BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004092
(774 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D5USX8|MSHA_TSUPD D-inositol 3-phosphate glycosyltransferase OS=Tsukamurella
paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117
/ NBRC 16120 / NCTC 13040) GN=mshA PE=3 SV=1
Length = 438
Score = 40.0 bits (92), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 324 VRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS 383
R ++G PD+LV+ VG ++ L+LRA PL + + I+++++
Sbjct: 223 ARRELGIAPDELVLTFVGRIQPHKA----PDLLLRAAAPL-----IHAHPDRRIRILVVG 273
Query: 384 GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE-----GDVDSVLNTADVVIYGSFLEEQTF 438
G S + IA L LG+ + E + V +D+V+ S+ E +F
Sbjct: 274 GPSGTGLERPDALIA--LARELGIEHAVTFEPPRPPAGLAEVYRASDLVVVPSYSE--SF 329
Query: 439 PEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKI 494
+ V+A P++A + + V D V+G L + + T ++ ++ N ++
Sbjct: 330 GLVAVEAQACGTPVVAAKVGGLSVAVADGVSGRLIDGHDPQEWTAVLDELTANAEL 385
>sp|D5UJ42|MSHA_CELFN D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas
flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS
134) GN=mshA PE=3 SV=1
Length = 443
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 363 LFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGV-----VKHMAAEGDV 417
L V V S P+ ++++ G + + V E A L LGV V+ A ++
Sbjct: 276 LVQAVGVLRASGRPVPLLVVLGGPSGRPTAVRELRA--LAVTLGVDDDVVVRPPAPRDEL 333
Query: 418 DSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKEN 477
S AD+V S ++F + V+A P++A D+ +R V+D V+G L P +
Sbjct: 334 VSWYRAADLVAMPS--RSESFGLVAVEAQASGTPVLAADVGGLRTVVEDDVSGRLVPGHD 391
Query: 478 IKALTHIILQVI 489
+ +I +
Sbjct: 392 PQVWAEVIADAL 403
>sp|O07147|PIMA_MYCLE GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol
mannosyltransferase OS=Mycobacterium leprae (strain TN)
GN=pimA PE=3 SV=1
Length = 374
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 406 GVVKHMAAEGDVD-----SVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI 460
G+V+H+ G VD + + +ADV + E +F +LV+A+ P++A DL
Sbjct: 240 GLVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGE-SFGIVLVEAMAAGTPVVASDLDAF 298
Query: 461 RKYVDDRVNGYLFPKEN 477
R+ + D G+L P +
Sbjct: 299 RRVLRDGEVGHLVPAGD 315
>sp|Q4A5V9|SYG_MYCS5 Glycine--tRNA ligase OS=Mycoplasma synoviae (strain 53) GN=glyQS
PE=3 SV=1
Length = 451
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 448 FRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRR 507
F P+I ++N ++Y D+V LFP EN+ +TH +Q ++ + + +
Sbjct: 84 FNDPLIENKINN-KRYRADKVIEELFPNENVAKMTHEQMQEFLQKNVTSYDNSKCAWSEI 142
Query: 508 SVKNLMALETIEG 520
NLM ET +G
Sbjct: 143 KKFNLM-FETFQG 154
>sp|Q9UPY6|WASF3_HUMAN Wiskott-Aldrich syndrome protein family member 3 OS=Homo sapiens
GN=WASF3 PE=1 SV=2
Length = 502
Score = 33.9 bits (76), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 598 TDDSFLYDIWKEE--KDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDL 655
TD S+ +D+WKE+ +D E KRR++E+ RID GT EV K+ +A+N
Sbjct: 152 TDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQ--KRID---GTTREV----KKVRKARNRR 202
Query: 656 HE 657
E
Sbjct: 203 QE 204
>sp|Q46638|AMSK_ERWAM Amylovoran biosynthesis glycosyltransferase AmsK OS=Erwinia
amylovora GN=amsK PE=3 SV=2
Length = 407
Score = 33.5 bits (75), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 416 DVDSVLNTADVVIYGSFL----EEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGY 471
++ L+ AD+ + S + + P L++A+ P+++ + S I + ++ V+G+
Sbjct: 292 EIKRYLDEADIFLLPSLTAADGDMEGIPVALMEAMAVGLPVVSSEHSGIPELIEHNVSGW 351
Query: 472 LFPKENIKALTHIILQV 488
L P+ + +AL I+L++
Sbjct: 352 LAPEGDAQALAAILLRL 368
>sp|Q65CC7|KANE_STRKN Glycosyltransferase KanE OS=Streptomyces kanamyceticus GN=kanE PE=1
SV=1
Length = 386
Score = 33.1 bits (74), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 417 VDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFP 474
+ S+++ ++V+ S EE ++++ + R+P++A D++ + K ++D G + P
Sbjct: 277 IPSMISLGELVVLPSRYEELGI--VILECMTMRRPLVAHDVNGVNKLIEDGTTGIVVP 332
>sp|O05083|Y1698_HAEIN Uncharacterized glycosyltransferase HI_1698 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1698 PE=3 SV=1
Length = 353
Score = 33.1 bits (74), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 408 VKHMAAEGDVDSVLN----TADVVIYGS-----FLEEQT--FPEILVKALCFRKPIIAPD 456
+K++A D++ +N T DV Y L QT P ++++A+ F PI+A +
Sbjct: 227 LKNLAKALDIEDSVNFIPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFN 286
Query: 457 LS-NIRKYVDDRVNGYLFPKENIKALTHIILQVITN 491
S +++ V+ + NG+L + NI+ + + +I N
Sbjct: 287 CSPGVKQLVEHKENGFLCEQNNIEEMVKGLDLLINN 322
>sp|Q8S403|PHO1_ARATH Phosphate transporter PHO1 OS=Arabidopsis thaliana GN=PHO1 PE=2
SV=1
Length = 782
Score = 33.1 bits (74), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 21/146 (14%)
Query: 542 KELSPKLKEEWQWHLFEAFLN------STHEDRTSRSNRFLNQIELLQSNHTERDSYLPV 595
KEL +L EW+ EAF+N + +TSR + + + + R + PV
Sbjct: 6 KELEAQLIPEWK----EAFVNYCLLKKQIKKIKTSRKPKPASHYPIGHHSDFGRSLFDPV 61
Query: 596 PETDDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGT--------WDEVYRSAKR 647
+ +F ++ + E+L VR+RR E D +D+ + T DEV R
Sbjct: 62 RKLARTFSDKLFSNSEKPEILQVRRRRGSSETGDDVDEIYQTELVQLFSEEDEVKVFFAR 121
Query: 648 ADR---AKNDLHERDEGELERTGQPL 670
D N H+ E E G+ L
Sbjct: 122 LDEELNKVNQFHKPKETEFLERGEIL 147
>sp|Q8VHI6|WASF3_MOUSE Wiskott-Aldrich syndrome protein family member 3 OS=Mus musculus
GN=Wasf3 PE=2 SV=1
Length = 501
Score = 33.1 bits (74), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 598 TDDSFLYDIWKEE--KDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDL 655
TD S+ +D+WKE+ +D E KRR++E+ R+D GT EV K+ +A+N
Sbjct: 152 TDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQ--KRVD---GTTREV----KKVRKARNRR 202
Query: 656 HE 657
E
Sbjct: 203 QE 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 290,527,162
Number of Sequences: 539616
Number of extensions: 12749956
Number of successful extensions: 32525
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 32489
Number of HSP's gapped (non-prelim): 69
length of query: 774
length of database: 191,569,459
effective HSP length: 125
effective length of query: 649
effective length of database: 124,117,459
effective search space: 80552230891
effective search space used: 80552230891
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)