred CCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEec
Q 004085 68 GFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLE 108 (774)
Q Consensus 68 ~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD 108 (774)
+++.+|+|+|..+|| +..|++.++++. ..+++.+++.++
T Consensus 171 ~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h 209 (445)
T 3io1_A 171 QLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIH 209 (445)
T ss_dssp GCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEE
T ss_pred cCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEe
Confidence 789999999999999 668999999653 345677777665
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=97.68 E-value=0.00029 Score=76.63 Aligned_cols=143 Identities=16% Similarity=0.216 Sum_probs=91.7
Q ss_pred CCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhCCCccCceEEEEeccCCCCC---------
Q 004085 44 GAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG--------- 114 (774)
Q Consensus 44 GA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h~~~~~i~a~INLD~~G~gg--------- 114 (774)
.+-||-.||+++||++|.++. ++++.++|+.-||.|+.|++.-...- ..+ .+|.+|+.-++.
T Consensus 177 ~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qEEVG~~Ga~~aa~~i--~pd--~~i~vDv~~a~d~p~~~~~~~ 247 (343)
T 3isx_A 177 KAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQEEVGLVGASVAGYGV--PAD--EAIAIDVTDSADTPKAIKRHA 247 (343)
T ss_dssp SCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCCCTTSCCSTTTGGGC--CCS--EEEEEEEEECCCSTTCCCTTC
T ss_pred ccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCcccCchhHHHHhhcC--CCC--EEEEEeCcCCCCCCCcccccc
Confidence 588999999999999998742 68999999999999999998655322 222 356666532211
Q ss_pred ------Ccceeec-CC--ChHHHHHHHHHh---cCCCCcccchhccccCCCCCCCchHHHhh-cCCCeEEEEeeeCCCCC
Q 004085 115 ------KSGLFQA-GP--HPWAVENFAAAA---KYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAV 181 (774)
Q Consensus 115 ------~~~lfq~-g~--~~~li~~~~~~a---~~P~~~~~~~d~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~ 181 (774)
+.+-... +. ++.+.+...+.+ ..|+-. +... ..+||-..+.. ..|+|..++..- ..+
T Consensus 248 ~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~~gIp~Q~----~v~~----ggGTDa~~i~~a~~Gipt~~Igvp--~r~ 317 (343)
T 3isx_A 248 MRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQM----EVLT----FGGTNAMGYQRTREGIPSATVSIP--TRY 317 (343)
T ss_dssp CCTTSCCEEECBTTCCHHHHHHHHHHHHHHHHTTCCCEE----CCCB----CCCSSHHHHHHHTSSCCEEEEEEE--EBS
T ss_pred cccCCCcEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEE----ecCC----CCchHHHHHHHhcCCCCEEEEccc--ccc
Confidence 1111111 11 345555554433 334422 1111 25799877643 368999988642 234
Q ss_pred CCCcCCCcCCCCHHHHHHHHHHHHHHH
Q 004085 182 YHTKNDKLDLLKPGSLQHLGENMLAFL 208 (774)
Q Consensus 182 YHT~~Dt~d~id~~slq~~g~~vl~~v 208 (774)
.||+. |.++.+.++++.+.+.+++
T Consensus 318 ~Hs~~---E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 318 VHSPS---EMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp TTSTT---EEECHHHHHHHHHHHHHHH
T ss_pred ccchh---hEecHHHHHHHHHHHHHHH
Confidence 88876 7788888888888887765
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=96.77 E-value=0.015 Score=60.16 Aligned_cols=56 Identities=14% Similarity=0.131 Sum_probs=44.6
Q ss_pred CCCCchHHHhh-cCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 004085 154 TSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASS 214 (774)
Q Consensus 154 ps~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~~ 214 (774)
+.+||-..|.. ..|+|.+.+..- . ...||+. |.++.+.+++..+.+.+++++|...
T Consensus 294 ~ggTDa~~~~~~~~Giptv~~G~g-~-~~~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~ 350 (354)
T 2wzn_A 294 PTGTDANVMQINKEGVATAVLSIP-I-RYMHSQV---ELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp CCSSHHHHHHTSTTCCEEEEEEEE-E-BSTTSTT---CEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccccHHHHHHHhcCCCCEEEECcc-c-CCCCccc---EEEEHHHHHHHHHHHHHHHHhCccc
Confidence 46799887743 269999998753 2 3469987 8899999999999999999998654
No 57
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=92.86 E-value=0.18 Score=56.56 Aligned_cols=152 Identities=12% Similarity=0.020 Sum_probs=87.7
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhh-------------CC--C------ccCc
Q 004085 43 EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQ-------------HP--W------STTI 101 (774)
Q Consensus 43 pGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~-------------h~--~------~~~i 101 (774)
-++-||-.||.++||+++.+ .++.++++++++-||.|+.|++.-... .+ - .-.-
T Consensus 245 ~~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~~~l~~ 319 (450)
T 2glf_A 245 AYGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLDEVLEN 319 (450)
T ss_dssp ETTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHHHHHHS
T ss_pred EecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHHHhhcC
Confidence 46889999999999998875 357899999999999998877632110 00 0 0011
Q ss_pred eEEEEeccCCCC------------------CCcceeecC---------CChHHHHHHH---HHhcCCCCcccchhccccC
Q 004085 102 RVAIDLEAMGIG------------------GKSGLFQAG---------PHPWAVENFA---AAAKYPSGQVTAQDLFASG 151 (774)
Q Consensus 102 ~a~INLD~~G~g------------------g~~~lfq~g---------~~~~li~~~~---~~a~~P~~~~~~~d~f~~g 151 (774)
..+|..|++-+. |+.+-..++ +++.+...++ +.+.-|+-. |..|
T Consensus 320 s~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~Q~------~~~g 393 (450)
T 2glf_A 320 TSVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIWQV------ATLG 393 (450)
T ss_dssp CEEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCEEE------CCSS
T ss_pred CeEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCEEE------EEec
Confidence 334555543221 221111112 2444444333 333344322 1111
Q ss_pred C--CCCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 004085 152 A--ITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 210 (774)
Q Consensus 152 ~--ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~ 210 (774)
. .+.+||-.++....|+|.+|+..- --+-||+.-+ ++...+.++.+.+.+++..
T Consensus 394 r~d~~gGstig~i~a~~Gi~tvdiGiP--~l~MHS~~E~---~~~~D~~~~~~l~~af~~~ 449 (450)
T 2glf_A 394 KVDQGGGGTIAKFFAERGSDVIDMGPA--LLGMHSPFEI---SSKADLFETYVAYRSLMEK 449 (450)
T ss_dssp STTSCCCCCTHHHHHTTTSCEEEEECE--EBSTTSSSEE---EEHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCcHHHHHhCCCCcEEEechh--hcccchHHHH---hhHHHHHHHHHHHHHHHHh
Confidence 1 345677766655589999998642 2356998844 4555566777777666654
No 58
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=92.27 E-value=0.25 Score=55.15 Aligned_cols=153 Identities=14% Similarity=0.073 Sum_probs=89.8
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHHHhhC-CC-ccCc-------------eEEEE
Q 004085 42 AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-STTI-------------RVAID 106 (774)
Q Consensus 42 spGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~fv~~h-~~-~~~i-------------~a~IN 106 (774)
+-.+-||-+||+++||+++.++ +.+.++.++| +-||.|..|++.-.... |. .+++ ..+|.
T Consensus 230 ~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is 304 (428)
T 2ijz_A 230 AGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVS 304 (428)
T ss_dssp SCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEE
T ss_pred EeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEE
Confidence 4578899999999999998764 3567888888 99999999998754221 21 1111 56788
Q ss_pred eccCCCC------------------CCcceee---cC-CChHHHHHH---HHHhcCCCCcccchhccccCCCCCCCchHH
Q 004085 107 LEAMGIG------------------GKSGLFQ---AG-PHPWAVENF---AAAAKYPSGQVTAQDLFASGAITSATDFQV 161 (774)
Q Consensus 107 LD~~G~g------------------g~~~lfq---~g-~~~~li~~~---~~~a~~P~~~~~~~d~f~~g~ips~TD~~~ 161 (774)
.|++-+. |..+-.. .. +++.+...+ ++...-|+-.. ..+. -.+.+||-.+
T Consensus 305 ~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~~----~~~~-d~~gGsd~g~ 379 (428)
T 2ijz_A 305 ADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSF----VTRS-DMGCGSTIGP 379 (428)
T ss_dssp ECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCBC----CCCS-SCCCCCCCST
T ss_pred EecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEEE----EEeC-CCCccchHHH
Confidence 8875442 1111111 11 244333322 23334454321 1110 1345788777
Q ss_pred Hhh-cCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 004085 162 YKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLL 209 (774)
Q Consensus 162 F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~ 209 (774)
+.. ..|+|.+|+.. +-..-||+.-+. +...++++.+.+.+++.
T Consensus 380 i~~~~~Gi~tvdiGi--p~~~mHS~~E~~---~~~D~~~~~~ll~af~~ 423 (428)
T 2ijz_A 380 ITASQVGVRTVDIGL--PTFAMHSIRELA---GSHDLAHLVKVLGAFYA 423 (428)
T ss_dssp TTGGGGSCCEEEECC--CCCSCSSSSCCC---CSSHHHHHHTTHHHHTT
T ss_pred HHHhCCCCCEEEEch--hhcccchHHHHh---hHHHHHHHHHHHHHHHh
Confidence 643 47999999864 334679987544 44445565555555543
No 59
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=84.35 E-value=1.6 Score=49.55 Aligned_cols=160 Identities=11% Similarity=0.002 Sum_probs=87.4
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcC----CCCCccEEEEEeCCcCCCCcchHHHH----hh----------CCC----ccC
Q 004085 43 EGAGDCSSCVAVMLELARAMSQWA----HGFKNAVIFLFNTGEEEGLNGAHSFV----TQ----------HPW----STT 100 (774)
Q Consensus 43 pGA~DngsGvAvmLElaR~L~~~~----~~p~~~IiFlf~~aEE~gl~GS~~fv----~~----------h~~----~~~ 100 (774)
-++-||-.||.++||+++.+++.. ..+...+ +++++-||.|+.|++.-. .. ... +-.
T Consensus 281 s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v-~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~ 359 (496)
T 3vat_A 281 APRLDNLHSCFCALQALIDSCSAPASLAADPHVRM-IALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIP 359 (496)
T ss_dssp ETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEE-EEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGG
T ss_pred eeccccHHHHHHHHHHHHhhhccccccccCCCcEE-EEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhh
Confidence 478899999999999999875310 0133444 999999999987776521 11 000 001
Q ss_pred ceEEEEeccCCCC------------------CCcceeec----CCChHHHHHHH---HHhcCCCCcccchhccccCCCC-
Q 004085 101 IRVAIDLEAMGIG------------------GKSGLFQA----GPHPWAVENFA---AAAKYPSGQVTAQDLFASGAIT- 154 (774)
Q Consensus 101 i~a~INLD~~G~g------------------g~~~lfq~----g~~~~li~~~~---~~a~~P~~~~~~~d~f~~g~ip- 154 (774)
-..+|..|++-+. |+.+-+.. .+++.+...++ +...-|+-..+. +. -.+
T Consensus 360 ~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~----r~-D~~g 434 (496)
T 3vat_A 360 KSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLMV----RN-DSPC 434 (496)
T ss_dssp GCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEECC----CT-TSCC
T ss_pred cCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEEe----cC-CCCC
Confidence 2356777764221 22211111 12444443333 333455532110 10 123
Q ss_pred CCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 155 SATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 155 s~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
++|+-.+.....|||.+|+.. +-.+-||+.-+.. ...++++.+.+.++++++..
T Consensus 435 GgTig~i~~s~~Gi~tvdIGi--P~ryMHS~~E~~~---~~D~~~~v~Ll~af~~~~~~ 488 (496)
T 3vat_A 435 GTTIGPILASRLGLRVLDLGS--PQLAMHSIRETAC---TTGVLQTITLFKGFFELFPS 488 (496)
T ss_dssp CCCHHHHHHHHHTCEEEEEEC--EEESTTSSSEEEE---SHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHhcccCCcEEEecH--hhhccccHHHHhh---HHHHHHHHHHHHHHHHhHHH
Confidence 345544333237999999864 2235699885544 45566777777777776654
No 60
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=72.80 E-value=1.1 Score=50.34 Aligned_cols=44 Identities=25% Similarity=0.231 Sum_probs=37.8
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHH
Q 004085 43 EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHS 90 (774)
Q Consensus 43 pGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~ 90 (774)
-++-||-+||.++||+++.++ .+++++++++++-||.|..|++.
T Consensus 257 s~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~g 300 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATG 300 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTT
T ss_pred EecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCccccc
Confidence 467899999999999988653 46789999999999999988764
No 61
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=72.65 E-value=6.5 Score=33.22 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=48.1
Q ss_pred CCCCCchHHHhhcCCCeEEEEeeeCCC-CCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 004085 153 ITSATDFQVYKEVAGLSGLDFAYTDKS-AVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASST 215 (774)
Q Consensus 153 ips~TD~~~F~~~~GIPgld~a~~~~~-~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~~~ 215 (774)
.+..||-+.|.. .|+|.+.+.-.... ..-|+.. |+++.+.+.+..+....+++++++.+
T Consensus 23 ~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~d---E~v~i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 23 MPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHD---ERLHEAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp CCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTT---CEEEHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eceeCcHHHHHH-cCCCEEEECCCCCCcccccCCC---CeeEHHHHHHHHHHHHHHHHHHHcCC
Confidence 457899999998 79999987654321 3568876 88899999999999999999999863
No 62
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=68.85 E-value=0.79 Score=51.56 Aligned_cols=46 Identities=22% Similarity=0.241 Sum_probs=32.7
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcCCCCCccEEEEEeCCcCCCCcchHHH
Q 004085 43 EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSF 91 (774)
Q Consensus 43 pGA~DngsGvAvmLElaR~L~~~~~~p~~~IiFlf~~aEE~gl~GS~~f 91 (774)
-++-||-+||+++||+++.+++ .+++++++++++-||.|..|++.-
T Consensus 251 s~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga 296 (458)
T 1y7e_A 251 AYGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGL 296 (458)
T ss_dssp ESSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------
T ss_pred EecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhh
Confidence 3678999999999999887542 467899999999999999888753
No 63
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=39.33 E-value=28 Score=23.53 Aligned_cols=18 Identities=17% Similarity=0.368 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 004085 479 VILAVFIAVVLCLTLVYL 496 (774)
Q Consensus 479 ~~Ia~~~a~~~~l~~~~l 496 (774)
-+||.++|+.+++.++|-
T Consensus 7 eviaglvalltflafgfw 24 (32)
T 2lx0_A 7 EVIAGLVALLTFLAFGFW 24 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 589999999999999974
No 64
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=31.69 E-value=73 Score=25.05 Aligned_cols=34 Identities=21% Similarity=0.474 Sum_probs=14.7
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhCCc
Q 004085 471 GTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAK 506 (774)
Q Consensus 471 ~~pd~~~d~~Ia~~~a~~~~l~~~~l~P~i~~~~~~ 506 (774)
..|-|+ +++|++.++....++.+++=-+.-|+|+
T Consensus 6 ~vp~Wi--Ii~svl~GLLLL~Lii~~LwK~GFFKR~ 39 (54)
T 2l8s_A 6 RVPLWV--ILLSAFAGLLLLMLLILALWKIGFFKRP 39 (54)
T ss_dssp CCCTHH--HHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred cCchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 477774 4444443333333333333333445443
No 65
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=27.41 E-value=36 Score=36.88 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=44.5
Q ss_pred CCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 004085 154 TSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASS 214 (774)
Q Consensus 154 ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~~ 214 (774)
...+|...|.+..|+|++.+.. .....|++. |+++.+.+....+.+..++.+++..
T Consensus 375 ~g~~D~~~~~~~~giP~v~~Gp--~~~~~H~~~---E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 375 TAVNDTRYYSVDYGIPALCYGP--YGQGPHAFD---ERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp SSCCTHHHHHHTTCCCEEECCC--CEECTTSTT---CEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred eeeccHHHHHhhCCCCEEEECC--CCccCCCCC---ceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 3579999998756999985432 245678877 7888999999999999999998864
No 66
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=24.81 E-value=77 Score=33.85 Aligned_cols=55 Identities=18% Similarity=0.218 Sum_probs=44.2
Q ss_pred CCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 004085 154 TSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASS 214 (774)
Q Consensus 154 ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~~ 214 (774)
...+|...|.+ .|+|++.+..- ...-|++. |.++.+.+....+.+..++.+++..
T Consensus 340 ~g~tD~~~~~~-~giP~~~~g~g--~~~~H~~~---E~v~~~~l~~~~~~~~~~~~~l~~~ 394 (396)
T 3rza_A 340 GGGSDGSIINT-FGIPSVILGVG--YEKIHTTN---ERMPIKSLNLLASQVLEIIKIVARQ 394 (396)
T ss_dssp SSCCHHHHHGG-GTCCEEEEECC--CBSTTSTT---CEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeccHHHHhh-CCCcEEEECCC--CCCCCCCc---ceeEHHHHHHHHHHHHHHHHHHHHh
Confidence 35799999987 69999875432 34578877 7788999999999999999999863
No 67
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=22.88 E-value=85 Score=32.87 Aligned_cols=53 Identities=17% Similarity=0.207 Sum_probs=43.0
Q ss_pred CCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 155 SATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 155 s~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
..||...|.+ .|+|++.+... ...-|++. |+++.+.+....+.+..++++|.+
T Consensus 324 g~tDa~~~~~-~g~~~v~~Gp~--~~~~H~~~---E~i~~~~l~~~~~i~~~~i~~ll~ 376 (377)
T 3isz_A 324 GTSDGRFIAL-MGAEVVEFGPL--NSTIHKVN---ECVSVEDLGKCGEIYHKMLVNLLD 376 (377)
T ss_dssp SCCSHHHHHT-TTCEEEECCSB--CTTTTSTT---CEEEHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHH-cCCCEEEECCC--CCcccCCC---CcEEHHHHHHHHHHHHHHHHHHhh
Confidence 5799998887 79999875433 34578887 788899999999999999998865
No 68
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=21.72 E-value=96 Score=32.65 Aligned_cols=52 Identities=19% Similarity=0.265 Sum_probs=41.7
Q ss_pred CCCCchHHHhhcCCCeEEEEeeeCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 004085 154 TSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQA 211 (774)
Q Consensus 154 ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~~v~~l 211 (774)
...+|...|.+ .|+|++.+..- ...-|++. |+++.+.+....+.+..+++++
T Consensus 320 ~g~~D~~~~~~-~gip~~~~g~~--~~~~H~~~---E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 320 GGGSDANVIAG-HGIPTVNLAVG--YEEIHTTN---EKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp SSCCHHHHHHH-TTCCEEEEECC--CBSTTSTT---CEEEHHHHHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHh-CCCCEEEecCC--CCcCcCCc---eEEEHHHHHHHHHHHHHHHHHh
Confidence 35799999987 79999865432 34578876 7888999999999999999887
No 69
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=20.81 E-value=50 Score=35.28 Aligned_cols=55 Identities=11% Similarity=0.103 Sum_probs=42.0
Q ss_pred CCCCchHHHhhcCCCeEEEEeeeCCCCCCCC-cCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 004085 154 TSATDFQVYKEVAGLSGLDFAYTDKSAVYHT-KNDKLDLLKPGSLQHLGENMLAFLLQAAS 213 (774)
Q Consensus 154 ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT-~~Dt~d~id~~slq~~g~~vl~~v~~la~ 213 (774)
...+|...|.+ .|+|++. .+-......|+ +. |+++.+.+....+.+..++.++++
T Consensus 336 ~g~tD~~~~~~-~giP~~~-~~G~~~~~~H~~~~---E~i~~~~l~~~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 336 GGGTDAAYAAL-SGKPVIE-SLGLPGFGYHSDKA---EYVDISAIPRRLYMAARLIMDLGA 391 (393)
T ss_dssp SCCCTHHHHGG-GSCCEEC-CCSCEEECTTSSSC---CEEEGGGHHHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHHh-CCCCEEE-eCCCCCCCccCCCc---ceEEehhHHHHHHHHHHHHHHHhc
Confidence 45799999987 7899973 22222235688 66 778888999999999999999875
Done!