Query 004090
Match_columns 774
No_of_seqs 323 out of 850
Neff 6.1
Searched_HMMs 46136
Date Thu Mar 28 17:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004090.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004090hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02219 probable galactinol-- 100.0 1E-220 2E-225 1856.4 74.1 773 1-774 1-775 (775)
2 PLN02684 Probable galactinol-- 100.0 2E-216 4E-221 1820.8 72.0 744 1-774 1-750 (750)
3 PLN02355 probable galactinol-- 100.0 1E-215 3E-220 1819.7 73.7 749 1-774 1-758 (758)
4 PLN02982 galactinol-raffinose 100.0 8E-213 2E-217 1785.2 68.8 735 4-774 21-865 (865)
5 PLN02711 Probable galactinol-- 100.0 2E-209 4E-214 1765.0 70.2 736 1-774 18-777 (777)
6 PF05691 Raffinose_syn: Raffin 100.0 1E-202 3E-207 1725.3 66.2 719 7-758 1-747 (747)
7 PLN02229 alpha-galactosidase 100.0 2E-37 4.3E-42 342.4 29.3 338 197-656 62-422 (427)
8 PLN02692 alpha-galactosidase 100.0 1.3E-37 2.8E-42 342.6 27.2 334 197-654 55-411 (412)
9 PLN02808 alpha-galactosidase 100.0 1.1E-36 2.4E-41 334.5 26.9 331 197-653 31-385 (386)
10 PLN03231 putative alpha-galact 100.0 8.1E-35 1.8E-39 316.5 23.1 288 199-519 2-334 (357)
11 PLN02899 alpha-galactosidase 100.0 3.4E-33 7.5E-38 315.6 22.2 294 195-520 28-368 (633)
12 KOG2366 Alpha-D-galactosidase 99.9 5.5E-27 1.2E-31 250.2 16.3 338 198-655 33-413 (414)
13 PF02065 Melibiase: Melibiase; 99.9 3.3E-25 7.2E-30 246.2 20.9 247 156-451 4-257 (394)
14 COG3345 GalA Alpha-galactosida 99.9 3.7E-23 8.1E-28 228.7 19.0 284 114-453 208-524 (687)
15 cd06592 GH31_glucosidase_KIAA1 99.4 7.1E-13 1.5E-17 143.8 12.9 150 196-390 11-166 (303)
16 cd06593 GH31_xylosidase_YicI Y 99.1 2.4E-09 5.1E-14 116.5 17.9 136 211-390 20-160 (308)
17 PRK10658 putative alpha-glucos 98.9 1.8E-07 3.9E-12 111.5 22.1 178 159-390 238-419 (665)
18 cd06595 GH31_xylosidase_XylS-l 98.7 3E-07 6.6E-12 99.5 16.7 210 193-459 7-219 (292)
19 PRK10426 alpha-glucosidase; Pr 98.7 5.1E-06 1.1E-10 98.9 26.8 181 159-390 179-364 (635)
20 cd06598 GH31_transferase_CtsZ 98.7 2.3E-07 5.1E-12 101.5 14.3 155 193-389 6-164 (317)
21 cd06599 GH31_glycosidase_Aec37 98.6 1.7E-07 3.7E-12 102.6 11.3 155 193-389 6-168 (317)
22 cd06591 GH31_xylosidase_XylS X 98.6 4.6E-07 1E-11 99.3 14.3 149 193-389 6-159 (319)
23 cd06594 GH31_glucosidase_YihQ 98.5 2.4E-06 5.1E-11 93.7 16.6 154 193-390 6-167 (317)
24 cd06597 GH31_transferase_CtsY 98.5 9.6E-06 2.1E-10 89.8 21.4 163 193-389 6-187 (340)
25 PF01055 Glyco_hydro_31: Glyco 98.5 3.7E-06 8.1E-11 95.9 17.0 171 160-389 1-180 (441)
26 cd06589 GH31 The enzymes of gl 98.4 9.4E-06 2E-10 86.7 17.1 74 204-308 13-87 (265)
27 cd06604 GH31_glucosidase_II_Ma 98.4 1.3E-06 2.8E-11 96.6 10.2 146 193-389 6-159 (339)
28 cd06602 GH31_MGAM_SI_GAA This 98.4 4.5E-06 9.7E-11 92.4 14.4 207 193-457 6-224 (339)
29 cd06600 GH31_MGAM-like This fa 98.3 7.8E-06 1.7E-10 89.6 13.6 147 193-389 6-160 (317)
30 cd06601 GH31_lyase_GLase GLase 98.1 1.8E-05 3.9E-10 87.3 11.9 126 193-388 6-132 (332)
31 COG1501 Alpha-glucosidases, fa 98.1 0.00019 4.2E-09 87.0 21.2 236 158-457 235-486 (772)
32 PLN02763 hydrolase, hydrolyzin 98.0 0.00027 5.9E-09 86.9 20.3 169 161-389 160-336 (978)
33 cd06603 GH31_GANC_GANAB_alpha 98.0 1.7E-05 3.7E-10 87.7 9.1 146 193-389 6-162 (339)
34 PF10566 Glyco_hydro_97: Glyco 97.9 9.7E-05 2.1E-09 79.1 12.6 127 206-418 23-149 (273)
35 KOG1065 Maltase glucoamylase a 96.4 0.12 2.5E-06 62.5 17.4 175 158-390 267-449 (805)
36 PF13200 DUF4015: Putative gly 92.2 1.7 3.7E-05 48.0 12.5 130 213-392 11-150 (316)
37 TIGR01515 branching_enzym alph 90.1 10 0.00022 45.8 17.3 144 211-390 152-299 (613)
38 cd06596 GH31_CPE1046 CPE1046 i 83.3 18 0.00038 39.0 12.6 160 213-486 43-203 (261)
39 PF02638 DUF187: Glycosyl hydr 75.2 44 0.00095 36.9 13.1 143 213-389 17-164 (311)
40 PRK12568 glycogen branching en 71.1 43 0.00094 41.3 12.7 141 270-429 311-462 (730)
41 PRK10785 maltodextrin glucosid 71.1 55 0.0012 39.5 13.5 64 213-301 177-241 (598)
42 KOG1066 Glucosidase II catalyt 70.1 31 0.00067 41.8 10.7 103 157-305 327-431 (915)
43 PRK14705 glycogen branching en 65.2 53 0.0011 42.9 12.2 141 270-430 807-959 (1224)
44 PRK10933 trehalose-6-phosphate 65.2 66 0.0014 38.4 12.5 35 357-392 172-206 (551)
45 PRK14706 glycogen branching en 61.5 74 0.0016 38.8 12.1 70 357-427 277-356 (639)
46 TIGR02456 treS_nterm trehalose 61.3 2.3E+02 0.005 33.7 16.0 69 357-427 169-238 (539)
47 PF00724 Oxidored_FMN: NADH:fl 60.3 92 0.002 34.7 11.9 134 212-389 33-172 (341)
48 TIGR02402 trehalose_TreZ malto 58.0 2.2E+02 0.0048 33.9 15.2 29 363-391 220-249 (542)
49 COG0296 GlgB 1,4-alpha-glucan 57.5 62 0.0013 39.2 10.3 143 212-394 162-311 (628)
50 cd02932 OYE_YqiM_FMN Old yello 57.2 84 0.0018 34.8 10.9 73 211-313 30-103 (336)
51 cd02871 GH18_chitinase_D-like 56.1 97 0.0021 34.0 11.0 64 361-431 92-155 (312)
52 cd04734 OYE_like_3_FMN Old yel 54.2 1.5E+02 0.0033 33.1 12.3 73 211-313 30-103 (343)
53 PRK05402 glycogen branching en 53.4 4E+02 0.0086 33.0 16.8 32 357-389 375-407 (726)
54 PRK14582 pgaB outer membrane N 53.3 2.1E+02 0.0046 35.1 14.0 92 285-393 380-472 (671)
55 PRK12313 glycogen branching en 43.7 6.1E+02 0.013 30.8 16.1 32 357-389 280-312 (633)
56 cd02930 DCR_FMN 2,4-dienoyl-Co 43.5 2.7E+02 0.0058 31.2 12.2 23 285-308 77-100 (353)
57 TIGR02403 trehalose_treC alpha 42.7 2.8E+02 0.006 33.1 12.7 34 357-391 165-198 (543)
58 PLN00196 alpha-amylase; Provis 41.0 4.4E+02 0.0095 30.6 13.6 83 194-301 25-107 (428)
59 PLN02447 1,4-alpha-glucan-bran 40.2 7.2E+02 0.016 31.2 15.8 65 358-423 362-440 (758)
60 PRK13523 NADPH dehydrogenase N 38.2 4.9E+02 0.011 29.1 13.1 28 361-388 134-164 (337)
61 cd02803 OYE_like_FMN_family Ol 37.0 2.1E+02 0.0045 31.3 9.9 23 285-308 77-100 (327)
62 cd02879 GH18_plant_chitinase_c 36.4 2.3E+02 0.0049 30.9 10.0 66 360-431 89-157 (299)
63 PF15016 DUF4520: Domain of un 35.9 1E+02 0.0022 27.8 5.8 50 713-762 6-59 (85)
64 cd02929 TMADH_HD_FMN Trimethyl 32.3 7.8E+02 0.017 27.8 13.8 23 285-308 83-106 (370)
65 PRK14839 undecaprenyl pyrophos 32.0 2.5E+02 0.0054 30.1 9.0 19 287-306 42-60 (239)
66 KOG2500 Uncharacterized conser 30.9 31 0.00068 36.2 2.0 34 625-658 43-77 (253)
67 PLN02784 alpha-amylase 30.1 9.7E+02 0.021 30.6 14.6 78 196-301 505-583 (894)
68 PRK14833 undecaprenyl pyrophos 30.1 2.3E+02 0.005 30.2 8.4 39 442-485 176-214 (233)
69 cd04733 OYE_like_2_FMN Old yel 28.9 6E+02 0.013 28.1 11.9 23 285-308 82-105 (338)
70 PF13200 DUF4015: Putative gly 28.9 1.4E+02 0.003 33.2 6.8 63 165-230 242-305 (316)
71 PF14307 Glyco_tran_WbsX: Glyc 27.4 7.7E+02 0.017 27.5 12.5 146 207-430 50-199 (345)
72 cd00598 GH18_chitinase-like Th 26.9 2.1E+02 0.0045 28.7 7.3 65 360-432 85-149 (210)
73 cd04747 OYE_like_5_FMN Old yel 26.7 5.1E+02 0.011 29.4 10.9 29 361-389 136-167 (361)
74 cd06548 GH18_chitinase The GH1 25.2 2.5E+02 0.0055 30.8 8.0 30 360-389 106-135 (322)
75 COG1649 Uncharacterized protei 24.9 1.1E+03 0.025 27.3 13.4 142 211-390 60-210 (418)
76 PLN02960 alpha-amylase 22.9 5.6E+02 0.012 32.6 10.9 69 357-426 527-608 (897)
77 cd02875 GH18_chitobiase Chitob 22.9 3.5E+02 0.0077 30.4 8.8 32 359-390 92-123 (358)
78 PLN02411 12-oxophytodienoate r 22.5 4.2E+02 0.0091 30.3 9.3 23 285-308 87-110 (391)
79 PLN02361 alpha-amylase 22.3 1.2E+03 0.027 26.8 14.0 81 193-301 11-91 (401)
80 TIGR02103 pullul_strch alpha-1 21.5 6.7E+02 0.014 32.1 11.4 45 360-414 470-515 (898)
81 cd06544 GH18_narbonin Narbonin 21.4 1.7E+02 0.0037 31.3 5.6 28 362-389 96-123 (253)
82 PLN03244 alpha-amylase; Provis 21.1 9.1E+02 0.02 30.6 12.0 62 360-422 505-579 (872)
No 1
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=100.00 E-value=1.1e-220 Score=1856.40 Aligned_cols=773 Identities=86% Similarity=1.391 Sum_probs=741.6
Q ss_pred CcccceeEeeCCeEEEeCeeeecCCCCCeEEeecCCCCcccceeeecccCCCCcceeeeCCCccCceeEEEeeecccccc
Q 004090 1 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMT 80 (774)
Q Consensus 1 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lg~~~~~r~~~l~r~k~~W~~ 80 (774)
||||+.|+|+||+|+|+|+++|++||+||+++|.+....+.|+|+||++++++|||++|||+++++|||||||||+|||+
T Consensus 1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~F~G~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WWmt 80 (775)
T PLN02219 1 MTVTPKISINNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATASHSKSLHVFPVGVLEGLRFMCCFRFKLWWMT 80 (775)
T ss_pred CcccceeEEcCCeEEECCEEeeccCCCceEecCCCCCCCCcceEEeeecCCcccceeeecccccCcEEeeeeehhhhccc
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccEEEEEecCCCCCC-CCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceeccccceEE
Q 004090 81 QRMGTCGKDVPLETQFMLVESKDNSES-DQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLV 159 (774)
Q Consensus 81 pr~g~~~~~ip~etq~ll~e~~~~~~l-~~~~~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~~sg~~~~~~~~~~~~v 159 (774)
||+|++++|||.||||+|+|.++.... ..+++++.|+|+|||++|.|||+||++++++|+||+|||++.++++++..+|
T Consensus 81 ~~~G~~g~dip~eTQ~~l~e~~~~~~~~~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~~~~v 160 (775)
T PLN02219 81 QRMGSCGKDIPLETQFMLLESKDEVEGGNGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLHLV 160 (775)
T ss_pred hhhccCCCcCCcceEEEEEEcCCCccccccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCccccccccceEE
Confidence 999999999999999999999863211 1122345799999999999999999999999999999999999999999999
Q ss_pred EEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecc
Q 004090 160 YTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG 239 (774)
Q Consensus 160 ~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDG 239 (774)
||++|+|||++|++|++++++|+++|++|++|++|+++|+||||||||||++|||++|++++++|+++|+|++|||||||
T Consensus 161 ~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDDG 240 (775)
T PLN02219 161 YMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDG 240 (775)
T ss_pred EEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCC
Q 004090 240 WQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPA 319 (774)
Q Consensus 240 WQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~ 319 (774)
||+.+++++ +.++...+|.||.+||++|++|.||++......||.|||++|++||+++|||||||||||+||||||+|+
T Consensus 241 wQsi~~~~~-~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~ 319 (775)
T PLN02219 241 WQQIENKEK-DENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPA 319 (775)
T ss_pred ccccccccc-cccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCC
Confidence 999998764 5577888999999999999999999954334578999999999999999999999999999999999999
Q ss_pred CcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCC
Q 004090 320 ADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHG 399 (774)
Q Consensus 320 ~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~ 399 (774)
+++|++|+++++||+.+||..+++||++++++..+|+++++|+++++|||+||+||+++||||||||+|+++++++.+++
T Consensus 320 ~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~g 399 (775)
T PLN02219 320 AAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHG 399 (775)
T ss_pred CcccccccccccccccCCCccccCcchhhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccccccccEEEecCCCCCCCccchhhHHHHHHhhhhhccCCCCC
Q 004090 400 GRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQP 479 (774)
Q Consensus 400 g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~P 479 (774)
+|++++++||+||++|++|||+++++|+||||+++++|+.++++++|+||||||++|++|++||++|||||||||+++||
T Consensus 400 grv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v~P 479 (775)
T PLN02219 400 GRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQP 479 (775)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHhhhhcCCCCceeecCCCCCCCccccccCcCCCCcceEEEEe
Q 004090 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWN 559 (774)
Q Consensus 480 DwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~lv~pdG~ilr~~~pg~pt~d~lf~dp~~d~~~lLki~n 559 (774)
|||||||.||+|+|||++||||||||||||+||+|||+||||||+|||+||||++||||||||||.||++|++++|||||
T Consensus 480 DWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLKIwn 559 (775)
T PLN02219 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKIWN 559 (775)
T ss_pred CchhceecCccHHHHHHHHhhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCCCeeeE
Q 004090 560 VNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPV 639 (774)
Q Consensus 560 ~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~vy~~~sg~~~~l~~~~~~~v 639 (774)
+|+++||||+|||||++||+++++|++|+.++.++|+.|++.||+++.++++.+|+++|+||+|++|+++++++++.++|
T Consensus 560 ~n~~~gviG~FNcqGagW~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~~~~v 639 (775)
T PLN02219 560 VNKCTGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPV 639 (775)
T ss_pred cccccceEEEEeccCCCCCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCc-ccccccccCCCCCCceEEEEE
Q 004090 640 TLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEV-SSELTTSLSDNRSPTATISLK 718 (774)
Q Consensus 640 ~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~av~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~ 718 (774)
+|++++|||||++||+.+..+++||||||+||||++|||+++++....+.+.++++|+ .|+++++++.+......|+|+
T Consensus 640 tL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 719 (775)
T PLN02219 640 TLKVLEYELFHFCPLKEIATNISFAPIGLLDMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTATIALS 719 (775)
T ss_pred EecCCcEEEEEEeeEEEecCCcEEEecchhhcccCceeeEEeEeecccccccccccccccccccccccccCCCCceEEEE
Confidence 9999999999999999999899999999999999999999999986666666677765 688888888777777789999
Q ss_pred EEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeEEeC
Q 004090 719 VRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 774 (774)
Q Consensus 719 vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~i~~ 774 (774)
|||||+||+|||++|++|.|||++++|+|++++|||+|+||||++++++|.|||++
T Consensus 720 v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~~~sg~~~~~l~~~~~~~~~~~v~~~~ 775 (775)
T PLN02219 720 VRGCGRFGAYSSQRPLKCAVGSTETDFTYDAEVGLLTLTLPVTEEEMYRWHVEIQV 775 (775)
T ss_pred EEcccceeeEecCCCeEEEECCEEeeeEEcCCCCeEEEEccCCcccCceeeEEEeC
Confidence 99999999999999999999999999999999999999999999999999999985
No 2
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=2e-216 Score=1820.82 Aligned_cols=744 Identities=57% Similarity=1.055 Sum_probs=714.2
Q ss_pred CcccceeEeeCCeEEEeCeeeecCCCCCeEEeecCCCCcccceeeecccCCCCcceeeeCCCccCceeEEEeeecccccc
Q 004090 1 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMT 80 (774)
Q Consensus 1 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lg~~~~~r~~~l~r~k~~W~~ 80 (774)
||||+.|+|+||+|+|+|+++|++||+||+++|.+....+.|+|+||++++++|||+++||+++++|||||||||+|||+
T Consensus 1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~f~g~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WWmt 80 (750)
T PLN02684 1 MTIKPAVRISDGKLIVKNRTILTGVPDNVIATSGSESGPVEGVFVGAVFDKENSKHVVSLGTLRDVRFMACFRFKLWWMA 80 (750)
T ss_pred CcccceeEEcCCeEEECCEEeeccCCCceEecCCCCCCcCcceEEeeecCCcccceeeecccccCcEeehhhhhhhhhcc
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccEEEEEecCCCCCCCCCC----CCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceeccccc
Q 004090 81 QRMGTCGKDVPLETQFMLVESKDNSESDQDD----GPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGL 156 (774)
Q Consensus 81 pr~g~~~~~ip~etq~ll~e~~~~~~l~~~~----~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~~sg~~~~~~~~~~ 156 (774)
||+|++++|||.||||||+|.++++++..|+ +++.|+|+|||++|+|||+||++++++++||+|||+++++++++.
T Consensus 81 ~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~Y~v~lPi~eg~fRa~Lqg~~~d~~~ic~eSg~~~v~~s~~~ 160 (750)
T PLN02684 81 QKMGDMGRDIPLETQFLLVETKDGSHLESDGANEENQKVYTVFLPLIEGSFRACLQGNVNDELELCLESGDVDTKRSSFT 160 (750)
T ss_pred hhhcCCCCCCCchhEEEEEEcCCCcccccccccccCCcceEEEEEecCCceEEEecCCCCCcEEEEEecCCccccccccc
Confidence 9999999999999999999999877665544 234699999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEE
Q 004090 157 YLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLII 236 (774)
Q Consensus 157 ~~v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vII 236 (774)
.+|||++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|++++++|+++|+|++||||
T Consensus 161 ~~~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vII 240 (750)
T PLN02684 161 HSLFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVII 240 (750)
T ss_pred eeEEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCc
Q 004090 237 DDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGV 316 (774)
Q Consensus 237 DDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI 316 (774)
|||||+..++++ +.++. ..+.||.+||++|++|+|||+.. .++.|||++|++||+++|||||||||||+||||||
T Consensus 241 DDGwQs~~~d~~-~~~~~-~~~~q~~~rL~~f~en~KF~~~~---~p~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv 315 (750)
T PLN02684 241 DDGWQSVGGDPT-VEAGD-EKKEQPLLRLTGIKENEKFKKKD---DPNVGIKNIVNIAKEKHGLKYVYVWHAITGYWGGV 315 (750)
T ss_pred eccccccccccc-ccccc-cccchhhhhhccCcccccccccc---CCCccHHHHHHHHHhhcCCcEEEEEeeeccccccc
Confidence 999999988754 22332 34589999999999999999531 23489999999999999999999999999999999
Q ss_pred CCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccC
Q 004090 317 KPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGA 396 (774)
Q Consensus 317 ~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~ 396 (774)
+|++++|++|++++.+|+.+||+..++|+++.+++..+|+|+++|+++++|||+||+||+++||||||||+|+.+++++.
T Consensus 316 ~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d~l~~~g~glv~P~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~le~l~~ 395 (750)
T PLN02684 316 RPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTDVMTLQGLGLVNPKKVYKFYNELHSYLADAGIDGVKVDVQCILETLGA 395 (750)
T ss_pred CCCCcchhhccccccccccCccccccCccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEChhhhHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccccccccEEEecCCCCCCCccchhhHHHHHHhhhhhccCC
Q 004090 397 GHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEF 476 (774)
Q Consensus 397 ~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~ 476 (774)
++++|++++++||+||++|++|||+++++|+||||+++++|++++++++|+||||||++|++|++||++|||||||||++
T Consensus 396 ~~ggrv~l~~ay~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~sk~sav~R~SDDF~p~dP~sh~~Hi~~~AyNSLllg~~ 475 (750)
T PLN02684 396 GLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEF 475 (750)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeeeccccccCCCccchhhhhhhhhhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHhhhhcCCCCceeecCCCCCCCccccccCcCCCCcceEE
Q 004090 477 MQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLK 556 (774)
Q Consensus 477 ~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~lv~pdG~ilr~~~pg~pt~d~lf~dp~~d~~~lLk 556 (774)
+|||||||||.||+|+|||++||||||||||||+||+||++||||||+|||+||||++||||||||||.||++|++++||
T Consensus 476 v~PDWDMFqS~hp~A~~HAaaRAisGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDcLF~DP~~dg~slLK 555 (750)
T PLN02684 476 MQPDWDMFHSLHPAAEYHASARAISGGPLYVSDAPGKHNFELLKKLVLPDGSILRARLPGRPTRDCLFSDPARDGVSLLK 555 (750)
T ss_pred cccCcccceecCccHHHHHHHHhhcCCceEEecCCCCccHHHHHhhhCCCCcccccccCCccchhhhccCcccCCccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCC-CCCcEEEEEeccceEEecCCCC
Q 004090 557 VWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAG-WNGDAIVYAHRSGEVVRLPKGA 635 (774)
Q Consensus 557 i~n~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~-~~~~~~vy~~~sg~~~~l~~~~ 635 (774)
|||+|+++||||+|||||++||++.+++.+|+.++.++|+.|+++|++++.++++.. |+++|+||+|++|+++++++++
T Consensus 556 Iwn~n~~tGViG~FNcqGagw~~~~~~~~~~~~~~~~~s~~v~~~Dv~~~~~~a~~~~w~~~~~vy~h~s~~l~~l~~~~ 635 (750)
T PLN02684 556 IWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGRDVHLIAEAATDPNWNGDCAVYCHSRGELITMPYNA 635 (750)
T ss_pred EEEecCCCceEEEEeccCCccCccccccccCCCCCccceeeecccccchhhhhccCCCCCCCEEEEEecCCeEEecCCCC
Confidence 999999999999999999999999999999999999999999999999999999874 9999999999999999999999
Q ss_pred eeeEEecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCcccccccccCCCCCCceEE
Q 004090 636 SVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATI 715 (774)
Q Consensus 636 ~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 715 (774)
.++|+|++++|||||++||+++.++++||||||+||||++|||+++++.. . ..+|
T Consensus 636 ~~~vtL~~~~~Ei~t~~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~-----------------------~--~~~v 690 (750)
T PLN02684 636 SLPVSLKVLEHEIFTVTPIKHLAPGFSFAPLGLINMYNAGGAIEGLKYEV-----------------------K--KGKV 690 (750)
T ss_pred ceEEEecCCcEEEEEEeeEEEecCCcEEEecchhhcccCcceEEEEEEec-----------------------c--cceE
Confidence 99999999999999999999999899999999999999999999999874 1 2349
Q ss_pred EEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcc-eeeeEEeC
Q 004090 716 SLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMY-RWPVEIQV 774 (774)
Q Consensus 716 ~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~-~~~v~i~~ 774 (774)
+|+|||||+||+|||++|++|.|||++++|+|++++|+|+|+||||+++++ +|+|||++
T Consensus 691 ~v~vkg~G~~g~YsS~~P~~c~v~~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~v~~~~ 750 (750)
T PLN02684 691 VMEVKGCGKFGAYSSVKPRRCVVESNEIAFEYDSSSGLVTFELDKMPEEGKRLHLVEVEL 750 (750)
T ss_pred EEEEEecceeEEEEcCCCcEEEECCEEEeeEEcCCCCeEEEEcCCCccccCcceEEEEeC
Confidence 999999999999999999999999999999999999999999999999999 99999974
No 3
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=100.00 E-value=1.3e-215 Score=1819.71 Aligned_cols=749 Identities=64% Similarity=1.157 Sum_probs=720.2
Q ss_pred CcccceeEeeCCeEEEeCeeeecCCCCCeEEeecCCCCcccceeeecccCCCCcceeeeCCCccCceeEEEeeecccccc
Q 004090 1 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMT 80 (774)
Q Consensus 1 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lg~~~~~r~~~l~r~k~~W~~ 80 (774)
||||+.|+|+||+|+|+|+++|++||+||+++|.+....+.|+|+||++++++|||++|||+++++|||||||||+|||+
T Consensus 1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~f~g~~~~~~~srhv~~~G~l~~~rf~~~frfK~WWmt 80 (758)
T PLN02355 1 MTVGAGISVADGNLVVLGNRVLHDVHDNVLVTPASGGALINGAFIGVRSDQVGSRRVFPVGKLEDLRFMCVFRFKLWWMT 80 (758)
T ss_pred CcccceeEEeCCeEEECCEEeeccCCCceEecCCCCCCcCcceEEeeecCCCccceeeecccccCcEeeeeehhhhhhcc
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccEEEEEecCCCCCCCC--CC---CCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceecccc
Q 004090 81 QRMGTCGKDVPLETQFMLVESKDNSESDQ--DD---GPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQG 155 (774)
Q Consensus 81 pr~g~~~~~ip~etq~ll~e~~~~~~l~~--~~---~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~~sg~~~~~~~~~ 155 (774)
||+|++++|||.||||||+|.++++++.. |+ +++.|+|+|||++|+|||+||++++++++||+|||++.++++++
T Consensus 81 ~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~~Y~v~lPi~~g~fra~Lqg~~~~~l~ic~eSG~~~v~~~~~ 160 (758)
T PLN02355 81 QRMGTCGQDIPFETQFLIVEARDGSHLGNGGEGGEDQSSVYTVFLPILEGDFRAVLQGNEHNELEICLESGDPAVDEFEG 160 (758)
T ss_pred ccccCCCcCCChhheEEEEEcCCcccccccccccCCCCceeEEEEeecCCceEEEEecCCCCcEEEEEEcCCCccccccC
Confidence 99999999999999999999998655431 11 34579999999999999999999999999999999999999999
Q ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEE
Q 004090 156 LYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLI 235 (774)
Q Consensus 156 ~~~v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vI 235 (774)
.++||+++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|+++++.|+++|+|++|||
T Consensus 161 ~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~vi 240 (758)
T PLN02355 161 SHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKFVI 240 (758)
T ss_pred ceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCCccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccccCCCCcccchhhccccccccccCCCccCCccccc-c---cCCCCCCChHHHHHHHHhcCCCcEEEEEeeccc
Q 004090 236 IDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKK-C---QNSEQVSGLKHVVDESKQNHNVKYVYVWHALAG 311 (774)
Q Consensus 236 IDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~-~---~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~G 311 (774)
||||||+..++.+ +.++...++.||.+||.+|++|.|||+. . ..+.+|.|||++|+.||+++|||||||||||+|
T Consensus 241 IDDGwQs~~~d~~-~~~~~~~~~~q~~~rL~~f~~n~KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL~G 319 (758)
T PLN02355 241 IDDGWQSVGMDPT-GIECLADNSANFANRLTHIKENHKFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYVWHAITG 319 (758)
T ss_pred Eeccccccccccc-cccccccccchhhhhhccccccccccccccccccccCCCCcHHHHHHHHHhhcCCcEEEEeeeecc
Confidence 9999999977654 4567788899999999999999999942 1 123347899999999999999999999999999
Q ss_pred ccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccch
Q 004090 312 YWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNII 391 (774)
Q Consensus 312 YWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l 391 (774)
|||||+|++++|++|+++++||+.+||+.+++|+++++++..+|+++++|+++++|||+||+||+++||||||||+|+.+
T Consensus 320 YWGGv~P~~~~~~~Y~~~~~~p~~spGv~~~~~~~a~d~i~~~G~glv~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q~~l 399 (758)
T PLN02355 320 YWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALESITTNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQNIL 399 (758)
T ss_pred eecCcCCCCcccccccccccccccCCcccccCcchhhhhcccCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccccccccEEEecCCCCCCCccchhhHHHHHHhhhh
Q 004090 392 ETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTL 471 (774)
Q Consensus 392 ~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl 471 (774)
++++.++++|++++++||+||++|++|||+++++|+||||+++++|++++++++|+||||||++|++|++||++||||||
T Consensus 400 e~l~~g~ggrv~la~~y~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~~AyNSL 479 (758)
T PLN02355 400 ETLGAGHGGRVKLARKYHQALEASIARNFPDNGIISCMSHNTDGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAYNTI 479 (758)
T ss_pred HHhhcCCCcHHHHHHHHHHHHHHHHHHhCCCCceEEecccCchhhcccccceeeeeccccccCCCccCchhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHhhhhcCCCCceeecCCCCCCCccccccCcCCCC
Q 004090 472 FLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDG 551 (774)
Q Consensus 472 ~~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~lv~pdG~ilr~~~pg~pt~d~lf~dp~~d~ 551 (774)
|||+++|||||||||.||+|+|||++||||||||||||+||+|||+||||||+|||+||||++||||||||||.||++|+
T Consensus 480 llg~~v~PDWDMF~S~hp~A~~HAaaRAisGGPIYvSD~PG~hdf~LLk~LvlpdGsIlR~~~pg~PtrDclF~Dp~~dg 559 (758)
T PLN02355 480 FLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPARDG 559 (758)
T ss_pred hhccccccCcccceecCccHHHHHHHHhccCCcEEEecCCCCccHHHHHhhhCCCCceeccccCCCcchhhhccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeecCCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEec
Q 004090 552 TSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRL 631 (774)
Q Consensus 552 ~~lLki~n~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~vy~~~sg~~~~l 631 (774)
+++|||||+|+++||||+|||||++||+++++|++|++++.++++.|++.||+++.+++++.|+++++||+|++|++.++
T Consensus 560 ~slLKIwn~nk~sGviG~FNcqGagw~~~~~~~~~~~~~~~~l~~~v~~~Dv~~~~~~a~~~w~~~~~vy~~~sg~l~~~ 639 (758)
T PLN02355 560 KSLLKIWNLNEFTGVIGVFNCQGAGWCRVGKKNLIHDEQPGTITGVIRAKDVDYLPKVADDEWTGDSIVYSHLGGEVVYL 639 (758)
T ss_pred ceEEEEEEcCCcccEEEEEeccCCcccchhccccccCCCCceeEEEEccccccchhhccccCCCCCeEEEEecCceEEec
Confidence 99999999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CCCCeeeEEecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCcccccccccCCCCCC
Q 004090 632 PKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSP 711 (774)
Q Consensus 632 ~~~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (774)
++++.++|+|++++|||||+|||+++.++++||||||+||||++|||+++++.. .+
T Consensus 640 ~~~~~~~vtL~~~~~eiftv~Pi~~~~~~~~fApIGL~~m~nsggAV~~~~~~~------------------------~~ 695 (758)
T PLN02355 640 PKDASLPVTLKSREYEVFTVVPVKELSNGVKFAPIGLVKMFNSGGAIKELRYDE------------------------DT 695 (758)
T ss_pred CCCCceEEEecCCceEEEEEeeEEEecCCcEEEEeehhhhccCcceEEEEEeec------------------------cc
Confidence 989999999999999999999999999899999999999999999999999863 24
Q ss_pred ceEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeEEeC
Q 004090 712 TATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 774 (774)
Q Consensus 712 ~~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~i~~ 774 (774)
+.+++|+|||||+||+|||.+|++|.|||.|++|+|++++|||+|+||||++++++|.|||+|
T Consensus 696 ~~~v~v~vkg~G~~g~YsS~~P~~c~vd~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~~~~~ 758 (758)
T PLN02355 696 NATVRMKVRGSGLVGAYSSSRPRRVTVDSKEVEFRYEEGSGLVTFDLGVPEEELYLWNVTVEL 758 (758)
T ss_pred ccEEEEEEEecceEEEEecCCCcEEEECCeEeeeEEcCCCCeEEEEcCCCcccCceeEEEEeC
Confidence 567999999999999999999999999999999999999999999999999999999999986
No 4
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=8.1e-213 Score=1785.19 Aligned_cols=735 Identities=38% Similarity=0.718 Sum_probs=697.2
Q ss_pred cceeEeeCCeEEEeCeeeecCCCCCeEEeecCCC-----Cc-----------ccceeeecccCCCCcceeeeCCCccCce
Q 004090 4 APNISISDGNLVVHGKTILTGVPDNIILTPGNGV-----GL-----------VAGAFIGATASHSKSLHVFPMGVLEDLR 67 (774)
Q Consensus 4 ~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~-----~~-----------~~g~~~~~~~~~~~~~~~~~lg~~~~~r 67 (774)
...|+|+||+|+|+|+++|++||+||+++|+++. ++ +.|+|+||++++++|||+++||+++++|
T Consensus 21 ~~~~~l~~g~l~v~G~~~L~~Vp~NV~~tp~s~~~~~~~~p~~~~~~~~~~~~~g~FlG~~~~~~~srhv~~lG~l~~~r 100 (865)
T PLN02982 21 PNYFDLSDGKLSVKGVPLLSDVPNNVTFTPFSSISISSDAPLPLLQRVQSNSHKGGFLGFTKESPSDRLTNSLGKFEGRD 100 (865)
T ss_pred CceeEecCCeEEECCEEeecCCCCceEecCcccccccccCccccccccccccccceEEeeecCCCccceeeecccccCce
Confidence 3479999999999999999999999999996542 22 5699999999999999999999999999
Q ss_pred eEEEeeecccccccccCCCCCCCCcccEEEEEecCCCCCCCCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCC
Q 004090 68 FMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGD 147 (774)
Q Consensus 68 ~~~l~r~k~~W~~pr~g~~~~~ip~etq~ll~e~~~~~~l~~~~~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~~sg~ 147 (774)
||||||||+|||+||+|++++|||.||||||+|.+++. .|+|+||+++|.|||+||++.+++++||+|||+
T Consensus 101 Fms~FRfK~WWmt~~vG~~G~Dip~ETQ~llle~~~~~---------~Yvv~lP~ieG~FRa~Lqg~~~~~~~ic~ESg~ 171 (865)
T PLN02982 101 FLSIFRFKTWWSTMWIGSSGSDLQMETQWVLLKVPEID---------SYVLIIPLIEGSFRSALHPGEDGHVMICAESGS 171 (865)
T ss_pred EEeeeehhhhccchhhcCCCCCCChhheEEEEEcCCCc---------eEEEEEEecCCceEEEecCCCCCCEEEEEecCC
Confidence 99999999999999999999999999999999999743 699999999999999999999999999999999
Q ss_pred cceeccccceEEEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhC
Q 004090 148 NAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAG 227 (774)
Q Consensus 148 ~~~~~~~~~~~v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~ 227 (774)
+.|+++++.+++|||+|+|||++|++|++++|.|++||+++++|++|.++|+||||||||||++||+++|++++++|+++
T Consensus 172 ~~V~~s~~~~~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~l~~g 251 (865)
T PLN02982 172 TKVKASSFNSIAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKALPKIVDKFGWCTWDAFYLTVDPVGVWHGVKEFAEG 251 (865)
T ss_pred ccccccccceEEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccCccccccceEEeechhhcccCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEecccccccCCCC---cccchhhccccccccccCCCccCCccccccc-------------------------
Q 004090 228 GTPPKFLIIDDGWQQIENKPK---EESNCIVQEGAQFASRLTGIKENSKFQKKCQ------------------------- 279 (774)
Q Consensus 228 Gi~~~~vIIDDGWQ~~~~~~~---~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~------------------------- 279 (774)
|+||+|||||||||++..+.+ ++.++...+|.||.+||.+|++|+||++++.
T Consensus 252 G~pprfvIIDDGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~En~KFrky~~~~~~~~~~~~f~~~~~~~~i~~~~~ 331 (865)
T PLN02982 252 GVPPRFLIIDDGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFDECEKFRNYKGGSMLGPDPPHFDPKKPKMLIYKAIE 331 (865)
T ss_pred CCCccEEEEecchhhccccccCCchhhhhccccccchhhhhhcchhhhhhhccccccccCCCcccccccccchhhhcccc
Confidence 999999999999999987632 2456788999999999999999999996321
Q ss_pred -----------------------------------------------------CCCCCCChHHHHHHHHhcC-CCcEEEE
Q 004090 280 -----------------------------------------------------NSEQVSGLKHVVDESKQNH-NVKYVYV 305 (774)
Q Consensus 280 -----------------------------------------------------~~~~~~GLk~~v~~Ik~~~-Glk~vgv 305 (774)
++..+.|||++|+.||+|| |||||||
T Consensus 332 ~~~a~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Glk~~v~~ik~k~~~vk~VyV 411 (865)
T PLN02982 332 REHAEKARKKAIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVSSESESSGSCKVSGSGMKAFTRDLRTKFKGLDDIYV 411 (865)
T ss_pred hhhhhhcccccccccccccchhhhhhhhhhhhccccccccccccccccccccccccCcccHHHHHHHHHHhCCCCCEEEE
Confidence 1345679999999999999 4999999
Q ss_pred EeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEE
Q 004090 306 WHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKV 385 (774)
Q Consensus 306 Whal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKv 385 (774)
||||+||||||+|++ ++|++++++|+.+||+.+++||+++|++..+|+++++|+++++|||+||+||+++|||+|||
T Consensus 412 WHAL~GYWGGV~P~~---~~y~~k~~~p~~spg~~~~~~d~a~d~i~~~G~glv~P~~~~~FYd~~hsyLas~GVDgVKV 488 (865)
T PLN02982 412 WHALCGAWGGVRPGT---THLNAKVVPARLSPGLDGTMNDLAVDKIVEGGIGLVHPSQAGDFYDSMHSYLASVGITGVKV 488 (865)
T ss_pred eeeccCcccCcCCCC---CCCcceEEecccCccccccCcchhhhheecCceeccCHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 999999999999986 67999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCcc-ccccccEEEecCCCCCCCccchh----
Q 004090 386 DVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIY-SSKQTAVIRASDDYYPRDPASHT---- 460 (774)
Q Consensus 386 D~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~-~~~~~~~~R~SdDf~p~~p~~~~---- 460 (774)
|+|+.+++++++++||++++++||+||++|+++||++|++|+||||+++++| +.+++++.|+||||||++|++|+
T Consensus 489 DvQ~~Le~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~~~~~~~tk~sav~R~SDDF~p~dP~shp~g~~ 568 (865)
T PLN02982 489 DVIHTLEYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGVY 568 (865)
T ss_pred chhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCCcceeeeccccccCCCCCcCccccc
Confidence 9999999999999999999999999999999999999999999999999988 56888999999999999999988
Q ss_pred ----hHHHHHHhhhhhccCCCCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHhhhhcCCCCceeecCCCC
Q 004090 461 ----IHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPG 536 (774)
Q Consensus 461 ----~hi~~na~nsl~~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~lv~pdG~ilr~~~pg 536 (774)
+||++|||||||||+++|||||||||.||+|+|||++||||||||||||+||+|||+||||||+|||+||||++||
T Consensus 569 wlq~~Hi~~~AyNSLl~G~~v~PDWDMFqS~H~~A~fHAaaRAIsGGPIYvSD~pG~Hdf~lLk~LvlpDG~IlR~~~pg 648 (865)
T PLN02982 569 WLQGVHMIHCAYNSMWMGQIIQPDWDMFQSDHLCAEFHAGSRAICGGPVYVSDSVGGHDFDLLKKLVFPDGTIPRCQHYA 648 (865)
T ss_pred cccceeeeehhhhhHhhccccccCchhccccCchHHHHHHHHhhcCCCEEEeeCCCCccHHHHHhhhcCCCceeccCCCC
Confidence 4999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCcCCCCcceEEEEeecCCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhh--hhhCCCC
Q 004090 537 RPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMA--QIAGAGW 614 (774)
Q Consensus 537 ~pt~d~lf~dp~~d~~~lLki~n~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~--~~~~~~~ 614 (774)
||||||||.||++||+++|||||+|+++||||+|||||++||++++++++|++++.++|+.|+++||++.. +.++.+|
T Consensus 649 ~PTrDcLF~DPl~DGks~LKIWN~Nk~~GViG~FNCQGagW~~~~~~~~~~~~~~~~vtg~v~~~Dve~~~~~~~a~~~~ 728 (865)
T PLN02982 649 LPTRDCLFKNPLFDKKTILKIWNFNKFGGVIGAFNCQGAGWDPKEHRIKGYSECYKPVSGSVHVSDIEWDQKPEASQMGE 728 (865)
T ss_pred CCCcchhccCcccCCceEEEEEeccCcCceEEEEEeccCCCCchhccccccCCCCcceEEEEcHHHcccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985 5566779
Q ss_pred CCcEEEEEeccceEEecC-CCCeeeEEecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCCCC
Q 004090 615 NGDAIVYAHRSGEVVRLP-KGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLF 693 (774)
Q Consensus 615 ~~~~~vy~~~sg~~~~l~-~~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~av~~~~~~~~~~~~~~~ 693 (774)
+++++||+++++++.++. +++.++|+|++++|||||+|||+.+.++++||||||+||||+||||+++++...
T Consensus 729 ~~~~~vY~~~~~el~~~~~~~~~~~vtL~~~e~elftv~PI~~~~~~i~FApIGL~nM~NSgGAV~~~~~~~~------- 801 (865)
T PLN02982 729 AEEYAVYLNQAEELLLMTPKSEAIQITLQPSSFELFSFVPVTKLGSSAKFAPIGLTNMFNSGGTIQEMEYGES------- 801 (865)
T ss_pred cccEEEEEecCceEEEecCCCCcceEEeccceeEEEEEeeeEEccCCcceeeeehHhhccCCceeEEeeeccC-------
Confidence 999999999999999865 479999999999999999999999998999999999999999999999987521
Q ss_pred CCCcccccccccCCCCCCceEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeEEe
Q 004090 694 DGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQ 773 (774)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~i~ 773 (774)
+++.+++|+|||||+|++|||.+|++|.|||++++|+|+++ |+|+|+||||++++++|+|||+
T Consensus 802 ----------------g~~~~v~v~VrG~G~f~~Yss~~P~~c~vdg~ev~F~y~~~-g~l~~~lp~~~~~~~~~~v~~~ 864 (865)
T PLN02982 802 ----------------GGECSVKVKVKGGGRFLAYSSEAPKKCYLNGKEVGFEWEEE-GKLSFFVPWTEESGGISDVSFI 864 (865)
T ss_pred ----------------CccceEEEEEEecceEEEEecCCCeEEEECCeEeeeEECCC-CeEEEEccCCcccCceeeEEEe
Confidence 13456999999999999999999999999999999999997 9999999999999999999998
Q ss_pred C
Q 004090 774 V 774 (774)
Q Consensus 774 ~ 774 (774)
|
T Consensus 865 ~ 865 (865)
T PLN02982 865 F 865 (865)
T ss_pred C
Confidence 6
No 5
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=1.8e-209 Score=1764.97 Aligned_cols=736 Identities=39% Similarity=0.750 Sum_probs=694.2
Q ss_pred CcccceeEeeCCeEEEeCeeeecCCCCCeEEeecCCCCcc------cceeeecccCCCCcceeeeCCCccCceeEEEeee
Q 004090 1 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLV------AGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRF 74 (774)
Q Consensus 1 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~lg~~~~~r~~~l~r~ 74 (774)
||+++.|+|+||+|+|+|+++|++||+||+++|.+..... .|+|+||++++++|||+++||+++++||||||||
T Consensus 18 ~~~~~~~~l~~~~l~v~g~~~l~~vp~nv~~tp~~~~~~~~~~~~~~g~flG~~~~~~~srhv~~~G~l~~~rfm~~fRf 97 (777)
T PLN02711 18 GLNPSLITLEGSNFLANGHPFLSDVPDNITLTPSPYLPDNKPITVGAGSFVGFDAGEPKSRHVVPIGKLKNIRFMSIFRF 97 (777)
T ss_pred ccccceEEEeCCeEEECCEEeecCCCCceEecCCCCcccccccccccceEEeeecCCCCcceeeecccccCcEeeeeehh
Confidence 8999999999999999999999999999999998754322 5999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCCcccEEEEEecCCCCCCCCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceeccc
Q 004090 75 KLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQ 154 (774)
Q Consensus 75 k~~W~~pr~g~~~~~ip~etq~ll~e~~~~~~l~~~~~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~~sg~~~~~~~~ 154 (774)
|+|||+||+|++++|||.||||||+|.+++ .+.|+|+||+++|.|||+||++.+++++||+|||++++++++
T Consensus 98 K~WWmt~~~G~~g~dip~eTQ~ll~e~~~~--------~~~y~~~lP~~eg~fRa~Lq~~~~d~~~ic~esg~~~v~~~~ 169 (777)
T PLN02711 98 KVWWTTHWVGSNGRDVENETQMMILDKSDS--------GRPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTKVCGSE 169 (777)
T ss_pred hhhccchhhcCCCCCCChhheEEEEEccCC--------CceEEEEEeecCCceEEEecCCCCCcEEEEEecCCcceeccc
Confidence 999999999999999999999999999852 136999999999999999999999999999999999999999
Q ss_pred cceEEEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEE
Q 004090 155 GLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFL 234 (774)
Q Consensus 155 ~~~~v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~v 234 (774)
+.++|||++|+|||++|++|++++++|++||++|++|++|.++|+||||||||||++|||++|++++++|+++|+|++||
T Consensus 170 ~~~~~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~v 249 (777)
T PLN02711 170 FRSVLYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLV 249 (777)
T ss_pred cceEEEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceEEehhHhcccCCHHHHHHHHHHHHhCCCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccccccCCCC----cccchhhccccccccccCCCccCCccccccc-CCCCCCChHHHHHHHHhcCC-CcEEEEEee
Q 004090 235 IIDDGWQQIENKPK----EESNCIVQEGAQFASRLTGIKENSKFQKKCQ-NSEQVSGLKHVVDESKQNHN-VKYVYVWHA 308 (774)
Q Consensus 235 IIDDGWQ~~~~~~~----~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~-~~~~~~GLk~~v~~Ik~~~G-lk~vgvWha 308 (774)
|||||||+++++.+ .++++...+|+||.+||.+|++|.|||+..+ +..||.|||++|+.||++|+ |||||||||
T Consensus 250 IIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~~~~~~p~Glk~~v~~iK~~~~~vk~VyVWHA 329 (777)
T PLN02711 250 LIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPKSLSNKGMGAFIRDLKEEFKTVDYVYVWHA 329 (777)
T ss_pred EEcCCcccccccCcccccccccccccccchhhhhhccccccccccccccccCCCCCcHHHHHHHHHhhCCCCCEEEEeee
Confidence 99999999877632 2345778889999999999999999996432 45789999999999999985 999999999
Q ss_pred cccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccc
Q 004090 309 LAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQ 388 (774)
Q Consensus 309 l~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q 388 (774)
|+||||||+|++++|+ ++++++|+.+||+..++|++++|++..+|+++++|+++++|||+||+||+++||||||||+|
T Consensus 330 L~GYWGGv~P~~~~~~--~~~~~~p~~spg~~~~~~d~~~d~~~~~g~glv~Pe~~~~FY~~~hs~Las~GVDgVKVDvQ 407 (777)
T PLN02711 330 LCGYWGGLRPNVPGLP--ESKVVAPKLSPGLKMTMEDLAVDKIVNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKVDVI 407 (777)
T ss_pred ccCcccCcCCCCCCCc--cceeeccccCcccccccccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEchh
Confidence 9999999999998876 66788999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccc-cccccEEEecCCCCCCCccchh-------
Q 004090 389 NIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYS-SKQTAVIRASDDYYPRDPASHT------- 460 (774)
Q Consensus 389 ~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~-~~~~~~~R~SdDf~p~~p~~~~------- 460 (774)
+.|+++++++++|++++++||+||++|++|||+++++|+||||+++++|+ ++++++.|+||||||++|++|+
T Consensus 408 ~~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~ng~I~CMs~~~d~~~~~tk~~av~R~SDDF~p~dP~sh~~g~~W~~ 487 (777)
T PLN02711 408 HLLEMLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQ 487 (777)
T ss_pred hhHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCcccceeeecccccCCCCccccccccccc
Confidence 99999998999999999999999999999999999999999999998885 6788999999999999999998
Q ss_pred -hHHHHHHhhhhhccCCCCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHhhhhcCCCCceeecCCCCCCC
Q 004090 461 -IHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT 539 (774)
Q Consensus 461 -~hi~~na~nsl~~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~lv~pdG~ilr~~~pg~pt 539 (774)
.||++|||||||||+++|||||||||.||+|+|||++||||||||||||+||+|||+||||||+|||+||||++||+||
T Consensus 488 ~~Hi~~~AyNSLllg~~v~PDWDMF~S~Hp~A~~HAaaRAisGGPIYVSD~pG~Hdf~LLk~LvlpdGsIlR~~~pg~Pt 567 (777)
T PLN02711 488 GCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVGKHNFPLLKRLVLPDGSILRCQYYALPT 567 (777)
T ss_pred cceeeeehhhhhhhcccccCCchhhhccCchHHHHHHHHhhcCCCEEEecCCCCccHHHHHhhhCCCCcEecccCCCCcc
Confidence 4999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcCCCCcceEEEEeecCCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCC--CCCc
Q 004090 540 RDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAG--WNGD 617 (774)
Q Consensus 540 ~d~lf~dp~~d~~~lLki~n~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~--~~~~ 617 (774)
|||||.||++|++++|||||+|+++||||+|||||++||+++++|++|+++++++|+.|+++||+|....++.. -.+.
T Consensus 568 rDcLF~DP~~dg~slLKIwn~nk~tGviG~FNcqgagW~~~~~~~~~~~~~~~~vt~~v~~~Dv~w~~~~~~~~~~~~~~ 647 (777)
T PLN02711 568 RDCLFEDPLHDGKTMLKIWNLNKFTGVIGAFNCQGGGWCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIEGVQV 647 (777)
T ss_pred chhhccccccCCceEEEEEeecCCcceEEEEEecCCcccchhhhcccccCCCCceEEEEchHHhcccCCCCCcCccCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999998764433222 2578
Q ss_pred EEEEEeccceEEecCCCCeeeEEecCCcEEEEEEeeeeeecC-ceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCC
Q 004090 618 AIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISS-NISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGE 696 (774)
Q Consensus 618 ~~vy~~~sg~~~~l~~~~~~~v~L~~~~~ei~t~~Pv~~~~~-~~~~A~iGL~~k~~~~~av~~~~~~~~~~~~~~~~~~ 696 (774)
|+||+|++|++.++++++.++|+|++++|||||+|||+.+.+ +++||||||+||||++|||+++++..
T Consensus 648 y~vy~~~s~~l~~l~~~~~l~vtL~~~~~Eiftv~Pv~~~~~~~~~fApIGL~~m~nsggAv~~~~~~~----------- 716 (777)
T PLN02711 648 FAVYLFQSKKLVLSKPSENLEISLEPFNFELITVSPVTTLPGKSIQFAPIGLVNMLNTGGAIQSLAYDD----------- 716 (777)
T ss_pred EEEEEecCCeEEECCCCCceEEEecCcceEEEEEeeeEEecCCCceEEecchhhhccCceeEEEEEecc-----------
Confidence 999999999999999999999999999999999999999976 49999999999999999999998863
Q ss_pred cccccccccCCCCCCceEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeEEeC
Q 004090 697 VSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 774 (774)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~i~~ 774 (774)
+++ +++|+|||||+||+|||++|++|.|||++++|+|++ |||||+||||+++ ++|.|||+|
T Consensus 717 ------------~~~--~v~v~vkg~G~lg~YsS~~P~~c~v~~~~~~f~y~~--g~~~~~~~~~~~~-~~~~v~~~~ 777 (777)
T PLN02711 717 ------------AES--SVQIGVKGSGEMRVFASEKPRSCKIDGEEVEFGYED--CMVVVQVPWSGSS-GLSLIEYLF 777 (777)
T ss_pred ------------CCC--eEEEEEEeeeEEEEEecCCCeEEEECCEEeeeEecC--CEEEEEecCCCcC-CceeEEEeC
Confidence 122 588999999999999999999999999999999998 9999999999955 999999986
No 6
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=100.00 E-value=1.3e-202 Score=1725.25 Aligned_cols=719 Identities=61% Similarity=1.089 Sum_probs=688.1
Q ss_pred eEeeCCeEEEeCeeeecCCCCCeEEeecCCC--------CcccceeeecccCCCCcceeeeCCCccCceeEEEeeecccc
Q 004090 7 ISISDGNLVVHGKTILTGVPDNIILTPGNGV--------GLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWW 78 (774)
Q Consensus 7 ~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~lg~~~~~r~~~l~r~k~~W 78 (774)
|+|+||+|+|+|+++|++||+||+++|.++. ..+.|+|+|+++.+++|||+++||++++.|||||||||+||
T Consensus 1 ~~~~~~~l~v~g~~~l~~vp~nv~~~~~~~~~~~~~~~~~~~~g~f~g~~~~~~~sr~v~~lG~l~~~rfm~~fRfK~WW 80 (747)
T PF05691_consen 1 ISLSDGNLVVNGRPILTGVPDNVTLTPASGSDAPPPVFAGAVDGAFLGFTADEPSSRHVFSLGKLRGRRFMSLFRFKLWW 80 (747)
T ss_pred CEecCCeeEECCEEeecCCCcceEeccCccccccccccccCCCceEEcccCCCCCcceeEecccccCceeeehhhhhhhc
Confidence 6899999999999999999999999998865 56789999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccEEEEEecCCCCCCCCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceeccccceE
Q 004090 79 MTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYL 158 (774)
Q Consensus 79 ~~pr~g~~~~~ip~etq~ll~e~~~~~~l~~~~~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~~sg~~~~~~~~~~~~ 158 (774)
|+||+|++++|||.||||||+|.+++++ +...|+|+|||++|+|||+||++++++++||+|||++.+.++++..+
T Consensus 81 m~p~~G~~g~dip~eTQ~ll~e~~~~~~-----~~~~Y~vlLPl~eg~FRa~Lqg~~~~~l~i~veSg~~~v~~s~~~~~ 155 (747)
T PF05691_consen 81 MTPRMGTSGRDIPMETQFLLLESPDDSD-----EGAPYVVLLPLLEGSFRASLQGGEDDELEICVESGDPAVQTSSFDHA 155 (747)
T ss_pred cccccCCCcccCChhhheeeeecCcccC-----CccceEEEEEEecCceeeeeccCCCCcEEEEEecCCCccccccCceE
Confidence 9999999999999999999999995331 23489999999999999999999999999999999999999999999
Q ss_pred EEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEec
Q 004090 159 VYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDD 238 (774)
Q Consensus 159 v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDD 238 (774)
|||++|+|||++|++|++++++|++||++|++|++|.++|+||||||||||++||+++|++++++|+++|+|++||||||
T Consensus 156 l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viIDD 235 (747)
T PF05691_consen 156 LYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIIDD 235 (747)
T ss_pred EEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCC---cccchhhccccccccccCCCccCCccccccc---CCCCCCChHHHHHHHHhcC-CCcEEEEEeeccc
Q 004090 239 GWQQIENKPK---EESNCIVQEGAQFASRLTGIKENSKFQKKCQ---NSEQVSGLKHVVDESKQNH-NVKYVYVWHALAG 311 (774)
Q Consensus 239 GWQ~~~~~~~---~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~---~~~~~~GLk~~v~~Ik~~~-Glk~vgvWhal~G 311 (774)
|||+++++.+ ++..+...+|.||.+||.+|++|.||.+... ++.+|.|||++|++||++| |||||||||||+|
T Consensus 236 GWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~kF~~~~~~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~G 315 (747)
T PF05691_consen 236 GWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSKFRAYKSGKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALCG 315 (747)
T ss_pred chhcccccCcccccccccccccccccchhhhhhhhhhhhhhccCCCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhcc
Confidence 9999998855 2446778899999999999999999995442 4678999999999999999 8999999999999
Q ss_pred ccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccch
Q 004090 312 YWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNII 391 (774)
Q Consensus 312 YWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l 391 (774)
|||||+|++ +.+|+.++++|+.+||+..++|+++++++..+|+++++|+++++|||+||+||+++||||||||+|+.+
T Consensus 316 YWgGi~P~~--~~~~~~k~~~~~~spg~~~~~~d~~~d~~~~~g~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~l 393 (747)
T PF05691_consen 316 YWGGISPDG--MLAYNYKLVYPKLSPGLQGNMPDLAVDSIVKGGLGLVDPEDAFRFYDDFHSYLASAGVDGVKVDVQAIL 393 (747)
T ss_pred eecCcCCCC--ccccccceeecccCCcccccCccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhh
Confidence 999999975 557899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccc-cccccEEEecCCCCCCCccc--------hhhH
Q 004090 392 ETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYS-SKQTAVIRASDDYYPRDPAS--------HTIH 462 (774)
Q Consensus 392 ~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~-~~~~~~~R~SdDf~p~~p~~--------~~~h 462 (774)
++++.++++|++++++||+||++|+++||+++++|+||||+++++|+ .+.++++|+||||||++|++ |++|
T Consensus 394 ~~l~~~~ggrv~la~ay~~AL~~S~~r~F~~~~vI~CMsh~~~~l~~~~~~~av~R~SDDF~P~~p~s~p~g~~w~h~~H 473 (747)
T PF05691_consen 394 ETLGEGYGGRVELARAYQDALEASVARHFSGNGVINCMSHNPDNLYHSTKQSAVVRNSDDFFPRDPASDPNGVFWLHTWH 473 (747)
T ss_pred hhhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCccchhcccccccceeccccccCCCCCCCccccchhhHHH
Confidence 99999999999999999999999999999999999999999999999 78889999999999999999 9999
Q ss_pred HHHHHhhhhhccCCCCCCCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHhhhhcCCCCceeecCCCCCCCccc
Q 004090 463 ISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDC 542 (774)
Q Consensus 463 i~~na~nsl~~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~lv~pdG~ilr~~~pg~pt~d~ 542 (774)
|++||||+|||++++|||||||||.||+|+|||++||||||||||||+||+||++|||||++|||+||||++||+|||||
T Consensus 474 i~~nAyNsL~~g~~~~PDwDMF~S~h~~A~~HAaaRaiSGGPVYiSD~pG~hd~~LLk~LvlpDG~ilR~~~pg~Pt~d~ 553 (747)
T PF05691_consen 474 IAHNAYNSLLLGQFVWPDWDMFQSSHPAAEFHAAARAISGGPVYISDKPGKHDFDLLKKLVLPDGSILRADHPGRPTRDC 553 (747)
T ss_pred HHHHHHHHHHHHhhcCCCcccccccCccHHHHHHHHhhcCCCEEEeeCCCCCCHHHHHHhhCCCCceeccccCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcCCCCcceEEEEeecCCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhC--CCCCCcEEE
Q 004090 543 LFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAG--AGWNGDAIV 620 (774)
Q Consensus 543 lf~dp~~d~~~lLki~n~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~--~~~~~~~~v 620 (774)
||.||++|++++|||||+|+++||||+|||||++||++++++++|+++++++|+.|+++||+++.++++ .+|+++|+|
T Consensus 554 Lf~dp~~d~~~lLKi~n~n~~~gvig~FN~qgagw~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~av 633 (747)
T PF05691_consen 554 LFEDPLRDGKSLLKIWNLNKFTGVIGVFNCQGAGWCREERKNKSHDECPGTLTGSVRPSDVEWISEVAGADDGWNGDFAV 633 (747)
T ss_pred hcccCCCCCceeEEEEecCCccceEEEEecCCCcccchhhhccccCCCCcceEeeccccccceeccccccCcCCCccEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999998887 569999999
Q ss_pred EEeccceEEecC-CCCeeeEEecCCcEEEEEEeeeeeecC-ceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCcc
Q 004090 621 YAHRSGEVVRLP-KGASVPVTLKVLEYELFHFCPLKEISS-NISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVS 698 (774)
Q Consensus 621 y~~~sg~~~~l~-~~~~~~v~L~~~~~ei~t~~Pv~~~~~-~~~~A~iGL~~k~~~~~av~~~~~~~~~~~~~~~~~~~~ 698 (774)
|+|+++++.+|+ ++++++|+|++++|||||++||+.+.+ +++||||||+||||+||||+++++..
T Consensus 634 Y~~~~~~l~~l~~k~~~~~vtL~~~~~El~tv~Pv~~~~~~~v~FAPIGL~nMfNsGGAV~~~~~~~------------- 700 (747)
T PF05691_consen 634 YSHRSGELVLLPPKSESLPVTLKPLEFELFTVSPVKVLGGKGVSFAPIGLVNMFNSGGAVQELEYDD------------- 700 (747)
T ss_pred EEcCCCeEEEecCCCCCceEEEcCcceEEEEEeeEEEecCCCeeEehhhHHHhhcCCceeEEEEEec-------------
Confidence 999999999999 599999999999999999999999987 89999999999999999999998873
Q ss_pred cccccccCCCCCCceEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEc
Q 004090 699 SELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTL 758 (774)
Q Consensus 699 ~~~~~~~~~~~~~~~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l 758 (774)
....|+|+|||||+||+|||++|++|.|||+||+|+||++ |||||++
T Consensus 701 ------------~~~~v~i~vrG~G~f~aYsS~~P~~c~vdg~ev~F~yd~~-gllt~~v 747 (747)
T PF05691_consen 701 ------------DEASVKIKVRGCGRFGAYSSARPKKCRVDGAEVEFSYDED-GLLTVDV 747 (747)
T ss_pred ------------CccEEEEEEEeccceeEEEecCceEEEECCEEeeEEEcCC-ceEEEeC
Confidence 2457999999999999999999999999999999999998 9999985
No 7
>PLN02229 alpha-galactosidase
Probab=100.00 E-value=2e-37 Score=342.40 Aligned_cols=338 Identities=19% Similarity=0.240 Sum_probs=226.1
Q ss_pred cccccccccccccccCCHHHHHHHHHHHHhCCCC---CcEEEEecccccccCCCCcccchhhccccccccccCCCccC-C
Q 004090 197 LDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-S 272 (774)
Q Consensus 197 ~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~ 272 (774)
..+|||||||+|++++||+.|++.++.|.+.|+. ++||+||||||...++. .+++.+| .
T Consensus 62 tPpmGWnSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~-----------------~G~l~~d~~ 124 (427)
T PLN02229 62 TPQMGWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDS-----------------KGQLVPDPK 124 (427)
T ss_pred CCCceEEchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCC-----------------CCCEEEChh
Confidence 3469999999999999999999999997655555 56999999999876653 2456665 6
Q ss_pred cccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccc
Q 004090 273 KFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA 352 (774)
Q Consensus 273 KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~ 352 (774)
||| +|||+++++||+ .||| +|+|... |+ .+|- ..||+.+++
T Consensus 125 rFP---------~G~k~ladyiH~-~GlK-fGIy~d~-----G~----------~TC~----~~pGS~g~e--------- 165 (427)
T PLN02229 125 TFP---------SGIKLLADYVHS-KGLK-LGIYSDA-----GV----------FTCQ----VRPGSLFHE--------- 165 (427)
T ss_pred hcC---------CcHHHHHHHHHH-CCCc-eEEeccC-----CC----------cccC----CCCCCccHH---------
Confidence 788 899999999999 6999 7776432 22 1221 124543322
Q ss_pred cccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCC
Q 004090 353 VHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHN 432 (774)
Q Consensus 353 ~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~ 432 (774)
..||+. +|+|||||||+|+|+... . ...+..+++++||.+ .||+|++|+|+|
T Consensus 166 --------~~DA~~--------fA~WGVDylK~D~C~~~~-----~-~~~~~y~~m~~AL~~------tGRpI~~SlC~W 217 (427)
T PLN02229 166 --------VDDADI--------FASWGVDYLKYDNCYNLG-----I-KPIERYPPMRDALNA------TGRSIFYSLCEW 217 (427)
T ss_pred --------HHHHHH--------HHHcCCCEEEecCCCCCC-----c-chhHHHHHHHHHHHh------hCCCcEEEecCC
Confidence 245554 599999999999997421 1 011223445555554 489999999998
Q ss_pred CCC---ccccccccEEEecCCCCCCCccchhhHHHHHHhhhhhccCCCCCCCccccCCC-----hhHHHHHHHHHhcCCc
Q 004090 433 TDG---IYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH-----PAAEYHGAARAVGGCA 504 (774)
Q Consensus 433 ~~~---l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~PDwDMf~s~h-----~~a~~HaaaraisGgP 504 (774)
+.. .|..+.+|+||+|+|+++.|....++. -.++..+.+.+++.|||+||+..++ .+.+.|+++|||.++|
T Consensus 218 G~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~i~-~~~~~~~~~agPG~wnDpDML~vGn~glT~~E~rthfsLWai~~SP 296 (427)
T PLN02229 218 GVDDPALWAGKVGNSWRTTDDINDTWASMTTIA-DLNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAP 296 (427)
T ss_pred CCCCHHHHHHhhcCeeeccCCcccccccHHHHH-HHHHHHHhhcCCCCCCCCCeeeeCCCCCCHHHHHHHHHHHHHHhCc
Confidence 642 366678999999999999998754432 2344455678999999999999987 5789999999999999
Q ss_pred EEeecCCCCC---cHHHhh-h-hc--CCC--CceeecCCCCCCCccccccCcCCCCcceEEEEee--cCCcceeEEEeec
Q 004090 505 IYVSDKPGNH---NFDLLR-K-LV--LPD--GSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNV--NKCSGVVGVFNCQ 573 (774)
Q Consensus 505 vyiSD~pg~h---d~~lL~-~-lv--~pd--G~ilr~~~pg~pt~d~lf~dp~~d~~~lLki~n~--~~~~gvlg~FN~~ 573 (774)
|.++....+- ..+||. + ++ .+| |. .|++. +.+. .++ -+-||.. ..++-+|++||..
T Consensus 297 LiiG~DL~~m~~~tl~ILtNkEVIAINQD~lG~------qg~~v----~~~~-~~~--~~~vW~~~L~~g~~aValfN~~ 363 (427)
T PLN02229 297 LLIGCDVRNMTAETMEILSNKEVIAVNQDPLGV------QGRKI----QANG-KNG--CQQVWAGPLSGDRLVVALWNRC 363 (427)
T ss_pred eeecCCcccCCHHHHHHhcCHHHHhhccccccc------CcEEE----EecC-CCC--ceEEEEEECCCCCEEEEEEeCC
Confidence 9999554444 455554 2 32 255 42 23332 1111 111 2445554 3445589999955
Q ss_pred CCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCCCeeeEEecCCcEEEEEEee
Q 004090 574 GAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCP 653 (774)
Q Consensus 574 g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~vy~~~sg~~~~l~~~~~~~v~L~~~~~ei~t~~P 653 (774)
.. + .+-.+..+|+. +. + ...|-|+.--+++-.-......+.++|++.+.-+|.+.|
T Consensus 364 ~~---------------~--~~v~v~~~~lG-l~---~---~~~~~VrDLW~~~dlg~~~~~~~~~~v~~Hg~~l~rl~~ 419 (427)
T PLN02229 364 SE---------------P--ATITASWDVIG-LE---S---SISVSVRDLWKHKDLSENVVGSFGAQVDAHDCHMYIFTP 419 (427)
T ss_pred CC---------------C--EEEEEEHHHcC-CC---C---CCceEEEECCCCCccCccccceEEEEECCCeEEEEEEec
Confidence 31 1 22223344442 10 0 123566665555421111256789999999999999999
Q ss_pred eee
Q 004090 654 LKE 656 (774)
Q Consensus 654 v~~ 656 (774)
+..
T Consensus 420 ~~~ 422 (427)
T PLN02229 420 QTV 422 (427)
T ss_pred ccc
Confidence 774
No 8
>PLN02692 alpha-galactosidase
Probab=100.00 E-value=1.3e-37 Score=342.57 Aligned_cols=334 Identities=17% Similarity=0.240 Sum_probs=227.5
Q ss_pred cccccccccccccccCCHHHHHHHHHHHHhCCCC---CcEEEEecccccccCCCCcccchhhccccccccccCCCcc-CC
Q 004090 197 LDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-NS 272 (774)
Q Consensus 197 ~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n~ 272 (774)
..+|||||||+|++++||+.|++.++.+.+.|+. ++||+||||||...++.. ++|.+ +.
T Consensus 55 tPpmGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~-----------------G~~~~d~~ 117 (412)
T PLN02692 55 TPPMGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEK-----------------GNLVPKKS 117 (412)
T ss_pred CCcceEEchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCC-----------------CCeeeChh
Confidence 3469999999999999999999999998877776 579999999998877643 33454 47
Q ss_pred cccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccc
Q 004090 273 KFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA 352 (774)
Q Consensus 273 KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~ 352 (774)
||| +|||+++++||+ .||| +|+|... | .+.|..- .||
T Consensus 118 kFP---------~G~k~ladyiH~-~GLK-fGIy~d~-----G---------~~tC~~~----~pG-------------- 154 (412)
T PLN02692 118 TFP---------SGIKALADYVHS-KGLK-LGIYSDA-----G---------YFTCSKT----MPG-------------- 154 (412)
T ss_pred hcC---------CcHHHHHHHHHH-CCCc-eEEEecC-----C---------ccccCCC----CCC--------------
Confidence 888 899999999999 6999 7877531 1 1122110 122
Q ss_pred cccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCC
Q 004090 353 VHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHN 432 (774)
Q Consensus 353 ~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~ 432 (774)
.+.||+...+++|+|||||||+|+|+.- +. . ...-+.+|.+++++ .||+|++|+|++
T Consensus 155 -----------S~g~e~~DA~~fA~WGvDylK~D~C~~~-----~~--~---~~~~y~~m~~AL~~--tGRpI~~SlC~w 211 (412)
T PLN02692 155 -----------SLGHEEQDAKTFASWGIDYLKYDNCNND-----GS--K---PTVRYPVMTRALMK--AGRPIFFSLCEW 211 (412)
T ss_pred -----------chHHHHHHHHHHHhcCCCEEeccccCCC-----Cc--c---hhHHHHHHHHHHHH--hCCCeEEEecCC
Confidence 3456676777789999999999999731 11 1 11223444444444 489999999998
Q ss_pred CCC---ccccccccEEEecCCCCCCCccchhhHHHHHHhhhhhccCCCCCCCccccCCC-----hhHHHHHHHHHhcCCc
Q 004090 433 TDG---IYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH-----PAAEYHGAARAVGGCA 504 (774)
Q Consensus 433 ~~~---l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~PDwDMf~s~h-----~~a~~HaaaraisGgP 504 (774)
+.. .|..+.+|+||+|+|+++.|...... +-.++..+.+++++.|||+||+..++ .+.+.|+++|||+++|
T Consensus 212 g~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~-~~~~~~~~~~agPG~wnDpDML~VGn~glT~~E~rThfsLWai~~SP 290 (412)
T PLN02692 212 GDMHPALWGSKVGNSWRTTNDISDTWDSMISR-ADMNEVYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAP 290 (412)
T ss_pred CcCChhhhhhhcCCccccccccccchHhHHHH-HHHHHHHhhccCCCCCCCCCeEeECCCCCCHHHHHHHHHHHHHHhCc
Confidence 742 35678899999999999999865543 23445556678999999999999987 4789999999999999
Q ss_pred EEeecCCCC---CcHHHhh-h-hc--CCC--CceeecCCCCCCCccccccCcCCCCcceEEEEee--cCCcceeEEEeec
Q 004090 505 IYVSDKPGN---HNFDLLR-K-LV--LPD--GSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNV--NKCSGVVGVFNCQ 573 (774)
Q Consensus 505 vyiSD~pg~---hd~~lL~-~-lv--~pd--G~ilr~~~pg~pt~d~lf~dp~~d~~~lLki~n~--~~~~gvlg~FN~~ 573 (774)
|.++....+ ...+||. + ++ .+| |. +|++.. .++. +-||.. ..+.-+|++||..
T Consensus 291 LiiG~DL~~~~~~~l~iLtN~evIAiNQD~lG~------q~~~v~--------~~~~--~~vW~k~l~~g~~aVal~N~~ 354 (412)
T PLN02692 291 LLLGCDVRNMTKETMDIVANKEVIAVNQDPLGV------QAKKVR--------MEGD--LEIWAGPLSGYRVALLLLNRG 354 (412)
T ss_pred ceecCCcccCCHHHHHHhcCHHHhhhccCcccc------CcEEEE--------ecCC--eEEEEEECCCCCEEEEEEECC
Confidence 999965444 4455554 2 32 255 32 122210 1222 345554 3455689999954
Q ss_pred CCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCCCeeeEEecCCcEEEEEEee
Q 004090 574 GAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCP 653 (774)
Q Consensus 574 g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~vy~~~sg~~~~l~~~~~~~v~L~~~~~ei~t~~P 653 (774)
... .+-.+..+|+. +. + ...|-|+.--+++-.-......++++|++.+.-+|.+.|
T Consensus 355 ~~~-----------------~~i~~~~~~lg-l~---~---~~~~~vrDLW~~~~~g~~~~~~~~~~v~~Hg~~l~rl~~ 410 (412)
T PLN02692 355 PWR-----------------NSITANWDDIG-IP---A---NSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYILKP 410 (412)
T ss_pred CCC-----------------EEEEEeHHHhC-CC---C---CCceEEEECCCCCccCccccceEEEEECCceEEEEEEec
Confidence 311 22223334442 10 0 124556665555422112256788999999999999988
Q ss_pred e
Q 004090 654 L 654 (774)
Q Consensus 654 v 654 (774)
+
T Consensus 411 ~ 411 (412)
T PLN02692 411 I 411 (412)
T ss_pred C
Confidence 5
No 9
>PLN02808 alpha-galactosidase
Probab=100.00 E-value=1.1e-36 Score=334.49 Aligned_cols=331 Identities=17% Similarity=0.284 Sum_probs=226.2
Q ss_pred cccccccccccccccCCHHHHHHHHHHHHhCCCC---CcEEEEecccccccCCCCcccchhhccccccccccCCCccC-C
Q 004090 197 LDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-S 272 (774)
Q Consensus 197 ~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~ 272 (774)
..+|||||||+|++++||+.|++.++.|++.|+. ++||+||||||...++.. +++.+| .
T Consensus 31 tPpmGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~-----------------G~~~~d~~ 93 (386)
T PLN02808 31 TPQMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQ-----------------GNLVPKAS 93 (386)
T ss_pred CCcceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCC-----------------CCEeeChh
Confidence 3469999999999999999999999998777777 679999999998766533 344555 6
Q ss_pred cccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccc
Q 004090 273 KFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA 352 (774)
Q Consensus 273 KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~ 352 (774)
||| +|||+++++||+ .||| +|+|... | ..+|.. ..||+
T Consensus 94 rFP---------~G~~~lad~iH~-~Glk-fGiy~~~-----G----------~~tC~~---~~pGs------------- 131 (386)
T PLN02808 94 TFP---------SGIKALADYVHS-KGLK-LGIYSDA-----G----------TLTCSK---TMPGS------------- 131 (386)
T ss_pred hcC---------ccHHHHHHHHHH-CCCc-eEEEecC-----C----------ccccCC---CCCcc-------------
Confidence 888 899999999999 6999 7887542 1 122210 01332
Q ss_pred cccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCC
Q 004090 353 VHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHN 432 (774)
Q Consensus 353 ~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~ 432 (774)
+.||+...+.+|+|||||||+|+|+.- +. . .+.-+.+|.+++++ .||+|++++|.|
T Consensus 132 ------------~~~e~~DA~~fA~WGvDylK~D~C~~~-----~~-~----~~~~y~~m~~AL~~--tGRpi~~slc~w 187 (386)
T PLN02808 132 ------------LGHEEQDAKTFASWGIDYLKYDNCENT-----GT-S----PQERYPKMSKALLN--SGRPIFFSLCEW 187 (386)
T ss_pred ------------hHHHHHHHHHHHHhCCCEEeecCcCCC-----Cc-c----HHHHHHHHHHHHHH--hCCCeEEEecCC
Confidence 346666666779999999999999731 11 1 12233444444444 489999999998
Q ss_pred C-CCc--cccccccEEEecCCCCCCCccchhhHHHHHHhhhhhccCCCCCCCccccCCC-----hhHHHHHHHHHhcCCc
Q 004090 433 T-DGI--YSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH-----PAAEYHGAARAVGGCA 504 (774)
Q Consensus 433 ~-~~l--~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~PDwDMf~s~h-----~~a~~HaaaraisGgP 504 (774)
+ +.. |..+.+|+||+|+|+++.|....+. +-.++..+.+++++.|+|+||+..++ .+.+.|+++|||+++|
T Consensus 188 g~~~p~~w~~~~~n~WR~s~Di~d~W~~v~~~-~~~~~~~~~~agPG~wnDpDML~vGn~glt~~E~rthfsLWam~~SP 266 (386)
T PLN02808 188 GQEDPATWAGDIGNSWRTTGDIQDNWDSMTSR-ADQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALAKAP 266 (386)
T ss_pred CCCCHHHHHHhhcCcccccCCcccchhhHHHH-HHhhhhhHhhcCCCCCCCCCeeeECCCCCCHHHHHHHHHHHHHHhCc
Confidence 6 222 5567899999999999999865443 33444555678899999999999886 5789999999999999
Q ss_pred EEeecCCC---CCcHHHhh-h-hc--CCC--CceeecCCCCCCCccccccCcCCCCcceEEEEe--ecCCcceeEEEeec
Q 004090 505 IYVSDKPG---NHNFDLLR-K-LV--LPD--GSVLRAQLPGRPTRDCLFADPARDGTSLLKVWN--VNKCSGVVGVFNCQ 573 (774)
Q Consensus 505 vyiSD~pg---~hd~~lL~-~-lv--~pd--G~ilr~~~pg~pt~d~lf~dp~~d~~~lLki~n--~~~~~gvlg~FN~~ 573 (774)
|.||+..- +...+||+ + ++ -+| |. +|++.. .++. +-||. +.++.-+|++||..
T Consensus 267 LiiG~DL~~~~~~~l~iLtNkevIAINQD~lG~------~~~~v~--------~~~~--~~vW~k~L~~g~~aVal~N~~ 330 (386)
T PLN02808 267 LLIGCDIRSMDNETFELLSNKEVIAVNQDKLGV------QGKKVK--------KDGD--LEVWAGPLSKKRVAVVLWNRG 330 (386)
T ss_pred ceecCCcCcCCHHHHHHhcCHHHHhhcCCcccc------CcEEEE--------ecCC--eEEEEEECCCCCEEEEEEECC
Confidence 99996654 44466665 3 33 256 42 222221 1222 34444 34566789999955
Q ss_pred CCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceE-EecCCCCeeeEEecCCcEEEEEEe
Q 004090 574 GAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEV-VRLPKGASVPVTLKVLEYELFHFC 652 (774)
Q Consensus 574 g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~vy~~~sg~~-~~l~~~~~~~v~L~~~~~ei~t~~ 652 (774)
.. +.+++ +..+|+. +. + .+.|-|+.--+++- ... ...++++|++.+.-+|.+.
T Consensus 331 ~~---------------~~~~~--~~~~~lg-l~---~---~~~~~vrDlWs~~~~g~~--~~~~~~~v~pHg~~~~rlt 384 (386)
T PLN02808 331 SS---------------RATIT--ARWSDIG-LN---S---SAVVNARDLWAHSTQSSV--KGQLSALVESHACKMYVLT 384 (386)
T ss_pred CC---------------CEEEE--EEHHHhC-CC---C---CCceEEEECCCCCccCcc--cceEEEEECCceEEEEEEe
Confidence 31 11233 3344442 10 0 13466666555542 222 3568899999999999887
Q ss_pred e
Q 004090 653 P 653 (774)
Q Consensus 653 P 653 (774)
|
T Consensus 385 ~ 385 (386)
T PLN02808 385 P 385 (386)
T ss_pred C
Confidence 6
No 10
>PLN03231 putative alpha-galactosidase; Provisional
Probab=100.00 E-value=8.1e-35 Score=316.49 Aligned_cols=288 Identities=14% Similarity=0.135 Sum_probs=184.7
Q ss_pred cccccccccccccCCHHHHHHHHHHHHhCCCC---CcEEEEecccccccCCCCcccchhhccccccccccCCCccC-Ccc
Q 004090 199 WFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKF 274 (774)
Q Consensus 199 ~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KF 274 (774)
+|||+|||+|+++|||+.|+++++ +.+.|+. ++||+|||||+...+..... ......+.......+++.++ .||
T Consensus 2 pMGWNSWn~f~~~i~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~-~~~~~~~~~~~d~~G~l~pd~~rF 79 (357)
T PLN03231 2 PRGWNSYDSFSFTISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFK-TSAKSPGYDLIDKWGRPLPDPKRW 79 (357)
T ss_pred CCCccchhccCcCcCHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccc-cccccccccccCCCCCcccCcccC
Confidence 699999999999999999999999 5666665 46999999999764211000 00000000000112445554 788
Q ss_pred cccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCccccccccccccc-CCCCCCCCCC---Ccceecc
Q 004090 275 QKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYP-VTSPGVMGNQ---PDIVMDS 350 (774)
Q Consensus 275 p~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p-~~spg~~~~~---pd~~~~~ 350 (774)
|++ +..+|||+++++||+ .||| +|+... . |+..-+ .... +| ..+||+.+++ .|++...
T Consensus 80 Ps~----~~~~G~k~lADyvHs-~GLK-fGIY~~-~----G~~tca-~~~~------~pi~G~~Gs~g~~~~a~Dia~~~ 141 (357)
T PLN03231 80 PST----TGGKGFAPIAAKVHA-LGLK-LGIHVM-R----GISTTA-VKKK------TPILGAFKSNGHAWNAKDIALMD 141 (357)
T ss_pred CCC----ccccCcHHHHHHHHh-CCcc-eEEEec-C----Cccchh-cccC------CccCCCCcccccccchhhhcccc
Confidence 843 234599999999999 6999 777433 2 332211 1000 11 2345554432 2222111
Q ss_pred cc-------cccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCC
Q 004090 351 LA-------VHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDN 423 (774)
Q Consensus 351 ~~-------~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~ 423 (774)
.. ..|++ ++...++.||+.+.+.+|+|||||||+|+|..- . ....+..+++++||.+ .||
T Consensus 142 ~~c~~~~~~~~~v~-~~~~gaq~y~~~~a~~fA~WGVDylK~D~c~~~-----~-~~~~~~y~~m~~AL~~------tGR 208 (357)
T PLN03231 142 QACPWMQQCFVGVN-TSSEGGKLFIQSLYDQYASWGIDFIKHDCVFGA-----E-NPQLDEILTVSKAIRN------SGR 208 (357)
T ss_pred cccccccccccccc-ccchhHHHHHHHHHHHHHHhCCCEEeecccCCC-----C-cccHHHHHHHHHHHHH------hCC
Confidence 10 11333 245689999999999999999999999987521 1 1112234455555554 489
Q ss_pred cEEeeccCCCCCc--cc---cccccEEEecCCCCCCCccchhhHHHHHHhhh-------hhccCCCCCCCccccCCC---
Q 004090 424 GCISCMCHNTDGI--YS---SKQTAVIRASDDYYPRDPASHTIHISSVAYNT-------LFLGEFMQPDWDMFHSLH--- 488 (774)
Q Consensus 424 ~iI~cMs~~~~~l--~~---~~~~~~~R~SdDf~p~~p~~~~~hi~~na~ns-------l~~g~~~~PDwDMf~s~h--- 488 (774)
+|++|+|++.... |. .+.+|+||+|+|+++.|.....+.-..+.+.. -+.|++.|||+||+..++
T Consensus 209 pIv~Slc~g~~~~~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~~~~~~~~~~~~~~~agpG~WnD~DML~vG~~g~ 288 (357)
T PLN03231 209 PMIYSLSPGDGATPGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKSWVDLDMLPFGRLTD 288 (357)
T ss_pred CeEEEecCCCCCCchhhhhhhhhcCcccccCCcccchhhHHHHHHHHHHHhhhcccccccCCCCCCCCCccchhcCCCCC
Confidence 9999999864332 21 35689999999999999875443322222221 145778999999998873
Q ss_pred ---------------hhHHHHHHHHHhcCCcEEeecCCCCCcHHHh
Q 004090 489 ---------------PAAEYHGAARAVGGCAIYVSDKPGNHNFDLL 519 (774)
Q Consensus 489 ---------------~~a~~HaaaraisGgPvyiSD~pg~hd~~lL 519 (774)
.+.+.|+++|||...||+++-...+-+-+.|
T Consensus 289 ~~~~~g~~~~~glT~~E~rthfslWam~~SPLiiG~DL~~~~~~tl 334 (357)
T PLN03231 289 PAAAYGPYRNSRLSLEEKKTQMTLWAVAKSPLMFGGDLRRLDNETL 334 (357)
T ss_pred CcccccccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHH
Confidence 3789999999999999999966555553333
No 11
>PLN02899 alpha-galactosidase
Probab=100.00 E-value=3.4e-33 Score=315.64 Aligned_cols=294 Identities=15% Similarity=0.156 Sum_probs=181.5
Q ss_pred cccccccccccccccccCCHHHHHHHHHHHHhCCCC---CcEEEEecccccccCCCCcccchhhccccccccccCCCccC
Q 004090 195 SFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN 271 (774)
Q Consensus 195 ~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n 271 (774)
....+|||+|||.|+++|||+.|++.++.+ +.|+. ++||+||||||...++.. ... ..|..-....+.+.+|
T Consensus 28 A~TPPMGWNSWn~f~~~I~E~~i~~~Ad~v-s~GLk~~GY~YVnIDDcW~~~~~~g~-~~~---s~g~~~~D~~GrLvPD 102 (633)
T PLN02899 28 ASFPPRGWNSYDSFSWIVSEEEFLQNAEIV-SQRLLPFGYEYVVVDYLWYRKKVEGA-YVD---SLGFDVIDEWGRPIPD 102 (633)
T ss_pred cCCCCCCCcchhhhccCCCHHHHHHHHHHH-HcchHhhCCeEEEEcccccccccccc-ccc---cccccccCCCCCCccC
Confidence 345679999999999999999999999954 44555 469999999997543211 000 0000000113445655
Q ss_pred -CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCC-----CcccccccccccccCCCCCCCCCCCc
Q 004090 272 -SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPA-----ADGMEHYDTALAYPVTSPGVMGNQPD 345 (774)
Q Consensus 272 -~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~-----~~~~~~y~~~~~~p~~spg~~~~~pd 345 (774)
.|||+. +.++|||+++++||+ +||| +|+. ...| +... .++.... +.-.|+..-++ -+..|
T Consensus 103 p~RFPSs----~~g~GmK~LADYVHs-kGLK-FGIY-~~~G----i~tcA~~~~~PI~gs~-~g~~y~~s~~~--~~a~D 168 (633)
T PLN02899 103 PGRWPSS----RGGKGFTEVAEKVHA-MGLK-FGIH-VMRG----ISTQAVNANTPILDAV-KGGAYEESGRQ--WRAKD 168 (633)
T ss_pred cccCCCC----ccCCCcHHHHHHHHh-CCcc-eEEE-ecCC----CcccccccCCcccccc-ccccccccccc--cchhh
Confidence 789953 344699999999999 7999 8884 4443 3211 0110000 00001000000 01122
Q ss_pred ceeccccc----ccC-Cc-cChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhc
Q 004090 346 IVMDSLAV----HGL-GL-VHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 419 (774)
Q Consensus 346 ~~~~~~~~----~gl-gl-v~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~ 419 (774)
++....+- .|. ++ .++..+++||+.+++.+|+|||||||+|+|+. + . ...+..+++.+||.++
T Consensus 169 Ia~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~-~----~--~~~~ey~~ms~AL~aT---- 237 (633)
T PLN02899 169 IALKERACAWMSHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFG-D----D--FDLEEITYVSEVLKEL---- 237 (633)
T ss_pred ccccccccccCCCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCC-C----C--CChHHHHHHHHHHHHh----
Confidence 22111111 111 11 23457899999999999999999999998752 1 1 1223345566666654
Q ss_pred CCCCcEEeeccCCCCCc--cc---cccccEEEecCCCCCCCccchhhHHHHHHhhh-hhc---c--CCCCCCCccccCCC
Q 004090 420 FPDNGCISCMCHNTDGI--YS---SKQTAVIRASDDYYPRDPASHTIHISSVAYNT-LFL---G--EFMQPDWDMFHSLH 488 (774)
Q Consensus 420 f~g~~iI~cMs~~~~~l--~~---~~~~~~~R~SdDf~p~~p~~~~~hi~~na~ns-l~~---g--~~~~PDwDMf~s~h 488 (774)
||+|++++|++.... |. .+++|+||+++|+++.|.......-....+.. -.. + .+.|||+||+..+.
T Consensus 238 --GRPIvySLspG~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~WNDpDML~VG~ 315 (633)
T PLN02899 238 --DRPIVYSLSPGTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDMLPLGW 315 (633)
T ss_pred --CCCeEEEecCCcccchhhhhhhhccCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCCCCcceecccC
Confidence 899999999865432 21 35689999999999999865442212222221 111 1 24799999998771
Q ss_pred ------------------hhHHHHHHHHHhcCCcEEeecCCCCCc---HHHhh
Q 004090 489 ------------------PAAEYHGAARAVGGCAIYVSDKPGNHN---FDLLR 520 (774)
Q Consensus 489 ------------------~~a~~HaaaraisGgPvyiSD~pg~hd---~~lL~ 520 (774)
.+.+.|+++|||...||+++-..-+.+ ++||.
T Consensus 316 lg~~~~n~G~~r~~~LT~dE~rThfSLWAm~aSPLiiG~DLr~md~~tl~ILT 368 (633)
T PLN02899 316 LTDPGSNVGPHRACNLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLIT 368 (633)
T ss_pred CCccccccCccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHhc
Confidence 378999999999999999996555444 55554
No 12
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=99.94 E-value=5.5e-27 Score=250.16 Aligned_cols=338 Identities=21% Similarity=0.262 Sum_probs=222.4
Q ss_pred ccccccccccccccCC----------HHHHHHHHHHHHhCCCC---CcEEEEecccccccCCCCcccchhhccccccccc
Q 004090 198 DWFGWCTWDAFYTDVT----------AEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASR 264 (774)
Q Consensus 198 d~lGWCTWdaf~~~vt----------e~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~ 264 (774)
.+|||.+|+.|.++++ |..+.+.++.|++.|.. +.||.|||+|....++.+ .|
T Consensus 33 P~MGw~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~--------------gr 98 (414)
T KOG2366|consen 33 PQMGWNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSD--------------GR 98 (414)
T ss_pred CCcccccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCc--------------cc
Confidence 4699999999999888 99999999999988766 579999999999988754 23
Q ss_pred cCCCcc-CCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCC
Q 004090 265 LTGIKE-NSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQ 343 (774)
Q Consensus 265 L~~~~~-n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~ 343 (774)
| .+ .++|| +|++++.+++|. .|+|. ||+.+. + +|.| .-+ ||++.++
T Consensus 99 L---va~~~rFP---------~Gi~~ladyvHs-~GLKl------------GiYsD~-G--~~TC-~g~----PGS~~~e 145 (414)
T KOG2366|consen 99 L---VADPSRFP---------SGIKALADYVHS-KGLKL------------GIYSDA-G--NFTC-AGY----PGSLGHE 145 (414)
T ss_pred c---ccChhhcc---------cchhhhhhchhh-cCCce------------eeeecc-C--chhh-ccC----Ccccchh
Confidence 3 34 46677 899999999999 69993 688874 4 4444 444 5655443
Q ss_pred CcceecccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCC
Q 004090 344 PDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDN 423 (774)
Q Consensus 344 pd~~~~~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~ 423 (774)
..||+.| |+|||||+|+|+|+..-. ..++.-..+.+| +++ +||
T Consensus 146 -----------------~~DA~tF--------A~WgvDylKlD~C~~~~~------~~~~~Yp~ms~a----LN~--tGr 188 (414)
T KOG2366|consen 146 -----------------ESDAKTF--------ADWGVDYLKLDGCFNNLI------TMPEGYPIMSRA----LNN--TGR 188 (414)
T ss_pred -----------------hhhhhhh--------HhhCCcEEeccccccccc------cccccchhHHHH----Hhc--cCC
Confidence 2467776 999999999999985211 112222333444 434 689
Q ss_pred cEEeeccCCCCCc---c-------ccccccEEEecCCCCCCCccchhhHHH---HHHhhhhhccCCCCCCCccccCCC--
Q 004090 424 GCISCMCHNTDGI---Y-------SSKQTAVIRASDDYYPRDPASHTIHIS---SVAYNTLFLGEFMQPDWDMFHSLH-- 488 (774)
Q Consensus 424 ~iI~cMs~~~~~l---~-------~~~~~~~~R~SdDf~p~~p~~~~~hi~---~na~nsl~~g~~~~PDwDMf~s~h-- 488 (774)
+|+++.|.|+... + -+++.|.||+.||+...|...-.+--. .+-.-+-..|++.|+|+||+.+++
T Consensus 189 pi~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~dtW~Sv~~I~d~~~~nqd~~~~~agPg~WNDpDmL~iGN~G 268 (414)
T KOG2366|consen 189 PIFYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQDTWKSVDSIIDYICWNQDRIAPLAGPGGWNDPDMLEIGNGG 268 (414)
T ss_pred ceEEEeccCcccccCccCCCcchhhhhhhccccchhhhhhHHHHHHHHHHHHhhhhhhhccccCCCCCCChhHhhcCCCC
Confidence 9999999998433 3 236789999999999988765444321 222224456889999999999986
Q ss_pred ---hhHHHHHHHHHhcCCcEEeecC---CCCCcHHHhh-hhcC---CC--CceeecCCCCCCCccccccCcCCCCcceEE
Q 004090 489 ---PAAEYHGAARAVGGCAIYVSDK---PGNHNFDLLR-KLVL---PD--GSVLRAQLPGRPTRDCLFADPARDGTSLLK 556 (774)
Q Consensus 489 ---~~a~~HaaaraisGgPvyiSD~---pg~hd~~lL~-~lv~---pd--G~ilr~~~pg~pt~d~lf~dp~~d~~~lLk 556 (774)
+++..|++.||+..+|+.+|.. ......++|. |.+. +| |..=|+- +.++. .+.
T Consensus 269 ~s~e~y~~qf~lWai~kAPLlms~Dlr~is~~~~~il~nk~~IaiNQDplgiqGr~i--------------~~e~~-~ie 333 (414)
T KOG2366|consen 269 MSYEEYKGQFALWAILKAPLLMSNDLRLISKQTKEILQNKEVIAINQDPLGIQGRKI--------------VLEGD-SIE 333 (414)
T ss_pred ccHHHHHHHHHHHHHhhchhhhccchhhcCHHHHHHhcChhheeccCCccchhheee--------------eecCC-ceE
Confidence 6789999999999999999954 3445556654 3322 33 2111111 00222 266
Q ss_pred EEeec--CCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCC
Q 004090 557 VWNVN--KCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKG 634 (774)
Q Consensus 557 i~n~~--~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~vy~~~sg~~~~l~~~ 634 (774)
||... +..-+++.+|.+..+ .|..++ .+...+.... ....|.+..--++.+..++..
T Consensus 334 vw~~pls~~~~Ava~lNr~~~~-------------~~~~It-~~~l~~~g~~-------~~~~~~~~dLw~~~~~~~~~~ 392 (414)
T KOG2366|consen 334 VWSGPLSGKSVAVAFLNRRKTG-------------IPARIT-AASLRELGLT-------NPASYTAHDLWSGVLGFLPTK 392 (414)
T ss_pred EEeeccCCceEEEEEecccCCC-------------CCcccc-HHHHhhcCCC-------CCceeEeeehhhccccccccC
Confidence 66653 233345555544211 122233 1111111100 122344444345555566678
Q ss_pred CeeeEEecCCcEEEEEEeeee
Q 004090 635 ASVPVTLKVLEYELFHFCPLK 655 (774)
Q Consensus 635 ~~~~v~L~~~~~ei~t~~Pv~ 655 (774)
+++.+.++|.+.-+|.+.|..
T Consensus 393 ~~i~~~V~phG~~l~~l~~~~ 413 (414)
T KOG2366|consen 393 DSISAQVNPHGVVLFVLHPSN 413 (414)
T ss_pred CeEEEEECCCCcEEEEEEecc
Confidence 999999999999999888764
No 13
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.93 E-value=3.3e-25 Score=246.20 Aligned_cols=247 Identities=21% Similarity=0.251 Sum_probs=160.8
Q ss_pred ceEEEEEeCCChHHHHHHHH-HHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEE
Q 004090 156 LYLVYTHAGPNPFEVISQAV-KAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFL 234 (774)
Q Consensus 156 ~~~v~v~~g~dp~~~i~~a~-~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~v 234 (774)
++.+++..+.+.++.|++.+ +.+|+++..-+. ..+++ ++|||||+++|+++||+.|++.++.+++.|++ ++
T Consensus 4 tP~~~~~~s~~gl~~~s~~~h~~~r~~~~~~~~-~~~~~-----pv~~nsW~~~~~d~~e~~i~~~a~~~~~~G~e--~f 75 (394)
T PF02065_consen 4 TPEAVASYSDQGLNGMSQRFHRFVRRHLLRPPW-RDKPP-----PVGWNSWEAYYFDITEEKILELADAAAELGYE--YF 75 (394)
T ss_dssp ---EEEEEESBHHHHHHHHHHHHHHHHTSTTTT-TTSS-------EEEESHHHHTTG--HHHHHHHHHHHHHHT-S--EE
T ss_pred CCeEEEEEecCCHHHHHHHHHHHHHHhcCCCcc-CCCCC-----ceEEEcccccCcCCCHHHHHHHHHHHHHhCCE--EE
Confidence 45678888889999999999 577887644221 22333 47899999999999999999999999999987 99
Q ss_pred EEecccccccCCCCcccchhhccccccccccCCCccC-CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeeccccc
Q 004090 235 IIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYW 313 (774)
Q Consensus 235 IIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYW 313 (774)
+||||||..+++.. ..+++|..+ +||| +||++++++||+ .|+| +|+|.++
T Consensus 76 viDDGW~~~r~~d~--------------~~~GdW~~~~~kFP---------~Gl~~l~~~i~~-~Gmk-~GlW~eP---- 126 (394)
T PF02065_consen 76 VIDDGWFGGRDDDN--------------AGLGDWEPDPKKFP---------NGLKPLADYIHS-LGMK-FGLWFEP---- 126 (394)
T ss_dssp EE-SSSBCTESTTT--------------STTSBECBBTTTST---------THHHHHHHHHHH-TT-E-EEEEEET----
T ss_pred EEcCccccccCCCc--------------ccCCceeEChhhhC---------CcHHHHHHHHHH-CCCe-EEEEecc----
Confidence 99999998865532 357888865 7888 899999999999 7999 9999998
Q ss_pred CCcCCCCcccccccccccccCCCCCCCCCCCcceecccccc--cCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccch
Q 004090 314 GGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVH--GLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNII 391 (774)
Q Consensus 314 gGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~--glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l 391 (774)
..+.|+++..+.+...++.....+.. ...+ -+++.+|+..+.+++.+.+.|++|||||+|+|++..+
T Consensus 127 e~v~~~S~l~~~hPdw~l~~~~~~~~-----------~~r~~~vLD~~~pev~~~l~~~i~~ll~~~gidYiK~D~n~~~ 195 (394)
T PF02065_consen 127 EMVSPDSDLYREHPDWVLRDPGRPPT-----------LGRNQYVLDLSNPEVRDYLFEVIDRLLREWGIDYIKWDFNRDI 195 (394)
T ss_dssp TEEESSSCHCCSSBGGBTCCTTSE-E-----------CBTTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SEEEEE-TS-T
T ss_pred ccccchhHHHHhCccceeecCCCCCc-----------CcccceEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEeccccCC
Confidence 46888887644443332211000000 0011 1567788877777788889999999999999999865
Q ss_pred hhccCCCCC--chhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccc-cccccEEEecCCC
Q 004090 392 ETLGAGHGG--RVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYS-SKQTAVIRASDDY 451 (774)
Q Consensus 392 ~~l~~~~~g--~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~-~~~~~~~R~SdDf 451 (774)
...+....+ ..+...++++-++ .+++.||+.-|.+|-|.+.-.=+. -.+....-+||+-
T Consensus 196 ~~~~~~~~~~~~~~~~~~~y~l~~-~L~~~~P~v~iE~CssGG~R~D~g~l~~~~~~w~SD~t 257 (394)
T PF02065_consen 196 TEAGSPSLPEGYHRYVLGLYRLLD-RLRARFPDVLIENCSSGGGRFDPGMLYYTPQSWTSDNT 257 (394)
T ss_dssp TS-SSTTS-GHHHHHHHHHHHHHH-HHHHHTTTSEEEE-BTTBTTTSHHHHCCSSEEESBST-
T ss_pred CCCCCCCchHHHHHHHHHHHHHHH-HHHHhCCCcEEEeccCCCCccccchheeccccccCCcc
Confidence 433322211 1133444455444 577889988788887765422121 2445556677754
No 14
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.7e-23 Score=228.67 Aligned_cols=284 Identities=22% Similarity=0.307 Sum_probs=200.6
Q ss_pred eEEEEEEEeecCceEEEeecCCCCeEE----EEEecCCcceeccc--cceEEEEEeCCChHHHHHHHHH-HHHHHhcccc
Q 004090 114 TIYTVFLPLLEGQFRSALQGNENNEIE----ICLESGDNAVETNQ--GLYLVYTHAGPNPFEVISQAVK-AVEKYMQTFT 186 (774)
Q Consensus 114 ~~y~v~Lpl~~g~~ra~L~~~~~~~l~----i~~~sg~~~~~~~~--~~~~v~v~~g~dp~~~i~~a~~-~~~~~l~t~~ 186 (774)
.+|.+.|..| |+|++-.+-+..+... +...+++-.-...+ .++.++|...+.....|+++++ ++++++.. +
T Consensus 208 ~V~gf~l~~S-gnf~~f~ev~q~~~~~Vq~g~l~~~~e~~l~~~e~f~tpe~lv~~edqgl~~lsq~y~~~v~~~i~~-~ 285 (687)
T COG3345 208 EVYGFGLTYS-GNFAAFVEVHQHPFFRVQDGILPFDGEWFLEEFESFVTPEVLVVLEDQGLNGLSQKYAELVRMEIVP-R 285 (687)
T ss_pred eEEEEEEeec-cchhheeeeccCchhhhhhcccccCceEecccccccCCceEEEEEcCCCcchHHHHHHHHHHhhcCc-c
Confidence 4899989885 4577766665433221 11122222111111 2455666666666889999994 77776543 2
Q ss_pred ccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccC
Q 004090 187 HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLT 266 (774)
Q Consensus 187 ~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~ 266 (774)
.+.+|++| +|||||+|+|.++|++.|++.++.+++.|++ ++|||||||..++|+. +.|+
T Consensus 286 ~~~~kprP-----i~~nsWea~Yfd~t~e~ile~vk~akk~gvE--~FvlDDGwfg~rndd~--------------~slG 344 (687)
T COG3345 286 PRVKKPRP-----IGWNSWEAYYFDFTEEEILENVKEAKKFGVE--LFVLDDGWFGGRNDDL--------------KSLG 344 (687)
T ss_pred cccCCCCc-----ceeeceeeeeecCCHHHHHHHHHHHhhcCeE--EEEEccccccccCcch--------------hhhh
Confidence 34567766 8999999999999999999999999999977 9999999999998865 4588
Q ss_pred CCccC-CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCc
Q 004090 267 GIKEN-SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPD 345 (774)
Q Consensus 267 ~~~~n-~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd 345 (774)
||--| +||| +|+..+++.|++ .|++ +|+|.++. +|+-+|++ | +.|||
T Consensus 345 DWlv~seKfP---------sgiE~li~~I~e-~Gl~-fGIWlePe----mvs~dSdl---f--------------rqHPD 392 (687)
T COG3345 345 DWLVNSEKFP---------SGIEELIEAIAE-NGLI-FGIWLEPE----MVSEDSDL---F--------------RQHPD 392 (687)
T ss_pred ceecchhhcc---------ccHHHHHHHHHH-cCCc-cceeecch----hcccchHH---H--------------hhCCC
Confidence 88865 8999 899999999999 7999 99999985 68777765 2 46788
Q ss_pred ceecccc----cc----cCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCch-hHHHHHHHHHHHHH
Q 004090 346 IVMDSLA----VH----GLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRV-SLTRSYHQALEASI 416 (774)
Q Consensus 346 ~~~~~~~----~~----glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~-~l~~ay~~AL~~s~ 416 (774)
|++..-. .+ ++.+.+|..+...++.+...|-..-|||+|+|++..+-.++...-+.. .+....|+-.+ .+
T Consensus 393 Wvvk~~G~p~~~~Rnqyvl~~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~l~klg~~~~~~l~qqry~ly~l~~-~l 471 (687)
T COG3345 393 WVVKVNGYPLMAGRNQYVLWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRELFKLGFLFWGALPQQRYQLYRLFD-QL 471 (687)
T ss_pred eEEecCCccccccccchhhhccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcceeecCCCCCccccchHHHHHHHHH-Hh
Confidence 8875211 11 134568998999999999888899999999999887655543322222 22222355555 46
Q ss_pred HhcCCCCcEEeeccCCC----------CCccccc------cccEEEecCCCCC
Q 004090 417 ARNFPDNGCISCMCHNT----------DGIYSSK------QTAVIRASDDYYP 453 (774)
Q Consensus 417 ~~~f~g~~iI~cMs~~~----------~~l~~~~------~~~~~R~SdDf~p 453 (774)
..+|+.....+|-+... ..+|.+. ...+.|.+-+++|
T Consensus 472 ~~k~~~i~FeScasGg~r~d~gml~~~~~~w~Sd~~dAi~r~~iqrg~s~~~P 524 (687)
T COG3345 472 NLKFPHILFESCASGGERIDKGMLEYSPQLWCSDLTDAIGRLDIQRGGSYTYP 524 (687)
T ss_pred hhcCCCchhhhhcccccccchHHhhhcccccCCCCcchhhhccccccCcccCC
Confidence 67788777888887653 2234442 2356799999999
No 15
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=99.43 E-value=7.1e-13 Score=143.81 Aligned_cols=150 Identities=19% Similarity=0.346 Sum_probs=103.1
Q ss_pred ccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCcc-CCcc
Q 004090 196 FLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE-NSKF 274 (774)
Q Consensus 196 ~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n~KF 274 (774)
.+....||||++++..+|++.|++.++.+++.|+|+..++|||+||...+ +|+- ++||
T Consensus 11 ~~~~p~W~~W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g---------------------~f~~d~~~F 69 (303)
T cd06592 11 MFRSPIWSTWARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYG---------------------DFDFDPTKF 69 (303)
T ss_pred HhCCCccCChhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCC---------------------ccccChhhC
Confidence 46677899999999999999999999999999999999999999996432 3443 4689
Q ss_pred cccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccc
Q 004090 275 QKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVH 354 (774)
Q Consensus 275 p~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~ 354 (774)
| +++.++++||+ .|+| +++|..+. |.++++..+....+-..-+...| ..|.. ... ..
T Consensus 70 P----------dp~~mi~~l~~-~G~k-~~l~i~P~-----i~~~s~~~~e~~~~g~~vk~~~g---~~~~~-~~~--w~ 126 (303)
T cd06592 70 P----------DPKGMIDQLHD-LGFR-VTLWVHPF-----INTDSENFREAVEKGYLVSEPSG---DIPAL-TRW--WN 126 (303)
T ss_pred C----------CHHHHHHHHHH-CCCe-EEEEECCe-----eCCCCHHHHhhhhCCeEEECCCC---CCCcc-cce--ec
Confidence 8 58999999999 7998 99998884 66665432221111111111111 01100 000 11
Q ss_pred c----CCccChHHHHHHHHHHHHHH-HhcCCCEEEEccccc
Q 004090 355 G----LGLVHPKKVFNFYNELHAYL-ASCGVDGVKVDVQNI 390 (774)
Q Consensus 355 g----lglv~p~~~~~fyd~~~~~L-as~GVD~VKvD~q~~ 390 (774)
| +++.+|+ |+++|.+.++.+ .+.|||++|.|++-.
T Consensus 127 g~~~~~Dftnp~-a~~w~~~~~~~~~~~~Gvdg~w~D~~E~ 166 (303)
T cd06592 127 GTAAVLDFTNPE-AVDWFLSRLKSLQEKYGIDSFKFDAGEA 166 (303)
T ss_pred CCcceEeCCCHH-HHHHHHHHHHHHHHHhCCcEEEeCCCCc
Confidence 2 3456776 555555555544 599999999999763
No 16
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=99.10 E-value=2.4e-09 Score=116.52 Aligned_cols=136 Identities=15% Similarity=0.196 Sum_probs=93.9
Q ss_pred cCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccC-CcccccccCCCCCCChHH
Q 004090 211 DVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKFQKKCQNSEQVSGLKH 289 (774)
Q Consensus 211 ~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KFp~~~~~~~~~~GLk~ 289 (774)
..|++.|++.++.+++.|||...++|||+|+.... +.+|.-| +||| .+++
T Consensus 20 y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~-------------------~~~f~~d~~~FP----------d~~~ 70 (308)
T cd06593 20 YYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQ-------------------WCDFEFDPDRFP----------DPEG 70 (308)
T ss_pred CCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCc-------------------ceeeEECcccCC----------CHHH
Confidence 38999999999999999999999999999994321 3456644 7999 5799
Q ss_pred HHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccc----CCccChHHHH
Q 004090 290 VVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG----LGLVHPKKVF 365 (774)
Q Consensus 290 ~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~g----lglv~p~~~~ 365 (774)
+++++|+ .|+| +.+|..+. |.++++..+....+-...+...|..... . ...| +++.+|+ ++
T Consensus 71 ~i~~l~~-~G~~-~~~~~~P~-----i~~~~~~~~e~~~~g~~v~~~~g~~~~~-----~--~w~g~~~~~Dftnp~-a~ 135 (308)
T cd06593 71 MLSRLKE-KGFK-VCLWINPY-----IAQKSPLFKEAAEKGYLVKKPDGSVWQW-----D--LWQPGMGIIDFTNPD-AC 135 (308)
T ss_pred HHHHHHH-CCCe-EEEEecCC-----CCCCchhHHHHHHCCeEEECCCCCeeee-----c--ccCCCcccccCCCHH-HH
Confidence 9999998 7999 99999874 7676643222211111111111110000 0 0112 3455664 67
Q ss_pred HHHHHHHHHHHhcCCCEEEEccccc
Q 004090 366 NFYNELHAYLASCGVDGVKVDVQNI 390 (774)
Q Consensus 366 ~fyd~~~~~Las~GVD~VKvD~q~~ 390 (774)
+||.+.++.+.+.|||++|.|.+..
T Consensus 136 ~w~~~~~~~~~~~Gid~~~~D~~e~ 160 (308)
T cd06593 136 KWYKDKLKPLLDMGVDCFKTDFGER 160 (308)
T ss_pred HHHHHHHHHHHHhCCcEEecCCCCC
Confidence 8888888889999999999999864
No 17
>PRK10658 putative alpha-glucosidase; Provisional
Probab=98.85 E-value=1.8e-07 Score=111.53 Aligned_cols=178 Identities=16% Similarity=0.203 Sum_probs=116.1
Q ss_pred EEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEec
Q 004090 159 VYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDD 238 (774)
Q Consensus 159 v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDD 238 (774)
.|+-.|.+|-+++++-.++ .+.. .-+|.|.-++=.|+ .|+.+-+++.|++.++.+++.+||+..+.||+
T Consensus 238 yy~~~G~tp~~v~~~Yt~L----TGrp-----~lpP~WalG~w~s~--~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~ 306 (665)
T PRK10658 238 YFVIDGPTPKEVLDRYTAL----TGRP-----ALPPAWSFGLWLTT--SFTTNYDEATVNSFIDGMAERDLPLHVFHFDC 306 (665)
T ss_pred EEEEeCCCHHHHHHHHHHH----hCCC-----CCCchhhhheeeec--ccccCCCHHHHHHHHHHHHHcCCCceEEEEch
Confidence 6777899988877764432 2221 22466654442233 35556789999999999999999999999999
Q ss_pred ccccccCCCCcccchhhccccccccccCCCc-cCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcC
Q 004090 239 GWQQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVK 317 (774)
Q Consensus 239 GWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~ 317 (774)
.|++... |.+|+ ++++|| ..+.+++++|+ .|+| +.+|..+ +|.
T Consensus 307 ~w~~~~~-------------------~~~f~wd~~~FP----------dp~~mi~~L~~-~G~k-~~~~i~P-----~i~ 350 (665)
T PRK10658 307 FWMKEFQ-------------------WCDFEWDPRTFP----------DPEGMLKRLKA-KGLK-ICVWINP-----YIA 350 (665)
T ss_pred hhhcCCc-------------------eeeeEEChhhCC----------CHHHHHHHHHH-CCCE-EEEeccC-----CcC
Confidence 9986421 34455 357899 45899999999 6999 8899776 366
Q ss_pred CCCcccccccccccccCCCCCCCCCCCcceeccccccc---CCccChHHHHHHHHHHHHHHHhcCCCEEEEccccc
Q 004090 318 PAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG---LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNI 390 (774)
Q Consensus 318 P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~g---lglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~ 390 (774)
++++.++.-..+-.+.+...|. .+..+.+ .++ ++..+|+ |+++|.+.++.|.+.|||++|.|+.-.
T Consensus 351 ~~s~~f~e~~~~gy~vk~~~G~-----~~~~~~W-~g~~~~~Dftnp~-ar~W~~~~~~~l~d~Gvdgfw~D~gE~ 419 (665)
T PRK10658 351 QKSPLFKEGKEKGYLLKRPDGS-----VWQWDKW-QPGMAIVDFTNPD-ACKWYADKLKGLLDMGVDCFKTDFGER 419 (665)
T ss_pred CCchHHHHHHHCCeEEECCCCC-----Eeeeeec-CCCceeecCCCHH-HHHHHHHHHHHHHhcCCcEEEecCCce
Confidence 6654322211111111111121 1222222 122 3445665 778888888889999999999997643
No 18
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.72 E-value=3e-07 Score=99.54 Aligned_cols=210 Identities=19% Similarity=0.159 Sum_probs=124.8
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 271 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 271 (774)
+|.|.=++=+|.|. + .|++.|++.++.+++.|||+..+.||++|+..+.... ...++.+|+ .+
T Consensus 7 ~P~walG~~qsr~~-y---~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~------------~~~~~~~ft~d~ 70 (292)
T cd06595 7 LPRYAFGNWWSRYW-P---YSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSK------------YGSGWTGYSWNR 70 (292)
T ss_pred CchHHHHhHhhCCc-C---CCHHHHHHHHHHHHHhCCCccEEEEeccccccccccc------------ccCCcceeEECh
Confidence 45555555568763 2 3889999999999999999999999999987543211 001245566 34
Q ss_pred CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccc
Q 004090 272 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSL 351 (774)
Q Consensus 272 ~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~ 351 (774)
++|| +.+.+++++|+ .|+| +.+|.-+. -++.+..+ .|+. +.. ..+........
T Consensus 71 ~~FP----------dp~~mi~~Lh~-~G~k-~v~~v~P~---~~~~~~~~---~y~~-~~~---~~~~~~~~~~~----- 123 (292)
T cd06595 71 KLFP----------DPEKLLQDLHD-RGLK-VTLNLHPA---DGIRAHED---QYPE-MAK---ALGVDPATEGP----- 123 (292)
T ss_pred hcCC----------CHHHHHHHHHH-CCCE-EEEEeCCC---cccCCCcH---HHHH-HHH---hcCCCcccCCe-----
Confidence 7899 56999999999 6999 66887664 13433322 2332 100 00110000000
Q ss_pred ccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHH--HHHHHHHHHHHHhcCCCCcEEeec
Q 004090 352 AVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLT--RSYHQALEASIARNFPDNGCISCM 429 (774)
Q Consensus 352 ~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~--~ay~~AL~~s~~~~f~g~~iI~cM 429 (774)
.=+...+|+..+.|++.+++.|.+.|||++|.|++--.... ..+...... ...+.... + -..|++|.+=
T Consensus 124 --~~~D~tnp~a~~~w~~~~~~~~~~~Gidg~W~D~~E~~~~~--~~~~~~~~~~~~~~y~~~~----~-~~~r~f~lsR 194 (292)
T cd06595 124 --ILFDLTNPKFMDAYFDNVHRPLEKQGVDFWWLDWQQGNRTR--TPGLDPLWWLNHVHYLDSA----R-NGRRPLIFSR 194 (292)
T ss_pred --EEecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCCCCcccc--cCCcchHHHHHHHHHHHhh----c-cCCCcEEEEe
Confidence 00346788877778899999999999999999986422111 111111111 22222222 1 1256677766
Q ss_pred cCCCCCccccccccEEEecCCCCCCCccch
Q 004090 430 CHNTDGIYSSKQTAVIRASDDYYPRDPASH 459 (774)
Q Consensus 430 s~~~~~l~~~~~~~~~R~SdDf~p~~p~~~ 459 (774)
|...- ..+++..| |.|....|..+.
T Consensus 195 s~~~G---~qry~~~W--sGD~~s~W~~l~ 219 (292)
T cd06595 195 WAGLG---SHRYPIGF--SGDTIISWASLA 219 (292)
T ss_pred ecccC---CCcCCCcc--CCCcccCHHHHH
Confidence 53321 23566666 788877776544
No 19
>PRK10426 alpha-glucosidase; Provisional
Probab=98.68 E-value=5.1e-06 Score=98.88 Aligned_cols=181 Identities=12% Similarity=0.149 Sum_probs=107.8
Q ss_pred EEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccc-cccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEe
Q 004090 159 VYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLD-WFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIID 237 (774)
Q Consensus 159 v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d-~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIID 237 (774)
+++-.|++|-+++++-.++ .+.. .-+|.|.- ++ |-.++ -+++.|++.++.+++.|||+..+.||
T Consensus 179 ~y~~~G~~~~~vi~~yt~l----tGr~-----p~~P~Wal~G~----~~g~~--~~~~~v~~v~~~~r~~~IP~d~i~ld 243 (635)
T PRK10426 179 LRFECADTYISLLEKLTAL----FGRQ-----PELPDWAYDGV----TLGIQ--GGTEVVQKKLDTMRNAGVKVNGIWAQ 243 (635)
T ss_pred EEEEeCCCHHHHHHHHHHh----hCCC-----CCCChhhccCc----ccccc--CCHHHHHHHHHHHHHcCCCeeEEEEe
Confidence 6777899988777665443 2211 12455532 33 22232 25788999999999999999999998
Q ss_pred cccccccCCCCcccchhhccccccc-cccCCCc-cCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCC
Q 004090 238 DGWQQIENKPKEESNCIVQEGAQFA-SRLTGIK-ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGG 315 (774)
Q Consensus 238 DGWQ~~~~~~~~~~~~~~~~~~~~~-~~L~~~~-~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgG 315 (774)
| |+..+... |. +-+.+|+ ..++|| +.+.+++++|+ .|+| +-+|.-+ +
T Consensus 244 d-w~~~~~~~-------------~g~~~~~~~~~d~~~FP----------dp~~mi~~L~~-~G~k-~v~~i~P-----~ 292 (635)
T PRK10426 244 D-WSGIRMTS-------------FGKRLMWNWKWDSERYP----------QLDSRIKQLNE-EGIQ-FLGYINP-----Y 292 (635)
T ss_pred c-cccccccc-------------ccccccccceEChhhCC----------CHHHHHHHHHH-CCCE-EEEEEcC-----c
Confidence 5 98654321 11 1133455 347899 57999999998 6999 7788665 3
Q ss_pred cCCCCcccccccccccccCCCCCCCCCCCcceecccc-ccc-CCccChHHHHHHHHHHHHHHHhcCCCEEEEccccc
Q 004090 316 VKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA-VHG-LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNI 390 (774)
Q Consensus 316 I~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~-~~g-lglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~ 390 (774)
|.++.+..+.-..+-.+.+...|. + ...+.+. ..+ +++.+|+..+.|.+.+++.|.+.|||++|.|++-.
T Consensus 293 v~~~~~~y~e~~~~gy~vk~~~g~----~-~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~ 364 (635)
T PRK10426 293 LASDGDLCEEAAEKGYLAKDADGG----D-YLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGEY 364 (635)
T ss_pred cCCCCHHHHHHHHCCcEEECCCCC----E-EEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeCCCC
Confidence 666543322111111111111111 1 1111110 011 34667765444446667789999999999998764
No 20
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.68 E-value=2.3e-07 Score=101.52 Aligned_cols=155 Identities=17% Similarity=0.181 Sum_probs=100.5
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 271 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 271 (774)
+|.|.=++=.|.|. | -+++.|++.++.+++.+||+..|.||++|+..+.+.. ...+|+ ..
T Consensus 6 ~P~wa~G~~~s~~~-y---~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~---------------~~~~f~wd~ 66 (317)
T cd06598 6 PPRWALGNWASRFG-Y---RNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKG---------------HMGNLDWDR 66 (317)
T ss_pred CchHHHHHHHhcCC-C---CCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCC---------------ceeeeEecc
Confidence 45555555567763 2 3799999999999999999999999999987554211 123455 34
Q ss_pred CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCccccccccccc-ccCCCCCCCCCCCcceecc
Q 004090 272 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALA-YPVTSPGVMGNQPDIVMDS 350 (774)
Q Consensus 272 ~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~-~p~~spg~~~~~pd~~~~~ 350 (774)
+||| ..+.+++++|+ .|+| +.+|..+. |.++++..+.-..+-. ..+...| .| ...+.
T Consensus 67 ~~FP----------dp~~mi~~L~~-~G~k-~~~~v~P~-----v~~~~~~y~e~~~~g~l~~~~~~~----~~-~~~~~ 124 (317)
T cd06598 67 KAFP----------DPAGMIADLAK-KGVK-TIVITEPF-----VLKNSKNWGEAVKAGALLKKDQGG----VP-TLFDF 124 (317)
T ss_pred ccCC----------CHHHHHHHHHH-cCCc-EEEEEcCc-----ccCCchhHHHHHhCCCEEEECCCC----CE-eeeec
Confidence 7999 46999999999 7999 78887664 6665543211111110 0000001 11 00000
Q ss_pred cc-ccc-CCccChHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 004090 351 LA-VHG-LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 389 (774)
Q Consensus 351 ~~-~~g-lglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~ 389 (774)
+. ..+ +++.+|+ ++++|.+.++.+.+.|||++|.|++-
T Consensus 125 w~g~~~~~Dftnp~-a~~w~~~~~~~~~~~Gvdg~w~D~~E 164 (317)
T cd06598 125 WFGNTGLIDWFDPA-AQAWFHDNYKKLIDQGVTGWWGDLGE 164 (317)
T ss_pred cCCCccccCCCCHH-HHHHHHHHHHHhhhCCccEEEecCCC
Confidence 10 011 3456776 78888888999999999999999974
No 21
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.62 E-value=1.7e-07 Score=102.62 Aligned_cols=155 Identities=14% Similarity=0.182 Sum_probs=99.3
Q ss_pred CCccccccccccccccc--ccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-
Q 004090 193 LPSFLDWFGWCTWDAFY--TDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK- 269 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~--~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~- 269 (774)
+|.|.=++=.|.| .|. .+.+++.|++.++.+++.+||+..+.||++|++..... ..+|+
T Consensus 6 pP~walG~~~sr~-~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~-----------------~~~f~~ 67 (317)
T cd06599 6 VPRWSLGYSGSTM-YYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGK-----------------RYVFNW 67 (317)
T ss_pred CchHHHHHHhcCC-CCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCc-----------------eeeeec
Confidence 3555556667787 222 24679999999999999999999999999999763211 12233
Q ss_pred cCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceec
Q 004090 270 ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMD 349 (774)
Q Consensus 270 ~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~ 349 (774)
..++|| ..+.+++++|+ .|+| +.+|.-++ |.++++..+..+.+-.+-+...| ..|... .
T Consensus 68 d~~~FP----------dp~~mi~~L~~-~g~k-~~~~i~P~-----i~~~~~~y~e~~~~g~~v~~~~g---~~~~~~-~ 126 (317)
T cd06599 68 NKDRFP----------DPAAFVAKFHE-RGIR-LAPNIKPG-----LLQDHPRYKELKEAGAFIKPPDG---REPSIG-Q 126 (317)
T ss_pred CcccCC----------CHHHHHHHHHH-CCCE-EEEEeCCc-----ccCCCHHHHHHHHCCcEEEcCCC---CCccee-c
Confidence 347899 57999999999 6999 77888774 66665432222222111111111 111110 0
Q ss_pred cccccc----CCccChHHHHHHHHH-HHHHHHhcCCCEEEEcccc
Q 004090 350 SLAVHG----LGLVHPKKVFNFYNE-LHAYLASCGVDGVKVDVQN 389 (774)
Q Consensus 350 ~~~~~g----lglv~p~~~~~fyd~-~~~~Las~GVD~VKvD~q~ 389 (774)
...| +++.+|+ |+++|.+ +.+.|.+.|||++|.|.+-
T Consensus 127 --~w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~Gvdg~w~D~~E 168 (317)
T cd06599 127 --FWGGVGSFVDFTNPE-GREWWKEGVKEALLDLGIDSTWNDNNE 168 (317)
T ss_pred --ccCCCeEeecCCChH-HHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 0123 3456776 5556655 5588899999999999874
No 22
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=98.61 E-value=4.6e-07 Score=99.31 Aligned_cols=149 Identities=17% Similarity=0.160 Sum_probs=100.1
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 271 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 271 (774)
+|.|.=++=+|.|.- -+++.|++.++.+++.+||+..++||..|+...+ +.+|. ..
T Consensus 6 ~P~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~-------------------~~~f~~d~ 62 (319)
T cd06591 6 MPKWAYGFWQSKERY----KTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQG-------------------WGEWKFDP 62 (319)
T ss_pred CchHHHHHHHhcccC----CCHHHHHHHHHHHHHhCCCccEEEEechhhcCCC-------------------ceeEEECh
Confidence 355555555677632 3899999999999999999999999998875322 33455 34
Q ss_pred CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccc
Q 004090 272 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSL 351 (774)
Q Consensus 272 ~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~ 351 (774)
+||| ..+.+++++|+ .|+| |.+|.-+. |.++++..+..+.+-.+-+.+.|... . .
T Consensus 63 ~~FP----------dp~~mi~~L~~-~G~k-v~~~i~P~-----v~~~~~~y~e~~~~g~~v~~~~g~~~----~----~ 117 (319)
T cd06591 63 ERFP----------DPKAMVRELHE-MNAE-LMISIWPT-----FGPETENYKEMDEKGYLIKTDRGPRV----T----M 117 (319)
T ss_pred hhCC----------CHHHHHHHHHH-CCCE-EEEEecCC-----cCCCChhHHHHHHCCEEEEcCCCCee----e----e
Confidence 7899 57999999998 7998 77787663 66665443322222111111112110 0 0
Q ss_pred cccc----CCccChHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 004090 352 AVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 389 (774)
Q Consensus 352 ~~~g----lglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~ 389 (774)
...| +++.+|+....|++.+++.|.+.|||++|.|++-
T Consensus 118 ~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E 159 (319)
T cd06591 118 QFGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAAE 159 (319)
T ss_pred eCCCCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEecCCC
Confidence 0122 4566787655567889999999999999999985
No 23
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=98.52 E-value=2.4e-06 Score=93.71 Aligned_cols=154 Identities=18% Similarity=0.227 Sum_probs=94.4
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 271 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 271 (774)
+|.+.-++=+|.+. . ++++|++.++.+++.+||+..+.|| .|+....... |. +.+.+|+ +.
T Consensus 6 ~P~wa~G~~~~~~~---~--s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~---------g~---~~~~~f~~d~ 67 (317)
T cd06594 6 LPDWAYGGAILGLQ---G--GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSF---------GD---RLWWNWEWDP 67 (317)
T ss_pred CchhhhCcEEeeee---C--CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccc---------cc---eeeeeeEECh
Confidence 56666554455442 2 9999999999999999999999999 4875321110 00 0123355 34
Q ss_pred CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccc---cccCCCCCCCCCCCccee
Q 004090 272 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTAL---AYPVTSPGVMGNQPDIVM 348 (774)
Q Consensus 272 ~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~---~~p~~spg~~~~~pd~~~ 348 (774)
++|| ..+.+++++|+ .|+| +.+|.-+. |.+++... |+... .+.+...|. | ...
T Consensus 68 ~~FP----------dp~~mi~~Lh~-~G~~-~~~~i~P~-----v~~~~~~~--y~~~~~~g~~vk~~~g~----~-~~~ 123 (317)
T cd06594 68 ERYP----------GLDELIEELKA-RGIR-VLTYINPY-----LADDGPLY--YEEAKDAGYLVKDADGS----P-YLV 123 (317)
T ss_pred hhCC----------CHHHHHHHHHH-CCCE-EEEEecCc-----eecCCchh--HHHHHHCCeEEECCCCC----e-eee
Confidence 7899 57999999999 6999 77887663 66654221 22211 111111111 1 000
Q ss_pred ccccccc----CCccChHHHHHHHHHHHHHHHhcCCCEEEEccccc
Q 004090 349 DSLAVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNI 390 (774)
Q Consensus 349 ~~~~~~g----lglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~ 390 (774)
.. ..| +++.+|+..+-|.+.+..++.+.|||++|.|++-.
T Consensus 124 ~~--w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E~ 167 (317)
T cd06594 124 DF--GEFDCGVLDLTNPAARDWFKQVIKEMLLDLGLSGWMADFGEY 167 (317)
T ss_pred cc--CCCCceeeecCCHHHHHHHHHHHHHHhhhcCCcEEEecCCCC
Confidence 00 112 44567775554446666676899999999998753
No 24
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.51 E-value=9.6e-06 Score=89.81 Aligned_cols=163 Identities=19% Similarity=0.283 Sum_probs=93.0
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccC-----CCCcccchhhccccccccccCC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIEN-----KPKEESNCIVQEGAQFASRLTG 267 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~-----~~~~~~~~~~~~~~~~~~~L~~ 267 (774)
+|.+.=++..|.|. --|++.|++.++.+++.|||+..|.||| ||..+. |.+ . . ..+....|. +.+
T Consensus 6 pP~walG~~~sr~~----Y~~~~ev~~v~~~~~~~~iP~d~i~lD~-W~~~~~~~~w~d~~-y-~-~~~~~~~~~--~~~ 75 (340)
T cd06597 6 LPKWAFGLWMSANE----WDTQAEVMRQMDAHEEHGIPVTVVVIEQ-WSDEATFYVFNDAQ-Y-T-PKDGGAPLS--YDD 75 (340)
T ss_pred CchHHhhhhhhccC----CCCHHHHHHHHHHHHHcCCCeeEEEEec-ccCcceeeeeccch-h-c-ccccCCcce--ecc
Confidence 56666667777763 3689999999999999999999999996 987532 100 0 0 000001111 111
Q ss_pred --CccCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcc-cc---ccc---ccccccCCCCC
Q 004090 268 --IKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADG-ME---HYD---TALAYPVTSPG 338 (774)
Q Consensus 268 --~~~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~-~~---~y~---~~~~~p~~spg 338 (774)
|...+||| ..+.+|++||+ .|+| +.+|..+. |.++... .. .|+ .+-.+-+.+.|
T Consensus 76 ~~f~~~~~FP----------dp~~mi~~Lh~-~G~k-v~l~v~P~-----i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G 138 (340)
T cd06597 76 FSFPVEGRWP----------NPKGMIDELHE-QGVK-VLLWQIPI-----IKLRPHPHGQADNDEDYAVAQNYLVQRGVG 138 (340)
T ss_pred cccCccccCC----------CHHHHHHHHHH-CCCE-EEEEecCc-----cccccccccccchhHHHHHHCCEEEEcCCC
Confidence 22235677 67999999999 6998 78997764 5443210 00 010 00001111111
Q ss_pred CCCCCCcceeccccccc----CCccChHHHHHHHHHHHHHHH-hcCCCEEEEcccc
Q 004090 339 VMGNQPDIVMDSLAVHG----LGLVHPKKVFNFYNELHAYLA-SCGVDGVKVDVQN 389 (774)
Q Consensus 339 ~~~~~pd~~~~~~~~~g----lglv~p~~~~~fyd~~~~~La-s~GVD~VKvD~q~ 389 (774)
..-..|. ...| +++.+|+ |+++|.+.++.+. +.|||++|.|+.-
T Consensus 139 ~~~~~~~------~W~g~~~~~Dftnp~-a~~Ww~~~~~~~~~~~Gidg~w~D~~E 187 (340)
T cd06597 139 KPYRIPG------QWFPDSLMLDFTNPE-AAQWWMEKRRYLVDELGIDGFKTDGGE 187 (340)
T ss_pred Ccccccc------ccCCCceeecCCCHH-HHHHHHHHHHHHHHhcCCcEEEecCCC
Confidence 1000010 0112 4566776 5557776666654 7999999999864
No 25
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=98.46 E-value=3.7e-06 Score=95.88 Aligned_cols=171 Identities=24% Similarity=0.391 Sum_probs=100.6
Q ss_pred EEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecc
Q 004090 160 YTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG 239 (774)
Q Consensus 160 ~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDG 239 (774)
|+=.|++|-++|++-.++ .+. ...+|.|.-++=+|.|.. -|++.|.+.++.+++.++|+..+.||++
T Consensus 1 y~~~G~~~~~v~~~y~~l----tG~-----~~~pP~walG~~~~~~~~----~~~~~v~~~i~~~~~~~iP~d~~~iD~~ 67 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTEL----TGR-----PPLPPRWALGFWQSRWGY----YNQDEVREVIDRYRSNGIPLDVIWIDDD 67 (441)
T ss_dssp EEEEESSHHHHHHHHHHH----HSS-----S----GGGGSEEEEESTB----TSHHHHHHHHHHHHHTT--EEEEEE-GG
T ss_pred CEEeCcCHHHHHHHHHHH----HCC-----CCCCchhhhceEeecCcC----CCHHHHHHHHHHHHHcCCCccceecccc
Confidence 344677876666555443 232 233566665665666643 5699999999999999999999999999
Q ss_pred cccccCCCCcccchhhccccccccccCCCc-cCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCC
Q 004090 240 WQQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKP 318 (774)
Q Consensus 240 WQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P 318 (774)
|+....+ |+ ..++|| +++.+++.+|+ .|+| +.+|..+. |.+
T Consensus 68 ~~~~~~~---------------------f~~d~~~FP----------d~~~~~~~l~~-~G~~-~~~~~~P~-----v~~ 109 (441)
T PF01055_consen 68 YQDGYGD---------------------FTWDPERFP----------DPKQMIDELHD-QGIK-VVLWVHPF-----VSN 109 (441)
T ss_dssp GSBTTBT---------------------T-B-TTTTT----------THHHHHHHHHH-TT-E-EEEEEESE-----EET
T ss_pred ccccccc---------------------ccccccccc----------chHHHHHhHhh-CCcE-EEEEeecc-----cCC
Confidence 9984332 34 336898 78999999999 6999 88998874 766
Q ss_pred CCcccccccccc---cccCCCCCCCCCCCcceeccccccc----CCccChHHHHHHHHHHHHHHHhc-CCCEEEEcccc
Q 004090 319 AADGMEHYDTAL---AYPVTSPGVMGNQPDIVMDSLAVHG----LGLVHPKKVFNFYNELHAYLASC-GVDGVKVDVQN 389 (774)
Q Consensus 319 ~~~~~~~y~~~~---~~p~~spg~~~~~pd~~~~~~~~~g----lglv~p~~~~~fyd~~~~~Las~-GVD~VKvD~q~ 389 (774)
++...+.|+... .+-+...| ++- .... +.| +++.+|+ ++.+|.+.++.+.+. |||++|.|.+-
T Consensus 110 ~~~~~~~~~~~~~~~~~v~~~~g----~~~--~~~~-w~g~~~~~Dftnp~-a~~w~~~~~~~~~~~~Gvdg~w~D~~E 180 (441)
T PF01055_consen 110 DSPDYENYDEAKEKGYLVKNPDG----SPY--IGRV-WPGKGGFIDFTNPE-ARDWWKEQLKELLDDYGVDGWWLDFGE 180 (441)
T ss_dssp TTTB-HHHHHHHHTT-BEBCTTS----SB---EEEE-TTEEEEEB-TTSHH-HHHHHHHHHHHHHTTST-SEEEEESTT
T ss_pred CCCcchhhhhHhhcCceeecccC----Ccc--cccc-cCCcccccCCCChh-HHHHHHHHHHHHHhccCCceEEeecCC
Confidence 654111222211 01011111 110 0001 122 3456665 777776666656655 99999999954
No 26
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=98.40 E-value=9.4e-06 Score=86.72 Aligned_cols=74 Identities=20% Similarity=0.344 Sum_probs=58.5
Q ss_pred ccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cCCcccccccCCC
Q 004090 204 TWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKFQKKCQNSE 282 (774)
Q Consensus 204 TWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KFp~~~~~~~ 282 (774)
.|-+.+...|++.|++.++.+++.++|...+.|||+|+...++. .|+ ..++||
T Consensus 13 ~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f-------------------~~~~d~~~Fp------- 66 (265)
T cd06589 13 YWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDF-------------------TFDWDAGKFP------- 66 (265)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCcee-------------------eeecChhhCC-------
Confidence 44455556799999999999999999999999999999765431 023 246898
Q ss_pred CCCChHHHHHHHHhcCCCcEEEEEee
Q 004090 283 QVSGLKHVVDESKQNHNVKYVYVWHA 308 (774)
Q Consensus 283 ~~~GLk~~v~~Ik~~~Glk~vgvWha 308 (774)
..+.+++++|+ .|+| +.+|..
T Consensus 67 ---dp~~~i~~l~~-~g~~-~~~~~~ 87 (265)
T cd06589 67 ---NPKSMIDELHD-NGVK-LVLWID 87 (265)
T ss_pred ---CHHHHHHHHHH-CCCE-EEEEeC
Confidence 57999999999 6998 777743
No 27
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=98.38 E-value=1.3e-06 Score=96.57 Aligned_cols=146 Identities=20% Similarity=0.274 Sum_probs=93.5
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 271 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 271 (774)
+|.|.=++=.|.|.. -|++.|++.++.+++.|||+..+.||++|+...++ |+ ..
T Consensus 6 ~P~walG~~~s~~~y----~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~---------------------f~~d~ 60 (339)
T cd06604 6 PPKWALGYQQSRWSY----YPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRV---------------------FTWDK 60 (339)
T ss_pred CchHHHhHHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECchhhCCCCc---------------------eeecc
Confidence 455554444455432 38899999999999999999999999999964322 33 24
Q ss_pred CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccc---cccCCCCCCCCCCCccee
Q 004090 272 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTAL---AYPVTSPGVMGNQPDIVM 348 (774)
Q Consensus 272 ~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~---~~p~~spg~~~~~pd~~~ 348 (774)
+||| ..+.+++++|+ .|+| +.+|..+.- .+.|..+ .|+... .+-+...|. |-. .
T Consensus 61 ~~fP----------dp~~m~~~l~~-~g~~-~~~~~~P~v---~~~~~~~---~~~e~~~~g~~v~~~~g~----~~~-~ 117 (339)
T cd06604 61 ERFP----------DPKELIKELHE-QGFK-VVTIIDPGV---KVDPGYD---VYEEGLENDYFVKDPDGE----LYI-G 117 (339)
T ss_pred ccCC----------CHHHHHHHHHH-CCCE-EEEEEeCce---eCCCCCh---HHHHHHHCCeEEECCCCC----EEE-E
Confidence 6899 56999999999 6999 789987741 1223221 122110 000111111 100 0
Q ss_pred ccccccc----CCccChHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 004090 349 DSLAVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 389 (774)
Q Consensus 349 ~~~~~~g----lglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~ 389 (774)
.. ..| +++.+|+ +.++|.+.++.+.+.|||++|.|.+-
T Consensus 118 ~~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~Gvdg~w~D~~E 159 (339)
T cd06604 118 RV--WPGLSAFPDFTNPK-VREWWGSLYKKFVDLGVDGIWNDMNE 159 (339)
T ss_pred Ee--cCCCccccCCCChH-HHHHHHHHHHHHhhCCCceEeecCCC
Confidence 00 112 3556776 66688888888889999999999874
No 28
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=98.38 E-value=4.5e-06 Score=92.37 Aligned_cols=207 Identities=15% Similarity=0.173 Sum_probs=116.2
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 271 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 271 (774)
+|.|.=++=+|.|.. -+++.|++.++.+++.+||+..+.||++|+...++ |+ ..
T Consensus 6 pP~walG~~~s~~~y----~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~---------------------f~~d~ 60 (339)
T cd06602 6 PPYWALGFHLCRWGY----KNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRD---------------------FTLDP 60 (339)
T ss_pred CchHHhhhHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECcccccCccc---------------------eeccc
Confidence 456666666788743 37899999999999999999999999999965432 33 24
Q ss_pred CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCC--ccccccccccc---ccCCCCCCCCCCCcc
Q 004090 272 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAA--DGMEHYDTALA---YPVTSPGVMGNQPDI 346 (774)
Q Consensus 272 ~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~--~~~~~y~~~~~---~p~~spg~~~~~pd~ 346 (774)
++||++ -++.+++++|+ .|+| +.+|..+. |.++. ..-..|+.... +-+...|. |-
T Consensus 61 ~~FPdp--------~~~~mi~~L~~-~G~k-~~~~i~P~-----v~~~~~~~~~~~~~e~~~~g~~v~~~~g~----~~- 120 (339)
T cd06602 61 VRFPGL--------KMPEFVDELHA-NGQH-YVPILDPA-----ISANEPTGSYPPYDRGLEMDVFIKNDDGS----PY- 120 (339)
T ss_pred ccCCCc--------cHHHHHHHHHH-CCCE-EEEEEeCc-----cccCcCCCCCHHHHHHHHCCeEEECCCCC----EE-
Confidence 689932 23999999998 6999 88897764 54431 01111221100 00011111 10
Q ss_pred eeccccccc----CCccChHHHHHHHHHHHH-HHHhcCCCEEEEccccchhhccCCCCCc-hhHHHHHHHHHHHHHHhcC
Q 004090 347 VMDSLAVHG----LGLVHPKKVFNFYNELHA-YLASCGVDGVKVDVQNIIETLGAGHGGR-VSLTRSYHQALEASIARNF 420 (774)
Q Consensus 347 ~~~~~~~~g----lglv~p~~~~~fyd~~~~-~Las~GVD~VKvD~q~~l~~l~~~~~g~-~~l~~ay~~AL~~s~~~~f 420 (774)
.... ..| +++.+|+ |..+|.+.++ ++.+.|||++|.|.+--... ..-+.-- -..+++.++++++. -
T Consensus 121 ~~~~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~Gvdg~w~D~~Ep~~~-~~~hN~y~~~~~~~~~~~~~~~----~ 192 (339)
T cd06602 121 IGKV--WPGYTVFPDFLNPN-TQEWWTDEIKDFHDQVPFDGLWIDMNEPSNF-YDVHNLYGLSEAIATYKALQSI----P 192 (339)
T ss_pred EEEe--CCCCCcCcCCCCHH-HHHHHHHHHHHHHhcCCCcEEEecCCCCchH-hhhcchhhHHHHHHHHHHHHhc----C
Confidence 0000 112 3566776 5556665555 56678999999998653211 0001000 11234445555432 2
Q ss_pred CCCcEEeeccCCCCCccccccccEEEecCCCCCCCcc
Q 004090 421 PDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPA 457 (774)
Q Consensus 421 ~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~ 457 (774)
..++.|.+-|.... ..+++. . -|.|....|..
T Consensus 193 ~~r~~~~sRs~~~G---~qry~~-~-w~GD~~s~W~~ 224 (339)
T cd06602 193 GKRPFVISRSTFPG---SGRYAG-H-WLGDNASTWED 224 (339)
T ss_pred CCCCEEEEecCccc---ccccce-e-ECCCccCCHHH
Confidence 34567777665321 123332 2 34555555553
No 29
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=98.29 E-value=7.8e-06 Score=89.62 Aligned_cols=147 Identities=16% Similarity=0.233 Sum_probs=92.0
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENS 272 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~ 272 (774)
+|.+.=++=.|.|. | -|++.|++.++.+++.+||...+.||++|++..++ ..| ...
T Consensus 6 pP~walG~~~sr~~-y---~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~-------------------f~~-d~~ 61 (317)
T cd06600 6 PPMWALGYHISRYS-Y---YPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRL-------------------FTW-DPY 61 (317)
T ss_pred CchHHHHHHhcCCC-C---CCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCc-------------------eee-chh
Confidence 44555556667765 2 37899999999999999999999999999864322 113 346
Q ss_pred cccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccc---cccccCCCCCCCCCCCcceec
Q 004090 273 KFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDT---ALAYPVTSPGVMGNQPDIVMD 349 (774)
Q Consensus 273 KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~---~~~~p~~spg~~~~~pd~~~~ 349 (774)
+|| ..+.+++++|+ .|+| +.+|..+. |.++... ..|+. +-.+-+...| .|... .
T Consensus 62 ~FP----------dp~~~i~~l~~-~g~k-~~~~~~P~-----i~~~~~~-~~~~~~~~~~~~v~~~~g----~~~~~-~ 118 (317)
T cd06600 62 RFP----------EPKKLIDELHK-RNVK-LVTIVDPG-----IRVDQNY-SPFLSGMDKGKFCEIESG----ELFVG-K 118 (317)
T ss_pred cCC----------CHHHHHHHHHH-CCCE-EEEEeecc-----ccCCCCC-hHHHHHHHCCEEEECCCC----CeEEE-e
Confidence 899 56999999999 6999 88898764 5544211 11211 1001011111 11100 0
Q ss_pred cccccc----CCccChHHHHHHHHHHHHH-HHhcCCCEEEEcccc
Q 004090 350 SLAVHG----LGLVHPKKVFNFYNELHAY-LASCGVDGVKVDVQN 389 (774)
Q Consensus 350 ~~~~~g----lglv~p~~~~~fyd~~~~~-Las~GVD~VKvD~q~ 389 (774)
...| +++.+|+. .++|.+.++. +.+.|||++|.|++-
T Consensus 119 --~w~G~~~~~Dftnp~a-~~ww~~~~~~~~~~~gvdg~w~D~~E 160 (317)
T cd06600 119 --MWPGTTVYPDFTNPDT-REWWAGLFSEWLNSQGVDGIWLDMNE 160 (317)
T ss_pred --ecCCCccccCCCChHH-HHHHHHHHHHHhhcCCCceEEeeCCC
Confidence 0123 34567764 5555555554 458999999999864
No 30
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=98.12 E-value=1.8e-05 Score=87.33 Aligned_cols=126 Identities=18% Similarity=0.240 Sum_probs=89.2
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 271 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 271 (774)
+|-|.=++-.|.|.- -|++.|++.++.+++.+||+..+.||+.|++..++ |. ..
T Consensus 6 pP~WalG~~qsr~~Y----~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~~---------------------Ft~d~ 60 (332)
T cd06601 6 KPRYALGFHQGCYGY----SNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRT---------------------FTTNG 60 (332)
T ss_pred CchHHhhhhhCCCCC----CCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCCc---------------------eeecC
Confidence 455555566677743 38999999999999999999999999999964332 44 34
Q ss_pred CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccc
Q 004090 272 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSL 351 (774)
Q Consensus 272 ~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~ 351 (774)
.+|| ..++++++||+ .|+| +.+|.-+. |. |.. .. ++. ..-||
T Consensus 61 ~~FP----------dp~~mv~~L~~-~G~k-lv~~i~P~-----i~--------~g~--~~----~~~-~~~pD------ 102 (332)
T cd06601 61 GGFP----------NPKEMFDNLHN-KGLK-CSTNITPV-----IS--------YGG--GL----GSP-GLYPD------ 102 (332)
T ss_pred CCCC----------CHHHHHHHHHH-CCCe-EEEEecCc-----ee--------cCc--cC----CCC-ceeeC------
Confidence 7899 46899999998 6998 56664432 21 110 01 110 11222
Q ss_pred ccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccc
Q 004090 352 AVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQ 388 (774)
Q Consensus 352 ~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q 388 (774)
+.+| +++++|.++++.|.+.|||+++.|++
T Consensus 103 ------ftnp-~ar~wW~~~~~~l~~~Gv~~~W~Dmn 132 (332)
T cd06601 103 ------LGRP-DVREWWGNQYKYLFDIGLEFVWQDMT 132 (332)
T ss_pred ------CCCH-HHHHHHHHHHHHHHhCCCceeecCCC
Confidence 3455 46778999999999999999999986
No 31
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=98.10 E-value=0.00019 Score=86.97 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=138.1
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEe
Q 004090 158 LVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIID 237 (774)
Q Consensus 158 ~v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIID 237 (774)
-.||-+|++|-+++++- ....+.. .-+|.|. || |.|-..+..-+|+.+.+.++..++..||+..+.+|
T Consensus 235 dyyv~~G~~~~~vi~~y----t~lTGkp-----~l~P~Wa--~G-~~~~~~~~~~~e~~v~~~i~~~~~~~IP~d~~~lD 302 (772)
T COG1501 235 DYYVIAGPTPKDVLEKY----TDLTGKP-----PLPPKWA--LG-WLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVLD 302 (772)
T ss_pred EEEEEeCCCHHHHHHHH----HHhhCCC-----CCCCcee--cC-CCceeccccccHHHHHHHHhhcccccCcceEEEEe
Confidence 48899999974443332 2222221 1245555 55 67777778889999999999999999999999999
Q ss_pred cc-cccccCCCCcccchhhccccccccccCCCcc-CCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCC
Q 004090 238 DG-WQQIENKPKEESNCIVQEGAQFASRLTGIKE-NSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGG 315 (774)
Q Consensus 238 DG-WQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgG 315 (774)
-. |-+. +..|+- ..+|| ..+.+++++|+ .|+| +-+|.-+.
T Consensus 303 ~~~~~~~---------------------~~~F~wd~~~FP----------~pk~mi~~l~~-~Gik-l~~~i~P~----- 344 (772)
T COG1501 303 IDFWMDN---------------------WGDFTWDPDRFP----------DPKQMIAELHE-KGIK-LIVIINPY----- 344 (772)
T ss_pred ehhhhcc---------------------ccceEECcccCC----------CHHHHHHHHHh-cCce-EEEEeccc-----
Confidence 86 7651 334553 47899 45899999999 6999 66776653
Q ss_pred cCCCCcccccccccccccCCCCCCCCCCCcceeccccccc--CCccChHHHHHHHH-HHHHHHHhcCCCEEEEccccchh
Q 004090 316 VKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG--LGLVHPKKVFNFYN-ELHAYLASCGVDGVKVDVQNIIE 392 (774)
Q Consensus 316 I~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~g--lglv~p~~~~~fyd-~~~~~Las~GVD~VKvD~q~~l~ 392 (774)
|..+.+..+.-..+-..-+...|. .+-++.+...+ ++..+|+ ++.+|- ..+..|.+-|||++|.|++--.-
T Consensus 345 i~~d~~~~~e~~~~Gy~~k~~~g~-----~~~~~~w~~~~a~~DFtnp~-~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp~~ 418 (772)
T COG1501 345 IKQDSPLFKEAIEKGYFVKDPDGE-----IYQADFWPGNSAFPDFTNPD-AREWWASDKKKNLLDLGVDGFWNDMNEPEP 418 (772)
T ss_pred cccCCchHHHHHHCCeEEECCCCC-----EeeecccCCcccccCCCCHH-HHHHHHHHHHhHHHhcCccEEEccCCCCcc
Confidence 555543322111111000111111 11122221111 2345665 666666 78889999999999999975432
Q ss_pred hcc--CCCCCch---------hHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccccccccEEEecCCCCCCCcc
Q 004090 393 TLG--AGHGGRV---------SLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPA 457 (774)
Q Consensus 393 ~l~--~~~~g~~---------~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~ 457 (774)
..+ .+.+... -.++++++|+++.. -..+.+|.+=|.+.-.- +.+.+| |.|.-..|..
T Consensus 419 ~~~~~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~---~~~r~~~lsRsg~aG~Q---~~~~~W--sGD~~s~wd~ 486 (772)
T COG1501 419 FDGDGFGNGIDHEEMHNLYPLLYAKAVYEALKELG---GNERPFILSRSGYAGSQ---RYAAHW--SGDNRSSWDS 486 (772)
T ss_pred ccccccccccCHHHHhcchhHHHHHHHHHHHHhhc---CCCceEEEEecccccce---ecccee--CCccccchHH
Confidence 211 1122221 23566677766542 12466777776543211 223333 5566666643
No 32
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=98.01 E-value=0.00027 Score=86.87 Aligned_cols=169 Identities=21% Similarity=0.326 Sum_probs=104.5
Q ss_pred EEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEeccc
Q 004090 161 THAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGW 240 (774)
Q Consensus 161 v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGW 240 (774)
..-|.+|-++|++-..+ .+.. .-+|.|.=++=+|.|. | -|++.|++.++.+++.+||...+.+|..|
T Consensus 160 ~G~gptp~eVi~~Yt~L----TGrp-----~mpP~WALGy~qSR~~-Y---~sq~eV~eva~~fre~~IP~DvIwlDidY 226 (978)
T PLN02763 160 FGPFPSPEALLTSLSHA----IGTV-----FMPPKWALGYQQCRWS-Y---ESAKRVAEIARTFREKKIPCDVVWMDIDY 226 (978)
T ss_pred ecCCCCHHHHHHHHHHH----hCCC-----CCCchHHhheeeccCC-C---CCHHHHHHHHHHHHHcCCCceEEEEehhh
Confidence 33346777776655443 2332 2356777667778885 2 37899999999999999999999999999
Q ss_pred ccccCCCCcccchhhccccccccccCCCc-cCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCC
Q 004090 241 QQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPA 319 (774)
Q Consensus 241 Q~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~ 319 (774)
+...+ .|. ..++|| ..+.+++++|+ .|+|. +|..-. ||..+
T Consensus 227 m~g~~---------------------~FTwD~~rFP----------dP~~mv~~Lh~-~G~kv--v~iidP----gI~~d 268 (978)
T PLN02763 227 MDGFR---------------------CFTFDKERFP----------DPKGLADDLHS-IGFKA--IWMLDP----GIKAE 268 (978)
T ss_pred hcCCC---------------------ceeECcccCC----------CHHHHHHHHHH-CCCEE--EEEEcC----CCccC
Confidence 75322 234 236899 56999999999 69994 443211 34433
Q ss_pred Cccccccccccc---ccCCCCCCCCCCCcceeccccccc----CCccChHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 004090 320 ADGMEHYDTALA---YPVTSPGVMGNQPDIVMDSLAVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 389 (774)
Q Consensus 320 ~~~~~~y~~~~~---~p~~spg~~~~~pd~~~~~~~~~g----lglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~ 389 (774)
. ....|+.... +-+...|. | +.- ..+.| .++.+| ++++||.++++.|.+.|||+++.|++-
T Consensus 269 ~-gY~~y~eg~~~~~fvk~~~G~----~-y~G--~vWpG~~~fpDFTnP-~ar~WW~~~~k~l~d~GVDG~W~DmnE 336 (978)
T PLN02763 269 E-GYFVYDSGCENDVWIQTADGK----P-FVG--EVWPGPCVFPDFTNK-KTRSWWANLVKDFVSNGVDGIWNDMNE 336 (978)
T ss_pred C-CCHHHHhHhhcCeeEECCCCC----e-eEe--eecCCCccccCCCCH-HHHHHHHHHHHHHhcCCCcEEEccCCC
Confidence 1 1112221100 00000010 0 000 00122 234555 478899999999999999999999964
No 33
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=98.00 E-value=1.7e-05 Score=87.70 Aligned_cols=146 Identities=17% Similarity=0.186 Sum_probs=92.3
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-EN 271 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n 271 (774)
+|.+.=++=+|.|.. -|++.|++.++.+++.+||+..+.||++|+...++ |. ..
T Consensus 6 pP~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~---------------------f~~d~ 60 (339)
T cd06603 6 PPLFSLGYHQCRWNY----KDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRY---------------------FTWDK 60 (339)
T ss_pred CchHHHHHHhcCCCC----CCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCc---------------------eEeCc
Confidence 456666666777642 48999999999999999999999999999854322 33 34
Q ss_pred CcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccc---cccCCCCCCCCCCCccee
Q 004090 272 SKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTAL---AYPVTSPGVMGNQPDIVM 348 (774)
Q Consensus 272 ~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~---~~p~~spg~~~~~pd~~~ 348 (774)
+||| ..+.+++++|+ .|+| +.+|..+. |.++. .-+.|+... .+.+...| .+ ...
T Consensus 61 ~~FP----------dp~~mi~~L~~-~G~k-~~~~~~P~-----v~~~~-~~~~y~e~~~~g~~vk~~~g----~~-~~~ 117 (339)
T cd06603 61 KKFP----------DPEKMQEKLAS-KGRK-LVTIVDPH-----IKRDD-GYYVYKEAKDKGYLVKNSDG----GD-FEG 117 (339)
T ss_pred ccCC----------CHHHHHHHHHH-CCCE-EEEEecCc-----eecCC-CCHHHHHHHHCCeEEECCCC----CE-EEE
Confidence 7899 56999999998 6999 78887764 44431 011122210 11111111 11 100
Q ss_pred ccccccc----CCccChHHHHHHHHHHHHHHH---hcCCCEEEEcccc
Q 004090 349 DSLAVHG----LGLVHPKKVFNFYNELHAYLA---SCGVDGVKVDVQN 389 (774)
Q Consensus 349 ~~~~~~g----lglv~p~~~~~fyd~~~~~La---s~GVD~VKvD~q~ 389 (774)
.. +.| +++.+|+ |.++|.+.++.+. +.|||+++.|++-
T Consensus 118 ~~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~~~g~~g~w~D~~E 162 (339)
T cd06603 118 WC--WPGSSSWPDFLNPE-VRDWWASLFSYDKYKGSTENLYIWNDMNE 162 (339)
T ss_pred EE--CCCCcCCccCCChh-HHHHHHHHHHHHhhcccCCCceEEeccCC
Confidence 00 122 3456675 5556666666554 4799999999864
No 34
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=97.92 E-value=9.7e-05 Score=79.11 Aligned_cols=127 Identities=20% Similarity=0.292 Sum_probs=80.0
Q ss_pred ccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCC
Q 004090 206 DAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVS 285 (774)
Q Consensus 206 daf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~ 285 (774)
..|...+|-+..++.+|-.++.|++ |++||+||.....+.. .++. ..-| ..
T Consensus 23 ~~~~~g~~t~~~k~yIDfAa~~G~e--YvlvD~GW~~~~~~~~-----------------~d~~--~~~~--------~~ 73 (273)
T PF10566_consen 23 VGFKHGATTETQKRYIDFAAEMGIE--YVLVDAGWYGWEKDDD-----------------FDFT--KPIP--------DF 73 (273)
T ss_dssp BSS-BSSSHHHHHHHHHHHHHTT-S--EEEEBTTCCGS--TTT-------------------TT---B-T--------T-
T ss_pred CCCcCCCCHHHHHHHHHHHHHcCCC--EEEecccccccccccc-----------------cccc--ccCC--------cc
Confidence 3455678999999999999999999 9999999987333321 0111 1111 14
Q ss_pred ChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHH
Q 004090 286 GLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVF 365 (774)
Q Consensus 286 GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~ 365 (774)
.|+.+|++.|+ .|++ |-+|-.-.++|+.. .| + -+
T Consensus 74 dl~elv~Ya~~-KgVg-i~lw~~~~~~~~~~--------~~-----------------------------------~-~~ 107 (273)
T PF10566_consen 74 DLPELVDYAKE-KGVG-IWLWYHSETGGNVA--------NL-----------------------------------E-KQ 107 (273)
T ss_dssp -HHHHHHHHHH-TT-E-EEEEEECCHTTBHH--------HH-----------------------------------H-CC
T ss_pred CHHHHHHHHHH-cCCC-EEEEEeCCcchhhH--------hH-----------------------------------H-HH
Confidence 79999999999 5988 77774432222110 00 0 11
Q ss_pred HHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHh
Q 004090 366 NFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIAR 418 (774)
Q Consensus 366 ~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~ 418 (774)
.++.++.+++|||.+||+|.... ......+-|++.++++...
T Consensus 108 --~~~~f~~~~~~Gv~GvKidF~~~---------d~Q~~v~~y~~i~~~AA~~ 149 (273)
T PF10566_consen 108 --LDEAFKLYAKWGVKGVKIDFMDR---------DDQEMVNWYEDILEDAAEY 149 (273)
T ss_dssp --HHHHHHHHHHCTEEEEEEE--SS---------TSHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHcCCCEEeeCcCCC---------CCHHHHHHHHHHHHHHHHc
Confidence 26677889999999999998652 2345677788888877544
No 35
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=96.36 E-value=0.12 Score=62.54 Aligned_cols=175 Identities=21% Similarity=0.332 Sum_probs=109.1
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEe
Q 004090 158 LVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIID 237 (774)
Q Consensus 158 ~v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIID 237 (774)
-+++=.|..|-.++.|-.+.+- . .-..|-|-=++--|-|. -.+.+.+++-++.+.+.|||..-..+|
T Consensus 267 D~y~flGptPe~vvqQy~q~iG----~-----P~m~pYWslGf~~~Rwg----Y~nls~~~dvv~~~~~agiPld~~~~D 333 (805)
T KOG1065|consen 267 DFYVFLGPTPEGVVQQYLQLIG----R-----PAMPPYWSLGFQLCRWG----YKNLSVVRDVVENYRAAGIPLDVIVID 333 (805)
T ss_pred EEEEecCCChHHHHHHHHHHhC----C-----ccCCchhhccceecccc----cccHHHHHHHHHHHHHcCCCcceeeee
Confidence 3566668888888888777542 1 11245555555556663 468889999999999999999999999
Q ss_pred cccccccCCCCcccchhhccccccccccCCCc-cCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCc
Q 004090 238 DGWQQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGV 316 (774)
Q Consensus 238 DGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI 316 (774)
+-|++..+| |. ...+|| +|+.+++.||+ .|+|+| +|.-+ +|
T Consensus 334 iDyMd~ykD---------------------FTvd~~~fp----------~~~~fv~~Lh~-~G~kyv-liidP-----~i 375 (805)
T KOG1065|consen 334 IDYMDGYKD---------------------FTVDKVWFP----------DLKDFVDDLHA-RGFKYV-LIIDP-----FI 375 (805)
T ss_pred hhhhhcccc---------------------eeeccccCc----------chHHHHHHHHh-CCCeEE-EEeCC-----cc
Confidence 999987655 33 336787 59999999999 799966 55444 25
Q ss_pred CCCCcccccccccc---cccCCCCCCCCCCCcceeccccccc----CCccChHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 004090 317 KPAADGMEHYDTAL---AYPVTSPGVMGNQPDIVMDSLAVHG----LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQN 389 (774)
Q Consensus 317 ~P~~~~~~~y~~~~---~~p~~spg~~~~~pd~~~~~~~~~g----lglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~ 389 (774)
+-++. ...|+... +.-..+-|. +++-.+. +.| .+.++|..+..+-+++.++=...++|+++.|+.-
T Consensus 376 s~~~~-y~~y~~g~~~~v~I~~~~g~----~~~lg~v--wP~~~~fpDftnp~~~~Ww~~~~~~fh~~vp~dg~wiDmnE 448 (805)
T KOG1065|consen 376 STNSS-YGPYDRGVAKDVLIKNREGS----PKMLGEV--WPGSTAFPDFTNPAVVEWWLDELKRFHDEVPFDGFWIDMNE 448 (805)
T ss_pred ccCcc-chhhhhhhhhceeeecccCc----hhhhccc--CCCcccccccCCchHHHHHHHHHHhhcccCCccceEEECCC
Confidence 44443 11122211 111111111 1100000 122 2356786555555555555456799999999965
Q ss_pred c
Q 004090 390 I 390 (774)
Q Consensus 390 ~ 390 (774)
.
T Consensus 449 ~ 449 (805)
T KOG1065|consen 449 P 449 (805)
T ss_pred c
Confidence 4
No 36
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=92.24 E-value=1.7 Score=47.99 Aligned_cols=130 Identities=17% Similarity=0.278 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEec--ccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHH
Q 004090 213 TAEGVDEGLKSLSAGGTPPKFLIIDD--GWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHV 290 (774)
Q Consensus 213 te~~I~~~l~~L~~~Gi~~~~vIIDD--GWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~ 290 (774)
+++.+.+.++.+++.++. .|+||= -+-.+.-+.+ ... .....+..++ ...++.+
T Consensus 11 ~~~~~~~~~~~i~~t~lN--avVIDvKdd~G~i~y~s~----------~~~---~~~~ga~~~~---------i~D~~~l 66 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELN--AVVIDVKDDDGNITYDSQ----------VPL---AREIGAVKPY---------IKDLKAL 66 (316)
T ss_pred CHHHHHHHHHHHHhcCCc--eEEEEEecCCceEEecCC----------Cch---hhhccccccc---------ccCHHHH
Confidence 567899999999999998 999972 1111111100 000 0011122222 2589999
Q ss_pred HHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccc------cccCCccCh--H
Q 004090 291 VDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA------VHGLGLVHP--K 362 (774)
Q Consensus 291 v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~------~~glglv~p--~ 362 (774)
++.+|+ +||. +--|... ++...+ ...+|+|++.... ..|...+|| +
T Consensus 67 ~~~l~e-~gIY-~IARIv~----------------FkD~~l--------a~~~pe~av~~~~G~~w~d~~~~~WvnP~~~ 120 (316)
T PF13200_consen 67 VKKLKE-HGIY-PIARIVV----------------FKDPVL--------AEAHPEWAVKTKDGSVWRDNEGEAWVNPYSK 120 (316)
T ss_pred HHHHHH-CCCE-EEEEEEE----------------ecChHH--------hhhChhhEEECCCCCcccCCCCCccCCCCCH
Confidence 999999 6875 3223222 221111 1235666663221 123445776 6
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEccccchh
Q 004090 363 KVFNFYNELHAYLASCGVDGVKVDVQNIIE 392 (774)
Q Consensus 363 ~~~~fyd~~~~~Las~GVD~VKvD~q~~l~ 392 (774)
.+.+|--++...+++.|||-|-.|-.++=+
T Consensus 121 evw~Y~i~IA~Eaa~~GFdEIqfDYIRFP~ 150 (316)
T PF13200_consen 121 EVWDYNIDIAKEAAKLGFDEIQFDYIRFPD 150 (316)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEeeeeecCC
Confidence 788999999999999999999999987533
No 37
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=90.06 E-value=10 Score=45.79 Aligned_cols=144 Identities=19% Similarity=0.223 Sum_probs=72.6
Q ss_pred cCCHHHHHHHH-HHHHhCCCCCcEEEE-ecccccccCCCCcccchhhccccccccccCC-CccCCcccccccCCCCCCCh
Q 004090 211 DVTAEGVDEGL-KSLSAGGTPPKFLII-DDGWQQIENKPKEESNCIVQEGAQFASRLTG-IKENSKFQKKCQNSEQVSGL 287 (774)
Q Consensus 211 ~vte~~I~~~l-~~L~~~Gi~~~~vII-DDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~n~KFp~~~~~~~~~~GL 287 (774)
.-|-.+|.+.+ +.|++.|+. .|.| --..+..... -|++ -.+ +..+.+|.+. ..|
T Consensus 152 ~g~~~~i~~~l~dyl~~LGvt--~i~L~Pi~e~~~~~~----------wGY~----~~~y~~~~~~~Gt~-------~dl 208 (613)
T TIGR01515 152 GLSYRELADQLIPYVKELGFT--HIELLPVAEHPFDGS----------WGYQ----VTGYYAPTSRFGTP-------DDF 208 (613)
T ss_pred CCCHHHHHHHHHHHHHHcCCC--EEEECCcccCCCCCC----------CCCC----cccCcccccccCCH-------HHH
Confidence 36778888886 999999998 4444 1111111000 0111 111 2234566532 589
Q ss_pred HHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHH
Q 004090 288 KHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNF 367 (774)
Q Consensus 288 k~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~f 367 (774)
|.+|+.+|+ .||+ |-+...+.= ..++...+..+...-.|....+ .....+.|.. .-+.+-+| .+++|
T Consensus 209 k~lV~~~H~-~Gi~-VilD~V~NH----~~~~~~~~~~~~~~~~y~~~~~-~~~~~~~w~~-----~~~~~~~~-~Vr~~ 275 (613)
T TIGR01515 209 MYFVDACHQ-AGIG-VILDWVPGH----FPKDDHGLAEFDGTPLYEHKDP-RDGEHWDWGT-----LIFDYGRP-EVRNF 275 (613)
T ss_pred HHHHHHHHH-CCCE-EEEEecccC----cCCccchhhccCCCcceeccCC-ccCcCCCCCC-----ceecCCCH-HHHHH
Confidence 999999999 6999 777755420 1122211111111100100000 0011121110 01233345 56666
Q ss_pred HHHHHHHH-HhcCCCEEEEccccc
Q 004090 368 YNELHAYL-ASCGVDGVKVDVQNI 390 (774)
Q Consensus 368 yd~~~~~L-as~GVD~VKvD~q~~ 390 (774)
.-+...++ .+.||||+.+|+...
T Consensus 276 l~~~~~~W~~ey~iDG~R~D~v~~ 299 (613)
T TIGR01515 276 LVANALYWAEFYHIDGLRVDAVAS 299 (613)
T ss_pred HHHHHHHHHHHhCCcEEEEcCHHH
Confidence 66666665 568999999998643
No 38
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=83.35 E-value=18 Score=39.03 Aligned_cols=160 Identities=17% Similarity=0.197 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHHHH
Q 004090 213 TAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVD 292 (774)
Q Consensus 213 te~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~v~ 292 (774)
+...+.+.++..++..+|.+|+|-+||.+... ..|+.+++
T Consensus 43 ~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y----------------------------------------~~l~~~~~ 82 (261)
T cd06596 43 TTDDARKVADKYKENDMPLGWMLPNDGYGCGY----------------------------------------ENLKEVVD 82 (261)
T ss_pred chhhHHHHHHHHHhcCCCceeeccCCCCcchH----------------------------------------HHHHHHHH
Confidence 34458889999999999999999999987531 14899999
Q ss_pred HHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHHHHHHH
Q 004090 293 ESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELH 372 (774)
Q Consensus 293 ~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~fyd~~~ 372 (774)
++++ .|++ .|+| ....+ +++.
T Consensus 83 ~~~~-~g~~-~glw-----------t~~~l----------------------------------------------~~~~ 103 (261)
T cd06596 83 YLHA-NGVE-TGLW-----------TQSGL----------------------------------------------RDIA 103 (261)
T ss_pred HHHH-cCCc-cccc-----------cccch----------------------------------------------hhhh
Confidence 9998 7998 6666 11111 1111
Q ss_pred HHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccccccccEEEecCCCC
Q 004090 373 AYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYY 452 (774)
Q Consensus 373 ~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~ 452 (774)
......|+.+.|+|+... +.++.=.....++.++++++. -..|++|.+.|.+.-. .+++.. =|.|..
T Consensus 104 ~ev~~~g~~~~k~Dv~w~----g~gy~~~l~~~ka~yeg~~~~----~~~RpfiltRsg~aGs---QRy~~~--WsGD~~ 170 (261)
T cd06596 104 KEVGAAGVRARKTDVAWV----GAGYSFALNGVKAAADGIESN----SNARPFIVTVDGWAGT---QRYAGI--WTGDQS 170 (261)
T ss_pred hhhccCCceEEeccchhh----ccchhHHHHHHHHHHHHHHhC----CCCCCEEEEecCcccc---CCCCCc--cCCCCc
Confidence 123557999999999763 223221224455666666542 2356788777754311 233332 366777
Q ss_pred CCCccchhhHHHHHHhhhhhccC-CCCCCCccccC
Q 004090 453 PRDPASHTIHISSVAYNTLFLGE-FMQPDWDMFHS 486 (774)
Q Consensus 453 p~~p~~~~~hi~~na~nsl~~g~-~~~PDwDMf~s 486 (774)
..|..+. .+|.... +.-+.|. +.-+|.+=|.-
T Consensus 171 stWe~Lr-~sI~~~L-~~gLsG~p~~G~DIGGF~g 203 (261)
T cd06596 171 GSWEYIR-FHIPTYI-GSGLSGQPNTTSDVDGIFG 203 (261)
T ss_pred CcHHHHH-HHHHHHH-HHHhcCCCcCccccCcCCC
Confidence 6775432 3443322 2223333 34556555543
No 39
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=75.23 E-value=44 Score=36.88 Aligned_cols=143 Identities=17% Similarity=0.251 Sum_probs=72.2
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCCccccccc-CCCCCCChHHHH
Q 004090 213 TAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQ-NSEQVSGLKHVV 291 (774)
Q Consensus 213 te~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~-~~~~~~GLk~~v 291 (774)
+++++.+.++.|++.|+. .|+++=-+. ++ . -+... +.+-.++..+.. ....-.=|+.+|
T Consensus 17 ~~~~~~~~l~~l~~~~~N--~V~~qVr~~---gd----a--------~Y~S~---~~p~s~~~~g~~~~~pg~DpL~~~I 76 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFN--AVFVQVRPR---GD----A--------LYPSD---IEPWSGYLTGKQGKDPGFDPLEFMI 76 (311)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEEEEeC---cE----E--------Eeccc---ccccccccCCCCCCCCCccHHHHHH
Confidence 899999999999999987 666643221 11 0 00000 111111110000 000012389999
Q ss_pred HHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccc-cccCCccCh--HHHHHHH
Q 004090 292 DESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLA-VHGLGLVHP--KKVFNFY 368 (774)
Q Consensus 292 ~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~-~~glglv~p--~~~~~fy 368 (774)
++.|+ .||+ |.-|..+. .. -.+.+...++... ....+++++...... .++....|| +++++|.
T Consensus 77 ~eaHk-rGle-vHAW~~~~-~~--~~~~~~~~~~~p~---------~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i 142 (311)
T PF02638_consen 77 EEAHK-RGLE-VHAWFRVG-FN--APDVSHILKKHPE---------WFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYI 142 (311)
T ss_pred HHHHH-cCCE-EEEEEEee-cC--CCchhhhhhcCch---------hheecCCCceeecccCCCCceEECCCCHHHHHHH
Confidence 99998 6999 87887331 00 0011111111111 111123443322111 122234454 4678888
Q ss_pred HHHHHHH-HhcCCCEEEEcccc
Q 004090 369 NELHAYL-ASCGVDGVKVDVQN 389 (774)
Q Consensus 369 d~~~~~L-as~GVD~VKvD~q~ 389 (774)
-++..-+ ....||||-.|...
T Consensus 143 ~~~v~Eiv~~YdvDGIhlDdy~ 164 (311)
T PF02638_consen 143 IDIVKEIVKNYDVDGIHLDDYF 164 (311)
T ss_pred HHHHHHHHhcCCCCeEEecccc
Confidence 7777665 57899999999644
No 40
>PRK12568 glycogen branching enzyme; Provisional
Probab=71.11 E-value=43 Score=41.28 Aligned_cols=141 Identities=21% Similarity=0.338 Sum_probs=69.8
Q ss_pred cCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceec
Q 004090 270 ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMD 349 (774)
Q Consensus 270 ~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~ 349 (774)
.+.+|.+. ..||.+|+.+|+ .||+-|-=|.- .-..++..+...++..-.|-...| ..+.+++|.-
T Consensus 311 ~~~~~G~~-------~dfk~lV~~~H~-~Gi~VIlD~V~-----nH~~~d~~~l~~fdg~~~Ye~~d~-~~g~~~~W~~- 375 (730)
T PRK12568 311 PTARHGSP-------DGFAQFVDACHR-AGIGVILDWVS-----AHFPDDAHGLAQFDGAALYEHADP-REGMHRDWNT- 375 (730)
T ss_pred cCcccCCH-------HHHHHHHHHHHH-CCCEEEEEecc-----ccCCccccccccCCCccccccCCC-cCCccCCCCC-
Confidence 45666533 689999999999 69884433311 011122111111211111100000 0112333310
Q ss_pred ccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhc----------cCCCCCchhH-HHHHHHHHHHHHHh
Q 004090 350 SLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETL----------GAGHGGRVSL-TRSYHQALEASIAR 418 (774)
Q Consensus 350 ~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l----------~~~~~g~~~l-~~ay~~AL~~s~~~ 418 (774)
. -+.+-+|+..+.+.+.+.-.+.+.||||+-+|+-..+-.+ ...++++..+ +..+-+.|...+.+
T Consensus 376 -~---~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~ 451 (730)
T PRK12568 376 -L---IYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIAS 451 (730)
T ss_pred -e---ecccCCHHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHH
Confidence 0 1344566544444445555556789999999976543221 1112333322 34566777777777
Q ss_pred cCCCCcEEeec
Q 004090 419 NFPDNGCISCM 429 (774)
Q Consensus 419 ~f~g~~iI~cM 429 (774)
.+|+.-+|.=.
T Consensus 452 ~~P~~~~IAEe 462 (730)
T PRK12568 452 QFPGVLTIAEE 462 (730)
T ss_pred HCCCeEEEEEc
Confidence 78866555544
No 41
>PRK10785 maltodextrin glucosidase; Provisional
Probab=71.05 E-value=55 Score=39.47 Aligned_cols=64 Identities=13% Similarity=0.174 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cCCcccccccCCCCCCChHHHH
Q 004090 213 TAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKFQKKCQNSEQVSGLKHVV 291 (774)
Q Consensus 213 te~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KFp~~~~~~~~~~GLk~~v 291 (774)
+=++|.+.|+.|+++|+. .|-| ..-.... +.....-.++. -+..|.+. ..|+.+|
T Consensus 177 Dl~GI~~kLdYL~~LGv~--~I~L-----~Pif~s~----------s~hgYd~~Dy~~iDp~~Gt~-------~df~~Lv 232 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVT--ALYL-----NPIFTAP----------SVHKYDTEDYRHVDPQLGGD-------AALLRLR 232 (598)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEe-----CCcccCC----------CCCCcCcccccccCcccCCH-------HHHHHHH
Confidence 568999999999999998 3322 2211110 00000112233 24455432 5899999
Q ss_pred HHHHhcCCCc
Q 004090 292 DESKQNHNVK 301 (774)
Q Consensus 292 ~~Ik~~~Glk 301 (774)
+++|+ .|||
T Consensus 233 ~~aH~-rGik 241 (598)
T PRK10785 233 HATQQ-RGMR 241 (598)
T ss_pred HHHHH-CCCE
Confidence 99999 6999
No 42
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=70.08 E-value=31 Score=41.82 Aligned_cols=103 Identities=20% Similarity=0.342 Sum_probs=68.2
Q ss_pred eEEEEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccc--cccccccccCCHHHHHHHHHHHHhCCCCCcEE
Q 004090 157 YLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGW--CTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFL 234 (774)
Q Consensus 157 ~~v~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGW--CTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~v 234 (774)
--|++-.|.+|-+++++--++ .++ ..+|.++. +|| |-||- .+|+.|++-=+.+.+..+|+..+
T Consensus 327 iDvFi~lGP~~~Dv~~qyaaL----TG~------~~LPplFs-iGYHQcRWNY----~DE~DV~~Vd~~FDehdiP~Dvi 391 (915)
T KOG1066|consen 327 IDVFIFLGPKPSDVFRQYAAL----TGT------TPLPPLFS-IGYHQCRWNY----NDEEDVLTVDQGFDEHDIPYDVI 391 (915)
T ss_pred EEEEEEeCCChhHHHHHHHhh----cCC------CCCCchhh-cchhhccccc----cchhhhhhhhcCccccCCccceE
Confidence 347888899987776654332 222 34666553 666 88873 57888998888999999997766
Q ss_pred EEecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEE
Q 004090 235 IIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYV 305 (774)
Q Consensus 235 IIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgv 305 (774)
=+|--.-+..+ .-.| +..|||.+ +.+++++.+ .|=|.|.+
T Consensus 392 WLDIEhtdgKr-------------------YFTW-Dk~~FP~P----------~~Ml~kLa~-kgRklV~I 431 (915)
T KOG1066|consen 392 WLDIEHTDGKR-------------------YFTW-DKHKFPNP----------KDMLKKLAS-KGRKLVTI 431 (915)
T ss_pred EEeeeecCCce-------------------eEee-ccccCCCH----------HHHHHHHHh-cCCceEEE
Confidence 55543332221 2113 45899965 888999998 47665543
No 43
>PRK14705 glycogen branching enzyme; Provisional
Probab=65.20 E-value=53 Score=42.86 Aligned_cols=141 Identities=22% Similarity=0.322 Sum_probs=70.0
Q ss_pred cCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceec
Q 004090 270 ENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMD 349 (774)
Q Consensus 270 ~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~ 349 (774)
.+.+|-. +.+||.+|+.+|+ .||+-|-=|.- + -..++......++..-.| .+.....+.+++|--.
T Consensus 807 p~~ryGt-------~~dfk~lVd~~H~-~GI~VILD~V~-n----H~~~d~~~l~~fdg~~~y-~~~d~~~g~~~~Wg~~ 872 (1224)
T PRK14705 807 PTSRFGH-------PDEFRFLVDSLHQ-AGIGVLLDWVP-A----HFPKDSWALAQFDGQPLY-EHADPALGEHPDWGTL 872 (1224)
T ss_pred cCcccCC-------HHHHHHHHHHHHH-CCCEEEEEecc-c----cCCcchhhhhhcCCCccc-ccCCcccCCCCCCCCc
Confidence 4566653 3699999999999 69884433311 0 011221111111111011 0000111334544210
Q ss_pred ccccccCCccChHHHHHHHHHHHHH-HHhcCCCEEEEccccchhhc----------cCCCCCchhH-HHHHHHHHHHHHH
Q 004090 350 SLAVHGLGLVHPKKVFNFYNELHAY-LASCGVDGVKVDVQNIIETL----------GAGHGGRVSL-TRSYHQALEASIA 417 (774)
Q Consensus 350 ~~~~~glglv~p~~~~~fyd~~~~~-Las~GVD~VKvD~q~~l~~l----------~~~~~g~~~l-~~ay~~AL~~s~~ 417 (774)
-+.+-+| .++.|.-+-..| +.+.+|||+-+|+...+-++ ...++|+..+ +-.+.+-|.+.+.
T Consensus 873 -----~fn~~~~-eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~~gg~en~~ai~fl~~ln~~v~ 946 (1224)
T PRK14705 873 -----IFDFGRT-EVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNRFGGRENLEAISFLQEVNATVY 946 (1224)
T ss_pred -----eecCCCH-HHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccccCCccChHHHHHHHHHHHHHH
Confidence 0233345 466666555555 56789999999996544221 1123444322 3446666666676
Q ss_pred hcCCCCcEEeecc
Q 004090 418 RNFPDNGCISCMC 430 (774)
Q Consensus 418 ~~f~g~~iI~cMs 430 (774)
+.+|+.-+|.=-+
T Consensus 947 ~~~p~~~~IAEes 959 (1224)
T PRK14705 947 KTHPGAVMIAEES 959 (1224)
T ss_pred HHCCCeEEEEEcC
Confidence 7777654554433
No 44
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=65.18 E-value=66 Score=38.44 Aligned_cols=35 Identities=31% Similarity=0.523 Sum_probs=26.5
Q ss_pred CccChHHHHHHHHHHHHHHHhcCCCEEEEccccchh
Q 004090 357 GLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIE 392 (774)
Q Consensus 357 glv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~ 392 (774)
.+-+| .++++..+..+++.+.||||+-+|+...+.
T Consensus 172 n~~np-~V~~~l~~~~~~W~~~GvDGfRlDa~~~i~ 206 (551)
T PRK10933 172 NWENP-AVRAELKKVCEFWADRGVDGLRLDVVNLIS 206 (551)
T ss_pred CCCCH-HHHHHHHHHHHHHHHCCCcEEEEcchhhcC
Confidence 34455 466677778888889999999999877653
No 45
>PRK14706 glycogen branching enzyme; Provisional
Probab=61.47 E-value=74 Score=38.76 Aligned_cols=70 Identities=21% Similarity=0.199 Sum_probs=42.3
Q ss_pred CccChHHHHHHHHHHHHHH-HhcCCCEEEEccccchhhc--------cCCCCCchh-HHHHHHHHHHHHHHhcCCCCcEE
Q 004090 357 GLVHPKKVFNFYNELHAYL-ASCGVDGVKVDVQNIIETL--------GAGHGGRVS-LTRSYHQALEASIARNFPDNGCI 426 (774)
Q Consensus 357 glv~p~~~~~fyd~~~~~L-as~GVD~VKvD~q~~l~~l--------~~~~~g~~~-l~~ay~~AL~~s~~~~f~g~~iI 426 (774)
.+-+| .+++|.-+-..|+ .+.+|||+-+|+...+..+ ...++++.. .+-.+-+.|...+.+.+|+.-+|
T Consensus 277 ~~~~~-eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~~n~~a~~fl~~ln~~v~~~~p~~~~i 355 (639)
T PRK14706 277 DYGRN-EVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHGGRENLEAIAFLKRLNEVTHHMAPGCMMI 355 (639)
T ss_pred CCCCH-HHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCcccccccccCCcccHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 34455 4666665555554 6899999999986543221 112334332 35567777777777777755455
Q ss_pred e
Q 004090 427 S 427 (774)
Q Consensus 427 ~ 427 (774)
.
T Consensus 356 A 356 (639)
T PRK14706 356 A 356 (639)
T ss_pred E
Confidence 4
No 46
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=61.29 E-value=2.3e+02 Score=33.70 Aligned_cols=69 Identities=17% Similarity=0.345 Sum_probs=38.0
Q ss_pred CccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhc-cCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEe
Q 004090 357 GLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETL-GAGHGGRVSLTRSYHQALEASIARNFPDNGCIS 427 (774)
Q Consensus 357 glv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l-~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~ 427 (774)
.+-+|+ ++++.-+..+++.+.||||+-+|+...+..- +...... .....+-+.+.+.+.+..++.-+|.
T Consensus 169 n~~np~-vr~~l~~~~~~w~~~GvDGfRlDav~~~~~~~~~~~~~~-p~~~~f~~~~~~~v~~~~p~~~~ia 238 (539)
T TIGR02456 169 NYDNPA-VHDAVHDVMRFWLDLGVDGFRLDAVPYLYEREGTSCENL-PETHEFLKRLRKMVDREYPGRMLLA 238 (539)
T ss_pred CCCCHH-HHHHHHHHHHHHHHcCCCEEEEecHHhhhccCCCccCCC-chHHHHHHHHHHHHHHhCCCeEEEE
Confidence 344554 6666667777777899999999986544211 0000011 1123444555555555556544444
No 47
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside []. It is a widely distributed fold which has been found in many enzyme families that catalyse completely unrelated reactions []. The active site is always found at the C-terminal end of this domain. Proteins in this entry are a variety of NADH:flavin oxidoreductase/NADH oxidase enzymes, found mostly in bacteria or fungi, that contain a TIM-barrel fold. They commonly use FMN/FAD as cofactor and include: dimethylamine dehydrogenase trimethylamine dehydrogenase 12-oxophytodienoate reductase NADPH dehydrogenase NADH oxidase ; GO: 0010181 FMN binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GKA_B 3P67_A 3F03_K 2ABA_A 1VYR_A 1GVO_A 3KFT_B 3P8I_A 1GVQ_A 3P74_A ....
Probab=60.30 E-value=92 Score=34.72 Aligned_cols=134 Identities=19% Similarity=0.335 Sum_probs=66.5
Q ss_pred CCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHHH
Q 004090 212 VTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVV 291 (774)
Q Consensus 212 vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~v 291 (774)
++++...+.....+++|+- .+|+..--=+.... .+...+. +..++.. .|+|.++
T Consensus 33 ~~~~~~~~yy~~rA~GG~G--lii~~~~~v~~~~~-------------~~~~~~~-i~~d~~i----------~~~k~l~ 86 (341)
T PF00724_consen 33 VPTDRLIAYYERRAKGGAG--LIITEATAVSPEGR-------------GFPGQPG-IWDDEQI----------PGLKKLA 86 (341)
T ss_dssp BCHHHHHHHHHHHHHTTTS--EEEEEEEESSGGGS-------------SSTTSEB-SSSHHHH----------HHHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCc--eEEecccccccccc-------------cccccch-hchhhHH----------HHHHHHH
Confidence 7888999999999999976 77775422111111 1111111 1111222 4899999
Q ss_pred HHHHhcCCCc-EEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceeccccccc--CCccChHHHHHHH
Q 004090 292 DESKQNHNVK-YVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG--LGLVHPKKVFNFY 368 (774)
Q Consensus 292 ~~Ik~~~Glk-~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~g--lglv~p~~~~~fy 368 (774)
+.||+ +|-| .+=+||+ |.+.. |.... ... .-|...... ...... .+ .--...+++++.-
T Consensus 87 ~~vh~-~Ga~i~~QL~H~--G~~~~--~~~~~---~~~--~~psa~~~~-~~~~~~-------~~~~~~~mt~~eI~~ii 148 (341)
T PF00724_consen 87 DAVHA-HGAKIIAQLWHA--GRQAN--PEYSG---DPP--VGPSAPSAL-PSPIKF-------MGYPPREMTEEEIEEII 148 (341)
T ss_dssp HHHHH-TTSEEEEEEE----GGGSS--GCCSG---GGC--EESSCSSSS-STTTTE-------TSCEEEE--HHHHHHHH
T ss_pred HHHHh-cCccceeecccc--ccccC--cccCC---CCc--cCccccccc-Cccccc-------CCCCCeeCCHHHHHHHH
Confidence 99999 7955 3446886 44432 21111 000 011100000 000000 00 0012356777776
Q ss_pred HHHHH---HHHhcCCCEEEEcccc
Q 004090 369 NELHA---YLASCGVDGVKVDVQN 389 (774)
Q Consensus 369 d~~~~---~Las~GVD~VKvD~q~ 389 (774)
++|-. ...++|+|+|.+-+.+
T Consensus 149 ~~f~~AA~~A~~AGfDGVEIH~ah 172 (341)
T PF00724_consen 149 EDFAQAARRAKEAGFDGVEIHAAH 172 (341)
T ss_dssp HHHHHHHHHHHHTT-SEEEEEEST
T ss_pred HHHHHHHHHHHHhccCeEeecccc
Confidence 66643 5677999999998864
No 48
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=58.04 E-value=2.2e+02 Score=33.93 Aligned_cols=29 Identities=24% Similarity=0.411 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHH-HHhcCCCEEEEccccch
Q 004090 363 KVFNFYNELHAY-LASCGVDGVKVDVQNII 391 (774)
Q Consensus 363 ~~~~fyd~~~~~-Las~GVD~VKvD~q~~l 391 (774)
.+++|.-+...+ +.+.||||+-+|+...+
T Consensus 220 ~vr~~i~~~~~~W~~e~~iDGfR~D~~~~~ 249 (542)
T TIGR02402 220 EVRRYILDNALYWLREYHFDGLRLDAVHAI 249 (542)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeCHHHh
Confidence 555565554454 56789999999986543
No 49
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=57.49 E-value=62 Score=39.20 Aligned_cols=143 Identities=21% Similarity=0.280 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHhCCCC-CcEEEE-----ecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCC
Q 004090 212 VTAEGVDEGLKSLSAGGTP-PKFLII-----DDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVS 285 (774)
Q Consensus 212 vte~~I~~~l~~L~~~Gi~-~~~vII-----DDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~ 285 (774)
=+-+...+-+.-|++.|+. ++++=| |=+| |+|- .+=+-+.++|-+ |.
T Consensus 162 ~~~e~a~~llpYl~elG~T~IELMPv~e~p~~~sW-----------------GYq~---~g~yAp~sryGt-------Pe 214 (628)
T COG0296 162 GYFELAIELLPYLKELGITHIELMPVAEHPGDRSW-----------------GYQG---TGYYAPTSRYGT-------PE 214 (628)
T ss_pred CHHHHHHHHhHHHHHhCCCEEEEcccccCCCCCCC-----------------CCCc---ceeccccccCCC-------HH
Confidence 3557788889999999987 233222 1112 1111 011223456653 47
Q ss_pred ChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHH
Q 004090 286 GLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVF 365 (774)
Q Consensus 286 GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~ 365 (774)
+||++|+..|+ .||--|-=|. . +=..|++.....|.....+.-..|. .+.+++|-. .+.-.....|+
T Consensus 215 dfk~fVD~aH~-~GIgViLD~V--~---~HF~~d~~~L~~fdg~~~~e~~~~~-~~~~~~Wg~------~i~~~gr~EVR 281 (628)
T COG0296 215 DFKALVDAAHQ-AGIGVILDWV--P---NHFPPDGNYLARFDGTFLYEHEDPR-RGEHTDWGT------AIFNYGRNEVR 281 (628)
T ss_pred HHHHHHHHHHH-cCCEEEEEec--C---CcCCCCcchhhhcCCccccccCCcc-cccCCCccc------chhccCcHHHH
Confidence 99999999999 7865222231 1 1123666566666655444322222 344565531 11111134566
Q ss_pred HHH-HHHHHHHHhcCCCEEEEccccchhhc
Q 004090 366 NFY-NELHAYLASCGVDGVKVDVQNIIETL 394 (774)
Q Consensus 366 ~fy-d~~~~~Las~GVD~VKvD~q~~l~~l 394 (774)
.|+ +...-.|.+..|||+-+|+...+..+
T Consensus 282 ~Fll~nal~Wl~~yHiDGlRvDAV~smly~ 311 (628)
T COG0296 282 NFLLANALYWLEEYHIDGLRVDAVASMLYL 311 (628)
T ss_pred HHHHHHHHHHHHHhCCcceeeehhhhhhcc
Confidence 665 45555678899999999998765443
No 50
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.
Probab=57.24 E-value=84 Score=34.83 Aligned_cols=73 Identities=21% Similarity=0.171 Sum_probs=41.8
Q ss_pred cCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHH
Q 004090 211 DVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHV 290 (774)
Q Consensus 211 ~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~ 290 (774)
.+|+ ...+..+..+++|+- .+|+-...-+..... +.+.+. +..++.. .+|+.+
T Consensus 30 ~~~~-~~~~~y~~rA~gg~g--lii~~~~~v~~~~~~-------------~~~~~~-~~~d~~~----------~~~~~l 82 (336)
T cd02932 30 VATD-WHLVHYGSRALGGAG--LVIVEATAVSPEGRI-------------TPGDLG-LWNDEQI----------EALKRI 82 (336)
T ss_pred CCCH-HHHHHHHHHHcCCCc--EEEEcceEECCCcCC-------------CCCcee-ecCHHHH----------HHHHHH
Confidence 3554 556777778888876 766654433221110 001111 1112223 489999
Q ss_pred HHHHHhcCCCc-EEEEEeeccccc
Q 004090 291 VDESKQNHNVK-YVYVWHALAGYW 313 (774)
Q Consensus 291 v~~Ik~~~Glk-~vgvWhal~GYW 313 (774)
++.+|+ +|-+ .+=+||+ |.+
T Consensus 83 ~~~vh~-~G~~~~~QL~H~--G~~ 103 (336)
T cd02932 83 VDFIHS-QGAKIGIQLAHA--GRK 103 (336)
T ss_pred HHHHHh-cCCcEEEEccCC--CcC
Confidence 999999 7855 5667884 544
No 51
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
Probab=56.08 E-value=97 Score=34.03 Aligned_cols=64 Identities=17% Similarity=0.266 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccC
Q 004090 361 PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCH 431 (774)
Q Consensus 361 p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~ 431 (774)
++....|.+.+.+++.++|+|||=+|..... ...+.......|.++|++ +++.++ .+.+.+|++
T Consensus 92 ~~~~~~fa~sl~~~~~~~g~DGiDiD~E~~~-----~~~~~~~~~~~~~~~lk~-lr~~~~-~~~~lT~AP 155 (312)
T cd02871 92 TAQEDNFVDSIVAIIKEYGFDGLDIDLESGS-----NPLNATPVITNLISALKQ-LKDHYG-PNFILTMAP 155 (312)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEecccCC-----ccCCcHHHHHHHHHHHHH-HHHHcC-CCeEEEECC
Confidence 5678899999999999999999999986631 111112334455555553 455554 357777774
No 52
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=54.20 E-value=1.5e+02 Score=33.07 Aligned_cols=73 Identities=12% Similarity=0.195 Sum_probs=41.7
Q ss_pred cCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHH
Q 004090 211 DVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHV 290 (774)
Q Consensus 211 ~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~ 290 (774)
.+|+ ..++.-...+++|+- .+|....+-+...... .+.+.-+. +++= .+|+.+
T Consensus 30 ~~t~-~~~~~y~~~A~gG~G--lIi~e~~~v~~~~~~~-------------~~~~~l~~--d~~i---------~~~~~l 82 (343)
T cd04734 30 LPSE-RYIAYHEERARGGAG--LIITEGSSVHPSDSPA-------------FGNLNASD--DEII---------PGFRRL 82 (343)
T ss_pred CCCH-HHHHHHHHHHhCCCC--EEEEeeeeeCCcccCC-------------CCccccCC--HHHH---------HHHHHH
Confidence 4565 455667778888876 7777555433221110 01111111 2221 499999
Q ss_pred HHHHHhcCCCc-EEEEEeeccccc
Q 004090 291 VDESKQNHNVK-YVYVWHALAGYW 313 (774)
Q Consensus 291 v~~Ik~~~Glk-~vgvWhal~GYW 313 (774)
++.+|+ +|-+ .+=+||+ |++
T Consensus 83 ~~~vh~-~g~~~~~Ql~H~--G~~ 103 (343)
T cd04734 83 AEAVHA-HGAVIMIQLTHL--GRR 103 (343)
T ss_pred HHHHHh-cCCeEEEeccCC--CcC
Confidence 999999 7844 4667885 555
No 53
>PRK05402 glycogen branching enzyme; Provisional
Probab=53.41 E-value=4e+02 Score=33.05 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=21.1
Q ss_pred CccChHHHHHHHHHHHHH-HHhcCCCEEEEcccc
Q 004090 357 GLVHPKKVFNFYNELHAY-LASCGVDGVKVDVQN 389 (774)
Q Consensus 357 glv~p~~~~~fyd~~~~~-Las~GVD~VKvD~q~ 389 (774)
.+-+|+ +++|.-+...+ +.+.||||+-+|+..
T Consensus 375 n~~~~~-v~~~l~~~~~~W~~e~~iDG~R~D~v~ 407 (726)
T PRK05402 375 NYGRNE-VRNFLVANALYWLEEFHIDGLRVDAVA 407 (726)
T ss_pred cCCCHH-HHHHHHHHHHHHHHHhCCcEEEECCHH
Confidence 344565 55555444555 567899999999753
No 54
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=53.29 E-value=2.1e+02 Score=35.15 Aligned_cols=92 Identities=16% Similarity=0.267 Sum_probs=56.1
Q ss_pred CChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHH
Q 004090 285 SGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKV 364 (774)
Q Consensus 285 ~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~ 364 (774)
.++.++.=.|+.+.|+| |+-|..+.. |. +.+..+..+.++ +...|. ..+|+| ..++.--+| .+
T Consensus 380 d~f~~~aw~l~~r~~v~-v~AWmp~~~-~~-~~~~~~~~~~~~-----~~~~~~--~~~~~~------~~rl~P~~p-e~ 442 (671)
T PRK14582 380 DLFNRVAWQLRTRAGVN-VYAWMPVLS-FD-LDPTLPRVKRLD-----TGEGKA--QIHPEQ------YRRLSPFDD-RV 442 (671)
T ss_pred CCcCHHHHHHHHhhCCE-EEEecccee-ec-cCCCcchhhhcc-----ccCCcc--ccCCCC------CcCCCCCCH-HH
Confidence 57888888887778998 999988754 21 112111111111 111121 224554 122333445 57
Q ss_pred HHHHHHHHHHHHh-cCCCEEEEccccchhh
Q 004090 365 FNFYNELHAYLAS-CGVDGVKVDVQNIIET 393 (774)
Q Consensus 365 ~~fyd~~~~~Las-~GVD~VKvD~q~~l~~ 393 (774)
+++..+++.-|+. +.||||-.|.-..+..
T Consensus 443 r~~i~~i~~dla~~~~~dGilf~Dd~~l~d 472 (671)
T PRK14582 443 RAQVGMLYEDLAGHAAFDGILFHDDAVLSD 472 (671)
T ss_pred HHHHHHHHHHHHHhCCCceEEecccccccc
Confidence 8888999988887 5999999999876643
No 55
>PRK12313 glycogen branching enzyme; Provisional
Probab=43.74 E-value=6.1e+02 Score=30.83 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=21.2
Q ss_pred CccChHHHHHHHHHHHHH-HHhcCCCEEEEcccc
Q 004090 357 GLVHPKKVFNFYNELHAY-LASCGVDGVKVDVQN 389 (774)
Q Consensus 357 glv~p~~~~~fyd~~~~~-Las~GVD~VKvD~q~ 389 (774)
.+-+|+ ++.|.-+...+ +.+.||||+-+|+..
T Consensus 280 n~~~~~-vr~~l~~~~~~W~~~~~iDG~R~D~~~ 312 (633)
T PRK12313 280 DLGKNE-VRSFLISSALFWLDEYHLDGLRVDAVS 312 (633)
T ss_pred CCCCHH-HHHHHHHHHHHHHHHhCCcEEEEcChh
Confidence 344565 55555445555 466899999999654
No 56
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provi
Probab=43.47 E-value=2.7e+02 Score=31.15 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=18.5
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 004090 285 SGLKHVVDESKQNHNVK-YVYVWHA 308 (774)
Q Consensus 285 ~GLk~~v~~Ik~~~Glk-~vgvWha 308 (774)
.||+.+++.+|+ +|-+ .+=+||+
T Consensus 77 ~~~~~l~~~vh~-~g~~~~~QL~h~ 100 (353)
T cd02930 77 AGHRLITDAVHA-EGGKIALQILHA 100 (353)
T ss_pred HHHHHHHHHHHH-cCCEEEeeccCC
Confidence 499999999999 7855 4567885
No 57
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=42.70 E-value=2.8e+02 Score=33.11 Aligned_cols=34 Identities=29% Similarity=0.513 Sum_probs=25.1
Q ss_pred CccChHHHHHHHHHHHHHHHhcCCCEEEEccccch
Q 004090 357 GLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNII 391 (774)
Q Consensus 357 glv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l 391 (774)
.+-+|+ ++++..+..+++.+.||||+-+|+-..+
T Consensus 165 n~~np~-v~~~i~~~~~~W~~~giDGfRlDa~~~i 198 (543)
T TIGR02403 165 NWENPE-VREELKDVVNFWRDKGVDGFRLDVINLI 198 (543)
T ss_pred CCCCHH-HHHHHHHHHHHHHHcCCCEEEEeeehhh
Confidence 344665 5555566777887899999999987765
No 58
>PLN00196 alpha-amylase; Provisional
Probab=41.01 E-value=4.4e+02 Score=30.57 Aligned_cols=83 Identities=17% Similarity=0.327 Sum_probs=50.0
Q ss_pred CcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCCc
Q 004090 194 PSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSK 273 (774)
Q Consensus 194 P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~K 273 (774)
..++.+|=|.+|..=+. .-++|.+.|+.|++.|+. .| |-.+-.... ...|+.- ..+.++. +.+
T Consensus 25 ~v~~Q~F~W~~~~~~gg--~~~~i~~kldyL~~LGvt--aI-----WL~P~~~s~------s~hGY~~-~D~y~ld-~~~ 87 (428)
T PLN00196 25 QVLFQGFNWESWKQNGG--WYNFLMGKVDDIAAAGIT--HV-----WLPPPSHSV------SEQGYMP-GRLYDLD-ASK 87 (428)
T ss_pred CEEEEeeccCCCCCCCc--CHHHHHHHHHHHHHcCCC--EE-----EeCCCCCCC------CCCCCCc-cccCCCC-ccc
Confidence 46788898999876432 457799999999999987 22 222211110 0011211 1122221 246
Q ss_pred ccccccCCCCCCChHHHHHHHHhcCCCc
Q 004090 274 FQKKCQNSEQVSGLKHVVDESKQNHNVK 301 (774)
Q Consensus 274 Fp~~~~~~~~~~GLk~~v~~Ik~~~Glk 301 (774)
|-+. ..|+.+|+.+|+ .|||
T Consensus 88 fGt~-------~elk~Lv~~aH~-~GIk 107 (428)
T PLN00196 88 YGNE-------AQLKSLIEAFHG-KGVQ 107 (428)
T ss_pred CCCH-------HHHHHHHHHHHH-CCCE
Confidence 6532 479999999999 6998
No 59
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=40.17 E-value=7.2e+02 Score=31.15 Aligned_cols=65 Identities=12% Similarity=0.069 Sum_probs=40.4
Q ss_pred ccChHHHHHHHHHHHHHH-HhcCCCEEEEccccchhhcc------------CCCCCch-hHHHHHHHHHHHHHHhcCCCC
Q 004090 358 LVHPKKVFNFYNELHAYL-ASCGVDGVKVDVQNIIETLG------------AGHGGRV-SLTRSYHQALEASIARNFPDN 423 (774)
Q Consensus 358 lv~p~~~~~fyd~~~~~L-as~GVD~VKvD~q~~l~~l~------------~~~~g~~-~l~~ay~~AL~~s~~~~f~g~ 423 (774)
+-+++ +++|.-+..+|+ .+.+|||+.+|+...+-++. +..++.+ ..+-.|-+-+...+.+.+|+.
T Consensus 362 ~~~~e-Vr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~~ 440 (758)
T PLN02447 362 YGNWE-VLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEA 440 (758)
T ss_pred CCCHH-HHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCCe
Confidence 34554 666766666665 56899999999876653321 1123322 234557777777777777754
No 60
>PRK13523 NADPH dehydrogenase NamA; Provisional
Probab=38.24 E-value=4.9e+02 Score=29.12 Aligned_cols=28 Identities=7% Similarity=0.105 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHH---HHHhcCCCEEEEccc
Q 004090 361 PKKVFNFYNELHA---YLASCGVDGVKVDVQ 388 (774)
Q Consensus 361 p~~~~~fyd~~~~---~Las~GVD~VKvD~q 388 (774)
.++++++-++|.. ...++|+|+|.+-+-
T Consensus 134 ~eeI~~ii~~f~~aA~~a~~aGfDgVeih~a 164 (337)
T PRK13523 134 KEQIKETVLAFKQAAVRAKEAGFDVIEIHGA 164 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 4666666666644 567799999999865
No 61
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=36.96 E-value=2.1e+02 Score=31.29 Aligned_cols=23 Identities=26% Similarity=0.551 Sum_probs=17.9
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 004090 285 SGLKHVVDESKQNHNVK-YVYVWHA 308 (774)
Q Consensus 285 ~GLk~~v~~Ik~~~Glk-~vgvWha 308 (774)
.++|.+++.+|+ +|-+ .+=+||+
T Consensus 77 ~~~~~~~~~vh~-~g~~~~~Ql~h~ 100 (327)
T cd02803 77 PGLRKLTEAVHA-HGAKIFAQLAHA 100 (327)
T ss_pred HHHHHHHHHHHh-CCCHhhHHhhCC
Confidence 489999999999 6843 3457886
No 62
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=36.37 E-value=2.3e+02 Score=30.94 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCc---hhHHHHHHHHHHHHHHhcCCCCcEEeeccC
Q 004090 360 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGR---VSLTRSYHQALEASIARNFPDNGCISCMCH 431 (774)
Q Consensus 360 ~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~---~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~ 431 (774)
+|+.-+.|-+++.+++...|+|||-+|+... . ....+ +.+.+..+++|.+..++. ...+.+.+++-
T Consensus 89 ~~~~R~~fi~siv~~l~~~~fDGidiDWE~P----~-~~~d~~n~~~ll~elr~~l~~~~~~~-~~~~~~ls~av 157 (299)
T cd02879 89 DPTARKAFINSSIKVARKYGFDGLDLDWEFP----S-SQVEMENFGKLLEEWRAAVKDEARSS-GRPPLLLTAAV 157 (299)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceeecccCC----C-ChhHHHHHHHHHHHHHHHHHHHhhcc-CCCcEEEEeec
Confidence 4677889999999999999999999998752 1 11112 345555666665322111 11346666664
No 63
>PF15016 DUF4520: Domain of unknown function (DUF4520)
Probab=35.86 E-value=1e+02 Score=27.78 Aligned_cols=50 Identities=20% Similarity=0.278 Sum_probs=38.0
Q ss_pred eEEEEEEEeeceeEEEEcCCCceeEECCeEeeEEEe----CCceeEEEEccCCc
Q 004090 713 ATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYD----SATGLMTMTLPVPE 762 (774)
Q Consensus 713 ~~v~v~vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~----~~~gl~t~~l~~~~ 762 (774)
+.-+..+-|.|+|-||+-.+=+.+-.|+......|+ .+.+.+++.+|-++
T Consensus 6 v~~e~~i~~~GrF~AysDgrVr~~F~Drt~L~l~~~~~~~~~~~~c~l~~pDG~ 59 (85)
T PF15016_consen 6 VLEESSIPGVGRFTAYSDGRVRVHFDDRTILTLIWNFSSREELGWCKLTFPDGQ 59 (85)
T ss_pred eEEEEecCCceEEEEEcCCeEEEEEcCCCEEEEEeCCCCcccCCEEEEEccCCC
Confidence 345667789999999999999999999999999882 12366666655443
No 64
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain. TMADH is an iron-sulfur flavoprotein that catalyzes the oxidative demethylation of trimethylamine to form dimethylamine and formaldehyde. The protein forms a symetrical dimer with each subunit containing one 4Fe-4S cluster and one FMN cofactor. It contains a unique flavin, in the form of a 6-S-cysteinyl FMN which is bent by ~25 degrees along the N5-N10 axis of the flavin isoalloxazine ring. This modification of the conformation of the flavin is thought to facilitate catalysis.The closely related histamine dehydrogenase catalyzes oxidative deamination of histamine.
Probab=32.30 E-value=7.8e+02 Score=27.80 Aligned_cols=23 Identities=22% Similarity=0.489 Sum_probs=18.9
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 004090 285 SGLKHVVDESKQNHNVK-YVYVWHA 308 (774)
Q Consensus 285 ~GLk~~v~~Ik~~~Glk-~vgvWha 308 (774)
.||+.+++.+|+ +|-+ .+=+||+
T Consensus 83 ~~~~~l~~~vh~-~G~~i~~QL~H~ 106 (370)
T cd02929 83 RNLAAMTDAVHK-HGALAGIELWHG 106 (370)
T ss_pred HHHHHHHHHHHH-CCCeEEEecccC
Confidence 499999999998 7855 4567887
No 65
>PRK14839 undecaprenyl pyrophosphate synthase; Provisional
Probab=32.04 E-value=2.5e+02 Score=30.10 Aligned_cols=19 Identities=11% Similarity=0.377 Sum_probs=13.2
Q ss_pred hHHHHHHHHhcCCCcEEEEE
Q 004090 287 LKHVVDESKQNHNVKYVYVW 306 (774)
Q Consensus 287 Lk~~v~~Ik~~~Glk~vgvW 306 (774)
++.+++...+ +|||++.++
T Consensus 42 l~~i~~~c~~-~GI~~lTvY 60 (239)
T PRK14839 42 IRRVVEAAPD-LGIGTLTLY 60 (239)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 3445666666 899998775
No 66
>KOG2500 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.92 E-value=31 Score=36.19 Aligned_cols=34 Identities=29% Similarity=0.493 Sum_probs=29.2
Q ss_pred cceEEecCCCCeeeEEecCC-cEEEEEEeeeeeec
Q 004090 625 SGEVVRLPKGASVPVTLKVL-EYELFHFCPLKEIS 658 (774)
Q Consensus 625 sg~~~~l~~~~~~~v~L~~~-~~ei~t~~Pv~~~~ 658 (774)
+|++.++.++....+.|+.+ ..|+|.-|||.++.
T Consensus 43 tGrlrvvakg~~~~ikLeD~tsg~LfA~c~id~~~ 77 (253)
T KOG2500|consen 43 TGRLRVVAKGERCEIKLEDKTSGELFAQCPIDEGP 77 (253)
T ss_pred cceeEEEEcCcEEEEEeccCCchhhhhhCcccCCC
Confidence 77888888899999999976 48999999998764
No 67
>PLN02784 alpha-amylase
Probab=30.08 E-value=9.7e+02 Score=30.55 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=47.0
Q ss_pred ccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCc-cCCcc
Q 004090 196 FLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK-ENSKF 274 (774)
Q Consensus 196 ~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~n~KF 274 (774)
++.+|=|.+|.. ..--.+|.+.++.|++.|+. .|-| ..-.... ...|++ -.++. -+.+|
T Consensus 505 mlQgF~Wds~~d---g~w~~~I~ekldyL~~LG~t--aIWL-----pP~~~s~------s~~GY~----p~D~y~lds~y 564 (894)
T PLN02784 505 LCQGFNWESHKS---GRWYMELGEKAAELSSLGFT--VVWL-----PPPTESV------SPEGYM----PKDLYNLNSRY 564 (894)
T ss_pred EEEeEEcCcCCC---CchHHHHHHHHHHHHHhCCC--EEEe-----CCCCCCC------CCCCcC----cccccccCcCc
Confidence 456777777653 12257889999999999987 3322 2221100 001222 12222 35677
Q ss_pred cccccCCCCCCChHHHHHHHHhcCCCc
Q 004090 275 QKKCQNSEQVSGLKHVVDESKQNHNVK 301 (774)
Q Consensus 275 p~~~~~~~~~~GLk~~v~~Ik~~~Glk 301 (774)
-.. ..|+.+|+.+|+ .||+
T Consensus 565 GT~-------~ELk~LI~a~H~-~GIk 583 (894)
T PLN02784 565 GTI-------DELKDLVKSFHE-VGIK 583 (894)
T ss_pred CCH-------HHHHHHHHHHHH-CCCE
Confidence 643 479999999999 7998
No 68
>PRK14833 undecaprenyl pyrophosphate synthase; Provisional
Probab=30.06 E-value=2.3e+02 Score=30.16 Aligned_cols=39 Identities=18% Similarity=0.332 Sum_probs=22.8
Q ss_pred ccEEEecCCCCCCCccchhhHHHHHHhhhhhccCCCCCCCcccc
Q 004090 442 TAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFH 485 (774)
Q Consensus 442 ~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~PDwDMf~ 485 (774)
-.++|+|...= .--...++++|.-++.-...|||....+
T Consensus 176 DLlIRTsGE~R-----LSnFLlWQ~ayaElyF~~~lWPdf~~~d 214 (233)
T PRK14833 176 DLLIRTGGEMR-----LSNFLLWQSSYAELFFTPILWPDFTPKD 214 (233)
T ss_pred CEEEECCCCcc-----ccccHHHHHhceeEEECCCCCCcCCHHH
Confidence 34567776321 1112246667777777777888876554
No 69
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=28.86 E-value=6e+02 Score=28.15 Aligned_cols=23 Identities=9% Similarity=0.201 Sum_probs=18.6
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 004090 285 SGLKHVVDESKQNHNVK-YVYVWHA 308 (774)
Q Consensus 285 ~GLk~~v~~Ik~~~Glk-~vgvWha 308 (774)
.||+.+++.+|+ +|-+ .+=+||+
T Consensus 82 ~~~~~l~~~vh~-~G~~~~~Ql~h~ 105 (338)
T cd04733 82 EAFREWAAAAKA-NGALIWAQLNHP 105 (338)
T ss_pred HHHHHHHHHHHh-cCCEEEEEccCC
Confidence 499999999999 8965 4556884
No 70
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=28.85 E-value=1.4e+02 Score=33.23 Aligned_cols=63 Identities=19% Similarity=0.395 Sum_probs=41.3
Q ss_pred CChHHHHHHHHHHHHHHhccccccccccCCccccccccccccc-ccccCCHHHHHHHHHHHHhCCCC
Q 004090 165 PNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDA-FYTDVTAEGVDEGLKSLSAGGTP 230 (774)
Q Consensus 165 ~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWda-f~~~vte~~I~~~l~~L~~~Gi~ 230 (774)
.+||++++++++..++.+..... ..+-+| |+..|.. +|-. .+...+++.|.+.++++.+.|+.
T Consensus 242 ~~PY~~v~~~~~~~~~~~~~~~~-~~~~RP-WlQ~Ft~-~~~~~~~~~Yg~~ev~aQI~A~~d~g~~ 305 (316)
T PF13200_consen 242 LEPYEIVYRSLKRAKERLRGLEG-PAIIRP-WLQDFTA-SWLGKNYKEYGPEEVRAQIQALKDAGIE 305 (316)
T ss_pred cChHHHHHHHHHHHHHHhhcCCC-CCeEec-ccccccc-cccccCccccCHHHHHHHHHHHHHcCCC
Confidence 57999999999877776554311 112222 3332211 3322 25678999999999999999987
No 71
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX
Probab=27.45 E-value=7.7e+02 Score=27.48 Aligned_cols=146 Identities=12% Similarity=0.157 Sum_probs=85.8
Q ss_pred cccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCC
Q 004090 207 AFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSG 286 (774)
Q Consensus 207 af~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~G 286 (774)
.||..-+++.+.+.++-+++.||. .++++=-|+... +|. +
T Consensus 50 GyYdl~~p~v~~~Q~~lA~~~GI~--gF~~~~Ywf~gk-------------------~lL--e----------------- 89 (345)
T PF14307_consen 50 GYYDLRDPEVMEKQAELAKEYGID--GFCFYHYWFNGK-------------------RLL--E----------------- 89 (345)
T ss_pred CcccCCCHHHHHHHHHHHHHhCCC--EEEEEeeecCCc-------------------hHH--H-----------------
Confidence 466667889999999999999998 999999998321 121 1
Q ss_pred hHHHHHHHHh-cCCCcEEEEE--eecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccccCCccChHH
Q 004090 287 LKHVVDESKQ-NHNVKYVYVW--HALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKK 363 (774)
Q Consensus 287 Lk~~v~~Ik~-~~Glk~vgvW--hal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~ 363 (774)
+++-..+.. +..+++.-+| |.....|-|.....-..++ +.+.++
T Consensus 90 -~p~~~~l~~~~~d~pFcl~WAN~~w~~~w~g~~~~~l~~q~--------------------------------y~~~~d 136 (345)
T PF14307_consen 90 -KPLENLLASKEPDFPFCLCWANENWTRRWDGRNNEILIEQK--------------------------------YSGEDD 136 (345)
T ss_pred -HHHHHHHhcCCCCCcEEEEECCChhhhccCCCCcccccccc--------------------------------CCchhH
Confidence 222112222 2348877788 6666777665222111010 112356
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHh-cCCCCcEEeecc
Q 004090 364 VFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIAR-NFPDNGCISCMC 430 (774)
Q Consensus 364 ~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~-~f~g~~iI~cMs 430 (774)
..+|++.+..++++- -|+|||..-.+-.... +.....+.+.+.|.+.+.+ -++|--+|.+..
T Consensus 137 ~~~~~~~l~~~F~D~--rYikVdGKPv~~Iy~p---~~~pd~~~~~~~wr~~a~~~G~~giyii~~~~ 199 (345)
T PF14307_consen 137 WKEHFRYLLPYFKDP--RYIKVDGKPVFLIYRP---GDIPDIKEMIERWREEAKEAGLPGIYIIAVQG 199 (345)
T ss_pred HHHHHHHHHHHhCCC--CceeECCEEEEEEECc---ccccCHHHHHHHHHHHHHHcCCCceEEEEEec
Confidence 678888888888754 5899999765432221 1123344555555544444 344444555554
No 72
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=26.91 E-value=2.1e+02 Score=28.74 Aligned_cols=65 Identities=18% Similarity=0.270 Sum_probs=41.1
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeeccCC
Q 004090 360 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHN 432 (774)
Q Consensus 360 ~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~ 432 (774)
+++..+.|.+.+.+++...|+|||-+|+...- ..+. .....|...|+ .+++.|+..+.+-+++..
T Consensus 85 ~~~~~~~f~~~~~~~v~~~~~DGidiD~E~~~------~~~~-~~~~~~~~ll~-~lr~~l~~~~~~ls~a~~ 149 (210)
T cd00598 85 DPASRAAFANSLVSFLKTYGFDGVDIDWEYPG------AADN-SDRENFITLLR-ELRSALGAANYLLTIAVP 149 (210)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCceEEeeeCCC------CcCc-cHHHHHHHHHH-HHHHHhcccCcEEEEEec
Confidence 46778899999999999999999999986631 1110 11233333333 344555543566666643
No 73
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=26.67 E-value=5.1e+02 Score=29.35 Aligned_cols=29 Identities=10% Similarity=0.186 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHHH---HHHhcCCCEEEEcccc
Q 004090 361 PKKVFNFYNELHA---YLASCGVDGVKVDVQN 389 (774)
Q Consensus 361 p~~~~~fyd~~~~---~Las~GVD~VKvD~q~ 389 (774)
.++++++-++|.. ...++|+|+|-+-+.+
T Consensus 136 ~~eI~~ii~~f~~AA~~a~~aGfDgVeih~ah 167 (361)
T cd04747 136 EADIDDVIAAFARAAADARRLGFDGIELHGAH 167 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 4566666666543 5577899999998765
No 74
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=25.17 E-value=2.5e+02 Score=30.82 Aligned_cols=30 Identities=17% Similarity=0.369 Sum_probs=27.0
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 004090 360 HPKKVFNFYNELHAYLASCGVDGVKVDVQN 389 (774)
Q Consensus 360 ~p~~~~~fyd~~~~~Las~GVD~VKvD~q~ 389 (774)
+++..+.|-+++.+++.+.|+|||=+|+.+
T Consensus 106 ~~~~r~~Fi~siv~~l~~~~fDGidiDwE~ 135 (322)
T cd06548 106 TEASRAKFADSAVDFIRKYGFDGIDIDWEY 135 (322)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEECCcC
Confidence 467778899999999999999999999875
No 75
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.90 E-value=1.1e+03 Score=27.30 Aligned_cols=142 Identities=15% Similarity=0.170 Sum_probs=75.0
Q ss_pred cCCHHHHHHHHHHHHhCCCCCcEEEE-ecccccccCCCCcccchhhccccccccccCCCccCC-cccccccCCCCCCChH
Q 004090 211 DVTAEGVDEGLKSLSAGGTPPKFLII-DDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENS-KFQKKCQNSEQVSGLK 288 (774)
Q Consensus 211 ~vte~~I~~~l~~L~~~Gi~~~~vII-DDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~-KFp~~~~~~~~~~GLk 288 (774)
-.+++++.+.++.|.+.|+..-|+.| =||---.. +. ..-+..+. .+.. ...+-+=|+
T Consensus 60 ~~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lyp--------------S~----~~p~s~~~~~~~~---~~~g~DpLa 118 (418)
T COG1649 60 LFQRQELKDILDDLQKLNFNTVYPQVWNDGDALYP--------------SA----VLPWSDGLPGVLG---VDPGYDPLA 118 (418)
T ss_pred cccHHHHHHHHHHHHHcCCceeEEEEecCcccccc--------------cc----ccccccCcCcccC---CCCCCChHH
Confidence 46889999999999999999766555 22221100 00 00111110 0000 011113478
Q ss_pred HHHHHHHhcCCCcEEEEEeecccccCCcCC-CCcccccccccccccCCCCCCCCCCCcceeccccccc---CCccCh--H
Q 004090 289 HVVDESKQNHNVKYVYVWHALAGYWGGVKP-AADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG---LGLVHP--K 362 (774)
Q Consensus 289 ~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P-~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~g---lglv~p--~ 362 (774)
.+|++.|+ .||+ |--|..... +.| .+++.+.+... .....|++.... ..| ..+.|| .
T Consensus 119 ~~I~~AHk-r~l~-v~aWf~~~~----~a~~~s~~~~~~p~~---------~~~~~~~~~~~~--~~~~~~~~~ldPg~P 181 (418)
T COG1649 119 FVIAEAHK-RGLE-VHAWFNPYR----MAPPTSPLTKRHPHW---------LTTKRPGWVYVR--HQGWGKRVWLDPGIP 181 (418)
T ss_pred HHHHHHHh-cCCe-eeechhhcc----cCCCCChhHhhCCCC---------cccCCCCeEEEe--cCCceeeeEeCCCCh
Confidence 88999998 5999 878877632 333 22322222111 111223332111 111 123343 4
Q ss_pred HHHHHHHHHHHH-HHhcCCCEEEEccccc
Q 004090 363 KVFNFYNELHAY-LASCGVDGVKVDVQNI 390 (774)
Q Consensus 363 ~~~~fyd~~~~~-Las~GVD~VKvD~q~~ 390 (774)
++++|+-++..- ...+-||++-.|.-+.
T Consensus 182 evq~~i~~lv~evV~~YdvDGIQfDd~fy 210 (418)
T COG1649 182 EVQDFITSLVVEVVRNYDVDGIQFDDYFY 210 (418)
T ss_pred HHHHHHHHHHHHHHhCCCCCceecceeec
Confidence 577777666555 4679999999998664
No 76
>PLN02960 alpha-amylase
Probab=22.92 E-value=5.6e+02 Score=32.61 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=38.5
Q ss_pred CccChHHHHHHHHHHHHH-HHhcCCCEEEEccccchhhccCCC---CC---------chhHHHHHHHHHHHHHHhcCCCC
Q 004090 357 GLVHPKKVFNFYNELHAY-LASCGVDGVKVDVQNIIETLGAGH---GG---------RVSLTRSYHQALEASIARNFPDN 423 (774)
Q Consensus 357 glv~p~~~~~fyd~~~~~-Las~GVD~VKvD~q~~l~~l~~~~---~g---------~~~l~~ay~~AL~~s~~~~f~g~ 423 (774)
.+-+| .++.|.-+-..| |.+.+|||+-+|+...+.++..+. .| .-.-+-.|-+-|...+.+.+++.
T Consensus 527 Ny~~~-eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~~~~~n~~~d~~Ai~fL~~lN~~v~~~~P~v 605 (897)
T PLN02960 527 KYGDH-EVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDLDEYCNQYVDRDALIYLILANEMLHQLHPNI 605 (897)
T ss_pred CCCCH-HHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCcccccCCccCCchHHHHHHHHHHHHHhhCCCe
Confidence 34445 456666555555 568999999999876654432110 01 11224445666666666666644
Q ss_pred cEE
Q 004090 424 GCI 426 (774)
Q Consensus 424 ~iI 426 (774)
-+|
T Consensus 606 ilI 608 (897)
T PLN02960 606 ITI 608 (897)
T ss_pred EEE
Confidence 333
No 77
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=22.89 E-value=3.5e+02 Score=30.37 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=27.9
Q ss_pred cChHHHHHHHHHHHHHHHhcCCCEEEEccccc
Q 004090 359 VHPKKVFNFYNELHAYLASCGVDGVKVDVQNI 390 (774)
Q Consensus 359 v~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~ 390 (774)
.+|+.-+.|-+++.+++.+.|+|||-+|+.+.
T Consensus 92 ~~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p 123 (358)
T cd02875 92 SNPTYRTQWIQQKVELAKSQFMDGINIDIEQP 123 (358)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCeEEEcccCC
Confidence 35677778999999999999999999999763
No 78
>PLN02411 12-oxophytodienoate reductase
Probab=22.50 E-value=4.2e+02 Score=30.28 Aligned_cols=23 Identities=26% Similarity=0.553 Sum_probs=18.8
Q ss_pred CChHHHHHHHHhcCCCc-EEEEEee
Q 004090 285 SGLKHVVDESKQNHNVK-YVYVWHA 308 (774)
Q Consensus 285 ~GLk~~v~~Ik~~~Glk-~vgvWha 308 (774)
.||+.+++.||+ +|-| .+=+||+
T Consensus 87 ~~~~~l~~avH~-~G~~i~~QL~H~ 110 (391)
T PLN02411 87 EAWKKVVDAVHA-KGSIIFCQLWHV 110 (391)
T ss_pred HHHHHHHHHHHh-cCCEEEEeccCC
Confidence 499999999999 7855 4568886
No 79
>PLN02361 alpha-amylase
Probab=22.31 E-value=1.2e+03 Score=26.75 Aligned_cols=81 Identities=20% Similarity=0.204 Sum_probs=49.1
Q ss_pred CCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccCC
Q 004090 193 LPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENS 272 (774)
Q Consensus 193 ~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~ 272 (774)
...++.+|=|.+|+. ---++|.+.++.|++.|+. .|-| .+-.... . ..|++- ..+. .-+.
T Consensus 11 ~~v~lQ~F~W~~~~~----~~w~~i~~kl~~l~~lG~t--~iwl-----~P~~~~~---~---~~GY~~-~d~y--~~~~ 70 (401)
T PLN02361 11 REILLQAFNWESHKH----DWWRNLEGKVPDLAKSGFT--SAWL-----PPPSQSL---A---PEGYLP-QNLY--SLNS 70 (401)
T ss_pred CcEEEEEEeccCCcc----HHHHHHHHHHHHHHHcCCC--EEEe-----CCCCcCC---C---CCCCCc-cccc--ccCc
Confidence 456778888887642 1347899999999999987 3322 2221110 0 011211 1121 2356
Q ss_pred cccccccCCCCCCChHHHHHHHHhcCCCc
Q 004090 273 KFQKKCQNSEQVSGLKHVVDESKQNHNVK 301 (774)
Q Consensus 273 KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk 301 (774)
+|.+. ..|+.+|+.+|+ .|||
T Consensus 71 ~~Gt~-------~el~~li~~~h~-~gi~ 91 (401)
T PLN02361 71 AYGSE-------HLLKSLLRKMKQ-YNVR 91 (401)
T ss_pred ccCCH-------HHHHHHHHHHHH-cCCE
Confidence 67643 479999999999 6998
No 80
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=21.49 E-value=6.7e+02 Score=32.08 Aligned_cols=45 Identities=16% Similarity=0.161 Sum_probs=27.3
Q ss_pred ChHHHHHHHHHHHHH-HHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHH
Q 004090 360 HPKKVFNFYNELHAY-LASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEA 414 (774)
Q Consensus 360 ~p~~~~~fyd~~~~~-Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~ 414 (774)
+| .+++|.-+...+ +.+.||||+-+|....+. .+..+.+++++.+
T Consensus 470 ~~-~Vrk~iiDsl~~W~~ey~VDGFRfDlm~~~~---------~~f~~~~~~~l~~ 515 (898)
T TIGR02103 470 HR-MMAKLIVDSLVVWAKDYKVDGFRFDLMGHHP---------KAQMLAAREAIKA 515 (898)
T ss_pred CH-HHHHHHHHHHHHHHHHcCCCEEEEechhhCC---------HHHHHHHHHHHHH
Confidence 45 455555555555 468999999999865321 2344555555553
No 81
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=21.38 E-value=1.7e+02 Score=31.33 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcccc
Q 004090 362 KKVFNFYNELHAYLASCGVDGVKVDVQN 389 (774)
Q Consensus 362 ~~~~~fyd~~~~~Las~GVD~VKvD~q~ 389 (774)
.-++.|.+++.+++..+|+|||-+|+..
T Consensus 96 ~~~~~fv~S~~~~l~~~~fDGiDiDwE~ 123 (253)
T cd06544 96 SWVSNAVSSLTSIIQTYNLDGIDIDYEH 123 (253)
T ss_pred hHHHHHHHHHHHHHHHhCCCceeeeccc
Confidence 3456789999999999999999999976
No 82
>PLN03244 alpha-amylase; Provisional
Probab=21.06 E-value=9.1e+02 Score=30.55 Aligned_cols=62 Identities=11% Similarity=0.102 Sum_probs=36.9
Q ss_pred ChHHHHHHHHHHHHH-HHhcCCCEEEEccccchhhccCCC-----------CC-chhHHHHHHHHHHHHHHhcCCC
Q 004090 360 HPKKVFNFYNELHAY-LASCGVDGVKVDVQNIIETLGAGH-----------GG-RVSLTRSYHQALEASIARNFPD 422 (774)
Q Consensus 360 ~p~~~~~fyd~~~~~-Las~GVD~VKvD~q~~l~~l~~~~-----------~g-~~~l~~ay~~AL~~s~~~~f~g 422 (774)
+| .+++|.-+-..| +.+.+|||+-+|+...+-++.-+. .. .-..+-.|.+-+...+.+.+|+
T Consensus 505 ~~-EVr~FLLsna~yWleEyhIDGFRfDaVtSMLY~d~G~~~f~g~~~~y~n~~~d~dAv~fL~laN~~ih~~~P~ 579 (872)
T PLN03244 505 DL-DVLHFLISNLNWWITEYQIDGFQFHSLASMIYTHNGFASFNGDLDDYCNQYVDKDALMYLILANEILHALHPK 579 (872)
T ss_pred CH-HHHHHHHHHHHHHHHHhCcCcceeecchhheeeccccccccCCccccccccCCchHHHHHHHHHHHHHHhCCC
Confidence 45 466666655555 568999999999875543322110 00 0122445666667777777775
Done!